HHsearch results for GI: 254781050 and protein with PDBid: 2dt5_A
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, thermus themophilus; HET: NAD; 2.16A {Thermus thermophilus HB8} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.65 E-value=0.00021 Score=47.00 Aligned_cols=94 Identities=15% Similarity=0.136 Sum_probs=72.7
Q ss_pred EECCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEE--CCCCCCEEECCCCCCCCCCCC--HHHHCCCCCCCEEEEECCH
Q ss_conf 717973999888843779999999862698189976--589988687277457753140--7850357886368862120
Q gi|254781050|r 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGI--HPKKGSTYWTGGNVNVPVFTT--VAEAKERTAANASVIYVPP 80 (300)
Q Consensus 5 ~~~~t~vivqGitg~~g~~~~~~~~~y~gt~ivagV--~Pgkgg~~~~g~~~~iPvy~s--v~ea~~~~~~D~avI~VP~ 80 (300)
.|+..+|++.|. |+.|+.-+.+...-.+-++||.+ +|.|-|++..| +|||.. +++..++ .++.+++.+|+
T Consensus 77 ~~~~~~v~I~Ga-G~~G~~L~~~~~~~~~~~ivgf~DdDp~k~G~~I~G----i~V~~~~~l~~~i~~-~i~iaI~avp~ 150 (211)
T 2dt5_A 77 LNRKWGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGRPVRG----GVIEHVDLLPQRVPG-RIEIALLTVPR 150 (211)
T ss_dssp TTSCEEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEETT----EEEEEGGGHHHHSTT-TCCEEEECSCH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCCEEEEEEECCHHHCCCEECC----EEECCHHHHHHHHHH-CCEEEEECCCH
T ss_conf 998851899878-889999998463257956999996985880998788----788768999999983-66178524998
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 456788999985399589980588
Q gi|254781050|r 81 SGAGDAIIESIEAEIPLIVCITEG 104 (300)
Q Consensus 81 ~~v~dai~Ea~~agik~iviiteG 104 (300)
..+.+.+.++.++|||.+.=++..
T Consensus 151 ~~~q~i~d~l~~~gIk~Ilnfa~~ 174 (211)
T 2dt5_A 151 EAAQKAADLLVAAGIKGILNFAPV 174 (211)
T ss_dssp HHHHHHHHHHHHHTCCEEEECSSS
T ss_pred HHHHHHHHHHHHCCCCEEEECCCE
T ss_conf 999999999998499487355873