HHsearch alignment for GI: 254781050 and conserved domain: pfam03447
>pfam03447 NAD_binding_3 Homoserine dehydrogenase, NAD binding domain. This domain adopts a Rossmann NAD binding fold. The C-terminal domain of homoserine dehydrogenase contributes a single helix to this structural domain, which is not included in the Pfam model.
Probab=93.30 E-value=0.72 Score=25.87 Aligned_cols=105 Identities=14% Similarity=0.084 Sum_probs=67.5
Q ss_pred CHHHHHHHHHHHHHC---CCCEEEEECCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCC
Q ss_conf 437799999998626---98189976589988687277457753140785035788636886212045678899998539
Q gi|254781050|r 18 GKAGTFHTEQAILYC---QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE 94 (300)
Q Consensus 18 g~~g~~~~~~~~~y~---gt~ivagV~Pgkgg~~~~g~~~~iPvy~sv~ea~~~~~~D~avI~VP~~~v~dai~Ea~~ag 94 (300)
T Consensus 3 G~VG~~v~~~l~~~~~~~~~~l~~v~~r~~~~~~~~~~~~~~~~~~d~~~ll~~~~iDvVVE~~g~~~~~~~~~~aL~~G 82 (116)
T pfam03447 3 GAIGSGLLELLLRQQEEIPLELVAVADRDLLSKARAALLGDEPVTLDLDDLVADPRPDVVVECASSEAVAEYVLKALKAG 82 (116)
T ss_pred CCHHHHHHHHHHHCCCCCCEEEEEEEECCHHHCCCCCCCCCCEEECCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCC
T ss_conf 70289999999949203567999998478343232124666715779999961889989998899489999999999879
Q ss_pred CCEEEEECCCC---CHH-HHHHHHHHHHCCCCEEE
Q ss_conf 95899805884---688-89999998401771894
Q gi|254781050|r 95 IPLIVCITEGI---PVL-DMVRVKARLEKSSSRLI 125 (300)
Q Consensus 95 ik~iviiteGi---p~~-d~~~l~~~A~~~g~rii 125 (300)
T Consensus 83 kh---VVTaNK~~lA~~~~~~eL~~~A~~~g~~~~ 114 (116)
T pfam03447 83 KH---VVTASKGALADLALRERLREAAEASGVRVY 114 (116)
T ss_pred CE---EEEECHHHHCCHHHHHHHHHHHHHCCCEEE
T ss_conf 98---999078896785799999999998399697