HHsearch results for GI: 254781050 and protein with PDBid: 2csu_A

>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii OT3} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=100.00  E-value=0  Score=402.17  Aligned_cols=273  Identities=23%  Similarity=0.350  Sum_probs=233.9

Q ss_pred             CEEEEECCCEEEEECCCCH---HHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCEEEEE
Q ss_conf             9567717973999888843---7799999998626981899765899886872774577531407850357886368862
Q gi|254781050|r    1 MSILVDKNTKVLVQGLTGK---AGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY   77 (300)
Q Consensus         1 msil~~~~t~vivqGitg~---~g~~~~~~~~~y~gt~ivagV~Pgkgg~~~~g~~~~iPvy~sv~ea~~~~~~D~avI~   77 (300)
                      |.-|++..| |.|-|.+.+   .|....++.+++ ++.-+..|||+.  .++.|    +|+|+|++|.++.  +|++||+
T Consensus         2 L~~Lf~P~S-IAvVGaS~~~~~~g~~~~~~l~~~-~~G~i~~Vnp~~--~~i~G----~~~y~sl~dlp~~--~Dlavi~   71 (457)
T 2csu_A            2 LDYFFNPKG-IAVIGASNDPKKLGYEVFKNLKEY-KKGKVYPVNIKE--EEVQG----VKAYKSVKDIPDE--IDLAIIV   71 (457)
T ss_dssp             CCTTTSCSE-EEEETCCSCTTSHHHHHHHHHTTC-CSSEEEEECSSC--SEETT----EECBSSTTSCSSC--CSEEEEC
T ss_pred             CHHHCCCCE-EEEECCCCCCCCCHHHHHHHHHHC-CCCCEEEECCCC--CEECC----EECCCCHHHCCCC--CCEEEEE
T ss_conf             045279986-999886799986189999999857-996099978998--70798----7687998886999--8989999


Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEECCCCCH------HHHHHHHHHHHCCCCEEEECCCCEEECCCCHHCCEECCCCCCCC
Q ss_conf             120456788999985399589980588468------88999999840177189406851013555100020011235778
Q gi|254781050|r   78 VPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG  151 (300)
Q Consensus        78 VP~~~v~dai~Ea~~agik~iviiteGip~------~d~~~l~~~A~~~g~riiGPNc~Gii~p~~~~lgi~p~~~~~pG  151 (300)
                      ||++++++++.||+++|+|.++|+|+||++      +++++++++|+++|+|++||||+|+++|. .++.+.+...++||
T Consensus        72 vp~~~v~~~~~e~~~~gv~~~vi~s~Gf~e~~~~g~~~~~~l~~~a~~~g~riiGPNc~G~i~~~-~~~~~~~~~~~~~G  150 (457)
T 2csu_A           72 VPKRFVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIGPNCVGIMNTH-VDLNATFITVAKKG  150 (457)
T ss_dssp             SCHHHHHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEECSSCCEEEEGG-GTEEEESSCCCEEC
T ss_pred             ECHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCC-CCCCCCCCCCCCCC
T ss_conf             57788899999999759988997166665322212468999999887569779636866630663-12466544316999


Q ss_pred             CEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             67999805414789999999719951676405567446789999999997399872889997058724899999999864
Q gi|254781050|r  152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA  231 (300)
Q Consensus       152 ~VgivSqSG~l~~e~~~~~~~~g~G~S~~VsiG~D~~~G~~~~d~L~~~~~Dp~T~~Ivl~gEiGG~~E~~aa~fi~~~~  231 (300)
                      +||+|||||++++++++|+.++|+|||++||+||+.  ++++.|+|+||.+||+|++|++|.|-.+.    ..+|++.++
T Consensus       151 ~ialvsqSG~l~~~i~~~~~~~g~G~s~~vs~Gn~~--~v~~~d~l~~l~~D~~t~~I~l~~E~~~~----~~~f~~aa~  224 (457)
T 2csu_A          151 NVAFISQSGALGAGIVYKTIKEDIGFSKFISVGNMA--DVDFAELMEYLADTEEDKAIALYIEGVRN----GKKFMEVAK  224 (457)
T ss_dssp             SEEEEESCHHHHHHHHHHHHHTTCEESEEEECTTCC--SSCHHHHHHHHTTCSSCCEEEEEESCCSC----HHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCC--CCCHHHHHHHHCCCCCCCEEEEEEECCCC----HHHHHHHHH
T ss_conf             779996672599999999996488814898348867--87889999996069987479999955755----789999999


Q ss_pred             HCCCCCCEEEEEEEECCCCCC-CCCEEEEECCCCCCCHHHHHHHHHHCCCEECCCHHHHHHHHH
Q ss_conf             226755268998430157655-322001122488889999999999889757889899999999
Q gi|254781050|r  232 KRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV  294 (300)
Q Consensus       232 ~~~~~KPVva~~~GrtAp~g~-~~gHaGAi~~~~~g~a~~k~~al~~aGv~v~~s~~el~~~l~  294 (300)
                      +...+||||++|.|||.+..+ ..+|||+++    ++...+.++|||+|++++++++||.+.++
T Consensus       225 ~a~~~kpvvvlk~Grs~~g~~aa~shtgala----g~~~~~~a~~~~~Gvv~v~~~~el~d~~~  284 (457)
T 2csu_A          225 RVTKKKPIIALKAGKSESGARAASSHTGSLA----GSWKIYEAAFKQSGVLVANTIDEMLSMAR  284 (457)
T ss_dssp             HHHHHSCEEEEECC----------------------CHHHHHHHHHHTTCEEESSHHHHHHHHT
T ss_pred             HHHCCCCEEEEECCCCCCCCCCCCCCCCCCC----CHHHHHHHHHHHCCCCCCCCHHHHHHHHH
T ss_conf             9866899899957777655322135554345----73899999999559872799999999999