HHsearch alignment for GI: 254781050 and conserved domain: TIGR02717
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain; InterPro: IPR014089 This group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which they have been characterised , , . In most species this protein is bifunctional, existing as fused alpha-beta domains. In Pyrococcus and related species, however, the domains exist as separate polypeptides. This entry represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. One of these (along with its beta-domain partner) was characterised as ACS-II showing specificity for phenylacetyl-CoA . This entry excludes non-ACS-I paralogs. .
Probab=100.00 E-value=0 Score=494.33 Aligned_cols=278 Identities=27% Similarity=0.359 Sum_probs=243.6
Q ss_pred CEEEEECCCEEEEECCC---CHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCC-CCCCCCHHHH-CCCCCCCEEE
Q ss_conf 95677179739998888---43779999999862698189976589988687277457-7531407850-3578863688
Q gi|254781050|r 1 MSILVDKNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN-VPVFTTVAEA-KERTAANASV 75 (300)
Q Consensus 1 msil~~~~t~vivqGit---g~~g~~~~~~~~~y~gt~ivagV~Pgkgg~~~~g~~~~-iPvy~sv~ea-~~~~~~D~av 75 (300)
T Consensus 1 L~~Lf~P~S-vAVIGAS~~~gKVGy~i~~NL~~~Gy~G~~YPVNpk~-~i----~i~Gr~k~Y~~~~~~dP~~--VDLAV 72 (457)
T TIGR02717 1 LEKLFNPKS-VAVIGASRDEGKVGYAIMKNLIEGGYKGKIYPVNPKA-GI----EILGRVKAYPSVLEIDPDE--VDLAV 72 (457)
T ss_pred CCCCCCCCC-EEEECCCCCCCCCCHHHHEEEECCCCEEEEEEECCCC-CE----EEEECCCCCCCHHHCCCCC--CCEEE
T ss_conf 952318871-5897124889851002200000378303687622788-71----4630114578711148997--34799
Q ss_pred EECCHHHHHHHHHHHHHCCCCEEEEECCCCCH------HHHHHHHHHHHCCCCEEEECCCCEEECCCCHHCCEEC-CCCC
Q ss_conf 62120456788999985399589980588468------8899999984017718940685101355510002001-1235
Q gi|254781050|r 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP-GSIF 148 (300)
Q Consensus 76 I~VP~~~v~dai~Ea~~agik~iviiteGip~------~d~~~l~~~A~~~g~riiGPNc~Gii~p~~~~lgi~p-~~~~ 148 (300)
T Consensus 73 ivvPa~~vp~v~eECG~KGVkg~vvI~AGF~E~G~eG~~LE~~l~~~a~kYg~Rl~GPNclG~~nt~-~~lNAtFA~~~p 151 (457)
T TIGR02717 73 IVVPAKLVPQVVEECGEKGVKGAVVITAGFKEVGEEGAELEQKLVEIARKYGMRLLGPNCLGIINTE-IKLNATFAPTMP 151 (457)
T ss_pred EECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCC-HHHHHCCCCCCC
T ss_conf 9728567999999986179518999714864531678999999999997678817767362258144-021100135788
Q ss_pred CCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHH
Q ss_conf 77867999805414789999999719951676405567446789999999997399872889997058724899999999
Q gi|254781050|r 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 (300)
Q Consensus 149 ~pG~VgivSqSG~l~~e~~~~~~~~g~G~S~~VsiG~D~~~G~~~~d~L~~~~~Dp~T~~Ivl~gEiGG~~E~~aa~fi~ 228 (300)
T Consensus 152 ~~G~Iaf~SQSGAl~~a~Ldwa~~~~vGfS~~VS~GNkAD~--~e~Dlley~~~D~~T~~I~~Y~E--g~~--DG~~Fl~ 225 (457)
T TIGR02717 152 KKGGIAFISQSGALLTALLDWAEKNGVGFSYFVSLGNKADI--DESDLLEYLADDPDTKVILLYLE--GIK--DGRKFLK 225 (457)
T ss_pred CCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEC--CHHHHHHHHHCCCCCCEEEEECC--CCC--CHHHHHH
T ss_conf 98877789712589999999998727813477826741111--65778889853989408999717--870--4168999
Q ss_pred HHHHCCCCCCEEEEEEEECCCCCC--CCCEEEEECCCCCCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHC
Q ss_conf 864226755268998430157655--32200112248888999999999988975788989999999999843
Q gi|254781050|r 229 DEAKRGRKKPIVGFVAGKTAPPGR--TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 (300)
Q Consensus 229 ~~~~~~~~KPVva~~~GrtAp~g~--~~gHaGAi~~~~~g~a~~k~~al~~aGv~v~~s~~el~~~l~~~l~~ 299 (300)
T Consensus 226 ~A~~~s~~KPiv~lKsG~s-~~GakAA~SHTGaLA----Gs~~~y~aaf~q~G~iRa~~~~ELfd~-A~~L~~ 292 (457)
T TIGR02717 226 TAKEISKKKPIVVLKSGTS-EAGAKAASSHTGALA----GSDEAYDAAFKQAGVIRADSIEELFDL-ARLLSN 292 (457)
T ss_pred HHHHHHHCCCEEEEECCCC-HHHHHHHHHCCCHHH----HHHHHHHHHHCCCCEEEEECHHHHHHH-HHHHHC
T ss_conf 9888630598899936888-345676521023133----668999987430143887017788999-999835