HHsearch results for GI: 254781050 and protein with PDBid: 2csu_A
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii OT3} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=98.42 E-value=4.2e-06 Score=57.90 Aligned_cols=130 Identities=15% Similarity=0.285 Sum_probs=88.1
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHCCCCEEEE---------------EECCC--CCCC---CCCHHHHHHHHHCCCCCCEE
Q ss_conf 7867999805414789999999719951676---------------40556--7446---78999999999739987288
Q gi|254781050|r 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTA---------------VGIGG--DPVK---GTEFIDVLELFLADEATESI 209 (300)
Q Consensus 150 pG~VgivSqSG~l~~e~~~~~~~~g~G~S~~---------------VsiG~--D~~~---G~~~~d~L~~~~~Dp~T~~I 209 (300)
-.+++++|-||+++..+++.+.+.|+-+... .+..| |... ...|.+.++.+.+||++++|
T Consensus 293 g~rvaivs~sGG~~~l~aD~~~~~Gl~l~~ls~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~dp~vD~v 372 (457)
T 2csu_A 293 GNKVAIMTNAGGPGVLTADELDKRGLKLATLEEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQDPNVDML 372 (457)
T ss_dssp SSEEEEEESCHHHHHHHHHHHHTTTCEECCCCHHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHHSTTCSEE
T ss_pred CCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCEE
T ss_conf 98189997781688999999998599858999999999862155655776975388999999999999999739997989
Q ss_pred EEEEECC----CHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEECCC
Q ss_conf 9997058----724899999999864226755268998430157655322001122488889999999999889757889
Q gi|254781050|r 210 VMVGEIG----GSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 (300)
Q Consensus 210 vl~gEiG----G~~E~~aa~fi~~~~~~~~~KPVva~~~GrtAp~g~~~gHaGAi~~~~~g~a~~k~~al~~aGv~v~~s 285 (300)
+++.-+. ....+.+...++..++...+|||++...|... .+.-...|+++|+.+-++
T Consensus 373 l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~kPvv~~~~g~~~-------------------~~~~~~~l~~~Gip~f~~ 433 (457)
T 2csu_A 373 IAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFMAGYV-------------------SEKAKELLEKNGIPTYER 433 (457)
T ss_dssp EEEEECCCSTTCCSSHHHHHHHHHHHHHCCCCCEEEEEECTTT-------------------THHHHHHHHTTTCCEESS
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCC-------------------HHHHHHHHHHCCCCCCCC
T ss_conf 9997478656787479999999999984899978999789766-------------------099999998689986799
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 8999999999984
Q gi|254781050|r 286 PARIGRSLVELLG 298 (300)
Q Consensus 286 ~~el~~~l~~~l~ 298 (300)
|++-...++.++.
T Consensus 434 pe~a~~Al~~l~~ 446 (457)
T 2csu_A 434 PEDVASAAYALVE 446 (457)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999