HHsearch results for GI: 254781050 and protein with PDBid: 2nu8_B
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, rossmann fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=97.52 E-value=0.0017 Score=41.17 Aligned_cols=164 Identities=18% Similarity=0.284 Sum_probs=108.9
Q ss_pred HHHHHHHCCCCEEEECCCCEEECCCC-----HHCCEE-------C-----------------------CCCCCCCCEEEE
Q ss_conf 99998401771894068510135551-----000200-------1-----------------------123577867999
Q gi|254781050|r 112 RVKARLEKSSSRLIGPNCPGILTPDS-----CKIGIM-------P-----------------------GSIFRKGSVGIL 156 (300)
Q Consensus 112 ~l~~~A~~~g~riiGPNc~Gii~p~~-----~~lgi~-------p-----------------------~~~~~pG~Vgiv 156 (300)
.|.+.-.+....++==|.+-+-.-++ +++.+- | ..+-..|+||++
T Consensus 183 ~Ly~~F~~~D~~llEINPLv~t~~g~l~aLDaK~~~DdnA~fR~~~~~~~~~~~~~~~~E~~a~~~~l~yv~ldG~Ig~m 262 (388)
T 2nu8_B 183 GLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCM 262 (388)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEETTSCEEESCCEEEECGGGGGGCHHHHHHCCGGGSCHHHHHHHHTTCEEEECSSSEEEE
T ss_pred HHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEE
T ss_conf 99999985676404555313558997899763532566500049244541476647976999876797632579738999
Q ss_pred EECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHH-HHHHH-HHHHHHHCC
Q ss_conf 8054147899999997199516764055674467899999999973998728899970587248-99999-999864226
Q gi|254781050|r 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE-EEAAQ-FLKDEAKRG 234 (300)
Q Consensus 157 SqSG~l~~e~~~~~~~~g~G~S~~VsiG~D~~~G~~~~d~L~~~~~Dp~T~~Ivl~gEiGG~~E-~~aa~-fi~~~~~~~ 234 (300)
.-.++|+...++.+...|---.-+.-+||.+-. ....++++.+..||+.++|++-- .||... .+.|+ .+++.+...
T Consensus 263 vnGaGlamaTmD~i~~~Gg~pANfld~gG~a~~-e~v~~a~kiil~d~~vk~iliNI-fGGI~rcd~vA~GIi~A~~~~~ 340 (388)
T 2nu8_B 263 VNGAGLAMGTMDIVKLHGGEPANFLDVGGGATK-ERVTEAFKIILSDDKVKAVLVNI-FGGIVRCDLIADGIIGAVAEVG 340 (388)
T ss_dssp ESSHHHHHHHHHHHHHTTCCBCEEEECCSCCCH-HHHHHHHHHHHTSTTCCEEEEEE-ESCSSCHHHHHHHHHHHHHHHT
T ss_pred ECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCH-HHHHHHHHHHHCCCCCCEEEEEE-ECCHHHHHHHHHHHHHHHHHCC
T ss_conf 658429999999999849984226873699978-99999999986599965899996-0764558999999999999709
Q ss_pred CCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCE--ECCCHHHHHHHHHHHH
Q ss_conf 75526899843015765532200112248888999999999988975--7889899999999998
Q gi|254781050|r 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC--IAPSPARIGRSLVELL 297 (300)
Q Consensus 235 ~~KPVva~~~GrtAp~g~~~gHaGAi~~~~~g~a~~k~~al~~aGv~--v~~s~~el~~~l~~~l 297 (300)
.++|||+-..|.....|+ +.|+++|+. .+++++|-.+...++.
T Consensus 341 ~~vpivVRl~Gtn~eeg~--------------------~il~~~gl~i~~~~~l~~Aa~~~V~~~ 385 (388)
T 2nu8_B 341 VNVPVVVRLEGNNAELGA--------------------KKLADSGLNIIAAKGLTDAAQQVVAAV 385 (388)
T ss_dssp CCSCEEEEEESTTHHHHH--------------------HHHHTTCSSEEECSSHHHHHHHHHHHT
T ss_pred CCCCEEEECCCCCHHHHH--------------------HHHHHCCCCEEECCCHHHHHHHHHHHH
T ss_conf 998789999989989999--------------------999978998687089999999999985