HHsearch results for GI: 254781050 and protein with PDBid: 1vm6_A

>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, JCSG, protein structure initiative, PSI; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=97.77  E-value=0.00046  Score=44.88  Aligned_cols=105  Identities=12%  Similarity=0.096  Sum_probs=81.0

Q ss_pred             ECCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCEEEEECCHHHHHH
Q ss_conf             17973999888843779999999862698189976589988687277457753140785035788636886212045678
Q gi|254781050|r    6 DKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGD   85 (300)
Q Consensus         6 ~~~t~vivqGitg~~g~~~~~~~~~y~gt~ivagV~Pgkgg~~~~g~~~~iPvy~sv~ea~~~~~~D~avI~VP~~~v~d   85 (300)
                      ...=||.|-|.+||.|+.-.+...+. +-.+|+++.+..           .       +..+  .+|+.|-|.+|..+.+
T Consensus        10 ~~~mKI~I~G~~GrMG~~I~~~~~~~-~~~lv~~id~~~-----------~-------~~l~--~~DVvIDFS~p~~~~~   68 (228)
T 1vm6_A           10 HHHMKYGIVGYSGRMGQEIQKVFSEK-GHELVLKVDVNG-----------V-------EELD--SPDVVIDFSSPEALPK   68 (228)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEEETTE-----------E-------EECS--CCSEEEECSCGGGHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHCC-CCEEEEEECCCC-----------H-------HHHC--CCCEEEECCCCHHHHH
T ss_conf             67878999999997999999999769-995999978883-----------7-------6725--9999998988303355


Q ss_pred             HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCC-CEEE
Q ss_conf             89999853995899805884688899999984017718940685-1013
Q gi|254781050|r   86 AIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGIL  133 (300)
Q Consensus        86 ai~Ea~~agik~iviiteGip~~d~~~l~~~A~~~g~riiGPNc-~Gii  133 (300)
                      .+.-|.+.+++ +|+=|-|+...+..++.+++++..+ ++-||- +|+.
T Consensus        69 ~l~~~~~~~~p-lViGTTG~~~~~~~~l~~~~~~~~i-~~a~NfSlGv~  115 (228)
T 1vm6_A           69 TVDLCKKYRAG-LVLGTTALKEEHLQMLRELSKEVPV-VQAYNFSIGIN  115 (228)
T ss_dssp             HHHHHHHHTCE-EEECCCSCCHHHHHHHHHHTTTSEE-EECSCCCHHHH
T ss_pred             HHHHHHHCCCC-EEEEECCCCHHHHHHHHHHHCCCCE-EECCCHHHHHH
T ss_conf             68999863876-4998068887899999998241887-60540748999