HHsearch results for GI: 254781050 and protein with PDBid: 1vm6_A
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, JCSG, protein structure initiative, PSI; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=97.77 E-value=0.00046 Score=44.88 Aligned_cols=105 Identities=12% Similarity=0.096 Sum_probs=81.0
Q ss_pred ECCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCEEEEECCHHHHHH
Q ss_conf 17973999888843779999999862698189976589988687277457753140785035788636886212045678
Q gi|254781050|r 6 DKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGD 85 (300)
Q Consensus 6 ~~~t~vivqGitg~~g~~~~~~~~~y~gt~ivagV~Pgkgg~~~~g~~~~iPvy~sv~ea~~~~~~D~avI~VP~~~v~d 85 (300)
...=||.|-|.+||.|+.-.+...+. +-.+|+++.+.. . +..+ .+|+.|-|.+|..+.+
T Consensus 10 ~~~mKI~I~G~~GrMG~~I~~~~~~~-~~~lv~~id~~~-----------~-------~~l~--~~DVvIDFS~p~~~~~ 68 (228)
T 1vm6_A 10 HHHMKYGIVGYSGRMGQEIQKVFSEK-GHELVLKVDVNG-----------V-------EELD--SPDVVIDFSSPEALPK 68 (228)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEEETTE-----------E-------EECS--CCSEEEECSCGGGHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHCC-CCEEEEEECCCC-----------H-------HHHC--CCCEEEECCCCHHHHH
T ss_conf 67878999999997999999999769-995999978883-----------7-------6725--9999998988303355
Q ss_pred HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCC-CEEE
Q ss_conf 89999853995899805884688899999984017718940685-1013
Q gi|254781050|r 86 AIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGIL 133 (300)
Q Consensus 86 ai~Ea~~agik~iviiteGip~~d~~~l~~~A~~~g~riiGPNc-~Gii 133 (300)
.+.-|.+.+++ +|+=|-|+...+..++.+++++..+ ++-||- +|+.
T Consensus 69 ~l~~~~~~~~p-lViGTTG~~~~~~~~l~~~~~~~~i-~~a~NfSlGv~ 115 (228)
T 1vm6_A 69 TVDLCKKYRAG-LVLGTTALKEEHLQMLRELSKEVPV-VQAYNFSIGIN 115 (228)
T ss_dssp HHHHHHHHTCE-EEECCCSCCHHHHHHHHHHTTTSEE-EECSCCCHHHH
T ss_pred HHHHHHHCCCC-EEEEECCCCHHHHHHHHHHHCCCCE-EECCCHHHHHH
T ss_conf 68999863876-4998068887899999998241887-60540748999