HHsearch alignment for GI: 254781050 and conserved domain: cd05313
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=93.52 E-value=0.66 Score=26.10 Aligned_cols=46 Identities=20% Similarity=0.357 Sum_probs=33.4
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCC
Q ss_conf 79739998888437799999998626981899765899886872774577
Q gi|254781050|r 7 KNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNV 56 (300)
Q Consensus 7 ~~t~vivqGitg~~g~~~~~~~~~y~gt~ivagV~Pgkgg~~~~g~~~~i 56 (300)
T Consensus 37 ~g~~vaIQGf-GnVG~~aA~~l~e~-GakvVa-VsD~~G~-i~~~~Gld~ 82 (254)
T cd05313 37 KGKRVAISGS-GNVAQYAAEKLLEL-GAKVVT-LSDSKGY-VYDPDGFTG 82 (254)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHC-CCEEEE-EECCCCE-EECCCCCCH
T ss_conf 8999999897-79999999999977-997999-9857850-887999988