HHsearch results for GI: 254781050 and protein with PDBid: 2dt5_A

>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, thermus themophilus; HET: NAD; 2.16A {Thermus thermophilus HB8} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.65  E-value=0.00021  Score=47.00  Aligned_cols=94  Identities=15%  Similarity=0.136  Sum_probs=72.7

Q ss_pred             EECCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEE--CCCCCCEEECCCCCCCCCCCC--HHHHCCCCCCCEEEEECCH
Q ss_conf             717973999888843779999999862698189976--589988687277457753140--7850357886368862120
Q gi|254781050|r    5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGI--HPKKGSTYWTGGNVNVPVFTT--VAEAKERTAANASVIYVPP   80 (300)
Q Consensus         5 ~~~~t~vivqGitg~~g~~~~~~~~~y~gt~ivagV--~Pgkgg~~~~g~~~~iPvy~s--v~ea~~~~~~D~avI~VP~   80 (300)
                      .|+..+|++.|. |+.|+.-+.+...-.+-++||.+  +|.|-|++..|    +|||..  +++..++ .++.+++.+|+
T Consensus        77 ~~~~~~v~I~Ga-G~~G~~L~~~~~~~~~~~ivgf~DdDp~k~G~~I~G----i~V~~~~~l~~~i~~-~i~iaI~avp~  150 (211)
T 2dt5_A           77 LNRKWGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGRPVRG----GVIEHVDLLPQRVPG-RIEIALLTVPR  150 (211)
T ss_dssp             TTSCEEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEETT----EEEEEGGGHHHHSTT-TCCEEEECSCH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCCEEEEEEECCHHHCCCEECC----EEECCHHHHHHHHHH-CCEEEEECCCH
T ss_conf             998851899878-889999998463257956999996985880998788----788768999999983-66178524998


Q ss_pred             HHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             456788999985399589980588
Q gi|254781050|r   81 SGAGDAIIESIEAEIPLIVCITEG  104 (300)
Q Consensus        81 ~~v~dai~Ea~~agik~iviiteG  104 (300)
                      ..+.+.+.++.++|||.+.=++..
T Consensus       151 ~~~q~i~d~l~~~gIk~Ilnfa~~  174 (211)
T 2dt5_A          151 EAAQKAADLLVAAGIKGILNFAPV  174 (211)
T ss_dssp             HHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             HHHHHHHHHHHHCCCCEEEECCCE
T ss_conf             999999999998499487355873