HHsearch results for GI: 254781050 and protein with PDBid: 3bf0_A
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=95.75 E-value=0.0095 Score=36.47 Aligned_cols=83 Identities=25% Similarity=0.320 Sum_probs=55.7
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEE-CCCHHH--HHHHHH
Q ss_conf 78679998054147899999997199516764055674467899999999973998728899970-587248--999999
Q gi|254781050|r 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE-IGGSAE--EEAAQF 226 (300)
Q Consensus 150 pG~VgivSqSG~l~~e~~~~~~~~g~G~S~~VsiG~D~~~G~~~~d~L~~~~~Dp~T~~Ivl~gE-iGG~~E--~~aa~f 226 (300)
...|++|.-+|++.. |-+..-++|.| ++.+.|+...+|++.|+|+|-.. .||... +..++.
T Consensus 300 ~~~Iavi~~~G~I~~-----------g~~~~~~~~~~-----~~~~~l~~a~~d~~vkavvLrInSpGGs~~as~~i~~~ 363 (593)
T 3bf0_A 300 GDSIGVVFANGAIMD-----------GEETQGNVGGD-----TTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAE 363 (593)
T ss_dssp SCEEEEEEEEEEEES-----------SSSCTTSEEHH-----HHHHHHHHHHHCTTEEEEEEEEEEEEECHHHHHHHHHH
T ss_pred CCCEEEEEEECCEEC-----------CCCCCCCCCCH-----HHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHH
T ss_conf 784059996342404-----------77767876617-----88999986650754217999997989857789999999
Q ss_pred HHHHHHCCCCCCEEEEEEEECCCC
Q ss_conf 998642267552689984301576
Q gi|254781050|r 227 LKDEAKRGRKKPIVGFVAGKTAPP 250 (300)
Q Consensus 227 i~~~~~~~~~KPVva~~~GrtAp~ 250 (300)
|+..++ ..|||+++..+..|..
T Consensus 364 i~~~k~--~~KPVv~~~~~~aASg 385 (593)
T 3bf0_A 364 LAAARA--AGKPVVVSMGGMAASG 385 (593)
T ss_dssp HHHHHH--TTCCEEEEEEEEEETH
T ss_pred HHHHHH--CCCCEEEEECCCCCHH
T ss_conf 999985--4997899987866415