HHsearch results for GI: 254781050 and protein with PDBid: 1f06_A
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.18 E-value=1e-05 Score=55.41 Aligned_cols=113 Identities=11% Similarity=0.073 Sum_probs=80.1
Q ss_pred CCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCC--CHHHHCCCCCCCEEEEECCHHHHHH
Q ss_conf 97399988884377999999986269818997658998868727745775314--0785035788636886212045678
Q gi|254781050|r 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT--TVAEAKERTAANASVIYVPPSGAGD 85 (300)
Q Consensus 8 ~t~vivqGitg~~g~~~~~~~~~y~gt~ivagV~Pgkgg~~~~g~~~~iPvy~--sv~ea~~~~~~D~avI~VP~~~v~d 85 (300)
+-||.|.| +|+-|+.|.+......+-++|+-+...+.- . ...|+|+ +..++.+ ++|+.+++.|+....+
T Consensus 3 ~irv~ivG-~G~iG~~~~~~l~~~~~~elv~v~~r~~~~---~---~~~~v~~~~d~~~~~~--~~Dvvii~tp~~~~~~ 73 (320)
T 1f06_A 3 NIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATL---D---TKTPVFDVADVDKHAD--DVDVLFLCMGSATDIP 73 (320)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCC---S---SSSCEEEGGGGGGTTT--TCSEEEECSCTTTHHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCEEEEEEECCHHH---C---CCCCCCCHHHHHHHCC--CCCEEEECCCCCCCHH
T ss_conf 55799988-089999999999709997999999688676---7---6888645177997405--7999998789716899
Q ss_pred HHHHHHHCCCCEEEEECC-CCCHHHHHHHHHHHHCCCC-EEEECCC
Q ss_conf 899998539958998058-8468889999998401771-8940685
Q gi|254781050|r 86 AIIESIEAEIPLIVCITE-GIPVLDMVRVKARLEKSSS-RLIGPNC 129 (300)
Q Consensus 86 ai~Ea~~agik~iviite-Gip~~d~~~l~~~A~~~g~-riiGPNc 129 (300)
.+.+|+++|+..+..... +.+.....++.+.|++.|. .++|.|.
T Consensus 74 ~~~~~l~~G~~VV~~~~~~~~~~e~~~~l~~aA~~~g~~~v~~~g~ 119 (320)
T 1f06_A 74 EQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGNVALVSTGW 119 (320)
T ss_dssp HHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTCEEECSCSB
T ss_pred HHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 9999998699999828875658789999999999739769994675