HHsearch results for GI: 254781050 and protein with PDBid: 2nu8_A
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, rossmann fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=100.00 E-value=0 Score=626.32 Aligned_cols=288 Identities=58% Similarity=0.935 Sum_probs=276.3
Q ss_pred EEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCEEEEECCHH
Q ss_conf 56771797399988884377999999986269818997658998868727745775314078503578863688621204
Q gi|254781050|r 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPS 81 (300)
Q Consensus 2 sil~~~~t~vivqGitg~~g~~~~~~~~~y~gt~ivagV~Pgkgg~~~~g~~~~iPvy~sv~ea~~~~~~D~avI~VP~~ 81 (300)
|||+|+||||+|||+|||+|+||+++|++| ||||||||||+|||+++.| +|||+||+|+++.+++|+++|+|||+
T Consensus 1 s~~~~~~t~v~v~G~tg~~g~~~~~~~~~y-gt~vv~gVnP~kgG~~v~G----~Pvy~sV~e~~~~~~~d~avI~VP~~ 75 (288)
T 2nu8_A 1 SILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFNTVREAVAATGATASVIYVPAP 75 (288)
T ss_dssp CCSCCTTCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTCEETT----EEEESSHHHHHHHHCCCEEEECCCGG
T ss_pred CEEECCCCEEEEECCCCCHHHHHHHHHHHH-CCCEEEEECCCCCCCEEEC----CCCCCCHHHHHHCCCCCEEEEECCHH
T ss_conf 967479983999888686879999999985-8967998679978636658----64658699986243875699714858
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCEEECCCCHHCCEECCCCCCCCCEEEEEECCC
Q ss_conf 56788999985399589980588468889999998401771894068510135551000200112357786799980541
Q gi|254781050|r 82 GAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGT 161 (300)
Q Consensus 82 ~v~dai~Ea~~agik~iviiteGip~~d~~~l~~~A~~~g~riiGPNc~Gii~p~~~~lgi~p~~~~~pG~VgivSqSG~ 161 (300)
+++|+++||+++|+|.+|||||||||+|+++++++|+++|+|+|||||+|+++|+..+++++|.+.++||+|+++||||+
T Consensus 76 ~v~~a~~e~~~~Gik~~viit~Gf~e~~~~~l~~~a~~~g~riiGPNc~Gii~p~~~~~~~~~~~~~~~G~i~~iSqSG~ 155 (288)
T 2nu8_A 76 FCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNTPGVITPGECKIGIQPGHIHKPGKVGIVSRSGT 155 (288)
T ss_dssp GHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSSCCEEEETTTEEEESSCTTSCCEEEEEEEESCHH
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEECCH
T ss_conf 99999999997799789996489871138999998752497897899766406436541778743357887238970341
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 47899999997199516764055674467899999999973998728899970587248999999998642267552689
Q gi|254781050|r 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 (300)
Q Consensus 162 l~~e~~~~~~~~g~G~S~~VsiG~D~~~G~~~~d~L~~~~~Dp~T~~Ivl~gEiGG~~E~~aa~fi~~~~~~~~~KPVva 241 (300)
|++++++|+.++|+|||++||+|||+++++++.|+|+||++||+|++|+||+|.+++.| +|++.+++...+||||+
T Consensus 156 l~~~i~~~~~~~giG~S~~vs~Gn~a~v~~~~~D~l~~l~~D~~T~~I~ly~E~~~~~~----~f~~~a~~~~~~KPVV~ 231 (288)
T 2nu8_A 156 LTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAE----EEAAAYIKEHVTKPVVG 231 (288)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHH----HHHHHHHHHHCCSCEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCHH----HHHHHHHHHHCCCCEEE
T ss_conf 79999998644599876898468775457539999999864668728999997368889----99999999865898799
Q ss_pred EEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHH
Q ss_conf 984301576553220011224888899999999998897578898999999999984
Q gi|254781050|r 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 (300)
Q Consensus 242 ~~~GrtAp~g~~~gHaGAi~~~~~g~a~~k~~al~~aGv~v~~s~~el~~~l~~~l~ 298 (300)
||+|||++.+++++|+||+++++.+++++|.++|||+|++++++++||.++++++|+
T Consensus 232 lk~Grsa~~~~a~~h~ga~~ag~~~~~~~~~aal~~aGv~~v~~~~el~~~lk~lL~ 288 (288)
T 2nu8_A 232 YIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 288 (288)
T ss_dssp EEECTTCCTTCCCSSTTCCCCTTCCCHHHHHHHHHHTTCEECSSGGGHHHHHHHHC-
T ss_pred EEECCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHC
T ss_conf 983466887665654545533887659999999997897582999999999999849