HHsearch results for GI: 254781050 and protein with PDBid: 3mwd_B

>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=100.00  E-value=0  Score=665.65  Aligned_cols=297  Identities=28%  Similarity=0.433  Sum_probs=280.7

Q ss_pred             CEEEEECCCEEEEECCCCH--HHHHHHHHHHHHCCCCEEEEECCCCCCEEE----CCCCCCCCCCCCHHHHCCCC-CCCE
Q ss_conf             9567717973999888843--779999999862698189976589988687----27745775314078503578-8636
Q gi|254781050|r    1 MSILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKGSTYW----TGGNVNVPVFTTVAEAKERT-AANA   73 (300)
Q Consensus         1 msil~~~~t~vivqGitg~--~g~~~~~~~~~y~gt~ivagV~Pgkgg~~~----~g~~~~iPvy~sv~ea~~~~-~~D~   73 (300)
                      ||||+||||||||||+||+  ||+||+++|+.|++|||||||||+|||+.+    +.++++||||+||+||++++ ++|+
T Consensus         3 ~s~l~~~~t~~ivqg~~~~~~q~~~~~~~~~~~~~~~v~~~v~p~~g~~~~~~~~G~~~~~iPvy~sV~eA~~~~~~~d~   82 (334)
T 3mwd_B            3 STTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIPVFKNMADAMRKHPEVDV   82 (334)
T ss_dssp             CSCCCCTTCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEEETTEEEEEEEESSHHHHHHHCTTCCE
T ss_pred             CCEEECCCCEEEEECCCCCHHEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHCCCCCE
T ss_conf             22676699659998996775303110163001789988999808988864314588775288765889999985589768


Q ss_pred             EEEECCHHHHHHHHHHHHH-CCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCEEECCCCHHCC--------EEC
Q ss_conf             8862120456788999985-3995899805884688899999984017718940685101355510002--------001
Q gi|254781050|r   74 SVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMP  144 (300)
Q Consensus        74 avI~VP~~~v~dai~Ea~~-agik~iviiteGip~~d~~~l~~~A~~~g~riiGPNc~Gii~p~~~~lg--------i~p  144 (300)
                      ++|||||++++|+++||++ +|||++||||||||++|+++++++||++|+|||||||+|+|+|+.+++|        ++|
T Consensus        83 ~vi~VP~~~a~dai~Ea~~~agIk~iviIteGip~~d~~~l~~~A~~~girliGPNc~Gii~p~~~~ig~~~~~~~~i~p  162 (334)
T 3mwd_B           83 LINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILA  162 (334)
T ss_dssp             EEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHTCEEECSSCCCEEETTTEECTTTTCSHHHHHH
T ss_pred             EEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCEECCCCCCEEEECCCCCCCCC
T ss_conf             99926678799999999851799889998198988899999999986598889999851164665403440443244477


Q ss_pred             CCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHH
Q ss_conf             12357786799980541478999999971995167640556744678999999999739987288999705872489999
Q gi|254781050|r  145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA  224 (300)
Q Consensus       145 ~~~~~pG~VgivSqSG~l~~e~~~~~~~~g~G~S~~VsiG~D~~~G~~~~d~L~~~~~Dp~T~~Ivl~gEiGG~~E~~aa  224 (300)
                      .++++||+||+|||||+|+|+++++++++|+|||++||+|||+++|++|.|+|+||++||+|++|+||+|++|..|++++
T Consensus       163 ~~~~~~G~VgivSqSG~l~~ei~~~~~~~g~G~S~~VsiGnd~~~g~~~~D~L~~~~~Dp~Tk~Ivly~E~~g~~e~~~a  242 (334)
T 3mwd_B          163 SKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKIC  242 (334)
T ss_dssp             TTTTSCCSEEEEESCHHHHHHHHHHHHHHSSCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHHHHHH
T ss_pred             CCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHH
T ss_conf             55477874799965652899999999982998758980588875687499999986449998499998454783799999


Q ss_pred             HHHHHHHHCCCCCCEEEEEEEECC---CCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHCC
Q ss_conf             999986422675526899843015---7655322001122488889999999999889757889899999999998439
Q gi|254781050|r  225 QFLKDEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL  300 (300)
Q Consensus       225 ~fi~~~~~~~~~KPVva~~~GrtA---p~g~~~gHaGAi~~~~~g~a~~k~~al~~aGv~v~~s~~el~~~l~~~l~~l  300 (300)
                      +++++   ..++||||+||+||||   +++++|||||||++++.+++++|++||||||++++++|+||+++++++|.+|
T Consensus       243 ~~~k~---~~~~KPVVa~kaGrsa~~~~~~~~mgHtGAia~~~~gsa~~k~~al~~aGv~vv~~~~el~~~l~~~~~~l  318 (334)
T 3mwd_B          243 RGIKE---GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELGEIIQSVYEDL  318 (334)
T ss_dssp             HHHHT---TSCCSCEEEEEECTTCC----------------CGGGSHHHHHHHHHHTTCBCCSSGGGHHHHHHHHHHHH
T ss_pred             HHHHH---CCCCCCEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHH
T ss_conf             99985---58999889999732677788555553531203689889999999999879968799999999999999988