BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781050|ref|YP_003065463.1| succinyl-CoA synthetase subunit alpha [Candidatus Liberibacter asiaticus str. psy62] (300 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254781050|ref|YP_003065463.1| succinyl-CoA synthetase subunit alpha [Candidatus Liberibacter asiaticus str. psy62] gi|254040727|gb|ACT57523.1| succinyl-CoA synthetase subunit alpha [Candidatus Liberibacter asiaticus str. psy62] Length = 300 Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust. Identities = 300/300 (100%), Positives = 300/300 (100%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT Sbjct: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS Sbjct: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA Sbjct: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV Sbjct: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL Sbjct: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 >gi|315122388|ref|YP_004062877.1| succinyl-CoA synthetase subunit alpha [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495790|gb|ADR52389.1| succinyl-CoA synthetase subunit alpha [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 300 Score = 534 bits (1375), Expect = e-150, Method: Compositional matrix adjust. Identities = 265/300 (88%), Positives = 281/300 (93%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ+VGGIHPKKG T W GGNVNVPVF Sbjct: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQIVGGIHPKKGGTCWVGGNVNVPVFV 60 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEAKE T ANASVIYVPPSGAGDAIIESI+AEIPLIVCITEGIP LDMVRVKA LE S Sbjct: 61 SVAEAKEHTGANASVIYVPPSGAGDAIIESIKAEIPLIVCITEGIPFLDMVRVKAYLENS 120 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPG+LTP+ CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA Sbjct: 121 SSRLIGPNCPGVLTPEECKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKG+EFID+LELFLAD+ TESI+MVGEIGGSAEE+AA FLKDEAK GRKKP+V Sbjct: 181 VGIGGDPVKGSEFIDILELFLADKETESIIMVGEIGGSAEEDAANFLKDEAKCGRKKPVV 240 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GFVAGKTAPPGRTMGHAGAVI GG+G AEDKI AM+EAGI IA SPAR+G++LVELLG L Sbjct: 241 GFVAGKTAPPGRTMGHAGAVIYGGQGSAEDKIAAMQEAGIRIASSPARMGKTLVELLGGL 300 >gi|241206655|ref|YP_002977751.1| succinyl-CoA synthetase subunit alpha [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860545|gb|ACS58212.1| succinyl-CoA synthetase, alpha subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 300 Score = 488 bits (1255), Expect = e-136, Method: Compositional matrix adjust. Identities = 235/298 (78%), Positives = 271/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGAKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KE+T ANASVIYVPP+GA DAIIE+I+AEIP I CITEGIPV+DMVRVKARL++ Sbjct: 61 ATVAEGKEKTGANASVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLADEAT+SI+M+GEIGG+AEE+AAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADEATQSIIMIGEIGGAAEEDAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIKVSPSPARLGKTLVEVL 298 >gi|121602296|ref|YP_988363.1| succinyl-CoA synthetase subunit alpha [Bartonella bacilliformis KC583] gi|120614473|gb|ABM45074.1| succinyl-CoA synthetase alpha chain [Bartonella bacilliformis KC583] Length = 300 Score = 488 bits (1255), Expect = e-136, Method: Compositional matrix adjust. Identities = 236/298 (79%), Positives = 272/298 (91%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSIL++K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGI+PKKG WTG +P+F Sbjct: 1 MSILINKDTKVLVQGLTGKTGTFHTEQALAYHGTQMVGGINPKKGGETWTGAKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V E KE+T ANASVIYVPP+GA DAIIE+I+AEI LIVCITEGIPV+DMVRVKA+LEK Sbjct: 61 ASVTEGKEKTGANASVIYVPPAGAADAIIEAIKAEIDLIVCITEGIPVMDMVRVKAKLEK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGILTPD CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLIGPNCPGILTPDECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTSHEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEFIDVLE+FLAD+ TESIVM+GEIGGSAEEEAAQFLKDEAK+GRKKP+ Sbjct: 181 AIGIGGDPVKGTEFIDVLEMFLADDETESIVMIGEIGGSAEEEAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSP+++G++LV +L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPSQVGKTLVSVL 298 >gi|116254168|ref|YP_770006.1| succinyl-CoA synthetase subunit alpha [Rhizobium leguminosarum bv. viciae 3841] gi|115258816|emb|CAK09922.1| putative succinyl-CoA synthetase alpha chain [Rhizobium leguminosarum bv. viciae 3841] Length = 300 Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust. Identities = 234/298 (78%), Positives = 271/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGAKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KE+T ANA+VIYVPP+GA DAIIE+I+AEIP I CITEGIPV+DMVRVKARL++ Sbjct: 61 ATVAEGKEKTGANATVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLADEAT+SI+M+GEIGG+AEE+AAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADEATQSIIMIGEIGGAAEEDAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIKVSPSPARLGKTLVEVL 298 >gi|86359470|ref|YP_471362.1| succinyl-CoA synthetase subunit alpha [Rhizobium etli CFN 42] gi|86283572|gb|ABC92635.1| succinyl-CoA synthetase alpha subunit protein [Rhizobium etli CFN 42] Length = 300 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 234/298 (78%), Positives = 271/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGSKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KE+T A+A+VIYVPP+GA DAIIE+I+AEIP I CITEGIPV+DMVRVKARL++ Sbjct: 61 ATVAEGKEKTGADATVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLADEAT+SI+M+GEIGGSAEE+AAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADEATQSIIMIGEIGGSAEEDAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIKVSPSPARLGKTLVEVL 298 >gi|319780728|ref|YP_004140204.1| succinyl-CoA synthetase subunit alpha [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166616|gb|ADV10154.1| succinyl-CoA synthetase, alpha subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 300 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 232/298 (77%), Positives = 272/298 (91%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILVDKNTKVLVQGLTGK GTFHTEQA+ Y T++VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVDKNTKVLVQGLTGKTGTFHTEQALAYHGTKMVGGIHPKKGGETWTGAKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KE+T ANASV+YVPP+GA +AI+E+IEAEIPLI+CITEGIPV+DM+RVKARL++ Sbjct: 61 ATVAEGKEKTGANASVVYVPPAGAAEAILEAIEAEIPLIICITEGIPVMDMIRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S+SRLIGPNCPG+LTP+ CKIGIMPG+IFRKGSVG++SRSGTLTYEAVFQT+ GLGQ+T Sbjct: 121 STSRLIGPNCPGVLTPNECKIGIMPGNIFRKGSVGVVSRSGTLTYEAVFQTTNVGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFID+LE+FLADE T+SI+M+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDMLEMFLADEETKSIIMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPAR+G +LVE + Sbjct: 241 AGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIKVSPSPARLGTTLVEAI 298 >gi|218671347|ref|ZP_03521017.1| succinyl-CoA synthetase subunit alpha [Rhizobium etli GR56] Length = 300 Score = 484 bits (1246), Expect = e-135, Method: Compositional matrix adjust. Identities = 232/298 (77%), Positives = 271/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TK+LVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVNKDTKILVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGAKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KE+T A+A+VIYVPP+GA DAIIE+I+AEIP I CITEGIPV+DMVRVKARL++ Sbjct: 61 ATVAEGKEKTGADATVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGI+TP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGIMTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLADEAT+SI+M+GEIGGSAEE+AAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADEATQSIIMIGEIGGSAEEDAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIRVSPSPARLGKTLVEVL 298 >gi|13473638|ref|NP_105206.1| succinyl-CoA synthetase subunit alpha [Mesorhizobium loti MAFF303099] gi|14024388|dbj|BAB50992.1| succinyl-CoA synthetase alpha-subunit [Mesorhizobium loti MAFF303099] Length = 300 Score = 484 bits (1245), Expect = e-135, Method: Compositional matrix adjust. Identities = 232/298 (77%), Positives = 271/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILVDKNTKVLVQGLTGK GTFHTEQA+ Y T++VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVDKNTKVLVQGLTGKTGTFHTEQALAYHGTKMVGGIHPKKGGETWTGSKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE K +T ANASV+YVPP+GA +AI+E+IEAEIPLI+CITEGIPV+DMV+VKARL++ Sbjct: 61 ATVAEGKAKTGANASVVYVPPAGAAEAILEAIEAEIPLIICITEGIPVMDMVKVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S+SRLIGPNCPG+LTPD CKIGIMPG+IFRKGSVG++SRSGTLTYEAVFQT+ GLGQ+T Sbjct: 121 STSRLIGPNCPGVLTPDECKIGIMPGNIFRKGSVGVVSRSGTLTYEAVFQTTNVGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SI+M+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIIMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPAR+G +LVE + Sbjct: 241 AGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIKVSPSPARLGTTLVEAI 298 >gi|327188906|gb|EGE56098.1| succinyl-CoA synthetase protein, alpha subunit [Rhizobium etli CNPAF512] Length = 343 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 233/298 (78%), Positives = 270/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV-NVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG ++P+F Sbjct: 44 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGAKCESLPIF 103 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KE+T A+A+VIYVPP+GA DAIIE+I+AEIP I CITEGIPV+DMVRVKARL++ Sbjct: 104 ATVAEGKEKTGADATVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR 163 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 164 SKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 223 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+AT SI+M+GEIGGSAEE+AAQFLKDEAK+GRKKP+ Sbjct: 224 AVGIGGDPVKGTEFIDVLEMFLADDATTSIIMIGEIGGSAEEDAAQFLKDEAKKGRKKPM 283 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 284 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIKVSPSPARLGKTLVEVL 341 >gi|190893736|ref|YP_001980278.1| succinyl-CoA synthetase, alpha subunit [Rhizobium etli CIAT 652] gi|190699015|gb|ACE93100.1| succinyl-CoA synthetase protein, alpha subunit [Rhizobium etli CIAT 652] Length = 300 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 232/298 (77%), Positives = 270/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGAKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KE+T A+A+VIYVPP+GA DAIIE+I+AEIP I CITEGIPV+DMVRVKARL++ Sbjct: 61 ATVAEGKEKTGADATVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPG+LTP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGVLTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+AT SI+M+GEIGGSAEE+AAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDATTSIIMIGEIGGSAEEDAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIKVSPSPARLGKTLVEVL 298 >gi|209551254|ref|YP_002283171.1| succinyl-CoA synthetase subunit alpha [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537010|gb|ACI56945.1| succinyl-CoA synthetase, alpha subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 300 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 232/298 (77%), Positives = 270/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TK+LVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W+G ++P+F Sbjct: 1 MSILVNKDTKILVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWSGAKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KE+T A+A+VIYVPP+GA DAIIE+I+AEIP I CITEGIPV+DMVRVKARL++ Sbjct: 61 ATVAEGKEKTGADATVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLADEAT SI+M+GEIGGSAEE+AAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADEATTSIIMIGEIGGSAEEDAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIKVSPSPARLGKTLVEVL 298 >gi|319899503|ref|YP_004159600.1| succinyl-CoA synthetase, alpha chain [Bartonella clarridgeiae 73] gi|319403471|emb|CBI77051.1| succinyl-CoA synthetase, alpha chain [Bartonella clarridgeiae 73] Length = 300 Score = 481 bits (1239), Expect = e-134, Method: Compositional matrix adjust. Identities = 235/298 (78%), Positives = 268/298 (89%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSI V+KNTKVLVQGLTGK GTFHTEQA+ Y TQ+VGGI+PKKG W G +P+F Sbjct: 1 MSIFVNKNTKVLVQGLTGKTGTFHTEQALAYHGTQMVGGINPKKGGETWKGSKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V E KE+T ANASVIYVPP GA DAIIE+I+AEI LIVCITEGIPV+DMV+VKA+LEK Sbjct: 61 ASVVEGKEKTGANASVIYVPPVGAADAIIEAIDAEIGLIVCITEGIPVMDMVKVKAKLEK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPG+LTPD CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLIGPNCPGVLTPDECKIGIMPGAIFKKGSVGVVSRSGTLTYEAVFQTSHEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD TESIVM+GEIGGSAEEEAAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADNETESIVMIGEIGGSAEEEAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSP++IG++LV +L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPSQIGKTLVAVL 298 >gi|260464176|ref|ZP_05812369.1| succinyl-CoA synthetase, alpha subunit [Mesorhizobium opportunistum WSM2075] gi|259029979|gb|EEW31262.1| succinyl-CoA synthetase, alpha subunit [Mesorhizobium opportunistum WSM2075] Length = 300 Score = 481 bits (1238), Expect = e-134, Method: Compositional matrix adjust. Identities = 230/298 (77%), Positives = 271/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILVDKNTKVLVQGLTGK GTFHTEQA+ Y T++VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVDKNTKVLVQGLTGKTGTFHTEQALAYHGTKMVGGIHPKKGGETWTGSKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE K +T ANASV+YVPP+GA +AI+E+IEAEIPLI+CITEGIPV+DM++VKARL++ Sbjct: 61 ATVAEGKAKTGANASVVYVPPAGAAEAILEAIEAEIPLIICITEGIPVMDMIKVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S+SRLIGPNCPG+LTP+ CKIGIMPG+IFRKGSVG++SRSGTLTYEAVFQT+ GLGQ+T Sbjct: 121 SASRLIGPNCPGVLTPNECKIGIMPGNIFRKGSVGVVSRSGTLTYEAVFQTTNVGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SI+M+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIIMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPAR+G +LVE + Sbjct: 241 AGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIKVSPSPARLGTTLVEAI 298 >gi|227823643|ref|YP_002827616.1| succinyl-CoA synthetase subunit alpha [Sinorhizobium fredii NGR234] gi|227342645|gb|ACP26863.1| succinyl-CoA synthetase, alpha subunit [Sinorhizobium fredii NGR234] Length = 300 Score = 481 bits (1237), Expect = e-134, Method: Compositional matrix adjust. Identities = 233/298 (78%), Positives = 268/298 (89%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+KNTKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG +P+F Sbjct: 1 MSILVNKNTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGESWTGSKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE +E+T A+ASVIYVPP+GA DAIIE+I+AEIP I CITEGIPV DMVRVKARL++ Sbjct: 61 ASVAEGREKTGADASVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVADMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLADEAT SI+M+GEIGGSAEE+AAQFL DEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADEATTSIIMIGEIGGSAEEDAAQFLIDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM++AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMEQAGIRVSPSPARLGKTLVEVL 298 >gi|15966807|ref|NP_387160.1| succinyl-CoA synthetase subunit alpha [Sinorhizobium meliloti 1021] gi|307301635|ref|ZP_07581394.1| succinyl-CoA synthetase, alpha subunit [Sinorhizobium meliloti BL225C] gi|307316341|ref|ZP_07595785.1| succinyl-CoA synthetase, alpha subunit [Sinorhizobium meliloti AK83] gi|15076079|emb|CAC47633.1| Probable succinyl-CoA synthetase alpha chain [Sinorhizobium meliloti 1021] gi|306898181|gb|EFN28923.1| succinyl-CoA synthetase, alpha subunit [Sinorhizobium meliloti AK83] gi|306903333|gb|EFN33922.1| succinyl-CoA synthetase, alpha subunit [Sinorhizobium meliloti BL225C] Length = 300 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 239/298 (80%), Positives = 273/298 (91%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSIL++K+TKVLVQGLTGK GTFHTEQA+ Y T++VGGIHPKKG WTG +P+F Sbjct: 1 MSILINKDTKVLVQGLTGKTGTFHTEQALAYNGTKMVGGIHPKKGGETWTGAKGEQLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE ++ T ANASVIYVPP+GA AIIE+I+AEIPLIVCITEGIPV DMV+VKARLEK Sbjct: 61 ATVAEGRDATGANASVIYVPPAGAAAAIIEAIDAEIPLIVCITEGIPVADMVKVKARLEK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SSSRLIGPNCPG+LTPD CKIGIMPG+IFRKGSVG+LSRSGTLTYEAVFQT+ EGLGQ+T Sbjct: 121 SSSRLIGPNCPGVLTPDECKIGIMPGNIFRKGSVGVLSRSGTLTYEAVFQTTNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SI+M+GEIGGSAEEEAAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIIMIGEIGGSAEEEAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPARLGKTLVEVL 298 >gi|329891083|ref|ZP_08269426.1| succinyl-CoA ligase ADP-forming subunit alpha [Brevundimonas diminuta ATCC 11568] gi|328846384|gb|EGF95948.1| succinyl-CoA ligase ADP-forming subunit alpha [Brevundimonas diminuta ATCC 11568] Length = 300 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 222/298 (74%), Positives = 267/298 (89%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TK+LVQGLTGK G FHTEQA+ Y T++VGG+HP KG WTG + +P+F Sbjct: 1 MSILVNKDTKILVQGLTGKTGGFHTEQALAYYNTKMVGGVHPTKGGQTWTGSHGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE KERT A+A+VIYVPP+GA DAIIE+I+AEIP I CITEGIPV DMVRVKARL++ Sbjct: 61 ASVAEGKERTGADATVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVQDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S+SRL+GPNCPG+LTP+ CKIGIMPG+IF+KG+VGI+SRSGTLTYEAVFQT+ EGLGQ+T Sbjct: 121 SNSRLLGPNCPGVLTPEECKIGIMPGNIFKKGNVGIVSRSGTLTYEAVFQTTNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ATESI+M+GEIGG+AEE+AAQFL DEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDATESIIMIGEIGGAAEEDAAQFLIDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G +LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMEAAGIRVSPSPARLGATLVEVL 298 >gi|150398139|ref|YP_001328606.1| succinyl-CoA synthetase subunit alpha [Sinorhizobium medicae WSM419] gi|150029654|gb|ABR61771.1| succinyl-CoA synthetase, alpha subunit [Sinorhizobium medicae WSM419] Length = 300 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 237/298 (79%), Positives = 273/298 (91%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSIL++K+TKVLVQGLTGK GTFHTEQA+ Y T++VGGIHPKKG WTG +P+F Sbjct: 1 MSILINKDTKVLVQGLTGKTGTFHTEQALAYNGTKMVGGIHPKKGGETWTGAKGEQLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE ++ T A+ASVIYVPP+GA AIIE+I+AEIPLIVCITEGIPV DMV+VKARL+K Sbjct: 61 ATVAEGRDATGADASVIYVPPAGAAAAIIEAIDAEIPLIVCITEGIPVADMVKVKARLDK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SSSRLIGPNCPG+LTPD CKIGIMPG+IFRKGSVG+LSRSGTLTYEAVFQT+ EGLGQ+T Sbjct: 121 SSSRLIGPNCPGVLTPDECKIGIMPGNIFRKGSVGVLSRSGTLTYEAVFQTTNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SI+M+GEIGGSAEEEAAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIIMIGEIGGSAEEEAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPARLGKTLVEVL 298 >gi|222150039|ref|YP_002550996.1| succinyl-CoA synthetase subunit alpha [Agrobacterium vitis S4] gi|221737021|gb|ACM37984.1| succinyl-CoA synthetase alpha chain [Agrobacterium vitis S4] Length = 300 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 235/298 (78%), Positives = 273/298 (91%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSIL++K+TKVLVQGLTGK GTFHTEQA+ Y T++VGGIHP KG + WTG +P+F Sbjct: 1 MSILINKDTKVLVQGLTGKTGTFHTEQALAYYGTKMVGGIHPAKGGSNWTGSKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE K+ T ANASVIYVPP+GA AIIE+IEAEIPLIVCITEGIPV DMV+VKARL+K Sbjct: 61 ASVAEGKDVTGANASVIYVPPAGAAAAIIEAIEAEIPLIVCITEGIPVADMVKVKARLDK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPG++TP+ CKIGIMPGSIFRKGSVG+LSRSGTLTYEAVFQTS EGLGQ++ Sbjct: 121 SKSRLIGPNCPGVMTPEECKIGIMPGSIFRKGSVGVLSRSGTLTYEAVFQTSNEGLGQTS 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFID+LE++LADEAT+SI+M+GEIGGSAEEEAAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDILEMYLADEATKSIIMIGEIGGSAEEEAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIEAMESAGIRVSPSPARLGKTLVEVL 298 >gi|49474815|ref|YP_032857.1| succinyl-CoA synthetase subunit alpha [Bartonella quintana str. Toulouse] gi|49240319|emb|CAF26801.1| Succinyl-CoA synthetase alpha chain [Bartonella quintana str. Toulouse] Length = 300 Score = 464 bits (1194), Expect = e-129, Method: Compositional matrix adjust. Identities = 240/298 (80%), Positives = 272/298 (91%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSIL+ +NTKVLVQGLTGK GTFHTEQA+ Y T++VGGIHPKKG W G ++P+F Sbjct: 1 MSILIHQNTKVLVQGLTGKTGTFHTEQALAYYGTKMVGGIHPKKGGEVWEGSRGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE KERT A+ASVIYVPPSGA DAIIE+IEAEI LIVCITEGIPV+DMVRVK +LE+ Sbjct: 61 ASVAEGKERTGADASVIYVPPSGAADAIIEAIEAEIGLIVCITEGIPVMDMVRVKVKLEQ 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGILTP +CKIGIMPGSIFRKGSVG++SRSGTLTYEAVFQTSQEGLGQ+T Sbjct: 121 SKSRLIGPNCPGILTPHACKIGIMPGSIFRKGSVGVVSRSGTLTYEAVFQTSQEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEFIDVLELFLAD+ TESIVM+GEIGGSAEEEAAQFLKDEAK+GRKKPI Sbjct: 181 AIGIGGDPVKGTEFIDVLELFLADDETESIVMIGEIGGSAEEEAAQFLKDEAKKGRKKPI 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSP++IG++L+ LL Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMESAGIHVSPSPSQIGKTLMVLL 298 >gi|222087459|ref|YP_002545996.1| succinyl-CoA synthetase alpha subunit protein [Agrobacterium radiobacter K84] gi|221724907|gb|ACM28063.1| succinyl-CoA synthetase alpha subunit protein [Agrobacterium radiobacter K84] Length = 300 Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust. Identities = 232/298 (77%), Positives = 271/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSIL++K+TKVLVQGLTGK GTFHTEQA+ Y T++VGGIHP KG WTG +P+F Sbjct: 1 MSILINKDTKVLVQGLTGKTGTFHTEQALAYHGTKMVGGIHPSKGGETWTGKEGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE K+ T ANASVIYVPP+GA AI+E+I+AEIPLIVCITEGIPV DMV+VKARL+K Sbjct: 61 KSVAEGKDATGANASVIYVPPAGAAAAILEAIDAEIPLIVCITEGIPVADMVKVKARLDK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPG+LTP+ CKIGIMPGSIF+KGSVG+LSRSGTLTYEAVFQT+ EGLGQ+T Sbjct: 121 SKSRLIGPNCPGVLTPNECKIGIMPGSIFKKGSVGVLSRSGTLTYEAVFQTTNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFID+LE+FLAD+ T+SI+M+GEIGGSAEEEAAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDILEMFLADDETKSIIMIGEIGGSAEEEAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMEAAGIRVSPSPARLGKTLVEVL 298 >gi|239833052|ref|ZP_04681381.1| succinyl-CoA synthetase, alpha subunit [Ochrobactrum intermedium LMG 3301] gi|239825319|gb|EEQ96887.1| succinyl-CoA synthetase, alpha subunit [Ochrobactrum intermedium LMG 3301] Length = 300 Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust. Identities = 238/298 (79%), Positives = 272/298 (91%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGAKGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAEAKERT A+ASVIYVPP+GA DAIIE+IEAEIP IVCITEGIPV+DMVRVK RLE+ Sbjct: 61 ATVAEAKERTGADASVIYVPPAGAADAIIEAIEAEIPFIVCITEGIPVMDMVRVKERLER 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G++LVE+L Sbjct: 241 VGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVL 298 >gi|153008267|ref|YP_001369482.1| succinyl-CoA synthetase subunit alpha [Ochrobactrum anthropi ATCC 49188] gi|151560155|gb|ABS13653.1| succinyl-CoA synthetase, alpha subunit [Ochrobactrum anthropi ATCC 49188] Length = 300 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 238/298 (79%), Positives = 272/298 (91%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGQKGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAEAKERT A+ASVIYVPP+GA DAIIE+IEAEIP IVCITEGIPV+DMVRVK RLE+ Sbjct: 61 ATVAEAKERTGADASVIYVPPAGAADAIIEAIEAEIPFIVCITEGIPVMDMVRVKERLER 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G++LVE+L Sbjct: 241 VGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVL 298 >gi|254294600|ref|YP_003060623.1| succinyl-CoA synthetase subunit alpha [Hirschia baltica ATCC 49814] gi|254043131|gb|ACT59926.1| succinyl-CoA synthetase, alpha subunit [Hirschia baltica ATCC 49814] Length = 300 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 228/298 (76%), Positives = 270/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSIL+DKNTK+L QG+TGK G+FHT QA+ Y TQ+VGGIHPKKG T WT +P+F Sbjct: 1 MSILIDKNTKILTQGMTGKTGSFHTNQALDYFGTQMVGGIHPKKGGTNWTSDKGQELPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE KE+T A+ASVIYVPP+G G AIIE+IEAEIPLIVCITEG+PVLDMV VKA+L+K Sbjct: 61 ASVAEGKEKTGADASVIYVPPAGCGAAIIEAIEAEIPLIVCITEGVPVLDMVDVKAKLDK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPG++TP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAV+QTS EGLGQ++ Sbjct: 121 SKSRLIGPNCPGLMTPEQCKIGIMPGSIFKKGSVGVVSRSGTLTYEAVYQTSVEGLGQTS 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ TESI+M+GEIGGSAEEEAAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETESIIMIGEIGGSAEEEAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGRTMGHAGA++SGGKGGAEDKI AM+EAGI ++PSPAR+G ++ E+L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAIVSGGKGGAEDKIAAMEEAGITVSPSPARLGVTMTEVL 298 >gi|240851387|ref|YP_002972790.1| succinyl-CoA synthetase subunit alpha [Bartonella grahamii as4aup] gi|240268510|gb|ACS52098.1| succinyl-CoA synthetase subunit alpha [Bartonella grahamii as4aup] Length = 300 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 232/298 (77%), Positives = 270/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN-VPVF 59 MSILV+K TKVLVQGLTGK GTFHTEQA+ Y TQ+VGG++PKKG W G +P+F Sbjct: 1 MSILVNKETKVLVQGLTGKTGTFHTEQALAYHGTQMVGGVNPKKGGEIWEGSKGEALPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 VAEAKE+T A+ASVIYVPP+GA AIIE+IEAE+ LI+CITEGIPV+DMV+VKARLE Sbjct: 61 ANVAEAKEKTGADASVIYVPPAGAAAAIIEAIEAEVRLIICITEGIPVMDMVKVKARLEN 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGILTP+ CKIGIMPGSIFRKGSVG++SRSGTLTYEAVFQTSQEGLGQ+T Sbjct: 121 SKSRLIGPNCPGILTPNECKIGIMPGSIFRKGSVGVVSRSGTLTYEAVFQTSQEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEEEAAQFL+DEAK+GRKKP+ Sbjct: 181 AIGIGGDPVKGTEFIDVLEMFLADDETQSIVMIGEIGGSAEEEAAQFLQDEAKKGRKKPV 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSP++IG++L+ +L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPSQIGKTLMSVL 298 >gi|148559537|ref|YP_001259749.1| succinyl-CoA synthetase subunit alpha [Brucella ovis ATCC 25840] gi|148370794|gb|ABQ60773.1| succinyl-CoA synthetase, alpha subunit [Brucella ovis ATCC 25840] Length = 300 Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust. Identities = 237/298 (79%), Positives = 271/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGSKGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TTVAE KERT A+ASVIYVPP+GA DAIIE+IEAEI IVCITEGIPV+DMVRVK RLE+ Sbjct: 61 TTVAEGKERTGADASVIYVPPAGAADAIIEAIEAEIGFIVCITEGIPVMDMVRVKERLER 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G++LVE+L Sbjct: 241 VGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVL 298 >gi|325294006|ref|YP_004279870.1| succinyl-CoA synthetase subunit alpha [Agrobacterium sp. H13-3] gi|325061859|gb|ADY65550.1| succinyl-CoA synthetase subunit alpha [Agrobacterium sp. H13-3] Length = 300 Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust. Identities = 234/298 (78%), Positives = 272/298 (91%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TK+LVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVNKDTKILVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGSKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAEAKE+T A+ASVIYVPP+GA DAIIE+IEAEIP I CITEGIPV+DMVRVKARL++ Sbjct: 61 ATVAEAKEKTGADASVIYVPPAGAADAIIEAIEAEIPFITCITEGIPVMDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S+SRL+GPNCPGI+TP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SNSRLLGPNCPGIMTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLADEAT+SI+M+GEIGGSAEE+AAQFL DEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADEATQSIIMIGEIGGSAEEDAAQFLIDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMEAAGIKVSPSPARLGKTLVEVL 298 >gi|163869363|ref|YP_001610619.1| succinyl-CoA synthetase subunit alpha [Bartonella tribocorum CIP 105476] gi|161019066|emb|CAK02624.1| succinyl-CoA synthetase, alpha chain [Bartonella tribocorum CIP 105476] Length = 300 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 230/298 (77%), Positives = 272/298 (91%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGG++PKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGVNPKKGGETWEGSKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAEAKE+T A+ASVIYVPP+GA AI+E+IEAE+ LI+CITEGIPV+DMV+VKARLE Sbjct: 61 ASVAEAKEKTGADASVIYVPPAGAAAAILEAIEAEVRLIICITEGIPVMDMVKVKARLEN 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGILTP+ CKIGIMPGSIFRKGSVG++SRSGTLTYEAVFQTSQEGLGQ+T Sbjct: 121 SKSRLIGPNCPGILTPNECKIGIMPGSIFRKGSVGVVSRSGTLTYEAVFQTSQEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEEEAAQFL+DEA++GRKKP+ Sbjct: 181 AIGIGGDPVKGTEFIDVLEMFLADDETQSIVMIGEIGGSAEEEAAQFLQDEARKGRKKPV 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSP++IG++L+ +L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPSQIGKTLMSVL 298 >gi|23502775|ref|NP_698902.1| succinyl-CoA synthetase subunit alpha [Brucella suis 1330] gi|161619843|ref|YP_001593730.1| succinyl-CoA synthetase subunit alpha [Brucella canis ATCC 23365] gi|163843948|ref|YP_001628352.1| succinyl-CoA synthetase subunit alpha [Brucella suis ATCC 23445] gi|254700568|ref|ZP_05162396.1| succinyl-CoA synthetase subunit alpha [Brucella suis bv. 5 str. 513] gi|254704938|ref|ZP_05166766.1| succinyl-CoA synthetase subunit alpha [Brucella suis bv. 3 str. 686] gi|254707548|ref|ZP_05169376.1| succinyl-CoA synthetase subunit alpha [Brucella pinnipedialis M163/99/10] gi|254708915|ref|ZP_05170726.1| succinyl-CoA synthetase subunit alpha [Brucella pinnipedialis B2/94] gi|254717986|ref|ZP_05179797.1| succinyl-CoA synthetase subunit alpha [Brucella sp. 83/13] gi|256030441|ref|ZP_05444055.1| succinyl-CoA synthetase subunit alpha [Brucella pinnipedialis M292/94/1] gi|256059901|ref|ZP_05450087.1| succinyl-CoA synthetase subunit alpha [Brucella neotomae 5K33] gi|256158425|ref|ZP_05456323.1| succinyl-CoA synthetase subunit alpha [Brucella ceti M490/95/1] gi|256253845|ref|ZP_05459381.1| succinyl-CoA synthetase subunit alpha [Brucella ceti B1/94] gi|256370327|ref|YP_003107838.1| succinyl-CoA synthetase alpha subunit [Brucella microti CCM 4915] gi|260567586|ref|ZP_05838056.1| succinyl-CoA ligase [Brucella suis bv. 4 str. 40] gi|261220981|ref|ZP_05935262.1| succinyl-CoA synthetase subunit alpha [Brucella ceti B1/94] gi|261315031|ref|ZP_05954228.1| succinyl-CoA synthetase subunit alpha [Brucella pinnipedialis M163/99/10] gi|261316412|ref|ZP_05955609.1| succinyl-CoA synthetase subunit alpha [Brucella pinnipedialis B2/94] gi|261323871|ref|ZP_05963068.1| succinyl-CoA synthetase subunit alpha [Brucella neotomae 5K33] gi|261751074|ref|ZP_05994783.1| succinyl-CoA synthetase subunit alpha [Brucella suis bv. 5 str. 513] gi|261755636|ref|ZP_05999345.1| succinyl-CoA synthetase subunit alpha [Brucella suis bv. 3 str. 686] gi|265982930|ref|ZP_06095665.1| succinyl-CoA synthetase subunit alpha [Brucella sp. 83/13] gi|265987483|ref|ZP_06100040.1| succinyl-CoA synthetase subunit alpha [Brucella pinnipedialis M292/94/1] gi|265996940|ref|ZP_06109497.1| succinyl-CoA synthetase subunit alpha [Brucella ceti M490/95/1] gi|294851168|ref|ZP_06791841.1| succinyl-CoA ligase subunit alpha [Brucella sp. NVSL 07-0026] gi|306839764|ref|ZP_07472565.1| succinyl-CoA synthetase, alpha subunit [Brucella sp. NF 2653] gi|306842925|ref|ZP_07475561.1| succinyl-CoA synthetase, alpha subunit [Brucella sp. BO2] gi|23348795|gb|AAN30817.1| succinyl-CoA synthetase, alpha subunit [Brucella suis 1330] gi|161336654|gb|ABX62959.1| succinyl-CoA synthetase, alpha subunit [Brucella canis ATCC 23365] gi|163674671|gb|ABY38782.1| succinyl-CoA synthetase, alpha subunit [Brucella suis ATCC 23445] gi|256000490|gb|ACU48889.1| succinyl-CoA synthetase alpha subunit [Brucella microti CCM 4915] gi|260157104|gb|EEW92184.1| succinyl-CoA ligase [Brucella suis bv. 4 str. 40] gi|260919565|gb|EEX86218.1| succinyl-CoA synthetase subunit alpha [Brucella ceti B1/94] gi|261295635|gb|EEX99131.1| succinyl-CoA synthetase subunit alpha [Brucella pinnipedialis B2/94] gi|261299851|gb|EEY03348.1| succinyl-CoA synthetase subunit alpha [Brucella neotomae 5K33] gi|261304057|gb|EEY07554.1| succinyl-CoA synthetase subunit alpha [Brucella pinnipedialis M163/99/10] gi|261740827|gb|EEY28753.1| succinyl-CoA synthetase subunit alpha [Brucella suis bv. 5 str. 513] gi|261745389|gb|EEY33315.1| succinyl-CoA synthetase subunit alpha [Brucella suis bv. 3 str. 686] gi|262551408|gb|EEZ07398.1| succinyl-CoA synthetase subunit alpha [Brucella ceti M490/95/1] gi|264659680|gb|EEZ29941.1| succinyl-CoA synthetase subunit alpha [Brucella pinnipedialis M292/94/1] gi|264661522|gb|EEZ31783.1| succinyl-CoA synthetase subunit alpha [Brucella sp. 83/13] gi|294819757|gb|EFG36756.1| succinyl-CoA ligase subunit alpha [Brucella sp. NVSL 07-0026] gi|306286948|gb|EFM58468.1| succinyl-CoA synthetase, alpha subunit [Brucella sp. BO2] gi|306405119|gb|EFM61397.1| succinyl-CoA synthetase, alpha subunit [Brucella sp. NF 2653] Length = 300 Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust. Identities = 236/298 (79%), Positives = 270/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGSKGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KERT A+ASVIYVPP+GA DAIIE+IEAEI IVCITEGIPV+DMVRVK RLE+ Sbjct: 61 ATVAEGKERTGADASVIYVPPAGAADAIIEAIEAEIGFIVCITEGIPVMDMVRVKERLER 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G++LVE+L Sbjct: 241 VGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVL 298 >gi|306843376|ref|ZP_07475977.1| succinyl-CoA synthetase, alpha subunit [Brucella sp. BO1] gi|306276067|gb|EFM57767.1| succinyl-CoA synthetase, alpha subunit [Brucella sp. BO1] Length = 300 Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust. Identities = 236/298 (79%), Positives = 270/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGSKGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KERT A+ASVIYVPP+GA DAIIE+IEAEI IVCITEGIPV+DMVRVK RLE+ Sbjct: 61 ATVAEGKERTGADASVIYVPPAGAADAIIEAIEAEIRFIVCITEGIPVMDMVRVKERLER 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G++LVE+L Sbjct: 241 VGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVL 298 >gi|319404898|emb|CBI78499.1| succinyl-CoA synthetase, alpha chain [Bartonella rochalimae ATCC BAA-1498] Length = 300 Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust. Identities = 235/298 (78%), Positives = 270/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSIL++K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGI+PKKG W G +P+F Sbjct: 1 MSILINKDTKVLVQGLTGKTGTFHTEQALAYHGTQMVGGINPKKGGETWKGSKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V E KE+T A+ASVIYVPP+GA DAIIE+IEAEI LIVCITEGIPV+DMV+VKA+LE+ Sbjct: 61 ASVVEGKEKTGADASVIYVPPAGAADAIIEAIEAEIGLIVCITEGIPVMDMVKVKAKLEQ 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL GPNCPGILTPD CKIGIMPGSIFRKGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLTGPNCPGILTPDECKIGIMPGSIFRKGSVGVVSRSGTLTYEAVFQTSHEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEFIDVLE+FLAD TESIVM+GEIGGSAEEEAAQFLKDEAK+GRKKP+ Sbjct: 181 AIGIGGDPVKGTEFIDVLEMFLADNETESIVMIGEIGGSAEEEAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSP++IG++LVE+L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMEAAGIRVSPSPSQIGKTLVEVL 298 >gi|15889892|ref|NP_355573.1| succinyl-CoA synthetase subunit alpha [Agrobacterium tumefaciens str. C58] gi|15157841|gb|AAK88358.1| succinyl-CoA synthetase alpha chain [Agrobacterium tumefaciens str. C58] Length = 300 Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust. Identities = 232/298 (77%), Positives = 271/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TK+LVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVNKDTKILVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGSKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAEAKE+T A+ASVIYVPP+GA DAIIE+IEAEIP I CITEGIPV+DMVRVKARL++ Sbjct: 61 ATVAEAKEKTGADASVIYVPPAGAADAIIEAIEAEIPFITCITEGIPVMDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGI+TP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGIMTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFID+LE+FLAD+AT+SI+M+GEIGGSAEE+AAQFL DEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDILEMFLADDATQSIIMIGEIGGSAEEDAAQFLIDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMEAAGIKVSPSPARLGKTLVEVL 298 >gi|49476304|ref|YP_034345.1| succinyl-CoA synthetase subunit alpha [Bartonella henselae str. Houston-1] gi|49239112|emb|CAF28416.1| Succinyl-CoA synthetase alpha chain [Bartonella henselae str. Houston-1] Length = 300 Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust. Identities = 231/298 (77%), Positives = 271/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGG++PKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYHGTQMVGGVNPKKGGETWEGSKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE KE+T A+ASVIYVPP+GA AIIE++EAEI LI+CITEGIPV+DMV+VKARLEK Sbjct: 61 ASVAEGKEKTGADASVIYVPPAGAAAAIIEAVEAEIRLIICITEGIPVMDMVKVKARLEK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGILTP+ CKIGIMPGSIFRKGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLIGPNCPGILTPNECKIGIMPGSIFRKGSVGVVSRSGTLTYEAVFQTSHEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEEEAAQFL+DEAK+GRKKP+ Sbjct: 181 AIGIGGDPVKGTEFIDVLEMFLADDETQSIVMIGEIGGSAEEEAAQFLQDEAKKGRKKPV 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSP++IG++L+ +L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMESAGIKVSPSPSQIGKTLMSVL 298 >gi|319406381|emb|CBI80022.1| succinyl-CoA synthetase, alpha chain [Bartonella sp. AR 15-3] Length = 300 Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust. Identities = 235/298 (78%), Positives = 269/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSIL++K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGI+PKKG W G +P+F Sbjct: 1 MSILINKDTKVLVQGLTGKTGTFHTEQALAYHGTQMVGGINPKKGGETWKGLKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V E KE+T A+ASVIYVPP GA DAIIE+IEAEI LIVCITEGIPV+DMV+VKA+LE+ Sbjct: 61 ASVMEGKEKTGADASVIYVPPGGAADAIIEAIEAEIGLIVCITEGIPVMDMVKVKAKLEQ 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGILTPD CKIGIMPGSIFRKGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLIGPNCPGILTPDECKIGIMPGSIFRKGSVGVVSRSGTLTYEAVFQTSHEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEFIDVLE+FLADE T+SIVM+GEIGGSAEEEAAQFLKDEAK+GRKKPI Sbjct: 181 AIGIGGDPVKGTEFIDVLEMFLADEETQSIVMIGEIGGSAEEEAAQFLKDEAKKGRKKPI 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ A I ++PSP++IG++LV +L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMEAAEIRVSPSPSQIGKTLVAVL 298 >gi|319409451|emb|CBI83100.1| succinyl-CoA synthetase, alpha chain [Bartonella schoenbuchensis R1] Length = 300 Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust. Identities = 234/298 (78%), Positives = 271/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+KNTKVLVQGLTGK GTFHTEQA+ Y TQ+VGGI+PKKG W G +P+F Sbjct: 1 MSILVNKNTKVLVQGLTGKTGTFHTEQALAYHGTQMVGGINPKKGGETWEGSKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE KE+T A+ASVIYVPP+GA AIIE+IEAEI LIVCITEGIPV+DMV VKA+LE+ Sbjct: 61 ASVAEGKEKTGADASVIYVPPAGAAAAIIEAIEAEIGLIVCITEGIPVMDMVEVKAKLEQ 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGILTP+ CKIGIMPGSIF+KGSVGI+SRSGTLTYEAVFQTS+E LGQ+T Sbjct: 121 SQSRLIGPNCPGILTPNECKIGIMPGSIFKKGSVGIVSRSGTLTYEAVFQTSREDLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEFIDVLE+FLAD+ TESIVM+GEIGGSAEEEAAQF+KDEAK+GRKKP+ Sbjct: 181 AIGIGGDPVKGTEFIDVLEMFLADDETESIVMIGEIGGSAEEEAAQFIKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI+AM+ AGI ++PSP++IG++LV +L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKISAMESAGIRVSPSPSQIGKTLVSVL 298 >gi|254713658|ref|ZP_05175469.1| succinyl-CoA synthetase subunit alpha [Brucella ceti M644/93/1] gi|254715988|ref|ZP_05177799.1| succinyl-CoA synthetase subunit alpha [Brucella ceti M13/05/1] gi|261217754|ref|ZP_05932035.1| succinyl-CoA synthetase subunit alpha [Brucella ceti M13/05/1] gi|261321398|ref|ZP_05960595.1| succinyl-CoA synthetase subunit alpha [Brucella ceti M644/93/1] gi|260922843|gb|EEX89411.1| succinyl-CoA synthetase subunit alpha [Brucella ceti M13/05/1] gi|261294088|gb|EEX97584.1| succinyl-CoA synthetase subunit alpha [Brucella ceti M644/93/1] Length = 300 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 235/298 (78%), Positives = 269/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGSKGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KERT A+ASVIYVPP+GA DAIIE+IEAEI IVCITEGIPV+DMVRVK RLE+ Sbjct: 61 ATVAEGKERTGADASVIYVPPAGAADAIIEAIEAEIGFIVCITEGIPVMDMVRVKERLER 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGD VKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDSVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G++LVE+L Sbjct: 241 VGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVL 298 >gi|319407857|emb|CBI81510.1| succinyl-CoA synthetase, alpha chain [Bartonella sp. 1-1C] Length = 300 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 235/298 (78%), Positives = 269/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSIL++K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGI+PKKG W G +P+F Sbjct: 1 MSILINKDTKVLVQGLTGKTGTFHTEQALAYHGTQMVGGINPKKGGETWKGSKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V E KE+T A+ASVIYVPP+GA DAIIE+IEAEI LIVCITEGIPV+DMV+VKA+LE+ Sbjct: 61 ASVVEGKEKTGADASVIYVPPAGAADAIIEAIEAEIGLIVCITEGIPVMDMVKVKAKLEQ 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGILTPD CKIGIMPGSIFRKGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLIGPNCPGILTPDECKIGIMPGSIFRKGSVGVVSRSGTLTYEAVFQTSHEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEFIDVLE+FLAD TESIVM+GEIGGSAEE AAQFLKDEAK+GRKKP+ Sbjct: 181 AIGIGGDPVKGTEFIDVLEMFLADNETESIVMIGEIGGSAEEAAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSP++IG++LVE L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMEAAGIRVSPSPSQIGKTLVEEL 298 >gi|126726905|ref|ZP_01742744.1| succinyl-CoA synthetase subunit alpha [Rhodobacterales bacterium HTCC2150] gi|126703863|gb|EBA02957.1| succinyl-CoA synthetase subunit alpha [Rhodobacterales bacterium HTCC2150] Length = 299 Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust. Identities = 225/299 (75%), Positives = 265/299 (88%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSIL++K+TK++VQGLTGK GTFHTEQA+ Y TQ+V G HPKKG T WT +P+F Sbjct: 1 MSILINKDTKIIVQGLTGKTGTFHTEQALAYHGTQMVAGTHPKKGGTNWTAESGAELPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAEAKE+T A ASVIYVPP+GA AI E+I+AEI LI CITEG+PV DMVRVK +L+ Sbjct: 61 ASVAEAKEQTGATASVIYVPPAGAAAAIEEAIDAEIDLITCITEGVPVQDMVRVKEKLDA 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPG++TPD CKIGIMPGSIF+KGSVG+LSRSGTLTYEAVFQT+Q GLGQS+ Sbjct: 121 SKSRLIGPNCPGLMTPDECKIGIMPGSIFKKGSVGVLSRSGTLTYEAVFQTTQAGLGQSS 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFID+LEL+LAD T+SI+M+GEIGGSAEE+AAQFL DEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDILELYLADPETQSIIMIGEIGGSAEEDAAQFLIDEAKKGRKKPV 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAPPGRTMGHAGAVISGGKGGA+DKI AM+EAGI ++PSPA++G +LVELLG Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGADDKIAAMQEAGIAVSPSPAKLGETLVELLG 299 >gi|225628125|ref|ZP_03786160.1| succinyl-CoA synthetase, alpha subunit [Brucella ceti str. Cudo] gi|260169351|ref|ZP_05756162.1| succinyl-CoA synthetase subunit alpha [Brucella sp. F5/99] gi|261758867|ref|ZP_06002576.1| succinyl-CoA ligase [Brucella sp. F5/99] gi|225616950|gb|EEH13997.1| succinyl-CoA synthetase, alpha subunit [Brucella ceti str. Cudo] gi|261738851|gb|EEY26847.1| succinyl-CoA ligase [Brucella sp. F5/99] Length = 300 Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust. Identities = 235/298 (78%), Positives = 269/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGSKGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KERT A+ASVIYVP +GA DAIIE+IEAEI IVCITEGIPV+DMVRVK RLE+ Sbjct: 61 ATVAEGKERTGADASVIYVPLAGAADAIIEAIEAEIGFIVCITEGIPVMDMVRVKERLER 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G++LVE+L Sbjct: 241 VGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVL 298 >gi|62290779|ref|YP_222572.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 1 str. 9-941] gi|82700690|ref|YP_415264.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis biovar Abortus 2308] gi|189024994|ref|YP_001935762.1| succinyl-CoA synthetase subunit alpha [Brucella abortus S19] gi|237816287|ref|ZP_04595280.1| succinyl-CoA synthetase, alpha subunit [Brucella abortus str. 2308 A] gi|254690068|ref|ZP_05153322.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 6 str. 870] gi|254694556|ref|ZP_05156384.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 3 str. Tulya] gi|254696181|ref|ZP_05158009.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 2 str. 86/8/59] gi|254731099|ref|ZP_05189677.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 4 str. 292] gi|256258321|ref|ZP_05463857.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 9 str. C68] gi|260546045|ref|ZP_05821785.1| succinyl-CoA ligase [Brucella abortus NCTC 8038] gi|260755604|ref|ZP_05867952.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 6 str. 870] gi|260758829|ref|ZP_05871177.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 4 str. 292] gi|260760553|ref|ZP_05872896.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 2 str. 86/8/59] gi|260884630|ref|ZP_05896244.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 9 str. C68] gi|261214878|ref|ZP_05929159.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 3 str. Tulya] gi|297247166|ref|ZP_06930884.1| succinyl-CoA ligase subunit alpha [Brucella abortus bv. 5 str. B3196] gi|62196911|gb|AAX75211.1| SucD, succinyl-CoA synthetase, alpha subunit [Brucella abortus bv. 1 str. 9-941] gi|82616791|emb|CAJ11881.1| CoA Binding Domain:Succinyl-CoA ligase, alpha subunit:ATP-citrate lyase/succinyl-CoA ligase [Brucella melitensis biovar Abortus 2308] gi|189020566|gb|ACD73288.1| Succinyl-CoA ligase [Brucella abortus S19] gi|237788354|gb|EEP62569.1| succinyl-CoA synthetase, alpha subunit [Brucella abortus str. 2308 A] gi|260096152|gb|EEW80028.1| succinyl-CoA ligase [Brucella abortus NCTC 8038] gi|260669147|gb|EEX56087.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 4 str. 292] gi|260670985|gb|EEX57806.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 2 str. 86/8/59] gi|260675712|gb|EEX62533.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 6 str. 870] gi|260874158|gb|EEX81227.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 9 str. C68] gi|260916485|gb|EEX83346.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 3 str. Tulya] gi|297174335|gb|EFH33682.1| succinyl-CoA ligase subunit alpha [Brucella abortus bv. 5 str. B3196] Length = 300 Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust. Identities = 235/298 (78%), Positives = 269/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGSKGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KERT A+ASVIYVPP+GA DAIIE+IEAEI IVCITEGIPV+DMVRVK RLE+ Sbjct: 61 ATVAEGKERTGADASVIYVPPAGAADAIIEAIEAEIGFIVCITEGIPVMDMVRVKERLER 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TA GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G++LVE+L Sbjct: 241 VGFIAGRTALAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVL 298 >gi|110635725|ref|YP_675933.1| succinyl-CoA synthetase subunit alpha [Mesorhizobium sp. BNC1] gi|110286709|gb|ABG64768.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Chelativorans sp. BNC1] Length = 303 Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust. Identities = 228/300 (76%), Positives = 267/300 (89%), Gaps = 3/300 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGG---NVNVP 57 MSILVDKNTKVLVQGLTGK GTFHTEQA+ Y T++VGGIHPKKG W G +P Sbjct: 1 MSILVDKNTKVLVQGLTGKTGTFHTEQALAYYGTKMVGGIHPKKGGETWRSGLDSAAELP 60 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 +F +VAE KE+T A+ASVIYVPP+GA AIIE+IEAEIPLIVCITEGIPV+DMV VKA+L Sbjct: 61 IFASVAEGKEKTGADASVIYVPPAGAAAAIIEAIEAEIPLIVCITEGIPVMDMVHVKAKL 120 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +KS SRLIGPNCPG+LTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQT+ EGLGQ Sbjct: 121 DKSKSRLIGPNCPGVLTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTTNEGLGQ 180 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 +TAVGIGGDPVKGTEFID+LE+FLAD+ T+SI+M+GEIGGSAEE+AAQFL DEA+RGRKK Sbjct: 181 TTAVGIGGDPVKGTEFIDILEMFLADDETKSIIMIGEIGGSAEEDAAQFLMDEARRGRKK 240 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+ GF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPAR+G++L E + Sbjct: 241 PMAGFIAGRTAPKGRTMGHAGAVISGGKGGAEDKIEAMERAGIKVSPSPARLGQTLSEAI 300 >gi|298292945|ref|YP_003694884.1| succinyl-CoA synthetase, subunit alpha [Starkeya novella DSM 506] gi|296929456|gb|ADH90265.1| succinyl-CoA synthetase, alpha subunit [Starkeya novella DSM 506] Length = 298 Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust. Identities = 221/297 (74%), Positives = 262/297 (88%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TK++ QG TGK GTFH+EQA+ Y ++VVGG P KG + G +PVF Sbjct: 1 MSVLINKDTKIITQGFTGKNGTFHSEQALAY-GSKVVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E+T A+ASV+YVPP GA DAI E+I AEIPLIVCITEGIPVLDMV+V+ L+ S Sbjct: 56 TVAEAREKTGADASVVYVPPPGAADAICEAIAAEIPLIVCITEGIPVLDMVKVRRALDGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+T CKIGIMP +IFRKG+VGI+SRSGTLTYEAVFQTSQEGLGQ+TA Sbjct: 116 KSRLVGPNCPGIVTAGECKIGIMPANIFRKGNVGIVSRSGTLTYEAVFQTSQEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLELFLAD+ATESIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLELFLADDATESIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPAR+G++L+E+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIVVSPSPARLGKTLIEVL 292 >gi|17986423|ref|NP_539057.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis bv. 1 str. 16M] gi|225853363|ref|YP_002733596.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis ATCC 23457] gi|256045531|ref|ZP_05448414.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis bv. 1 str. Rev.1] gi|256112258|ref|ZP_05453179.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis bv. 3 str. Ether] gi|256263153|ref|ZP_05465685.1| succinyl-CoA ligase [Brucella melitensis bv. 2 str. 63/9] gi|260562841|ref|ZP_05833327.1| succinyl-CoA ligase [Brucella melitensis bv. 1 str. 16M] gi|265991955|ref|ZP_06104512.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis bv. 1 str. Rev.1] gi|265993687|ref|ZP_06106244.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis bv. 3 str. Ether] gi|17982017|gb|AAL51321.1| succinyl-CoA synthetase alpha chain [Brucella melitensis bv. 1 str. 16M] gi|225641728|gb|ACO01642.1| succinyl-CoA synthetase, alpha subunit [Brucella melitensis ATCC 23457] gi|260152857|gb|EEW87949.1| succinyl-CoA ligase [Brucella melitensis bv. 1 str. 16M] gi|262764668|gb|EEZ10589.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis bv. 3 str. Ether] gi|263003021|gb|EEZ15314.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis bv. 1 str. Rev.1] gi|263093058|gb|EEZ17208.1| succinyl-CoA ligase [Brucella melitensis bv. 2 str. 63/9] gi|289467877|gb|ADC95623.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis bv. 1 str. M5] gi|326409927|gb|ADZ66992.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis M28] gi|326539640|gb|ADZ87855.1| succinyl-CoA synthetase, alpha subunit [Brucella melitensis M5-90] Length = 300 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 234/298 (78%), Positives = 269/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGSKGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KERT A+ASVIYVPP+GA DAIIE+IEAEI IVCITEGIPV+D+VRVK RLE+ Sbjct: 61 ATVAEGKERTGADASVIYVPPAGAADAIIEAIEAEIGFIVCITEGIPVMDIVRVKERLER 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TA GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G++LVE+L Sbjct: 241 VGFIAGRTALAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVL 298 >gi|114707320|ref|ZP_01440217.1| succinyl-CoA synthetase alpha subunit [Fulvimarina pelagi HTCC2506] gi|114537201|gb|EAU40328.1| succinyl-CoA synthetase alpha subunit [Fulvimarina pelagi HTCC2506] Length = 306 Score = 448 bits (1153), Expect = e-124, Method: Compositional matrix adjust. Identities = 227/304 (74%), Positives = 266/304 (87%), Gaps = 7/304 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN------- 53 MSILV+KNTK++VQGLTGK GTFHTEQA+ Y TQ+V GIHPKKG WT G Sbjct: 1 MSILVEKNTKIIVQGLTGKTGTFHTEQALAYHGTQMVAGIHPKKGGETWTAGEGAKDAAG 60 Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV 113 +P+FT+VAEAK++T A ASVIYVPP+GA AI E+IEA I LI CITEGIPV DMV+V Sbjct: 61 TELPIFTSVAEAKDKTGATASVIYVPPAGAAAAIEEAIEAGIDLITCITEGIPVSDMVKV 120 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 KA+LEKS SRLIGPNCPG+LTP+ CKIGIMPG+IF KGSVG++SRSGTLTYEAVFQT+ E Sbjct: 121 KAKLEKSKSRLIGPNCPGVLTPEECKIGIMPGNIFSKGSVGVVSRSGTLTYEAVFQTTNE 180 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 GLGQ+TAVGIGGDPVKGTEFIDVLE+FLAD+AT+SI+M+GEIGGSAEE+AAQFL DEAK+ Sbjct: 181 GLGQTTAVGIGGDPVKGTEFIDVLEMFLADDATQSIIMIGEIGGSAEEDAAQFLADEAKK 240 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 GR KP VGF+AG+TAP GRTMGHAGAV+SGGKGGAEDKI AM++AGI ++PSPA++G++L Sbjct: 241 GRSKPTVGFIAGRTAPKGRTMGHAGAVVSGGKGGAEDKIEAMEKAGIRVSPSPAQLGKTL 300 Query: 294 VELL 297 VELL Sbjct: 301 VELL 304 >gi|328545846|ref|YP_004305955.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [polymorphum gilvum SL003B-26A1] gi|326415586|gb|ADZ72649.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Polymorphum gilvum SL003B-26A1] Length = 302 Score = 448 bits (1152), Expect = e-124, Method: Compositional matrix adjust. Identities = 230/300 (76%), Positives = 269/300 (89%), Gaps = 3/300 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGG---NVNVP 57 MSILV+K+TKV+VQGLTGK GTFHTEQA+ Y T++V G+HP KG WT G + +P Sbjct: 1 MSILVNKDTKVIVQGLTGKTGTFHTEQALQYYGTRMVAGVHPAKGGETWTSGVDASATLP 60 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 ++ +VAEAK+ T A+ASVIYVPP+GAG AIIE+IEAEIP IVCITEGIPV DMV+VKARL Sbjct: 61 IYASVAEAKDATGADASVIYVPPAGAGAAIIEAIEAEIPFIVCITEGIPVADMVKVKARL 120 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 EKS SRL+GPNCPGILTP+ CKIGIMPGSIF+KGSVGI+SRSGTLTYEAVFQTS GLGQ Sbjct: 121 EKSKSRLLGPNCPGILTPEECKIGIMPGSIFKKGSVGIVSRSGTLTYEAVFQTSNAGLGQ 180 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 +TAVGIGGDPVKGTEFIDVLE+FLAD+AT+SI+M+GEIGGSAEE+AAQFL+DEAKRGRKK Sbjct: 181 TTAVGIGGDPVKGTEFIDVLEMFLADDATQSIIMIGEIGGSAEEDAAQFLRDEAKRGRKK 240 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+ GF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G +LVE+L Sbjct: 241 PMAGFIAGRTAPKGRTMGHAGAVISGGKGGAEDKIAAMEAAGIRVSPSPAKLGETLVEVL 300 >gi|16124593|ref|NP_419157.1| succinyl-CoA synthetase subunit alpha [Caulobacter crescentus CB15] gi|221233280|ref|YP_002515716.1| succinyl-CoA synthetase subunit alpha [Caulobacter crescentus NA1000] gi|13421487|gb|AAK22325.1| succinyl-CoA synthetase, alpha subunit [Caulobacter crescentus CB15] gi|220962452|gb|ACL93808.1| succinyl-CoA synthetase alpha chain [Caulobacter crescentus NA1000] Length = 294 Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust. Identities = 221/297 (74%), Positives = 261/297 (87%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+ +TKV+ QG+TG GTFHTEQAI Y TQ+VGG+ P KG ++ +PVF Sbjct: 1 MSVLIGSHTKVICQGITGAQGTFHTEQAIAY-GTQMVGGVTPGKGGQT----HIGLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK+RT A+ASVIYVPP A D+I+E+IEAEIPLIVCITEGIPVLDMV+VK L+ S Sbjct: 56 TVAEAKDRTGADASVIYVPPPFAADSILEAIEAEIPLIVCITEGIPVLDMVKVKKALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP CKIGIMPGSIF +GSVG++SRSGTLTYEAVFQT+ GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPKQCKIGIMPGSIFSEGSVGVVSRSGTLTYEAVFQTTNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLADEAT+SIVM+GEIGGSAEEEAAQFLKDEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADEATKSIVMIGEIGGSAEEEAAQFLKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGGKGGAEDKI AM++AGI ++PSPA++G +L+E+L Sbjct: 236 GFIAGRTAPPGRHMGHAGAIVSGGKGGAEDKIAAMEDAGIRVSPSPAKLGETLLEVL 292 >gi|158425638|ref|YP_001526930.1| succinyl-CoA ligase alpha subunit [Azorhizobium caulinodans ORS 571] gi|158332527|dbj|BAF90012.1| succinyl-CoA ligase alpha subunit [Azorhizobium caulinodans ORS 571] Length = 295 Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust. Identities = 224/297 (75%), Positives = 258/297 (86%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+D NTKV+ QG TGK GTFH+EQAI Y T+VVGG P KG + G +PVF Sbjct: 2 MSVLIDANTKVITQGFTGKNGTFHSEQAIAYG-TKVVGGTSPGKGGSTHLG----LPVFD 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+E+T A+ASVIYVPP GA DAI+E+I+AEIPLIVCITEGIPVLDMV+VK L S Sbjct: 57 TVIEAREKTGADASVIYVPPPGAADAILEAIDAEIPLIVCITEGIPVLDMVKVKRALSGS 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T KIGIMP +IF+ GSVGI+SRSGTLTYEAVFQTSQEGLGQ++A Sbjct: 117 KSRLIGPNCPGVVTAGQSKIGIMPANIFKTGSVGIVSRSGTLTYEAVFQTSQEGLGQTSA 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLELFLAD TESIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+V Sbjct: 177 VGIGGDPVKGTEFIDVLELFLADPKTESIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPMV 236 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+EAGI ++PSPAR+G++LVE+L Sbjct: 237 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEEAGIRVSPSPARLGKTLVEVL 293 >gi|83944770|ref|ZP_00957136.1| succinyl-CoA synthetase alpha subunit [Oceanicaulis alexandrii HTCC2633] gi|83851552|gb|EAP89407.1| succinyl-CoA synthetase alpha subunit [Oceanicaulis alexandrii HTCC2633] Length = 302 Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust. Identities = 225/300 (75%), Positives = 268/300 (89%), Gaps = 3/300 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGG---NVNVP 57 MS+LV+K+TKV+VQGLTGK GTFHTEQA+ Y T++V G+HPKKG WT G + +P Sbjct: 1 MSVLVNKDTKVIVQGLTGKTGTFHTEQALNYYGTKMVAGVHPKKGGESWTSGLDGSATLP 60 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 ++ TV +AKE T A ASVIYVPP+GAG AIIE+I+A I LI CITEGIPV+DMV+VKARL Sbjct: 61 IYATVGDAKEATGATASVIYVPPAGAGAAIIEAIDAGIELITCITEGIPVMDMVKVKARL 120 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 EKS+SRL+GPNCPG+LTP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQTS GLGQ Sbjct: 121 EKSNSRLLGPNCPGVLTPEECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTSNAGLGQ 180 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 +TAVGIGGDPVKGTEFIDVLE+FLAD+ T+SI+M+GEIGGSAEE+AAQFLKDEAK+GRKK Sbjct: 181 TTAVGIGGDPVKGTEFIDVLEMFLADDETKSIIMIGEIGGSAEEDAAQFLKDEAKKGRKK 240 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+VGF+AG+TAPPGRTMGHAGA++SGGKGGAEDKI AMK AGI ++ SPAR+G +LVE+L Sbjct: 241 PMVGFIAGRTAPPGRTMGHAGAIVSGGKGGAEDKIEAMKAAGIVVSDSPARLGDTLVEVL 300 >gi|170740404|ref|YP_001769059.1| succinyl-CoA synthetase subunit alpha [Methylobacterium sp. 4-46] gi|168194678|gb|ACA16625.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium sp. 4-46] Length = 294 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 224/297 (75%), Positives = 258/297 (86%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TGK GTFH+EQAI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGKNGTFHSEQAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+E T A+ASV+YVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK LE S Sbjct: 56 TVQEAREATGADASVVYVPPPGAADAICEAIQAEIPLIVCITEGIPVLDMVRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+T KIGIMP +IF+ GSVGI+SRSGTLTYEAVFQTS EGLGQ+TA Sbjct: 116 KSRLVGPNCPGIVTAGESKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTSNEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFID+LELFLADE TESIVM+GEIGGSAEEEAAQF++DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDMLELFLADEKTESIVMIGEIGGSAEEEAAQFIRDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+EAGI ++PSPAR+G++LV++L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEEAGIRVSPSPARLGKTLVDVL 292 >gi|114571357|ref|YP_758037.1| succinyl-CoA synthetase subunit alpha [Maricaulis maris MCS10] gi|114341819|gb|ABI67099.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Maricaulis maris MCS10] Length = 302 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 228/300 (76%), Positives = 266/300 (88%), Gaps = 3/300 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGG---NVNVP 57 MSI+VDKNTKV+VQGLTGK GTFHTEQA+ Y TQ+V G+HPKKG W+ G ++P Sbjct: 1 MSIIVDKNTKVIVQGLTGKTGTFHTEQALEYYGTQMVAGVHPKKGGETWSAGMDGAASLP 60 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 +F +V EAKE T A+ASVIYVPP+GAG AIIE+I+AEIP IVCITEGIPV+DMV+VK RL Sbjct: 61 IFASVGEAKEATGADASVIYVPPAGAGAAIIEAIDAEIPFIVCITEGIPVMDMVKVKDRL 120 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +KSSS L+GPNCPGILTP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQTSQ GLGQ Sbjct: 121 DKSSSMLLGPNCPGILTPEECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTSQVGLGQ 180 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 +TAVGIGGDPVKGTEFIDVLE FLAD+ T+SI+M+GEIGGSAEE+AAQFL DEAK+GR K Sbjct: 181 TTAVGIGGDPVKGTEFIDVLEKFLADDETKSIIMIGEIGGSAEEDAAQFLADEAKKGRSK 240 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P VGF+AG+TAPPGRTMGHAGA++SGGKGGAEDKI AM+ AGI ++PSPAR+G +L ELL Sbjct: 241 PTVGFIAGRTAPPGRTMGHAGAIVSGGKGGAEDKIAAMEAAGIKVSPSPARLGTTLAELL 300 >gi|118590557|ref|ZP_01547959.1| succinyl-CoA synthetase subunit alpha [Stappia aggregata IAM 12614] gi|118437020|gb|EAV43659.1| succinyl-CoA synthetase subunit alpha [Stappia aggregata IAM 12614] Length = 302 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 223/300 (74%), Positives = 268/300 (89%), Gaps = 3/300 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGG---NVNVP 57 MSILV+K+TK++VQGLTGK GTFHTEQA+ Y T++V G+HPKKG W+ G ++P Sbjct: 1 MSILVNKDTKIIVQGLTGKTGTFHTEQALEYYGTKMVAGVHPKKGGETWSSGVDSAASLP 60 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 ++ +V EA+E T A+ASVIYVPP+GAG AIIE+IEAE+P IVCITEGIPV DMV+VKA+L Sbjct: 61 IYASVGEAREATGADASVIYVPPAGAGAAIIEAIEAEVPFIVCITEGIPVADMVKVKAKL 120 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 EKS SRL+GPNCPGILTP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQT+ GLGQ Sbjct: 121 EKSKSRLLGPNCPGILTPEECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTTNAGLGQ 180 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 +TAVGIGGDPVKGTEFIDVLE+FLAD+ T+SI+M+GEIGGSAEE+AAQFLKDEAKRGR K Sbjct: 181 TTAVGIGGDPVKGTEFIDVLEMFLADDETQSIIMIGEIGGSAEEDAAQFLKDEAKRGRSK 240 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+ GF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G +L+E+L Sbjct: 241 PMAGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMEAAGIKVSPSPAKLGETLLEVL 300 >gi|307942803|ref|ZP_07658148.1| succinyl-CoA ligase, alpha subunit [Roseibium sp. TrichSKD4] gi|307773599|gb|EFO32815.1| succinyl-CoA ligase, alpha subunit [Roseibium sp. TrichSKD4] Length = 302 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 223/300 (74%), Positives = 267/300 (89%), Gaps = 3/300 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGG---NVNVP 57 MSILV+K+TK++VQGLTGK G+FHTEQA+ Y TQ+V G+HPKKG WT + +P Sbjct: 1 MSILVNKDTKIIVQGLTGKTGSFHTEQALQYYGTQMVAGVHPKKGGESWTSNLDADAKLP 60 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 ++ +V EAKE T A+ASVIYVPP+GAG AIIE+I+AEIP I CITEGIPV DMV+VK RL Sbjct: 61 IYASVGEAKEATGADASVIYVPPAGAGAAIIEAIDAEIPFISCITEGIPVADMVKVKRRL 120 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 EKS+SRL+GPNCPGILTP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQTS GLGQ Sbjct: 121 EKSNSRLLGPNCPGILTPEECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTSNAGLGQ 180 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 +TAVGIGGDPVKGTEFIDVLE+FLAD+ T+SI+M+GEIGGSAEEEAAQF+KDEAK+GR K Sbjct: 181 TTAVGIGGDPVKGTEFIDVLEMFLADDETQSIIMIGEIGGSAEEEAAQFIKDEAKKGRNK 240 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+ GF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM++AGI ++PSPA++G +L+E+L Sbjct: 241 PMAGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMEDAGIKVSPSPAKLGETLLEVL 300 >gi|295691152|ref|YP_003594845.1| succinyl-CoA synthetase subunit alpha [Caulobacter segnis ATCC 21756] gi|295433055|gb|ADG12227.1| succinyl-CoA synthetase, alpha subunit [Caulobacter segnis ATCC 21756] Length = 294 Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust. Identities = 219/297 (73%), Positives = 259/297 (87%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+ +TKV+ QG+TG GTFH+EQAI Y T++VGG+ P KG ++ +PVF Sbjct: 1 MSVLIGSHTKVICQGITGAQGTFHSEQAIAY-GTKMVGGVTPGKGGQT----HIGLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAKE T A+ASVIYVPP A D+I+E+IEAEIPLIVCITEGIPVLDMV+VK L+ S Sbjct: 56 TVIEAKEATGADASVIYVPPPFAADSILEAIEAEIPLIVCITEGIPVLDMVKVKKALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP CKIGIMPGSIF KGSVG++SRSGTLTYEAVFQT+ GLGQ+TA Sbjct: 116 RSRLIGPNCPGVLTPGECKIGIMPGSIFSKGSVGVVSRSGTLTYEAVFQTTNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLADEAT+SIVM+GEIGGSAEEEAAQFLKDEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADEATKSIVMIGEIGGSAEEEAAQFLKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGGKGGAEDKI AM++AGI ++PSPA++G +L+E+L Sbjct: 236 GFIAGRTAPPGRHMGHAGAIVSGGKGGAEDKIAAMEDAGIRVSPSPAKLGETLLEVL 292 >gi|90421034|ref|ZP_01228937.1| succinyl-CoA synthetase, alpha subunit [Aurantimonas manganoxydans SI85-9A1] gi|90334669|gb|EAS48446.1| succinyl-CoA synthetase, alpha subunit [Aurantimonas manganoxydans SI85-9A1] Length = 303 Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust. Identities = 222/301 (73%), Positives = 267/301 (88%), Gaps = 4/301 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN----VNV 56 MSILVDKNTKV+VQGLTGK G+FHTEQA+ Y TQ+VGG HPKKG W G + V + Sbjct: 1 MSILVDKNTKVIVQGLTGKTGSFHTEQALAYYGTQMVGGTHPKKGGEMWEGQSDGRTVQL 60 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 P+F++V EA+++T A ASVIYVPP+GA AI E+I+AEI LIVCITEGIPV DMVRVKA+ Sbjct: 61 PIFSSVVEARDKTGATASVIYVPPAGAAAAIEEAIDAEIGLIVCITEGIPVSDMVRVKAK 120 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L+K+ SRL+GPNCPG+LTP+ CKIGIMPG+IF+ G+VGI+SRSGTLTYEAVFQT+ EGLG Sbjct: 121 LDKTKSRLLGPNCPGVLTPEQCKIGIMPGNIFKTGNVGIVSRSGTLTYEAVFQTTNEGLG 180 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 Q+TAVGIGGDPVKGTEFID+LE+FLAD+ T+S++M+GEIGGSAEEEAAQFLKDEAK+GR Sbjct: 181 QTTAVGIGGDPVKGTEFIDMLEMFLADDETKSMIMIGEIGGSAEEEAAQFLKDEAKKGRS 240 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP VGF+AG+TAP GRTMGHAGAV+SGGKGGAEDKI AM+ AGI ++PSPA++G++LVEL Sbjct: 241 KPTVGFIAGRTAPKGRTMGHAGAVVSGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEL 300 Query: 297 L 297 L Sbjct: 301 L 301 >gi|188580839|ref|YP_001924284.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium populi BJ001] gi|179344337|gb|ACB79749.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium populi BJ001] Length = 294 Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust. Identities = 223/297 (75%), Positives = 256/297 (86%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+NTKV+ QG TGK GTFH+EQAI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDQNTKVICQGFTGKNGTFHSEQAIAY-GTKMVGGTSPGKGGSQHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E T A+ASV+YVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK LE S Sbjct: 56 TVAEAREATGADASVVYVPPPGAADAICEAIQAEIPLIVCITEGIPVLDMVRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T KIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+ EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVVTAGESKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTVEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFI +LELFLADE T+SIVM+GEIGGSAEEEAAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFISMLELFLADEKTQSIVMIGEIGGSAEEEAAQFLADEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPAR+GR+LVE+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPARLGRTLVEVL 292 >gi|304394257|ref|ZP_07376180.1| succinyl-CoA ligase, alpha subunit [Ahrensia sp. R2A130] gi|303293697|gb|EFL88074.1| succinyl-CoA ligase, alpha subunit [Ahrensia sp. R2A130] Length = 300 Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust. Identities = 220/298 (73%), Positives = 260/298 (87%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSIL+DKNTK++VQGLTGK GTFHTEQA+ Y TQ+V G HPKKG T W + +P+F Sbjct: 1 MSILIDKNTKIIVQGLTGKTGTFHTEQALAYHGTQMVAGTHPKKGGTDWESADGAKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TTVA+AKE+T ANASVIYVPP+G AI E+I+AEIPLIV ITEG+PVLDMVRVK +L+K Sbjct: 61 TTVADAKEKTGANASVIYVPPAGCAAAIEEAIDAEIPLIVAITEGVPVLDMVRVKEKLDK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPG++TPD CKIGIMPGSIF+ G+VGI+SRSGTLTYEAVFQT+ GLGQ+T Sbjct: 121 SKSRLIGPNCPGVMTPDECKIGIMPGSIFKDGNVGIVSRSGTLTYEAVFQTTNAGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFID+LE+FLADE T+SI+M+GEIGGSAEE+AAQFL DEAK+GR KP Sbjct: 181 AVGIGGDPVKGTEFIDMLEMFLADEETKSIIMIGEIGGSAEEDAAQFLADEAKKGRMKPT 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG TAPPGRTMGHAGAV+SGGKG A KI AM+ AGI ++PSPA++G +L++LL Sbjct: 241 VGFIAGVTAPPGRTMGHAGAVVSGGKGDAPSKIAAMEAAGIRVSPSPAKLGETLLDLL 298 >gi|114798328|ref|YP_759041.1| succinyl-CoA synthetase subunit alpha [Hyphomonas neptunium ATCC 15444] gi|114738502|gb|ABI76627.1| succinyl-CoA synthetase, alpha subunit [Hyphomonas neptunium ATCC 15444] Length = 300 Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust. Identities = 220/298 (73%), Positives = 261/298 (87%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSIL+DKNTKVL QG+TG G+FHT QA+ Y TQ+VGGIHPKKG W N +P+F Sbjct: 1 MSILIDKNTKVLTQGMTGNTGSFHTNQALAYYGTQMVGGIHPKKGGEMWKADNGQELPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE KE+T A ASV+YVPP+GA AI E+I+AEIPLIVCITEG+PV+DMVRVKA+L K Sbjct: 61 ASVAEGKEKTGATASVVYVPPAGAAAAIEEAIDAEIPLIVCITEGVPVMDMVRVKAKLAK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGI+T ++CKIGIMPGSIF+KGSVGI+SRSGTLTYEAVFQT+ GLGQ+T Sbjct: 121 SKSRLIGPNCPGIITANACKIGIMPGSIFKKGSVGIVSRSGTLTYEAVFQTTNAGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFID+LE+FLAD+ T+SI+M+GEIGGSAEEEAAQFL DEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDILEMFLADDETQSIIMIGEIGGSAEEEAAQFLMDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGRTMGHAGA++SGGKG AE KI AM+ AGI ++PSPAR+G +LVE+L Sbjct: 241 AGFIAGRTAPPGRTMGHAGAIVSGGKGDAESKIAAMEAAGIRVSPSPARLGTTLVEVL 298 >gi|163761407|ref|ZP_02168481.1| succinyl-CoA synthetase subunit alpha [Hoeflea phototrophica DFL-43] gi|162281402|gb|EDQ31699.1| succinyl-CoA synthetase subunit alpha [Hoeflea phototrophica DFL-43] Length = 300 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 224/298 (75%), Positives = 264/298 (88%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSIL++K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG + W G G +P+F Sbjct: 1 MSILINKDTKVLVQGLTGKTGTFHTEQALAYHGTQMVGGIHPKKGGSTWEGSGGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE K T ANASVIYVPP+GA AIIE+IEAEI LIVCITEGIPV DM+R K L+K Sbjct: 61 ASVAEGKSATGANASVIYVPPAGAAAAIIEAIEAEIELIVCITEGIPVADMIRAKDVLDK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPG++TPD CKIGIMPG+IF+KGSVGILSRSGTLTYEAVFQT+ EGLGQS+ Sbjct: 121 SKSRLIGPNCPGVMTPDECKIGIMPGNIFKKGSVGILSRSGTLTYEAVFQTTNEGLGQSS 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFID+L+L+L D TESI+M+GEIGGSAEE+AA++L ++AK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDILDLYLDDPETESIIMIGEIGGSAEEDAAEWLIEQAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIKAMEAAGIRVSPSPARLGKTLVEVL 298 >gi|154244113|ref|YP_001415071.1| succinyl-CoA synthetase, alpha subunit [Xanthobacter autotrophicus Py2] gi|154244448|ref|YP_001415406.1| succinyl-CoA synthetase, alpha subunit [Xanthobacter autotrophicus Py2] gi|154158198|gb|ABS65414.1| succinyl-CoA synthetase, alpha subunit [Xanthobacter autotrophicus Py2] gi|154158533|gb|ABS65749.1| succinyl-CoA synthetase, alpha subunit [Xanthobacter autotrophicus Py2] Length = 294 Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust. Identities = 217/297 (73%), Positives = 256/297 (86%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+D NT+V+ QG TGK GTFH +QAI Y T++VGG P KG T ++N+PVF Sbjct: 1 MSVLIDANTRVITQGFTGKNGTFHAQQAIAYG-TKMVGGTSPGKGGTT----HLNLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAKE T A+ASVIYVPP GA DAI+E+I+AEIPLIVCITEGIPVLDMV+VK L S Sbjct: 56 TVIEAKEATGADASVIYVPPPGAADAILEAIDAEIPLIVCITEGIPVLDMVKVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+T KIGIMP +IF+ GSVG++SRSGTLTYEAVFQTSQEGLGQ++A Sbjct: 116 KSRLVGPNCPGIVTAGQSKIGIMPANIFKTGSVGVVSRSGTLTYEAVFQTSQEGLGQTSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD TESI+M+GEIGGSAEEEAAQF+ DEAK+GRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADPKTESIIMIGEIGGSAEEEAAQFIADEAKKGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPARLGKTLVEVL 292 >gi|170747354|ref|YP_001753614.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium radiotolerans JCM 2831] gi|170653876|gb|ACB22931.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium radiotolerans JCM 2831] Length = 294 Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust. Identities = 222/297 (74%), Positives = 251/297 (84%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+++D NTKV+ QG TGK GTFH+EQAI Y T++VGG P KG + G +PVF Sbjct: 1 MSVMIDANTKVICQGFTGKNGTFHSEQAIAY-GTKMVGGTSPGKGGSSHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E T A ASV+YVPP GA DAI E+I AE+PLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVAEAREATGAEASVVYVPPPGAADAICEAIAAEVPLIVCITEGIPVLDMVRVKRALTGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+T KIGIMP +IFR GSVGI+SRSGTLTYEAVFQTS GLGQ+TA Sbjct: 116 KSRLVGPNCPGIVTAGESKIGIMPANIFRPGSVGIVSRSGTLTYEAVFQTSNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLELFLAD TESIVM+GEIGGSAEEEAAQFLKDEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLELFLADPKTESIVMIGEIGGSAEEEAAQFLKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPAR+G +LVE+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPARLGSTLVEVL 292 >gi|220921133|ref|YP_002496434.1| succinyl-CoA synthetase subunit alpha [Methylobacterium nodulans ORS 2060] gi|219945739|gb|ACL56131.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium nodulans ORS 2060] Length = 294 Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust. Identities = 220/297 (74%), Positives = 255/297 (85%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TGK GTFH+EQAI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGKNGTFHSEQAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E T A+ASV+YVPP GA DAI E+I+AEIPLIVCITEGIPVLDMV+VK L+ S Sbjct: 56 TVAEAREATGADASVVYVPPPGAADAICEAIQAEIPLIVCITEGIPVLDMVKVKRALDGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+T KIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+ GLGQ+TA Sbjct: 116 KSRLVGPNCPGIVTAGESKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTSAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFID+LE FLADE TESIVM+GEIGGSAEE+AAQF+ DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDMLEKFLADEKTESIVMIGEIGGSAEEDAAQFIADEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPAR+G++LVELL Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPARLGKTLVELL 292 >gi|218529902|ref|YP_002420718.1| succinyl-CoA synthetase, subunit alpha [Methylobacterium chloromethanicum CM4] gi|240138206|ref|YP_002962678.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium extorquens AM1] gi|218522205|gb|ACK82790.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium chloromethanicum CM4] gi|240008175|gb|ACS39401.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium extorquens AM1] Length = 295 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 222/299 (74%), Positives = 255/299 (85%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+NTKV+ QG TGK GTFH+EQAI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDQNTKVICQGFTGKNGTFHSEQAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E T A+ASV+YVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK LE S Sbjct: 56 TVAEAREATGADASVVYVPPPGAADAICEAIQAEIPLIVCITEGIPVLDMVRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T KIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+ EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVVTAGQSKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTVEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFI +LELFLAD TESIVM+GEIGGSAEEEAAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFISMLELFLADPKTESIVMIGEIGGSAEEEAAQFLADEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPAR+G +LV++L S Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPARLGSTLVDVLKS 294 >gi|94496915|ref|ZP_01303489.1| succinyl-CoA synthetase, alpha subunit [Sphingomonas sp. SKA58] gi|94423591|gb|EAT08618.1| succinyl-CoA synthetase, alpha subunit [Sphingomonas sp. SKA58] Length = 294 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 217/297 (73%), Positives = 252/297 (84%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+ QG+TG GTFHTEQA+ Y TQ+V G+ P KG T G +P+F Sbjct: 1 MSILVNKNTKVITQGMTGATGTFHTEQALAY-GTQMVAGVTPGKGGTSHIG----LPMFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK +T A+ASVIYVPP A D+I+E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVAEAKSKTGADASVIYVPPPFAADSILEAIDAEIPLIVCITEGIPVLDMVRVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTPD CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQTS GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPDECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTSNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELFLAD+ATESI+M+GEIGG AEE+AAQFL DEAK+GRKKP+ Sbjct: 176 VGIGGDPVNGTNFIDVLELFLADDATESIIMIGEIGGDAEEQAAQFLIDEAKKGRKKPMA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGGKG AE KI AM+ AGI +A SP+ +G +LVE+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGDAESKIAAMEAAGIKVAASPSELGSTLVEVL 292 >gi|87199203|ref|YP_496460.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Novosphingobium aromaticivorans DSM 12444] gi|87134884|gb|ABD25626.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Novosphingobium aromaticivorans DSM 12444] Length = 296 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 218/297 (73%), Positives = 253/297 (85%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNTKV+ QG+TG GTFHTEQA+ Y TQ+VGG+ P KG T G +P F Sbjct: 1 MSILVDKNTKVITQGMTGATGTFHTEQALAY-GTQMVGGVTPGKGGTTHIG----LPNFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK T A AS IYVPP A D+I+E+I+AE+ LIVCITEGIPVLDMV+VK L S Sbjct: 56 TVAEAKAATGATASCIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMVKVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQTS GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPNECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTSNIGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELFLAD+ T+SI+M+GEIGGSAEEEAAQFLKDEAKRGRKKP+V Sbjct: 176 VGIGGDPVNGTNFIDVLELFLADDETKSIIMIGEIGGSAEEEAAQFLKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGG+GGAEDKI AM+EAGI ++PSP+ +G +L E+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGQGGAEDKIAAMEEAGIRVSPSPSLLGETLAEVL 292 >gi|163851072|ref|YP_001639115.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium extorquens PA1] gi|163662677|gb|ABY30044.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium extorquens PA1] Length = 295 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 222/299 (74%), Positives = 255/299 (85%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+NTKV+ QG TGK GTFH+EQAI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDQNTKVICQGFTGKNGTFHSEQAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E T A+ASV+YVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK LE S Sbjct: 56 TVAEAREATGADASVVYVPPPGAADAICEAIQAEIPLIVCITEGIPVLDMVRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T KIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+ EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVVTAGQSKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTVEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFI +LELFLAD TESIVM+GEIGGSAEEEAAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIAMLELFLADPKTESIVMIGEIGGSAEEEAAQFLADEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPAR+G +LV++L S Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPARLGSTLVDVLKS 294 >gi|296447746|ref|ZP_06889661.1| succinyl-CoA synthetase, alpha subunit [Methylosinus trichosporium OB3b] gi|296254723|gb|EFH01835.1| succinyl-CoA synthetase, alpha subunit [Methylosinus trichosporium OB3b] Length = 294 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 211/297 (71%), Positives = 261/297 (87%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TGK GTFH+EQAILY T++VGG+ P KG + ++++PVF Sbjct: 1 MSVLIDKNTKVICQGFTGKNGTFHSEQAILY-GTRMVGGVSPGKGGSK----HLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E+T A+ASVIYVPP GA DAI E+I+AEIPLIV ITEG+PV DM+RV+ L S Sbjct: 56 TVAEAREKTGADASVIYVPPPGAADAICEAIDAEIPLIVAITEGVPVHDMIRVRRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMPG+IF GSVG++SRSGTLTYEAVFQT++EGLGQ++A Sbjct: 116 KSRLIGPNCPGVVTAGECKIGIMPGNIFSNGSVGVVSRSGTLTYEAVFQTTREGLGQTSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGT+FI+VLELFLAD+AT+SI+M+GEIGGSAEE+AA+FL+DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTDFIEVLELFLADDATKSIIMIGEIGGSAEEDAAEFLRDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGDAESKIAAMESAGIRVSPSPARLGKTLVEML 292 >gi|315497283|ref|YP_004086087.1| succinyl-CoA synthetase, alpha subunit [Asticcacaulis excentricus CB 48] gi|315415295|gb|ADU11936.1| succinyl-CoA synthetase, alpha subunit [Asticcacaulis excentricus CB 48] Length = 294 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 215/297 (72%), Positives = 254/297 (85%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++ TKV+ QG TG GTFH+EQAI Y T+VVGG+ P KG T ++ +PVF Sbjct: 1 MSVLINSQTKVITQGFTGAQGTFHSEQAIAY-GTKVVGGVTPGKGGTT----HIGLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEAKERT A+AS IYVPP A DAI+E+IEAEIPLIVCITEGIPVLDMV+VK L S Sbjct: 56 SVAEAKERTGADASAIYVPPPFAADAILEAIEAEIPLIVCITEGIPVLDMVKVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP+ CKIGIMPG+IF KGSVG++SRSGTLTYEAVFQT+ GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPNECKIGIMPGNIFSKGSVGVVSRSGTLTYEAVFQTTNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD+ T+SI+M+GEIGGSAEE+AAQFL DEAKRGRKKP+ Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADDETKSIIMIGEIGGSAEEDAAQFLIDEAKRGRKKPMA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPA +G +L+ +L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIKVSPSPAALGETLLSVL 292 >gi|254560766|ref|YP_003067861.1| succinyl-CoA synthetase subunit alpha [Methylobacterium extorquens DM4] gi|254268044|emb|CAX23915.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium extorquens DM4] Length = 295 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 221/299 (73%), Positives = 255/299 (85%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+NTKV+ QG TGK GTFH+EQAI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDQNTKVICQGFTGKNGTFHSEQAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA++ T A+ASV+YVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK LE S Sbjct: 56 TVAEARDATGADASVVYVPPPGAADAICEAIQAEIPLIVCITEGIPVLDMVRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T KIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+ EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVVTAGQSKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTVEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFI +LELFLAD TESIVM+GEIGGSAEEEAAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIAMLELFLADPKTESIVMIGEIGGSAEEEAAQFLADEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPAR+G +LV++L S Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPARLGSTLVDVLKS 294 >gi|332188903|ref|ZP_08390607.1| succinate-CoA ligase, alpha subunit [Sphingomonas sp. S17] gi|332011063|gb|EGI53164.1| succinate-CoA ligase, alpha subunit [Sphingomonas sp. S17] Length = 294 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 213/297 (71%), Positives = 253/297 (85%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+ QG+TG+ GTFHT+QA+ Y TQ+VGG+ P KG T G +P+F Sbjct: 1 MSILVNKNTKVITQGMTGETGTFHTQQALAYG-TQMVGGVTPGKGGTQHIG----LPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK +T A+ASVIYVPP A D+I+E+I+AEIPLIV ITEGIPVLDMV+VK L S Sbjct: 56 TVAEAKSKTGADASVIYVPPPFAADSILEAIDAEIPLIVAITEGIPVLDMVKVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQTS GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPGECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTSNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELFLAD+ T+SI+M+GEIGGSAEEEAAQFL+DEAKRGR KP+ Sbjct: 176 VGIGGDPVNGTNFIDVLELFLADDETQSIIMIGEIGGSAEEEAAQFLRDEAKRGRSKPMA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGG+GGAEDKI AM+ AGI +A SP+ +G +L+ +L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGQGGAEDKIAAMEAAGIKVAASPSELGSTLLSVL 292 >gi|323135996|ref|ZP_08071079.1| succinyl-CoA synthetase, alpha subunit [Methylocystis sp. ATCC 49242] gi|322399087|gb|EFY01606.1| succinyl-CoA synthetase, alpha subunit [Methylocystis sp. ATCC 49242] Length = 294 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 213/297 (71%), Positives = 259/297 (87%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TGK TFH+ QA+ Y T++VGG+ P KG + ++++PVF Sbjct: 1 MSVLIDKNTKVITQGFTGKTATFHSVQAMDY-GTKMVGGVSPGKGGST----HLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E+T A+ASV+YVPP GA DAI E+IEAEIPLIVCITEG+PV DM+RVK L S Sbjct: 56 TVAEAREKTGADASVVYVPPPGAADAICEAIEAEIPLIVCITEGVPVQDMIRVKRALCGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T KIGIMPG+IF +GSVG++SRSGTLTYEAVFQT++EGLGQ++A Sbjct: 116 KSRLIGPNCPGVVTAGESKIGIMPGNIFSRGSVGVVSRSGTLTYEAVFQTTREGLGQTSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGT+FI+VLELFLADEAT+SI+M+GEIGGSAEEEAAQFLKDEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTDFIEVLELFLADEATKSIIMIGEIGGSAEEEAAQFLKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGDAESKIAAMESAGIRVSPSPARLGKTLVEVL 292 >gi|326386304|ref|ZP_08207928.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Novosphingobium nitrogenifigens DSM 19370] gi|326209529|gb|EGD60322.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Novosphingobium nitrogenifigens DSM 19370] Length = 296 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 215/297 (72%), Positives = 256/297 (86%), Gaps = 3/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+ QG+TGK GTFHT+QA+ Y TQ+VGG+ P KG + T + +P++ Sbjct: 1 MSILVNKDTKVITQGMTGKTGTFHTQQALAYG-TQMVGGVTPGKGGS--THEDTGLPIWD 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK + A ASVIYVPP A D+I+E+I+AEI LIV ITEGIPVLDMVRVK L+ S Sbjct: 58 TVAEAKAASGATASVIYVPPPFAADSILEAIDAEIELIVAITEGIPVLDMVRVKRALQGS 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP CKIGIMPGSIFRKGSVG++SRSGTLTYEAVFQTS GLGQ+TA Sbjct: 118 KSRLIGPNCPGVLTPGECKIGIMPGSIFRKGSVGVVSRSGTLTYEAVFQTSNIGLGQTTA 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELFLADE T+SI+M+GEIGG+AEE+AAQFLKDEAKRGRKKP+V Sbjct: 178 VGIGGDPVNGTNFIDVLELFLADEETKSIIMIGEIGGNAEEQAAQFLKDEAKRGRKKPMV 237 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGG+GGAEDKI AM+EAGI ++PSP+ +G +L E+L Sbjct: 238 GFIAGRTAPPGRRMGHAGAIVSGGQGGAEDKIAAMEEAGIRVSPSPSLLGETLAEVL 294 >gi|27375564|ref|NP_767093.1| succinyl-CoA synthetase subunit alpha [Bradyrhizobium japonicum USDA 110] gi|27348701|dbj|BAC45718.1| succinyl-CoA synthetase alpha chain [Bradyrhizobium japonicum USDA 110] Length = 294 Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust. Identities = 217/297 (73%), Positives = 249/297 (83%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TGK GTFH+E AI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A+E+T A+ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPV+DMVRVK L S Sbjct: 56 TVRDAREKTGADASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVIDMVRVKRSLAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ GSVGI+SRSGTLTYEAVFQTSQEGLGQ+TA Sbjct: 116 KSRLIGPNCPGVMTAGECKIGIMPANIFKTGSVGIVSRSGTLTYEAVFQTSQEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+ LAD TESI+M+GEIGGSAEE+AAQFLKDEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMLLADPKTESIIMIGEIGGSAEEDAAQFLKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPGR MGHAGA+ISGGKG A K +AMK AGI ++PSPAR+G +L E L Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAGSKTDAMKSAGITVSPSPARLGHTLAEKL 292 >gi|115522326|ref|YP_779237.1| succinyl-CoA synthetase, alpha subunit [Rhodopseudomonas palustris BisA53] gi|115516273|gb|ABJ04257.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodopseudomonas palustris BisA53] Length = 294 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 216/297 (72%), Positives = 249/297 (83%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+D NTKV+ QG TGK GTFH+E A+ Y T++VGG P KG + G +PVF Sbjct: 1 MSVLIDSNTKVICQGFTGKNGTFHSEAAVAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+E+T A ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVKEAREQTGAEASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRSLSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+QEGLGQ+TA Sbjct: 116 KSRLIGPNCPGVVTAGQCKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTQEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLADE T SIVM+GEIGGSAEEEAAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADEKTHSIVMIGEIGGSAEEEAAQFLIDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGGKG A KI AM+ AGI ++PSPAR+G++L E L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGDAGSKIAAMEAAGIIVSPSPARLGKTLAERL 292 >gi|148554220|ref|YP_001261802.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Sphingomonas wittichii RW1] gi|148499410|gb|ABQ67664.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Sphingomonas wittichii RW1] Length = 294 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 213/297 (71%), Positives = 252/297 (84%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+ QG+TG GTFHTEQA+ Y TQ+VGG+ P KG T G +P F Sbjct: 1 MSILVNKNTKVITQGMTGNTGTFHTEQALAY-GTQMVGGVTPGKGGTTHIG----LPNFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A+ASVIYVPP A D+I+E+I+AE+PLIVCITEGIPV+DM+RVK L+ S Sbjct: 56 TVHEAVAATGADASVIYVPPPFAADSILEAIDAEVPLIVCITEGIPVIDMIRVKRALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQTS GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPNECKIGIMPGSIFQKGSVGVVSRSGTLTYEAVFQTSAIGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELFLAD+ T+SI+M+GEIGGSAEEEAAQFL+DEAKRGRKKP+ Sbjct: 176 VGIGGDPVNGTNFIDVLELFLADDETKSIIMIGEIGGSAEEEAAQFLRDEAKRGRKKPMA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGG+GGAEDKI AM+ AGI +A SP+ +G +L E+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGQGGAEDKIAAMEAAGIKVAASPSELGTTLAEVL 292 >gi|91975019|ref|YP_567678.1| succinyl-CoA synthetase, alpha subunit [Rhodopseudomonas palustris BisB5] gi|91681475|gb|ABE37777.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodopseudomonas palustris BisB5] Length = 294 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 215/297 (72%), Positives = 251/297 (84%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NTKV+ QG TGK GTFH+E A+ Y T++VGG P KG T G +PVF Sbjct: 1 MSILIDANTKVICQGFTGKNGTFHSEAAVAY-GTKMVGGTSPGKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+++T A+ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVREARDKTGADASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRSLVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF++GSVGI+SRSGTLTYEAVFQT+ EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVMTAGECKIGIMPANIFKQGSVGIVSRSGTLTYEAVFQTTSEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD+ T SI+M+GEIGGSAEEEAAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADDKTTSIIMIGEIGGSAEEEAAQFLIDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPGR MGHAGA+ISGGKG A K +AM+ AGI ++PSPAR+G++LVE+L Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAASKTSAMEAAGITVSPSPARLGKTLVEVL 292 >gi|167644202|ref|YP_001681865.1| succinyl-CoA synthetase subunit alpha [Caulobacter sp. K31] gi|167346632|gb|ABZ69367.1| succinyl-CoA synthetase, alpha subunit [Caulobacter sp. K31] Length = 294 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 210/297 (70%), Positives = 255/297 (85%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ TKV+ QG+TG GTFH+EQAI Y T++VGG+ P KG ++ +PVF Sbjct: 1 MSILIGSQTKVICQGITGAQGTFHSEQAIAY-GTKMVGGVTPGKGGQT----HIGLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+E T A+A+ IYVPP A D+I+E+I+AEIPLI+CITEGIPVLDMV+VK L+ S Sbjct: 56 TVGEAREATGADATAIYVPPPFAADSILEAIDAEIPLIICITEGIPVLDMVKVKKALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP+ CKIGIMPGSIF +GSVG++SRSGTLTYEAVFQT+ GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPNQCKIGIMPGSIFSQGSVGVVSRSGTLTYEAVFQTTNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFID+LELFLAD+AT+SIVM+GEIGGSAEE+AAQF+ DEAKRGR KP+V Sbjct: 176 VGIGGDPVKGTEFIDILELFLADDATKSIVMIGEIGGSAEEDAAQFIADEAKRGRSKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPA++G +L+E+L Sbjct: 236 GFIAGRTAPPGRHMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPAKLGETLLEVL 292 >gi|148252002|ref|YP_001236587.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Bradyrhizobium sp. BTAi1] gi|146404175|gb|ABQ32681.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Bradyrhizobium sp. BTAi1] Length = 294 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 216/299 (72%), Positives = 251/299 (83%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TGK GTFH+E AI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+E T A+ASVIYVPP GA DAI E+I+AE+PLIVCITEGIPVLDMVRVK L+ S Sbjct: 56 TVKEAREATGADASVIYVPPPGAADAICEAIDAEVPLIVCITEGIPVLDMVRVKRSLQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+ EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVMTAGECKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTSEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFID+LE+FLAD TESI+M+GEIGGSAEE+AAQF+KDEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDMLEMFLADPKTESIIMIGEIGGSAEEDAAQFIKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++LVE L S Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAGSKTAAMEAAGITVSPSPARLGKTLVEKLKS 294 >gi|299133569|ref|ZP_07026763.1| succinyl-CoA synthetase, alpha subunit [Afipia sp. 1NLS2] gi|298591405|gb|EFI51606.1| succinyl-CoA synthetase, alpha subunit [Afipia sp. 1NLS2] Length = 302 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 211/297 (71%), Positives = 252/297 (84%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+++DKNTKV+ QG TGK GTFH+E AI Y T++VGG P KG + G +PVF Sbjct: 1 MSVMIDKNTKVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA+ +T A+ASV+YVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 SVAEARAKTGADASVVYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPG++T CKIGIMP +IF+ G+VGI+SRSGTLTYEAVFQT+Q G GQ+TA Sbjct: 116 KSRLLGPNCPGVVTAGECKIGIMPTNIFKPGNVGIVSRSGTLTYEAVFQTTQVGFGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD+ TESI+M+GEIGGSAEE+AAQFLKDEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADDKTESIIMIGEIGGSAEEDAAQFLKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AM+ AGI ++ SPAR+G +LVELL Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIAAMEAAGIAVSASPARLGSTLVELL 292 >gi|316931840|ref|YP_004106822.1| succinyl-CoA synthetase subunit alpha [Rhodopseudomonas palustris DX-1] gi|315599554|gb|ADU42089.1| succinyl-CoA synthetase, alpha subunit [Rhodopseudomonas palustris DX-1] Length = 294 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 216/299 (72%), Positives = 248/299 (82%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NT+V+ QG TGK GTFH+E AI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDSNTRVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+E+T A+ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVREAREKTGADASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRSLNGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ GSVGI+SRSGTLTYEAVFQTS EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVMTAGECKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTSAEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD+ TESI+M+GEIGGSAEE+AAQFL DEAKRGRKKP V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADDKTESIIMIGEIGGSAEEDAAQFLIDEAKRGRKKPTV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++L E L S Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAASKTAAMEAAGITVSPSPARLGKTLAEKLKS 294 >gi|86747405|ref|YP_483901.1| succinyl-CoA synthetase, alpha subunit [Rhodopseudomonas palustris HaA2] gi|86570433|gb|ABD04990.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodopseudomonas palustris HaA2] Length = 294 Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust. Identities = 216/299 (72%), Positives = 249/299 (83%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NTKV+ QG TGK GTFH+E A+ Y T++VGG P KG T G +PVF Sbjct: 1 MSILIDANTKVICQGFTGKNGTFHSEAAVAY-GTKMVGGTSPGKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+++T A+ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVREARDKTGADASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRSLVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+ EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVMTAGECKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTSEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD+ TESI+M+GEIGGSAEEEAAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADDKTESIIMIGEIGGSAEEEAAQFLIDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++L E L S Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAASKTAAMEAAGITVSPSPARLGKTLAEKLKS 294 >gi|146337551|ref|YP_001202599.1| succinyl-CoA synthetase subunit alpha, NAD(P)-binding [Bradyrhizobium sp. ORS278] gi|146190357|emb|CAL74353.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Bradyrhizobium sp. ORS278] Length = 294 Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust. Identities = 216/299 (72%), Positives = 250/299 (83%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TGK GTFH+E AI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+E T A+ASVIYVPP GA DAI E+I+AE+PLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVKEAREATGADASVIYVPPPGAADAICEAIDAEVPLIVCITEGIPVLDMVRVKRSLVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+ EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVMTAGECKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTSEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFID+LE+FLAD TESI+M+GEIGGSAEE+AAQF+KDEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDMLEMFLADPKTESIIMIGEIGGSAEEDAAQFIKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++LVE L S Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAGSKTAAMEAAGITVSPSPARLGKTLVEKLKS 294 >gi|85713705|ref|ZP_01044695.1| succinyl-CoA ligase, alpha subunit [Nitrobacter sp. Nb-311A] gi|85699609|gb|EAQ37476.1| succinyl-CoA ligase, alpha subunit [Nitrobacter sp. Nb-311A] Length = 294 Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust. Identities = 215/299 (71%), Positives = 251/299 (83%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNT+V+ QG TGK GTFH+E AI Y T++VGG P KG ++++PVF Sbjct: 1 MSILIDKNTRVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGQT----HLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+E T A+ASV+YVPP+GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVREAREATGADASVVYVPPAGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRSLSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ G+VGI+SRSGTLTYEAVFQTSQEGLGQ+TA Sbjct: 116 KSRLIGPNCPGVVTAGECKIGIMPANIFKTGNVGIVSRSGTLTYEAVFQTSQEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD T +IVM+GEIGGSAEE+AAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADPKTSAIVMIGEIGGSAEEDAAQFLIDEAKRGRKKPVV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++LVE L S Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAVSKTAAMEAAGIVVSPSPARLGKTLVEKLKS 294 >gi|192288618|ref|YP_001989223.1| succinyl-CoA synthetase, alpha subunit [Rhodopseudomonas palustris TIE-1] gi|192282367|gb|ACE98747.1| succinyl-CoA synthetase, alpha subunit [Rhodopseudomonas palustris TIE-1] Length = 294 Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust. Identities = 215/299 (71%), Positives = 249/299 (83%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NT+V+ QG TGK GTFH+E AI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDSNTRVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+++T A+ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVREARDKTGADASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRSLNGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ GSVGI+SRSGTLTYEAVFQTS EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVMTAGECKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTSAEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD+ TESI+M+GEIGGSAEE+AAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADDKTESIIMIGEIGGSAEEDAAQFLIDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++L E L S Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAASKTAAMEAAGITVSPSPARLGKTLAEKLKS 294 >gi|39933267|ref|NP_945543.1| succinyl-CoA synthetase subunit alpha [Rhodopseudomonas palustris CGA009] gi|39652892|emb|CAE25634.1| succinyl-CoA synthetase alpha-subunit [Rhodopseudomonas palustris CGA009] Length = 294 Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust. Identities = 215/299 (71%), Positives = 249/299 (83%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NT+V+ QG TGK GTFH+E AI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDSNTRVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+++T A+ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVREARDKTGADASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRSLNGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ GSVGI+SRSGTLTYEAVFQTS EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVMTAGECKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTSAEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD+ TESI+M+GEIGGSAEE+AAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADDNTESIIMIGEIGGSAEEDAAQFLIDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++L E L S Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAASKTAAMEAAGITVSPSPARLGKTLAEKLKS 294 >gi|294012419|ref|YP_003545879.1| succinyl-CoA synthetase alpha chain [Sphingobium japonicum UT26S] gi|292675749|dbj|BAI97267.1| succinyl-CoA synthetase alpha chain [Sphingobium japonicum UT26S] Length = 294 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 213/297 (71%), Positives = 250/297 (84%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+ QG+TG GTFHTE A+ Y TQ+VGG+ P KG T G +P+F Sbjct: 1 MSILVNKNTKVITQGMTGATGTFHTETALAY-GTQMVGGVTPGKGGTTHIG----LPMFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK +T A+ASVIYVPP A D+I+E+I+AEIPLIVCITEGIPVLDMV+VK L S Sbjct: 56 TVAEAKAKTGADASVIYVPPPFAADSILEAIDAEIPLIVCITEGIPVLDMVKVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP CKIGIMPG+IF KGSVG++SRSGTLTYEAVFQTS GLGQ+TA Sbjct: 116 KSRLIGPNCPGLLTPGECKIGIMPGNIFSKGSVGVVSRSGTLTYEAVFQTSNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELFLAD+ATESI+M+GEIGG AEE+AAQFL DEAK+GRKKP+ Sbjct: 176 VGIGGDPVNGTNFIDVLELFLADDATESIIMIGEIGGDAEEQAAQFLIDEAKKGRKKPMA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGGKG AE KI AM+ AGI +A SP+ +G +L+E+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGDAESKIAAMEAAGIKVAASPSELGTTLLEVL 292 >gi|307293436|ref|ZP_07573282.1| succinyl-CoA synthetase, alpha subunit [Sphingobium chlorophenolicum L-1] gi|306881502|gb|EFN12718.1| succinyl-CoA synthetase, alpha subunit [Sphingobium chlorophenolicum L-1] Length = 294 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 212/297 (71%), Positives = 250/297 (84%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+ QG+TG GTFHTE A+ Y TQ+VGG+ P KG T G +P+F Sbjct: 1 MSILVNKNTKVITQGMTGATGTFHTETALAY-GTQMVGGVTPGKGGTSHIG----LPMFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK +T A+ASVIYVPP A D+I+E+I+AEIPLIVCITEGIPVLDMV+VK L S Sbjct: 56 TVAEAKSKTGADASVIYVPPPFAADSILEAIDAEIPLIVCITEGIPVLDMVKVKRSLSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP CKIGIMPG+IF KGSVG++SRSGTLTYEAVFQT+ GLGQ+TA Sbjct: 116 KSRLIGPNCPGLLTPGECKIGIMPGNIFSKGSVGVVSRSGTLTYEAVFQTTNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELFLAD+ATESI+M+GEIGG AEE+AAQFL DEAK+GRKKP+ Sbjct: 176 VGIGGDPVNGTNFIDVLELFLADDATESIIMIGEIGGDAEEQAAQFLIDEAKKGRKKPMA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGGKG AE KI AM+ AGI +A SP+ +G +L+E+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGDAESKIAAMEAAGIKVAASPSELGTTLLEVL 292 >gi|329847466|ref|ZP_08262494.1| succinyl-CoA ligase ADP-forming subunit alpha [Asticcacaulis biprosthecum C19] gi|328842529|gb|EGF92098.1| succinyl-CoA ligase ADP-forming subunit alpha [Asticcacaulis biprosthecum C19] Length = 295 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 211/300 (70%), Positives = 253/300 (84%), Gaps = 5/300 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++ TKV+ QGLTG GTFHTEQAI Y T++VGG+ P KG +V +PV+ Sbjct: 1 MSVLINSETKVICQGLTGSQGTFHTEQAIAY-GTKMVGGVTPGKGGQT----HVGLPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK+RT A A+ IYVPP A D+I+E+IEAE+ LIVCITEGIPVLDMV+VK L+ S Sbjct: 56 TVAEAKDRTGATATAIYVPPPFAADSILEAIEAEMELIVCITEGIPVLDMVKVKKALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP+ CKIGIMPG+IF GSVG++SRSGTLTYEAVFQT+ GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPNQCKIGIMPGNIFSPGSVGVVSRSGTLTYEAVFQTTNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD+AT+SI+M+GEIGG AEE+AAQFL+DEAKRGR KP+ Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADDATKSIIMIGEIGGQAEEDAAQFLRDEAKRGRIKPMA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI +APSPA +G +L+ +L L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVAPSPAALGETLLNVLKGL 295 >gi|209885675|ref|YP_002289532.1| succinyl-CoA ligase [Oligotropha carboxidovorans OM5] gi|209873871|gb|ACI93667.1| succinyl-CoA ligase [Oligotropha carboxidovorans OM5] Length = 302 Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust. Identities = 207/297 (69%), Positives = 249/297 (83%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+++DKNTKV+ QG TGK GTFH+E AI Y T++VGG P KG G +PVF Sbjct: 1 MSVMIDKNTKVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGQTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V+EA+ +T A+ASV+YVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 SVSEARAKTGADASVVYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPG++T CKIGIMP +IF+ G+VGI+SRSGTLTYEAVFQT+Q G GQ+TA Sbjct: 116 KSRLLGPNCPGVVTAGECKIGIMPTNIFKPGNVGIVSRSGTLTYEAVFQTTQAGFGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD+ TESI+M+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADDKTESIIMIGEIGGSAEEDAAQFLKDEAKRGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AM+ AGI ++ SPAR+G +L +LL Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIAAMEAAGIAVSASPARLGSTLADLL 292 >gi|103487710|ref|YP_617271.1| succinyl-CoA synthetase, alpha subunit [Sphingopyxis alaskensis RB2256] gi|98977787|gb|ABF53938.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Sphingopyxis alaskensis RB2256] Length = 296 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 209/297 (70%), Positives = 248/297 (83%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG+TG GTFHTEQA+ Y T++VGG+ P KG T G +P+F Sbjct: 1 MSILIDKNTKVITQGMTGATGTFHTEQALAY-GTKMVGGVTPGKGGTTHIG----LPMFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A ASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDMV+VK L S Sbjct: 56 TVEEAKHATGATASVIYVPPPFAADSILEAIDAEVELIVCITEGIPVLDMVKVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNVGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELFLAD+AT+SI+M+GEIGG AEE+AAQFL DEAKRGRKKP+ Sbjct: 176 VGIGGDPVNGTNFIDVLELFLADDATKSIIMIGEIGGDAEEQAAQFLIDEAKRGRKKPMA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGGKG AE KI AM+ AGI ++ SP+ +G +L E+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGDAESKIAAMEAAGIKVSASPSELGTTLAEVL 292 >gi|92116164|ref|YP_575893.1| succinyl-CoA synthetase, alpha subunit [Nitrobacter hamburgensis X14] gi|91799058|gb|ABE61433.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nitrobacter hamburgensis X14] Length = 294 Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust. Identities = 211/299 (70%), Positives = 249/299 (83%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+NT+V+ QG TGK GTFH+E AI Y T++VGG P KG ++++PVF Sbjct: 1 MSILIDRNTRVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGNK----HLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A+E T A+ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRV+ L S Sbjct: 56 TVRDAREATGADASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVRRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ G+VGI+SRSGTLTYEAVFQTSQEGLGQ+TA Sbjct: 116 KSRLIGPNCPGVVTAGECKIGIMPANIFKPGNVGIVSRSGTLTYEAVFQTSQEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFID+LE+FLAD T SIVM+GEIGGSAEE+AAQFL DEA+RGR KP+V Sbjct: 176 VGIGGDPVKGTEFIDILEMFLADPKTNSIVMIGEIGGSAEEDAAQFLIDEARRGRSKPVV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++LVE L S Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAASKTAAMEAAGITVSPSPARLGKTLVEKLKS 294 >gi|149201197|ref|ZP_01878172.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. TM1035] gi|149202192|ref|ZP_01879165.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. TM1035] gi|149144290|gb|EDM32321.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. TM1035] gi|149145530|gb|EDM33556.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. TM1035] Length = 293 Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust. Identities = 209/298 (70%), Positives = 251/298 (84%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVDK+T+V+ QGLTG GTFH+EQAI Y TQ+VGG+ P KG T ++++PVF Sbjct: 1 MAVLVDKHTRVICQGLTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM+RVK LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TPD+CKIGIMPG I R+GSVG++SRSGTLTYEAV QTS GLGQST Sbjct: 116 KSRLIGPNCPGIITPDACKIGIMPGHIHRRGSVGVVSRSGTLTYEAVKQTSDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ T+SI+M+GEIGGSAEEEAAQFLKDEAKRGRKKP+ Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETQSIIMIGEIGGSAEEEAAQFLKDEAKRGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMK AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEAMKSAGITVAESPAGLGEAVLKAIG 293 >gi|85704794|ref|ZP_01035895.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. 217] gi|85670612|gb|EAQ25472.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. 217] Length = 293 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 209/298 (70%), Positives = 250/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVDK+T+V+ QGLTG GTFH+EQAI Y TQ+VGG+ P KG T ++++PVF Sbjct: 1 MAVLVDKHTRVICQGLTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM+RVK LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TPD+CKIGIMPG I R+GSVG++SRSGTLTYEAV QTS GLGQST Sbjct: 116 KSRLIGPNCPGIITPDACKIGIMPGHIHRRGSVGVVSRSGTLTYEAVKQTSDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ T+SI+M+GEIGGSAEEEAAQFLKDEAKRGRKKP+ Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETQSIIMIGEIGGSAEEEAAQFLKDEAKRGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMK AGI +A SPA +G +++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEAMKSAGITVAESPAGLGEAVLTAIG 293 >gi|75674619|ref|YP_317040.1| succinyl-CoA ligase, alpha subunit [Nitrobacter winogradskyi Nb-255] gi|74419489|gb|ABA03688.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nitrobacter winogradskyi Nb-255] Length = 294 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 210/297 (70%), Positives = 248/297 (83%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M IL+D+NT+V+ QG TGK GTFH+E AI Y T++VGG P KG ++++PVF Sbjct: 1 MPILIDRNTRVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGQT----HLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+E T A+ASVIYVPP+GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVREAREATGADASVIYVPPAGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRSLTGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ G+VGI+SRSGTLTYEAVFQTSQEGLGQ+TA Sbjct: 116 KSRLIGPNCPGVVTAGECKIGIMPANIFKPGNVGIVSRSGTLTYEAVFQTSQEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFID+LE+FLAD T +IVM+GEIGGSAEE+AAQFL DEA+RGR KP+V Sbjct: 176 VGIGGDPVKGTEFIDMLEMFLADPNTSAIVMIGEIGGSAEEDAAQFLIDEARRGRNKPVV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++LVE L Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAASKTAAMEAAGIAVSPSPARLGKTLVEKL 292 >gi|56695261|ref|YP_165609.1| succinyl-CoA synthase, alpha subunit [Ruegeria pomeroyi DSS-3] gi|56676998|gb|AAV93664.1| succinyl-CoA synthase, alpha subunit [Ruegeria pomeroyi DSS-3] Length = 294 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 205/298 (68%), Positives = 251/298 (84%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGMEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANA+VIYVPP A D+I+E+I+A++ +IVCITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKHVTEANATVIYVPPPFAADSILEAIDAQMEVIVCITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQSTA Sbjct: 116 SSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDIGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TESI+M+GEIGGSAEEEAAQFLKDEAK+GRKKP+ Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLKDEAKKGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AM+ AGI +A SPA +G +++E +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMRSAGIVVADSPATLGEAVLEAIG 293 >gi|254512671|ref|ZP_05124737.1| succinyl-CoA synthetase alpha subunit protein [Rhodobacteraceae bacterium KLH11] gi|221532670|gb|EEE35665.1| succinyl-CoA synthetase alpha subunit protein [Rhodobacteraceae bacterium KLH11] Length = 299 Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust. Identities = 206/299 (68%), Positives = 256/299 (85%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-GGNVNVPVF 59 MSIL++++TK++VQGLTGK GTFHTEQA+ Y TQ+V G+HPKKG WT G ++P++ Sbjct: 1 MSILLNRDTKIIVQGLTGKTGTFHTEQALAYSNTQMVAGVHPKKGGESWTSAGGQSLPIY 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EAKE T A ASV+YVPP+GA AI E+I+AEI LI CITEG+PV DMVRV +L Sbjct: 61 ASVGEAKEATGATASVVYVPPAGAAAAIEEAIDAEIELISCITEGVPVQDMVRVAEKLRN 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPN PG++T D CKIGIMPGSIF+KGSVG++SRSGTLTYEAV+QT+ GLGQ++ Sbjct: 121 SKSRLVGPNSPGMMTADECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVYQTTVAGLGQTS 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEF+DVLELFLAD+ T+SI+M+GEIGGSAEEEAAQFL DEAK+GR KP+ Sbjct: 181 AIGIGGDPVKGTEFVDVLELFLADDDTKSIIMIGEIGGSAEEEAAQFLADEAKKGRSKPV 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++ SPA +G+++++ +G Sbjct: 241 AGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIEAMRSAGIVVSDSPAGLGQAMLKAIG 299 >gi|300024732|ref|YP_003757343.1| succinyl-CoA synthetase, subunit alpha [Hyphomicrobium denitrificans ATCC 51888] gi|299526553|gb|ADJ25022.1| succinyl-CoA synthetase, alpha subunit [Hyphomicrobium denitrificans ATCC 51888] Length = 299 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 206/298 (69%), Positives = 251/298 (84%), Gaps = 2/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV-NVPVF 59 MSILVDK TKV+ QG+TG GTFHT+QA Y T++VGG+ P KG + + +VP+F Sbjct: 1 MSILVDKATKVICQGITGSQGTFHTKQARAY-GTKIVGGVTPGKGGSKHPDAELADVPLF 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAEA RT A AS IYVPP A DAI+E+I+AE+PLIVCITEGIPV+DMVRVK L+ Sbjct: 60 DSVAEAVARTGATASSIYVPPPFAADAILEAIDAEVPLIVCITEGIPVMDMVRVKRALDG 119 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTPD CKIGIMPG+IF+ GSVGI+SRSGTLTYEAV QT+ GLGQ+T Sbjct: 120 SKSRLVGPNCPGILTPDQCKIGIMPGNIFKHGSVGIVSRSGTLTYEAVKQTTDVGLGQTT 179 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVL+LFL+D+ T+SI+M+GEIGGSAEE+A++FL EA++GRKKP+ Sbjct: 180 AVGIGGDPVKGTEFIDVLDLFLSDDETQSIIMIGEIGGSAEEDASEFLTREARKGRKKPM 239 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPGR MGHAGA+ISGGKG AEDK+ AM+ AGI I+PSPA +GR+L+++L Sbjct: 240 AGFIAGVTAPPGRRMGHAGAIISGGKGKAEDKLAAMQAAGIAISPSPAALGRTLIDIL 297 >gi|114769290|ref|ZP_01446916.1| succinyl-CoA synthetase alpha subunit [alpha proteobacterium HTCC2255] gi|114550207|gb|EAU53088.1| succinyl-CoA synthetase alpha subunit [alpha proteobacterium HTCC2255] Length = 299 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 209/299 (69%), Positives = 253/299 (84%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSIL++K TK+LVQGLTGK GTFHTEQA+ Y T++VGG HPKKG T W N +P+F Sbjct: 1 MSILINKETKILVQGLTGKTGTFHTEQALSYFDTKMVGGTHPKKGGTNWKSTNGKELPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V E ++ T A ASVIYVPP+GA AI E+I+A I LI CITEGIPV+DMVRVK +LE Sbjct: 61 ASVEEGRDATGATASVIYVPPAGAAAAIEEAIDAGINLITCITEGIPVMDMVRVKNKLEN 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S+SRLIG NCPG++TP+ CKIGIMPGSIF+KGSVG+LSRSGTLTYEAVFQT+ GLGQS+ Sbjct: 121 SNSRLIGGNCPGLMTPNECKIGIMPGSIFKKGSVGVLSRSGTLTYEAVFQTTNAGLGQSS 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDP+KGTEFID+LELFLAD+ T+SI+M+GEIGGSAEEEAAQFL DEAK+GRKKPI Sbjct: 181 AVGIGGDPIKGTEFIDILELFLADKETQSIIMIGEIGGSAEEEAAQFLIDEAKKGRKKPI 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAPPGR MGHAGA+++GGKG A KI AM++AGI +A SPA +G ++++ +G Sbjct: 241 AGFIAGVTAPPGRRMGHAGAIVAGGKGDAGSKIEAMRQAGIVVADSPAGLGEAVLKAIG 299 >gi|84684236|ref|ZP_01012138.1| succinyl-CoA synthase, alpha subunit [Maritimibacter alkaliphilus HTCC2654] gi|84667989|gb|EAQ14457.1| succinyl-CoA synthase, alpha subunit [Rhodobacterales bacterium HTCC2654] Length = 295 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 202/297 (68%), Positives = 252/297 (84%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG ++++PVF Sbjct: 1 MAVLVDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK +T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPV+DM++VK LE S Sbjct: 56 SVHEAKHKTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVMDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SS LIGPNCPG++TPD+CKIGIMPG I ++G+VG++SRSGTLTYEAV QT+ GLGQS+ Sbjct: 116 SSILIGPNCPGVITPDACKIGIMPGHIHKRGTVGVVSRSGTLTYEAVKQTTDVGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TESI+M+GEIGGSAEEEAAQFLKDEAK+GRKKP+ Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLKDEAKKGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AMK AGI +A SPA++G +++E + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIVVAESPAQLGEAVLEAI 292 >gi|90421716|ref|YP_530086.1| succinyl-CoA synthetase, alpha subunit [Rhodopseudomonas palustris BisB18] gi|90103730|gb|ABD85767.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodopseudomonas palustris BisB18] Length = 294 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 210/299 (70%), Positives = 245/299 (81%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+D NTKV+ QG TGK GTFH+E A+ Y T++VGG P KG + G +PVF Sbjct: 1 MSVLIDSNTKVICQGFTGKNGTFHSEAAMAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T A+ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRV+ L S Sbjct: 56 TVREAVDKTGADASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVRRSLIGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT++EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVMTAGECKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTREGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD T SI+M+GEIGGSAEE+AAQFL DEAKRGR KP V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADPKTTSIIMIGEIGGSAEEDAAQFLIDEAKRGRSKPTV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++L E L S Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAASKTAAMEAAGIAVSPSPARLGKTLAEKLKS 294 >gi|182680504|ref|YP_001834650.1| succinyl-CoA synthetase, alpha subunit [Beijerinckia indica subsp. indica ATCC 9039] gi|182636387|gb|ACB97161.1| succinyl-CoA synthetase, alpha subunit [Beijerinckia indica subsp. indica ATCC 9039] Length = 294 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 206/297 (69%), Positives = 248/297 (83%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DK T V+ QG TG+ GTFH+EQA+ + T+++GG+ P KG G +PVF Sbjct: 1 MAILIDKETGVICQGFTGRNGTFHSEQALAF-GTRMLGGVAPGKGGRTHLG----LPVFE 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +AK+ T ASVIYVPP GA DAI+E+I+AEIPLI+CITEGIPVLDMV+VK L S Sbjct: 56 TVLQAKQATGCEASVIYVPPPGAADAILEAIDAEIPLIICITEGIPVLDMVKVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+T + KIGIMP +IF GSVGI+SRSGTLTYEAVFQT++EGLGQ+TA Sbjct: 116 KSRLIGPNCPGIVTAGASKIGIMPANIFSVGSVGIVSRSGTLTYEAVFQTTREGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKG++FID+LELFLADE T SIVM+GEIGGS EE+AAQFL DEA+RGRKKP+V Sbjct: 176 VGIGGDPVKGSDFIDILELFLADEKTHSIVMIGEIGGSGEEDAAQFLADEARRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISGGKG AEDK+ AM+ AGI ++PSPARIG +L EL+ Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGAAEDKVAAMEAAGIKVSPSPARIGHTLAELV 292 >gi|260431532|ref|ZP_05785503.1| succinyl-CoA ligase, alpha subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260415360|gb|EEX08619.1| succinyl-CoA ligase, alpha subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 294 Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust. Identities = 202/298 (67%), Positives = 249/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGMTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANA+VIYVPP A D+I+E+I+AE+ +IVCITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKHVTEANATVIYVPPPFAADSILEAIDAEMEVIVCITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TESI+M+GEIGGSAEEEAAQFL DEAK+GRKKP+ Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLADEAKKGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AM+ AGI +A SPA++G +++E +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMRSAGIVVAESPAKLGEAVLEAIG 293 >gi|83950441|ref|ZP_00959174.1| succinyl-CoA synthase, alpha subunit [Roseovarius nubinhibens ISM] gi|83838340|gb|EAP77636.1| succinyl-CoA synthase, alpha subunit [Roseovarius nubinhibens ISM] Length = 293 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 204/298 (68%), Positives = 249/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVDKNTKV+ QGLTG GTFH+EQAI Y TQ+VGG+ P KG ++++PVF Sbjct: 1 MAVLVDKNTKVICQGLTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGQT----HLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA +RT+A+ASVIYVPP A D+I+E+I+A++PLIVCITEGIPVLDM+RVK LE S Sbjct: 56 SVHEAMDRTSADASVIYVPPPFAADSILEAIDAQMPLIVCITEGIPVLDMMRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPGI+TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSTLIGPNCPGIITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TESI+M+GEIGGSAEEEAAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGA+DKI AMK AGI +A SPA +G +++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGADDKIEAMKSAGIVVAESPAGLGEAVLAAIG 293 >gi|89068135|ref|ZP_01155552.1| succinyl-CoA synthase, alpha subunit [Oceanicola granulosus HTCC2516] gi|89046374|gb|EAR52431.1| succinyl-CoA synthase, alpha subunit [Oceanicola granulosus HTCC2516] Length = 293 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 202/298 (67%), Positives = 250/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+ TKV+ QGLTG GTFH+EQAI Y T++VGG+ P KG ++++PVF Sbjct: 1 MAVLIDETTKVICQGLTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+ T ANASVIYVPP A D+I+E+I+A++ LIVCITEGIPVLDM+RVK LE S Sbjct: 56 SVHEARAATEANASVIYVPPPFAADSILEAIDAQMELIVCITEGIPVLDMMRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +S LIGPNCPG++TPD+CKIGIMPG I ++G+VG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 ASVLIGPNCPGVITPDACKIGIMPGHIHKRGTVGVVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TESI+M+GEIGGSAEEEAAQFLKDEAKRGR KP+ Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLKDEAKRGRTKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AMK AGI +A SPA +G +++E +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIVVADSPATLGEAVLEAIG 293 >gi|254420122|ref|ZP_05033846.1| succinyl-CoA synthetase, alpha subunit subfamily [Brevundimonas sp. BAL3] gi|196186299|gb|EDX81275.1| succinyl-CoA synthetase, alpha subunit subfamily [Brevundimonas sp. BAL3] Length = 300 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 221/298 (74%), Positives = 259/298 (86%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TK++VQGLTGK G FHTEQA+ Y T++V G+HP KG T WTG + +P++ Sbjct: 1 MSILVNKDTKIIVQGLTGKTGGFHTEQALAYHGTKMVAGVHPTKGGTNWTGSHGETLPIY 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAEAK+ T A+ASVIYVPPSGA AIIE+I+AEIP I CITEGIPVLDMV VK RLE Sbjct: 61 ASVAEAKDATGADASVIYVPPSGAAAAIIEAIDAEIPFITCITEGIPVLDMVNVKRRLEG 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTPD CKIGIMPG+IF+KGSVGI+SRSGTLTYEAVFQT+ EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPDECKIGIMPGNIFKKGSVGIVSRSGTLTYEAVFQTTNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLELFLAD T SI+M+GEIGG AEE+AAQFL DEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLELFLADPETTSIIMIGEIGGGAEEDAAQFLIDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++ SPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMEAAGIRMSESPARLGKTLVEVL 298 >gi|23009909|ref|ZP_00050783.1| COG0074: Succinyl-CoA synthetase, alpha subunit [Magnetospirillum magnetotacticum MS-1] Length = 301 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 212/288 (73%), Positives = 242/288 (84%), Gaps = 6/288 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D +TKV+ QG TGK GTFH+EQAI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDASTKVICQGFTGKNGTFHSEQAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E T A+ASV+YVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK LE S Sbjct: 56 TVAEAREATGADASVVYVPPPGAADAICEAIQAEIPLIVCITEGIPVLDMVRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPG++T KIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+ EGLGQ+TA Sbjct: 116 KSRLVGPNCPGVVTAGESKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTVEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFI +LELFLADE T+SIVM+GEIGGSAEEEAAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFISMLELFLADEKTQSIVMIGEIGGSAEEEAAQFLADEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ A +A PAR Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAASGLA-VPAR 282 >gi|254461601|ref|ZP_05075017.1| succinyl-CoA synthase, alpha subunit [Rhodobacterales bacterium HTCC2083] gi|206678190|gb|EDZ42677.1| succinyl-CoA synthase, alpha subunit [Rhodobacteraceae bacterium HTCC2083] Length = 293 Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust. Identities = 201/298 (67%), Positives = 249/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD+NTKV+ QGLTG GTFH+EQAI Y T++VGG+ P KG T ++++PVF Sbjct: 1 MAVLVDENTKVICQGLTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+ T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM+RV+ LE S Sbjct: 56 SVHEARHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMRVQRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPG++TPD+CKIGIMPG I ++GS G++SRSGTLTYEAV QT+ GLGQS+A Sbjct: 116 SSRLIGPNCPGVITPDACKIGIMPGHIHKRGSCGVVSRSGTLTYEAVKQTTDLGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE+FL D T+SI+M+GEIGGSAEEEAAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEMFLGDPETQSIIMIGEIGGSAEEEAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AM+ AGI +A SPA +G +++E +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMRSAGIVVADSPATLGEAVIEAIG 293 >gi|296282622|ref|ZP_06860620.1| succinyl-CoA synthetase, alpha subunit [Citromicrobium bathyomarinum JL354] Length = 296 Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust. Identities = 206/297 (69%), Positives = 243/297 (81%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+ QG+TG GTFHT+QA+ Y TQ+V G+ P KG T ++ +P F Sbjct: 1 MSILVNKDTKVITQGMTGNTGTFHTQQALDY-GTQMVAGVTPGKGGT----DHIGLPQFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAKE T A AS IYVPP A DAI E+I+AEI LIVCITEGIPVLDMVR KA LE S Sbjct: 56 TVKEAKEATGATASCIYVPPPFAADAICEAIDAEIELIVCITEGIPVLDMVRAKAALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAV QT+ GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPNECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVHQTTNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+LFL D TES++M+GEIGGSAEEEAAQFL ++ K+GR KP V Sbjct: 176 VGIGGDPVNGTNFIDVLDLFLDDPETESMIMIGEIGGSAEEEAAQFLAEQKKKGRWKPTV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGG+GGAEDKI AM+ AGI +A SP+ +G +L LL Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGQGGAEDKIAAMEAAGIRVAQSPSELGTTLAALL 292 >gi|254467250|ref|ZP_05080661.1| succinyl-CoA synthase, alpha subunit [Rhodobacterales bacterium Y4I] gi|206688158|gb|EDZ48640.1| succinyl-CoA synthase, alpha subunit [Rhodobacterales bacterium Y4I] Length = 294 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 201/298 (67%), Positives = 248/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG ++N+PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANA+VIYVPP A D+I+E+I+AE+ +IV ITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKHVTEANATVIYVPPPFAADSILEAIDAEMEVIVAITEGIPVLDMMKVKRALENS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++TPD+CKIGIMPG I R+GSVG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSTLIGPNCPGVITPDACKIGIMPGHIHRRGSVGVVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TESI+M+GEIGGSAEEEAAQFLKDEAK+GR KP+ Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLKDEAKKGRSKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AMK AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIVVAESPAGLGEAVLKAIG 293 >gi|84500190|ref|ZP_00998456.1| Succinyl-CoA synthetase, alpha subunit [Oceanicola batsensis HTCC2597] gi|84392124|gb|EAQ04392.1| Succinyl-CoA synthetase, alpha subunit [Oceanicola batsensis HTCC2597] Length = 294 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 200/297 (67%), Positives = 250/297 (84%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG + ++++PVF Sbjct: 1 MAVLVDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGST----HLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA ++T ANASVIYVPP A D+I+E+I+AEIPLIVCITEGIPVLDM++VKA L+ S Sbjct: 56 SVHEAVDQTGANASVIYVPPPFAADSILEAIDAEIPLIVCITEGIPVLDMMKVKAALKNS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQS+A Sbjct: 116 PCTLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDAGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE+FLAD+ TESI+M+GEIGGSAEEEAAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEMFLADDETESIIMIGEIGGSAEEEAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+++GGKGGA+DKI AMK AGI +A SPA +G ++++ + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGADDKIEAMKSAGIVVADSPAGLGEAVLKAI 292 >gi|197103625|ref|YP_002129002.1| succinyl-CoA synthetase alpha-subunit [Phenylobacterium zucineum HLK1] gi|196477045|gb|ACG76573.1| succinyl-CoA synthetase alpha-subunit [Phenylobacterium zucineum HLK1] Length = 292 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 205/297 (69%), Positives = 250/297 (84%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ K+T+V+ QG+TG GTFHTEQAI Y T++VGG+ P KG +V +PVF Sbjct: 1 MSILIGKDTRVICQGITGSQGTFHTEQAIAY-GTKMVGGVTPGKGGQT----HVGLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + T A ASVIYVPP A D+I+E+I+AE+PLIVCITEGIPV DM++VK L S Sbjct: 56 TVAEAVKETGAEASVIYVPPPFAADSILEAIDAEVPLIVCITEGIPVTDMIKVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP CKIGIMPG+IF++GSVG++SRSGTLTYEAVFQT+Q GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPGECKIGIMPGNIFKRGSVGVVSRSGTLTYEAVFQTTQVGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVL++FL D TESI+M+GEIGGSAEE+AA+F+K+ A KKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLDMFLKDPETESIIMIGEIGGSAEEDAAEFIKNSA---IKKPMV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPA++G +LVE+L Sbjct: 233 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPAKLGETLVEVL 289 >gi|218677907|ref|ZP_03525804.1| succinyl-CoA synthetase subunit alpha [Rhizobium etli CIAT 894] Length = 247 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 196/247 (79%), Positives = 224/247 (90%), Gaps = 1/247 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TK+LVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVNKDTKILVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGENWTGAKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KE+T ANASVIYVPP+GA DAIIE+I+AEIP I CITEGIPV+DMVRVKARL++ Sbjct: 61 ATVAEGKEKTGANASVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGI+TP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGIMTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLADEAT SI+M+GEIGGSAEE+AAQFL DEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADEATTSIIMIGEIGGSAEEDAAQFLIDEAKKGRKKPM 240 Query: 240 VGFVAGK 246 GF+AG+ Sbjct: 241 AGFIAGR 247 >gi|77464546|ref|YP_354050.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodobacter sphaeroides 2.4.1] gi|126463386|ref|YP_001044500.1| succinyl-CoA synthetase, alpha subunit [Rhodobacter sphaeroides ATCC 17029] gi|221640457|ref|YP_002526719.1| 2-oxoglutarate dehydrogenase E1 component [Rhodobacter sphaeroides KD131] gi|332559439|ref|ZP_08413761.1| succinyl-CoA synthetase, alpha subunit [Rhodobacter sphaeroides WS8N] gi|77388964|gb|ABA80149.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodobacter sphaeroides 2.4.1] gi|126105050|gb|ABN77728.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodobacter sphaeroides ATCC 17029] gi|221161238|gb|ACM02218.1| 2-oxoglutarate dehydrogenase E1 component [Rhodobacter sphaeroides KD131] gi|332277151|gb|EGJ22466.1| succinyl-CoA synthetase, alpha subunit [Rhodobacter sphaeroides WS8N] Length = 294 Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust. Identities = 203/298 (68%), Positives = 247/298 (82%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV++NTKV+ QG+TG GTFHTEQAI Y T++VGG+ P KG + G +PVF Sbjct: 1 MAVLVNENTKVICQGITGSQGTFHTEQAIAY-GTKMVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+E T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++VK L+ S Sbjct: 56 SVYEAREVTGANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVKRALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPG++TP +CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQS+A Sbjct: 116 SSRLIGPNCPGVITPGACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDLGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE+FLAD T+SI+M+GEIGGSAEEEAAQFL DE KRGR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEMFLADPETQSIIMIGEIGGSAEEEAAQFLADEKKRGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA++SGGKG AE KI AMK AGI +A SPA +G ++++ LG Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGDAESKIEAMKSAGIVVADSPAHLGEAVMQALG 293 >gi|89053318|ref|YP_508769.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Jannaschia sp. CCS1] gi|88862867|gb|ABD53744.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Jannaschia sp. CCS1] Length = 293 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 200/298 (67%), Positives = 246/298 (82%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD+NTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG ++++PVF Sbjct: 1 MAVLVDENTKVICQGFTGSQGTFHSEQAIEY-GTQMVGGVTPGKGGMT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+ T ANASVIYVPP A D+I+E+I+AE+ LI+CITEGIPVLDM+RVK LE S Sbjct: 56 SVHEARHVTDANASVIYVPPPFAADSILEAIDAEMELIICITEGIPVLDMMRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SS L+GPNCPG++TPD+CKIGIMPG I ++GS G++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 SSILVGPNCPGVITPDACKIGIMPGHIHKRGSCGVVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TESI+M+GEIGGSAEEEAAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AMK AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIVVADSPATLGEAVLQAIG 293 >gi|159045422|ref|YP_001534216.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Dinoroseobacter shibae DFL 12] gi|157913182|gb|ABV94615.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Dinoroseobacter shibae DFL 12] Length = 293 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 199/298 (66%), Positives = 248/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG ++N+PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANA+VIYVPP A D+I+E+I+AE+ +IVCITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKAVTEANATVIYVPPPFAADSILEAIDAEMEVIVCITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPG++TPD+CKIGIMPG I ++G+VG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 ASRLIGPNCPGVITPDACKIGIMPGHIHKRGTVGVVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TESI+M+GEIGGSAEEEAAQFL DE KRGR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLADEKKRGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AM+ AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMQSAGIVVAESPAGLGEAVLKAIG 293 >gi|84515873|ref|ZP_01003234.1| Succinyl-CoA synthetase, alpha subunit [Loktanella vestfoldensis SKA53] gi|84510315|gb|EAQ06771.1| Succinyl-CoA synthetase, alpha subunit [Loktanella vestfoldensis SKA53] Length = 293 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 198/298 (66%), Positives = 248/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV++NT+V+ QGLTG GTFH+EQAI Y T++VGG+ P KG + ++++PVF Sbjct: 1 MAILVNENTRVICQGLTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGST----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+ T ANASVIYVPP A D+I+E+I+AE+ LI+CITEGIPVLDM++VK LE S Sbjct: 56 SVHEARHVTQANASVIYVPPPFAADSILEAIDAEMELIICITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I R+GSVG++SRSGTLTYEAV QTS GLGQSTA Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHRRGSVGVVSRSGTLTYEAVKQTSDSGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KG+E ID+LE+FLAD+ T SI+M+GEIGGSAEEEAAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGSEHIDILEMFLADDETHSIIMIGEIGGSAEEEAAQFLADERKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMK AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEAMKSAGIIVADSPATLGEAVLKAIG 293 >gi|254510907|ref|ZP_05122974.1| succinyl-CoA synthase, alpha subunit [Rhodobacteraceae bacterium KLH11] gi|221534618|gb|EEE37606.1| succinyl-CoA synthase, alpha subunit [Rhodobacteraceae bacterium KLH11] Length = 293 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 198/298 (66%), Positives = 248/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T +VGG+ P KG ++++PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGME----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+A + +IVCITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKAVTEANASVIYVPPPFAADSILEAIDARMEVIVCITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRL+GPNCPG++TP +CKIGIMPG I ++GSVG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 NSRLVGPNCPGVITPGACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ T SI+M+GEIGGSAEEEAAQFL DEAK+GRKKP+ Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETTSIIMIGEIGGSAEEEAAQFLADEAKKGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AM+ AGI +A SPA++G +++E +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMRAAGIVVAESPAQLGEAVLEAIG 293 >gi|163734165|ref|ZP_02141606.1| succinyl-CoA synthase, alpha subunit [Roseobacter litoralis Och 149] gi|161392701|gb|EDQ17029.1| succinyl-CoA synthase, alpha subunit [Roseobacter litoralis Och 149] Length = 295 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 198/297 (66%), Positives = 247/297 (83%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QGLTG GTFH+EQAI Y T++VGG+ P KG ++++PVF Sbjct: 1 MAVLIDENTKVICQGLTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++V+ LE S Sbjct: 56 SVHEAKHATEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVQRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++GS G++SRSGTLTYEAV QT+ GLGQSTA Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGSCGVVSRSGTLTYEAVKQTTDLGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE+FLAD T+SI+M+GEIGGSAEE+AAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEMFLADPETQSIIMIGEIGGSAEEDAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI+AM+ AGI +A SPA +G ++ E + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIDAMRAAGIVVADSPATLGEAVQEAI 292 >gi|85709013|ref|ZP_01040079.1| succinyl-CoA synthetase, alpha subunit [Erythrobacter sp. NAP1] gi|85690547|gb|EAQ30550.1| succinyl-CoA synthetase, alpha subunit [Erythrobacter sp. NAP1] Length = 296 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 202/297 (68%), Positives = 244/297 (82%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+ QG+TG GTFHT+QA+ Y T++V G+ P KG T G +P F Sbjct: 1 MSILVNKDTKVITQGMTGNTGTFHTQQALDY-GTKMVAGVTPGKGGTEHIG----LPQFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAKE T A AS IYVPP A DAI E+I+AE+ LI+CITEGIPVLDMVR KA L S Sbjct: 56 TVREAKEATGATASCIYVPPPFAADAICEAIDAEMELIICITEGIPVLDMVRAKAALTGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAV QT+Q GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPEECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVHQTTQVGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+LFL D T+SI+M+GEIGGSAEEEAA+F+K EA +GR KP V Sbjct: 176 VGIGGDPVNGTNFIDVLDLFLDDPETKSIIMIGEIGGSAEEEAAEFIKQEAAKGRSKPTV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGG+GGA+DKI AM++AGI ++PSP+ +G +L +L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGQGGADDKIAAMEDAGIRVSPSPSELGTTLDAML 292 >gi|302381584|ref|YP_003817407.1| succinyl-CoA synthetase, subunit alpha [Brevundimonas subvibrioides ATCC 15264] gi|302192212|gb|ADK99783.1| succinyl-CoA synthetase, alpha subunit [Brevundimonas subvibrioides ATCC 15264] Length = 300 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 223/298 (74%), Positives = 261/298 (87%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILVDKNTK++VQGLTGK G FHTEQA+ Y TQ+V G+HP KG T WTG + ++P++ Sbjct: 1 MSILVDKNTKIIVQGLTGKTGGFHTEQALAYHGTQMVAGVHPTKGGTNWTGSHGESLPIY 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAEAKE T A+ASVIYVPP+GA AIIE+I+AEIP I CITEGIPVLDMV+VK LE Sbjct: 61 ASVAEAKEATGADASVIYVPPAGAAAAIIEAIDAEIPFITCITEGIPVLDMVKVKRHLEG 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPG+LTPD CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQT+ EGLGQ+T Sbjct: 121 SKSRLLGPNCPGVLTPDECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTTNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD T SI+M+GEIGG AEEEAAQFL DEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADPETTSIIMIGEIGGGAEEEAAQFLIDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMEAAGITMSPSPARLGKTLVEVL 298 >gi|163744280|ref|ZP_02151640.1| succinyl-CoA synthase, alpha subunit [Oceanibulbus indolifex HEL-45] gi|161381098|gb|EDQ05507.1| succinyl-CoA synthase, alpha subunit [Oceanibulbus indolifex HEL-45] Length = 295 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 201/297 (67%), Positives = 244/297 (82%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV++NTKV+ QGLTG GTFHTEQAI Y T++VGG+ P KG ++++PVF Sbjct: 1 MAVLVNENTKVICQGLTGSQGTFHTEQAIAY-GTKMVGGVTPGKGGQT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM RV L+ S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMARVARALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I R+GSVG++SRSGTLTYEAV QT+ GLGQS+A Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHRRGSVGVVSRSGTLTYEAVKQTTDMGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE+FLAD T+SI+M+GEIGGSAEEEAAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEMFLADPETQSIIMIGEIGGSAEEEAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMKEAGI +A SPA +G ++ E + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEAMKEAGIVVADSPATLGEAVKEAI 292 >gi|255261782|ref|ZP_05341124.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Thalassiobium sp. R2A62] gi|255104117|gb|EET46791.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Thalassiobium sp. R2A62] Length = 293 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 198/298 (66%), Positives = 246/298 (82%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG ++++PVF Sbjct: 1 MAILIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 + EA E T ANA+VIYVPP A D+I+E+++AEIP I CITEGIPVLDM++VK LE S Sbjct: 56 SCHEAVETTGANATVIYVPPPFAADSILEALDAEIPFICCITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SS LIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QT+ GLGQSTA Sbjct: 116 SSILIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTTDSGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ T+SI+M+GEIGGSAEEEAAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLERFLADDETQSIIMIGEIGGSAEEEAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AM+ AG+ +A SPA +G +++E +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMRSAGVVVAESPAGLGEAVLEAIG 293 >gi|110678917|ref|YP_681924.1| succinyl-CoA synthase, alpha subunit [Roseobacter denitrificans OCh 114] gi|109455033|gb|ABG31238.1| succinyl-CoA synthase, alpha subunit [Roseobacter denitrificans OCh 114] Length = 295 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 198/297 (66%), Positives = 246/297 (82%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QGLTG GTFH+EQAI Y T++VGG+ P KG ++++PVF Sbjct: 1 MAVLIDENTKVICQGLTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++V+ LE S Sbjct: 56 SVHEAKHATEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVQRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++GS G++SRSGTLTYEAV QT+ GLGQSTA Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGSCGVVSRSGTLTYEAVKQTTDLGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE+FLAD T SI+M+GEIGGSAEE+AAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEMFLADPETTSIIMIGEIGGSAEEDAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI+AM+ AGI +A SPA +G ++ E + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIDAMRAAGIVVADSPATLGEAVQEAI 292 >gi|304321562|ref|YP_003855205.1| Succinyl-CoA synthetase subunit alpha [Parvularcula bermudensis HTCC2503] gi|303300464|gb|ADM10063.1| Succinyl-CoA synthetase alpha chain [Parvularcula bermudensis HTCC2503] Length = 299 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 207/301 (68%), Positives = 240/301 (79%), Gaps = 8/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV----NV 56 MSILVDKNTKV+ QGLTGK GTFHTE AI Y T++VGG+ P KG W G V + Sbjct: 1 MSILVDKNTKVICQGLTGKTGTFHTEHAIAY-GTKMVGGVTPGKGGQTWEAGEVASGATL 59 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF TV AKE T A+ASVIYVPP A +IIE+IEAEIPL++ ITEGIPVLDMV+VKA+ Sbjct: 60 PVFDTVQAAKEETGADASVIYVPPKFAAASIIEAIEAEIPLVITITEGIPVLDMVKVKAK 119 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 LE S +RL+GPNCPG++TPD CKIGIMPG I R+GSVGI+SRSGTLTYEAV QT+Q GLG Sbjct: 120 LEGSKTRLVGPNCPGVITPDECKIGIMPGHIHRRGSVGIVSRSGTLTYEAVHQTTQVGLG 179 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QST VGIGGDPVKG +FIDVLELFLAD+ T+ I+M+GEIGGSAE EAA FL A+ K Sbjct: 180 QSTCVGIGGDPVKGMDFIDVLELFLADDETQQIIMIGEIGGSAETEAAAFL---AESKVK 236 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP VGF+AG TAPPGR MGHAGA++SGG AE KI AMK AGI ++PSPA +G ++ EL Sbjct: 237 KPTVGFIAGVTAPPGRRMGHAGAIVSGGADTAEAKIEAMKAAGISVSPSPAGLGATMKEL 296 Query: 297 L 297 L Sbjct: 297 L 297 >gi|146276135|ref|YP_001166294.1| succinyl-CoA synthetase, alpha subunit [Rhodobacter sphaeroides ATCC 17025] gi|145554376|gb|ABP68989.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodobacter sphaeroides ATCC 17025] Length = 294 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 201/298 (67%), Positives = 245/298 (82%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV++NTKV+ QG+TG GTFHTEQAI Y T++VGG+ P KG + G +PVF Sbjct: 1 MAVLVNENTKVICQGITGSQGTFHTEQAIAY-GTKMVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA++ T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++VK LE S Sbjct: 56 SVFEARDVTGANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TP +CKIGIMPG I ++GSVG++SRSGTLTYEAV QT+ GLGQS+A Sbjct: 116 KSRLIGPNCPGVITPGACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTTDLGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE+FLAD T SI+M+GEIGGSAEEEAAQFL DE KRGR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEMFLADPETTSIIMIGEIGGSAEEEAAQFLADEKKRGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA++SGGKG AE KI AMK AGI +A SPA +G ++++ LG Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGDAESKIEAMKSAGIVVADSPAHLGEAVMQALG 293 >gi|83944437|ref|ZP_00956891.1| Succinyl-CoA synthetase, alpha subunit [Sulfitobacter sp. EE-36] gi|83844760|gb|EAP82643.1| Succinyl-CoA synthetase, alpha subunit [Sulfitobacter sp. EE-36] Length = 295 Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust. Identities = 197/297 (66%), Positives = 245/297 (82%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV++NTKV+ QGLTG GTFHTEQAI Y T++VGG+ P KG ++++PVF Sbjct: 1 MAVLVNENTKVICQGLTGSQGTFHTEQAIAY-GTKMVGGVTPGKGGQT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+ T ANA+VIYVPP A D+I+E+I+AE+ LI+CITEGIPVLDM+RVK LE S Sbjct: 56 SVHEARHVTEANATVIYVPPPFAADSILEAIDAEMELIICITEGIPVLDMMRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++G+ G++SRSGTLTYEAV QTS GLGQS+A Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGTCGVVSRSGTLTYEAVKQTSDLGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KG+E ID+LE+FLAD TESI+M+GEIGGSAEEEAAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGSEHIDILEMFLADPETESIIMIGEIGGSAEEEAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMKEAGI +A SPA +G ++ E + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIAAMKEAGIVVADSPATLGEAVQEAI 292 >gi|149913127|ref|ZP_01901661.1| dihydrolipoamide acetyltransferase [Roseobacter sp. AzwK-3b] gi|149813533|gb|EDM73359.1| dihydrolipoamide acetyltransferase [Roseobacter sp. AzwK-3b] Length = 294 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 196/294 (66%), Positives = 242/294 (82%), Gaps = 5/294 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QGLTG GTFHTEQAI Y T++VGG+ P KG ++++PVF Sbjct: 1 MAVLIDENTKVICQGLTGSQGTFHTEQAIAY-GTKMVGGVTPGKGGQT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ +IVCITEGIPVLDM+RVK LE S Sbjct: 56 SVHEAKHATDANASVIYVPPPFAADSILEAIDAEMEVIVCITEGIPVLDMMRVKRALETS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++G VG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGKVGVVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TE+I+M+GEIGGSAEE+AA FL E K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETEAIIMIGEIGGSAEEDAAAFLASERKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG+TAPPGR MGHAGA+++GGKGGA+DKI AMK AGI +A SPA +G +++ Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGADDKIEAMKSAGITVAESPASLGEAVL 289 >gi|83953478|ref|ZP_00962200.1| Succinyl-CoA synthetase, alpha subunit [Sulfitobacter sp. NAS-14.1] gi|83842446|gb|EAP81614.1| Succinyl-CoA synthetase, alpha subunit [Sulfitobacter sp. NAS-14.1] Length = 295 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 196/297 (65%), Positives = 245/297 (82%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV++NTKV+ QGLTG GTFHTEQAI Y T++VGG+ P KG ++++PVF Sbjct: 1 MAVLVNENTKVICQGLTGSQGTFHTEQAIAY-GTKMVGGVTPGKGGQT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+ T ANA+VIYVPP A D+I+E+I+AE+ LI+CITEGIPVLDM+RVK LE S Sbjct: 56 SVHEARHVTEANATVIYVPPPFAADSILEAIDAEMELIICITEGIPVLDMMRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++G+ G++SRSGTLTYEAV QTS GLGQS+A Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGTCGVVSRSGTLTYEAVKQTSDLGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KG+E ID+LE+FLAD T+SI+M+GEIGGSAEEEAAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGSEHIDILEMFLADPETQSIIMIGEIGGSAEEEAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMKEAGI +A SPA +G ++ E + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIAAMKEAGIVVADSPATLGEAVQEAI 292 >gi|241761111|ref|ZP_04759200.1| succinyl-CoA synthetase, alpha subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374730|gb|EER64191.1| succinyl-CoA synthetase, alpha subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 294 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 192/297 (64%), Positives = 246/297 (82%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL + TKV+ QG+TG+ G+ HT Q++ Y T++VGG+ P KG ++++P+F Sbjct: 1 MSILANATTKVITQGITGQQGSHHTAQSLAYG-TKMVGGVTPGKGGQT----HLDLPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEAK++T A+AS+I+VPP+ AGDAI+E+I+AEIPLIV +TEGIP+LDMVRVK L S Sbjct: 56 SVAEAKQKTGADASMIFVPPAFAGDAILEAIDAEIPLIVTVTEGIPILDMVRVKRALTGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPN PG+LTPDS +IGIMPG+IF+KGSVGI+SRSGTLTYEAVFQTSQ GLGQSTA Sbjct: 116 KSRLIGPNSPGLLTPDSARIGIMPGAIFKKGSVGIVSRSGTLTYEAVFQTSQLGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID+L++FL D+ATESI+M+GEIGGS EE AA+FLK++A++GRKKP+ Sbjct: 176 VGIGGDPVNGTNFIDILDMFLDDDATESIIMIGEIGGSDEENAAEFLKEQARKGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG +APPGR MGHAGA++SG G A KI AM+ AGI + P P++IG +L+ LL Sbjct: 236 GFIAGVSAPPGRHMGHAGAIVSGHSGSAAAKIEAMESAGIAMTPDPSKIGHTLLNLL 292 >gi|126734827|ref|ZP_01750573.1| succinyl-CoA synthetase, alpha subunit [Roseobacter sp. CCS2] gi|126715382|gb|EBA12247.1| succinyl-CoA synthetase, alpha subunit [Roseobacter sp. CCS2] Length = 293 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 194/298 (65%), Positives = 246/298 (82%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV++NT+V+ QGLTG GTFH+EQAI Y T++VGG+ P KG ++++P+F Sbjct: 1 MAILVNENTRVICQGLTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQT----HLDLPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA +T ANASVIYVPP A D+I+E+I+AE+ LI+CITEGIPVLDM+RVK LE S Sbjct: 56 SVHEAMAKTEANASVIYVPPPFAADSILEAIDAEMELIICITEGIPVLDMMRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQSTA Sbjct: 116 TSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDSGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVL++FL D+ T S++M+GEIGGSAEEEAA+FL + K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLDMFLDDDETHSMIMIGEIGGSAEEEAAEFLTAQKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMK AGI +A SPA +G +++E +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEAMKSAGIVVADSPATLGEAVLEAIG 293 >gi|260752925|ref|YP_003225818.1| succinyl-CoA synthetase, subunit alpha [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552288|gb|ACV75234.1| succinyl-CoA synthetase, alpha subunit [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 294 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 191/297 (64%), Positives = 245/297 (82%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL + TKV+ QG+TG+ G+ HT Q++ Y T++VGG+ P KG ++++P+F Sbjct: 1 MSILANATTKVITQGITGQQGSHHTAQSLAYG-TKMVGGVTPGKGGQT----HLDLPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEAK++T A+AS+I+VPP+ AGDAI+E+I+AEIPLIV +TEGIP+LDMVRVK L S Sbjct: 56 SVAEAKQKTGADASMIFVPPAFAGDAILEAIDAEIPLIVTVTEGIPILDMVRVKRALTGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPN PG+LTPDS +IGIMPG+IF+KGSVGI+SRSGTLTYEAVFQTSQ GLGQSTA Sbjct: 116 KSRLIGPNSPGLLTPDSARIGIMPGAIFKKGSVGIVSRSGTLTYEAVFQTSQLGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID+L++FL D+ TESI+M+GEIGGS EE AA+FLK++A++GRKKP+ Sbjct: 176 VGIGGDPVNGTNFIDILDMFLDDDETESIIMIGEIGGSDEENAAEFLKEQARKGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG +APPGR MGHAGA++SG G A KI AM+ AGI + P P++IG +L+ LL Sbjct: 236 GFIAGVSAPPGRHMGHAGAIVSGHSGSASAKIEAMQSAGIAMTPDPSKIGHTLLNLL 292 >gi|310814642|ref|YP_003962606.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ketogulonicigenium vulgare Y25] gi|308753377|gb|ADO41306.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ketogulonicigenium vulgare Y25] Length = 294 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 198/297 (66%), Positives = 242/297 (81%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+ T+V+ QG+TG GTFH++QA+ Y TQ+ GG+ P KG T G +PVF Sbjct: 1 MAILVNAQTRVICQGITGAQGTFHSQQALDY-GTQLAGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T ANA+ IYVPP A D+I+E+I+AE+PLIV ITEGIPVLDM+RVK L S Sbjct: 56 TVHEAIAKTGANATAIYVPPPFAADSILEAIDAEVPLIVAITEGIPVLDMMRVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP++CKIGIMPGSIF GSVG++SRSGTLTYEAV QT+ GLGQSTA Sbjct: 116 KSRLIGPNCPGVLTPNACKIGIMPGSIFSAGSVGVVSRSGTLTYEAVKQTTDVGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KG+E ID+LE+FLAD ATESI+M+GEIGG+AEEEAAQFLKDE RGR KP Sbjct: 176 VGIGGDPIKGSEHIDILEMFLADPATESIIMIGEIGGTAEEEAAQFLKDEKARGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGAVISGG G AE KI+AM+ AGI +A SPA +G+++++ + Sbjct: 236 GFIAGRTAPPGRRMGHAGAVISGGTGDAESKIDAMRSAGIVVADSPATLGQAVMQAI 292 >gi|283856281|ref|YP_162302.2| succinyl-CoA synthetase subunit alpha [Zymomonas mobilis subsp. mobilis ZM4] gi|283775277|gb|AAV89191.2| succinyl-CoA synthetase, alpha subunit [Zymomonas mobilis subsp. mobilis ZM4] Length = 294 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 191/297 (64%), Positives = 245/297 (82%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL + TKV+ QG+TG+ G+ HT Q++ Y T++VGG+ P KG ++++P+F Sbjct: 1 MSILANATTKVITQGITGQQGSHHTAQSLAYG-TKMVGGVTPGKGGQT----HLDLPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEAK++T A+AS+I+VPP+ AGDAI+E+I+AEIPLIV +TEGIP+LDMVRVK L S Sbjct: 56 SVAEAKQKTGADASMIFVPPAFAGDAILEAIDAEIPLIVTVTEGIPILDMVRVKRALTGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPN PG+LTPDS +IGIMPG+IF+KGSVGI+SRSGTLTYEAVFQTSQ GLGQSTA Sbjct: 116 KSRLIGPNSPGLLTPDSARIGIMPGAIFKKGSVGIVSRSGTLTYEAVFQTSQLGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID+L++FL D+ TESI+M+GEIGGS EE AA+FLK++A++GRKKP+ Sbjct: 176 VGIGGDPVNGTNFIDILDMFLDDDETESIIMIGEIGGSDEENAAEFLKEQARKGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG +APPGR MGHAGA++SG G A KI AM+ AGI + P P++IG +L+ LL Sbjct: 236 GFIAGVSAPPGRHMGHAGAIVSGHSGSAAAKIEAMQSAGIAMTPDPSKIGHTLLNLL 292 >gi|126730340|ref|ZP_01746151.1| succinyl-CoA synthetase, alpha subunit [Sagittula stellata E-37] gi|126709073|gb|EBA08128.1| succinyl-CoA synthetase, alpha subunit [Sagittula stellata E-37] Length = 295 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 194/297 (65%), Positives = 243/297 (81%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG ++++PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQT----HLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK +T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKAKTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVKRALENS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++TPD+CKIGIMPG I ++G VG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSTLIGPNCPGVITPDACKIGIMPGHIHKRGKVGVVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TE+I+M+GEIGGSAEE+AA FL E K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETEAIIMIGEIGGSAEEDAAAFLASEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+++GGKGGA+DKI AMK AGI +A SPA +G +++E + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGADDKIEAMKAAGIVVADSPATLGEAVLEAI 292 >gi|260576569|ref|ZP_05844557.1| succinyl-CoA synthetase, alpha subunit [Rhodobacter sp. SW2] gi|259021173|gb|EEW24481.1| succinyl-CoA synthetase, alpha subunit [Rhodobacter sp. SW2] Length = 294 Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust. Identities = 195/298 (65%), Positives = 243/298 (81%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+K T+V+ QG TG GTFH+EQAI Y T++VGG+ P KG + ++++PVF Sbjct: 1 MAVLVNKTTRVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGST----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+ T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++VK L+ + Sbjct: 56 SVHEARAVTGANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVKRALQGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD CKIGIMPG I R+GSVG++SRSGTLTYEAV QTS GLGQSTA Sbjct: 116 KSRLIGPNCPGVITPDECKIGIMPGHIHRRGSVGVVSRSGTLTYEAVKQTSDLGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KG+E ID+LELFLAD T SI+M+GEIGG+AEE+AAQFL DE KRGR KP Sbjct: 176 VGIGGDPIKGSEHIDILELFLADPETHSIIMIGEIGGAAEEDAAQFLADEKKRGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GR MGHAGA++SGGKG AE KI AMK AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPAGRRMGHAGAIVSGGKGDAESKIEAMKRAGIVVADSPAHLGEAVMQAIG 293 >gi|254449510|ref|ZP_05062947.1| succinyl-CoA ligase, alpha subunit [Octadecabacter antarcticus 238] gi|198263916|gb|EDY88186.1| succinyl-CoA ligase, alpha subunit [Octadecabacter antarcticus 238] Length = 293 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 192/298 (64%), Positives = 244/298 (81%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+D+NTKV+ QGLTG GTFH+EQAI Y T++VGG+ P KG ++++P+F Sbjct: 1 MAILIDENTKVICQGLTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQT----HLDLPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LI+CITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIICITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TP++CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQSTA Sbjct: 116 KSRLIGPNCPGVITPNACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDSGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE ID+L +FL D+ T S++M+GEIGGSAEEEAA+FL + K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDILNMFLDDDETHSMIMIGEIGGSAEEEAAEFLTAQKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMK AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEAMKSAGIIVADSPATLGEAVLKAIG 293 >gi|254440234|ref|ZP_05053728.1| succinyl-CoA synthetase, alpha subunit subfamily [Octadecabacter antarcticus 307] gi|198255680|gb|EDY79994.1| succinyl-CoA synthetase, alpha subunit subfamily [Octadecabacter antarcticus 307] Length = 293 Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust. Identities = 191/298 (64%), Positives = 244/298 (81%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+D+NTKV+ QGLTG GTFH+EQAI Y T++VGG+ P KG ++++P+F Sbjct: 1 MAILIDENTKVICQGLTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQT----HLDLPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA T ANASVIYVPP A D+I+E+I+AE+ LI+CITEGIPVLDM++VK LE S Sbjct: 56 SVHEAMHVTGANASVIYVPPPFAADSILEAIDAEMELIICITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TP++CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQSTA Sbjct: 116 KSRLIGPNCPGVITPNACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDSGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE ID+L +FL D+ T S++M+GEIGGSAEEEAA+FL + K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDILNMFLDDDETHSMIMIGEIGGSAEEEAAEFLTAQKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMK+AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEAMKKAGIIVADSPATLGEAVLKAIG 293 >gi|114764883|ref|ZP_01444065.1| Succinyl-CoA synthetase, alpha subunit [Pelagibaca bermudensis HTCC2601] gi|114542769|gb|EAU45792.1| Succinyl-CoA synthetase, alpha subunit [Roseovarius sp. HTCC2601] Length = 294 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 194/297 (65%), Positives = 241/297 (81%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MAVLVDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA +T ANASVIYVPP A D+I+E+I+AEI LI+CITEGIPVLDM++VK L S Sbjct: 56 SVHEAVHKTEANASVIYVPPPFAADSILEAIDAEIELIICITEGIPVLDMMKVKRALIDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++G VG++SRSGTLTYEAV QT+ GLGQS+A Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGKVGVVSRSGTLTYEAVKQTTDLGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVL++FL D TESI+M+GEIGGSAEEEAA+FLK++ K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLDMFLDDPETESIIMIGEIGGSAEEEAAEFLKEQKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMK AGI +A SPA +G ++V+ + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEAMKSAGIVVADSPATLGEAVVKAM 292 >gi|217978643|ref|YP_002362790.1| succinyl-CoA synthetase, alpha subunit [Methylocella silvestris BL2] gi|217504019|gb|ACK51428.1| succinyl-CoA synthetase, alpha subunit [Methylocella silvestris BL2] Length = 294 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 209/297 (70%), Positives = 246/297 (82%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ K+TK++ QG TGK GTFH+EQAI Y + +VGG P KG + G +PVF Sbjct: 1 MSILLKKDTKIICQGFTGKNGTFHSEQAIAY-GSLMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA++ T A ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPV DMVRVK L S Sbjct: 56 TVDEARDATGAEASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVEDMVRVKRALCGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++T KIGIMPG+IF+KGSVGI+SRSGTLTYEAVFQT++E LGQ+TA Sbjct: 116 KSTLIGPNCPGVMTAGESKIGIMPGNIFQKGSVGIVSRSGTLTYEAVFQTTRENLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKG EFID+L+LFLAD+ T+SI+M+GEIGG AEE+AAQFLKD AKRGR KP V Sbjct: 176 VGIGGDPVKGAEFIDILDLFLADDDTKSIIMIGEIGGGAEEDAAQFLKDAAKRGRMKPTV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPAR+G +L E+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMESAGIRVSPSPARLGATLAEVL 292 >gi|294676278|ref|YP_003576893.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Rhodobacter capsulatus SB 1003] gi|294475098|gb|ADE84486.1| succinyl-CoA synthetase (ADP-forming), alpha subunit [Rhodobacter capsulatus SB 1003] Length = 294 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 195/297 (65%), Positives = 242/297 (81%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+++TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG + G +PVF Sbjct: 1 MAVLVNEHTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T A+A+ IYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM+RVK L S Sbjct: 56 SVHEAKHVTGAHATAIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMRVKRALIDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPGSIF++GSVG++SRSGTLTYEAV QT+ GLGQS+A Sbjct: 116 KSRLIGPNCPGVMTPDACKIGIMPGSIFKRGSVGVVSRSGTLTYEAVKQTTDVGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE+FLAD T SI+M+GEIGGSAEEEAA+FL E K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEMFLADPETTSIIMIGEIGGSAEEEAAEFLMAEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGGKG AE KI AMK AGI +A SPA +G ++++ + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGDAESKIEAMKRAGIVVADSPAHLGEAVLKAI 292 >gi|149184350|ref|ZP_01862668.1| succinyl-CoA synthetase, alpha subunit [Erythrobacter sp. SD-21] gi|148831670|gb|EDL50103.1| succinyl-CoA synthetase, alpha subunit [Erythrobacter sp. SD-21] Length = 296 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 203/300 (67%), Positives = 248/300 (82%), Gaps = 5/300 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNTKV+ QG+TG GTFHT+QA+ Y T++V G+ P KG T ++ +P F Sbjct: 1 MSILVDKNTKVITQGMTGNTGTFHTQQALDY-GTKMVAGVTPGKGGT----DHIGLPQFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK T A AS IYVPP A DAI+E+I+AE+ LIV ITEGIPVLDMV+VKA L S Sbjct: 56 TVAEAKAETGATASCIYVPPPFAADAILEAIDAEMELIVAITEGIPVLDMVKVKAALAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAV QT+ GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPEECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVHQTTMVGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+LFL D+ T+SI+M+GEIGGSAEEEAA+F+K EA +GR KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLDLFLDDDDTKSIIMIGEIGGSAEEEAAEFIKQEAAKGRSKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAPPGR MGHAGA++SGG+GGA+DKI AM++AGI ++PSP+ +G +L +L L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGQGGADDKIAAMEDAGIRVSPSPSELGTTLDAMLKEL 295 >gi|154251906|ref|YP_001412730.1| succinyl-CoA synthetase subunit alpha [Parvibaculum lavamentivorans DS-1] gi|154155856|gb|ABS63073.1| succinyl-CoA synthetase, alpha subunit [Parvibaculum lavamentivorans DS-1] Length = 291 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 198/297 (66%), Positives = 238/297 (80%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG + ++++PVF Sbjct: 1 MSVLVDKNTKVICQGFTGNQGTFHSEQAIAY-GTKMVGGVSPGKGGSK----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+T A AS IYVPP A DAI+E+I+A I L VCITEGIPVLDMV+VK L+ S Sbjct: 56 TVAEAVEKTGATASAIYVPPPFAADAILEAIDAGIELAVCITEGIPVLDMVKVKRALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RL+GPNCPG++TPD CKIGIMPG I + GSVGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 NTRLVGPNCPGVITPDECKIGIMPGHIHKPGSVGIVSRSGTLTYEAVAQTTAAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT FID LE+FL D T SI+M+GEIGGSAEE+AA+FLK KKPIV Sbjct: 176 IGIGGDPVNGTNFIDCLEMFLGDPDTTSIIMIGEIGGSAEEDAAEFLKASK---VKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPGR MGHAGA+ISGGKGGAEDK+ AM+ AGI +A SP+ +G +LVE+L Sbjct: 233 GFIAGVTAPPGRRMGHAGAIISGGKGGAEDKMEAMRSAGITVAKSPSALGTTLVEVL 289 >gi|297183588|gb|ADI19715.1| hypothetical protein [uncultured bacterium EB000_36F02] Length = 291 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 195/299 (65%), Positives = 240/299 (80%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KNTK++ QG TG GTFH+EQAI Y T + GG+ PKKG +++ PVF Sbjct: 1 MSVLVNKNTKLICQGFTGSHGTFHSEQAIKY-GTNLAGGVTPKKGGQK----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK+ T ANAS+IYVP A AIIE+I++EI LIVCITEGIPVLDM++VK +L +S Sbjct: 56 TVEEAKKETGANASMIYVPAKFAASAIIEAIDSEIELIVCITEGIPVLDMLKVKKKLSES 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP+ CK+GIMPG I +KGSVGI+SRSGTLTYEAV QT++ GLGQST Sbjct: 116 KSRLIGPNCPGIITPEECKVGIMPGKIHKKGSVGIVSRSGTLTYEAVAQTTETGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+LFL DE TESI+M+GEIGG+AEEEAA+F+K+ KKP+V Sbjct: 176 IGIGGDPINGTNFIDCLDLFLNDEETESILMIGEIGGTAEEEAAEFVKNHK---IKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKGGA+DKI M+E GI IA SP+ IG++L+ L + Sbjct: 233 GFIAGITAPPGRRMGHAGAIISGGKGGAKDKIKKMEECGIIIAQSPSEIGKTLLNKLSN 291 >gi|312113430|ref|YP_004011026.1| succinyl-CoA synthetase, subunit alpha [Rhodomicrobium vannielii ATCC 17100] gi|311218559|gb|ADP69927.1| succinyl-CoA synthetase, alpha subunit [Rhodomicrobium vannielii ATCC 17100] Length = 291 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 198/297 (66%), Positives = 238/297 (80%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVDKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG + G +PVF Sbjct: 1 MAILVDKNTKVICQGFTGAQGTFHSEQAIAY-GTKMVGGVTPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ++T ANA+ IYVPP A DAI+E+I+AEIPLIV ITEGIPV DM++VK L S Sbjct: 56 TVLDAVQKTGANATAIYVPPPFAADAILEAIDAEIPLIVTITEGIPVEDMIKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TP CKIGIMPG I ++GSVGI+SRSGTLTYEAV QT+ GLGQ+T Sbjct: 116 KSRLIGPNCPGVITPGECKIGIMPGHIHKRGSVGIVSRSGTLTYEAVHQTTLAGLGQTTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPVKGTE IDVLE+ LAD+ T+SI+M+GEIGGSAEEEAA F + + RKKPIV Sbjct: 176 IGIGGDPVKGTEHIDVLEMLLADDETQSIIMIGEIGGSAEEEAADFYRTSS---RKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPGR MGHAGA+I+GGKG A DKI AMK AGI ++PSPA +G +LVE+L Sbjct: 233 GFIAGVTAPPGRRMGHAGAIIAGGKGSAGDKIEAMKSAGIVVSPSPAALGSTLVEVL 289 >gi|163738926|ref|ZP_02146339.1| dihydrolipoamide acetyltransferase [Phaeobacter gallaeciensis BS107] gi|163741830|ref|ZP_02149220.1| succinyl-CoA synthase, alpha subunit [Phaeobacter gallaeciensis 2.10] gi|161385003|gb|EDQ09382.1| succinyl-CoA synthase, alpha subunit [Phaeobacter gallaeciensis 2.10] gi|161387731|gb|EDQ12087.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Phaeobacter gallaeciensis BS107] Length = 294 Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust. Identities = 197/298 (66%), Positives = 249/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG ++N+PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVKRALEDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QT+ GLGQSTA Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTADIGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVL++FL D+ T+SI+M+GEIGGSAEEEAA+F+ ++ K+GR KPI Sbjct: 176 VGIGGDPIKGTEHIDVLDMFLNDDETQSIIMIGEIGGSAEEEAAEFIAEQKKKGRWKPIA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AMK AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIVVADSPATLGEAVLKAIG 293 >gi|254486889|ref|ZP_05100094.1| succinyl-CoA synthase, alpha subunit [Roseobacter sp. GAI101] gi|214043758|gb|EEB84396.1| succinyl-CoA synthase, alpha subunit [Roseobacter sp. GAI101] Length = 285 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 190/287 (66%), Positives = 235/287 (81%), Gaps = 5/287 (1%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 ++ QGLTG GTFHTEQAI Y T++VGG+ P KG ++++PVF +V EA+ T Sbjct: 1 MICQGLTGSQGTFHTEQAIAY-GTKMVGGVTPGKGGQT----HLDLPVFNSVHEARHVTD 55 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 ANA+VIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM+RVK L+ S SRLIGPNCP Sbjct: 56 ANATVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMRVKRALDGSKSRLIGPNCP 115 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G++TPD+CKIGIMPG I ++GS G++SRSGTLTYEAV QTS GLGQS+AVGIGGDP+KG Sbjct: 116 GVITPDACKIGIMPGHIHKRGSCGVVSRSGTLTYEAVKQTSDLGLGQSSAVGIGGDPIKG 175 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 +E ID+LE+FLAD T SI+M+GEIGGSAEEEAAQFL DE K+GR KP GF+AG+TAPP Sbjct: 176 SEHIDILEMFLADPETHSIIMIGEIGGSAEEEAAQFLADEKKKGRWKPTAGFIAGRTAPP 235 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GR MGHAGA+++GGKG AE KINAM+EAGI +A SPA +G ++ E + Sbjct: 236 GRRMGHAGAIVAGGKGDAESKINAMREAGIVVADSPATLGEAVQEAI 282 >gi|254475089|ref|ZP_05088475.1| succinyl-CoA ligase, alpha subunit [Ruegeria sp. R11] gi|214029332|gb|EEB70167.1| succinyl-CoA ligase, alpha subunit [Ruegeria sp. R11] Length = 294 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 198/298 (66%), Positives = 248/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG ++N+PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVKRALEDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QT+ GLGQSTA Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTADIGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVL++FL D TESI+M+GEIGGSAEEEAA+FL ++ K+GR KP+ Sbjct: 176 VGIGGDPIKGTEHIDVLDMFLDDPETESIIMIGEIGGSAEEEAAEFLAEQKKKGRWKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AMK AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIVVADSPATLGEAVLKAIG 293 >gi|99078488|ref|YP_611746.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ruegeria sp. TM1040] gi|99035626|gb|ABF62484.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ruegeria sp. TM1040] Length = 295 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 196/293 (66%), Positives = 246/293 (83%), Gaps = 5/293 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QGLTG GTFHTEQAI Y T++VGG+ P KG ++++PVF Sbjct: 1 MAVLIDENTKVICQGLTGSQGTFHTEQAIAY-GTKMVGGVTPGKGGQT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++V+ LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVQRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQS+A Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDIGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVL++FL D+ T+SI+M+GEIGGSAEEEAA+F+ ++ K+GR KPI Sbjct: 176 VGIGGDPIKGTEHIDVLDMFLDDDETQSIIMIGEIGGSAEEEAAEFIAEQKKKGRWKPIA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AMK AGI +A SPA +G ++ Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIVVADSPATLGEAV 288 >gi|259415235|ref|ZP_05739157.1| succinyl-CoA ligase, alpha subunit [Silicibacter sp. TrichCH4B] gi|259349145|gb|EEW60899.1| succinyl-CoA ligase, alpha subunit [Silicibacter sp. TrichCH4B] Length = 295 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 197/293 (67%), Positives = 245/293 (83%), Gaps = 5/293 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QGLTG GTFHTEQAI Y T++VGG+ P KG ++++PVF Sbjct: 1 MAVLIDENTKVICQGLTGSQGTFHTEQAIAY-GTKMVGGVTPGKGGQK----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVKRALETS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQS+A Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDIGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVL++FL D T+SI+M+GEIGGSAEEEAA+F+ ++ K+GR KPI Sbjct: 176 VGIGGDPIKGTEHIDVLDMFLDDPETQSIIMIGEIGGSAEEEAAEFIAEQKKKGRWKPIA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AMK AGI +A SPA +G ++ Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIVVADSPATLGEAV 288 >gi|296532582|ref|ZP_06895287.1| succinate--CoA ligase (ADP-forming) [Roseomonas cervicalis ATCC 49957] gi|296267073|gb|EFH12993.1| succinate--CoA ligase (ADP-forming) [Roseomonas cervicalis ATCC 49957] Length = 296 Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust. Identities = 195/299 (65%), Positives = 235/299 (78%), Gaps = 7/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVD NTKV+ QG TG GTFH EQ I Y ++ VGG+ P KG G +PVF Sbjct: 1 MAILVDANTKVMTQGFTGSQGTFHAEQGIAY-GSKYVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAE E T A ASVIYVPP AGD+I+E+I+AEIPLI+CITEGIPV DM++VK L S Sbjct: 56 TVAECAEATGATASVIYVPPPFAGDSILEAIDAEIPLIICITEGIPVTDMIKVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++G+VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGTVGIVSRSGTLTYEAVAQTTAAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK--KP 238 VGIGGDPVKGT+F +VLE+FLAD T+SI+M+GEIGG +E +AA+FL E K G K KP Sbjct: 176 VGIGGDPVKGTDFTEVLEMFLADPETQSIIMIGEIGGQSEIQAAEFLGRENKPGSKNYKP 235 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG TAPPGR MGHAGAVISGGK AE K++AM+EAGI +A SPA +G ++V+ L Sbjct: 236 VVGFIAGATAPPGRRMGHAGAVISGGKDTAEAKMSAMREAGIHVAESPAALGSTMVKAL 294 >gi|85374425|ref|YP_458487.1| succinyl-CoA synthetase, alpha subunit [Erythrobacter litoralis HTCC2594] gi|84787508|gb|ABC63690.1| succinyl-CoA synthetase, alpha subunit [Erythrobacter litoralis HTCC2594] Length = 296 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 203/297 (68%), Positives = 242/297 (81%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+ QG+TG GTFHT+QA+ Y TQ+V G+ P KG T G +P F Sbjct: 1 MSILVNKDTKVITQGMTGNTGTFHTQQALDY-GTQMVAGVTPGKGGTEHIG----LPQFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK+ T A AS IYVPP A DAI E+I+A I LI+CITEGIPVLDMVR K L+ S Sbjct: 56 TVREAKDATGATASCIYVPPPFAADAICEAIDAGIELIICITEGIPVLDMVRAKRALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPG+LTPD CKIGIMPGSIF+KGSVG++SRSGTLTYEAV QT+ GLGQSTA Sbjct: 116 NSRLIGPNCPGVLTPDECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVHQTTMVGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+LFL D T+S++M+GEIGGSAEEEAA FLK EA +GR KP V Sbjct: 176 VGIGGDPVNGTNFIDVLDLFLDDPETKSMIMIGEIGGSAEEEAAAFLKAEAAKGRSKPTV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGGKGGA+DKI AM++AGI ++PSP+ +G +L +L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGGADDKIAAMEDAGIRVSPSPSELGTTLDAML 292 >gi|148260622|ref|YP_001234749.1| succinyl-CoA synthetase, alpha subunit [Acidiphilium cryptum JF-5] gi|326403816|ref|YP_004283898.1| succinyl-CoA ligase alpha subunit [Acidiphilium multivorum AIU301] gi|146402303|gb|ABQ30830.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Acidiphilium cryptum JF-5] gi|325050678|dbj|BAJ81016.1| succinyl-CoA ligase alpha subunit [Acidiphilium multivorum AIU301] Length = 291 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 192/297 (64%), Positives = 235/297 (79%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+ TKV+ QG TG GTFH+EQAI Y T+V+GG+ P KG T ++++PVF Sbjct: 1 MAILVNAETKVITQGFTGAQGTFHSEQAIAY-GTKVMGGVTPGKGGTR----HLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E T A+AS IYVPP A DAI+E+I+AEIPLIVCITEGIPVLDMV+V L S Sbjct: 56 TVAEAREATGADASAIYVPPPFAADAILEAIDAEIPLIVCITEGIPVLDMVKVHRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S L+GPNCPG++TPD+CKIGIMPG I R+G VGI+SRSGTLTYEAV QT+ GLGQS+ Sbjct: 116 KSILVGPNCPGVITPDACKIGIMPGHIHRRGKVGIVSRSGTLTYEAVAQTTAAGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKG +F+DVLE+FLAD TE+++M+GEIGG +E EAA+FL A+ KKP V Sbjct: 176 VGIGGDPVKGLDFVDVLEMFLADNETEALIMIGEIGGQSEIEAAEFL---ARNKVKKPTV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPGR MGHAGAVISGG+ A+ KI AMK AGI +A SPA +G ++V+ L Sbjct: 233 GFIAGVTAPPGRRMGHAGAVISGGRDTAQAKIEAMKAAGIHVADSPASLGSTMVKAL 289 >gi|330994297|ref|ZP_08318225.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Gluconacetobacter sp. SXCC-1] gi|329758764|gb|EGG75280.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Gluconacetobacter sp. SXCC-1] Length = 290 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 196/298 (65%), Positives = 232/298 (77%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+ QG TG GTFHTEQAI Y T++VGG+ P KG + G +PVF Sbjct: 1 MSILVNKSTKVITQGFTGAQGTFHTEQAIAY-GTRMVGGVTPGKGGSEHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A+E T A+ASVIYVPP+GA DAI+E+I AEIPLIVCITEGIPV DMVRV+A LE+S Sbjct: 56 TVCQAREATGADASVIYVPPAGAADAILEAIAAEIPLIVCITEGIPVQDMVRVRAALERS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPGI+TPD CKIGIMPG I R+G VGI+SRSGTLTYEAV QTS G GQST Sbjct: 116 GSLLIGPNCPGIITPDECKIGIMPGPIHRRGHVGIVSRSGTLTYEAVAQTSAIGQGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKG +F DVLE +AD T SIVM+GEIGG++E E A+ ++ G +KP+V Sbjct: 176 VGIGGDPVKGMDFTDVLERMIADPDTHSIVMIGEIGGTSEIEGAELIR---ASGTRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAPPGR MGHAGAVI+GG A KI AM+EAGI I+ SPA +G +L +LG Sbjct: 233 GFIAGATAPPGRRMGHAGAVITGGHETASAKIEAMREAGIHISHSPAELGVTLARVLG 290 >gi|114328733|ref|YP_745890.1| succinyl-CoA synthetase alpha chain [Granulibacter bethesdensis CGDNIH1] gi|114316907|gb|ABI62967.1| succinyl-CoA synthetase alpha chain [Granulibacter bethesdensis CGDNIH1] Length = 291 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 188/297 (63%), Positives = 237/297 (79%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ +T++LVQGLTG GTFHTEQAI Y TQVVGG+ P KG + ++++PVF Sbjct: 1 MSILIGSHTRLLVQGLTGAQGTFHTEQAIAY-GTQVVGGVTPGKGGSR----HLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+ERT A+ASVIYVPP A DAI+E+I+A +PL+VCITEGIPVLDMVRV+ LE + Sbjct: 56 TVMEARERTGADASVIYVPPPHAADAILEAIDAGMPLVVCITEGIPVLDMVRVRRALEGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP +CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 HTRLIGPNCPGVITPGACKIGIMPGHIHKRGRIGIVSRSGTLTYEAVAQTTAAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGT+FI+VLE+FL D TE+IVM+GEIGG +E AA++L G KP+V Sbjct: 176 VGIGGDPVKGTDFIEVLEMFLKDPETEAIVMIGEIGGQSEIHAAEYL---IASGADKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG +APPGR MGHAGAVISGG+ AE K NA++ AG+ IA SP+ +G ++++ L Sbjct: 233 GFIAGSSAPPGRRMGHAGAVISGGRDTAEAKYNALRAAGVHIAQSPSTLGETMLKAL 289 >gi|296115263|ref|ZP_06833903.1| succinyl-CoA synthetase, alpha subunit [Gluconacetobacter hansenii ATCC 23769] gi|295978166|gb|EFG84904.1| succinyl-CoA synthetase, alpha subunit [Gluconacetobacter hansenii ATCC 23769] Length = 290 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 195/298 (65%), Positives = 231/298 (77%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+ +TKV+ QG TG GTFHTEQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSILVNSSTKVITQGFTGAQGTFHTEQAIAY-GTRMVGGVTPGKGGEVHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A+E T A+ASVIYVPP+GA DAI+E+I AEIPLIVCITEGIPVLDMVRV+ LE+S Sbjct: 56 TVAQAREATGADASVIYVPPAGAADAILEAIAAEIPLIVCITEGIPVLDMVRVRMALERS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SS L+GPNCPG++TP CKIGIMPG I R+G VGI+SRSGTLTYEAV QTS G GQST Sbjct: 116 SSLLVGPNCPGVITPGECKIGIMPGPIHRRGHVGIVSRSGTLTYEAVAQTSAIGQGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKG +F DVLE +AD T SIVM+GEIGG++E E A+ ++ G KKP+V Sbjct: 176 VGIGGDPVKGMDFTDVLERLIADPDTHSIVMIGEIGGTSEIEGAELIR---ASGTKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAPPGR MGHAGAVI+GG A KI AM+EAGI I+ SPA +G +L +LG Sbjct: 233 GFIAGATAPPGRRMGHAGAVITGGHETAAAKIEAMREAGIHISASPAELGTTLARILG 290 >gi|260425312|ref|ZP_05779292.1| succinyl-CoA ligase, alpha subunit [Citreicella sp. SE45] gi|260423252|gb|EEX16502.1| succinyl-CoA ligase, alpha subunit [Citreicella sp. SE45] Length = 294 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 195/294 (66%), Positives = 238/294 (80%), Gaps = 5/294 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MAVLVDANTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQDHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA T ANASVIYVPP A D+I+E+I+AEIPLIVCITEGIPVLDM+RVK L S Sbjct: 56 SVHEAVHVTGANASVIYVPPPFAADSILEAIDAEIPLIVCITEGIPVLDMMRVKRALIDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPG++TPD+CKIGIMPG I ++G VG++SRSGTLTYEAV QT+ GLGQS+A Sbjct: 116 SSRLIGPNCPGVITPDACKIGIMPGHIHKRGKVGVVSRSGTLTYEAVKQTTDLGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVL++FL D TE+I+M+GEIGGSAEEEAA F+ ++ K+GR KPI Sbjct: 176 VGIGGDPIKGTEHIDVLDMFLDDPETEAIIMIGEIGGSAEEEAAAFIAEQKKKGRWKPIA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMK AGI +A SPA +G +++ Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEAMKSAGIVVADSPATLGEAVM 289 >gi|71082943|ref|YP_265662.1| succinyl-CoA synthetase subunit alpha (SCS-alpha) [Candidatus Pelagibacter ubique HTCC1062] gi|71062056|gb|AAZ21059.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Candidatus Pelagibacter ubique HTCC1062] Length = 291 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 196/299 (65%), Positives = 238/299 (79%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GTFH+EQA+ Y T +VGG+ PKKG +++ PVF Sbjct: 1 MSVLIDKNTKVICQGFTGTHGTFHSEQALKY-GTNLVGGVTPKKGGQK----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK+ A+A++IYVP A AIIE+I+A I LIVCITEG+P+ DM+RVK +L S Sbjct: 56 TVAEAKQEVGADATMIYVPAKFAAAAIIEAIDASIELIVCITEGVPIQDMLRVKQKLNNS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TPD CKIGIMPG+I +KGSVGI+SRSGTLTYEAV QT++ GLGQST Sbjct: 116 KSRLIGPNCPGIITPDECKIGIMPGNIHKKGSVGIVSRSGTLTYEAVAQTTENGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+LFL D TESI+M+GEIGGSAEEEAA+F+K+ KKP+V Sbjct: 176 IGIGGDPINGTNFIDCLDLFLNDAETESILMIGEIGGSAEEEAAEFVKNHK---IKKPMV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GFVAG TAPPGRTMGHAGA+ISGGKGGAEDKI M+E GI IA SP+ +G++L L + Sbjct: 233 GFVAGITAPPGRTMGHAGAIISGGKGGAEDKIKKMEECGITIAKSPSELGKTLFNKLSN 291 >gi|91206042|ref|YP_538397.1| succinyl-CoA synthetase subunit alpha [Rickettsia bellii RML369-C] gi|122425252|sp|Q1RH56|SUCD_RICBR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|91069586|gb|ABE05308.1| Succinyl-CoA synthetase alpha chain [Rickettsia bellii RML369-C] Length = 291 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 186/297 (62%), Positives = 234/297 (78%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+K TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG ++++P++ Sbjct: 1 MAILVNKKTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGKT----HLDLPIYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+A I ++VCITEGIPVLDMVRVK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPPFAADSILEAIDAGIEIVVCITEGIPVLDMVRVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TPD CKIGIMPG I RKGS+GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 RTRLIGPNCPGIITPDECKIGIMPGHIHRKGSIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +++FL D+ T++I+M+GEIGG AEE AA F+K KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIDMFLQDDETKAIIMIGEIGGDAEENAADFIKHSK---IKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPG+ MGHAGA+I+GGKG AEDK+ A++ AG+ I SPA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIAGGKGSAEDKLEALQSAGVTITRSPADIGKTMLDLL 289 >gi|157826591|ref|YP_001495655.1| succinyl-CoA synthetase subunit alpha [Rickettsia bellii OSU 85-389] gi|157801895|gb|ABV78618.1| succinyl-CoA synthetase subunit alpha [Rickettsia bellii OSU 85-389] Length = 291 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 185/297 (62%), Positives = 234/297 (78%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+K TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG ++++P++ Sbjct: 1 MAILVNKKTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGKT----HLDLPIYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+A I ++VCITEGIPVLDMVRVK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPPFAADSILEAIDAGIEIVVCITEGIPVLDMVRVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TPD CKIGIMPG I RKGS+GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 RTRLIGPNCPGIITPDECKIGIMPGHIHRKGSIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F+D +++FL D+ T++I+M+GEIGG AEE AA F+K KKPIV Sbjct: 176 VGIGGDPINGTNFVDCIDMFLQDDETKAIIMIGEIGGDAEENAADFIKHSK---IKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPG+ MGHAGA+I+GGKG AEDK+ A++ AG+ I SPA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIAGGKGSAEDKLEALQSAGVTITRSPADIGKTMLDLL 289 >gi|119383310|ref|YP_914366.1| succinyl-CoA synthetase, alpha subunit [Paracoccus denitrificans PD1222] gi|119373077|gb|ABL68670.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Paracoccus denitrificans PD1222] Length = 294 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 197/298 (66%), Positives = 241/298 (80%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+K+TKV+ QG+TG GTFHTEQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAVLVNKDTKVICQGITGSQGTFHTEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA +T ANA+ IYVPP A D+I+E+I+AEIPLIV ITEGIPVLDM++VK LE S Sbjct: 56 SVHEAVAKTGANATAIYVPPPFAADSILEAIDAEIPLIVAITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPGI+TPD CKIGIMPGSIF++GSVG++SRSGTLTYEAV QTS GLGQS+A Sbjct: 116 KSLLIGPNCPGIMTPDECKIGIMPGSIFKRGSVGVVSRSGTLTYEAVKQTSDVGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KG E IDVL +FL D TESI+M+GEIGGSAEEEAA+FL ++ ++G+ KP Sbjct: 176 VGIGGDPIKGMEHIDVLRMFLDDPETESIIMIGEIGGSAEEEAAEFLAEQKRKGKWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GR MGHAGA++SGGKG AE KI AMK AGI +A SPA +G ++++ LG Sbjct: 236 GFIAGRTAPKGRRMGHAGAIVSGGKGDAESKIEAMKSAGIVVADSPAGLGEAVLKALG 293 >gi|75150501|sp|Q8GTQ9|SUCA1_SOLLC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial; Short=SlSCoALalpha1; Flags: Precursor gi|27357175|gb|AAN86619.1| succinyl-CoA ligase alpha 1 subunit [Solanum lycopersicum] Length = 332 Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust. Identities = 191/297 (64%), Positives = 231/297 (77%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF T Sbjct: 38 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNT 92 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EAK T ANASVIYVPP A AI+E +EAE+ LIVCITEGIP DMVRVKA L+K S Sbjct: 93 VEEAKAETKANASVIYVPPPFAAAAIMEGLEAELDLIVCITEGIPQHDMVRVKAALKKQS 152 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 153 RTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTC 212 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+AD TE IV++GEIGG+AEE+AA +K+ G +KP+V Sbjct: 213 VGIGGDPFNGTNFVDCLEKFIADPQTEGIVLIGEIGGTAEEDAAALIKES---GTQKPVV 269 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DKI A+KEAG+ + SPA+IG S++E+ Sbjct: 270 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALKEAGVTVCESPAKIGVSMLEVF 326 >gi|91762633|ref|ZP_01264598.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Candidatus Pelagibacter ubique HTCC1002] gi|91718435|gb|EAS85085.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Candidatus Pelagibacter ubique HTCC1002] Length = 291 Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust. Identities = 195/299 (65%), Positives = 238/299 (79%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+ QG TG GTFH+EQA+ Y T +VGG+ PKKG +++ PVF Sbjct: 1 MSVLINKNTKVICQGFTGTHGTFHSEQALKY-GTNLVGGVTPKKGGQK----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK+ A+A++IYVP A AIIE+I+A I LIVCITEG+P+ DM+RVK +L S Sbjct: 56 TVAEAKQEVGADATMIYVPAKFAAAAIIEAIDASIELIVCITEGVPIQDMLRVKQKLNNS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TPD CKIGIMPG+I +KGSVGI+SRSGTLTYEAV QT++ GLGQST Sbjct: 116 KSRLIGPNCPGIITPDECKIGIMPGNIHKKGSVGIVSRSGTLTYEAVAQTTENGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+LFL D TESI+M+GEIGGSAEEEAA+F+K+ KKP+V Sbjct: 176 IGIGGDPINGTNFIDCLDLFLNDAETESILMIGEIGGSAEEEAAEFVKNHK---IKKPMV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GFVAG TAPPGRTMGHAGA+ISGGKGGAEDKI M+E GI IA SP+ +G++L L + Sbjct: 233 GFVAGITAPPGRTMGHAGAIISGGKGGAEDKIKKMEECGITIAKSPSELGKTLFNKLSN 291 >gi|294085400|ref|YP_003552160.1| succinyl-CoA synthetase subunit alpha [Candidatus Puniceispirillum marinum IMCC1322] gi|292664975|gb|ADE40076.1| succinyl-CoA synthetase, alpha subunit [Candidatus Puniceispirillum marinum IMCC1322] Length = 313 Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust. Identities = 188/299 (62%), Positives = 232/299 (77%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+T+V+ QG TG GTFH+EQAI Y T++VGG+ P KG ++++PVF Sbjct: 20 MSVLVNKDTRVICQGFTGAQGTFHSEQAIAY-GTKMVGGVTPGKGGQT----HLDLPVFN 74 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA T ANASVIYVPP A D+I+E+I+A +PLIVCITEGIPVLDMV+VK L+ S Sbjct: 75 SVVEAMRETEANASVIYVPPPFAADSIMEAIDAGMPLIVCITEGIPVLDMVKVKRALDAS 134 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 135 KSRLIGPNCPGIITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVAQTTAAGLGQSTC 194 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID LE+FLAD+ TE+IVM+GEIGGSAEE+AA + + R KPI Sbjct: 195 VGIGGDPVNGTNFIDCLEMFLADDQTEAIVMIGEIGGSAEEDAAAYYMAQPNR---KPIA 251 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA++SGG G A DKI AM+ AG +A SPA +G +++ +G+ Sbjct: 252 GFIAGQTAPPGRRMGHAGAIVSGGSGAAVDKIAAMETAGFVMASSPAALGDAVMTAIGN 310 >gi|295399797|ref|ZP_06809778.1| succinyl-CoA synthetase, alpha subunit [Geobacillus thermoglucosidasius C56-YS93] gi|312111691|ref|YP_003990007.1| succinyl-CoA synthetase, subunit alpha [Geobacillus sp. Y4.1MC1] gi|294978200|gb|EFG53797.1| succinyl-CoA synthetase, alpha subunit [Geobacillus thermoglucosidasius C56-YS93] gi|311216792|gb|ADP75396.1| succinyl-CoA synthetase, alpha subunit [Geobacillus sp. Y4.1MC1] Length = 300 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 185/297 (62%), Positives = 234/297 (78%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVFINKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTEIEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA E+T ANASVIYVPP+ A DAI+E+++AE+ L+VCITEGIPVLDMV+VK +E Sbjct: 56 TVSEAVEKTGANASVIYVPPAFAADAIMEAVDAELDLVVCITEGIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +Q G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T +++M+GEIGG+AEEEAA+++ K KKP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDEETYAVIMIGEIGGTAEEEAAEWV----KANMKKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI M E GI +A +PA IG +L+ +L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKKMNECGIKVAETPAVIGETLIAVL 288 >gi|239826602|ref|YP_002949226.1| succinyl-CoA synthetase subunit alpha [Geobacillus sp. WCH70] gi|239806895|gb|ACS23960.1| succinyl-CoA synthetase, alpha subunit [Geobacillus sp. WCH70] Length = 300 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 185/297 (62%), Positives = 234/297 (78%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K+TKV+VQG+TG G FHT+Q + Y T++VGG+ P KG T G VPVF Sbjct: 1 MSIFINKDTKVIVQGITGSQGLFHTKQMLEY-GTKIVGGVTPGKGGTEVEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA E+T ANASVIYVPP+ A DAI+E+++AE+ L+VCITEGIPVLDMV+VK +E Sbjct: 56 TVSEAVEKTGANASVIYVPPAFAADAIMEAVDAELDLVVCITEGIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +Q G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T +++M+GEIGG+AEEEAA+++ K KKP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDEETYAVIMIGEIGGTAEEEAAEWV----KANMKKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI M E GI +A +PA IG +L+ +L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKKMNECGIKVAETPAVIGETLISVL 288 >gi|295696102|ref|YP_003589340.1| succinyl-CoA synthetase, alpha subunit [Bacillus tusciae DSM 2912] gi|295411704|gb|ADG06196.1| succinyl-CoA synthetase, alpha subunit [Bacillus tusciae DSM 2912] Length = 305 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 187/297 (62%), Positives = 232/297 (78%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD+NTKV+ QG+TG G FHT+QA+ Y T+VV G+ P KG T G VPVF Sbjct: 1 MSILVDRNTKVVTQGITGSTGLFHTKQALEY-GTKVVAGVTPGKGGTVIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 VAEA + T ANASVIYVPP+ A DAI+E+ +A + L++CITEGIPVLDMV+VK LE Sbjct: 56 KVAEAVKETGANASVIYVPPAFAADAIMEAADAGLELVICITEGIPVLDMVKVKRYLEGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TPD CKIGIMPG I R G VG++SRSGTLTYEAV Q + G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPDQCKIGIMPGYIHRPGHVGVVSRSGTLTYEAVHQLTTRGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+LF D TE+++M+GEIGG+AEEEAA+++K KKP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKLFNEDPETEAVIMIGEIGGTAEEEAAEWIKANM----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAP G+ MGHAGA+ISGGKG A +KI +KE G+ +AP+PA++G +LVE+L Sbjct: 232 GFIAGATAPKGKRMGHAGAIISGGKGTAAEKIAKLKECGVRVAPTPAQMGETLVEVL 288 >gi|67459056|ref|YP_246680.1| succinyl-CoA synthetase subunit alpha [Rickettsia felis URRWXCal2] gi|75536510|sp|Q4ULQ8|SUCD_RICFE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|67004589|gb|AAY61515.1| Succinyl-CoA synthetase alpha chain [Rickettsia felis URRWXCal2] Length = 292 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 181/297 (60%), Positives = 236/297 (79%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K TKV+ QG TG GTFH+EQAI Y T +VGG+ P KG ++++PV+ Sbjct: 1 MAILINKKTKVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGHT----HLDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+AEI ++VCITEGIPVLDMV+VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMVKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +++FL D+ T++I+M+GEIGG+AEE+AA+F+K + KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIDMFLKDDETKAIIMIGEIGGNAEEDAAEFIK---QSKIKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPG+ MGHAGA+I+GGKG AEDK+ A++ AG+ I SPA IG+++ +LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIAGGKGSAEDKLEALQSAGVTITRSPADIGKTMFDLL 289 >gi|212639578|ref|YP_002316098.1| succinyl-CoA synthetase subunit alpha [Anoxybacillus flavithermus WK1] gi|212561058|gb|ACJ34113.1| Succinyl-CoA synthetase, alpha subunit [Anoxybacillus flavithermus WK1] Length = 300 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 186/297 (62%), Positives = 232/297 (78%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ V+K+TKV+VQG+TG G FHT+Q I Y T +VGG+ P KG T G VPVF Sbjct: 1 MSVFVNKDTKVIVQGITGSQGLFHTKQMIEY-GTNIVGGVTPGKGGTEVEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA E+T ANASVIYVPP+ A DAI+E+++AEI L+VCITEGIPVLDMV+VK +E Sbjct: 56 TVSEAVEKTGANASVIYVPPAFAADAIMEAVDAEIDLVVCITEGIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +Q G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDEDTYAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI M GI +A +PA IG +L+ +L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTMTACGIKVAETPAVIGETLISVL 288 >gi|239947281|ref|ZP_04699034.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Rickettsia endosymbiont of Ixodes scapularis] gi|239921557|gb|EER21581.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Rickettsia endosymbiont of Ixodes scapularis] Length = 292 Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust. Identities = 181/297 (60%), Positives = 236/297 (79%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K TKV+ QG TG GTFH+EQAI Y T +VGG+ P KG ++++PV+ Sbjct: 1 MAILINKKTKVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGHT----HLDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+AEI ++VCITEGIPVLDMV+VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMVKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV T F+D +E+FL D+ T++I+M+GEIGG+AEE+AA+F+K + KKPIV Sbjct: 176 VGIGGDPVNDTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDAAEFIK---QSKIKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPG+ MGHAGA+I+GGKG AEDK+ A++ AG+ I SPA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIAGGKGSAEDKLEALQSAGVTITRSPADIGKTMLDLL 289 >gi|13235375|emb|CAC33597.1| Succinyl-CoA synthetase alpha subunit [Rickettsia montanensis] Length = 292 Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 181/297 (60%), Positives = 236/297 (79%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K T+V+ QG TG GTFH+EQAI Y T +VGG+ P KG ++++PV+ Sbjct: 1 MAILINKKTQVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGHT----HLDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+AEI ++VCITEGIPVLDMV+VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMVKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTTVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +E+FL D+ T++I+M+GEIGG+AEE+AA+F+K + KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDAAEFIK---QSKIKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPG+ MGHAGA+I+GG G AEDKI A++ AG+ I SPA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIAGGTGSAEDKIEALQSAGVTITRSPADIGKTMLDLL 289 >gi|118602195|ref|YP_903410.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567134|gb|ABL01939.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 289 Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 178/297 (59%), Positives = 232/297 (78%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNT+V+ QG TGK GTFH+EQ+I Y TQ VGG+ P KG ++N PVF Sbjct: 1 MSVLIDKNTRVITQGFTGKQGTFHSEQSITY-GTQFVGGVTPNKGGQK----HLNFPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T ANAS+IYVPP A +I+E+IEA++P+IVCITEGIP+ DM+++KA L+ S Sbjct: 56 TVAEAMNATNANASMIYVPPQFAYVSILEAIEAQMPVIVCITEGIPIQDMLKIKAILKTS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++TPD CK+GIMPG+I + GSVG++SRSGTLTYEAV QT+Q GLGQST Sbjct: 116 DSILIGPNCPGVITPDECKLGIMPGNIHQNGSVGVISRSGTLTYEAVHQTTQSGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP++G F+D L LF D T+SI+MVGEIGGSAEEEAA++++ KP+V Sbjct: 176 IGIGGDPIQGMSFVDCLALFEMDPQTQSIIMVGEIGGSAEEEAAEYIQSNV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG +AP G+ MGHAGAVI+ G A DKINA+K+ G+ IAP+PA +G++L+E+L Sbjct: 232 SYIAGLSAPKGKRMGHAGAVINASTGKAIDKINALKKVGVAIAPTPATMGKTLLEIL 288 >gi|126740515|ref|ZP_01756202.1| succinyl-CoA synthase, alpha subunit [Roseobacter sp. SK209-2-6] gi|126718316|gb|EBA15031.1| succinyl-CoA synthase, alpha subunit [Roseobacter sp. SK209-2-6] Length = 294 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 199/297 (67%), Positives = 249/297 (83%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG ++N+PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQS----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM+RV+ LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMRVQRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQS+A Sbjct: 116 SSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDIGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVL+LFL D+ TESI+M+GEIGGSAEEEAA+FL ++ K+GR KP+ Sbjct: 176 VGIGGDPIKGTEHIDVLDLFLDDDETESIIMIGEIGGSAEEEAAEFLAEQKKKGRWKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AMK AGI +A SPA +G ++++ + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKAAGIVVAESPAGLGEAVLKAI 292 >gi|138894730|ref|YP_001125183.1| succinyl-CoA synthetase subunit alpha [Geobacillus thermodenitrificans NG80-2] gi|196247651|ref|ZP_03146353.1| succinyl-CoA synthetase, alpha subunit [Geobacillus sp. G11MC16] gi|134266243|gb|ABO66438.1| Succinyl-CoA synthetase (alpha subunit) [Geobacillus thermodenitrificans NG80-2] gi|196212435|gb|EDY07192.1| succinyl-CoA synthetase, alpha subunit [Geobacillus sp. G11MC16] Length = 300 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 184/297 (61%), Positives = 232/297 (78%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ V+K+TKV+VQG+TG G FHT+Q I Y T +VGG+ P KG T G VPVF Sbjct: 1 MSVFVNKDTKVIVQGITGSQGLFHTKQMIEY-GTNIVGGVTPGKGGTEVEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA E+T ANASVIYVPP+ A DAI+E+++AE+ L+VCITEGIPVLDMV+VK +E Sbjct: 56 TVSEAVEKTGANASVIYVPPAFAADAIMEAVDAELDLVVCITEGIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +Q G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETYAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI M E GI +A +PA IG +L+ +L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKKMNECGIKVAETPAVIGETLISVL 288 >gi|157803808|ref|YP_001492357.1| succinyl-CoA synthetase subunit alpha [Rickettsia canadensis str. McKiel] gi|157785071|gb|ABV73572.1| succinyl-CoA synthetase alpha subunit [Rickettsia canadensis str. McKiel] Length = 292 Score = 366 bits (939), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 183/297 (61%), Positives = 234/297 (78%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K TKV+ QG TG GTFH+EQAI Y T +VGG+ P KG ++++PV+ Sbjct: 1 MSILINKKTKVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGDT----HLDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+AEI ++VCITEGIPVLDMV+VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMVKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGYIHQRGIVGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +E+FL D+ T++I+M+GEIGG+AEE+A+ F+K + KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDASDFIK---QSKIKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPG+ MGHAGA+I+GGKG AEDK+ A++ AGI I PA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIAGGKGSAEDKLEALQSAGITITRCPADIGKTMLDLL 289 >gi|157825717|ref|YP_001493437.1| succinyl-CoA synthetase subunit alpha [Rickettsia akari str. Hartford] gi|157799675|gb|ABV74929.1| succinyl-CoA synthetase subunit alpha [Rickettsia akari str. Hartford] Length = 292 Score = 366 bits (939), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 179/297 (60%), Positives = 236/297 (79%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K TKV+ QG TG GTFH+EQAI Y T +VGGI P KG ++++PV+ Sbjct: 1 MAILINKKTKVICQGFTGSQGTFHSEQAIAY-GTNMVGGITPGKGGHT----HLDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPPS A D+I+E+I+A+I ++VCITEGIP+LDMV+VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPSFAADSILEAIDAKIEVVVCITEGIPILDMVKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +++FL D+ T++I+M+GEIGG+AEE+AA+F+K + KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIDMFLKDDETKAIIMIGEIGGNAEEDAAEFIK---QSKIKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPG+ MGHAGA+I+GG+G AEDK+ ++ AG+ I SPA IG+++ +LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIAGGQGSAEDKLEVLQSAGVTITKSPADIGKTMFDLL 289 >gi|168020790|ref|XP_001762925.1| predicted protein [Physcomitrella patens subsp. patens] gi|162685737|gb|EDQ72130.1| predicted protein [Physcomitrella patens subsp. patens] Length = 324 Score = 365 bits (936), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 186/297 (62%), Positives = 231/297 (77%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF T Sbjct: 30 AVFVDKTTRVICQGITGKNGTFHTEQAIDY-GTNMVGGVTPKKGGTEHLG----LPVFNT 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 VAEAK+ T ANASVIYVP S A +AI+E+++AE+ L+VCITEGIP DMV+VK A L++S Sbjct: 85 VAEAKKETRANASVIYVPASLAANAILEALDAELDLVVCITEGIPQHDMVKVKSALLQQS 144 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 145 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTC 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE IV++GEIGGSAEE+AA F+K+ G +KP+V Sbjct: 205 VGIGGDPFNGTNFVDCLEKFVNDPQTEGIVLIGEIGGSAEEDAAAFIKES---GTQKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKG A DKINA++ AG+ + SPA+IG +++ + Sbjct: 262 SFIAGLTAPPGRRMGHAGAIISGGKGTATDKINALRAAGVTVCESPAQIGSTMLRVF 318 >gi|56419744|ref|YP_147062.1| succinyl-CoA synthetase subunit alpha [Geobacillus kaustophilus HTA426] gi|261419409|ref|YP_003253091.1| succinyl-CoA synthetase subunit alpha [Geobacillus sp. Y412MC61] gi|297530616|ref|YP_003671891.1| succinyl-CoA synthetase, subunit alpha [Geobacillus sp. C56-T3] gi|319766224|ref|YP_004131725.1| succinyl-CoA synthetase, subunit alpha [Geobacillus sp. Y412MC52] gi|56379586|dbj|BAD75494.1| succinyl-CoA synthetase alpha subunit [Geobacillus kaustophilus HTA426] gi|261375866|gb|ACX78609.1| succinyl-CoA synthetase, alpha subunit [Geobacillus sp. Y412MC61] gi|297253868|gb|ADI27314.1| succinyl-CoA synthetase, alpha subunit [Geobacillus sp. C56-T3] gi|317111090|gb|ADU93582.1| succinyl-CoA synthetase, alpha subunit [Geobacillus sp. Y412MC52] Length = 300 Score = 365 bits (936), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 185/297 (62%), Positives = 231/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ V+K+TKV+VQG+TG G FHT+Q I Y T +VGG+ P KG T G VPVF Sbjct: 1 MSVFVNKDTKVIVQGITGSQGLFHTKQMIEY-GTNIVGGVTPGKGGTEVEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA ERT ANASVIYVPP+ A DAI+E+++A + L+VCITEGIPVLDMV+VK +E Sbjct: 56 TVSEAVERTGANASVIYVPPAFAADAIMEAVDAGLDLVVCITEGIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +Q G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDEETYAVIMIGEIGGTAEEEAAEWVKAN----MTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI M E GI +A +PA IG +L+ +L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKKMTECGIKVAETPAVIGETLISVL 288 >gi|168026667|ref|XP_001765853.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683030|gb|EDQ69444.1| predicted protein [Physcomitrella patens subsp. patens] Length = 324 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 185/297 (62%), Positives = 232/297 (78%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF T Sbjct: 30 AVFVDKTTRVICQGITGKNGTFHTEQAIDY-GTNMVGGVTPKKGGTEHLG----LPVFNT 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 VAEAK+ T ANASVIYVP S A +AI+E+++AE+ L+VCITEGIP DMV+VK A L++S Sbjct: 85 VAEAKKETKANASVIYVPASLAANAILEALDAELDLVVCITEGIPQHDMVKVKSALLQQS 144 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 145 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTC 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE IV++GEIGGSAEE+AA F+++ G +KP+V Sbjct: 205 VGIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGSAEEDAAAFIRES---GTQKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKG A DKINA++ AG+ + SPA+IG +++++ Sbjct: 262 SFIAGLTAPPGRRMGHAGAIISGGKGTATDKINALRAAGVTVCESPAQIGATMLKVF 318 >gi|218288279|ref|ZP_03492578.1| succinyl-CoA synthetase, alpha subunit [Alicyclobacillus acidocaldarius LAA1] gi|218241638|gb|EED08811.1| succinyl-CoA synthetase, alpha subunit [Alicyclobacillus acidocaldarius LAA1] Length = 299 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 181/297 (60%), Positives = 229/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K T+V+ QG+TG AG FHT+QA+ Y T+VVGG P KG T G +PVF Sbjct: 1 MSILVNKETRVITQGITGSAGLFHTQQALAY-GTKVVGGTSPGKGGTKVEG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T ANASVIYVPP+ A DAI+E++ A + L+VCITEGIP+ DMV+VK +E Sbjct: 56 TVEEAVRETGANASVIYVPPAFAADAIMEAVAAGLELVVCITEGIPIFDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I G +G++SRSGTLTYEAV+Q +Q GLGQSTA Sbjct: 116 KTRLIGPNCPGVITPNECKIGIMPGYIHTPGKIGVVSRSGTLTYEAVYQLTQLGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+DVL++F D TE+++M+GEIGGSAEEEAA+++K KKP+V Sbjct: 176 VGIGGDPVNGTNFVDVLKMFNDDPDTEAVIMIGEIGGSAEEEAAEWIKAN----MKKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPGR MGHAGA++SGG G A+ KI MKE GI +AP+P+ +G +L ++L Sbjct: 232 GFIAGATAPPGRRMGHAGAIVSGGSGTAQSKIEKMKECGIRVAPTPSEMGSTLYQVL 288 >gi|258511358|ref|YP_003184792.1| succinyl-CoA synthetase, alpha subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478084|gb|ACV58403.1| succinyl-CoA synthetase, alpha subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 299 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 182/297 (61%), Positives = 229/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K T+V+ QG+TG AG FHT+QA+ Y T+VVGG P KG T G +PVF Sbjct: 1 MSILVNKETRVITQGITGSAGLFHTQQALAY-GTKVVGGTSPGKGGTKVEG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T ANASVIYVPP+ A DAI+E++ A I L+VCITEGIP+LDMV+VK +E Sbjct: 56 TVEEAVRETGANASVIYVPPAFAADAIMEAVAAGIELVVCITEGIPILDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I G +G++SRSGTLTYEAV+Q +Q GLGQSTA Sbjct: 116 KTRLIGPNCPGVITPNECKIGIMPGYIHTPGKIGVVSRSGTLTYEAVYQLTQLGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+DVL++F D TE+++M+GEIGGSAEEEAA+++K KKP+V Sbjct: 176 VGIGGDPVNGTNFVDVLKMFNDDPDTEAVIMIGEIGGSAEEEAAEWIKAN----MKKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPGR MGHAGA++SGG G A+ KI MK GI +AP+P+ +G +L ++L Sbjct: 232 GFIAGATAPPGRRMGHAGAIVSGGSGTAQSKIEKMKACGIRVAPTPSEMGSTLYQVL 288 >gi|226486592|emb|CAX74373.1| succinate-CoA ligase [Schistosoma japonicum] gi|226486594|emb|CAX74374.1| succinate-CoA ligase [Schistosoma japonicum] Length = 324 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 180/300 (60%), Positives = 233/300 (77%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +IL+D+NTK++ QG TGK GTFH++Q + Y T++VGG+ P KG + G +PVF + Sbjct: 27 NILLDENTKLICQGFTGKQGTFHSQQTLAY-GTKLVGGVSPGKGGSVHLG----LPVFNS 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAK+ T A A+VIYVPP A AI E+I+AEIPLIVCITEGIP DM+RV+ RL E+S Sbjct: 82 VKEAKDATGATATVIYVPPPHAATAIYEAIDAEIPLIVCITEGIPQHDMIRVRKRLTEQS 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ PD CKIGIMP I + G+VGI+SRSGTLTYEAVFQT+Q GLGQS Sbjct: 142 VSRLIGPNCPGIIKPDVCKIGIMPAHIHKPGTVGIVSRSGTLTYEAVFQTTQVGLGQSLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID L++FL D T+SI+++GEIGG +EE+AA+FLK + KP+V Sbjct: 202 VGIGGDPFNGTDFIDCLQVFLNDPNTKSIILLGEIGGESEEKAAEFLKQHNVGPKHKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPGR MGHAGA+IS GKGGA++K+ A++ AG+ + PSPA++G +L++ + L Sbjct: 262 SFIAGVTAPPGRRMGHAGAIISLGKGGAKEKMAALESAGVVVTPSPAKLGTTLLKAIADL 321 >gi|76156042|gb|AAX27280.2| SJCHGC04909 protein [Schistosoma japonicum] Length = 320 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 180/300 (60%), Positives = 233/300 (77%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +IL+D+NTK++ QG TGK GTFH++Q + Y T++VGG+ P KG + G +PVF + Sbjct: 23 NILLDENTKLICQGFTGKQGTFHSQQTLAY-GTKLVGGVSPGKGGSVHLG----LPVFNS 77 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAK+ T A A+VIYVPP A AI E+I+AEIPLIVCITEGIP DM+RV+ RL E+S Sbjct: 78 VKEAKDATGATATVIYVPPPHAATAIYEAIDAEIPLIVCITEGIPQHDMIRVRKRLTEQS 137 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ PD CKIGIMP I + G+VGI+SRSGTLTYEAVFQT+Q GLGQS Sbjct: 138 VSRLIGPNCPGIIKPDVCKIGIMPAHIHKPGTVGIVSRSGTLTYEAVFQTTQVGLGQSLC 197 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID L++FL D T+SI+++GEIGG +EE+AA+FLK + KP+V Sbjct: 198 VGIGGDPFNGTDFIDCLQVFLNDPNTKSIILLGEIGGESEEKAAEFLKQHNVGPKHKPVV 257 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPGR MGHAGA+IS GKGGA++K+ A++ AG+ + PSPA++G +L++ + L Sbjct: 258 SFIAGVTAPPGRRMGHAGAIISLGKGGAKEKMAALESAGVVVTPSPAKLGTTLLKAIADL 317 >gi|157964515|ref|YP_001499339.1| succinyl-CoA synthetase subunit alpha [Rickettsia massiliae MTU5] gi|157844291|gb|ABV84792.1| Succinyl-CoA synthetase alpha chain [Rickettsia massiliae MTU5] Length = 292 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 178/297 (59%), Positives = 235/297 (79%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K T+V+ QG TG GTFH+EQAI Y T +VGG+ P KG ++++PV+ Sbjct: 1 MAILINKKTQVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGHT----HLDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+A+I ++VCITEGIPVLDMV+VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAKIEVVVCITEGIPVLDMVKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +E+FL D+ T++I+M+GEIGG+AEE+AA+F+K KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDAAEFIKQSK---IKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPG+ MGHAGA+I+GG G A+DK+ A++ AG+ I SPA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIAGGTGSAKDKLEALQSAGVTITRSPADIGKTMLDLL 289 >gi|118486457|gb|ABK95068.1| unknown [Populus trichocarpa] Length = 331 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 183/296 (61%), Positives = 231/296 (78%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF +V Sbjct: 37 VFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNSV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 +EAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMVRVKA ++K + Sbjct: 92 SEAKAETKANASVIYVPPPFAAAAILEAVEAELDLVVCITEGIPQHDMVRVKAAIKKQTK 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G VGI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 152 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCV 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D +E FLAD TE IV++GEIGG+AEE+AA +K+ G +KP+V Sbjct: 212 GIGGDPFNGTNFVDCVEKFLADPQTEGIVLIGEIGGTAEEDAATLIKES---GTEKPVVA 268 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DKI +++AG+ + SPA+IG +++++ Sbjct: 269 FIAGVTAPPGRRMGHAGAIVSGGKGTAQDKIKTLRDAGVIVVESPAKIGTAMLDVF 324 >gi|83313058|ref|YP_423322.1| succinyl-CoA synthetase subunit alpha [Magnetospirillum magneticum AMB-1] gi|82947899|dbj|BAE52763.1| Succinyl-CoA synthetase [Magnetospirillum magneticum AMB-1] Length = 291 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 183/297 (61%), Positives = 229/297 (77%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+ NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T ++++PVF Sbjct: 1 MAVLVNSNTKVICQGFTGAQGTFHSEQAIAY-GTKMVGGVTPGKGGTT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK +T NASVIYVPP A DAI+E+I+AEI L VCITEGIPV DM+ VK L+ S Sbjct: 56 TVAEAKAKTGCNASVIYVPPPFAADAILEAIDAEIELAVCITEGIPVADMLAVKRALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I +G +GI+SRSGTLTYEAV QT+ GLGQ+T Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHMRGKIGIVSRSGTLTYEAVAQTTATGLGQTTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT F+D LELFLAD T++I+M+GEIGG AE + A+ LK + KKP V Sbjct: 176 IGIGGDPINGTNFVDSLELFLADPETQAIIMIGEIGGDAEVQGAELLK---RSKIKKPTV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGAVISGG A+ K+ A+K AGI +A SPA +G ++V+LL Sbjct: 233 GFIAGRTAPPGRRMGHAGAVISGGNDTADFKVEALKSAGIAVADSPASLGSTMVKLL 289 >gi|262277899|ref|ZP_06055692.1| succinyl-CoA ligase (ADP-forming) subunit alpha [alpha proteobacterium HIMB114] gi|262225002|gb|EEY75461.1| succinyl-CoA ligase (ADP-forming) subunit alpha [alpha proteobacterium HIMB114] Length = 291 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 194/297 (65%), Positives = 237/297 (79%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TK++ QG TG GTFH+EQA+ Y T +VGG+ PKKG G PVF Sbjct: 1 MSVLVNKDTKLICQGFTGANGTFHSEQALAY-GTNLVGGVTPKKGGQVHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A+A++IYVP A AIIE+I+A+IPLIVCITEGIP+LDM++VK +L+ S Sbjct: 56 TVKEAVDETRADATMIYVPAKFAASAIIEAIDAKIPLIVCITEGIPILDMIKVKEKLQDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPGI+TPD CKIGIMPG I +KG+VGI+SRSGTLTYEAV QT+ EGLGQST Sbjct: 116 NSRLIGPNCPGIITPDECKIGIMPGHIHKKGTVGIVSRSGTLTYEAVAQTTAEGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT FID L+LFL DE TESI+M+GEIGGSAEEEAA+FLK+ + KKP V Sbjct: 176 IGIGGDPVNGTNFIDCLDLFLKDEKTESIIMIGEIGGSAEEEAAEFLKNNS---IKKPTV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPGR MGHAGA+I+GGKGGA+DKI M+ GI + SPA IG++L +L Sbjct: 233 GFIAGITAPPGRRMGHAGAIIAGGKGGAKDKIKTMQSCGITVTDSPADIGKTLKSVL 289 >gi|15604297|ref|NP_220813.1| succinyl-CoA synthetase subunit alpha [Rickettsia prowazekii str. Madrid E] gi|3915042|sp|O08371|SUCD_RICPR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|2073501|emb|CAA72446.1| succinyl-CoA synthetase alpha-subunit [Rickettsia prowazekii] gi|3860989|emb|CAA14889.1| SUCCINYL-COA LIGASE (sucD) [Rickettsia prowazekii] Length = 292 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 180/300 (60%), Positives = 232/300 (77%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K TKV+ QG TG GTFH+EQAI Y T +VGG+ P KG ++N+PV+ Sbjct: 1 MAILINKKTKVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGHT----HLNLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+A+I ++VCITEGIPVLDM++VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAKIEVVVCITEGIPVLDMIKVKRALIGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKIGDIGIVSRSGTLTYEAVAQTTAAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +E+FL D+ T++I+M+GEIGGSAEE+AA F+K + KKPIV Sbjct: 176 VGIGGDPVNGTSFVDCIEMFLQDDETKAIIMIGEIGGSAEEDAADFIK---QSKIKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAP + MGHAGA+ISGGKG AEDK+ ++ AG+ I SPA IG+++++LL + Sbjct: 233 SFIAGITAPADKRMGHAGAIISGGKGSAEDKVEVLQSAGVIITRSPADIGKTMLDLLNKI 292 >gi|23014367|ref|ZP_00054187.1| COG0074: Succinyl-CoA synthetase, alpha subunit [Magnetospirillum magnetotacticum MS-1] Length = 291 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 184/297 (61%), Positives = 229/297 (77%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+ NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T ++++PVF Sbjct: 1 MAVLVNANTKVICQGFTGAQGTFHSEQAIAY-GTKMVGGVTPGKGGTT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK +T NASVIYVPP A DAI+E+I+AEI L VCITEGIPV DM+ VK L+ S Sbjct: 56 TVAEAKAKTGCNASVIYVPPPFAADAILEAIDAEIELAVCITEGIPVADMLAVKRALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I +G VGI+SRSGTLTYEAV QT+ GLGQ+T Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHLRGKVGIVSRSGTLTYEAVAQTTATGLGQTTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT F+D LELFLAD T++I+M+GEIGG AE + A+ LK + KKP V Sbjct: 176 IGIGGDPINGTNFVDSLELFLADPETQAIIMIGEIGGDAEVQGAELLK---RSKIKKPTV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGAVISGG A+ K+ A+K AGI +A SPA +G ++V+LL Sbjct: 233 GFIAGRTAPPGRRMGHAGAVISGGNDTADFKVEALKSAGIAVADSPASLGSTMVKLL 289 >gi|86138988|ref|ZP_01057559.1| succinyl-CoA synthase, alpha subunit [Roseobacter sp. MED193] gi|85824219|gb|EAQ44423.1| succinyl-CoA synthase, alpha subunit [Roseobacter sp. MED193] Length = 294 Score = 362 bits (930), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 196/297 (65%), Positives = 248/297 (83%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG ++N+PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQS----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++V+ LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVQRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQS+A Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDIGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVL+LFL D+ TESI+M+GEIGGSAEEEAA+FL ++ K+GR KP+ Sbjct: 176 VGIGGDPIKGTEHIDVLDLFLDDDETESIIMIGEIGGSAEEEAAEFLAEQKKKGRWKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AM+ AGI +A SPA +G ++++ + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMRSAGIVVAESPAGLGEAVLKAI 292 >gi|149183633|ref|ZP_01862050.1| succinyl-CoA synthetase subunit alpha [Bacillus sp. SG-1] gi|148848650|gb|EDL62883.1| succinyl-CoA synthetase subunit alpha [Bacillus sp. SG-1] Length = 300 Score = 362 bits (930), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 179/297 (60%), Positives = 230/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+TKV+VQG+TG FHT+Q + Y TQ+V G+ P KG T G VPVF Sbjct: 1 MSVFINKDTKVIVQGITGSTALFHTKQMLEY-GTQIVAGVTPGKGGTEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK+ T ANASVIYVP A DAI+E+++AE+ L +CITE IPVLDMV+VK +E Sbjct: 56 TVEEAKKETGANASVIYVPAPFAADAILEAVDAELDLAICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I KG VG++SRSGTLTYEAV Q SQEG+GQSTA Sbjct: 116 KTRLVGPNCPGVITPDECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLSQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FIDVL+ F DE T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTDFIDVLKAFNEDEDTYAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI M E GI +AP+P+ +G +L+++L Sbjct: 232 GFIGGRTAPPGKRMGHAGAIISGGKGTADEKIRVMNECGIEVAPTPSDMGETLIKVL 288 >gi|254455553|ref|ZP_05068982.1| succinyl-CoA synthetase alpha chain [Candidatus Pelagibacter sp. HTCC7211] gi|207082555|gb|EDZ59981.1| succinyl-CoA synthetase alpha chain [Candidatus Pelagibacter sp. HTCC7211] Length = 291 Score = 362 bits (929), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 194/299 (64%), Positives = 237/299 (79%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+ QG TG GTFH+EQAI Y T +VGG+ PKKG ++ PVF Sbjct: 1 MSILVNKNTKVICQGFTGAHGTFHSEQAIKY-GTNLVGGVTPKKGGQK----HLYRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK+ A+A++IYVP A AIIE+I+A I LIVCITEGIPV DM++V+ +L S Sbjct: 56 SVIEAKDSVGADATMIYVPAKFAAAAIIEAIDASIELIVCITEGIPVQDMLKVRQKLNGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TPD CKIGIMPG+I ++GSVGI+SRSGTLTYEAV QT++ GLGQST Sbjct: 116 KSRLIGPNCPGIITPDECKIGIMPGNIHKRGSVGIVSRSGTLTYEAVAQTTENGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT FID L+LFL DE T+SI+M+GEIGG+AEEEAA+F+K+ KKPIV Sbjct: 176 IGIGGDPVNGTNFIDCLDLFLNDEETKSILMIGEIGGTAEEEAAEFVKNHK---IKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKGGAEDKI M+E+GI +A SP+ IG++L L + Sbjct: 233 GFIAGITAPPGRRMGHAGAIISGGKGGAEDKIKKMEESGITVAKSPSIIGKTLFNKLSN 291 >gi|34580487|ref|ZP_00141967.1| succinyl-CoA synthetase alpha chain [Rickettsia sibirica 246] gi|28261872|gb|EAA25376.1| succinyl-CoA synthetase alpha chain [Rickettsia sibirica 246] Length = 292 Score = 362 bits (928), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 179/297 (60%), Positives = 234/297 (78%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K T+V+ QG TG GTFH+EQAI Y T +VGG+ P KG ++++PV+ Sbjct: 1 MAILINKKTQVICQGFTGLQGTFHSEQAIAY-GTNMVGGVTPGKGGHT----HLDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+AEI ++VCITEGIPVLDMV+VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMVKVKRALAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +E+FL D+ T++I+M+GEIGG+AEE+AA+F+K + KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDAAEFIK---QSKIKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPG+ MGHAGA+I G G AEDK+ A++ AG+ I SPA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIVGRTGSAEDKLEALQSAGVIITRSPADIGKTMLDLL 289 >gi|326489921|dbj|BAJ94034.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326516512|dbj|BAJ92411.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326517002|dbj|BAJ96493.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 329 Score = 361 bits (927), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 182/296 (61%), Positives = 228/296 (77%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDK+T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF +V Sbjct: 35 VFVDKSTRVICQGITGKNGTFHTEQAIEY-GTNMVGGVTPKKGGTEHLG----LPVFNSV 89 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 AEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMV+VKA L + S Sbjct: 90 AEAKAETKANASVIYVPPPFAAAAIMEALEAELDLVVCITEGIPQHDMVKVKAALNRQSK 149 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 150 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCV 209 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G+GGDP GT F+D LE F+ D TE IV++GEIGG+AEE+AA F+++ +KP+V Sbjct: 210 GMGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGTAEEDAAAFIRESKT---EKPVVA 266 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DKI A++EAG+ + SPA+IG ++ E+ Sbjct: 267 FIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIF 322 >gi|195620062|gb|ACG31861.1| succinyl-CoA ligase alpha-chain 2 [Zea mays] Length = 320 Score = 361 bits (926), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 183/296 (61%), Positives = 228/296 (77%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDK+T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF +V Sbjct: 26 VFVDKSTRVICQGITGKNGTFHTEQAIEY-GTNMVGGVTPKKGGTEHLG----LPVFNSV 80 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 AEAK T ANASVIYVPP A AI+ES+EAE+ L+VCITEGIP DMV+VKA L + S Sbjct: 81 AEAKAETKANASVIYVPPPFAAAAIMESMEAELDLVVCITEGIPQHDMVKVKAALNRQSK 140 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 141 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCV 200 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D LE F+ D TE IV++GEIGG+AEE+AA F+++ +KP+V Sbjct: 201 GIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGTAEEDAATFIQESKT---QKPVVA 257 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+++GGKG A+DKI A++EAG+ + SPA+IG ++ E+ Sbjct: 258 FIAGLTAPPGRRMGHAGAIVAGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIF 313 >gi|224083892|ref|XP_002307162.1| predicted protein [Populus trichocarpa] gi|222856611|gb|EEE94158.1| predicted protein [Populus trichocarpa] Length = 298 Score = 361 bits (926), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 182/297 (61%), Positives = 232/297 (78%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF + Sbjct: 3 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNS 57 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V+EAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMVRVKA ++K + Sbjct: 58 VSEAKAETKANASVIYVPPPFAAAAILEAVEAELDLVVCITEGIPQHDMVRVKAAIKKQT 117 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G VGI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 118 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D ++ FLAD TE IV++GEIGG+AEE+AA +K+ G +KP+V Sbjct: 178 VGIGGDPFNGTNFVDCVKKFLADPQTEGIVLIGEIGGTAEEDAATLIKES---GTEKPVV 234 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DKI +++AG+ + SPA+IG +++++ Sbjct: 235 AFIAGVTAPPGRRMGHAGAIVSGGKGTAQDKIKTLRDAGVIVVESPAKIGTAMLDVF 291 >gi|15892521|ref|NP_360235.1| succinyl-CoA synthetase subunit alpha [Rickettsia conorii str. Malish 7] gi|81528265|sp|Q92I22|SUCD_RICCN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|15619681|gb|AAL03136.1| succinyl-CoA synthetase alpha chain [Rickettsia conorii str. Malish 7] Length = 292 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 178/297 (59%), Positives = 234/297 (78%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K T+V+ QG TG GTFH+EQAI Y T +VGG+ P KG ++++PV+ Sbjct: 1 MAILINKKTQVICQGFTGLQGTFHSEQAIAY-GTNMVGGVTPGKGGHT----HLDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+AEI ++VCITEGIPVLDMV+VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMVKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT F+D +E+FL D+ T++I+M+GEIGG+AEE+AA+F+K + KKPIV Sbjct: 176 IGIGGDPVNGTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDAAEFIK---QSKIKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPG+ MGHAGA+I G G AEDK+ A++ AG+ I SPA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIVGRTGSAEDKLEALQSAGVIITRSPADIGKTMLDLL 289 >gi|186473505|ref|YP_001860847.1| succinyl-CoA synthetase, alpha subunit [Burkholderia phymatum STM815] gi|184195837|gb|ACC73801.1| succinyl-CoA synthetase, alpha subunit [Burkholderia phymatum STM815] Length = 278 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 180/283 (63%), Positives = 221/283 (78%), Gaps = 8/283 (2%) Query: 15 GLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANAS 74 G TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF TVA+A T ANAS Sbjct: 3 GFTGSQGTFHSEQAVAY-GTQMVGGVTPGKGGTSHLG----LPVFDTVADAVGATGANAS 57 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILT 134 VIYVPP A DAI+E+++AE+PL+VCITEGIPV+DMVRVK L S++RLIGPNCPG++T Sbjct: 58 VIYVPPPMAADAILEAVDAELPLVVCITEGIPVIDMVRVKRALAGSATRLIGPNCPGVIT 117 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 P CKIGIMPG I R G +G++SRSGTLTYEAV QT+ GLGQ+T +GIGGDPV GT FI Sbjct: 118 PGQCKIGIMPGHIHRPGKIGVVSRSGTLTYEAVAQTTAAGLGQTTCIGIGGDPVNGTNFI 177 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM 254 D LE+FLAD+ TE ++M+GEIGGSAEE+AAQFLKD KP+VGF+AG +APPGR M Sbjct: 178 DCLEMFLADDETEGVIMIGEIGGSAEEDAAQFLKDSRT---NKPVVGFIAGTSAPPGRRM 234 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GHAGA+ISGGKG A KI+AM+ AGI +A SPA +G ++++ Sbjct: 235 GHAGAIISGGKGTAGAKIDAMRSAGIHVAQSPAALGETMLKAF 277 >gi|157828469|ref|YP_001494711.1| succinyl-CoA synthetase subunit alpha [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933187|ref|YP_001649976.1| succinyl-CoA synthetase subunit alpha [Rickettsia rickettsii str. Iowa] gi|13235367|emb|CAC33660.1| Succinyl-CoA synthetase alpha subunit [Rickettsia rickettsii] gi|157800950|gb|ABV76203.1| succinyl-CoA synthetase subunit alpha [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908274|gb|ABY72570.1| succinyl-CoA synthetase alpha chain [Rickettsia rickettsii str. Iowa] Length = 292 Score = 360 bits (924), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 178/297 (59%), Positives = 234/297 (78%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K T+V+ QG TG GTFH+EQAI Y T +VGG+ P KG ++++PV+ Sbjct: 1 MAILINKKTQVICQGFTGLQGTFHSEQAIAY-GTNMVGGVTPGKGGHT----HLDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+AEI ++VCITEGIPVLDMV+VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMVKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +E+FL D+ T++++M+GEIGG+AEE+AA+F+K + KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIEMFLKDDETKAVIMIGEIGGNAEEDAAEFIK---QSKIKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPG+ MGHAGA+I G G AEDK+ A++ AG+ I SPA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIVGRTGSAEDKLEALQSAGVVITRSPADIGKTMLDLL 289 >gi|229086388|ref|ZP_04218564.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock3-44] gi|228696904|gb|EEL49713.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock3-44] Length = 300 Score = 360 bits (924), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 180/297 (60%), Positives = 231/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTEIEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++AEI L+VCITEGIPVLDMV+VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAEIDLVVCITEGIPVLDMVKVKKYMTGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 QTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPAGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVL 288 >gi|190571355|ref|YP_001975713.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018751|ref|ZP_03334559.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357627|emb|CAQ55068.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995702|gb|EEB56342.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 293 Score = 360 bits (924), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 179/297 (60%), Positives = 231/297 (77%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+T+++ QG TG GTFH+EQAI Y T++VGG+ P KG + ++N+PVF Sbjct: 1 MSVLVNKDTRLICQGFTGAQGTFHSEQAIDY-GTKMVGGVTPGKGGST----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAKE+T ANA+VIYVP A AI+E+I+A+I LI+CITEGIP+LDMV+VK L S Sbjct: 56 TVAEAKEKTCANATVIYVPAKFAAAAILEAIDAKIELIICITEGIPILDMVKVKHALAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPG++TP+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 NSRLIGPNCPGVITPEECKIGIMPGHIHKRGHIGIMSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+D +ELFL D+ T IV++GEIGG+ EE+ + F+K E KKPIV Sbjct: 176 IGIGGDPVHGMTFVDCMELFLKDDDTHGIVVIGEIGGNEEEDVSHFVKTEKT---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GFVAG+TAPPGR MGHAGA+IS G A K+ M+ AGI IA +PA IG+ ++E++ Sbjct: 233 GFVAGQTAPPGRRMGHAGAIISSSGGSAGAKLEVMRSAGIAIAETPAVIGKKVLEVM 289 >gi|242046092|ref|XP_002460917.1| hypothetical protein SORBIDRAFT_02g037420 [Sorghum bicolor] gi|241924294|gb|EER97438.1| hypothetical protein SORBIDRAFT_02g037420 [Sorghum bicolor] Length = 332 Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 181/297 (60%), Positives = 229/297 (77%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK+T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF + Sbjct: 37 AVFVDKSTRVICQGITGKNGTFHTEQAIEY-GTNMVGGVTPKKGGTEHLG----LPVFNS 91 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 VAEAK T ANASVIYVPP A AI+E+++AE+ L+VCITEGIP DMV+VKA L + S Sbjct: 92 VAEAKAETKANASVIYVPPPFAAAAIMEAMDAELDLVVCITEGIPQHDMVKVKAALNRQS 151 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 152 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTC 211 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE IV++GEIGG+AEE+AA F+++ +KP+V Sbjct: 212 VGIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGTAEEDAATFIQESKT---QKPVV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+++GGKG A+DKI A++EAG+ + SPA+IG ++ E+ Sbjct: 269 AFIAGLTAPPGRRMGHAGAIVAGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIF 325 >gi|229586710|ref|YP_002845211.1| succinyl-CoA synthetase subunit alpha [Rickettsia africae ESF-5] gi|228021760|gb|ACP53468.1| Succinyl-CoA synthetase alpha chain [Rickettsia africae ESF-5] Length = 291 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 178/297 (59%), Positives = 234/297 (78%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K T+V+ QG TG GTFH+EQAI Y T +VGG+ P KG ++++PV+ Sbjct: 1 MAILINKKTQVICQGFTGLQGTFHSEQAIAY-GTNMVGGVTPGKGGHT----HLDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+AEI ++VCITEGIPVLDM++VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMLKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +E+FL D+ T++I+M+GEIGG+AEE+AA+F+K + KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDAAEFIK---QSKIKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPG+ MGHAGA+I G G AEDK+ A++ AG+ I SPA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIVGRTGSAEDKLEALQSAGVIITRSPADIGKTMLDLL 289 >gi|30021923|ref|NP_833554.1| succinyl-CoA synthetase subunit alpha [Bacillus cereus ATCC 14579] gi|29897479|gb|AAP10755.1| Succinyl-CoA synthetase alpha chain [Bacillus cereus ATCC 14579] Length = 300 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 181/297 (60%), Positives = 230/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTDIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++AEI L+VCITEGIPVLDMV VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAEIDLVVCITEGIPVLDMVNVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGILSRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 HTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGILSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPAGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVL 288 >gi|162148724|ref|YP_001603185.1| succinyl-CoA ligase [GDP-forming] alpha-chain [Gluconacetobacter diazotrophicus PAl 5] gi|209545509|ref|YP_002277738.1| succinyl-CoA synthetase subunit alpha [Gluconacetobacter diazotrophicus PAl 5] gi|161787301|emb|CAP56895.1| putative Succinyl-CoA ligase [GDP-forming] alpha-chain [Gluconacetobacter diazotrophicus PAl 5] gi|209533186|gb|ACI53123.1| succinyl-CoA synthetase, alpha subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 293 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 182/297 (61%), Positives = 230/297 (77%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV + T+V+ QG TG GTFH+EQA+ Y T++VGG+ P +G G +PVF Sbjct: 1 MSILVHRGTRVITQGFTGAQGTFHSEQALAY-GTRLVGGVTPGRGGAVHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A+E T A+A+V+YVPP GA DAI+E+I A +PLIVCITEGIPVLDMVRV L +S Sbjct: 56 TVSQAREATGADATVLYVPPDGAADAILEAIAAGMPLIVCITEGIPVLDMVRVHQVLARS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++TP CKIGIMPG+I R G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 DSVLIGPNCPGVITPGECKIGIMPGAIHRPGRVGIVSRSGTLTYEAVAQTTAAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKG +F DVL+ F+AD T+SI+M+GEIGG++E EAA ++D G KKP+V Sbjct: 176 VGIGGDPVKGLDFTDVLKRFIADPDTDSIIMIGEIGGTSEIEAAALIRDS---GTKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPGR MGHAGAVI+GG A KI+A++ AGI ++ SPA +G +L+E++ Sbjct: 233 GFIAGATAPPGRRMGHAGAVITGGHETAGAKIDALRAAGIHVSISPALLGHTLLEVM 289 >gi|118479057|ref|YP_896208.1| succinyl-CoA synthetase subunit alpha [Bacillus thuringiensis str. Al Hakam] gi|196047753|ref|ZP_03114949.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus 03BB108] gi|118418282|gb|ABK86701.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Bacillus thuringiensis str. Al Hakam] gi|196021412|gb|EDX60123.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus 03BB108] Length = 300 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 180/297 (60%), Positives = 231/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTDIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++AEI L+VCITEGIPVLDMV VK ++ Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAEIDLVVCITEGIPVLDMVNVKRYMDGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 HTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPAGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVL 288 >gi|326513084|dbj|BAK03449.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 329 Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 181/296 (61%), Positives = 227/296 (76%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDK+T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF +V Sbjct: 35 VFVDKSTRVICQGITGKNGTFHTEQAIEY-GTNMVGGVTPKKGGTEHLG----LPVFNSV 89 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 AEAK T ANASVIYVPP A I+E++EAE+ L+VCITEGIP DMV+VKA L + S Sbjct: 90 AEAKAETKANASVIYVPPPFAAATIMEALEAELDLVVCITEGIPQHDMVKVKAALNRQSK 149 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 150 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCV 209 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G+GGDP GT F+D LE F+ D TE IV++GEIGG+AEE+AA F+++ +KP+V Sbjct: 210 GMGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGTAEEDAAAFIRESKT---EKPVVA 266 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DKI A++EAG+ + SPA+IG ++ E+ Sbjct: 267 FIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIF 322 >gi|228992563|ref|ZP_04152490.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus pseudomycoides DSM 12442] gi|228998611|ref|ZP_04158198.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus mycoides Rock3-17] gi|229006111|ref|ZP_04163799.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus mycoides Rock1-4] gi|228755187|gb|EEM04544.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus mycoides Rock1-4] gi|228761079|gb|EEM10038.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus mycoides Rock3-17] gi|228767197|gb|EEM15833.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus pseudomycoides DSM 12442] Length = 300 Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 180/297 (60%), Positives = 231/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTEIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++AEI L+VCITEGIPVLDMV+VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAEIDLVVCITEGIPVLDMVKVKKYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 QTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPAGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLIAVL 288 >gi|301055325|ref|YP_003793536.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis CI] gi|300377494|gb|ADK06398.1| succinyl-CoA synthetase alpha subunit [Bacillus cereus biovar anthracis str. CI] Length = 300 Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 180/297 (60%), Positives = 231/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTDIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++AEI L+VCITEGIPVLDMV VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAEIDLVVCITEGIPVLDMVNVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 HTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L++F DE T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKVFNEDEETHAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPAGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVL 288 >gi|51473621|ref|YP_067378.1| succinyl-CoA synthetase subunit alpha [Rickettsia typhi str. Wilmington] gi|81636362|sp|Q9AKE1|SUCD_RICTY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|13235359|emb|CAC33725.1| Succinyl-CoA synthetase alpha subunit [Rickettsia typhi] gi|51459933|gb|AAU03896.1| Succinate thiokinase [Rickettsia typhi str. Wilmington] Length = 292 Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 178/300 (59%), Positives = 233/300 (77%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K TKV+ QG TG GTFH+EQAI Y T +VGG+ P KG ++N+PV+ Sbjct: 1 MAILINKKTKVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGHT----HLNLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+A+I ++VCITEGIPVLDMV+VK L S Sbjct: 56 TVHEAKAKTDANASVIYVPPGFAADSILEAIDAKIEVVVCITEGIPVLDMVKVKRALIGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKTGIIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT F++ +E+FL D+ T++I+M+GEIGG+AEE+AA F+K + KKPIV Sbjct: 176 IGIGGDPVNGTSFVECIEMFLQDDETKAIIMIGEIGGNAEEDAADFIK---QSKIKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAP + MGHAGA+ISGGKG A+DK+ A++ AG+ I SPA IG+++++LL + Sbjct: 233 SFIAGITAPSDKRMGHAGAIISGGKGSAKDKLEALQSAGVTITKSPADIGKTMLDLLNKI 292 >gi|288553076|ref|YP_003425011.1| succinyl-CoA synthetase subunit alpha [Bacillus pseudofirmus OF4] gi|288544236|gb|ADC48119.1| succinyl-CoA synthetase subunit alpha [Bacillus pseudofirmus OF4] Length = 304 Score = 358 bits (920), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 179/297 (60%), Positives = 231/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+VQG+TG G FHT+QAI Y TQ+VGG+ P KG T G VPVF Sbjct: 1 MSILINKDTKVIVQGITGATGLFHTQQAIEY-GTQIVGGVTPGKGGTEVEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASVIYVPP+ A DAI+E+++AE+ L +CITEGIPV+DMV V+ +E Sbjct: 56 TVEDAVKATGANASVIYVPPAFAADAIMEAVDAELDLAICITEGIPVMDMVSVRRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSTNGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELF D T +++M+GEIGG+AEEEAA+++ K KKP+V Sbjct: 176 VGIGGDPVNGTNFIDVLELFNEDPETYAVIMIGEIGGTAEEEAAEWI----KANMKKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI ++ G+ +A +P+ +G +L++ L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKTLESCGVKVAETPSVMGETLIKAL 288 >gi|294500950|ref|YP_003564650.1| succinate-CoA ligase subunit alpha [Bacillus megaterium QM B1551] gi|295706296|ref|YP_003599371.1| succinate-CoA ligase subunit alpha [Bacillus megaterium DSM 319] gi|294350887|gb|ADE71216.1| succinate-CoA ligase, alpha subunit [Bacillus megaterium QM B1551] gi|294803955|gb|ADF41021.1| succinate-CoA ligase, alpha subunit [Bacillus megaterium DSM 319] Length = 300 Score = 358 bits (920), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 233/297 (78%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++++TKV+VQG+TG G FHT+Q + Y T++VGG+ P KG G VPVF Sbjct: 1 MSVFINQDTKVIVQGITGGVGLFHTQQMLEY-GTKIVGGVTPGKGGLEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAKE+T A ASV+YVPP+ A D+IIE+++A++ L++CITEGIPVLDMV+VK +E Sbjct: 56 TVAEAKEKTGATASVVYVPPAFAADSIIEAVDADLDLVICITEGIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S+ G+GQSTA Sbjct: 116 RTRLVGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDEDTYAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI M E GI +A +P+ +G +L+++L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTASEKIKTMNECGIQVAETPSVMGETLIKVL 288 >gi|254361865|ref|ZP_04977999.1| succinate--CoA ligase (ADP-forming) [Mannheimia haemolytica PHL213] gi|261492659|ref|ZP_05989212.1| succinyl-CoA synthetase alpha subunit [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494592|ref|ZP_05991073.1| succinyl-CoA synthetase alpha subunit [Mannheimia haemolytica serotype A2 str. OVINE] gi|153093404|gb|EDN74395.1| succinate--CoA ligase (ADP-forming) [Mannheimia haemolytica PHL213] gi|261309704|gb|EEY10926.1| succinyl-CoA synthetase alpha subunit [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311818|gb|EEY12968.1| succinyl-CoA synthetase alpha subunit [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 289 Score = 358 bits (920), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 182/298 (61%), Positives = 228/298 (76%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP G DAI+E+I+A I LIVCITEGIP LDM++VK RL ++ Sbjct: 56 TVREAVEATGATATVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMLQVKQRLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG+I +KG++GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGNIHKKGNIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQDDPETEAIVMIGEIGGSAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K +++AG+ S A IG +L ++LG Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFKILEDAGVTTVRSLAEIGSALRKILG 289 >gi|30263838|ref|NP_846215.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis str. Ames] gi|42782927|ref|NP_980174.1| succinyl-CoA synthetase subunit alpha [Bacillus cereus ATCC 10987] gi|47529263|ref|YP_020612.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis str. 'Ames Ancestor'] gi|47570336|ref|ZP_00240981.1| succinyl-CoA synthetase alpha chain [Bacillus cereus G9241] gi|49186685|ref|YP_029937.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis str. Sterne] gi|49479151|ref|YP_037896.1| succinyl-CoA synthetase subunit alpha [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141653|ref|YP_085176.1| succinyl-CoA synthetase subunit alpha [Bacillus cereus E33L] gi|65321162|ref|ZP_00394121.1| COG0074: Succinyl-CoA synthetase, alpha subunit [Bacillus anthracis str. A2012] gi|165873310|ref|ZP_02217915.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0488] gi|167642032|ref|ZP_02400262.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0193] gi|170689659|ref|ZP_02880839.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0465] gi|170709357|ref|ZP_02899771.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0389] gi|177656001|ref|ZP_02937128.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0174] gi|196042355|ref|ZP_03109626.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus NVH0597-99] gi|206972725|ref|ZP_03233661.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus AH1134] gi|217961255|ref|YP_002339823.1| succinyl-CoA synthetase subunit alpha [Bacillus cereus AH187] gi|218232394|ref|YP_002368636.1| succinyl-CoA synthetase subunit alpha [Bacillus cereus B4264] gi|218898988|ref|YP_002447399.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus G9842] gi|218904963|ref|YP_002452797.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus AH820] gi|222097280|ref|YP_002531337.1| succinyl-CoA synthetase subunit alpha [Bacillus cereus Q1] gi|225865816|ref|YP_002751194.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus 03BB102] gi|227813257|ref|YP_002813266.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. CDC 684] gi|228902338|ref|ZP_04066495.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis IBL 4222] gi|228909660|ref|ZP_04073483.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis IBL 200] gi|228916472|ref|ZP_04080038.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228922589|ref|ZP_04085889.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228928883|ref|ZP_04091915.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935149|ref|ZP_04097976.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228940923|ref|ZP_04103482.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228947554|ref|ZP_04109844.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228954111|ref|ZP_04116140.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960051|ref|ZP_04121715.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar pakistani str. T13001] gi|228966780|ref|ZP_04127824.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar sotto str. T04001] gi|228973852|ref|ZP_04134428.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980442|ref|ZP_04140752.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis Bt407] gi|228986978|ref|ZP_04147104.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229031465|ref|ZP_04187465.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH1271] gi|229047521|ref|ZP_04193111.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH676] gi|229071333|ref|ZP_04204556.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus F65185] gi|229081090|ref|ZP_04213600.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock4-2] gi|229092877|ref|ZP_04224011.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock3-42] gi|229111306|ref|ZP_04240859.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock1-15] gi|229123349|ref|ZP_04252553.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus 95/8201] gi|229129111|ref|ZP_04258084.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BDRD-Cer4] gi|229140477|ref|ZP_04269032.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BDRD-ST26] gi|229146406|ref|ZP_04274777.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BDRD-ST24] gi|229157411|ref|ZP_04285489.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus ATCC 4342] gi|229174501|ref|ZP_04302033.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus MM3] gi|229180111|ref|ZP_04307455.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus 172560W] gi|229186075|ref|ZP_04313244.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BGSC 6E1] gi|229192004|ref|ZP_04318974.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus ATCC 10876] gi|229197945|ref|ZP_04324660.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus m1293] gi|229604162|ref|YP_002868072.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0248] gi|254683458|ref|ZP_05147318.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis str. CNEVA-9066] gi|254721979|ref|ZP_05183768.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis str. A1055] gi|254735873|ref|ZP_05193579.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis str. Western North America USA6153] gi|254739602|ref|ZP_05197296.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis str. Kruger B] gi|254751204|ref|ZP_05203243.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis str. Vollum] gi|254759313|ref|ZP_05211338.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis str. Australia 94] gi|296504330|ref|YP_003666030.1| succinyl-CoA synthetase subunit alpha [Bacillus thuringiensis BMB171] gi|30258482|gb|AAP27701.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. Ames] gi|42738854|gb|AAS42782.1| succinyl-CoA synthase, alpha subunit [Bacillus cereus ATCC 10987] gi|47504411|gb|AAT33087.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|47553001|gb|EAL11407.1| succinyl-CoA synthetase alpha chain [Bacillus cereus G9241] gi|49180612|gb|AAT55988.1| succinyl-CoA synthase, alpha subunit [Bacillus anthracis str. Sterne] gi|49330707|gb|AAT61353.1| succinyl-CoA synthase, alpha subunit [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51975122|gb|AAU16672.1| succinyl-CoA synthase, alpha subunit [Bacillus cereus E33L] gi|164710948|gb|EDR16520.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0488] gi|167510012|gb|EDR85428.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0193] gi|170125731|gb|EDS94644.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0389] gi|170666383|gb|EDT17166.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0465] gi|172079900|gb|EDT65008.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0174] gi|196026811|gb|EDX65447.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus NVH0597-99] gi|206732347|gb|EDZ49533.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus AH1134] gi|217063692|gb|ACJ77942.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus AH187] gi|218160351|gb|ACK60343.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus B4264] gi|218538957|gb|ACK91355.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus AH820] gi|218545726|gb|ACK98120.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus G9842] gi|221241338|gb|ACM14048.1| succinyl-CoA synthase, alpha subunit [Bacillus cereus Q1] gi|225788869|gb|ACO29086.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus 03BB102] gi|227002998|gb|ACP12741.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. CDC 684] gi|228585524|gb|EEK43627.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus m1293] gi|228591555|gb|EEK49404.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus ATCC 10876] gi|228597251|gb|EEK54902.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BGSC 6E1] gi|228603320|gb|EEK60797.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus 172560W] gi|228609061|gb|EEK66351.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus MM3] gi|228626138|gb|EEK82887.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus ATCC 4342] gi|228637039|gb|EEK93498.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BDRD-ST24] gi|228643038|gb|EEK99314.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BDRD-ST26] gi|228654348|gb|EEL10213.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BDRD-Cer4] gi|228660125|gb|EEL15761.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus 95/8201] gi|228672082|gb|EEL27373.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock1-15] gi|228690499|gb|EEL44282.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock3-42] gi|228702134|gb|EEL54610.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock4-2] gi|228711787|gb|EEL63739.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus F65185] gi|228723768|gb|EEL75123.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH676] gi|228729754|gb|EEL80734.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH1271] gi|228772756|gb|EEM21196.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228779262|gb|EEM27519.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis Bt407] gi|228785877|gb|EEM33880.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792879|gb|EEM40437.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar sotto str. T04001] gi|228799567|gb|EEM46520.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar pakistani str. T13001] gi|228805677|gb|EEM52267.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228812074|gb|EEM58405.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228818759|gb|EEM64825.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228824514|gb|EEM70319.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830690|gb|EEM76295.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228837018|gb|EEM82359.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228843051|gb|EEM88133.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228849949|gb|EEM94780.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis IBL 200] gi|228857307|gb|EEN01810.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis IBL 4222] gi|229268570|gb|ACQ50207.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0248] gi|296325382|gb|ADH08310.1| succinyl-CoA synthetase subunit alpha [Bacillus thuringiensis BMB171] gi|324327732|gb|ADY22992.1| succinyl-CoA synthetase subunit alpha [Bacillus thuringiensis serovar finitimus YBT-020] gi|326941604|gb|AEA17500.1| succinyl-CoA synthetase subunit alpha [Bacillus thuringiensis serovar chinensis CT-43] Length = 300 Score = 358 bits (920), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 180/297 (60%), Positives = 230/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTDIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++AEI L+VCITEGIPVLDMV VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAEIDLVVCITEGIPVLDMVNVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 HTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPAGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVL 288 >gi|58584776|ref|YP_198349.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419092|gb|AAW71107.1| Succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 295 Score = 358 bits (920), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 181/297 (60%), Positives = 227/297 (76%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV K+T+++ QG TG GTFH+EQAI Y T++VGG+ P KG + ++N+PVF Sbjct: 1 MSVLVGKDTRLICQGFTGAQGTFHSEQAISY-GTKMVGGVTPGKGGS----SHLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAKE+T ANA+VIYVP A AI+E+I+AEI LIVCITEGIP+LDMVRVK L S Sbjct: 56 TVAEAKEKTDANATVIYVPAKFAAAAILEAIDAEIELIVCITEGIPILDMVRVKHALISS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 KSRLIGPNCPGIITPEECKIGIMPGHIHKRGHIGIMSRSGTLTYEAVAQTTAVGPGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G F+D +ELFL DE T IV++GEIGG+ EE+ + F+K E KKPIV Sbjct: 176 IGIGGDPIHGMTFVDCMELFLKDEDTHGIVVIGEIGGNEEEDVSHFVKTEKT---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+IS G A K+ M AGI IA +PA IG+ ++E++ Sbjct: 233 GFIAGQTAPPGRRMGHAGAIISSSGGSAGAKLEVMSSAGIAIAETPAMIGKKILEVM 289 >gi|225677210|ref|ZP_03788203.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590734|gb|EEH11968.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 291 Score = 358 bits (920), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 180/297 (60%), Positives = 230/297 (77%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+T+++ QG TG GTFH+EQAI Y T++VGG+ P KG + ++N+PVF Sbjct: 1 MSVLVNKDTRLICQGFTGAQGTFHSEQAIDY-GTKMVGGVTPGKGGST----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAKE+T ANA+VIYVP A AI+E+I+A+I LI+CITEGIP+LDMV+VK L S Sbjct: 56 TVAEAKEKTGANATVIYVPAKFAAAAILEAIDAKIELIICITEGIPILDMVKVKRALIGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRLIGPNCPGIITPEECKIGIMPGHIHKRGHIGIMSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+D +ELFL D+ T IV++GEIGG+ EE+ + F+K E KKPIV Sbjct: 176 IGIGGDPVHGMTFVDCMELFLKDDDTHGIVVIGEIGGNEEEDVSHFVKTEKT---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GFVAG+TAPPGR MGHAGA+IS G A K+ M+ AGI IA +PA IG+ ++E++ Sbjct: 233 GFVAGQTAPPGRRMGHAGAIISSSGGSAGAKLEVMRSAGIAIAETPAVIGKKVLEVM 289 >gi|229162771|ref|ZP_04290728.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus R309803] gi|228620653|gb|EEK77522.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus R309803] Length = 300 Score = 358 bits (919), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 180/297 (60%), Positives = 230/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTDIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++AEI L+VCITEGIPVLDMV VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAEIDLVVCITEGIPVLDMVNVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 HTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPEGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVL 288 >gi|229152034|ref|ZP_04280229.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus m1550] gi|228631383|gb|EEK88017.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus m1550] Length = 300 Score = 358 bits (919), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 180/297 (60%), Positives = 229/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTDIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++AEI L+VCITEGIPVLDMV VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAEIDLVVCITEGIPVLDMVNVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 HTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L F DE T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALRAFNEDEETHAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPAGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVL 288 >gi|56964045|ref|YP_175776.1| succinyl-CoA synthetase subunit alpha [Bacillus clausii KSM-K16] gi|56910288|dbj|BAD64815.1| succinyl-CoA synthetase alpha subunit [Bacillus clausii KSM-K16] Length = 304 Score = 358 bits (919), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 179/297 (60%), Positives = 229/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+VQG+TG G FHT+QA+ Y T +VGG+ P KG T G VPVF Sbjct: 1 MSILINKDTKVIVQGITGATGLFHTKQALEY-GTNIVGGVTPGKGGTDIEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T ANASVIYVPP+ A DAI+E+ +AE+ L++CITEGIPVLDMV+VK + Sbjct: 56 TVQEAVEATGANASVIYVPPAFAADAIMEATDAELELVICITEGIPVLDMVKVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP+ CKIGIMPG I +KG +G++SRSGTLTYEAV Q S G+GQSTA Sbjct: 116 QTRLVGPNCPGVITPEECKIGIMPGYIHKKGHIGVVSRSGTLTYEAVHQLSTAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FIDVL LF D T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTDFIDVLSLFNEDPDTYAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI M+ GI +A +P+ +G +L+E L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKTMEACGIRVAATPSDMGETLIEAL 288 >gi|297808323|ref|XP_002872045.1| hypothetical protein ARALYDRAFT_489184 [Arabidopsis lyrata subsp. lyrata] gi|297317882|gb|EFH48304.1| hypothetical protein ARALYDRAFT_489184 [Arabidopsis lyrata subsp. lyrata] Length = 339 Score = 358 bits (919), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 184/297 (61%), Positives = 225/297 (75%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++V G+ PKKG T G +PVF T Sbjct: 44 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVAGVTPKKGGTEHLG----LPVFNT 98 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEAK T ANASVIYVP A AI+E + AE+ LIVCITEGIP DMVRVKA L +S Sbjct: 99 VAEAKAETKANASVIYVPAPFAAAAIMEGLAAELDLIVCITEGIPQHDMVRVKAALNSQS 158 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 159 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTC 218 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F AD TE IV++GEIGG+AEE+AA +K+ G KP+V Sbjct: 219 VGIGGDPFNGTNFVDCLEKFFADPQTEGIVLIGEIGGTAEEDAAALIKES---GTDKPVV 275 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DKI ++++AG+ + SPA+IG ++ E+ Sbjct: 276 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKSLRDAGVKVVESPAKIGAAMFEIF 332 >gi|91776240|ref|YP_545996.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methylobacillus flagellatus KT] gi|91710227|gb|ABE50155.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methylobacillus flagellatus KT] Length = 292 Score = 358 bits (918), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 180/293 (61%), Positives = 227/293 (77%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+K TKVL QG TGK GTFH+EQA+ Y TQ+VGG+ P KG ++++PVF Sbjct: 1 MAILVNKQTKVLCQGFTGKQGTFHSEQALAY-GTQMVGGVTPGKGGQR----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ A T ANASVIYVPP+ A D+I+E+ +A I LIVCITEGIPVLDM+ VKA L+ + Sbjct: 56 TMRSAVRETGANASVIYVPPAFAADSILEACDAGIELIVCITEGIPVLDMLNVKAALQAN 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPGSI +G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GARLVGPNCPGVITPDECKIGIMPGSIHLRGKVGIVSRSGTLTYEAVHQTTALGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP++G FID LELF AD TE+I+MVGEIGGS EE AA+++K KP+ Sbjct: 176 VGIGGDPIRGMNFIDCLELFEADPETEAIIMVGEIGGSDEEAAAEYIKQYV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 G++AG+TAP G+ MGHAGA+ISGG G AEDKI A+++AG+ +A SPA +G ++ Sbjct: 232 GYIAGQTAPAGKRMGHAGAIISGGSGKAEDKIRALEQAGVVVASSPAGLGEAV 284 >gi|317129220|ref|YP_004095502.1| succinyl-CoA synthetase, subunit alpha [Bacillus cellulosilyticus DSM 2522] gi|315474168|gb|ADU30771.1| succinyl-CoA synthetase, alpha subunit [Bacillus cellulosilyticus DSM 2522] Length = 301 Score = 358 bits (918), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 179/297 (60%), Positives = 232/297 (78%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI+++K+TK++VQG+TG G FHT+QAI Y T VVGG+ P KG T G VPVF Sbjct: 1 MSIMINKDTKLIVQGITGATGLFHTKQAIEY-GTNVVGGVTPGKGGTEVEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A E T ANASVIYVPP A DAI+E+ +A + L++ ITEGIPV DM++VK LE Sbjct: 56 TVSQAVEATGANASVIYVPPPFAADAIMEATDAGVELVITITEGIPVTDMIKVKRYLEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S EG+GQSTA Sbjct: 116 NTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSTEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+LF DE T +++M+GEIGG+AEEEAA+++K+ KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKLFNEDEDTYAVIMIGEIGGTAEEEAAEWIKEN----MTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI ++ AG+ +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTASEKIKTLENAGVKVAETPAVMGETLISVL 288 >gi|152976201|ref|YP_001375718.1| succinyl-CoA synthetase subunit alpha [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024953|gb|ABS22723.1| succinyl-CoA synthetase, alpha subunit [Bacillus cytotoxicus NVH 391-98] Length = 300 Score = 357 bits (917), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 180/297 (60%), Positives = 230/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGIFHTKQMIEY-GTKIVGGVTPGKGGTEIEG----VPVFH 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASVIYVPP+ A DAI+E+++AE+ L+VCITEGIPVLDMV+VK + Sbjct: 56 TVEDAVKATGANASVIYVPPAFAADAIMEAVDAELDLVVCITEGIPVLDMVKVKKYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +Q G+GQSTA Sbjct: 116 HTRLLGPNCPGIITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPAGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVL 288 >gi|15237260|ref|NP_197716.1| succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative [Arabidopsis thaliana] gi|56754629|sp|Q8LAD2|SUCA2_ARATH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha-2; Short=SCS-alpha-2; Flags: Precursor gi|10177814|dbj|BAB11180.1| succinyl-CoA synthetase, alpha subunit [Arabidopsis thaliana] gi|20260190|gb|AAM12993.1| succinyl-CoA synthetase, alpha subunit [Arabidopsis thaliana] gi|21387045|gb|AAM47926.1| succinyl-CoA synthetase alpha subunit [Arabidopsis thaliana] gi|332005758|gb|AED93141.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-2 [Arabidopsis thaliana] Length = 341 Score = 357 bits (917), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 184/297 (61%), Positives = 224/297 (75%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++V G+ PKKG T G +PVF T Sbjct: 46 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVAGVTPKKGGTEHLG----LPVFNT 100 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEAK T ANASVIYVP A AI+E + AE+ LIVCITEGIP DMVRVKA L +S Sbjct: 101 VAEAKAETKANASVIYVPAPFAAAAIMEGLAAELDLIVCITEGIPQHDMVRVKAALNSQS 160 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 161 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTC 220 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F D TE IV++GEIGG+AEE+AA +K+ G KP+V Sbjct: 221 VGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIKEN---GTDKPVV 277 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DKI ++++AG+ + SPA+IG ++ EL Sbjct: 278 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKSLRDAGVKVVESPAKIGAAMFELF 334 >gi|42521006|ref|NP_966921.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410747|gb|AAS14855.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Drosophila melanogaster] Length = 291 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 180/297 (60%), Positives = 229/297 (77%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+T+++ QG TG GTFH+EQAI Y T++VGG+ P KG + ++N+PVF Sbjct: 1 MSVLVNKDTRLICQGFTGAQGTFHSEQAIDY-GTKMVGGVTPGKGGST----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAKE+T ANA+VIYVP A AI+E+I+A+I LI+CITEGIP+LDMV+VK L S Sbjct: 56 TVAEAKEKTGANATVIYVPAKFAAAAILEAIDAKIELIICITEGIPILDMVKVKRALIGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRLIGPNCPGIITPEECKIGIMPGHIHKRGHIGIMSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+D +ELFL D T IV++GEIGG+ EE+ + F+K E KKPIV Sbjct: 176 IGIGGDPVHGITFVDCMELFLKDNDTHGIVVIGEIGGNEEEDVSHFVKTEKT---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GFVAG+TAPPGR MGHAGA+IS G A K+ M+ AGI IA +PA IG+ ++E++ Sbjct: 233 GFVAGQTAPPGRRMGHAGAIISSSGGSAGAKLEVMRSAGIAIAETPAVIGKKVLEVM 289 >gi|15241592|ref|NP_196447.1| succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative [Arabidopsis thaliana] gi|57014135|sp|P68209|SUCA1_ARATH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha-1; Short=SCS-alpha-1; Flags: Precursor gi|3660467|emb|CAA05023.1| succinyl-CoA-ligase alpha subunit [Arabidopsis thaliana] gi|10178272|emb|CAC08330.1| succinyl-CoA-ligase alpha subunit [Arabidopsis thaliana] gi|18252215|gb|AAL61940.1| succinyl-CoA-ligase alpha subunit [Arabidopsis thaliana] gi|21387057|gb|AAM47932.1| succinyl-CoA-ligase alpha subunit [Arabidopsis thaliana] gi|21536557|gb|AAM60889.1| succinyl-CoA-ligase alpha subunit [Arabidopsis thaliana] gi|332003896|gb|AED91279.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-1 [Arabidopsis thaliana] Length = 347 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 185/297 (62%), Positives = 223/297 (75%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+VL QG+TGK GTFHTEQAI Y T++V G+ PKKG T G +PVF + Sbjct: 51 AVFVDKNTRVLCQGITGKNGTFHTEQAIEY-GTKMVAGVTPKKGGTEHLG----LPVFNS 105 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEAK T ANASVIYVP A AI+E IEAE+ LIVCITEGIP DMVRVK L +S Sbjct: 106 VAEAKADTKANASVIYVPAPFAAAAIMEGIEAELDLIVCITEGIPQHDMVRVKHALNSQS 165 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 166 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTC 225 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F D TE IV++GEIGG+AEE+AA +K G +KP+V Sbjct: 226 VGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIK---ASGTEKPVV 282 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DKI ++ +AG+ + SPA+IG ++ EL Sbjct: 283 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKSLNDAGVKVVESPAKIGSAMYELF 339 >gi|189184255|ref|YP_001938040.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi str. Ikeda] gi|189181026|dbj|BAG40806.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi str. Ikeda] Length = 292 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 187/300 (62%), Positives = 237/300 (79%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVD+NTKV+ QG+TG GTFHTEQA+ Y T++VGG+ P KG +N+PV+ Sbjct: 1 MSVLVDRNTKVICQGITGAQGTFHTEQALKY-GTKMVGGVTPGKGGQTI----LNLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA ++T A ASVIYVPP+ A D+I E+I+A I L+VCITEGIPVLDM+++K L+ S Sbjct: 56 SVDEAVQKTGATASVIYVPPAFAADSIFEAIDAGIELLVCITEGIPVLDMLKIKQVLKGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TP+ CKIGIMPG I + GS+GI+SRSGTLTYEAV QT++ GLGQST Sbjct: 116 KTRLIGPNCPGIITPEQCKIGIMPGHIHKAGSIGIISRSGTLTYEAVAQTTEVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT F+D LELFLAD T++I+++GEIGGSAEEEAA FLK KKPIV Sbjct: 176 IGIGGDPINGTSFVDCLELFLADGDTKAIIIIGEIGGSAEEEAADFLKSSR---IKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG TAPPG+ MGHAGA+I G KG A K+ A+K AG+CIA SPA+IG+++ LL +L Sbjct: 233 GFIAGVTAPPGKRMGHAGAIIDGEKGAASSKLEALKSAGVCIAESPAKIGQTMYNLLHNL 292 >gi|58698203|ref|ZP_00373124.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Drosophila ananassae] gi|225630875|ref|YP_002727666.1| succinyl-CoA synthetase, alpha subunit [Wolbachia sp. wRi] gi|58535284|gb|EAL59362.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Drosophila ananassae] gi|225592856|gb|ACN95875.1| succinyl-CoA synthetase, alpha subunit [Wolbachia sp. wRi] Length = 291 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 179/297 (60%), Positives = 229/297 (77%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+T+++ QG TG GTFH+EQAI Y T++VGG+ P KG + ++N+PVF Sbjct: 1 MSVLVNKDTRLICQGFTGAQGTFHSEQAIDY-GTKMVGGVTPGKGGST----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAKE+T ANA+VIYVP A AI+E+I+A+I LI+CITEGIP+LDMV+VK L S Sbjct: 56 TVAEAKEKTGANATVIYVPAKFAAAAILEAIDAKIELIICITEGIPILDMVKVKRALIGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRLIGPNCPGIITPEECKIGIMPGHIHKRGHIGIMSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G F+D +ELFL D T IV++GEIGG+ EE+ + F+K E KKPIV Sbjct: 176 IGIGGDPIHGMTFVDCMELFLKDNDTHGIVVIGEIGGNEEEDVSHFVKAEKT---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GFVAG+TAPPGR MGHAGA+IS G A K+ M+ AGI IA +PA IG+ ++E++ Sbjct: 233 GFVAGQTAPPGRRMGHAGAIISSSGGSAGAKLEVMRSAGIAIAETPAVIGKKVLEVM 289 >gi|297806865|ref|XP_002871316.1| hypothetical protein ARALYDRAFT_487662 [Arabidopsis lyrata subsp. lyrata] gi|297317153|gb|EFH47575.1| hypothetical protein ARALYDRAFT_487662 [Arabidopsis lyrata subsp. lyrata] Length = 347 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 185/297 (62%), Positives = 223/297 (75%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+VL QG+TGK GTFHTEQAI Y T++V G+ PKKG T G +PVF + Sbjct: 51 AVFVDKNTRVLCQGITGKNGTFHTEQAIEY-GTKMVAGVTPKKGGTEHLG----LPVFNS 105 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEAK T ANASVIYVP A AI+E IEAE+ LIVCITEGIP DMVRVK L +S Sbjct: 106 VAEAKADTKANASVIYVPAPFAAAAIMEGIEAELDLIVCITEGIPQHDMVRVKHALNSQS 165 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 166 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTC 225 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F D TE IV++GEIGG+AEE+AA +K G +KP+V Sbjct: 226 VGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIK---ASGTEKPVV 282 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DKI ++ +AG+ + SPA+IG ++ EL Sbjct: 283 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKSLNDAGVKVVESPAKIGAAMYELF 339 >gi|118485015|gb|ABK94372.1| unknown [Populus trichocarpa] Length = 331 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 181/296 (61%), Positives = 230/296 (77%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF +V Sbjct: 37 VFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNSV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 +EAK T ANASVIYV P A AI+E++EAE+ L+VCITEGIP D+VRVKA ++K S Sbjct: 92 SEAKAETKANASVIYVTPPFAAAAILEAVEAELDLVVCITEGIPQHDVVRVKAAIKKQSK 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G VGI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 152 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCV 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D ++ FLAD TE IV++GEIGG+AEE+AA +K+ G +KP+V Sbjct: 212 GIGGDPFNGTNFVDCVKKFLADPQTEGIVLIGEIGGTAEEDAATIIKES---GTEKPVVA 268 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DKI +++AG+ + SPA+IG +++++ Sbjct: 269 FIAGVTAPPGRRMGHAGAIVSGGKGTAQDKIKTLRDAGVIVVESPAKIGTAMLDVF 324 >gi|229098304|ref|ZP_04229251.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock3-29] gi|229104397|ref|ZP_04235066.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock3-28] gi|229117321|ref|ZP_04246699.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock1-3] gi|228666221|gb|EEL21685.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock1-3] gi|228679095|gb|EEL33303.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock3-28] gi|228685202|gb|EEL39133.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock3-29] Length = 300 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 179/297 (60%), Positives = 230/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTDIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++A+I L+VCITEGIPVLDMV VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAKIDLVVCITEGIPVLDMVNVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 HTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPEGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVL 288 >gi|238650299|ref|YP_002916151.1| succinyl-CoA synthetase subunit alpha [Rickettsia peacockii str. Rustic] gi|238624397|gb|ACR47103.1| succinyl-CoA synthetase subunit alpha [Rickettsia peacockii str. Rustic] Length = 292 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 176/296 (59%), Positives = 233/296 (78%), Gaps = 8/296 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K T+V+ QG TG GTFH+EQAI Y T +VGG+ P KG ++++PV+ Sbjct: 1 MAILINKKTQVICQGFTGLQGTFHSEQAIAY-GTNMVGGVTPGKGGHT----HLDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+AEI ++VCITEGIPVLDM++VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMMKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +E+FL D+ T++I+M+GEIGG+AEE+AA+F+K + KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDAAEFIK---QSKIKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 F+AG TAPPG+ MGHAGA+I G G AEDK+ A++ AG+ I SPA IG++++++ Sbjct: 233 SFIAGITAPPGKRMGHAGAIIVGRTGSAEDKLEALQSAGVIITRSPADIGKTMLDV 288 >gi|148284071|ref|YP_001248161.1| succinyl-CoA synthetase, alpha chain [Orientia tsutsugamushi str. Boryong] gi|146739510|emb|CAM79216.1| succinyl-CoA synthetase, alpha chain [Orientia tsutsugamushi str. Boryong] Length = 292 Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 186/300 (62%), Positives = 237/300 (79%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVD+NTKV+ QG+TG GTFHTEQA+ Y T++VGG+ P KG +N+PV+ Sbjct: 1 MSVLVDRNTKVICQGITGAQGTFHTEQALKY-GTKMVGGVTPGKGGQTI----LNLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA ++T A ASVIYVPP+ A D+I E+I+A I L+VCITEGIPVLDM+++K L+ S Sbjct: 56 SVDEAVQKTGATASVIYVPPAFAADSIFEAIDAGIELLVCITEGIPVLDMLKIKQVLKGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TP+ CKIGIMPG I + GS+GI+SRSGTLTYEAV QT++ GLGQST Sbjct: 116 KTRLIGPNCPGIITPEQCKIGIMPGHIHKAGSIGIISRSGTLTYEAVAQTTEVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGD + GT F+D LELFLAD+ T++I+++GEIGGSAEEEAA FLK KKPIV Sbjct: 176 IGIGGDTINGTSFVDCLELFLADDDTKAIIIIGEIGGSAEEEAADFLKSSR---IKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG TAPPG+ MGHAGA+I G KG A K+ A+K AG+CIA SPA+IG+++ LL +L Sbjct: 233 GFIAGVTAPPGKRMGHAGAIIDGEKGAASSKLEALKSAGVCIAESPAKIGQTMYNLLHNL 292 >gi|148244313|ref|YP_001219007.1| succinyl-CoA synthetase alpha subunit [Candidatus Vesicomyosocius okutanii HA] gi|146326140|dbj|BAF61283.1| succinyl-CoA synthetase alpha subunit [Candidatus Vesicomyosocius okutanii HA] Length = 289 Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 226/297 (76%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNT+V+ QG TGK GTFH++Q+I+Y TQ+VGG+ P KG ++N+PVF Sbjct: 1 MSILIDKNTRVITQGFTGKQGTFHSKQSIIY-GTQIVGGVTPNKGGQR----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T EA T ANAS+IYVPP A +I+E+IE IP+I CITEGIPV DM+++KA L+KS Sbjct: 56 TTKEAINETLANASIIYVPPRFAYASILEAIETNIPVIACITEGIPVQDMLKIKAILKKS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++TPD CK+GIMPG+I + GSVG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 DSTLIGPNCPGVITPDECKLGIMPGNIHKAGSVGVISRSGTLTYEAVHQTTLVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP++G +FID L LF D T+SIVM+GEIGGS EEEAA++++ KP++ Sbjct: 176 IGIGGDPIQGMDFIDCLALFETDSQTKSIVMIGEIGGSTEEEAAEYIQSNI----SKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG P G+ MGH+GAVIS G G A DKI A+++ G+ IAP+P IG +L+E+L Sbjct: 232 SYIAGLNVPQGKRMGHSGAVISAGTGKAIDKIKALRKVGVAIAPTPTSIGETLLEIL 288 >gi|300176826|emb|CBK25395.2| Succinyl-CoA Synthetase subunit ? (SCS?) [Blastocystis hominis] Length = 318 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 183/297 (61%), Positives = 232/297 (78%), Gaps = 10/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFTT 61 + +DKNTKV+ QG+TGK GTFHT+QAI Y T++VGG++PKK GST+ + +P+F++ Sbjct: 24 VWIDKNTKVIGQGITGKNGTFHTQQAIEY-GTKMVGGVNPKKAGSTH-----LGLPIFSS 77 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EAK+ T A+A+VIYVPPSGA AI+E++ AEIPLIVCITEGIP DM+RVK ++ +S Sbjct: 78 VEEAKKATNADATVIYVPPSGAASAILEAVAAEIPLIVCITEGIPQHDMLRVKDIMKSQS 137 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P CKIGIMPG I +KG +G++SRSGTLTYEAV QT++ GLGQST Sbjct: 138 KSRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGVVSRSGTLTYEAVAQTTKYGLGQSTV 197 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID LE F D TE IVM+GEIGG+AEE+AA++LK KP+V Sbjct: 198 VGIGGDPFNGTNFIDCLERFTNDPQTEGIVMIGEIGGTAEEDAAEWLKQYGD--PSKPVV 255 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISGGKG A+ K+ AM GI + +PA+IG ++ L+ Sbjct: 256 GFIAGRTAPPGRRMGHAGAIISGGKGTAKAKMEAMTAVGIKVVDTPAQIGEAIYGLM 312 >gi|237838313|ref|XP_002368454.1| succinyl-CoA ligase alpha subunit, putative [Toxoplasma gondii ME49] gi|211966118|gb|EEB01314.1| succinyl-CoA ligase alpha subunit, putative [Toxoplasma gondii ME49] gi|221484277|gb|EEE22573.1| succinyl-CoA ligase alpha subunit, putative [Toxoplasma gondii GT1] gi|221505743|gb|EEE31388.1| succinyl-CoA ligase alpha subunit, putative [Toxoplasma gondii VEG] Length = 333 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 183/298 (61%), Positives = 229/298 (76%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHP-KKGSTYWTG-GNVNVPVFT 60 + VDKNTKV+ QGLTGK G+FHTEQ + Y TQ VGG++P KKGST+ + G ++PVF Sbjct: 33 VFVDKNTKVICQGLTGKQGSFHTEQCLAY-GTQFVGGVNPSKKGSTWQSSDGKFSLPVFG 91 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEK 119 TV EAKE T +AS+I+VPP A AI++ I EIPL VCITEGIP DMVRVK A L + Sbjct: 92 TVKEAKEATGCDASMIFVPPPFAAQAIMDCIAEEIPLAVCITEGIPQQDMVRVKQALLSQ 151 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +RLIGPNCPGI+ P CKIGIMPG I KG +G++SRSGTLTYEAV QT+Q GLGQST Sbjct: 152 NKTRLIGPNCPGIIKPGECKIGIMPGYIHAKGKIGVVSRSGTLTYEAVNQTTQTGLGQST 211 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT FID LE F+ D T+ IV++GEIGGSAEEEAA +LK+ K +KP+ Sbjct: 212 CVGIGGDPFNGTNFIDCLERFVNDPETKGIVLIGEIGGSAEEEAAAWLKEHNK--EQKPV 269 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V F+AG TAPPGR MGHAGA++SGGKG AE KI A+++AG+ + +PA +G+ ++E++ Sbjct: 270 VSFIAGLTAPPGRRMGHAGAIVSGGKGTAEGKIAALEDAGVHVVRNPAAMGQKMLEVM 327 >gi|149924785|ref|ZP_01913128.1| succinyl-CoA synthetase alpha subunit [Plesiocystis pacifica SIR-1] gi|149814342|gb|EDM73941.1| succinyl-CoA synthetase alpha subunit [Plesiocystis pacifica SIR-1] Length = 291 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 181/298 (60%), Positives = 227/298 (76%), Gaps = 7/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTK+LVQG+TGK G FH + ++ Y TQVV G+ P KG + + VPVF Sbjct: 1 MSVLVDKNTKLLVQGITGKTGAFHAKLSLEY-GTQVVAGVTPGKGGSKAL--DDRVPVFD 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+T ANASV++VPP A DAI+ES+ AE+PL++ ITEGIPV DMV VK LE Sbjct: 58 TVAEAVEKTGANASVVFVPPPFAADAIMESVSAEVPLVIAITEGIPVADMVVVKRFLEGK 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPG++TP+ C+IGIMPG I + G +G++SRSGTLTYEAV Q + GLGQ+TA Sbjct: 118 SSRLIGPNCPGVITPNQCRIGIMPGYIHQPGKIGVVSRSGTLTYEAVHQLTALGLGQTTA 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT F+D L+LF D E IVM+GEIGGSAEE A F+K+ KKP V Sbjct: 178 IGIGGDPVNGTNFVDCLQLFNEDPECEGIVMIGEIGGSAEEAGAAFIKEHV----KKPCV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG +APPG+ MGHAGA+ISGGKG AE K+ A+++AG+ IA +P+ IG S+ L+G Sbjct: 234 GFIAGVSAPPGKRMGHAGAIISGGKGTAEAKLEALRDAGVKIADTPSDIGSSMASLMG 291 >gi|300120129|emb|CBK19683.2| Succinyl-CoA Synthetase subunit ? (SCS?) [Blastocystis hominis] Length = 318 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 183/297 (61%), Positives = 232/297 (78%), Gaps = 10/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFTT 61 + +DKNTKV+ QG+TGK GTFHT+QAI Y T++VGG++PKK GST+ + +P+F++ Sbjct: 24 VWIDKNTKVIGQGITGKNGTFHTQQAIEY-GTKMVGGVNPKKAGSTH-----LGLPIFSS 77 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EAK+ T A+A+VIYVPPSGA AI+E++ AEIPLIVCITEGIP DM+RVK ++ +S Sbjct: 78 VEEAKKATNADATVIYVPPSGAASAILEAVAAEIPLIVCITEGIPQHDMLRVKDIMKSQS 137 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P CKIGIMPG I +KG +G++SRSGTLTYEAV QT++ GLGQST Sbjct: 138 KSRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGVVSRSGTLTYEAVAQTTKYGLGQSTV 197 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID LE F D TE IVM+GEIGG+AEE+AA++LK KP+V Sbjct: 198 VGIGGDPFNGTNFIDCLERFTNDPQTEGIVMIGEIGGTAEEDAAEWLKQYGD--PSKPVV 255 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISGGKG A+ K+ AM GI + +PA+IG ++ L+ Sbjct: 256 GFIAGRTAPPGRRMGHAGAIISGGKGTAKAKMEAMTAVGIKVVDTPAQIGEAIYGLM 312 >gi|92399543|gb|ABE76513.1| mitochondrial putative GDP-forming succinate-CoA ligase alpha subunit [Toxoplasma gondii] Length = 333 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 183/298 (61%), Positives = 229/298 (76%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHP-KKGSTYWTG-GNVNVPVFT 60 + VDKNTKV+ QGLTGK G+FHTEQ + Y TQ VGG++P KKGST+ + G ++PVF Sbjct: 33 VFVDKNTKVICQGLTGKQGSFHTEQCLAY-GTQFVGGVNPSKKGSTWQSSDGKFSLPVFG 91 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEK 119 TV EAKE T +AS+I+VPP A AI++ I EIPL VCITEGIP DMVRVK A L + Sbjct: 92 TVKEAKEATGCDASMIFVPPPFAAQAIMDCIAEEIPLAVCITEGIPQQDMVRVKQALLSQ 151 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +RLIGPNCPGI+ P CKIGIMPG I KG +G++SRSGTLTYEAV QT+Q GLGQST Sbjct: 152 NKTRLIGPNCPGIIKPGECKIGIMPGYIHAKGKIGVVSRSGTLTYEAVNQTTQTGLGQST 211 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT FID LE F+ D T+ IV++GEIGGSAEEEAA +LK+ K +KP+ Sbjct: 212 CVGIGGDPFNGTNFIDCLERFVNDPETKGIVLIGEIGGSAEEEAAAWLKEHNK--EQKPV 269 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V F+AG TAPPGR MGHAGA++SGGKG AE KI A+++AG+ + +PA +G+ ++E++ Sbjct: 270 VSFIAGLTAPPGRRMGHAGAIVSGGKGTAEGKIAALEDAGVHVVRNPAAMGQKMLEVM 327 >gi|322514064|ref|ZP_08067135.1| succinyl-CoA synthetase subunit alpha [Actinobacillus ureae ATCC 25976] gi|322120081|gb|EFX92052.1| succinyl-CoA synthetase subunit alpha [Actinobacillus ureae ATCC 25976] Length = 290 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 183/297 (61%), Positives = 226/297 (76%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGGI P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGISPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A SVIYVP G DAI+E+I+A I LIVCITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVEKTGATTSVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMLIVKQKLKES 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPGI+TPD CKIGIMP I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGIITPDECKIGIMPAHIHKKGKIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF +D TE+IVM+GEIGG+AEEEAA+F+K KP+V Sbjct: 176 VGIGGDPIPGSSFIDILKLFQSDPETEAIVMIGEIGGTAEEEAAEFIKMHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG +L ELL Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFKALEQAGVKTVRSLAEIGAALNELL 288 >gi|21593483|gb|AAM65450.1| succinyl-CoA synthetase, alpha subunit [Arabidopsis thaliana] Length = 341 Score = 355 bits (912), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 183/297 (61%), Positives = 223/297 (75%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++V G+ PKKG T G +PVF T Sbjct: 46 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVAGVTPKKGGTEHLG----LPVFNT 100 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEAK T ANASVIYVP A AI+E + AE+ LIVCITEGIP DMVRVKA L +S Sbjct: 101 VAEAKAETKANASVIYVPAPFAAAAIMEGLAAELDLIVCITEGIPQHDMVRVKAALNSQS 160 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 161 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTC 220 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F D TE IV++GEIGG+AEE+AA +K+ G KP+V Sbjct: 221 VGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIKEN---GTDKPVV 277 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DK ++++AG+ + SPA+IG ++ EL Sbjct: 278 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKTKSLRDAGVKVVESPAKIGAAMFELF 334 >gi|300176246|emb|CBK23557.2| Succinyl-CoA Synthetase subunit ? (SCS?) [Blastocystis hominis] Length = 318 Score = 355 bits (912), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 183/297 (61%), Positives = 231/297 (77%), Gaps = 10/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFTT 61 + +DKNTKV+ QG+TGK GTFHT+QAI Y T++VGG++PKK GST+ + +P+F + Sbjct: 24 VWIDKNTKVIGQGITGKNGTFHTQQAIEY-GTKMVGGVNPKKAGSTH-----LGLPIFAS 77 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EAK+ T A+A+VIYVPPSGA AI+E++ AEIPLIVCITEGIP DM+RVK ++ +S Sbjct: 78 VEEAKKATNADATVIYVPPSGAASAILEAVAAEIPLIVCITEGIPQHDMLRVKDIMKSQS 137 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P CKIGIMPG I +KG +G++SRSGTLTYEAV QT++ GLGQST Sbjct: 138 KSRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGVVSRSGTLTYEAVAQTTKYGLGQSTV 197 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID LE F D TE IVM+GEIGG+AEE+AA++LK KP+V Sbjct: 198 VGIGGDPFNGTNFIDCLERFTNDPQTEGIVMIGEIGGTAEEDAAEWLKQYGD--PSKPVV 255 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISGGKG A+ K+ AM GI + +PA+IG ++ L+ Sbjct: 256 GFIAGRTAPPGRRMGHAGAIISGGKGTAKAKMEAMTAVGIKVVDTPAQIGEAIYGLM 312 >gi|253998618|ref|YP_003050681.1| succinyl-CoA synthetase subunit alpha [Methylovorus sp. SIP3-4] gi|313200692|ref|YP_004039350.1| succinyl-CoA synthetase subunit alpha [Methylovorus sp. MP688] gi|253985297|gb|ACT50154.1| succinyl-CoA synthetase, alpha subunit [Methylovorus sp. SIP3-4] gi|312440008|gb|ADQ84114.1| succinyl-CoA synthetase, alpha subunit [Methylovorus sp. MP688] Length = 295 Score = 355 bits (912), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 177/293 (60%), Positives = 228/293 (77%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVD++TKVL QG TGK GTFH+EQA+ Y T++VGG+ P KG ++++PVF Sbjct: 1 MAILVDQHTKVLCQGFTGKQGTFHSEQALAY-GTRMVGGVTPGKGGQQ----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A T ANASVIYVPP A D+I+E+ +A +PLIVCITEGIPVLDM+ VKA L+ + Sbjct: 56 TMRDAVRETGANASVIYVPPPFAADSILEACDAGVPLIVCITEGIPVLDMLNVKAALKAN 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TPD+CKIGIMPGSI +G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GARLIGPNCPGVITPDACKIGIMPGSIHLRGKVGIVSRSGTLTYEAVHQTTALGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP++G FID L LF D TE+I+MVGEIGG+ EE AA+++K KP+ Sbjct: 176 VGIGGDPIRGMNFIDCLALFEQDPETEAIIMVGEIGGADEEAAAEYIKQHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 G++AG+TAP G+ MGHAGA+ISGG G AEDKI A+++AG+ +A SPA +G ++ Sbjct: 232 GYIAGQTAPKGKRMGHAGAIISGGSGKAEDKIRALEQAGVIVASSPAGLGEAV 284 >gi|144898024|emb|CAM74888.1| Succinyl-CoA synthetase alpha chain [Magnetospirillum gryphiswaldense MSR-1] Length = 291 Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 179/297 (60%), Positives = 228/297 (76%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+ NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG + ++++PVF Sbjct: 1 MAVLVNANTKVICQGFTGAQGTFHSEQAIAY-GTKMVGGVTPGKGGSK----HLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK +T NASVIYVPP A DAI+E+I+AEI L VCITEGIPV DM+ VK L S Sbjct: 56 TVAEAKAKTGCNASVIYVPPPFAADAILEAIDAEIELAVCITEGIPVADMLTVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+ GLGQ+T Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHQRGKVGIVSRSGTLTYEAVAQTTAAGLGQTTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT F+D L++FL D TE+I+M+GEIGG AE + A+ L+ KKP V Sbjct: 176 IGIGGDPINGTNFVDSLQMFLDDPETEAIIMIGEIGGDAEVQGAELLRSSKI---KKPTV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGAVISGG A+ KI+AM+ AGI +A SPA +G +++++L Sbjct: 233 GFIAGRTAPPGRRMGHAGAVISGGNDTADFKIDAMRSAGIAVADSPASLGSTMLKVL 289 >gi|190149797|ref|YP_001968322.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252121|ref|ZP_07338289.1| succinyl-CoA synthetase alpha chain [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247457|ref|ZP_07529502.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307263117|ref|ZP_07544738.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914928|gb|ACE61180.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648904|gb|EFL79092.1| succinyl-CoA synthetase alpha chain [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855960|gb|EFM88118.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306871479|gb|EFN03202.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 290 Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 184/297 (61%), Positives = 225/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTKLVGGVSPNKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A ASVIYVP G DAI+E+I+A I LIVCITEGIP LDMV VK +L++S Sbjct: 56 TVREAVEKTGATASVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMVCVKQKLKES 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPGI+TPD CKIGIMP I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGIITPDECKIGIMPAHIHKKGKIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF AD TE+IVM+GEIGGSAEEEAA+F+K KP+V Sbjct: 176 VGIGGDPIPGSSFIDILKLFQADPETEAIVMIGEIGGSAEEEAAEFIKMHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG A++K ++ AG+ S A IG +L ELL Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFKTLENAGVKTVRSLAEIGSALRELL 288 >gi|229019030|ref|ZP_04175871.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH1273] gi|229025276|ref|ZP_04181696.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH1272] gi|229061438|ref|ZP_04198783.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH603] gi|229168574|ref|ZP_04296297.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH621] gi|228614980|gb|EEK72082.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH621] gi|228717861|gb|EEL69509.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH603] gi|228736029|gb|EEL86604.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH1272] gi|228742270|gb|EEL92429.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH1273] Length = 300 Score = 355 bits (911), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 178/297 (59%), Positives = 230/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTDIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++A+I L+VCITEGIPVLDMV VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAKIDLVVCITEGIPVLDMVNVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 HTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA+++ + KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWV----QANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPEGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVL 288 >gi|15615032|ref|NP_243335.1| succinyl-CoA synthetase subunit alpha [Bacillus halodurans C-125] gi|10175089|dbj|BAB06188.1| succinyl-CoA synthetase (alpha subunit) [Bacillus halodurans C-125] Length = 302 Score = 355 bits (911), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 231/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+VQG+TG G FHT+QA+ Y T +VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVIVQGITGATGLFHTKQAVEY-GTNIVGGVTPGKGGTEVEG----IPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A E T ANASVIYVPP+ A DAI+E+++AE+ L +CITEGIPV+DMV+VK +E Sbjct: 56 TVSQAVEATGANASVIYVPPAFAADAIMEAVDAELDLAICITEGIPVMDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S G+GQSTA Sbjct: 116 KTRLVGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSTAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+LF D T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKLFNEDPDTYAVIMIGEIGGTAEEEAAEWI----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI ++ G+ +A +P+ +G +L+ +L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKTLESCGVKVAETPSVMGETLISVL 288 >gi|32034771|ref|ZP_00134896.1| COG0074: Succinyl-CoA synthetase, alpha subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207935|ref|YP_001053160.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae L20] gi|165975910|ref|YP_001651503.1| succinyl-CoA synthetase alpha chain [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303250243|ref|ZP_07336443.1| succinyl-CoA synthetase alpha chain [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307245290|ref|ZP_07527378.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307252008|ref|ZP_07533908.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307254239|ref|ZP_07536080.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307256505|ref|ZP_07538286.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307258701|ref|ZP_07540433.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260933|ref|ZP_07542617.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|126096727|gb|ABN73555.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165876011|gb|ABY69059.1| succinyl-CoA synthetase alpha chain [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302650859|gb|EFL81015.1| succinyl-CoA synthetase alpha chain [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306853631|gb|EFM85848.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306860477|gb|EFM92490.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306862786|gb|EFM94739.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306864915|gb|EFM96817.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306867052|gb|EFM98908.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869372|gb|EFN01165.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 290 Score = 355 bits (910), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 183/297 (61%), Positives = 225/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTKLVGGVSPNKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A ASVIYVP G DAI+E+I+A I LIVCITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVEKTGATASVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMICVKQKLKES 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPGI+TPD CKIGIMP I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGIITPDECKIGIMPAHIHKKGKIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF AD TE+IVM+GEIGGSAEEEAA+F+K KP+V Sbjct: 176 VGIGGDPIPGSSFIDILKLFQADPETEAIVMIGEIGGSAEEEAAEFIKMHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG A++K ++ AG+ S A IG +L ELL Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFKTLENAGVKTVRSLAEIGSALRELL 288 >gi|163941573|ref|YP_001646457.1| succinyl-CoA synthetase subunit alpha [Bacillus weihenstephanensis KBAB4] gi|229013018|ref|ZP_04170183.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus mycoides DSM 2048] gi|229134643|ref|ZP_04263452.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BDRD-ST196] gi|163863770|gb|ABY44829.1| succinyl-CoA synthetase, alpha subunit [Bacillus weihenstephanensis KBAB4] gi|228648689|gb|EEL04715.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BDRD-ST196] gi|228748272|gb|EEL98132.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus mycoides DSM 2048] Length = 300 Score = 355 bits (910), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 177/297 (59%), Positives = 230/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTDIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++A++ L+VCITEGIPVLDMV VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAKVDLVVCITEGIPVLDMVNVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 HTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA+++ + KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWV----QANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPEGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVL 288 >gi|288959418|ref|YP_003449759.1| succinyl-CoA synthetase alpha chain [Azospirillum sp. B510] gi|288911726|dbj|BAI73215.1| succinyl-CoA synthetase alpha chain [Azospirillum sp. B510] Length = 291 Score = 354 bits (909), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 186/297 (62%), Positives = 234/297 (78%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVDKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG ++++P+F Sbjct: 1 MAVLVDKNTKVICQGFTGAQGTFHSEQAIAY-GTKMVGGVTPGKGGAK----HLDLPIFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+T ANASVIYVPP A DAI+E+I+AEIPL+VCITEGIPVLDMVRVK L S Sbjct: 56 TVAEAVEKTGANASVIYVPPPFAADAILEAIDAEIPLVVCITEGIPVLDMVRVKRALNGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPG++TPD CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQ+T Sbjct: 116 ATRLIGPNCPGVITPDECKIGIMPGHIHKRGKIGIVSRSGTLTYEAVAQTTAAGLGQTTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT F+D LELF+ D TE I+M+GEIGG AE + A+F+K G +KP+V Sbjct: 176 IGIGGDPVNGTNFVDSLELFVKDPETEGIIMIGEIGGDAEVKGAEFIK---ASGTRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGAVISGG A+ KI+ MK GI +A SPA +G +++++ Sbjct: 233 GFIAGRTAPPGRRMGHAGAVISGGNDTADFKIDFMKSVGIAVADSPASLGSTMLKVF 289 >gi|157692289|ref|YP_001486751.1| succinyl-CoA synthetase subunit alpha [Bacillus pumilus SAFR-032] gi|194014871|ref|ZP_03053488.1| succinate-CoA ligase, alpha subunit subfamily [Bacillus pumilus ATCC 7061] gi|157681047|gb|ABV62191.1| succinate--CoA ligase (ADP-forming) alpha subunit [Bacillus pumilus SAFR-032] gi|194013897|gb|EDW23462.1| succinate-CoA ligase, alpha subunit subfamily [Bacillus pumilus ATCC 7061] Length = 300 Score = 354 bits (909), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 174/297 (58%), Positives = 229/297 (77%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++KNT+V+VQG+TG FHT+Q I Y T +VGG+ P KG T G VPVF Sbjct: 1 MSVFINKNTRVIVQGITGSTALFHTKQMIEY-GTNIVGGVTPGKGGTEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA + T ANASVIYVP A DAI+E+++AE+ L++CITE IPVLDMV+VK +E Sbjct: 56 TVSEAVQTTGANASVIYVPAPFAADAILEAVDAEVDLVICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S+ G+GQSTA Sbjct: 116 KTRLVGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGVGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPDTHAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ GKTAPPG+ MGHAGA+ISGGKG A++K+ M+E GI +A +P+ +G +L+++L Sbjct: 232 GFIGGKTAPPGKRMGHAGAIISGGKGTADEKVKTMRECGIEVAETPSVMGETLIKVL 288 >gi|114321695|ref|YP_743378.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Alkalilimnicola ehrlichii MLHE-1] gi|114228089|gb|ABI57888.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Alkalilimnicola ehrlichii MLHE-1] Length = 290 Score = 354 bits (908), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 179/297 (60%), Positives = 225/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKV+VQG TGK GTFH EQAI Y T VVGG+ P +G ++++PVF Sbjct: 1 MSVLVDKNTKVIVQGFTGKQGTFHAEQAIAY-GTNVVGGVTPGRGGQT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A+AS+IYVP + A DAI+E+ +A I +I CITEGIPVLDM++VKA L + Sbjct: 56 TVEDAVQETGADASMIYVPAAFAADAILEAADAGIKVIACITEGIPVLDMLKVKAALAQY 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I + GS+GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 DARLIGPNCPGVITPGECKIGIMPGHIHKAGSIGIVSRSGTLTYEAVKQTTDIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G FID LELF AD T+ IVMVGEIGG+AEEEAA++++ KP+V Sbjct: 176 IGIGGDPIHGMSFIDALELFQADPQTKGIVMVGEIGGTAEEEAAEYIQQNV----DKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAPPG+ MGHAGA+I+GGKG A+DK A++ AG+ SPA IG+ L EL Sbjct: 232 AYIAGVTAPPGKRMGHAGAIIAGGKGTADDKFAALESAGVATVRSPAEIGQKLNELF 288 >gi|315648146|ref|ZP_07901247.1| succinyl-CoA synthetase, alpha subunit [Paenibacillus vortex V453] gi|315276792|gb|EFU40135.1| succinyl-CoA synthetase, alpha subunit [Paenibacillus vortex V453] Length = 309 Score = 354 bits (908), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 178/302 (58%), Positives = 228/302 (75%), Gaps = 10/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGST-----YWTGGNVN 55 MSIL+DKNTKV+ QG+TGK FH + A+ Y TQ+VGG P KG T G V Sbjct: 1 MSILIDKNTKVITQGITGKTALFHAKGALDY-GTQMVGGTSPGKGGTEVEITLENGETVK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PV+ TV EAK +T A ASVIYVPP+ A D+I+E+++AE+ L++CITEGIPVLDMV+V Sbjct: 60 LPVYNTVEEAKAKTGATASVIYVPPAFAADSILEAVDAEMDLVICITEGIPVLDMVKVSR 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 LE +RLIGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAV Q + G+ Sbjct: 120 YLEGKKTRLIGPNCPGVITPGECKIGIMPGYIHTPGHVGVVSRSGTLTYEAVHQLTARGI 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQS+AVGIGGDPVKGTEFIDVL LF D T++++M+GEIGG+AEEEAA+++ K Sbjct: 180 GQSSAVGIGGDPVKGTEFIDVLRLFNEDPNTKAVIMIGEIGGTAEEEAAEWI----KANM 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VGF+ G TAPPG+ MGHAGA+ISGGKG A++KI ++ G+ +AP+PA +G +LV Sbjct: 236 NKPVVGFIGGATAPPGKRMGHAGAIISGGKGTAKEKIAVLEACGVKVAPTPAEMGSTLVS 295 Query: 296 LL 297 +L Sbjct: 296 VL 297 >gi|88608406|ref|YP_506144.1| succinyl-CoA synthetase, alpha subunit [Neorickettsia sennetsu str. Miyayama] gi|88600575|gb|ABD46043.1| succinyl-CoA synthetase, alpha subunit [Neorickettsia sennetsu str. Miyayama] Length = 290 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 181/297 (60%), Positives = 224/297 (75%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+K T+V+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MAILVNKETRVICQGFTGHQGTFHSEQAIEY-GTKMVGGVTPGKGGQMHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A++ T ANA+VIYVP A DAI+E+I+AEI LIVCITEGIPV DM+RVK+ L S Sbjct: 56 TVYHARKETGANATVIYVPAPFAMDAILEAIDAEIELIVCITEGIPVQDMMRVKSALSNS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPGI+TP CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQST Sbjct: 116 KSLLIGPNCPGIITPGECKIGIMPGYIHKRGKIGIVSRSGTLTYEAVAQTTQMGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDPVKG +F+D +++FL D TE+I+M+GEIGGSAEE+A LK KKP V Sbjct: 176 IGVGGDPVKGLDFVDCVKMFLDDPETEAIIMIGEIGGSAEEKACALLKSSQS---KKPTV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPGR MGHAGA+IS AE KI MK+AGI IA +PA IG+++ +L+ Sbjct: 233 GFIAGATAPPGRRMGHAGAIISSSDESAESKIKVMKDAGIVIAETPALIGKTVADLI 289 >gi|158634608|gb|ABW76150.1| succinyl-CoA synthetase alpha subunit [Blastocystis sp. NandII] gi|164608344|gb|ABY62723.1| mitochondrial succinyl-CoA synthetase alpha subunit [Blastocystis sp. ATCC 50177] Length = 318 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 179/296 (60%), Positives = 227/296 (76%), Gaps = 8/296 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT+V+ QG+TGK GTFHT+QAI Y T++VGG++PKK T G +P+F +V Sbjct: 24 VWVDKNTRVIGQGITGKNGTFHTQQAIEY-GTKMVGGVNPKKAGTTHLG----LPIFASV 78 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSS 121 EAK+ T A+A+VIYVPPSGA AI+E++ AEIPLIVCITEGIP DM+RVK ++ ++ Sbjct: 79 EEAKKATNADATVIYVPPSGAAGAILEAVAAEIPLIVCITEGIPQHDMLRVKDIMKSQNK 138 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 SRLIGPNCPGI+ P+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQST V Sbjct: 139 SRLIGPNCPGIIKPEECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVHQTTMYGLGQSTVV 198 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE F D TE IVM+GEIGG+AEE+AA++LK KP+V Sbjct: 199 GIGGDPFNGTNFIDCLERFTNDPQTEGIVMIGEIGGTAEEDAAEWLKQYGN--PNKPVVS 256 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAPPGR MGHAGA+ISGGKG A+ K+ A+ AG+ + +PA IG ++ ++ Sbjct: 257 FIAGRTAPPGRRMGHAGAIISGGKGTAKAKMEALTSAGVKVVETPAMIGEAMFNMM 312 >gi|261407993|ref|YP_003244234.1| succinyl-CoA synthetase subunit alpha [Paenibacillus sp. Y412MC10] gi|329929342|ref|ZP_08283095.1| succinyl-CoA synthetase, alpha subunit [Paenibacillus sp. HGF5] gi|261284456|gb|ACX66427.1| succinyl-CoA synthetase, alpha subunit [Paenibacillus sp. Y412MC10] gi|328936711|gb|EGG33154.1| succinyl-CoA synthetase, alpha subunit [Paenibacillus sp. HGF5] Length = 309 Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 178/302 (58%), Positives = 228/302 (75%), Gaps = 10/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGST-----YWTGGNVN 55 MSIL+DKNTKV+ QG+TGK FH + A+ Y TQ+VGG P KG T G V Sbjct: 1 MSILIDKNTKVITQGITGKTALFHAKGALDY-GTQMVGGTSPGKGGTEVEITLENGETVK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PV+ TV EAK +T A ASVIYVPP+ A D+I+E+++AE+ L++CITEGIPVLDMV+V Sbjct: 60 LPVYNTVEEAKAKTGATASVIYVPPAFAADSILEAVDAEMDLVICITEGIPVLDMVKVSR 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +E +RLIGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAV Q + G+ Sbjct: 120 YMEGKKTRLIGPNCPGVITPGECKIGIMPGYIHTPGHVGVVSRSGTLTYEAVHQLTARGI 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQS+AVGIGGDPVKGTEFIDVL LF D T++++M+GEIGG+AEEEAA+++K Sbjct: 180 GQSSAVGIGGDPVKGTEFIDVLRLFNEDPNTKAVIMIGEIGGTAEEEAAEWIKAN----M 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VGF+ G TAPPG+ MGHAGA+ISGGKG A++KI ++ GI +AP+PA +G +LV Sbjct: 236 TKPVVGFIGGATAPPGKRMGHAGAIISGGKGTAKEKIAVLEACGIKVAPTPAEMGSTLVS 295 Query: 296 LL 297 +L Sbjct: 296 VL 297 >gi|260831053|ref|XP_002610474.1| hypothetical protein BRAFLDRAFT_124275 [Branchiostoma floridae] gi|229295840|gb|EEN66484.1| hypothetical protein BRAFLDRAFT_124275 [Branchiostoma floridae] Length = 323 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 178/300 (59%), Positives = 228/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I + K+TKV+ QG TGK GTFH++Q+I Y +Q+VGG+ P KG G +PVF + Sbjct: 27 NIAIGKDTKVICQGFTGKQGTFHSQQSIEY-GSQMVGGVSPGKGGKTHLG----LPVFNS 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAKE T A ASVIYVPP AG AI+E+I AE+ L+VCITEGIP DMV+VK RL + Sbjct: 82 VAEAKEATGAVASVIYVPPPFAGKAILEAINAEMSLVVCITEGIPQQDMVKVKHRLVRQD 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G++GI+SRSGTLTYEAV QT++ GLGQ+ Sbjct: 142 KTRLIGPNCPGIIKPGECKIGIMPGHIHQPGNIGIVSRSGTLTYEAVHQTTRAGLGQTLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT F+D LE+FL D AT+ IVM+GEIGGS EE AA++LK+ KKP+V Sbjct: 202 IGIGGDPFNGTNFVDCLEVFLGDPATKGIVMIGEIGGSMEESAAEYLKEHNTGPNKKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPGR MGHAGA+ISGGKG A+DKI A++EAG+ + SPA++G ++++ + L Sbjct: 262 SFIAGVTAPPGRRMGHAGAIISGGKGAAQDKIQALQEAGVEVTMSPAQMGTTMLQEMQKL 321 >gi|16510|emb|CAA48891.1| succinate--CoA ligase (GDP-forming) [Arabidopsis thaliana] Length = 345 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 182/297 (61%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 + VDKNT+V+ QG+TGK GTFHTEQAI Y T++V G+ PKKG T G +PVF T Sbjct: 50 QVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVAGVTPKKGGTEHLG----LPVFNT 104 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEAK T ANASVIYVP A AI+E + AE+ LIVCITEGIP DMVRVKA L +S Sbjct: 105 VAEAKAETKANASVIYVPAPFAAAAIMEGLAAELDLIVCITEGIPQHDMVRVKAALNSQS 164 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 165 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTC 224 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F D TE IV++GEIGG+AEE+AA +K+ G KP+V Sbjct: 225 VGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIKEN---GTDKPVV 281 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAG ++SGGKG A+DKI ++++AG+ + SPA++G ++ EL Sbjct: 282 AFIAGLTAPPGRRMGHAGRIVSGGKGTAQDKIKSLRDAGVKVVESPAKLGAAMFELF 338 >gi|288960090|ref|YP_003450430.1| succinyl-CoA synthetase alpha chain [Azospirillum sp. B510] gi|288912398|dbj|BAI73886.1| succinyl-CoA synthetase alpha chain [Azospirillum sp. B510] Length = 291 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 186/297 (62%), Positives = 232/297 (78%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVDKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG ++++P+F Sbjct: 1 MAVLVDKNTKVICQGFTGAQGTFHSEQAIAY-GTKMVGGVTPGKGGAK----HLDLPIFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+T ANASVIYVPP A DAI+E+I+AEIPL+VCITEGIPVLDMVRVK L S Sbjct: 56 TVAEAVEKTGANASVIYVPPPFAADAILEAIDAEIPLVVCITEGIPVLDMVRVKRALNGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPG++TPD CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQ+T Sbjct: 116 ATRLIGPNCPGVITPDECKIGIMPGHIHKRGKIGIVSRSGTLTYEAVAQTTAAGLGQTTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT F+D LELF+ D TE I+M+GEIGG AE + A+F+K G +KP+V Sbjct: 176 IGIGGDPVNGTNFVDSLELFVKDPETEGIIMIGEIGGDAEVKGAEFIK---ASGTRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGAVISGG A+ KI+ MK GI +A SPA +G ++ + Sbjct: 233 GFIAGRTAPPGRRMGHAGAVISGGNDTADFKIDFMKSVGIAVADSPASLGSTMQAIF 289 >gi|254796634|ref|YP_003081470.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Neorickettsia risticii str. Illinois] gi|254589871|gb|ACT69233.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Neorickettsia risticii str. Illinois] Length = 290 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 181/297 (60%), Positives = 224/297 (75%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+K T+V+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MAILVNKETRVICQGFTGHQGTFHSEQAIEY-GTKMVGGVTPGKGGQMHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +AK+ T ANA+VIYVP A DAI+E+++AEI LIVCITEGIPV DM+RVK+ L S Sbjct: 56 TVYQAKKETGANATVIYVPAPFAMDAILEAVDAEIELIVCITEGIPVQDMMRVKSALSNS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPGI+TP CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQST Sbjct: 116 KSLLIGPNCPGIITPGECKIGIMPGYIHKRGKVGIVSRSGTLTYEAVAQTTQMGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDPVKG F+D +++FL D TE+IVM+GEIGGSAEE+A LK KKP V Sbjct: 176 IGVGGDPVKGLSFVDCVKMFLDDPETEAIVMIGEIGGSAEEKACALLKSSQ---TKKPTV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPG+ MGHAGA+IS AE KI MK+AG+ IA +PA IG+++ +L+ Sbjct: 233 GFIAGATAPPGKRMGHAGAIISSSDESAESKIRVMKDAGVVIAETPALIGKTVADLI 289 >gi|297584025|ref|YP_003699805.1| succinyl-CoA synthetase subunit alpha [Bacillus selenitireducens MLS10] gi|297142482|gb|ADH99239.1| succinyl-CoA synthetase, alpha subunit [Bacillus selenitireducens MLS10] Length = 303 Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 232/297 (78%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+VQG+TG G FHT+QAI Y T +VGG+ P KG T G VPVF Sbjct: 1 MSILINKDTKVIVQGITGATGLFHTKQAIEY-GTNIVGGVTPGKGGTEIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A + T A+ASVIYVPP A DAI+E+ +A + +++ ITEGIPV DM++VK +E Sbjct: 56 TVSDAVKETGAHASVIYVPPPFAADAIMEATDAGVDVVITITEGIPVTDMIKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S EG+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSTEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FIDVL++F D TE+++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTDFIDVLKMFNEDPDTEAVIMIGEIGGTAEEEAAEWI----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI + AG+ +A +PA +G +L+++L Sbjct: 232 GFIGGRTAPPGKRMGHAGAIISGGKGTADEKIKTLNAAGVQVADTPAVMGETLIKVL 288 >gi|253996050|ref|YP_003048114.1| succinyl-CoA synthetase subunit alpha [Methylotenera mobilis JLW8] gi|253982729|gb|ACT47587.1| succinyl-CoA synthetase, alpha subunit [Methylotenera mobilis JLW8] Length = 293 Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 179/294 (60%), Positives = 224/294 (76%), Gaps = 9/294 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKVL QG TGK GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILVNKNTKVLCQGFTGKQGTFHSEQALAY-GTQMVGGVTPGKGGQLHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A T ANASVIYVPP+ A D+I+E+ +A I LI+CITEGIPVLDM+ VKA L+ + Sbjct: 56 TMRDAVRTTGANASVIYVPPAFAADSILEASDAGIELIICITEGIPVLDMLNVKAALKAN 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TPD CKIGIMPGSI +G VG++SRSGTLTYEAV QT+ LGQST Sbjct: 116 GTRLIGPNCPGVITPDECKIGIMPGSIHLRGKVGVVSRSGTLTYEAVHQTTALNLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KG FI+ LE+F AD TE+I+MVGEIGGS EE AA+F+K +KP+ Sbjct: 176 VGIGGDPIKGLNFIECLEMFEADPETEAIIMVGEIGGSDEEAAAEFIKSNV----RKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 ++AG+TAP G+ MGHAGA+ISGG G A DKI A++ AG +A SPA +G +++ Sbjct: 232 AYIAGQTAPAGKRMGHAGAIISGGSGKAADKIRALELAGAVVASSPAGLGEAVL 285 >gi|145637049|ref|ZP_01792712.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae PittHH] gi|260582126|ref|ZP_05849920.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae NT127] gi|145269703|gb|EDK09643.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae PittHH] gi|260094758|gb|EEW78652.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae NT127] Length = 293 Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 184/299 (61%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP S DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|301169938|emb|CBW29542.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Haemophilus influenzae 10810] Length = 293 Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 184/299 (61%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP S DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPIPGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|332288474|ref|YP_004419326.1| succinyl-CoA synthetase subunit alpha [Gallibacterium anatis UMN179] gi|330431370|gb|AEC16429.1| succinyl-CoA synthetase subunit alpha [Gallibacterium anatis UMN179] Length = 289 Score = 352 bits (903), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 182/298 (61%), Positives = 225/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP G DAI+E+I+A I LIVCITEGIP DM+ VK +L ++ Sbjct: 56 TVREAVEATGATASVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTEDMLVVKQKLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMP I +KGS+GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPAHIHKKGSIGIVSRSGTLTYEAVKQTTDEGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF AD T++IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSSFIDILKLFQADPETKAIVMIGEIGGSAEEEAAAYIKQNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S A IG++L E+LG Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKYAALEAAGVRTVRSLADIGKALREILG 289 >gi|330445472|ref|ZP_08309124.1| succinyl-CoA synthetase, alpha subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489663|dbj|GAA03621.1| succinyl-CoA synthetase, alpha subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 290 Score = 352 bits (902), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 182/296 (61%), Positives = 225/296 (76%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP LDM+ VK RL+++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTLDMLDVKVRLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKAGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D ATE+IVM+GEIGG+AEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPATEAIVMIGEIGGTAEEEAAAYIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++EAG+ S A IG++L E+ Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEEAGVKTVKSLADIGKALREV 287 >gi|168057210|ref|XP_001780609.1| predicted protein [Physcomitrella patens subsp. patens] gi|162667975|gb|EDQ54592.1| predicted protein [Physcomitrella patens subsp. patens] Length = 299 Score = 352 bits (902), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 227/297 (76%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK T+++VQG+TGK GTFHTEQAI Y TQVVGG+ P KG T G +PVF T Sbjct: 5 AVFVDKATRLIVQGITGKNGTFHTEQAIAY-GTQVVGGVTPNKGGTQHLG----LPVFNT 59 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+ ANA+VIYVPP A +AI+E+++AE+ L+VCITEGIP DM RVKA L +S Sbjct: 60 VAEAKQGVQANATVIYVPPKMACNAILEALDAELDLVVCITEGIPQQDMARVKAALLSQS 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT++ GLGQST Sbjct: 120 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTRVGLGQSTC 179 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT F+D L F+ D TE +V++GEIGGS EE+AA+F+ G +KP+V Sbjct: 180 IGIGGDPFSGTSFVDCLRCFVKDPQTEGVVLIGEIGGSGEEDAARFI---VSSGTQKPVV 236 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 FVAG TAPPGR MGHAGA+I+GG+G A+ K+ A++ AG+ + SPA +G++++++ Sbjct: 237 AFVAGLTAPPGRRMGHAGAIIAGGRGTAQAKMKALRAAGVTVVESPAHLGKTILKVF 293 >gi|319649578|ref|ZP_08003734.1| succinyl-CoA ligase subunit alpha [Bacillus sp. 2_A_57_CT2] gi|317398740|gb|EFV79422.1| succinyl-CoA ligase subunit alpha [Bacillus sp. 2_A_57_CT2] Length = 300 Score = 352 bits (902), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 176/297 (59%), Positives = 226/297 (76%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+TKV+VQG+TG FHT+Q + Y TQ+VGG+ P KG T G VPVF Sbjct: 1 MSVFINKDTKVIVQGITGSTALFHTKQMLEY-GTQIVGGVTPGKGGTEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T ANASVIYVP A DAI+E+++AE+ L +CITE IPVLDMV+VK +E Sbjct: 56 TVEEAVKATGANASVIYVPAPFAADAILEAVDAELDLAICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I KG VG++SRSGTLTYEAV Q SQ G+GQSTA Sbjct: 116 KTRLVGPNCPGVITPDECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLSQAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPETYAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI M E GI +A +P+ +G +L+++L Sbjct: 232 GFIGGRTAPPGKRMGHAGAIISGGKGTADEKIRVMNECGIQVADTPSVMGETLIKVL 288 >gi|253573509|ref|ZP_04850852.1| succinyl-CoA synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251847037|gb|EES75042.1| succinyl-CoA synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 309 Score = 351 bits (901), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 177/302 (58%), Positives = 230/302 (76%), Gaps = 10/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGST-----YWTGGNVN 55 MSILVDKNTKV+ QG+TGK FH + A+ Y TQ+VGG P KG T +G V+ Sbjct: 1 MSILVDKNTKVITQGITGKTALFHAKGALDY-GTQMVGGTSPGKGGTKVDITLESGETVS 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV EAKE T A ASVIYVPP+ A D+I+E++EAE+ L++CITEGIPVLDMV+VK Sbjct: 60 LPVFNTVREAKEATGATASVIYVPPAFAADSILEAVEAELDLVICITEGIPVLDMVKVKR 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +E + LIGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAV Q + G+ Sbjct: 120 YMEGKKTVLIGPNCPGVITPGECKIGIMPGYIHLPGHVGVVSRSGTLTYEAVHQLTTRGI 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQS+AVGIGGDPVKG+EFID+L F D+ T +++M+GEIGG+AEEEAA+++ ++ Sbjct: 180 GQSSAVGIGGDPVKGSEFIDILRRFNDDDNTHAVIMIGEIGGTAEEEAAEWI----QKNM 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VGF+ G TAPPG+ MGHAGA+ISGGKG A++KI ++ GI +AP+P+ +G +LV Sbjct: 236 TKPVVGFIGGVTAPPGKRMGHAGAIISGGKGTAKEKIAKLESCGIKVAPTPSEMGATLVS 295 Query: 296 LL 297 +L Sbjct: 296 VL 297 >gi|148826194|ref|YP_001290947.1| succinyl-CoA synthetase subunit alpha [Haemophilus influenzae PittEE] gi|148716354|gb|ABQ98564.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae PittEE] Length = 293 Score = 351 bits (901), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 183/299 (61%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T + A+VIYVP S DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVCEAVENTGSTATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A+ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALDAAGVTCVKSLAEIGEALRKLLKS 290 >gi|311030143|ref|ZP_07708233.1| succinyl-CoA synthetase subunit alpha [Bacillus sp. m3-13] Length = 300 Score = 351 bits (901), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 176/297 (59%), Positives = 228/297 (76%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+TKV+VQG+TG FHT+Q + Y TQ+VGG+ P KG T G VPVF Sbjct: 1 MSVFINKDTKVIVQGITGSTALFHTKQMLEY-GTQIVGGVTPGKGGTEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T ANASVIYVP A DAI+E+++AE+ L +CITE IPVLDMV+VK +E Sbjct: 56 TVEEAVKATGANASVIYVPAPFAADAIMEAVDAELDLAICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CKIGIMPG I KG VG++SRSGTLTYEAV Q SQEG+GQSTA Sbjct: 116 KTRLVGPNCPGVITPGECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLSQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FIDVL+ F DE T +++M+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPVNGTDFIDVLKAFNEDEDTFAVIMIGEIGGTAEEEAALWVKEN----MTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI M E GI +A +P+ +G +L++++ Sbjct: 232 GFIGGRTAPPGKRMGHAGAIISGGKGTADEKIRVMNECGIEVADTPSVMGETLIKVI 288 >gi|309751160|gb|ADO81144.1| Succinyl-CoA synthetase, alpha subunit [Haemophilus influenzae R2866] Length = 293 Score = 351 bits (901), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 183/299 (61%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP S DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEE A F+KD KP+V Sbjct: 176 VGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEVAIFIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|308068643|ref|YP_003870248.1| succinyl-CoA synthetase subunit alpha (SCS-alpha) [Paenibacillus polymyxa E681] gi|305857922|gb|ADM69710.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Paenibacillus polymyxa E681] Length = 309 Score = 351 bits (900), Expect = 8e-95, Method: Compositional matrix adjust. Identities = 176/302 (58%), Positives = 229/302 (75%), Gaps = 10/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGST-----YWTGGNVN 55 MSILVDK+TKV+ QG+TGK FH + A+ Y TQ+VGG P KG T G V Sbjct: 1 MSILVDKHTKVITQGITGKTALFHAKGALDY-GTQMVGGTSPGKGGTEVEITLENGQQVK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV+EAKE T A ASVIYVPP+ A D+I+E+++AE+ L++CITEGIPVLDM+RVK Sbjct: 60 LPVFNTVSEAKEATGATASVIYVPPAFAADSILEAVDAELDLVICITEGIPVLDMIRVKR 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +E + LIGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAV Q + G+ Sbjct: 120 FMEGKKTVLIGPNCPGVITPGECKIGIMPGYIHLPGHVGVVSRSGTLTYEAVHQLTTRGI 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQS+AVGIGGDPVKG+EFID+L+ F D T +++M+GEIGG+AEEEAA++++D Sbjct: 180 GQSSAVGIGGDPVKGSEFIDILQRFNEDPNTHAVIMIGEIGGTAEEEAAEWIRDN----M 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VGF+ G TAPPG+ MGHAGA+ISGGKG A++KI ++ GI +AP+P+ +G +LV Sbjct: 236 TKPVVGFIGGVTAPPGKRMGHAGAIISGGKGTAKEKIATLEACGIKVAPTPSEMGSTLVS 295 Query: 296 LL 297 +L Sbjct: 296 VL 297 >gi|319776561|ref|YP_004139049.1| succinyl-CoA synthetase subunit alpha [Haemophilus influenzae F3047] gi|317451152|emb|CBY87385.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae F3047] Length = 293 Score = 351 bits (900), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 183/299 (61%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP S DAIIE+I+A LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPASFCKDAIIEAIDAGTQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|209965473|ref|YP_002298388.1| succinyl-CoA synthetase subunit alpha [Rhodospirillum centenum SW] gi|209958939|gb|ACI99575.1| succinyl-CoA synthetase, alpha subunit [Rhodospirillum centenum SW] Length = 290 Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 181/298 (60%), Positives = 236/298 (79%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T ++++PVF Sbjct: 1 MAVLVNKDTKVICQGFTGAQGTFHSEQAIAY-GTRMVGGVTPGKGGTT----HLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A +T ANASVIYVPP A DAI+E+I+A IPL+VCITEGIPVLDMV+VK L+ S Sbjct: 56 TVADAVAKTGANASVIYVPPPFAADAILEAIDAGIPLVVCITEGIPVLDMVKVKRALQDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TPD CKIGIMPG I R+G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GTRLIGPNCPGVITPDECKIGIMPGHIHRRGKIGIVSRSGTLTYEAVAQTTAAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT F+D L++F D T+ I+M+GEIGG AE + A+F+K+ G KKP+V Sbjct: 176 IGIGGDPVNGTSFVDALQMFAEDPETQGIIMIGEIGGDAEVKGAEFIKES---GLKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGAVISGG A+ K++A++ AG+ +A SPA +G ++++ +G Sbjct: 233 GFIAGRTAPPGRRMGHAGAVISGGNDTADFKVDALRAAGVHVADSPASLGSTMLKAMG 290 >gi|16273117|ref|NP_439353.1| succinyl-CoA synthetase subunit alpha [Haemophilus influenzae Rd KW20] gi|260581103|ref|ZP_05848924.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae RdAW] gi|1174474|sp|P45102|SUCD_HAEIN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|1574126|gb|AAC22851.1| succinyl-CoA synthetase, alpha subunit (sucD) [Haemophilus influenzae Rd KW20] gi|260092232|gb|EEW76174.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae RdAW] Length = 293 Score = 350 bits (899), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 183/299 (61%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A+VIYVP S DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGVTATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPIPGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|308488187|ref|XP_003106288.1| hypothetical protein CRE_15309 [Caenorhabditis remanei] gi|308254278|gb|EFO98230.1| hypothetical protein CRE_15309 [Caenorhabditis remanei] Length = 322 Score = 350 bits (899), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 179/293 (61%), Positives = 231/293 (78%), Gaps = 6/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+VQG TGK GTFH +Q + Y +T+VVGG++ K T G +PVF T Sbjct: 27 NLKINKDTKVIVQGFTGKQGTFHGKQMLEY-KTKVVGGVNANKAGTEHLG----LPVFKT 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA+ +T A+A+VIYVPPSGA +AI E+++AEIPL+VCITEGIP DMVRVK+RL +++ Sbjct: 82 VTEARNKTGADATVIYVPPSGAANAIEEAMDAEIPLVVCITEGIPQHDMVRVKSRLLKQN 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ D CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q G GQ+ Sbjct: 142 KTRLVGPNCPGIIASDECKIGIMPGHIHKKGCIGIVSRSGTLTYEAVHQTTQVGFGQTLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+++GEIGGSAEEEAAQFLK+ +KP+V Sbjct: 202 VGIGGDPFNGTNFIDCLQVFLEDPETKGIILIGEIGGSAEEEAAQFLKEHNSGKTRKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG TAPPGR MGHAGA+ISGGKG A DKINA++EAG+ + SPA++G S+ Sbjct: 262 SFIAGVTAPPGRRMGHAGAIISGGKGTAADKINALREAGVIVTDSPAKLGTSM 314 >gi|329124072|ref|ZP_08252619.1| succinyl-CoA synthetase subunit alpha [Haemophilus aegyptius ATCC 11116] gi|327467497|gb|EGF12995.1| succinyl-CoA synthetase subunit alpha [Haemophilus aegyptius ATCC 11116] Length = 293 Score = 350 bits (899), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 183/299 (61%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP S DAIIE+I+A LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPASFCKDAIIEAIDAGTQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|70726668|ref|YP_253582.1| succinyl-CoA synthetase subunit alpha [Staphylococcus haemolyticus JCSC1435] gi|68447392|dbj|BAE04976.1| succinyl-CoA synthetase (alpha subunit) [Staphylococcus haemolyticus JCSC1435] Length = 301 Score = 350 bits (899), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 170/295 (57%), Positives = 225/295 (76%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAKE T AN SV+YVP A D+I+E+ +A++ +++CITE IPV+DMV+VK LE Sbjct: 56 TVAEAKEETGANVSVVYVPAPFAADSILEAADADLDMVICITEHIPVVDMVKVKRYLEGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T+++VM+GEIGG+AEEEAA+++ K KP++ Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDEDTKAVVMIGEIGGTAEEEAAEWI----KANMTKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI + E G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTADEKIKTLNECGVKTADTPSEIGTTLIE 286 >gi|323489568|ref|ZP_08094795.1| succinyl-CoA synthetase subunit alpha [Planococcus donghaensis MPA1U2] gi|323396699|gb|EGA89518.1| succinyl-CoA synthetase subunit alpha [Planococcus donghaensis MPA1U2] Length = 300 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 176/297 (59%), Positives = 225/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+TKVLVQG+TG FHT+Q + Y T++V G+ P KG T G VPVF Sbjct: 1 MSVYINKDTKVLVQGITGSTALFHTKQMLEY-GTKIVAGVTPGKGGTEAEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T AN SVIYVP A DAI+E++EAE+ + +CITE IPVLDMV+V +E Sbjct: 56 TVEEAVKATGANVSVIYVPAPFAADAILEAVEAELDMAICITEHIPVLDMVKVNRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VG++SRSGTLTYEA Q S+EG+GQSTA Sbjct: 116 KTRLVGPNCPGVITPDECKIGIMPGYIHKKGHVGVVSRSGTLTYEATHQLSEEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T ++VM+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKEFNEDEDTYAVVMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAP G+ MGHAGA+ISGGKG A DKI AM EAGI +A +P+ IG +L++++ Sbjct: 232 GFIGGQTAPEGKRMGHAGAIISGGKGTAADKIKAMNEAGIEVADTPSVIGETLIKVI 288 >gi|145344592|ref|XP_001416813.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577039|gb|ABO95106.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 344 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 187/298 (62%), Positives = 232/298 (77%), Gaps = 9/298 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+VQG TGK GTFH+EQAI Y TQVVGG+ P+KG T ++N+PVF T Sbjct: 50 AVFVDKNTRVIVQGFTGKNGTFHSEQAIAY-GTQVVGGVTPRKGGTT----HLNLPVFDT 104 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 V EAKE T ANASVIYVPP A A++E+IEAE+ L+VCITEGIP DMVRVK A + +S Sbjct: 105 VREAKESTKANASVIYVPPPFAARAVMEAIEAEVELVVCITEGIPQHDMVRVKQALMSQS 164 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G VG++SRSGTLTYEAV+QT+ GLGQST Sbjct: 165 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGVVSRSGTLTYEAVYQTTVAGLGQSTC 224 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE I+M+GEIGG+AEEEAA+F++ G +KPIV Sbjct: 225 VGIGGDPFNGTNFVDCLEKFVKDPQTEGIIMIGEIGGTAEEEAAEFIRAS---GTEKPIV 281 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA+ISGGKG A DKI A++ G+ + SPA++G+++ E+ G Sbjct: 282 SFIAGLTAPPGRRMGHAGAIISGGKGSAGDKIAALERVGVRVVKSPAKMGQAMYEMFG 339 >gi|68249743|ref|YP_248855.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae 86-028NP] gi|68057942|gb|AAX88195.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae 86-028NP] Length = 293 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 183/299 (61%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG G FH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGAFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP S DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPIPGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|256080484|ref|XP_002576511.1| succinyl-CoA synthetase-related [Schistosoma mansoni] gi|238661780|emb|CAZ32748.1| succinyl-CoA synthetase-related [Schistosoma mansoni] Length = 347 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 180/300 (60%), Positives = 232/300 (77%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +IL+D TK++ QG TGK GTFH++Q + Y T++VGG+ P KG + G +PVF + Sbjct: 50 NILLDDKTKLICQGFTGKQGTFHSQQTLAY-GTKLVGGVSPGKGGSSHLG----LPVFNS 104 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE T A A+VIYVPP A AI E+I+A+IPLIVCITEGIP DM+RV+ RL E+S Sbjct: 105 VNEAKEATGATATVIYVPPPHAAAAIHEAIDAQIPLIVCITEGIPQHDMIRVRKRLSEQS 164 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPGI+ PD CKIGIMP I + G+VGI+SRSGTLTYEAVFQT+Q GLGQS Sbjct: 165 ASRLIGPNCPGIIKPDVCKIGIMPAHIHKPGTVGIVSRSGTLTYEAVFQTTQVGLGQSLC 224 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F D LE+FL D T+SI+++GEIGG +EE+AA+FLK+ +KP+V Sbjct: 225 VGIGGDPFNGTNFTDCLEVFLEDPNTKSIILLGEIGGDSEEQAAEFLKEHNTGPNRKPVV 284 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPGR MGHAGA+IS GKGGA++K+ A++ AG+ + PSPA+IG++L++ + L Sbjct: 285 SFIAGVTAPPGRRMGHAGAIISLGKGGAKEKMAALESAGVVVTPSPAQIGKTLLQAIADL 344 >gi|145631247|ref|ZP_01787020.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae R3021] gi|144983174|gb|EDJ90669.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae R3021] Length = 293 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 183/299 (61%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E A A+VIYVP S DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENMGATATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPIPGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|229844848|ref|ZP_04464986.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae 6P18H1] gi|229812229|gb|EEP47920.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae 6P18H1] Length = 293 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 183/299 (61%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPAPFCKDAIIEAIDAGIKLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPIPGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|83592548|ref|YP_426300.1| succinyl-CoA synthetase subunit alpha [Rhodospirillum rubrum ATCC 11170] gi|83575462|gb|ABC22013.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodospirillum rubrum ATCC 11170] Length = 292 Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 186/299 (62%), Positives = 231/299 (77%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV +TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG + ++++PVF Sbjct: 1 MSVLVSNDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGST----HLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A+E T NA+VIYVPP A DAI+E+I AEI L VCITEGIPVLDMV+VK L S Sbjct: 56 TVIQAREATGCNATVIYVPPPFAADAILEAINAEIELAVCITEGIPVLDMVKVKRALRGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I +G +G++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHTRGKIGVVSRSGTLTYEAVAQTTAAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT FID LE+FLAD T+ I+M+GEIGGSAEEEAA+FLK KKP+ Sbjct: 176 IGIGGDPVNGTNFIDCLEMFLADPETQGIIMIGEIGGSAEEEAAEFLKHSKI---KKPMC 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPG+ MGHAGA+ISGGKG A DK++AM+ AGI +A SP+ +G ++VE + S Sbjct: 233 GFIAGVTAPPGKRMGHAGAIISGGKGTAGDKMDAMRSAGILVADSPSALGSTMVEAMKS 291 >gi|52080212|ref|YP_079003.1| succinyl-CoA synthetase subunit alpha [Bacillus licheniformis ATCC 14580] gi|52785589|ref|YP_091418.1| succinyl-CoA synthetase subunit alpha [Bacillus licheniformis ATCC 14580] gi|319646009|ref|ZP_08000239.1| succinyl-CoA ligase subunit alpha [Bacillus sp. BT1B_CT2] gi|52003423|gb|AAU23365.1| succinyl-CoA synthetase (alpha subunit) [Bacillus licheniformis ATCC 14580] gi|52348091|gb|AAU40725.1| SucD [Bacillus licheniformis ATCC 14580] gi|317391759|gb|EFV72556.1| succinyl-CoA ligase subunit alpha [Bacillus sp. BT1B_CT2] Length = 300 Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 174/297 (58%), Positives = 228/297 (76%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+TKV+VQG+TG FHT+Q + Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVFINKDTKVIVQGITGSTALFHTKQMLEY-GTKIVGGVTPGKGGTEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T ANASVIYVP + A DAI+E+ +AE+ L++CITE IPVLDMV+VK +E Sbjct: 56 TVEEAVKQTGANASVIYVPAAFAADAIMEATDAELDLVICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S+ G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGVGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPDTHAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ GKTAPPG+ MGHAGA+ISGGKG A++KI M GI +A +P+ +G +L+++L Sbjct: 232 GFIGGKTAPPGKRMGHAGAIISGGKGTADEKIKTMNACGIEVAETPSVMGETLIKVL 288 >gi|300114966|ref|YP_003761541.1| succinyl-CoA synthetase subunit alpha [Nitrosococcus watsonii C-113] gi|299540903|gb|ADJ29220.1| succinyl-CoA synthetase, alpha subunit [Nitrosococcus watsonii C-113] Length = 291 Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 179/298 (60%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDK T+V+ QG TGK GTFH+ QA+ Y TQ+VGG+ P KG G PVF Sbjct: 1 MSILVDKQTRVICQGFTGKQGTFHSRQALEY-GTQLVGGVTPGKGGQTHLG----QPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E T ANA++IYVP + A DAI+E+ + +PLIVCITEGIPVLDM+RVKA L Sbjct: 56 TVAEAVEATGANATMIYVPAAFAADAILEAADGGVPLIVCITEGIPVLDMLRVKAALTGL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S L+GPNCPGI+TP +CKIGIMPG I + G +GI+SRSGTLTYEAV+QTSQ+GLGQST Sbjct: 116 PSYLVGPNCPGIITPGACKIGIMPGDIHQAGRIGIISRSGTLTYEAVYQTSQKGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP++G F+D L LF D TE +++VGEIGGSAEEEAA++++ KP+V Sbjct: 176 VGIGGDPIQGMSFVDCLALFEQDPQTEGVILVGEIGGSAEEEAAEYIQYHV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG AE K+ A+ AG+ IA SPA +G + + +G Sbjct: 232 AYIAGLTAPKGKRMGHAGAIISGGKGTAEGKLKALSAAGVSIAHSPAEMGACMEQAMG 289 >gi|77164233|ref|YP_342758.1| succinyl-CoA ligase, alpha subunit [Nitrosococcus oceani ATCC 19707] gi|76882547|gb|ABA57228.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nitrosococcus oceani ATCC 19707] Length = 291 Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 178/299 (59%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDK T+V+ QG TGK GTFH+ QA+ Y TQ+VGG+ P KG G PVF Sbjct: 1 MSILVDKQTRVICQGFTGKQGTFHSRQALEY-GTQLVGGVTPGKGGQTHLG----QPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E T ANA++IYVP + A DAI+E+ + +PLIVCITEGIPVLDM+RVKA L Sbjct: 56 TVAEAVEATGANATMIYVPAAFAADAILEAADGGVPLIVCITEGIPVLDMLRVKAALAGL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S L+GPNCPGI+TP +CKIGIMPG I + G +GI+SRSGTLTYEAV+QTS++GLGQST Sbjct: 116 PSYLVGPNCPGIITPGACKIGIMPGDIHQAGRIGIVSRSGTLTYEAVYQTSRKGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP++G F+D L LF D TE +++VGEIGGSAEEEAA++++ KP+V Sbjct: 176 VGIGGDPIQGMSFVDCLTLFEQDPQTEGVILVGEIGGSAEEEAAEYIQHHV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG AE K+ A+ AG+ IA SPA +G + + +G Sbjct: 232 AYIAGLTAPKGKRMGHAGAIISGGKGTAEGKLKALSAAGVSIAHSPAEMGECMEQAMGD 290 >gi|268581731|ref|XP_002645849.1| Hypothetical protein CBG07585 [Caenorhabditis briggsae] Length = 344 Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 179/295 (60%), Positives = 228/295 (77%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+VQG TGK GTFH +Q I Y +T VVGG++ K T G +PVF Sbjct: 49 NLKINKDTKVIVQGFTGKQGTFHGKQMIDY-KTNVVGGVNANKAGTQHLG----LPVFKN 103 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA+ +T A+ASVIYVP S A +AI E+++AEIPL+VCITEGIP DMVRVK+RL +++ Sbjct: 104 VTEARNKTGADASVIYVPASAAANAIEEAMDAEIPLVVCITEGIPQHDMVRVKSRLLKQN 163 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI++ D CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q G GQ+ Sbjct: 164 KTRLVGPNCPGIISADQCKIGIMPGHIHKRGCIGIVSRSGTLTYEAVHQTTQVGFGQTLC 223 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL D T+ I+++GEIGGSAEEEAAQFLKD KKP+V Sbjct: 224 VGIGGDPFNGTNFIDCLHVFLEDPETKGIILIGEIGGSAEEEAAQFLKDHNTGVNKKPVV 283 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+ISGGKG A DKINA++EAG+ + SPA++G S+ + Sbjct: 284 SFIAGVTAPPGRRMGHAGAIISGGKGTAADKINALREAGVVVTDSPAKLGTSMAK 338 >gi|75120763|sp|Q6DQL1|SUCA2_SOLLC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial; Short=SlSCoALalpha2; Flags: Precursor gi|49617539|gb|AAT67464.1| succinyl-CoA ligase alpha 2 subunit [Solanum lycopersicum] Length = 337 Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 187/297 (62%), Positives = 232/297 (78%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF T Sbjct: 43 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNT 97 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS- 120 VAEAK T ANASV+YVPP A AI+E++EAE+ L+VCITEGIP DMVRVKA L+K Sbjct: 98 VAEAKVETKANASVVYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALKKQL 157 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 158 RTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTC 217 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+AD TE IV++GEIGG+AEE+AA +K+ G +KP+V Sbjct: 218 VGIGGDPFNGTNFVDCLERFIADPQTEGIVLIGEIGGTAEEDAAALIKES---GTQKPVV 274 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DKI A+KEAG+ + SPA+IG +++++ Sbjct: 275 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALKEAGVTVCESPAKIGVTMLDVF 331 >gi|310641534|ref|YP_003946292.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Paenibacillus polymyxa SC2] gi|309246484|gb|ADO56051.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Paenibacillus polymyxa SC2] Length = 309 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 175/302 (57%), Positives = 228/302 (75%), Gaps = 10/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGST-----YWTGGNVN 55 MSILVDK+TKV+ QG+TGK FH + A+ Y TQ+VGG P KG T G V Sbjct: 1 MSILVDKHTKVITQGITGKTALFHAKGALDY-GTQMVGGTSPGKGGTEVEITLENGQQVK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV+EAKE T A ASVIYVPP+ A D+I+E+++AE+ L++CITEGIPVLDM++VK Sbjct: 60 LPVFNTVSEAKEATGATASVIYVPPAFAADSILEAVDAELDLVICITEGIPVLDMIKVKR 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +E + LIGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAV Q + G+ Sbjct: 120 FMEGKKTVLIGPNCPGVITPGECKIGIMPGYIHLPGHVGVVSRSGTLTYEAVHQLTTRGI 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQS+AVGIGGDPVKG+EFID+L F D T +++M+GEIGG+AEEEAA++++D Sbjct: 180 GQSSAVGIGGDPVKGSEFIDILHRFNEDPNTHAVIMIGEIGGTAEEEAAEWIRDN----M 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VGF+ G TAPPG+ MGHAGA+ISGGKG A++KI ++ GI +AP+P+ +G +LV Sbjct: 236 TKPVVGFIGGVTAPPGKRMGHAGAIISGGKGTAKEKIATLEACGIKVAPTPSEMGSTLVS 295 Query: 296 LL 297 +L Sbjct: 296 VL 297 >gi|309362784|emb|CAP27541.2| hypothetical protein CBG_07585 [Caenorhabditis briggsae AF16] Length = 322 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 179/297 (60%), Positives = 228/297 (76%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+VQG TGK GTFH +Q I Y +T VVGG++ K T G +PVF Sbjct: 27 NLKINKDTKVIVQGFTGKQGTFHGKQMIDY-KTNVVGGVNANKAGTQHLG----LPVFKN 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA+ +T A+ASVIYVP S A +AI E+++AEIPL+VCITEGIP DMVRVK+RL +++ Sbjct: 82 VTEARNKTGADASVIYVPASAAANAIEEAMDAEIPLVVCITEGIPQHDMVRVKSRLLKQN 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI++ D CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q G GQ+ Sbjct: 142 KTRLVGPNCPGIISADQCKIGIMPGHIHKRGCIGIVSRSGTLTYEAVHQTTQVGFGQTLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL D T+ I+++GEIGGSAEEEAAQFLKD KKP+V Sbjct: 202 VGIGGDPFNGTNFIDCLHVFLEDPETKGIILIGEIGGSAEEEAAQFLKDHNTGVNKKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKG A DKINA++EAG+ + SPA++G S+ + Sbjct: 262 SFIAGVTAPPGRRMGHAGAIISGGKGTAADKINALREAGVVVTDSPAKLGTSMAKAF 318 >gi|223044245|ref|ZP_03614282.1| succinate-CoA ligase, alpha subunit subfamily [Staphylococcus capitis SK14] gi|222442395|gb|EEE48503.1| succinate-CoA ligase, alpha subunit subfamily [Staphylococcus capitis SK14] Length = 302 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 170/295 (57%), Positives = 223/295 (75%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T AN SV+YVP A D+I+E+ EAE+ +++CITE IPV+DMV+VK L+ Sbjct: 56 TVEEAKNETGANVSVVYVPAPFAADSILEAAEAELDMVICITEHIPVVDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T+++VM+GEIGG+AEEEAAQ++KD KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKEFNEDPETKAVVMIGEIGGTAEEEAAQWIKDN----MNKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI + + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTADEKIKTLNDCGVETADTPSEIGTTLIE 286 >gi|154686026|ref|YP_001421187.1| succinyl-CoA synthetase subunit alpha [Bacillus amyloliquefaciens FZB42] gi|154351877|gb|ABS73956.1| SucD [Bacillus amyloliquefaciens FZB42] gi|328553495|gb|AEB23987.1| succinyl-CoA synthetase subunit alpha [Bacillus amyloliquefaciens TA208] gi|328911713|gb|AEB63309.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus amyloliquefaciens LL3] Length = 300 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 174/297 (58%), Positives = 226/297 (76%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+T+V+VQG+TG FHT+Q + Y T +VGG+ P KG T G VPVF Sbjct: 1 MSVFINKDTRVIVQGITGSTALFHTKQMLEY-GTNIVGGVTPGKGGTEAEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A+ASVIYVP A DAI+E+++AEI L++CITE IPVLDMV+VK +E Sbjct: 56 TVAEAVHTTGADASVIYVPAPFAADAIMEAVDAEIDLVICITEHIPVLDMVKVKRFMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S+ G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGVGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPETHAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ GKTAPPG+ MGHAGA+ISGGKG AE+K+ M GI +A +P+ +G +L+++L Sbjct: 232 GFIGGKTAPPGKRMGHAGAIISGGKGTAEEKVKTMNACGIEVAETPSVMGETLIKVL 288 >gi|145641203|ref|ZP_01796783.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae R3021] gi|145274040|gb|EDK13906.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae 22.4-21] Length = 293 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 182/299 (60%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGSSHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP S D IIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPASFCKDVIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVICVKSLAEIGEALRKLLKS 290 >gi|78485717|ref|YP_391642.1| succinyl-CoA synthetase, alpha subunit [Thiomicrospira crunogena XCL-2] gi|78364003|gb|ABB41968.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Thiomicrospira crunogena XCL-2] Length = 293 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 179/302 (59%), Positives = 229/302 (75%), Gaps = 13/302 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+NTKV+ QG TGK GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDQNTKVICQGFTGKQGTFHSEQAIAY-GTKMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A AS+IYVPP+ A D+IIE+I+A I +I CITEGIPV DM++V+A LEKS Sbjct: 56 TVKEAVTQTGAEASMIYVPPAFAADSIIEAIDAGIKVITCITEGIPVNDMLKVRAVLEKS 115 Query: 121 SSRLIGPNCPGILTPDS----CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + LIGPNCPG++TP + CKIGIMPG I G VGI+SRSGTLTYEAV QT+Q GLG Sbjct: 116 DAFLIGPNCPGLITPGNDKKGCKIGIMPGHIHLPGKVGIVSRSGTLTYEAVHQTTQNGLG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QST VGIGGDP++G +FID L LF ADE T+ I++VGEIGG AEE+AA+++K Sbjct: 176 QSTCVGIGGDPIQGMDFIDCLRLFQADEQTQGIILVGEIGGQAEEDAAEYIKQHV----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V ++AG TAP G+ MGHAGA++SGGKG AE K A++ AG+ + SPA +G ++++L Sbjct: 232 KPVVAYIAGVTAPAGKRMGHAGAIVSGGKGTAEAKFTALESAGVTVVRSPADLGAAMLDL 291 Query: 297 LG 298 +G Sbjct: 292 IG 293 >gi|90580057|ref|ZP_01235865.1| succinyl-CoA synthetase alpha subunit [Vibrio angustum S14] gi|90438942|gb|EAS64125.1| succinyl-CoA synthetase alpha subunit [Vibrio angustum S14] Length = 290 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 181/296 (61%), Positives = 225/296 (76%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIEY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP LDM+ VK RL+++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTLDMLDVKVRLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKAGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D ATE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPATEAIVMIGEIGGTAEEEAAAYIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++EAG+ S A IG++L E+ Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEEAGVKTVKSLADIGKALREV 287 >gi|229541103|ref|ZP_04430163.1| succinyl-CoA synthetase, alpha subunit [Bacillus coagulans 36D1] gi|229325523|gb|EEN91198.1| succinyl-CoA synthetase, alpha subunit [Bacillus coagulans 36D1] Length = 300 Score = 349 bits (895), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 178/297 (59%), Positives = 225/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI V+K+TKV+VQG+TGK FHT+Q + Y T++VGG P KG T G VPVF Sbjct: 1 MSIYVNKDTKVIVQGITGKTALFHTKQCLEY-GTKIVGGTSPGKGGTEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A SVIYVP A DAI+E+++AE+ L++CITE IPVLDMV+VK +E Sbjct: 56 TVKEAVEKTGATVSVIYVPAPFAADAIMEAVDAELDLVICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TPD CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++ G+GQ+ A Sbjct: 116 KTRLIGPNCPGIITPDECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTRAGIGQTGA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT FIDVL+ F D TE+++M+GEIGG+AEEEAA++++ KKP+V Sbjct: 176 IGIGGDPVNGTNFIDVLKEFNNDPETEAVIMIGEIGGTAEEEAAKWVQANM----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G TAPPG+ MGHAGA+ISGGKG A +KI M E GI +A +PA IG +LV +L Sbjct: 232 GFIGGVTAPPGKRMGHAGAIISGGKGTAAEKIRTMNECGIQVAETPAVIGETLVRVL 288 >gi|146328935|ref|YP_001210179.1| succinyl-CoA synthetase, alpha subunit [Dichelobacter nodosus VCS1703A] gi|146232405|gb|ABQ13383.1| succinyl-CoA synthetase, alpha subunit [Dichelobacter nodosus VCS1703A] Length = 290 Score = 349 bits (895), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 180/299 (60%), Positives = 221/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI VDKNT+V+ QG TG GTFH+EQAI Y TQ++GG+ P KG +++ PVF Sbjct: 1 MSIYVDKNTRVITQGFTGSQGTFHSEQAIAY-GTQLLGGVTPNKGGET----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 EA T ANAS+I+VPP A DAI+E+I+A I I CITEGIPVLDM++VKA L+ + Sbjct: 56 NCYEAVCATKANASMIFVPPPFAADAILEAIDAGIETIACITEGIPVLDMLKVKAALKGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + RLIGPNCPGI+TPD CK+GIMP I +KGS+GI+SRSGTLTYEAV QT+Q G GQST Sbjct: 116 NVRLIGPNCPGIITPDECKMGIMPAHIHQKGSIGIVSRSGTLTYEAVHQTTQSGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVL F DE T +IVM+GEIGGSAEEEAA+F+K KKP+V Sbjct: 176 VGIGGDPICGTRFIDVLSAFEQDEQTRAIVMIGEIGGSAEEEAAEFIKSCI----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG+TAP G+ MGHAGA+I G G A KI A++ AG+ SPA IG +L +LL S Sbjct: 232 AYIAGRTAPLGKRMGHAGAIIKGNMGSAAAKIKALQNAGVVTVSSPAEIGAALKQLLHS 290 >gi|89073523|ref|ZP_01160046.1| succinyl-CoA synthetase alpha subunit [Photobacterium sp. SKA34] gi|89050787|gb|EAR56268.1| succinyl-CoA synthetase alpha subunit [Photobacterium sp. SKA34] Length = 290 Score = 349 bits (895), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 181/296 (61%), Positives = 225/296 (76%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIDY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP LDM+ VK RL+++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTLDMLDVKVRLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKAGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D ATE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPATEAIVMIGEIGGTAEEEAASYIKESV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++EAG+ S A IG++L E+ Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEEAGVKTVKSLADIGKALREV 287 >gi|145633073|ref|ZP_01788805.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae 3655] gi|144986299|gb|EDJ92878.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae 3655] Length = 293 Score = 349 bits (895), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 182/299 (60%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG G FH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGAFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP S DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L ++L S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGAALRKVLKS 290 >gi|224120514|ref|XP_002318347.1| predicted protein [Populus trichocarpa] gi|222859020|gb|EEE96567.1| predicted protein [Populus trichocarpa] Length = 293 Score = 348 bits (894), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 186/296 (62%), Positives = 231/296 (78%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF TV Sbjct: 1 VFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNTV 55 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 AEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMVRVKA L + S Sbjct: 56 AEAKAETKANASVIYVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSK 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G VGI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 116 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D +E FLAD TE I+++GEIGG+AEE+AA +K+ G +KP+V Sbjct: 176 GIGGDPFNGTNFVDCIEKFLADSQTEGIILIGEIGGTAEEDAAALIKES---GTEKPVVA 232 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAPPGR MGHAGA++SGGKG A+DKI ++EAG+ + SPA+IG +++++ Sbjct: 233 FIAGQTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVAMLDVF 288 >gi|319897337|ref|YP_004135533.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae F3031] gi|317432842|emb|CBY81207.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae F3031] Length = 293 Score = 348 bits (894), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 183/299 (61%), Positives = 221/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAIENTGATATVIYVPAPFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVGKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|311068131|ref|YP_003973054.1| succinyl-CoA synthetase subunit alpha [Bacillus atrophaeus 1942] gi|310868648|gb|ADP32123.1| succinyl-CoA synthetase subunit alpha [Bacillus atrophaeus 1942] Length = 300 Score = 348 bits (894), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 227/297 (76%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ V+K+T+V+VQG+TG FHT+Q + Y T +VGG+ P KG T G VPVF Sbjct: 1 MSVFVNKDTRVIVQGITGSTALFHTKQMLEY-GTNIVGGVTPGKGGTEAEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A T ANASVIYVP + A DAI+E+++AE+ L++CITE IPVLDMV+VK +E Sbjct: 56 TVADAVHTTGANASVIYVPAAFAADAIMEAVDAELDLVICITEHIPVLDMVKVKRFMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S+ G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGVGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPETHAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ GKTAPPG+ MGHAGA+ISGGKG A++KI + GI +A +P+ +G +L+++L Sbjct: 232 GFIGGKTAPPGKRMGHAGAIISGGKGTADEKIKTLNACGIEVAETPSVMGETLIKVL 288 >gi|224476372|ref|YP_002633978.1| succinyl-CoA synthetase subunit alpha [Staphylococcus carnosus subsp. carnosus TM300] gi|222420979|emb|CAL27793.1| putative succinyl-CoA synthetase, alpha chain [Staphylococcus carnosus subsp. carnosus TM300] Length = 304 Score = 348 bits (894), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 172/295 (58%), Positives = 222/295 (75%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ VDKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPVF Sbjct: 1 MSVYVDKNTKVIVQGITGSTALFHTKQMLEY-GTQIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAKE T AN SVIYVP A DAI+E +A++ L +CITE IPVLDMV+V LE Sbjct: 56 TVEEAKEETGANVSVIYVPAPFAADAILECADADLDLAICITEHIPVLDMVKVVRYLEDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPG+++PD CKIGIMPG I ++G VG++SRSGTLTYEAV Q ++EG+GQS+A Sbjct: 116 NTRLIGPNCPGVISPDDCKIGIMPGYIHKRGHVGVVSRSGTLTYEAVHQLTEEGIGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T+++VM+GEIGG+AEEEAA+++ + KP++ Sbjct: 176 VGIGGDPVNGTNFIDVLDAFNKDPETKAVVMIGEIGGTAEEEAAEWI----NKNMTKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI + E G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAKEKIKTLNENGVKTADTPSEIGSTLIE 286 >gi|332976752|gb|EGK13583.1| succinyl-CoA synthetase subunit alpha [Desmospora sp. 8437] Length = 310 Score = 348 bits (893), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 176/302 (58%), Positives = 228/302 (75%), Gaps = 10/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTY----WTGGNV-N 55 MSI ++K+TKV+ QG+TGK G FHT+ + Y TQ+V G P KG T G + + Sbjct: 1 MSIFINKDTKVITQGITGKTGLFHTKGGLEY-GTQMVAGAVPGKGGTQVEITLDNGEIKS 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TVAEAKE+T ANASVIYVPP+ A DAI+E+++A++ L++CITEGIPV+DMV+V Sbjct: 60 VPVFDTVAEAKEKTGANASVIYVPPAFAADAIMEAVDADLDLVICITEGIPVMDMVKVNR 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +E +RLIGPNCPG++TP KIGIMPG I G VG++SRSGTLTYEAV Q +Q G+ Sbjct: 120 YMEGKRTRLIGPNCPGVITPGESKIGIMPGYIHTPGRVGVVSRSGTLTYEAVHQLTQRGI 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQSTAVGIGGDPV GT FIDVLE F D T +++M+GEIGG+AEEEAA ++ K Sbjct: 180 GQSTAVGIGGDPVNGTNFIDVLEQFQQDPDTSAVIMIGEIGGTAEEEAADWI----KANM 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VGF+ G+TAPPG+ MGHAGA+ISGGKG A++K+ ++ G+ +AP+PA IG +LV Sbjct: 236 TKPVVGFIGGQTAPPGKRMGHAGAIISGGKGTAKEKVAKLEACGVAVAPTPADIGETLVR 295 Query: 296 LL 297 +L Sbjct: 296 VL 297 >gi|16078673|ref|NP_389492.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. subtilis str. 168] gi|221309485|ref|ZP_03591332.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. subtilis str. 168] gi|221313810|ref|ZP_03595615.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318734|ref|ZP_03600028.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. subtilis str. JH642] gi|221323005|ref|ZP_03604299.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. subtilis str. SMY] gi|321315376|ref|YP_004207663.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis BSn5] gi|3915596|sp|P80865|SUCD_BACSU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; AltName: Full=Vegetative protein 239; Short=VEG239 gi|2462968|emb|CAA04420.1| putative succinyl-coA synthetase alpha chain [Bacillus subtilis subsp. subtilis str. 168] gi|2633982|emb|CAB13483.1| succinyl-CoA synthetase (alpha subunit) [Bacillus subtilis subsp. subtilis str. 168] gi|291484161|dbj|BAI85236.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. natto BEST195] gi|320021650|gb|ADV96636.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis BSn5] Length = 300 Score = 348 bits (893), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 227/297 (76%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+T+V+VQG+TG FHT+Q + Y T +VGG+ P KG T G VPVF Sbjct: 1 MSVFINKDTRVIVQGITGSTALFHTKQMLEY-GTNIVGGVTPGKGGTEAEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + T ANASVIYVP A DAI+E+++AE+ L++CITE IPVLDMV+VK +E Sbjct: 56 TVAEAVQTTGANASVIYVPAPFAADAIMEAVDAELDLVICITEHIPVLDMVKVKRFMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S+ G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGVGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPDTHAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ GKTAPPG+ MGHAGA+ISGGKG A++KI + GI +A +P+ +G +L+++L Sbjct: 232 GFIGGKTAPPGKRMGHAGAIISGGKGTADEKIKTLNACGIEVAETPSVMGETLIKVL 288 >gi|228474944|ref|ZP_04059672.1| succinate-CoA ligase, alpha subunit family [Staphylococcus hominis SK119] gi|314936591|ref|ZP_07843938.1| succinyl-CoA synthase, alpha subunit [Staphylococcus hominis subsp. hominis C80] gi|228270929|gb|EEK12317.1| succinate-CoA ligase, alpha subunit family [Staphylococcus hominis SK119] gi|313655210|gb|EFS18955.1| succinyl-CoA synthase, alpha subunit [Staphylococcus hominis subsp. hominis C80] Length = 301 Score = 348 bits (893), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 170/295 (57%), Positives = 223/295 (75%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M + +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MGVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK+ T AN SV+YVP A D+I+E+ +AE+ +++CITE IPV+DM++VK LE Sbjct: 56 TVAEAKKETGANVSVVYVPAPFAADSILEAADAELDMVICITEHIPVVDMIKVKRYLEDR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T+++VM+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDEETKAVVMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GFV G+TAPPG+ MGHAGA+ISGGKG A +KI + E G+ A +P+ IG +L+E Sbjct: 232 GFVGGQTAPPGKRMGHAGAIISGGKGTAAEKIKTLNECGVKTADTPSEIGTTLIE 286 >gi|240949390|ref|ZP_04753731.1| hypothetical protein AM305_10616 [Actinobacillus minor NM305] gi|240296139|gb|EER46795.1| hypothetical protein AM305_10616 [Actinobacillus minor NM305] Length = 290 Score = 348 bits (893), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 176/299 (58%), Positives = 224/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGAQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP G DAI+E+I+A I LIVCITEGIP LDM+ +K +L ++ Sbjct: 56 TVREAVETTQATATVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMLEIKQKLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP+ CKIGIMP +I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPEECKIGIMPANIHKKGKIGIISRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L LF D TE+IVM+GEIGGSAEEEAA+F++ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILRLFEQDPETEAIVMIGEIGGSAEEEAAEFIRKHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S A IG +L +++ S Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEAAGVTTVRSLADIGSALRKVMKS 290 >gi|257464604|ref|ZP_05628975.1| hypothetical protein AM202_05095 [Actinobacillus minor 202] gi|257450264|gb|EEV24307.1| hypothetical protein AM202_05095 [Actinobacillus minor 202] Length = 289 Score = 348 bits (893), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 176/297 (59%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGAQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP G DAI+E+I+A I LIVCITEGIP LDM+ +K +L ++ Sbjct: 56 TVREAVEATQATATVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMLEIKQKLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP+ CKIGIMP +I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPEECKIGIMPANIHKKGKIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L LF D TE+IVM+GEIGGSAEEEAA+F++ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILRLFEQDPETEAIVMIGEIGGSAEEEAAEFIRKHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEAAGVTTVRSLAEIGSALKRVL 288 >gi|304404234|ref|ZP_07385896.1| succinyl-CoA synthetase, alpha subunit [Paenibacillus curdlanolyticus YK9] gi|304347212|gb|EFM13044.1| succinyl-CoA synthetase, alpha subunit [Paenibacillus curdlanolyticus YK9] Length = 310 Score = 348 bits (892), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 174/302 (57%), Positives = 227/302 (75%), Gaps = 10/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGST-----YWTGGNVN 55 MSIL++K+TKV+ QG+TGK FH + A+ Y TQ+VGG P KG T G + Sbjct: 1 MSILINKDTKVITQGITGKTALFHAKGALDY-GTQMVGGTSPGKGGTTVEIALENGSTAS 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV EA T A ASVIYVPP+ A DAI+E+++AE+ +++CITEGIPVLDMV+V+ Sbjct: 60 LPVFNTVTEAVAATGATASVIYVPPAFAADAILEAVDAELEIVICITEGIPVLDMVKVQR 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 LE +RLIGPNCPG++TPD CKIGIMPG I KG VG++SRSGTLTYEAV Q + G+ Sbjct: 120 YLEGKKTRLIGPNCPGLITPDECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLTTRGI 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQS+AVGIGGDPVKGTEFIDVL +F D T +++M+GEIGG+AEEEAA+++ K Sbjct: 180 GQSSAVGIGGDPVKGTEFIDVLNMFNEDPDTYAVIMIGEIGGTAEEEAAEWI----KANM 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+ G TAP G+ MGHAGA+ISGGKG A +KI ++ G+ ++P+P+ +G +LV Sbjct: 236 KKPVVGFIGGATAPEGKRMGHAGAIISGGKGTAAEKIATLEACGVKVSPTPSEMGSTLVS 295 Query: 296 LL 297 +L Sbjct: 296 VL 297 >gi|15602146|ref|NP_245218.1| hypothetical protein PM0281 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720513|gb|AAK02365.1| SucD [Pasteurella multocida subsp. multocida str. Pm70] Length = 289 Score = 348 bits (892), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 178/297 (59%), Positives = 225/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A ASVIYVP G DAI+E+I+A I L++CITEGIP LDM++VK RL ++ Sbjct: 56 TVRDAVDATGATASVIYVPAPGCKDAILEAIDAGIQLVICITEGIPTLDMLQVKQRLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP+ CKIGIMPG+I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPEECKIGIMPGNIHKKGKIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQDDPQTEAIVMIGEIGGSAEEEAAAFIKDYV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S A IG +L LL Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEAAGVKTVRSLAEIGAALKALL 288 >gi|145639283|ref|ZP_01794889.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae PittII] gi|145271586|gb|EDK11497.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae PittII] Length = 293 Score = 348 bits (892), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 182/299 (60%), Positives = 221/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VG + P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGVVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP S DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEE A F+KD KP+V Sbjct: 176 VGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEVAIFIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|319790380|ref|YP_004152013.1| succinyl-CoA synthetase, alpha subunit [Thermovibrio ammonificans HB-1] gi|317114882|gb|ADU97372.1| succinyl-CoA synthetase, alpha subunit [Thermovibrio ammonificans HB-1] Length = 300 Score = 348 bits (892), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 173/299 (57%), Positives = 225/299 (75%), Gaps = 7/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--GNVNVPV 58 MS+L+DKNTKV+VQGLTGK G+FH +Q + Y TQ+V G+ P KG WT G VPV Sbjct: 1 MSVLIDKNTKVVVQGLTGKEGSFHAKQCLDY-GTQIVAGVTPGKGGMTWTDDEGKYKVPV 59 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV EA + T ANAS+I+VPP+ A DAI+E+ +A I LIVCITEGIPV DMV+VK LE Sbjct: 60 FNTVEEAVKETGANASLIFVPPAFAADAIMEAADAGIKLIVCITEGIPVNDMVKVKRALE 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + R +GPNCPG++TP+ CK+GIMPG IF+KG VGI+SRSGTLTYEA +Q + G+GQS Sbjct: 120 GTGVRYVGPNCPGVITPEECKMGIMPGHIFKKGRVGIVSRSGTLTYEAAYQLTSRGIGQS 179 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDPV GT + +E+F D T++IV++GEIGG+ EEEAA+++K+ KKP Sbjct: 180 TVIGIGGDPVPGTTHREAVEMFNNDPETDAIVLIGEIGGTMEEEAAEYIKEHV----KKP 235 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +V ++AG TAPPGR MGHAGA+ISGGKG A+ K+ A++EAG + +PA IG + + L Sbjct: 236 VVAYIAGVTAPPGRRMGHAGAIISGGKGDAKSKMEALREAGAYVCNTPAEIGEMVEKAL 294 >gi|159469921|ref|XP_001693108.1| succinyl-coa ligase alpha chain [Chlamydomonas reinhardtii] gi|159469923|ref|XP_001693109.1| succinyl-CoA ligase [Chlamydomonas reinhardtii] gi|158277366|gb|EDP03134.1| succinyl-coa ligase alpha chain [Chlamydomonas reinhardtii] gi|158277367|gb|EDP03135.1| succinyl-CoA ligase [Chlamydomonas reinhardtii] Length = 329 Score = 347 bits (891), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 186/297 (62%), Positives = 231/297 (77%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNTKV+ QGLTGK GTFHTEQAI Y TQ+VGG+ PKKG T G +PVF T Sbjct: 35 AVFVDKNTKVICQGLTGKNGTFHTEQAIAY-GTQMVGGVTPKKGGTSHLG----LPVFNT 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEAK T +A+VIYVPP A AI+E++EAE+ L+VCITEGIP DMVRVK ++ ++ Sbjct: 90 VAEAKAATGCHATVIYVPPPFAAKAILEAVEAELELVVCITEGIPQHDMVRVKKAMQGQT 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I G +GI+SRSGTLTYEAVFQT+ +GLGQST Sbjct: 150 KTRLIGPNCPGIIKPGECKIGIMPGYIHTPGKIGIVSRSGTLTYEAVFQTTNQGLGQSTV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE I+M+GEIGG+AEEEAA+F++ K G KKP+V Sbjct: 210 VGIGGDPFNGTNFVDCLERFVKDPQTEGIIMIGEIGGTAEEEAAEFIR---KSGTKKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKG A DKI A++EAG+ + SPA++G +++ ++ Sbjct: 267 SFIAGLTAPPGRRMGHAGAIISGGKGTATDKIKALEEAGVTVTRSPAQMGVTMMRVM 323 >gi|147673983|ref|YP_001217609.1| succinyl-CoA synthetase subunit alpha [Vibrio cholerae O395] gi|262167703|ref|ZP_06035406.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae RC27] gi|146315866|gb|ABQ20405.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae O395] gi|227013981|gb|ACP10191.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae O395] gi|262023908|gb|EEY42606.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae RC27] Length = 290 Score = 347 bits (891), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 181/298 (60%), Positives = 224/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAITY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTTDMIDVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D ATE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPATEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AE+K A++ AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAALESAGVKTVKSLADIGKALREVTG 289 >gi|15642084|ref|NP_231716.1| succinyl-CoA synthetase subunit alpha [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586942|ref|ZP_01676722.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae 2740-80] gi|121727400|ref|ZP_01680539.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae V52] gi|153213721|ref|ZP_01948973.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae 1587] gi|153818378|ref|ZP_01971045.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae NCTC 8457] gi|153821693|ref|ZP_01974360.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae B33] gi|153826097|ref|ZP_01978764.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae MZO-2] gi|153828884|ref|ZP_01981551.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae 623-39] gi|227082210|ref|YP_002810761.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae M66-2] gi|229507827|ref|ZP_04397332.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae BX 330286] gi|229511936|ref|ZP_04401415.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae B33] gi|229513739|ref|ZP_04403201.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae TMA 21] gi|229519072|ref|ZP_04408515.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae RC9] gi|229522041|ref|ZP_04411458.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae TM 11079-80] gi|229528900|ref|ZP_04418290.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae 12129(1)] gi|229607372|ref|YP_002878020.1| succinyl-CoA synthetase subunit alpha [Vibrio cholerae MJ-1236] gi|254226087|ref|ZP_04919685.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae V51] gi|254286799|ref|ZP_04961752.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae AM-19226] gi|254849170|ref|ZP_05238520.1| succinyl-CoA synthase [Vibrio cholerae MO10] gi|255745173|ref|ZP_05419122.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholera CIRS 101] gi|258621149|ref|ZP_05716183.1| succinyl-CoA synthetase alpha subunit [Vibrio mimicus VM573] gi|261210013|ref|ZP_05924312.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio sp. RC341] gi|262155969|ref|ZP_06029090.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae INDRE 91/1] gi|262166194|ref|ZP_06033931.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio mimicus VM223] gi|262191356|ref|ZP_06049547.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae CT 5369-93] gi|262404434|ref|ZP_06080989.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio sp. RC586] gi|297579588|ref|ZP_06941516.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae RC385] gi|298497890|ref|ZP_07007697.1| succinyl-CoA synthetase subunit alpha [Vibrio cholerae MAK 757] gi|9656632|gb|AAF95230.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548878|gb|EAX58921.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae 2740-80] gi|121630292|gb|EAX62690.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae V52] gi|124115782|gb|EAY34602.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae 1587] gi|125621399|gb|EAZ49735.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae V51] gi|126511068|gb|EAZ73662.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae NCTC 8457] gi|126520791|gb|EAZ78014.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae B33] gi|148875590|gb|EDL73725.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae 623-39] gi|149740214|gb|EDM54367.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae MZO-2] gi|150423090|gb|EDN15038.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae AM-19226] gi|227010098|gb|ACP06310.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae M66-2] gi|229332674|gb|EEN98160.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae 12129(1)] gi|229340966|gb|EEO05971.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae TM 11079-80] gi|229343761|gb|EEO08736.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae RC9] gi|229348920|gb|EEO13877.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae TMA 21] gi|229351901|gb|EEO16842.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae B33] gi|229355332|gb|EEO20253.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae BX 330286] gi|229370027|gb|ACQ60450.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae MJ-1236] gi|254844875|gb|EET23289.1| succinyl-CoA synthase [Vibrio cholerae MO10] gi|255737003|gb|EET92399.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholera CIRS 101] gi|258586537|gb|EEW11252.1| succinyl-CoA synthetase alpha subunit [Vibrio mimicus VM573] gi|260840959|gb|EEX67496.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio sp. RC341] gi|262025910|gb|EEY44578.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio mimicus VM223] gi|262030280|gb|EEY48923.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae INDRE 91/1] gi|262032775|gb|EEY51322.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae CT 5369-93] gi|262349466|gb|EEY98604.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio sp. RC586] gi|297537182|gb|EFH76015.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae RC385] gi|297542223|gb|EFH78273.1| succinyl-CoA synthetase subunit alpha [Vibrio cholerae MAK 757] gi|327484616|gb|AEA79023.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae LMA3894-4] Length = 290 Score = 347 bits (891), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 181/298 (60%), Positives = 224/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTTDMIDVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D ATE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPATEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AE+K A++ AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAALESAGVKTVKSLADIGKALREVTG 289 >gi|308173572|ref|YP_003920277.1| succinyl-CoA synthetase subunit alpha [Bacillus amyloliquefaciens DSM 7] gi|307606436|emb|CBI42807.1| succinyl-CoA synthetase (alpha subunit) [Bacillus amyloliquefaciens DSM 7] Length = 300 Score = 347 bits (891), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 226/297 (76%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+T+V+VQG+TG FHT+Q + Y T +VGG+ P KG T G VPVF Sbjct: 1 MSVFINKDTRVIVQGITGSTALFHTKQMLEY-GTNIVGGVTPGKGGTEAEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A+ASVIYVP A DAI+E+++A+I L++CITE IPVLDMV+VK +E Sbjct: 56 TVAEAVHTTGADASVIYVPAPFAADAIMEAVDAKIDLVICITEHIPVLDMVKVKRFMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S+ G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGVGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPETHAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ GKTAPPG+ MGHAGA+ISGGKG AE+K+ M GI +A +P+ +G +L+++L Sbjct: 232 GFIGGKTAPPGKRMGHAGAIISGGKGTAEEKVKTMNACGIEVAETPSVMGETLIKVL 288 >gi|89098657|ref|ZP_01171539.1| succinyl-CoA synthetase alpha subunit [Bacillus sp. NRRL B-14911] gi|89086619|gb|EAR65738.1| succinyl-CoA synthetase alpha subunit [Bacillus sp. NRRL B-14911] Length = 300 Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 225/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+TKV+VQG+TG FHT+Q + Y TQ+VGG P KG G VPVF Sbjct: 1 MSVFINKDTKVIVQGITGSTALFHTKQMLEY-GTQIVGGTTPGKGGMEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP + A DAI+E+++AE+ L +CITE IPVLDMV+VK +E Sbjct: 56 TVQEAVKETGATASVIYVPAAFAADAILEAVDAELDLAICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I KG VG++SRSGTLTYEAV Q +Q G+GQSTA Sbjct: 116 KTRLVGPNCPGVITPDECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLTQAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T++++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPETKAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI M E GI +A +P+ +G +L+++L Sbjct: 232 GFIGGRTAPPGKRMGHAGAIISGGKGTADEKIRVMNECGIQVADTPSVMGETLIKVL 288 >gi|307170861|gb|EFN62972.1| Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Camponotus floridanus] Length = 333 Score = 347 bits (889), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 184/300 (61%), Positives = 232/300 (77%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +D NTKV+ QG TGK GTFH +QAI Y T++VGG+ PKK T G PVF T Sbjct: 34 NLKIDANTKVICQGFTGKQGTFHCQQAIDY-GTKIVGGVSPKKAGTEHLGK----PVFKT 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE T A+ASVIYVPP A AI+ESI+AE+PLIVCITEGIP DMV+VK RL E++ Sbjct: 89 VKEAKEATGASASVIYVPPPAAASAIMESIDAEMPLIVCITEGIPQHDMVKVKRRLLEQN 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 149 KSRLIGPNCPGIIAPEQCKIGIMPGHIHQKGKIGIVSRSGTLTYEAVNQTTLTGLGQTLC 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID L++FL D + I+M+GEIGGSAEE AA++L ++ G+ KP+V Sbjct: 209 VGIGGDPFNGTDFIDCLDVFLTDPECDGIIMIGEIGGSAEELAAEYLIEKNTGGKAKPVV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPGR MGHAGA+ISGG+GGA+DKINA+++AG+ + SPA++G L++ + L Sbjct: 269 SFIAGITAPPGRRMGHAGAIISGGRGGAQDKINALEKAGVIVTRSPAQMGNELLKEMTRL 328 >gi|296330825|ref|ZP_06873300.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674343|ref|YP_003866015.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. spizizenii str. W23] gi|296151830|gb|EFG92704.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412587|gb|ADM37706.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. spizizenii str. W23] Length = 300 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 226/297 (76%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+T+V+VQG+TG FHT+Q + Y T +VGG+ P KG T G VPVF Sbjct: 1 MSVFINKDTRVIVQGITGSTALFHTKQMLEY-GTNIVGGVTPGKGGTEAEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + T ANASVIYVP A DAI+E+++AE+ L++CITE IPVLDMV+VK +E Sbjct: 56 TVAEAVQTTGANASVIYVPAPFAADAIMEAVDAELDLVICITEHIPVLDMVKVKRFMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S+ G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGVGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID L+ F D T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDALKAFNEDPDTHAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ GKTAPPG+ MGHAGA+ISGGKG A++KI + GI +A +P+ +G +L+++L Sbjct: 232 GFIGGKTAPPGKRMGHAGAIISGGKGTADEKIKTLNACGIEVAETPSVMGETLIKVL 288 >gi|260914170|ref|ZP_05920643.1| succinyl-CoA synthetase subunit alpha [Pasteurella dagmatis ATCC 43325] gi|260631803|gb|EEX49981.1| succinyl-CoA synthetase subunit alpha [Pasteurella dagmatis ATCC 43325] Length = 289 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 177/297 (59%), Positives = 225/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A A+VIYVP G DAI+E+I+A I L++CITEGIP LDM++VK RL ++ Sbjct: 56 TVRDAVETTGATATVIYVPAPGCKDAILEAIDAGIKLVICITEGIPTLDMLQVKQRLTQA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP+ CKIGIMPG+I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPEECKIGIMPGNIHKKGKIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSSFIDILKLFQDDPQTEAIVMIGEIGGSAEEEAASFIKEYV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S A IG +L LL Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEAAGVKTVRSLAEIGTALKSLL 288 >gi|90411602|ref|ZP_01219612.1| succinyl-CoA synthetase alpha subunit [Photobacterium profundum 3TCK] gi|90327492|gb|EAS43845.1| succinyl-CoA synthetase alpha subunit [Photobacterium profundum 3TCK] Length = 290 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 180/298 (60%), Positives = 226/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T ++++PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVSPGKGGTT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP DAI+E+I+A I LIV ITEGIP LD++ VK RL+++ Sbjct: 56 TVREAVEETGATASVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTLDLLDVKVRLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPGHIHQKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++EAG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEEAGVKTVKSLADIGKALREVTG 289 >gi|258626224|ref|ZP_05721072.1| succinyl-CoA synthetase alpha subunit [Vibrio mimicus VM603] gi|262170926|ref|ZP_06038604.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio mimicus MB-451] gi|258581579|gb|EEW06480.1| succinyl-CoA synthetase alpha subunit [Vibrio mimicus VM603] gi|261892002|gb|EEY37988.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio mimicus MB-451] Length = 290 Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 180/298 (60%), Positives = 224/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTTDMIDVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D ATE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPATEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A++ AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALESAGVKTVKSLADIGKALREVTG 289 >gi|229524090|ref|ZP_04413495.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae bv. albensis VL426] gi|229337671|gb|EEO02688.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae bv. albensis VL426] Length = 290 Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 180/298 (60%), Positives = 224/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVDVTGATATVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTTDMIDVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D ATE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPATEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AE+K A++ AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAALESAGVKTVKSLADIGKALREVTG 289 >gi|319892263|ref|YP_004149138.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Staphylococcus pseudintermedius HKU10-03] gi|317161959|gb|ADV05502.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Staphylococcus pseudintermedius HKU10-03] gi|323464640|gb|ADX76793.1| succinate-CoA ligase alpha subunit [Staphylococcus pseudintermedius ED99] Length = 301 Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 174/295 (58%), Positives = 220/295 (74%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ VDKN+KV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPVF Sbjct: 1 MSVFVDKNSKVIVQGITGSTALFHTKQMLEY-GTQIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK+ T N SVIYVP A DAI+E I+AE+ L +CITE IPV+DM++VK LE Sbjct: 56 TVEEAKKETGGNVSVIYVPAPFAADAILECIDAELDLAICITEHIPVIDMIKVKRYLEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++T D KIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQSTA Sbjct: 116 KTRLIGPNCPGVITSDETKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLE F D+ T+++VM+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLEAFNNDDDTKAVVMIGEIGGTAEEEAAEWI----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI + E G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKTLNECGVKTAATPSEIGSTLIE 286 >gi|242373539|ref|ZP_04819113.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis M23864:W1] gi|242348902|gb|EES40504.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis M23864:W1] Length = 302 Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 168/295 (56%), Positives = 223/295 (75%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T AN SV+YVP A D+I+E+ EA++ +++CITE IPV+DMV+VK L+ Sbjct: 56 TVQEAKNETGANVSVVYVPAPFAADSILEAAEADLDMVICITEHIPVVDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T+++VM+GEIGG+AEEEAAQ++K+ KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKEFNEDPETKAVVMIGEIGGTAEEEAAQWIKEN----MNKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI + + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTADEKIKTLNDCGVETADTPSEIGTTLIE 286 >gi|145635046|ref|ZP_01790752.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae PittAA] gi|145267654|gb|EDK07652.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae PittAA] Length = 289 Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 180/297 (60%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPAPFCKDAIIEAIDAGIKLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEE+AA F+KD KP+V Sbjct: 176 VGIGGDPIPGSSFIDILERFQQDPETEAIVMIGEIGGSAEEDAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L ++L Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAAEKIAALEAAGVTCVKSLAEIGAALRKIL 288 >gi|315658464|ref|ZP_07911336.1| succinyl-CoA synthetase subunit alpha [Staphylococcus lugdunensis M23590] gi|315496793|gb|EFU85116.1| succinyl-CoA synthetase subunit alpha [Staphylococcus lugdunensis M23590] Length = 302 Score = 346 bits (887), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 169/294 (57%), Positives = 222/294 (75%), Gaps = 9/294 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK+ T AN SV+YVP A D+I+E+ +A++ +++CITE IPV+DMV+VK LE Sbjct: 56 TVAEAKQETGANVSVVYVPAPFAADSILEAADADLDMVICITEHIPVVDMVKVKRYLEGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T+++VM+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNNDEETKAVVMIGEIGGTAEEEAAEWI----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GFV G+TAPPG+ MGHAGA+ISGGKG A +KI + G+ A +P+ IG +L+ Sbjct: 232 GFVGGQTAPPGKRMGHAGAIISGGKGTAAEKIKTLNSCGVKTADTPSEIGTTLI 285 >gi|153801968|ref|ZP_01956554.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae MZO-3] gi|124122482|gb|EAY41225.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae MZO-3] Length = 290 Score = 346 bits (887), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 180/298 (60%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTTDMIDVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D ATE+IVM+GEIGG+ EEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPATEAIVMIGEIGGTTEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AE+K A++ AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAALESAGVKTVKSLADIGKALREVTG 289 >gi|149191115|ref|ZP_01869374.1| succinyl-CoA synthetase subunit alpha [Vibrio shilonii AK1] gi|148835043|gb|EDL52021.1| succinyl-CoA synthetase subunit alpha [Vibrio shilonii AK1] Length = 290 Score = 346 bits (887), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 181/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIEY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP DAI+E+I+A I LIV ITEGIP LD++ VK RL+++ Sbjct: 56 TVREAVEETGATASVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTLDLLDVKVRLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPETEAIVMIGEIGGTAEEEAAAFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREITG 289 >gi|315633949|ref|ZP_07889238.1| succinyl-CoA synthetase subunit alpha [Aggregatibacter segnis ATCC 33393] gi|315477199|gb|EFU67942.1| succinyl-CoA synthetase subunit alpha [Aggregatibacter segnis ATCC 33393] Length = 290 Score = 345 bits (886), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 176/297 (59%), Positives = 225/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQALAY-GTKLVGGVSPNKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A A+VIYVP G DAI+E+I+A I LI+CITEGIP LDM+ VK RL ++ Sbjct: 56 TVRDAVEATGATATVIYVPAPGCKDAILEAIDAGIKLIICITEGIPTLDMLVVKQRLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP+ CKIGIMPG+I +KG +GI+SRSGTLTYEAV QT+ EGLGQST Sbjct: 116 GVRMIGPNCPGVITPEECKIGIMPGNIHKKGKIGIVSRSGTLTYEAVKQTTDEGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ F+D+L+LF D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFVDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAFIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEAAGVKTVRSLAEIGSALRAML 288 >gi|328473392|gb|EGF44240.1| succinyl-CoA synthetase subunit alpha [Vibrio parahaemolyticus 10329] Length = 290 Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 180/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQKDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGQGLREVTG 289 >gi|297537991|ref|YP_003673760.1| succinyl-CoA synthetase subunit alpha [Methylotenera sp. 301] gi|297257338|gb|ADI29183.1| succinyl-CoA synthetase, alpha subunit [Methylotenera sp. 301] Length = 293 Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 175/294 (59%), Positives = 222/294 (75%), Gaps = 9/294 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKVL QG TGK GTFH+EQA+ Y T++VGG+ P KG G +PVF Sbjct: 1 MSILVNKNTKVLCQGFTGKQGTFHSEQALAY-GTKMVGGVTPGKGGMSHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A T A ASVIYVPP+ A D+I+E+ +A I LI+CITEGIPVLDM+ VKA L+ + Sbjct: 56 TMRDAVRTTGATASVIYVPPAFAADSILEACDAGIDLIICITEGIPVLDMLNVKAALKAN 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++LIGPNCPG++TPD CKIGIMPGSI +G VGI+SRSGTLTYEAV QT+ LGQST Sbjct: 116 GTKLIGPNCPGVITPDECKIGIMPGSIHMRGKVGIVSRSGTLTYEAVHQTTALNLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KG FI+ L++F AD TE+I+MVGEIGGS EE AA+++K KP+ Sbjct: 176 VGIGGDPIKGLNFIECLQMFEADSETEAIIMVGEIGGSDEEAAAEYIKSHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 ++AG+TAP G+ MGHAGA+ISGG G A DKI A++ AG +A SPA +G +++ Sbjct: 232 AYIAGQTAPAGKRMGHAGAIISGGSGKAVDKIRALELAGAVVASSPAGLGEAVL 285 >gi|254509020|ref|ZP_05121125.1| succinyl-CoA ligase, alpha subunit [Vibrio parahaemolyticus 16] gi|312884953|ref|ZP_07744643.1| succinyl-CoA synthetase subunit alpha [Vibrio caribbenthicus ATCC BAA-2122] gi|219548055|gb|EED25075.1| succinyl-CoA ligase, alpha subunit [Vibrio parahaemolyticus 16] gi|309367430|gb|EFP94992.1| succinyl-CoA synthetase subunit alpha [Vibrio caribbenthicus ATCC BAA-2122] Length = 290 Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 180/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGLITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREITG 289 >gi|260776536|ref|ZP_05885431.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio coralliilyticus ATCC BAA-450] gi|323495097|ref|ZP_08100184.1| succinyl-CoA synthetase subunit alpha [Vibrio brasiliensis LMG 20546] gi|260607759|gb|EEX34024.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio coralliilyticus ATCC BAA-450] gi|323310648|gb|EGA63825.1| succinyl-CoA synthetase subunit alpha [Vibrio brasiliensis LMG 20546] Length = 290 Score = 345 bits (885), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 180/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGLITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREVTG 289 >gi|75294330|sp|Q6ZL94|SUCA_ORYSJ RecName: Full=Probable succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor gi|34393512|dbj|BAC83073.1| putative succinyl-CoA ligase alpha subunit [Oryza sativa Japonica Group] gi|125600835|gb|EAZ40411.1| hypothetical protein OsJ_24862 [Oryza sativa Japonica Group] gi|215769291|dbj|BAH01520.1| unnamed protein product [Oryza sativa Japonica Group] Length = 331 Score = 345 bits (885), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 185/297 (62%), Positives = 229/297 (77%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK+T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF + Sbjct: 36 AVFVDKSTRVICQGITGKNGTFHTEQAIEY-GTTMVGGVTPKKGGTEHLG----LPVFNS 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 VAEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMV+VKA L K S Sbjct: 91 VAEAKAETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVKVKAALNKQS 150 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G VGI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 151 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTC 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE IV++GEIGG+AEE+AA F+++ +KP+V Sbjct: 211 VGIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGTAEEDAAAFIQESKT---QKPVV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DKI A++EAG+ + SPA+IG ++ E+ Sbjct: 268 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIF 324 >gi|54308244|ref|YP_129264.1| succinyl-CoA synthetase subunit alpha [Photobacterium profundum SS9] gi|46912672|emb|CAG19462.1| putative succinyl-CoA synthase, alpha subunit [Photobacterium profundum SS9] Length = 290 Score = 345 bits (885), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 180/298 (60%), Positives = 225/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP DAI+E+I+A I LIV ITEGIP LD++ VK RL+++ Sbjct: 56 TVREAVEETGATASVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTLDLLDVKVRLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMPG+I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPGNIHQKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEDAGVKTVKSLADIGKALREVTG 289 >gi|153835347|ref|ZP_01988014.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Vibrio harveyi HY01] gi|148868138|gb|EDL67297.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Vibrio harveyi HY01] Length = 290 Score = 345 bits (885), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 179/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDSETEAIVMIGEIGGTAEEEAAAYIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLAEIGKGLREVTG 289 >gi|86147658|ref|ZP_01065967.1| succinyl-CoA synthetase alpha subunit [Vibrio sp. MED222] gi|85834569|gb|EAQ52718.1| succinyl-CoA synthetase alpha subunit [Vibrio sp. MED222] Length = 290 Score = 345 bits (885), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 179/298 (60%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH++QAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSDQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP +DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTIDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGLITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA+F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAEFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREITG 289 >gi|148978241|ref|ZP_01814759.1| succinyl-CoA synthetase subunit alpha [Vibrionales bacterium SWAT-3] gi|145962542|gb|EDK27819.1| succinyl-CoA synthetase subunit alpha [Vibrionales bacterium SWAT-3] Length = 290 Score = 345 bits (885), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 180/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGLITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREITG 289 >gi|260901286|ref|ZP_05909681.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio parahaemolyticus AQ4037] gi|308109842|gb|EFO47382.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio parahaemolyticus AQ4037] Length = 290 Score = 345 bits (885), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 180/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGQGLREVTG 289 >gi|57866714|ref|YP_188396.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis RP62A] gi|242242530|ref|ZP_04796975.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis W23144] gi|293366788|ref|ZP_06613464.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis M23864:W2(grey)] gi|81674905|sp|Q5HPU4|SUCD_STAEQ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|57637372|gb|AAW54160.1| succinyl-CoA synthase, alpha subunit [Staphylococcus epidermidis RP62A] gi|242233957|gb|EES36269.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis W23144] gi|291319089|gb|EFE59459.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis M23864:W2(grey)] gi|319401462|gb|EFV89672.1| succinyl-CoA ligase [Staphylococcus epidermidis FRI909] gi|329724340|gb|EGG60852.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus epidermidis VCU144] gi|329736615|gb|EGG72881.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus epidermidis VCU045] Length = 302 Score = 345 bits (885), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 167/295 (56%), Positives = 222/295 (75%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T AN SV+YVP A D+IIE+ +A++ +++CITE IPV+DMV+VK L+ Sbjct: 56 TVEEAKNETGANVSVVYVPAPFAADSIIEAADADLDMVICITEHIPVVDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T+++VM+GEIGG+AEEEAAQ++K+ KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDSETKAVVMIGEIGGTAEEEAAQWIKEN----MNKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI + + G+ A +P+ IG +L++ Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTASEKIKTLNDCGVETADTPSEIGTTLID 286 >gi|289550963|ref|YP_003471867.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Staphylococcus lugdunensis HKU09-01] gi|289180495|gb|ADC87740.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Staphylococcus lugdunensis HKU09-01] Length = 302 Score = 345 bits (885), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 169/294 (57%), Positives = 222/294 (75%), Gaps = 9/294 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK+ T AN SV+YVP A D+I+E+ +A++ +++CITE IPV+DMV+VK LE Sbjct: 56 TVAEAKQETGANVSVVYVPAPFAADSILEAADADLDMVICITEHIPVVDMVKVKRYLEGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T+++VM+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNDDEETKAVVMIGEIGGTAEEEAAEWI----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GFV G+TAPPG+ MGHAGA+ISGGKG A +KI + G+ A +P+ IG +L+ Sbjct: 232 GFVGGQTAPPGKRMGHAGAIISGGKGTAAEKIKTLNSCGVKTADTPSEIGITLI 285 >gi|145627821|ref|ZP_01783622.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae 22.1-21] gi|144979596|gb|EDJ89255.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae 22.1-21] Length = 289 Score = 345 bits (885), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 179/297 (60%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGSSHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPAPFCKDAIIEAIDAGIKLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEE+AA F+KD KP+V Sbjct: 176 VGIGGDPIPGSSFIDILERFQQDPETEAIVMIGEIGGSAEEDAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L ++L Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAAEKIAALEAAGVTCVKSLAEIGAALRKIL 288 >gi|29654689|ref|NP_820381.1| succinate-CoA ligase (ADP-forming), alpha subunit [Coxiella burnetii RSA 493] gi|153207709|ref|ZP_01946356.1| succinate-CoA ligase (ADP-forming), alpha subunit [Coxiella burnetii 'MSU Goat Q177'] gi|154706949|ref|YP_001424007.1| succinyl-CoA synthetase alpha chain [Coxiella burnetii Dugway 5J108-111] gi|212212235|ref|YP_002303171.1| succinyl-CoA synthetase alpha chain [Coxiella burnetii CbuG_Q212] gi|212218993|ref|YP_002305780.1| succinyl-CoA synthetase alpha chain [Coxiella burnetii CbuK_Q154] gi|30581056|sp|P53591|SUCD_COXBU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|29541957|gb|AAO90895.1| succinyl-CoA synthetase alpha chain [Coxiella burnetii RSA 493] gi|120576405|gb|EAX33029.1| succinate-CoA ligase (ADP-forming), alpha subunit [Coxiella burnetii 'MSU Goat Q177'] gi|154356235|gb|ABS77697.1| succinyl-CoA synthetase alpha chain [Coxiella burnetii Dugway 5J108-111] gi|212010645|gb|ACJ18026.1| succinyl-CoA synthetase alpha chain [Coxiella burnetii CbuG_Q212] gi|212013255|gb|ACJ20635.1| succinyl-CoA synthetase alpha chain [Coxiella burnetii CbuK_Q154] Length = 294 Score = 345 bits (885), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 176/299 (58%), Positives = 225/299 (75%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK T+VL QG TGK GTFH+EQAI Y TQ+VGG+ P KG G +P+F Sbjct: 1 MSILIDKETRVLCQGFTGKQGTFHSEQAIEY-GTQMVGGVTPGKGGQSHLG----LPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E T+A+A++I+VP D+IIE+++A + L+VCITEGIPVLDM+ VKA L + Sbjct: 56 SVHEAVEETSADATMIFVPAPFCKDSIIEAVDAGVRLVVCITEGIPVLDMLEVKAYLRQH 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPNCPG++TP CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q G GQST Sbjct: 116 PDVRMIGPNCPGVITPGECKIGIMPGHIHQRGKVGIVSRSGTLTYEAVNQTTQMGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT FIDVLE+F D T++IVMVGEIGG+AEEEAA+F++ KKP+ Sbjct: 176 CVGIGGDPIPGTSFIDVLEMFEKDSQTQAIVMVGEIGGTAEEEAAEFIQSNV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + ++AG TAPPG+ MGHAGA+I+GGKG A DK A++ AG+ + SPA IG+ + E G Sbjct: 232 ISYIAGVTAPPGKRMGHAGAIIAGGKGTAADKYAALEAAGVFVVKSPAEIGKGVAEATG 290 >gi|150388322|ref|YP_001318371.1| succinyl-CoA synthetase subunit alpha [Alkaliphilus metalliredigens QYMF] gi|149948184|gb|ABR46712.1| succinyl-CoA synthetase, alpha subunit [Alkaliphilus metalliredigens QYMF] Length = 300 Score = 345 bits (885), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 223/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+D+NTKV+VQG+TG G FHT+QA+ Y T +V G+ P KG T G +PVF Sbjct: 1 MSVLIDENTKVIVQGITGFTGLFHTKQAMEY-GTNIVAGVTPTKGGTTVEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T N SVIYVPP A DAI+E+ EAE+ L++CITEGIPV+DM++VKA ++ Sbjct: 56 TVKEAVKATGGNTSVIYVPPIFAADAILEATEAELELVICITEGIPVMDMIKVKAFMKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEVCKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSTRGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID+L+ F DE T +++M+GEIGG+AEEEAA++++ KP+V Sbjct: 176 VGIGGDPVNGTSFIDMLKAFNEDEETYAVMMIGEIGGTAEEEAAEWIQSN----MTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+ GKTAPP + MGHAGAVISGGKG A KI ++ GI +A +P +G +L+ +L Sbjct: 232 AFIGGKTAPPSKRMGHAGAVISGGKGKASSKIKTLEACGIKVASTPDVMGETLIAVL 288 >gi|153005044|ref|YP_001379369.1| succinyl-CoA synthetase subunit alpha [Anaeromyxobacter sp. Fw109-5] gi|152028617|gb|ABS26385.1| succinyl-CoA synthetase, alpha subunit [Anaeromyxobacter sp. Fw109-5] Length = 339 Score = 345 bits (884), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 173/298 (58%), Positives = 224/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI V+++T+V+VQG+TG AG+FHTEQ + Y T+VV G+ P +G T + G VP+F Sbjct: 1 MSIYVNRDTRVVVQGITGSAGSFHTEQMLEYG-TRVVAGVTPNRGGTKFQG---TVPIFH 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EK 119 TV +A + T ANA+VI+VPP A DAI ES + IPL+V ITEGIPVLDM+RV+ L E+ Sbjct: 57 TVDDAVKETGANAAVIFVPPPFAADAITESADVGIPLVVAITEGIPVLDMIRVRRFLAER 116 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RLIGPNCPG++TP CKIGIMPG I R G +G++SRSGTLTYEAV Q + GLGQS+ Sbjct: 117 PGTRLIGPNCPGLITPGECKIGIMPGHIHRPGRIGVVSRSGTLTYEAVKQLTDLGLGQSS 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPV GT+F+DVL F D T++I+M+GEIGG+ EE A F++D KKP+ Sbjct: 177 AVGIGGDPVHGTDFVDVLREFADDPGTDAIIMIGEIGGTEEERGAAFVRDHV----KKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPG+ MGHAGAV+SGG G AE KI AM++AGI + P +GR++ + L Sbjct: 233 VGFIAGRTAPPGKRMGHAGAVVSGGSGTAEAKIEAMRDAGITVVDGPHLLGRAMKDAL 290 >gi|28897624|ref|NP_797229.1| succinyl-CoA synthetase subunit alpha [Vibrio parahaemolyticus RIMD 2210633] gi|153838601|ref|ZP_01991268.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Vibrio parahaemolyticus AQ3810] gi|260365989|ref|ZP_05778474.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio parahaemolyticus K5030] gi|260878221|ref|ZP_05890576.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio parahaemolyticus AN-5034] gi|260895658|ref|ZP_05904154.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio parahaemolyticus Peru-466] gi|28805836|dbj|BAC59113.1| succinyl-CoA synthase, alpha subunit [Vibrio parahaemolyticus RIMD 2210633] gi|149748019|gb|EDM58878.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Vibrio parahaemolyticus AQ3810] gi|308088190|gb|EFO37885.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio parahaemolyticus Peru-466] gi|308090179|gb|EFO39874.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio parahaemolyticus AN-5034] gi|308111267|gb|EFO48807.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio parahaemolyticus K5030] Length = 290 Score = 345 bits (884), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 180/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQIHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGQGLREVTG 289 >gi|257425300|ref|ZP_05601725.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus 55/2053] gi|257427960|ref|ZP_05604358.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus 65-1322] gi|257430593|ref|ZP_05606975.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus 68-397] gi|257433354|ref|ZP_05609712.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus E1410] gi|257436196|ref|ZP_05612243.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus M876] gi|282914023|ref|ZP_06321810.1| succinyl-CoA synthase, alpha subunit [Staphylococcus aureus subsp. aureus M899] gi|282924068|ref|ZP_06331744.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus C101] gi|293501054|ref|ZP_06666905.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus 58-424] gi|293510016|ref|ZP_06668724.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus M809] gi|293526603|ref|ZP_06671288.1| succinyl-CoA synthase, alpha subunit [Staphylococcus aureus subsp. aureus M1015] gi|257271757|gb|EEV03895.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus 55/2053] gi|257274801|gb|EEV06288.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus 65-1322] gi|257278721|gb|EEV09340.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus 68-397] gi|257281447|gb|EEV11584.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus E1410] gi|257284478|gb|EEV14598.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus M876] gi|282314040|gb|EFB44432.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus C101] gi|282322091|gb|EFB52415.1| succinyl-CoA synthase, alpha subunit [Staphylococcus aureus subsp. aureus M899] gi|290920675|gb|EFD97738.1| succinyl-CoA synthase, alpha subunit [Staphylococcus aureus subsp. aureus M1015] gi|291096059|gb|EFE26320.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus 58-424] gi|291466960|gb|EFF09478.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus M809] Length = 302 Score = 345 bits (884), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 169/295 (57%), Positives = 221/295 (74%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTKIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A SVIYVP A D+I+ES +A++ +++CITE IPVLDMV+VK L+ Sbjct: 56 TVEEAKNETGATVSVIYVPAPFAADSILESADADLDMVICITEHIPVLDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWI----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIE 286 >gi|197117852|ref|YP_002138279.1| succinyl-CoA synthetase subunit alpha [Geobacter bemidjiensis Bem] gi|197087212|gb|ACH38483.1| succinyl-CoA synthetase, alpha subunit [Geobacter bemidjiensis Bem] Length = 308 Score = 345 bits (884), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 175/298 (58%), Positives = 225/298 (75%), Gaps = 11/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN-VPVF 59 MSILVDKNTKV+ QG+TG G FH + A Y TQ+VGG+ P KG G NV+ PVF Sbjct: 1 MSILVDKNTKVITQGITGATGLFHAQGAREY-GTQMVGGVTPGKG-----GSNVDGFPVF 54 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAEA E+T ANASVIYVPP A D+I+E+I+A + L+ CITEGIPVLDMV+VK ++ Sbjct: 55 NTVAEAVEKTGANASVIYVPPPFAADSIMEAIDAGLDLVCCITEGIPVLDMVKVKQYMQG 114 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RLIGPNCPG++TP CKIGIMPG I R G VG++SRSGTLTYEAV+Q + GLGQST Sbjct: 115 KKTRLIGPNCPGVITPGQCKIGIMPGYIHRPGKVGVVSRSGTLTYEAVWQLTGYGLGQST 174 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPV GT +D L++F D TE+++M+GEIGGSAEEEAA F+K+ KP+ Sbjct: 175 CVGIGGDPVNGTSHLDCLKMFEEDPDTEAVIMIGEIGGSAEEEAAYFVKEH----MTKPV 230 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG+TAPPG+ MGHAGA+ISGGKG A +K+ ++ GI +A +PA + ++L+++ Sbjct: 231 AGYIAGRTAPPGKRMGHAGAIISGGKGTAAEKVAILESCGISVAATPAEMAQALMKVY 288 >gi|27467842|ref|NP_764479.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis ATCC 12228] gi|251810679|ref|ZP_04825152.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis BCM-HMP0060] gi|282876320|ref|ZP_06285187.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis SK135] gi|38605278|sp|Q8CPH4|SUCD_STAES RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|27315387|gb|AAO04521.1|AE016747_18 succinyl-CoA synthetase alpha chain [Staphylococcus epidermidis ATCC 12228] gi|251805839|gb|EES58496.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis BCM-HMP0060] gi|281295345|gb|EFA87872.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis SK135] gi|329736292|gb|EGG72564.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus epidermidis VCU028] Length = 302 Score = 345 bits (884), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 166/295 (56%), Positives = 222/295 (75%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T AN SV+YVP A D+IIE+ +A++ +++CITE IPV+DMV+VK L+ Sbjct: 56 TVEEAKNETGANVSVVYVPAPFAADSIIEAADADLDMVICITEHIPVVDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T+++VM+GEIGG+AEEEAAQ++K+ KP++ Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDSETKAVVMIGEIGGTAEEEAAQWIKEN----MNKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI + + G+ A +P+ IG +L++ Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTASEKIKTLNDCGVETADTPSEIGTTLID 286 >gi|323498618|ref|ZP_08103610.1| succinyl-CoA synthetase subunit alpha [Vibrio sinaloensis DSM 21326] gi|323316316|gb|EGA69335.1| succinyl-CoA synthetase subunit alpha [Vibrio sinaloensis DSM 21326] Length = 290 Score = 345 bits (884), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 179/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQALAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGLITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREITG 289 >gi|314933427|ref|ZP_07840792.1| succinyl-CoA synthase, alpha subunit [Staphylococcus caprae C87] gi|313653577|gb|EFS17334.1| succinyl-CoA synthase, alpha subunit [Staphylococcus caprae C87] Length = 302 Score = 344 bits (883), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 167/295 (56%), Positives = 222/295 (75%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T AN SV+YVP A D+I+E+ EAE+ +++CITE IPV+DMV+V L+ Sbjct: 56 TVEEAKNETGANVSVVYVPAPFAADSILEAAEAELDMVICITEHIPVVDMVKVNRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T+++VM+GEIGG+AEEEAAQ++ K+ KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKEFNEDPETKAVVMIGEIGGTAEEEAAQWI----KQNMNKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI + + G+ A +P+ IG +L++ Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTADEKIKTLNDCGVETADTPSEIGTTLID 286 >gi|167465541|ref|ZP_02330630.1| succinyl-CoA synthetase subunit alpha [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382313|ref|ZP_08056220.1| succinyl-CoA synthetase subunit alpha-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153666|gb|EFX46041.1| succinyl-CoA synthetase subunit alpha-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 311 Score = 344 bits (883), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 174/302 (57%), Positives = 227/302 (75%), Gaps = 10/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNV-N 55 MSIL+ +TKV+ Q +TGK G FHT+ + Y TQ+V G+ P KG T GNV Sbjct: 1 MSILIHNDTKVMTQNMTGKTGMFHTKGGLDY-GTQMVCGVTPGKGGTKVNFTLEDGNVKT 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PV+ TV EAKE T A SVIYVPP+ A D+I+E+++A++ L++CITEGIPVLDM++VK Sbjct: 60 LPVYNTVQEAKEATGATVSVIYVPPAFAADSIMEAVDADLDLVICITEGIPVLDMIKVKR 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +E +RLIGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAV Q + G+ Sbjct: 120 FMEGKKTRLIGPNCPGVITPGECKIGIMPGYIHAPGHVGVVSRSGTLTYEAVHQLTTRGI 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQSTAVGIGGDPVKG+EFID+L LF D T +++M+GEIGG+AEEEAA+++ K Sbjct: 180 GQSTAVGIGGDPVKGSEFIDILTLFNEDPDTYAVIMIGEIGGTAEEEAAEWI----KANM 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+ G+TAPPG+ MGHAGA+ISGGKG A +KI M+ GI +AP+P+ +G +LV Sbjct: 236 KKPVVGFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIATMEACGIRVAPTPSEMGSTLVR 295 Query: 296 LL 297 +L Sbjct: 296 VL 297 >gi|156973655|ref|YP_001444562.1| succinyl-CoA synthetase subunit alpha [Vibrio harveyi ATCC BAA-1116] gi|163802533|ref|ZP_02196425.1| succinyl-CoA synthetase subunit alpha [Vibrio sp. AND4] gi|269960712|ref|ZP_06175084.1| succinyl-CoA synthetase alpha subunit [Vibrio harveyi 1DA3] gi|156525249|gb|ABU70335.1| hypothetical protein VIBHAR_01358 [Vibrio harveyi ATCC BAA-1116] gi|159173616|gb|EDP58435.1| succinyl-CoA synthetase subunit alpha [Vibrio sp. AND4] gi|269834789|gb|EEZ88876.1| succinyl-CoA synthetase alpha subunit [Vibrio harveyi 1DA3] Length = 290 Score = 344 bits (883), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 179/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAYIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLAEIGKGLREVTG 289 >gi|298705781|emb|CBJ28950.1| Succinate--CoA ligase (GDP-forming), alpha subunit [Ectocarpus siliculosus] Length = 322 Score = 344 bits (883), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 176/296 (59%), Positives = 221/296 (74%), Gaps = 8/296 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +D+NTKV+VQG TGK GTFH EQAI Y +Q VGG+ PKKG ++ PVF TV Sbjct: 27 VWIDQNTKVIVQGFTGKQGTFHAEQAIEY-GSQYVGGVTPKKGGQT----HLGKPVFNTV 81 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 AEAKE +ASV+YVPP AG A++++IE EIPL+VCITEGIP DM +VK L ++++ Sbjct: 82 AEAKEGVKPDASVVYVPPPFAGAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALRQQTA 141 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV+QT+ G+GQST V Sbjct: 142 TRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCV 201 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE F D TE IVM+GEIGG AEE+AA++L + KP+V Sbjct: 202 GIGGDPFNGTNFIDCLERFTKDPETEGIVMIGEIGGQAEEDAAEWLMEHGDPA--KPVVS 259 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKG A K A+++AG+ I+ SPA++G ++V Sbjct: 260 FIAGSTAPPGRRMGHAGAIISGGKGTAAAKFAALEDAGVYISRSPAQLGSTMVRAF 315 >gi|220933989|ref|YP_002512888.1| succinyl-CoA synthetase, alpha subunit [Thioalkalivibrio sp. HL-EbGR7] gi|219995299|gb|ACL71901.1| succinyl-CoA synthetase, alpha subunit [Thioalkalivibrio sp. HL-EbGR7] Length = 288 Score = 344 bits (883), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 176/297 (59%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+V+ QG TGK GTFH+EQAI Y T++VGG+ P KG ++++PVF Sbjct: 1 MSILIDKDTRVICQGFTGKQGTFHSEQAIAY-GTRMVGGVTPGKGGQK----HLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A A++IYVP A DAI+E+++A I +IVCITEGIPVLDM+RVKA L S Sbjct: 56 TVHDAVRDTGAEATMIYVPAPFAADAILEAMDAGIQVIVCITEGIPVLDMLRVKAALAHS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 DARLIGPNCPGVITPGGCKIGIMPGHIHQPGRVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP++G F+D L LF AD TE I++VGEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIQGMNFVDCLALFQADPQTEGIILVGEIGGTAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAPPGR MGHAGA+ISGG+G AE K A++ AG+ + SPA +G + LL Sbjct: 232 AYIAGVTAPPGRRMGHAGAIISGGQGTAEQKFAALEAAGVSVVRSPAEMGERMKTLL 288 >gi|641971|gb|AAA61788.1| succinyl-CoA synthetase alpha chain [Coxiella burnetii] Length = 294 Score = 344 bits (883), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 176/299 (58%), Positives = 225/299 (75%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK T+VL QG TGK GTFH+EQAI Y TQ+VGG+ P KG G +P+F Sbjct: 1 MSILIDKETRVLCQGFTGKQGTFHSEQAIEY-GTQMVGGVTPGKGGQSHLG----LPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E T+A+A++I+VP D+IIE+++A + L+VCITEGIPVLDM+ VKA L + Sbjct: 56 SVHEAVEETSADATMIFVPAPFCKDSIIEAVDAGVRLVVCITEGIPVLDMLEVKAYLRQH 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPNCPG++TP CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q G GQST Sbjct: 116 PDVRMIGPNCPGVITPGECKIGIMPGHIHQRGKVGIVSRSGTLTYEAVNQTTQMGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT FIDVLE+F D T++IVMVGEIGG+AEEEAA+F++ KKP+ Sbjct: 176 CVGIGGDPIPGTSFIDVLEMFEKDSQTQAIVMVGEIGGTAEEEAAEFIQSNV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + ++AG TAPPG+ MGHAGA+I+GGKG A DK A++ AG+ + SPA IG+ + E G Sbjct: 232 ISYIAGVTAPPGKRMGHAGAIIAGGKGTAADKYAALEAAGVFVVKSPAEIGKGVREATG 290 >gi|91228431|ref|ZP_01262356.1| succinyl-CoA synthetase alpha subunit [Vibrio alginolyticus 12G01] gi|254229704|ref|ZP_04923113.1| succinyl-CoA synthetase alpha chain [Vibrio sp. Ex25] gi|262394880|ref|YP_003286734.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Vibrio sp. Ex25] gi|269967958|ref|ZP_06181998.1| succinyl-CoA synthetase alpha subunit [Vibrio alginolyticus 40B] gi|91188015|gb|EAS74322.1| succinyl-CoA synthetase alpha subunit [Vibrio alginolyticus 12G01] gi|151937749|gb|EDN56598.1| succinyl-CoA synthetase alpha chain [Vibrio sp. Ex25] gi|262338474|gb|ACY52269.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio sp. Ex25] gi|269827481|gb|EEZ81775.1| succinyl-CoA synthetase alpha subunit [Vibrio alginolyticus 40B] Length = 290 Score = 344 bits (882), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 179/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAYIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLAEIGQGLREVTG 289 >gi|260772362|ref|ZP_05881278.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio metschnikovii CIP 69.14] gi|260611501|gb|EEX36704.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio metschnikovii CIP 69.14] Length = 290 Score = 344 bits (882), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 178/298 (59%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQALAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP +DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTIDMIDVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQDDPETEAIVMIGEIGGTAEEEAAAFIKQHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AE+K A++ AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAALESAGVKTVKSLADIGQALREVTG 289 >gi|251797455|ref|YP_003012186.1| succinyl-CoA synthetase, subunit alpha [Paenibacillus sp. JDR-2] gi|247545081|gb|ACT02100.1| succinyl-CoA synthetase, alpha subunit [Paenibacillus sp. JDR-2] Length = 313 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 175/302 (57%), Positives = 227/302 (75%), Gaps = 10/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGST-----YWTGGNVN 55 MSILV+K+TKV+ QG+TG G FH + A+ Y TQ+VGG+ P KG T G V+ Sbjct: 1 MSILVNKDTKVITQGITGATGLFHAKGALDY-GTQMVGGVTPGKGGTNVDITLENGNVVS 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV +A T A ASVIYVPP+ A D+I+E+++A + L++CITEGIPVLDMV+VK Sbjct: 60 LPVFNTVEQAVAATGATASVIYVPPAFAADSIMEAVDAGLDLVICITEGIPVLDMVKVKR 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +E S + LIGPNCPG++TP CKIGIMPG I KG VG++SRSGTLTYEAV Q S G+ Sbjct: 120 YMEGSKTTLIGPNCPGVITPGECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLSTRGI 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQS+AVGIGGDPVKG+EFID+L F D T +++M+GEIGG+AEEEAA+++K Sbjct: 180 GQSSAVGIGGDPVKGSEFIDILSRFNEDPDTYAVIMIGEIGGTAEEEAAEWIKAN----M 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+ G TAPPG+ MGHAGA+ISGGKG A +KI ++ GI +AP+P+ +G +LV Sbjct: 236 KKPVVGFIGGATAPPGKRMGHAGAIISGGKGTAAEKIATLEACGIKVAPTPSDMGSTLVS 295 Query: 296 LL 297 +L Sbjct: 296 VL 297 >gi|225457502|ref|XP_002268479.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 340 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 183/294 (62%), Positives = 228/294 (77%), Gaps = 9/294 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF TV Sbjct: 45 VFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNTV 99 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 AEAK T AN SVIYVPP A AI+E++EAE+ L+VCITEGIP DMV+VKA L + + Sbjct: 100 AEAKAETKANTSVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVKVKAALNRQTK 159 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G VGI+SRSGTLTYEAVFQT+ GLGQST+V Sbjct: 160 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTSV 219 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D ++ FL D TE IV++GEIGG+AEE+AAQ +K+ +KPIV Sbjct: 220 GIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEIGGTAEEDAAQLIKESKT---EKPIVA 276 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA++SGGKG A+DKI ++EAG+ + SPA++G +++E Sbjct: 277 FIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKMGVAMLE 330 >gi|510882|emb|CAA54877.1| putative succinyl-CoA synthetase alpha subunit [Coxiella burnetii] Length = 294 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 174/295 (58%), Positives = 224/295 (75%), Gaps = 10/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK T+VL QG TGK GTFH+EQAI Y TQ+VGG+ P KG G +P+F Sbjct: 1 MSILIDKETRVLCQGFTGKQGTFHSEQAIEY-GTQMVGGVTPGKGGQSHLG----LPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E T+A+A++I+VP D+IIE+++A + L+VCITEGIPVLDM+ VKA L + Sbjct: 56 SVHEAVEETSADATMIFVPAPFCKDSIIEAVDAGVRLVVCITEGIPVLDMLEVKAYLRQH 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPNCPG++TP CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q G GQST Sbjct: 116 PDVRMIGPNCPGVITPGECKIGIMPGHIHQRGKVGIVSRSGTLTYEAVNQTTQMGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT FIDVLE+F D T++IVMVGEIGG+AEEEAA+F++ KKP+ Sbjct: 176 CVGIGGDPIPGTSFIDVLEMFEKDSQTQAIVMVGEIGGTAEEEAAEFIQSNV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 + ++AG TAPPG+ MGHAGA+I+GGKG A DK A++ AG+ + SPA I ++L+ Sbjct: 232 ISYIAGVTAPPGKRMGHAGAIIAGGKGTAADKYAALEAAGVFVVKSPAEIAKALL 286 >gi|84393475|ref|ZP_00992231.1| succinyl-CoA synthetase alpha subunit [Vibrio splendidus 12B01] gi|218710208|ref|YP_002417829.1| succinyl-CoA synthetase subunit alpha [Vibrio splendidus LGP32] gi|84375903|gb|EAP92794.1| succinyl-CoA synthetase alpha subunit [Vibrio splendidus 12B01] gi|218323227|emb|CAV19404.1| Succinyl-CoA synthetase alpha chain [Vibrio splendidus LGP32] Length = 290 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 179/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH++QAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSDQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGLITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA+F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAEFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREITG 289 >gi|167855518|ref|ZP_02478281.1| SucD [Haemophilus parasuis 29755] gi|167853384|gb|EDS24635.1| SucD [Haemophilus parasuis 29755] Length = 290 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 177/297 (59%), Positives = 223/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH++QA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSQQALDY-GTQLVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP G DAI+E+I+A I L+VCITEGIP LDM++VK RL ++ Sbjct: 56 TVREAVEATGATATVIYVPAPGCKDAILEAIDAGIQLVVCITEGIPTLDMLQVKQRLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP+ CKIGIMPGSI +KG +GI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPNECKIGIMPGSIHKKGKIGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L LF AD TE+I+M+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILTLFQADPETEAIIMIGEIGGSAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEAAGVKTVRSLADIGVALQAVL 288 >gi|296087991|emb|CBI35274.3| unnamed protein product [Vitis vinifera] Length = 336 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 183/296 (61%), Positives = 228/296 (77%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF TV Sbjct: 41 VFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNTV 95 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 AEAK T AN SVIYVPP A AI+E++EAE+ L+VCITEGIP DMV+VKA L + + Sbjct: 96 AEAKAETKANTSVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVKVKAALNRQTK 155 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G VGI+SRSGTLTYEAVFQT+ GLGQST+V Sbjct: 156 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTSV 215 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D ++ FL D TE IV++GEIGG+AEE+AAQ +K+ +KPIV Sbjct: 216 GIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEIGGTAEEDAAQLIKESKT---EKPIVA 272 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DKI ++EAG+ + SPA++G +++E Sbjct: 273 FIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKMGVAMLEAF 328 >gi|15924236|ref|NP_371770.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus Mu50] gi|15926829|ref|NP_374362.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus N315] gi|57651815|ref|YP_186121.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus COL] gi|82750849|ref|YP_416590.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus RF122] gi|87161332|ref|YP_493836.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194954|ref|YP_499754.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148267737|ref|YP_001246680.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus JH9] gi|150393795|ref|YP_001316470.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus JH1] gi|151221368|ref|YP_001332190.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus str. Newman] gi|156979567|ref|YP_001441826.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus Mu3] gi|161509412|ref|YP_001575071.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253315604|ref|ZP_04838817.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006033|ref|ZP_05144634.2| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795698|ref|ZP_05644677.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9781] gi|258415922|ref|ZP_05682192.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9763] gi|258421684|ref|ZP_05684608.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9719] gi|258423913|ref|ZP_05686798.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9635] gi|258444584|ref|ZP_05692913.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A8115] gi|258447583|ref|ZP_05695727.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A6300] gi|258449425|ref|ZP_05697528.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A6224] gi|258452545|ref|ZP_05700551.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A5948] gi|258454804|ref|ZP_05702768.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A5937] gi|262048144|ref|ZP_06021031.1| succinyl-CoA synthetase alpha subunit [Staphylococcus aureus D30] gi|262051309|ref|ZP_06023532.1| succinyl-CoA synthetase alpha subunit [Staphylococcus aureus 930918-3] gi|269202862|ref|YP_003282131.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus ED98] gi|282892734|ref|ZP_06300969.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus A8117] gi|282920030|ref|ZP_06327759.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus A9765] gi|282927588|ref|ZP_06335204.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus A10102] gi|284024239|ref|ZP_06378637.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus 132] gi|294848241|ref|ZP_06788988.1| succinyl-CoA ligase subunit alpha [Staphylococcus aureus A9754] gi|295406181|ref|ZP_06815988.1| succinyl-CoA ligase subunit alpha [Staphylococcus aureus A8819] gi|296274803|ref|ZP_06857310.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus MR1] gi|297244409|ref|ZP_06928292.1| succinyl-CoA ligase subunit alpha [Staphylococcus aureus A8796] gi|54039646|sp|P99070|SUCD_STAAN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|54042230|sp|P66866|SUCD_STAAM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|81694646|sp|Q5HGI6|SUCD_STAAC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|13701046|dbj|BAB42341.1| succinyl-CoA synthetase [Staphylococcus aureus subsp. aureus N315] gi|14247016|dbj|BAB57408.1| succinyl-CoA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|57286001|gb|AAW38095.1| succinyl-CoA synthase, alpha subunit [Staphylococcus aureus subsp. aureus COL] gi|82656380|emb|CAI80799.1| succinyl-CoA synthetase alpha chain [Staphylococcus aureus RF122] gi|87127306|gb|ABD21820.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202512|gb|ABD30322.1| succinyl-CoA synthetase, alpha subunit, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740806|gb|ABQ49104.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus JH9] gi|149946247|gb|ABR52183.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus aureus subsp. aureus JH1] gi|150374168|dbj|BAF67428.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus aureus subsp. aureus str. Newman] gi|156721702|dbj|BAF78119.1| succinyl-CoA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|160368221|gb|ABX29192.1| succinate--CoA ligase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257789670|gb|EEV28010.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9781] gi|257839258|gb|EEV63732.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9763] gi|257842370|gb|EEV66795.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9719] gi|257845942|gb|EEV69971.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9635] gi|257850077|gb|EEV74030.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A8115] gi|257853774|gb|EEV76733.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A6300] gi|257857413|gb|EEV80311.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A6224] gi|257859763|gb|EEV82605.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A5948] gi|257863187|gb|EEV85951.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A5937] gi|259160684|gb|EEW45705.1| succinyl-CoA synthetase alpha subunit [Staphylococcus aureus 930918-3] gi|259163710|gb|EEW48265.1| succinyl-CoA synthetase alpha subunit [Staphylococcus aureus D30] gi|262075152|gb|ACY11125.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus ED98] gi|282590591|gb|EFB95668.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus A10102] gi|282594746|gb|EFB99730.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus A9765] gi|282764731|gb|EFC04856.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus A8117] gi|285816928|gb|ADC37415.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Staphylococcus aureus 04-02981] gi|294825041|gb|EFG41463.1| succinyl-CoA ligase subunit alpha [Staphylococcus aureus A9754] gi|294968769|gb|EFG44791.1| succinyl-CoA ligase subunit alpha [Staphylococcus aureus A8819] gi|297178439|gb|EFH37685.1| succinyl-CoA ligase subunit alpha [Staphylococcus aureus A8796] gi|298694539|gb|ADI97761.1| succinyl-CoA synthetase alpha chain [Staphylococcus aureus subsp. aureus ED133] gi|312829640|emb|CBX34482.1| succinyl-CoA ligase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315131040|gb|EFT87024.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus CGS03] gi|315198486|gb|EFU28815.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus CGS01] gi|320140938|gb|EFW32785.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus MRSA131] gi|320144347|gb|EFW36113.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus MRSA177] gi|323441024|gb|EGA98731.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus O11] gi|323443892|gb|EGB01503.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus O46] gi|329727104|gb|EGG63560.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus aureus subsp. aureus 21172] gi|329727821|gb|EGG64272.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus aureus subsp. aureus 21189] gi|329733612|gb|EGG69940.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus aureus subsp. aureus 21193] Length = 302 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 168/295 (56%), Positives = 221/295 (74%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTKIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A SVIYVP A D+I+E+ +A++ +++CITE IPVLDMV+VK L+ Sbjct: 56 TVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWI----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIE 286 >gi|49483409|ref|YP_040633.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus MRSA252] gi|282903801|ref|ZP_06311689.1| succinyl-CoA synthase, alpha subunit [Staphylococcus aureus subsp. aureus C160] gi|282905564|ref|ZP_06313419.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus Btn1260] gi|282908539|ref|ZP_06316369.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910818|ref|ZP_06318621.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus WBG10049] gi|282918945|ref|ZP_06326680.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus C427] gi|283957989|ref|ZP_06375440.1| succinyl-CoA synthase, alpha subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|295427733|ref|ZP_06820365.1| succinyl-CoA ligase subunit alpha [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591309|ref|ZP_06949947.1| succinate--CoA ligase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus MN8] gi|81651268|sp|Q6GHI9|SUCD_STAAR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|49241538|emb|CAG40224.1| putative succinyl-CoA ligase [Staphylococcus aureus subsp. aureus MRSA252] gi|282316755|gb|EFB47129.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus C427] gi|282325423|gb|EFB55732.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus WBG10049] gi|282327601|gb|EFB57884.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330856|gb|EFB60370.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus Btn1260] gi|282595419|gb|EFC00383.1| succinyl-CoA synthase, alpha subunit [Staphylococcus aureus subsp. aureus C160] gi|283790138|gb|EFC28955.1| succinyl-CoA synthase, alpha subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|295128091|gb|EFG57725.1| succinyl-CoA ligase subunit alpha [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576195|gb|EFH94911.1| succinate--CoA ligase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus MN8] gi|312438376|gb|ADQ77447.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus TCH60] gi|315194135|gb|EFU24528.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus CGS00] Length = 302 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 168/295 (56%), Positives = 221/295 (74%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTKIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A SVIYVP A D+I+E+ +A++ +++CITE IPVLDMV+VK L+ Sbjct: 56 TVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWI----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIE 286 >gi|21282858|ref|NP_645946.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus MW2] gi|49486085|ref|YP_043306.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus MSSA476] gi|253731865|ref|ZP_04866030.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733516|ref|ZP_04867681.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus TCH130] gi|282916496|ref|ZP_06324258.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus D139] gi|297208108|ref|ZP_06924539.1| succinate--CoA ligase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300912189|ref|ZP_07129632.1| succinate--CoA ligase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus TCH70] gi|38605353|sp|Q8NX01|SUCD_STAAW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|81649421|sp|Q6G9W7|SUCD_STAAS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|21204297|dbj|BAB94994.1| succinyl-CoA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|49244528|emb|CAG42957.1| putative succinyl-CoA ligase [Staphylococcus aureus subsp. aureus MSSA476] gi|253724275|gb|EES93004.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728570|gb|EES97299.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus TCH130] gi|282319936|gb|EFB50284.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus D139] gi|296887351|gb|EFH26253.1| succinate--CoA ligase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886435|gb|EFK81637.1| succinate--CoA ligase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus TCH70] Length = 302 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 168/295 (56%), Positives = 221/295 (74%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTKIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A SVIYVP A D+I+E+ +A++ +++CITE IPVLDMV+VK L+ Sbjct: 56 TVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWI----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIE 286 >gi|330685666|gb|EGG97307.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus epidermidis VCU121] Length = 301 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 168/295 (56%), Positives = 221/295 (74%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK+ T AN SV+YVP A D+I+E+ +AE+ +++CITE IPV+DMV+VK L+ Sbjct: 56 TVEEAKQETGANVSVVYVPAPFAADSILEAADAELDMVICITEHIPVVDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T+++VM+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPETKAVVMIGEIGGTAEEEAAEWI----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTASEKIKTLNSCGVETADTPSEIGTTLIE 286 >gi|332374076|gb|AEE62179.1| unknown [Dendroctonus ponderosae] Length = 322 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 220/297 (74%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + K+TKV+ QG TGK GTFH++Q+I Y T VGG+ P KG G +PVF + Sbjct: 29 NLKIGKHTKVICQGFTGKQGTFHSKQSIEYG-TNFVGGVSPGKGGKTHLG----LPVFDS 83 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAK T ANA++I+VPP GA AI E+++AEI LIV ITEGIP DMV+VK RL + Sbjct: 84 VKEAKTATQANATIIFVPPPGAAKAIHEALDAEIELIVVITEGIPQHDMVKVKHRLVRQD 143 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR++GPNCPGI+ P++CK+GIMPG I +KG VGI+SRSGTLTYEAV QT+Q GLGQ+ Sbjct: 144 KSRMVGPNCPGIIYPEACKMGIMPGFIHQKGKVGIVSRSGTLTYEAVHQTTQSGLGQTLC 203 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID LE+FL D TE IV++GEIGG EE AA++L K + KP+V Sbjct: 204 VGIGGDPFNGTNFIDCLEVFLNDTDTEGIVLIGEIGGMDEENAAEYLAQHNKGSKSKPVV 263 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKG AEDK+ A++ G+ + SPA+IG +L+E + Sbjct: 264 AFIAGMTAPPGRRMGHAGAIISGGKGKAEDKVKALEAVGVKVTRSPAKIGETLLEAM 320 >gi|73662829|ref|YP_301610.1| succinyl-CoA synthetase subunit alpha [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495344|dbj|BAE18665.1| succinyl-CoA synthetase alpha subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 301 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 171/295 (57%), Positives = 220/295 (74%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVIVQGITGSTALFHTKQMLEY-GTQIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA++ T A SVIYVP A DAI+E IEAE+ L +CITE IPV+DMV+VK E Sbjct: 56 TVEEAQKETGATVSVIYVPAPFAADAILECIEAELDLAICITEHIPVIDMVKVKRYSEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R++GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRIVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWI----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GFV G+TAPPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L++ Sbjct: 232 GFVGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTADTPSEIGTTLID 286 >gi|85711260|ref|ZP_01042319.1| Succinyl-CoA synthetase, alpha subunit [Idiomarina baltica OS145] gi|85694761|gb|EAQ32700.1| Succinyl-CoA synthetase, alpha subunit [Idiomarina baltica OS145] Length = 290 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 179/298 (60%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+IIE+ +A I LIVCITEGIP LDM+ VK L Sbjct: 56 TVKEAVEATGATASVIYVPAPFCKDSIIEAADAGIELIVCITEGIPTLDMLYVKEYLTHK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LELF D TE+IVM+GEIGG+AEEEAA+++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILELFEKDPETEAIVMIGEIGGTAEEEAAEYIKNHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+I+GGKG A++K A++ AG+ S A IG+++ E G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGKAVREKTG 289 >gi|261252267|ref|ZP_05944840.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio orientalis CIP 102891] gi|260935658|gb|EEX91647.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio orientalis CIP 102891] Length = 290 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 179/298 (60%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----QPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAYIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREVTG 289 >gi|88606882|ref|YP_505610.1| succinyl-CoA synthetase, alpha subunit [Anaplasma phagocytophilum HZ] gi|88597945|gb|ABD43415.1| succinyl-CoA synthetase, alpha subunit [Anaplasma phagocytophilum HZ] Length = 295 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 188/299 (62%), Positives = 230/299 (76%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKV+ QG TG GTFH+EQAI Y T +VGG+ P KG T G +PVF Sbjct: 1 MSVLVDKNTKVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGTEHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+AKE T ANASVIYVP + A DAI+E++EAEI LIVCITEGIPVLDMVRVK L S Sbjct: 56 TVAQAKEATGANASVIYVPAAFAADAILEALEAEIELIVCITEGIPVLDMVRVKRALRGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP+ CKIGIMPG I KG+VG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 RSRLIGPNCPGIITPEECKIGIMPGYIHGKGNVGVVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F + +ELF+ D+ T IVM+GEIGGS EEEA ++++ K KKP++ Sbjct: 176 IGIGGDPVHGLTFAECVELFMNDDDTHCIVMIGEIGGSEEEEAVEYMQSLEK---KKPMI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GFVAG+TAP GR MGHAGA+ SG G A+ KI M+ AG+ +A +PA IG++++E++ S Sbjct: 233 GFVAGQTAPAGRRMGHAGAITSGNSGTAKGKIEFMERAGVVVAATPAVIGKTVLEVMQS 291 >gi|307130100|ref|YP_003882116.1| succinyl-CoA synthetase, NAD(P)-binding, subunit alpha [Dickeya dadantii 3937] gi|306527629|gb|ADM97559.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Dickeya dadantii 3937] Length = 290 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 179/298 (60%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG G+FH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGSFHSEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +LE+S Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLTVKVKLEQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP +CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGACKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +LG Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKAVLG 289 >gi|219363381|ref|NP_001136494.1| hypothetical protein LOC100216609 [Zea mays] gi|194695918|gb|ACF82043.1| unknown [Zea mays] Length = 331 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 182/297 (61%), Positives = 229/297 (77%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK+T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF + Sbjct: 36 AVFVDKSTRVICQGITGKNGTFHTEQAIEY-GTNMVGGVTPKKGGTEHLG----LPVFNS 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 VAEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMV+VKA L + S Sbjct: 91 VAEAKAETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVKVKAALNRQS 150 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 151 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTC 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE IV++GEIGG+AEE+AA F+++ +KP+V Sbjct: 211 VGIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGTAEEDAATFIQESKT---QKPVV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+++GGKG A+DKI A++EAG+ + SPA+IG ++ E+ Sbjct: 268 AFIAGLTAPPGRRMGHAGAIVAGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIF 324 >gi|27363637|ref|NP_759165.1| succinyl-CoA synthetase subunit alpha [Vibrio vulnificus CMCP6] gi|27359753|gb|AAO08692.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio vulnificus CMCP6] Length = 290 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 177/298 (59%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQALAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A++ AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALESAGVKTVKSLAEIGQALREVTG 289 >gi|17550194|ref|NP_510450.1| hypothetical protein C05G5.4 [Caenorhabditis elegans] gi|1711573|sp|P53596|SUCA_CAEEL RecName: Full=Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor gi|3874024|emb|CAA94107.1| C. elegans protein C05G5.4, confirmed by transcript evidence [Caenorhabditis elegans] Length = 322 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 175/293 (59%), Positives = 227/293 (77%), Gaps = 6/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+VQG TGK GTFH +Q + Y T+VVGG++ K T G +PVF Sbjct: 27 NLKINKDTKVIVQGFTGKQGTFHGKQMLEY-NTKVVGGVNANKAGTEHLG----LPVFKN 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V+EA+ +T A+ASVIYVP S AG AI E+++AEIPL+VCITEGIP DMVRVK+RL +++ Sbjct: 82 VSEARNKTGADASVIYVPASAAGSAIEEAMDAEIPLVVCITEGIPQHDMVRVKSRLLKQN 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI++ D CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q G GQ+ Sbjct: 142 KTRLVGPNCPGIISADQCKIGIMPGHIHKRGCIGIVSRSGTLTYEAVHQTTQVGFGQTLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL D T+ I+++GEIGGSAEEEAA +LK+ +KP+V Sbjct: 202 VGIGGDPFNGTNFIDCLNVFLEDPETKGIILIGEIGGSAEEEAAAYLKEHNSGANRKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG TAPPGR MGHAGA+ISGGKG A DKINA++EAG+ + SPA++G S+ Sbjct: 262 SFIAGVTAPPGRRMGHAGAIISGGKGTAADKINALREAGVVVTDSPAKLGTSM 314 >gi|258545092|ref|ZP_05705326.1| succinyl-CoA synthetase subunit alpha [Cardiobacterium hominis ATCC 15826] gi|258519669|gb|EEV88528.1| succinyl-CoA synthetase subunit alpha [Cardiobacterium hominis ATCC 15826] Length = 290 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 175/299 (58%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++KNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG +++ PVF Sbjct: 1 MSIYINKNTKVICQGFTGSQGTFHSEQAIAY-GTQLVGGVTPGKGGQ----SHLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 EA T ANAS+I+VPP+ A D+I+E+++A I +I CITEGIPVLDM++VK L + Sbjct: 56 NCHEAVAATGANASMIFVPPAFAADSILEAVDAGIEVIACITEGIPVLDMLKVKTALSGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + RLIGPNCPG++TP CK+GIMPG I + G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 NVRLIGPNCPGVITPGECKMGIMPGHIHQPGVVGIVSRSGTLTYEAVHQTTGIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F+DVL F AD T+ IVMVGEIGGSAEEEAA+++K KP+V Sbjct: 176 VGIGGDPINGTSFVDVLAAFQADPQTKGIVMVGEIGGSAEEEAAEYIKAHV----NKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAPPG+ MGHAGA+I+GGKG A DK A++ AG+ SPA IG +L +L+G+ Sbjct: 232 AYIAGVTAPPGKRMGHAGAIIAGGKGTAADKFRALEAAGVATVRSPADIGATLKQLMGA 290 >gi|219870878|ref|YP_002475253.1| succinyl-CoA synthetase alpha chain [Haemophilus parasuis SH0165] gi|219691082|gb|ACL32305.1| succinyl-CoA synthetase alpha chain [Haemophilus parasuis SH0165] Length = 290 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 177/297 (59%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH++QA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSQQALDY-GTQLVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP G DAI+E+I+A I L+VCITEGIP LDM++VK RL ++ Sbjct: 56 TVREAVEATGATATVIYVPAPGCKDAILEAIDAGIQLVVCITEGIPTLDMLQVKQRLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGCIHKKGKIGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L LF AD TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILTLFQADPETEAIVMIGEIGGSAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S IG +L +L Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEAAGVKTVRSLGDIGAALQAVL 288 >gi|292572046|gb|ADE29961.1| Succinyl-CoA synthetase alpha chain [Rickettsia prowazekii Rp22] Length = 292 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 179/300 (59%), Positives = 232/300 (77%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K TKV+ QG TG GTFH+EQAI Y T +VGG+ P KG ++N+PV+ Sbjct: 1 MAILINKKTKVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGHT----HLNLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+A+I ++VCITEGIPVLDM++VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAKIEVVVCITEGIPVLDMIKVKRALIGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKIGDIGIVSRSGTLTYEAVAQTTAAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +E+FL D+ T++I+++GEIGGSAEE+AA F+K + KKPIV Sbjct: 176 VGIGGDPVNGTSFVDCIEMFLQDDETKAIIIIGEIGGSAEEDAADFIK---QSKIKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAP + MGHAGA+ISGGKG AEDK+ ++ AG+ I SPA IG+++++LL + Sbjct: 233 SFIAGITAPADKRMGHAGAIISGGKGSAEDKVEVLQSAGVIITRSPADIGKTMLDLLNKI 292 >gi|282891424|ref|ZP_06299923.1| hypothetical protein pah_c161o041 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498709|gb|EFB41029.1| hypothetical protein pah_c161o041 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 292 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 174/300 (58%), Positives = 227/300 (75%), Gaps = 10/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV++ TKV+ QG+TGKAG FHTEQ + Y + VGG+ P KG G +PVF Sbjct: 1 MSILVNRKTKVITQGITGKAGNFHTEQCLQY-GSHFVGGVTPGKGGQETLG----LPVFE 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK+ T +AS+I+VPP A DAI+E+ +A IPLI+CITEGIP+ DM+ V + + S Sbjct: 56 TVYEAKKATQCDASMIFVPPPFAADAILEAEDAGIPLIICITEGIPIRDMLEVSSVMRTS 115 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +SRLIGPNCPGI+TP+ CKIGIMPG I RKG++GI+SRSGTLTYEAV+QT+Q GLGQS+ Sbjct: 116 KTSRLIGPNCPGIITPEECKIGIMPGYIHRKGNIGIVSRSGTLTYEAVWQTTQLGLGQSS 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT FID+LELF D T +I+++GEIGG AEE+AA+++K+ KP+ Sbjct: 176 CVGIGGDPLNGTNFIDILELFEKDSETNAILLIGEIGGEAEEQAAEWIKEHC----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG APPGR MGHAGA++SGGKG A+ KI A+K+AG+ + SPA +G ++ + L S Sbjct: 232 AAFIAGTMAPPGRRMGHAGAIVSGGKGTAQGKIEALKKAGVHVTTSPAEMGSTIHKALRS 291 >gi|229918616|ref|YP_002887262.1| succinyl-CoA synthetase subunit alpha [Exiguobacterium sp. AT1b] gi|229470045|gb|ACQ71817.1| succinyl-CoA synthetase, alpha subunit [Exiguobacterium sp. AT1b] Length = 305 Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 174/297 (58%), Positives = 223/297 (75%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI DK+TKV++QG+TGK G FH EQ + Y T++VGG+ P KG T NVPVF Sbjct: 1 MSIWADKDTKVIIQGITGKQGLFHGEQMLAY-NTKLVGGVTPGKGGTTVLD---NVPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA E T ANAS+IYVPP+ A D+I+E+ ++ I LI+CITEGIPV+DM++VK LE Sbjct: 57 TVSEAVEATGANASIIYVPPAFAADSIMEAADSGIELIICITEGIPVVDMIQVKRYLEDK 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TP K+GIMPG I KG VGI+SRSGTLTYEAV Q + G+GQSTA Sbjct: 117 PARLIGPNCPGIITPGEAKLGIMPGYIHTKGHVGIVSRSGTLTYEAVHQLTTAGIGQSTA 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID L+ F DE T++++M+GEIGG+AEEEAA+++ K KP++ Sbjct: 177 VGIGGDPVNGTNFIDTLKAFNEDEDTKAVIMIGEIGGTAEEEAAEWV----KANMTKPVI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI + GI +A +PA IG +L+ +L Sbjct: 233 GFIGGQTAPEGKRMGHAGAIISGGKGTAAEKIKTLNANGIEVAETPAVIGETLIRVL 289 >gi|37679219|ref|NP_933828.1| succinyl-CoA synthetase subunit alpha [Vibrio vulnificus YJ016] gi|320157038|ref|YP_004189417.1| succinyl-CoA ligase (ADP-forming) subunit beta [Vibrio vulnificus MO6-24/O] gi|37197962|dbj|BAC93799.1| succinyl-CoA synthetase, alpha subunit [Vibrio vulnificus YJ016] gi|319932350|gb|ADV87214.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio vulnificus MO6-24/O] Length = 290 Score = 342 bits (878), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 177/298 (59%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQALAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A++ AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALESAGVKTVKSLADIGQALREVTG 289 >gi|258434840|ref|ZP_05688914.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9299] gi|257849201|gb|EEV73183.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9299] Length = 302 Score = 342 bits (878), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 167/294 (56%), Positives = 220/294 (74%), Gaps = 9/294 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-STKIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A SVIYVP A D+I+E+ +A++ +++CITE IPVLDMV+VK L+ Sbjct: 56 TVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWI----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+ Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLI 285 >gi|221142036|ref|ZP_03566529.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus str. JKD6009] gi|304381190|ref|ZP_07363843.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|269940738|emb|CBI49119.1| putative succinyl-CoA ligase [Staphylococcus aureus subsp. aureus TW20] gi|302751069|gb|ADL65246.1| succinate--CoA ligase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340173|gb|EFM06114.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|329313915|gb|AEB88328.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus T0131] Length = 302 Score = 342 bits (878), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 168/295 (56%), Positives = 220/295 (74%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTKIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A SVIYVP A D+I+E+ +A++ +++CITE IPVLDMV+VK L+ Sbjct: 56 TVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHEKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWI----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIE 286 >gi|165918999|ref|ZP_02219085.1| succinate-CoA ligase (ADP-forming), alpha subunit [Coxiella burnetii RSA 334] gi|165917324|gb|EDR35928.1| succinate-CoA ligase (ADP-forming), alpha subunit [Coxiella burnetii RSA 334] Length = 294 Score = 342 bits (878), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 175/299 (58%), Positives = 224/299 (74%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK T+VL QG TGK GTFH+EQAI Y TQ+VGG+ P KG G +P+F Sbjct: 1 MSILIDKETRVLCQGFTGKQGTFHSEQAIEY-GTQMVGGVTPGKGGQSHLG----LPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E T+A+A++I+VP D+I E+++A + L+VCITEGIPVLDM+ VKA L + Sbjct: 56 SVHEAVEETSADATMIFVPAPFCKDSISEAVDAGVRLVVCITEGIPVLDMLEVKAYLRQH 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPNCPG++TP CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q G GQST Sbjct: 116 PDVRMIGPNCPGVITPGECKIGIMPGHIHQRGKVGIVSRSGTLTYEAVNQTTQMGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT FIDVLE+F D T++IVMVGEIGG+AEEEAA+F++ KKP+ Sbjct: 176 CVGIGGDPIPGTSFIDVLEMFEKDSQTQAIVMVGEIGGTAEEEAAEFIQSNV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + ++AG TAPPG+ MGHAGA+I+GGKG A DK A++ AG+ + SPA IG+ + E G Sbjct: 232 ISYIAGVTAPPGKRMGHAGAIIAGGKGTAADKYAALEAAGVFVVKSPAEIGKGVAEATG 290 >gi|163792308|ref|ZP_02186285.1| succinyl-CoA synthetase subunit alpha [alpha proteobacterium BAL199] gi|159182013|gb|EDP66522.1| succinyl-CoA synthetase subunit alpha [alpha proteobacterium BAL199] Length = 291 Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 189/294 (64%), Positives = 237/294 (80%), Gaps = 8/294 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLVDKNTKVICQGFTGSQGTFHSEQAIKY-GTKIVGGVTPGKGGQSHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T ANASVIYVPP A D+I+E+I+AE+PL++CITEGIPVLDM++VK L + Sbjct: 56 TVHEAVAKTGANASVIYVPPPFAADSILEAIDAELPLVICITEGIPVLDMLKVKRSLSGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TPD+CKIGIMPG I ++G +GI+S+SGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPDACKIGIMPGHIHKRGKIGIVSKSGTLTYEAVAQTTAAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLE+FLAD+ T+ I+M+GEIGGSAEEEAA+FLK KKP+ Sbjct: 176 VGIGGDPVNGTSFIDVLEMFLADDETQGIIMIGEIGGSAEEEAAEFLKTSK---VKKPVA 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG TAPPGR MGHAGA+I+GGKGGA+DK+ AM+ AGI ++ SPA++G +++ Sbjct: 233 GFIAGVTAPPGRRMGHAGAIIAGGKGGADDKMEAMRAAGIKVSASPAKLGETML 286 >gi|283470459|emb|CAQ49670.1| succinate-CoA ligase, alpha subunit subfamily [Staphylococcus aureus subsp. aureus ST398] Length = 302 Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 169/297 (56%), Positives = 223/297 (75%), Gaps = 13/297 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV--NVPV 58 MS+ +DKNTKV+VQG+TG FHT+Q + Y T++V G+ P KG G V +VPV Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTKIVAGVTPGKG------GQVVESVPV 53 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV EAK T A SVIYVP A D+I+E+ +A++ +++CITE IPVLDMV+VK L+ Sbjct: 54 FNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQ 113 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+ Sbjct: 114 GRKTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQT 173 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++ K KP Sbjct: 174 TAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWI----KANMTKP 229 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 +VGF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+E Sbjct: 230 VVGFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIE 286 >gi|301121760|ref|XP_002908607.1| succinyl-CoA ligase subunit alpha, mitochondrial precursor [Phytophthora infestans T30-4] gi|262103638|gb|EEY61690.1| succinyl-CoA ligase subunit alpha, mitochondrial precursor [Phytophthora infestans T30-4] Length = 339 Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 178/296 (60%), Positives = 222/296 (75%), Gaps = 8/296 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + ++K+TKV+ QG TGK GTFH++QAI Y T +VGG+ PKKG + ++ +PVF TV Sbjct: 47 VWINKDTKVICQGFTGKQGTFHSQQAIEY-GTNMVGGVTPKKGGST----HLGLPVFNTV 101 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSS 121 AEAK+ T A+ASVIYVPP +IIE+IEA+IPL+V ITEGIP DMV+VK L +S+ Sbjct: 102 AEAKKETGADASVIYVPPPFCAASIIEAIEAKIPLVVAITEGIPQQDMVKVKWHLRNQST 161 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CK+GIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQST + Sbjct: 162 TRLIGPNCPGIIKPGECKMGIMPGYIHQKGKIGIVSRSGTLTYEAVAQTTALGLGQSTVI 221 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE F D TE I+MVGEIGGSAEEEAA++L A KP+V Sbjct: 222 GIGGDPFNGTNFIDCLERFTNDPETEGIIMVGEIGGSAEEEAAEWLM--AHGDPNKPVVS 279 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A K A++ AG+ + SPAR+G +L E + Sbjct: 280 FIAGTTAPPGRRMGHAGAIVSGGKGTAAGKFAALEAAGVAVTRSPARLGVTLYEEM 335 >gi|224125650|ref|XP_002329684.1| predicted protein [Populus trichocarpa] gi|222870592|gb|EEF07723.1| predicted protein [Populus trichocarpa] Length = 330 Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 182/296 (61%), Positives = 228/296 (77%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF TV Sbjct: 36 VFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNTV 90 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 AEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMVRVKA L + + Sbjct: 91 AEAKAETKANASVIYVPPPFAAAAILEAMEAELNLVVCITEGIPQHDMVRVKAALNRQTK 150 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMP I + G +GI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 151 TRLIGPNCPGIIKPGECKIGIMPAYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCV 210 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D +E FL D TE I+++GEIGG+AEE+AA +K+ G +KP+V Sbjct: 211 GIGGDPFNGTNFVDCIEKFLVDPQTEGIILIGEIGGTAEEDAAALIKES---GTEKPVVA 267 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DKI ++EAG+ + SPA+IG +++++ Sbjct: 268 FIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVAMLDVF 323 >gi|307103074|gb|EFN51338.1| hypothetical protein CHLNCDRAFT_141133 [Chlorella variabilis] Length = 330 Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 186/297 (62%), Positives = 227/297 (76%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK+TKV+VQG TGK GTFH+EQAI Y TQVVGG++PKKG T G +PVF + Sbjct: 36 AVFVDKDTKVIVQGFTGKNGTFHSEQAIQY-GTQVVGGVNPKKGGTTHLG----LPVFAS 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE T +A+ IYVPP GA AI+E++EAE+ L+VCITE IP DMVRVK L E+S Sbjct: 91 VREAKEATGCHATAIYVPPPGAAKAILEAVEAELDLVVCITEAIPQHDMVRVKKVLSEQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I G +GI+SRSGTLTYEAVFQT+ EGLGQST Sbjct: 151 KTRLIGPNCPGIIKPGECKIGIMPGYIHTPGKIGIVSRSGTLTYEAVFQTTNEGLGQSTV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE I+M+GEIGGSAEEEAA+FL G KP+V Sbjct: 211 VGIGGDPFNGTNFVDCLERFVLDPQTEGIIMIGEIGGSAEEEAAEFL---IASGTTKPVV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKG A+DKI A++ AG+ + SPA++G ++ ++ Sbjct: 268 SFIAGLTAPPGRRMGHAGAIISGGKGTAQDKIKALEAAGVTVTNSPAQMGVTMKRVM 324 >gi|304311201|ref|YP_003810799.1| Succinyl-CoA ligase, alpha subunit [gamma proteobacterium HdN1] gi|301796934|emb|CBL45147.1| Succinyl-CoA ligase, alpha subunit [gamma proteobacterium HdN1] Length = 290 Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 225/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QGLTG GT H++QA+ Y T++VGG+ P KG T+ ++ +PVF Sbjct: 1 MSVLINKDTKVICQGLTGSQGTMHSQQAMEY-GTKMVGGVTPGKGGTH----HIGLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E T A+ASVIYVP + D+I+E+ +A +PLIVCITEGIP LDM+ VK + Sbjct: 56 TVAEAREATGADASVIYVPAAFCKDSILEAADAGVPLIVCITEGIPALDMLYVKEYVMAK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+TP CKIGIMPG I G VGI+SRSGTLTYE V QT+ G GQST Sbjct: 116 GLRLIGPNCPGIITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYECVAQTTVLGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+LF D TE+I+MVGEIGGSAEEEAA F+K+ KKP+V Sbjct: 176 IGIGGDPIPGTTFIDALKLFQDDPQTEAIIMVGEIGGSAEEEAAAFIKEYV----KKPMV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+I+GGKG A++K A+ +AG+ + +PA IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIIAGGKGTADEKFAALSDAGVAVCRNPAEIGKTLKEITG 289 >gi|254447449|ref|ZP_05060915.1| succinyl-CoA synthetase alpha chain [gamma proteobacterium HTCC5015] gi|198262792|gb|EDY87071.1| succinyl-CoA synthetase alpha chain [gamma proteobacterium HTCC5015] Length = 290 Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 180/298 (60%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KNTKVL QG TGK GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLVNKNTKVLCQGFTGKQGTFHSEQALEY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A ASVIYVP D+IIE+ EA I L+VCITEGIP LDM+ K +++ Sbjct: 56 TVKEAVAQTGATASVIYVPAPFCKDSIIEAAEAGIELVVCITEGIPTLDMLEAKMVVDQL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+TP CKIGIMPG I + G VGI+SRSGTLTYEAV QTS G GQST Sbjct: 116 GVRLIGPNCPGIITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTSDLGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+LF D TE+IVMVGEIGG+AEEEAA+F+K+ KP+V Sbjct: 176 IGIGGDPIPGTGFIDALQLFQDDPQTEAIVMVGEIGGTAEEEAAEFIKEHV----DKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A DK A++ AG+ SPA +G++L L+G Sbjct: 232 SYIAGVTAPKGKRMGHAGAIIAGGKGTAADKFAALQAAGVATVDSPADMGKALETLIG 289 >gi|85058857|ref|YP_454559.1| succinyl-CoA synthetase subunit alpha [Sodalis glossinidius str. 'morsitans'] gi|84779377|dbj|BAE74154.1| succinyl-CoA synthase alpha subunit [Sodalis glossinidius str. 'morsitans'] Length = 290 Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 177/297 (59%), Positives = 223/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQALAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VKA+LE+S Sbjct: 56 TVREAVDKTGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLTVKAKLEQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYE V QT+ GLGQS+ Sbjct: 116 KARMIGPNCPGVITPGECKIGIMPGHIHQPGRVGIVSRSGTLTYEVVKQTTDTGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+G KG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGSKGTADEKFAALEAAGVKTVRSLADIGEALKFIL 288 >gi|167624408|ref|YP_001674702.1| succinyl-CoA synthetase subunit alpha [Shewanella halifaxensis HAW-EB4] gi|167354430|gb|ABZ77043.1| succinyl-CoA synthetase, alpha subunit [Shewanella halifaxensis HAW-EB4] Length = 290 Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 177/293 (60%), Positives = 220/293 (75%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVEVTGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPLTEAIVMIGEIGGTAEEEAAEYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++EAG+ S A IG++L Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFAALEEAGVTTVRSLADIGKAL 284 >gi|260767660|ref|ZP_05876595.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio furnissii CIP 102972] gi|260617169|gb|EEX42353.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio furnissii CIP 102972] gi|315179508|gb|ADT86422.1| succinyl-CoA synthetase subunit alpha [Vibrio furnissii NCTC 11218] Length = 290 Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 178/298 (59%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIQLIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A++ AG+ S A IG +L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALESAGVKTVKSLAEIGSALREVTG 289 >gi|262276211|ref|ZP_06054020.1| succinyl-CoA ligase [ADP-forming] alpha chain [Grimontia hollisae CIP 101886] gi|262220019|gb|EEY71335.1| succinyl-CoA ligase [ADP-forming] alpha chain [Grimontia hollisae CIP 101886] Length = 290 Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 177/293 (60%), Positives = 221/293 (75%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIEY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP LDM+ VK +L+++ Sbjct: 56 TVAEAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTLDMLEVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFEEDPQTEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVTTVKSLADIGKAL 284 >gi|251790491|ref|YP_003005212.1| succinyl-CoA synthetase subunit alpha [Dickeya zeae Ech1591] gi|247539112|gb|ACT07733.1| succinyl-CoA synthetase, alpha subunit [Dickeya zeae Ech1591] Length = 290 Score = 342 bits (876), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 178/297 (59%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG G+FH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGSFHSEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +LE+S Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIQLIICITEGIPTLDMLTVKVKLEQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP +CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGACKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKSVL 288 >gi|239636274|ref|ZP_04677276.1| succinate-CoA ligase, alpha subunit family [Staphylococcus warneri L37603] gi|239597629|gb|EEQ80124.1| succinate-CoA ligase, alpha subunit family [Staphylococcus warneri L37603] Length = 301 Score = 342 bits (876), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 167/295 (56%), Positives = 221/295 (74%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MSVFIDKNTKVIVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK+ T AN SV+YVP A D+I+E+ +AE+ +++CITE IPV+DMV+VK L+ Sbjct: 56 TVEEAKQETGANVSVVYVPAPFAADSILEAADAELDMVICITEHIPVVDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T+++VM+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPETKAVVMIGEIGGTAEEEAAEWI----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTASEKIKTLNSCGVETANTPSEIGTTLIE 286 >gi|302332852|gb|ADL23045.1| succinate--CoA ligase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus JKD6159] Length = 302 Score = 342 bits (876), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 168/295 (56%), Positives = 221/295 (74%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTKIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A SVIYVP A D+I+E+ +A++ +++CITE IPVLDMV+VK L+ Sbjct: 56 TVEEAKNETGATVSVIYVPALFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWI----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNICGVKTAATPSEIGSTLIE 286 >gi|94313283|ref|YP_586492.1| succinyl-CoA synthetase, subunit alpha [Cupriavidus metallidurans CH34] gi|93357135|gb|ABF11223.1| succinyl-CoA synthetase, alpha subunit [Cupriavidus metallidurans CH34] Length = 290 Score = 342 bits (876), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 187/293 (63%), Positives = 229/293 (78%), Gaps = 8/293 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D++T+V+ QG TG GTFH+EQA+ Y T++VGG+ P KG G +PVF Sbjct: 1 MAVLIDQHTRVICQGFTGAQGTFHSEQALAY-GTKMVGGVTPGKGGETHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+ A T A+ASVIYVPP A DAI+E+++A I LIVCITEGIPV+DMVRVK L S Sbjct: 56 TVSAAAHATGADASVIYVPPPFAADAILEAVDAGIGLIVCITEGIPVIDMVRVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRL+GPNCPG++TP CKIGIMPG I + G +G++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 ASRLVGPNCPGVITPGQCKIGIMPGHIHKPGRIGVVSRSGTLTYEAVAQTTATGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT FID LELFLAD+ TE I+M+GEIGGSAEEEAAQFL+D R KP+V Sbjct: 176 IGIGGDPVNGTNFIDSLELFLADDQTEGIIMIGEIGGSAEEEAAQFLRDARTR---KPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 GF+AG TAPPGR MGHAGA+ISGG G AE KI AM+EAGI +A SPA +G ++ Sbjct: 233 GFIAGSTAPPGRRMGHAGAIISGGTGTAEAKIEAMREAGIHVAASPAELGNTM 285 >gi|269103072|ref|ZP_06155769.1| succinyl-CoA ligase [ADP-forming] alpha chain [Photobacterium damselae subsp. damselae CIP 102761] gi|268162970|gb|EEZ41466.1| succinyl-CoA ligase [ADP-forming] alpha chain [Photobacterium damselae subsp. damselae CIP 102761] Length = 290 Score = 342 bits (876), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 177/297 (59%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGSTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP LDM+ VK RL+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTLDMLDVKVRLDQA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I + G+VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKAGNVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L +F D AT++IVM+GEIGG+AEE+AA ++K KP+V Sbjct: 176 VGIGGDPIPGSSFIDILAMFEQDPATDAIVMIGEIGGTAEEDAAAYIKQHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG L E++ Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVRTVKSLADIGLVLREVM 288 >gi|161831593|ref|YP_001597237.1| succinate-CoA ligase (ADP-forming), alpha subunit [Coxiella burnetii RSA 331] gi|161763460|gb|ABX79102.1| succinate-CoA ligase (ADP-forming), alpha subunit [Coxiella burnetii RSA 331] Length = 294 Score = 342 bits (876), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 174/299 (58%), Positives = 225/299 (75%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK T+VL QG TGK GTFH+EQAI Y TQ+VGG+ P KG ++ +P+F Sbjct: 1 MSILIDKETRVLCQGFTGKQGTFHSEQAIEY-GTQMVGGVTPGKGGQ----SHLGLPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E T+A+A++I+VP D+IIE+++A + L+VCITEGIPVLDM+ VKA L + Sbjct: 56 SVHEAVEETSADATMIFVPAPFCKDSIIEAVDAGVRLVVCITEGIPVLDMLEVKAYLRQH 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPNCPG++TP CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q G GQST Sbjct: 116 PDVRMIGPNCPGVITPGECKIGIMPGHIHQRGKVGIVSRSGTLTYEAVNQTTQMGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT FI VLE+F D T++IVMVGEIGG+AEEEAA+F++ KKP+ Sbjct: 176 CVGIGGDPIPGTSFIGVLEMFEKDSQTQAIVMVGEIGGTAEEEAAEFIQSNV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + ++AG TAPPG+ MGHAGA+I+GGKG A DK A++ AG+ + SPA IG+ + E G Sbjct: 232 ISYIAGVTAPPGKRMGHAGAIIAGGKGTAADKYAALEAAGVFVVKSPAEIGKGVAEATG 290 >gi|299536762|ref|ZP_07050070.1| succinyl-CoA synthetase subunit alpha [Lysinibacillus fusiformis ZC1] gi|298727774|gb|EFI68341.1| succinyl-CoA synthetase subunit alpha [Lysinibacillus fusiformis ZC1] Length = 300 Score = 342 bits (876), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 223/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++ ++K+TKV+VQG+TG+ FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MAVFINKDTKVIVQGITGETALFHTKQMLEY-GTKIVAGVTPGKGGLEIEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A SVIYVP A DAI+E+++AE+ L +CITE IPVLDMV+VK +E Sbjct: 56 TVAEAVAATGATTSVIYVPAPFAADAILEAVDAELELTICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RL+GPNCPG++T D CKIGIMPG I KG VG++SRSGTLTYEAV Q +Q G+GQ+TA Sbjct: 116 NTRLVGPNCPGVITADECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLTQAGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLE F D T ++VM+GEIGG+AEEEAA ++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLEAFNNDPETYAVVMIGEIGGTAEEEAAAWI----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI AM EAGI +A +P+ IG +L++++ Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKAMNEAGIEVAETPSVIGETLIKVI 288 >gi|271499754|ref|YP_003332779.1| succinyl-CoA synthetase subunit alpha [Dickeya dadantii Ech586] gi|270343309|gb|ACZ76074.1| succinyl-CoA synthetase, alpha subunit [Dickeya dadantii Ech586] Length = 290 Score = 341 bits (875), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 178/297 (59%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG G+FH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGSFHSEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +LE+S Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIQLIICITEGIPTLDMLTVKVKLEQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP +CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGACKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKAVL 288 >gi|327441067|dbj|BAK17432.1| succinyl-CoA synthetase, alpha subunit [Solibacillus silvestris StLB046] Length = 300 Score = 341 bits (875), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 170/297 (57%), Positives = 223/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K TKV+VQG+TG+ FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MSVFINKETKVIVQGITGETALFHTKQMLEY-GTKIVAGVTPGKGGLEIEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T AN SVIYVP A DAIIE+++A++ + +CITE IPVLDMV+VK +E Sbjct: 56 TVQEAVDATGANVSVIYVPAPFAADAIIEAVDADLDMAICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I KG VG++SRSGTLTYEAV Q SQ G+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLSQAGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID L+ F D T ++VM+GEIGG+AEEEAA+++++ KP+V Sbjct: 176 VGIGGDPVNGTNFIDCLKAFNEDPETYAVVMIGEIGGTAEEEAAEWIQEN----MNKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI AM AGI +AP+P+ IG +L++++ Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKAMNAAGIEVAPTPSVIGETLIKVI 288 >gi|59711433|ref|YP_204209.1| succinyl-CoA synthetase subunit alpha [Vibrio fischeri ES114] gi|197336007|ref|YP_002155588.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio fischeri MJ11] gi|59479534|gb|AAW85321.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Vibrio fischeri ES114] gi|197317497|gb|ACH66944.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio fischeri MJ11] Length = 290 Score = 341 bits (875), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 179/298 (60%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIDY-GTQMVGGVSPGKGGQVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+A I LIV ITEGIP LD++ VK RL+ Sbjct: 56 TVRDAVEATGATASVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTLDLLDVKVRLDAE 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++EAG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEEAGVKTVKSLADIGKALREVTG 289 >gi|301156159|emb|CBW15630.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Haemophilus parainfluenzae T3T1] Length = 289 Score = 341 bits (874), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 178/297 (59%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K TKV+ QG TG GTFH EQA+ Y T++VGGI P KG T G +PVF Sbjct: 1 MAILINKETKVICQGFTGAQGTFHCEQALAY-GTKLVGGISPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A A++IYVP DAI+E+I+A I L+VCITEGIP LDM+ VK +L ++ Sbjct: 56 TVREAVQATGATATMIYVPAPFCKDAILEAIDAGIQLVVCITEGIPTLDMLLVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMPG+I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPGNIHKKGRVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+ F D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKRFQEDPETEAIVMIGEIGGSAEEEAAAFIKSHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG AEDKI A++ AG+ S A IG +L ELL Sbjct: 232 AYIAGVTAPKGKRMGHAGAIISGGKGTAEDKIAALEAAGVKTVRSLAEIGSALRELL 288 >gi|56416521|ref|YP_153595.1| succinyl-CoA ligase chain A [Anaplasma marginale str. St. Maries] gi|222474889|ref|YP_002563304.1| succinyl-CoA ligase chain A (sucD) [Anaplasma marginale str. Florida] gi|255002861|ref|ZP_05277825.1| succinyl-CoA ligase chain A (sucD) [Anaplasma marginale str. Puerto Rico] gi|56387753|gb|AAV86340.1| succinyl-CoA ligase chain A [Anaplasma marginale str. St. Maries] gi|222419025|gb|ACM49048.1| succinyl-CoA ligase chain A (sucD) [Anaplasma marginale str. Florida] Length = 294 Score = 341 bits (874), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 188/298 (63%), Positives = 230/298 (77%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNT+V+ QG TG GTFH+EQAI Y T+VVGG+ P KG T G +PVF Sbjct: 1 MSVLVDKNTRVICQGFTGSNGTFHSEQAIAY-GTKVVGGVTPGKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +AK T ANASVIYVP A DAI E+IEAEI LIVCITEGIPVLDMV+VK L S Sbjct: 56 TVLQAKVETQANASVIYVPAPYAADAIFEAIEAEIELIVCITEGIPVLDMVQVKRALAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR+IGPNCPGI+TP+ CKIGIMPG I +KG++G++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRMIGPNCPGIITPEECKIGIMPGYIHKKGNIGVVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+D ++LFL DE T IV++GEIGGS EEEA +FL+ G KKP+V Sbjct: 176 IGIGGDPVHGMSFLDCVQLFLEDEDTHGIVIIGEIGGSEEEEAVEFLQSS---GTKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GFVAG+TAPPG+ MGHAGA+ SG G A+ KI MK AG+ +A +PA IG+++++++G Sbjct: 233 GFVAGQTAPPGKRMGHAGAISSGSSGTAKGKIEFMKRAGVAVAETPAVIGKTVLDVMG 290 >gi|261856575|ref|YP_003263858.1| succinyl-CoA synthetase, subunit alpha [Halothiobacillus neapolitanus c2] gi|261837044|gb|ACX96811.1| succinyl-CoA synthetase, alpha subunit [Halothiobacillus neapolitanus c2] Length = 295 Score = 341 bits (874), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 177/301 (58%), Positives = 221/301 (73%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K T+V+ QG TGK GTFH+EQAI Y T VGG+ P KG +++ PVF Sbjct: 1 MSILINKQTRVICQGFTGKQGTFHSEQAIAY-GTNFVGGVTPGKGGQ----SHLDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TV +A ++TAA AS+IYVP A DAI+E+ +A I +I CITEGIPVLDM+ VKA L + Sbjct: 56 TVHDAVQQTAATASMIYVPAPFAADAILEAADAGIEVIACITEGIPVLDMLNVKAVLASD 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RLIGPNCPG++TP CKIGIMPGSI G +GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 116 YPDVRLIGPNCPGLITPGECKIGIMPGSIHLPGRIGIVSRSGTLTYEAVAQTTAAGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ G +FID L LF D TE+++MVGEIGG+AEEEAA F+K++ KP Sbjct: 176 TCVGIGGDPIHGMDFIDCLALFADDPQTEAVIMVGEIGGNAEEEAAHFIKEQ----FNKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V ++AG TAP G+ MGHAGAVI+GG+G AEDK A+K AG+ I P +GR++ LLG Sbjct: 232 VVAYIAGATAPTGKRMGHAGAVIAGGRGSAEDKFRALKAAGVHIVRDPTTMGRTMANLLG 291 Query: 299 S 299 S Sbjct: 292 S 292 >gi|37525387|ref|NP_928731.1| succinyl-CoA synthetase subunit alpha [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784814|emb|CAE13726.1| succinyl-CoA synthetase alpha chain [Photorhabdus luminescens subsp. laumondii TTO1] Length = 291 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 177/297 (59%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLAVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I R G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHRAGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQQDPQTEAIVMIGEIGGTAEEEAAAYIKQHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +LL Sbjct: 232 AYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKDLL 288 >gi|269959064|ref|YP_003328853.1| succinyl-CoA synthetase, alpha subunit [Anaplasma centrale str. Israel] gi|269848895|gb|ACZ49539.1| succinyl-CoA synthetase, alpha subunit [Anaplasma centrale str. Israel] Length = 293 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 188/298 (63%), Positives = 230/298 (77%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNT+V+ QG TG GTFH+EQAI Y T+VVGG+ P KG T G +PVF Sbjct: 1 MSVLVDKNTRVICQGFTGSNGTFHSEQAIAY-GTKVVGGVTPGKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +AK T ANASVIYVP A DAI E+IEAEI LIVCITEGIPVLDMV+VK L S Sbjct: 56 TVLQAKVETQANASVIYVPAPYAADAIFEAIEAEIELIVCITEGIPVLDMVQVKRALAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR+IGPNCPGI+TP+ CKIGIMPG I +KG++G++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRMIGPNCPGIITPEECKIGIMPGYIHKKGNIGVVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+D ++LFL DE T IV++GEIGGS EEEA +FL+ G KKP+V Sbjct: 176 IGIGGDPVHGMSFLDCVQLFLEDEDTHGIVIIGEIGGSEEEEAVEFLQSS---GTKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GFVAG+TAPPG+ MGHAGA+ SG G A+ KI MK AG+ +A +PA IG+++++++G Sbjct: 233 GFVAGQTAPPGKRMGHAGAISSGSSGTAKGKIEFMKRAGVAVAETPAVIGKTVLDVMG 290 >gi|56460606|ref|YP_155887.1| succinyl-CoA synthetase, alpha subunit [Idiomarina loihiensis L2TR] gi|56179616|gb|AAV82338.1| Succinyl-CoA synthetase, alpha subunit [Idiomarina loihiensis L2TR] Length = 290 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 178/298 (59%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+IIE+ +A I LIVCITEGIP LDM+ VK L Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSIIEAADAGIELIVCITEGIPTLDMLYVKEYLTHK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ G GQS+ Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDAGFGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LELF D TE+IVM+GEIGG+AEEEAA+++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILELFEKDPETEAIVMIGEIGGTAEEEAAEYIKNNV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+I+GGKG A++K A++ AG+ S A IG+++ E G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGKAVAEKTG 289 >gi|119774567|ref|YP_927307.1| succinyl-CoA synthetase alpha chain [Shewanella amazonensis SB2B] gi|119767067|gb|ABL99637.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella amazonensis SB2B] Length = 290 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 178/298 (59%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVAATGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L E G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKALREKTG 289 >gi|253701391|ref|YP_003022580.1| succinyl-CoA synthetase, subunit alpha [Geobacter sp. M21] gi|251776241|gb|ACT18822.1| succinyl-CoA synthetase, alpha subunit [Geobacter sp. M21] Length = 308 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNTKV+ QG+TG G FH + A Y TQ+VGG+ P KG T G PVF Sbjct: 1 MSILVDKNTKVITQGITGSTGLFHAQGAREY-GTQMVGGVTPGKGGTSVDG----FPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+T A ASVIYVPP A D+I+E+I+A + L+ CITEGIPVLDMV+VK ++ Sbjct: 56 TVAEAVEQTGATASVIYVPPPFAADSIMEAIDAGLDLVCCITEGIPVLDMVKVKQYMQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I R G VG++SRSGTLTYEAV+Q + GLGQST Sbjct: 116 KTRLIGPNCPGVITPGQCKIGIMPGYIHRPGKVGVVSRSGTLTYEAVWQLTGYGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT +D L +F D TE+++M+GEIGGSAEEEAA F+++ KP+ Sbjct: 176 VGIGGDPVNGTSHLDCLRMFEEDPDTEAVIMIGEIGGSAEEEAAYFVREH----MTKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG+TAPPG+ MGHAGA+ISGGKG A +K+ ++ GI +A +PA + ++L+++ Sbjct: 232 GYIAGRTAPPGKRMGHAGAIISGGKGTAAEKVAILESCGISVAATPAEMAQALMKVY 288 >gi|302851434|ref|XP_002957241.1| succinate-coa ligase alpha chain, succinyl-CoA synthetase mitochondrial precursor [Volvox carteri f. nagariensis] gi|300257491|gb|EFJ41739.1| succinate-coa ligase alpha chain, succinyl-CoA synthetase mitochondrial precursor [Volvox carteri f. nagariensis] Length = 328 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 183/297 (61%), Positives = 228/297 (76%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNTKV+ QG+TGK GTFHTEQAI Y TQ+VGG+ PKKG + G +PVF + Sbjct: 34 AVFVDKNTKVICQGITGKNGTFHTEQAIAY-GTQMVGGVTPKKGGSTHLG----LPVFNS 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAK T +ASVIYVPP A AI+E++EAE+ L+VCITEGIP DMV+VK L E+S Sbjct: 89 VKEAKSATGCHASVIYVPPPFAARAILEAVEAELDLVVCITEGIPQHDMVKVKKTLQEQS 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I G +GI+SRSGTLTYEAVFQT+ +GLGQST Sbjct: 149 KTRLIGPNCPGIIKPGECKIGIMPGYIHTPGKIGIVSRSGTLTYEAVFQTTNQGLGQSTV 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE I+M+GEIGG+AEEEAA+F+K G +KP+V Sbjct: 209 VGIGGDPFNGTNFVDCLERFVKDPQTEGIIMIGEIGGTAEEEAAEFIKAS---GTQKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKG A DKI A++ AG+ + SPA++G +++ ++ Sbjct: 266 SFIAGLTAPPGRRMGHAGAIISGGKGRASDKIEALESAGVTVTRSPAQMGSTMMRVM 322 >gi|226491860|ref|NP_001149702.1| succinyl-CoA ligase alpha-chain 2 [Zea mays] gi|195629598|gb|ACG36440.1| succinyl-CoA ligase alpha-chain 2 [Zea mays] Length = 331 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 181/297 (60%), Positives = 228/297 (76%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK+T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF + Sbjct: 36 AVFVDKSTRVICQGITGKNGTFHTEQAIEY-GTNMVGGVTPKKGGTEHLG----LPVFNS 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEAK T ANA+VIYVPP A AI+E++EAE+ L VCITEGIP DMV+VKA L +S Sbjct: 91 VAEAKAETKANATVIYVPPPFAAAAIMEAMEAELDLAVCITEGIPQHDMVKVKAALNSQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 151 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTC 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE IV++GEIGG+AEE+AA F+++ +KP+V Sbjct: 211 VGIGGDPFNGTNFVDCLEKFVNDPQTEGIVLIGEIGGTAEEDAATFIQESKT---QKPVV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+++GGKG A+DKI A++EAG+ + SPA+IG ++ E+ Sbjct: 268 AFIAGLTAPPGRRMGHAGAIVAGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIF 324 >gi|196015167|ref|XP_002117441.1| hypothetical protein TRIADDRAFT_61514 [Trichoplax adhaerens] gi|190579970|gb|EDV20057.1| hypothetical protein TRIADDRAFT_61514 [Trichoplax adhaerens] Length = 327 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 174/297 (58%), Positives = 217/297 (73%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I++ K T+V+ QG TG+ GTFH+EQAI Y T +VGG+ P KG G +PVF + Sbjct: 30 NIMIGKETRVICQGFTGRQGTFHSEQAIAY-GTNMVGGVSPGKGGKTHLG----LPVFNS 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR-LEKS 120 V EA + T A A+VIYVPP GA AI E+++A I LIVCITEGIP DMV+VK + L + Sbjct: 85 VQEAVDSTGAEATVIYVPPQGAAAAIHEAVDAGIGLIVCITEGIPQQDMVKVKHKILRQD 144 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P CKIGIMP I G +GI+SRSGTLTYEAVFQT+ GLGQ+ Sbjct: 145 KSRLIGPNCPGIIRPGHCKIGIMPAHIHLPGRIGIVSRSGTLTYEAVFQTTNVGLGQTLC 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID L++FL D+ TE IV++GEIGG AEE+AA+FL KP+V Sbjct: 205 VGIGGDPFNGTDFIDCLDIFLKDDKTEGIVLIGEIGGEAEEKAAEFLAKHNSGPNAKPVV 264 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKGGAE+KI ++ AG+ + SPARIG ++ E + Sbjct: 265 SFIAGITAPPGRRMGHAGAIISGGKGGAEEKIATLEGAGVVVTKSPARIGSTIKEAM 321 >gi|163752207|ref|ZP_02159409.1| succinyl-CoA synthase, alpha subunit [Shewanella benthica KT99] gi|161327888|gb|EDP99066.1| succinyl-CoA synthase, alpha subunit [Shewanella benthica KT99] Length = 290 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 178/293 (60%), Positives = 218/293 (74%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAIDY-GTQMVGGVSPGKGGKVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKEAVAETGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLELF D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLELFQNDPQTEAIVMIGEIGGTAEEEAAEYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKAL 284 >gi|78221950|ref|YP_383697.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Geobacter metallireducens GS-15] gi|78193205|gb|ABB30972.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Geobacter metallireducens GS-15] Length = 291 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 167/298 (56%), Positives = 227/298 (76%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K++K++VQG+TG++G FHT+Q Y +++V G+ P KG + G +PVF Sbjct: 1 MSILINKDSKIVVQGITGRSGLFHTQQCRDY-GSRIVAGVTPGKGGIHIEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T AN S+I+VPP GA DAI+E+ +A + L VCITEGIPV DMV VK L+ S Sbjct: 56 TVEEAVRYTGANVSMIFVPPPGAADAILEAADAGVDLAVCITEGIPVRDMVPVKRILQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CK+GIMPG I + G +G++SRSGTLTYEAV Q ++ GLGQST Sbjct: 116 KTRLVGPNCPGVITPGECKVGIMPGYIHKPGKIGVVSRSGTLTYEAVKQITEAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G +FIDVL+LF D+ TE++ M+GEIGGSAEE+AA+++++ KKP+ Sbjct: 176 VGIGGDPIIGMQFIDVLKLFNEDKQTEAVFMIGEIGGSAEEDAAEWIRENM----KKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPG+ MGHAGA+I+GGKG AEDKI + E G+ +APSP ++G +++E LG Sbjct: 232 AFIAGVTAPPGKRMGHAGAIITGGKGKAEDKIRTLGECGVVVAPSPTKMGAAMLEALG 289 >gi|320539329|ref|ZP_08038998.1| putative succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Serratia symbiotica str. Tucson] gi|320030454|gb|EFW12464.1| putative succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Serratia symbiotica str. Tucson] Length = 290 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 177/297 (59%), Positives = 223/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTQHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T ANASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGANASVIYVPALFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHQPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPILGSNFIDILKLFQQDPQTEAIVMIGEIGGSAEEEAAAYIKEYV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVL 288 >gi|294141503|ref|YP_003557481.1| succinyl-CoA synthase subunit alpha [Shewanella violacea DSS12] gi|293327972|dbj|BAJ02703.1| succinyl-CoA synthase, alpha subunit [Shewanella violacea DSS12] Length = 290 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 177/293 (60%), Positives = 219/293 (74%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIDY-GTQMVGGVSPGKGGKVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A ASVIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKEAVAQTGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLELF D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLELFQNDPQTEAIVMIGEIGGTAEEEAAEYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKAL 284 >gi|52840779|ref|YP_094578.1| succinyl CoA synthetase alpha chain [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627890|gb|AAU26631.1| succinyl CoA synthetase alpha chain [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 291 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 180/299 (60%), Positives = 222/299 (74%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDK+TKVL QG TGK GT+HTEQA+ Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLVDKHTKVLCQGFTGKQGTYHTEQALAY-GTKMVGGVTPGKGGQMHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA E T A+ASVIYVP D+IIE+ EA I LIVCITEG+PVLDM++VK +E + Sbjct: 56 TMREAVEETKADASVIYVPAPFCKDSIIEAAEAGIKLIVCITEGVPVLDMLQVKVYIENN 115 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +RLIGPNCPGI+TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ +G GQST Sbjct: 116 TQARLIGPNCPGIITPGECKIGIMPGYIHLPGKVGIVSRSGTLTYEAVKQTTDKGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT FID L LF D TE+I+MVGEIGGSAEEEAA+F+K KKP+ Sbjct: 176 CIGIGGDPIPGTSFIDALSLFEKDPKTEAIIMVGEIGGSAEEEAAEFIKSHV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG TAP G+ MGHAGA+ISGGKG A +K A++ AG+ SPA +G ++ E+ G Sbjct: 232 VSYIAGVTAPAGKRMGHAGAIISGGKGTAAEKYAALEAAGVKTVRSPADLGDAIAEVTG 290 >gi|283770309|ref|ZP_06343201.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus H19] gi|283460456|gb|EFC07546.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus H19] Length = 302 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 167/295 (56%), Positives = 220/295 (74%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTKIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A SVIYVP A D+I+E+ +A++ +++CITE IPVLDMV+VK L+ Sbjct: 56 TVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWI----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+ G+TAP G+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPLGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIE 286 >gi|115377068|ref|ZP_01464284.1| succinyl-CoA synthetase alpha chain [Stigmatella aurantiaca DW4/3-1] gi|310821310|ref|YP_003953668.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Stigmatella aurantiaca DW4/3-1] gi|115365907|gb|EAU64926.1| succinyl-CoA synthetase alpha chain [Stigmatella aurantiaca DW4/3-1] gi|309394382|gb|ADO71841.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Stigmatella aurantiaca DW4/3-1] Length = 299 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 176/297 (59%), Positives = 230/297 (77%), Gaps = 10/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+ +TKVL QG+TG AG+FH++Q + Y T++VGG+ P KG T + G VPVF Sbjct: 1 MSILVNHDTKVLCQGITGSAGSFHSKQMLEYG-TKLVGGVTPGKGGTDFEG---KVPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TVA+A ++T AN SV++VPP A D+I+E+ +A I LI+ ITEGIPV DMVR K LE K Sbjct: 57 TVADAVKQTGANTSVLFVPPPFAADSIMEAADAGIALIITITEGIPVNDMVRAKRYLEGK 116 Query: 120 SSSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RLIGPNCPG++TP++ CKIGIMPG I + G +G++SRSGTLTYEAV+Q +Q GLGQS Sbjct: 117 PGVRLIGPNCPGVITPEAKCKIGIMPGHIHKPGRIGVVSRSGTLTYEAVYQLTQLGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV GT F+DVL+LF AD T++++M+GEIGG+AEE+AA+++ E KP Sbjct: 177 TAVGIGGDPVNGTNFVDVLKLFNADPETDAVIMIGEIGGTAEEDAAKYVARE----FTKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 I GF+AG++APPG+ MGHAGA+ISGG+G A +KI AM+ AG +A SPA +G +L E Sbjct: 233 IAGFIAGQSAPPGKRMGHAGAIISGGQGTAAEKIKAMEAAGFLMAASPAELGTTLQE 289 >gi|281206773|gb|EFA80958.1| Endo-beta-N-acetylglucosaminidase [Polysphondylium pallidum PN500] Length = 1362 Score = 340 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 185/296 (62%), Positives = 227/296 (76%), Gaps = 8/296 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 +LVDKNTKV+ QGL GK GTFHT QAI Y TQ+VGG+ P KG T +P+F +V Sbjct: 27 VLVDKNTKVICQGL-GKQGTFHTLQAIDY-GTQMVGGVSPNKGGTKHEA--TKLPLFNSV 82 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 A+AK T ANASVIYVPP GA DAIIE+IEAE+ LIVCITEGIP DMVRVK L + + Sbjct: 83 ADAKRETGANASVIYVPPPGAADAIIEAIEAEMELIVCITEGIPQKDMVRVKYLLNRQNK 142 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST V Sbjct: 143 TRLIGPNCPGIIKPGECKIGIMPGHIHRPGKIGIVSRSGTLTYEAVAQTTAVGLGQSTCV 202 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D L+LF D TE I+++GEIGG AEEEAAQ+L++ KP+V Sbjct: 203 GIGGDPFNGTNFVDCLKLFTKDPQTEGIILIGEIGGEAEEEAAQWLRENPT---DKPVVS 259 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKGGA+ K+ A+++AG+ ++ SPA++G +++E + Sbjct: 260 FIAGLTAPPGRRMGHAGAIISGGKGGADSKMKALQDAGVIMSLSPAKLGTTMLEAM 315 >gi|52425406|ref|YP_088543.1| SucD protein [Mannheimia succiniciproducens MBEL55E] gi|52307458|gb|AAU37958.1| SucD protein [Mannheimia succiniciproducens MBEL55E] Length = 289 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 176/297 (59%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K TKV+ QG TG GTFH+EQA+ Y T++VGG+ P KG + G +PVF Sbjct: 1 MAILINKETKVICQGFTGGQGTFHSEQALAY-GTKLVGGVSPGKGGSIHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A A+VIYVP DAI+E+I A + LIVCITEGIP LDM++VK +L++S Sbjct: 56 TVKEAVEQTGATATVIYVPAPFCKDAILEAIAAGLKLIVCITEGIPTLDMLQVKQKLDES 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPGI+ PD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQS Sbjct: 116 GVVMIGPNCPGIIVPDECKIGIMPGYIHKKGRVGIVSRSGTLTYEAVKQTTDEGFGQSAC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+L+ AD TE+IVM+GEIGGSAEEEAA+F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLYQADPKTEAIVMIGEIGGSAEEEAAEFIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG A+DKI A++ AG+ S A IG +L +L Sbjct: 232 SYIAGITAPKGKRMGHAGAIISGGKGTADDKIAALQSAGVICVKSLADIGAALKTVL 288 >gi|170717676|ref|YP_001784751.1| succinyl-CoA synthetase, subunit alpha [Haemophilus somnus 2336] gi|168825805|gb|ACA31176.1| succinyl-CoA synthetase, alpha subunit [Haemophilus somnus 2336] Length = 290 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 174/297 (58%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++KNTKV+ QG TGK GTFH EQA+ Y TQ+VGG+ P K + G +PVF Sbjct: 1 MAILINKNTKVICQGFTGKQGTFHCEQALAY-GTQLVGGVSPGKSGSLHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A A++IYVP DAI+E+I+ I IVCITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVEKTGATATMIYVPAPFCKDAILEAIDGGIKFIVCITEGIPTLDMLEVKKKLQQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TP+ CK+GIMPG+I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 DVVMIGPNCPGVITPEECKMGIMPGNIHKKGRIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF AD T++IVM+GEIGGSAEEEAA F+ KP+V Sbjct: 176 VGIGGDPIPGSSFIDILKLFQADPETDAIVMIGEIGGSAEEEAADFIHKHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG AE+KI A+++AG+ S A IG+ L LL Sbjct: 232 AYIAGVTAPKGKRMGHAGAIISGGKGTAEEKIVALEKAGVKTVRSLADIGKVLRTLL 288 >gi|205373360|ref|ZP_03226164.1| succinyl-CoA synthetase subunit alpha [Bacillus coahuilensis m4-4] Length = 300 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 169/297 (56%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+TKV+VQG+TG FHT+Q + Y TQ+V G+ P K G VPVF Sbjct: 1 MSVFINKDTKVIVQGITGSTALFHTKQMLEY-GTQIVAGVTPGKAGQEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A T A SV+YVP A DAI+E+++AE+ L++CITE IPVLDMV+VK + Sbjct: 56 TVSDAVTETGATVSVVYVPAPFAADAILEAVDAELDLVICITEHIPVLDMVKVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+TPD CKIGIMPG I KG VG++SRSGTLTYEAV Q SQ G+GQSTA Sbjct: 116 KTRLVGPNCPGIITPDECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLSQAGVGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T +++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLQAFNEDPETYAVIMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI M E GI +A +P+ +G +L+ +L Sbjct: 232 GFIGGRTAPPGKRMGHAGAIISGGKGTADEKIRIMNECGIKVAETPSVMGETLISVL 288 >gi|251792226|ref|YP_003006947.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Aggregatibacter aphrophilus NJ8700] gi|247533614|gb|ACS96860.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Aggregatibacter aphrophilus NJ8700] Length = 292 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NTKV+ QG TG GTFH++QA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDNNTKVICQGFTGGQGTFHSQQALAY-GTKLVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A A A+VIYVP G DAI+E+I+A I LIVCITEGIP LDM+ VK RL ++ Sbjct: 56 TVRDAVRAIGATATVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMLVVKQRLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPEECKIGIMPGDIHKKGKIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ F+D+L+LF D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFVDILKLFQEDPQTEAIVMIGEIGGSAEEEAAVFIKQHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S A+IG +L E L Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFVALEAAGVKTVRSLAQIGAALREAL 288 >gi|322787000|gb|EFZ13224.1| hypothetical protein SINV_06825 [Solenopsis invicta] Length = 322 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 179/300 (59%), Positives = 230/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +D NTKV+ QG TGK GTFH +QA+ Y T++VGG+ PKK T G PV+ + Sbjct: 24 NLKIDANTKVICQGFTGKQGTFHCQQALDY-GTKIVGGVSPKKAGTEHLGK----PVYKS 78 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE T A A+VIYVPP A AI+E+I+AE+PLIVCITEGIP DMV+VK RL E++ Sbjct: 79 VKEAKEATGATATVIYVPPPAAASAIMEAIDAEMPLIVCITEGIPQHDMVKVKRRLLEQN 138 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 139 KSRLIGPNCPGIIAPEQCKIGIMPGHIHQRGKIGIVSRSGTLTYEAVNQTTLAGLGQTLC 198 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID L++FL D I+M+GEIGGSAEE AA++L ++ G+ KP+V Sbjct: 199 VGIGGDPFNGTDFIDCLDVFLTDPDCGGIIMIGEIGGSAEEFAAEYLIEKNTGGKAKPVV 258 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPGR MGHAGA+ISGGKGGA+DKINA+++AG+ + SPA++G L++ + L Sbjct: 259 SFIAGLTAPPGRRMGHAGAIISGGKGGAQDKINALEKAGVIVTRSPAQMGNELLKEMTRL 318 >gi|22126940|ref|NP_670363.1| succinyl-CoA synthetase subunit alpha [Yersinia pestis KIM 10] gi|45440874|ref|NP_992413.1| succinyl-CoA synthetase subunit alpha [Yersinia pestis biovar Microtus str. 91001] gi|51595494|ref|YP_069685.1| succinyl-CoA synthetase subunit alpha [Yersinia pseudotuberculosis IP 32953] gi|108806591|ref|YP_650507.1| succinyl-CoA synthetase subunit alpha [Yersinia pestis Antiqua] gi|108813042|ref|YP_648809.1| succinyl-CoA synthetase subunit alpha [Yersinia pestis Nepal516] gi|145599846|ref|YP_001163922.1| succinyl-CoA synthetase subunit alpha [Yersinia pestis Pestoides F] gi|149366884|ref|ZP_01888918.1| succinyl-CoA synthetase alpha chain [Yersinia pestis CA88-4125] gi|153950506|ref|YP_001401841.1| succinyl-CoA synthetase subunit alpha [Yersinia pseudotuberculosis IP 31758] gi|162420505|ref|YP_001605913.1| succinyl-CoA synthetase subunit alpha [Yersinia pestis Angola] gi|165924347|ref|ZP_02220179.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165938400|ref|ZP_02226958.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166011613|ref|ZP_02232511.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166211799|ref|ZP_02237834.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167399740|ref|ZP_02305258.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419457|ref|ZP_02311210.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423865|ref|ZP_02315618.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468937|ref|ZP_02333641.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis FV-1] gi|170025187|ref|YP_001721692.1| succinyl-CoA synthetase subunit alpha [Yersinia pseudotuberculosis YPIII] gi|186894547|ref|YP_001871659.1| succinyl-CoA synthetase subunit alpha [Yersinia pseudotuberculosis PB1/+] gi|218928284|ref|YP_002346159.1| succinyl-CoA synthetase subunit alpha [Yersinia pestis CO92] gi|229841052|ref|ZP_04461211.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843156|ref|ZP_04463302.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229893993|ref|ZP_04509179.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Yersinia pestis Pestoides A] gi|229903483|ref|ZP_04518596.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Yersinia pestis Nepal516] gi|270487264|ref|ZP_06204338.1| succinyl-CoA synthetase subunit alpha [Yersinia pestis KIM D27] gi|294503123|ref|YP_003567185.1| succinyl-CoA synthetase alpha subunit [Yersinia pestis Z176003] gi|21959980|gb|AAM86614.1|AE013907_8 succinyl-CoA synthetase, alpha subunit [Yersinia pestis KIM 10] gi|45435732|gb|AAS61290.1| succinyl-CoA synthetase alpha chain [Yersinia pestis biovar Microtus str. 91001] gi|51588776|emb|CAH20390.1| succinyl-CoA synthetase alpha chain [Yersinia pseudotuberculosis IP 32953] gi|108776690|gb|ABG19209.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Yersinia pestis Nepal516] gi|108778504|gb|ABG12562.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Yersinia pestis Antiqua] gi|115346895|emb|CAL19782.1| succinyl-CoA synthetase alpha chain [Yersinia pestis CO92] gi|145211542|gb|ABP40949.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Yersinia pestis Pestoides F] gi|149291258|gb|EDM41333.1| succinyl-CoA synthetase alpha chain [Yersinia pestis CA88-4125] gi|152962001|gb|ABS49462.1| succinyl-CoA synthetase, alpha subunit [Yersinia pseudotuberculosis IP 31758] gi|162353320|gb|ABX87268.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis Angola] gi|165913778|gb|EDR32397.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165923407|gb|EDR40539.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165989561|gb|EDR41862.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166207570|gb|EDR52050.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166962198|gb|EDR58219.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050448|gb|EDR61856.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056714|gb|EDR66477.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751721|gb|ACA69239.1| succinyl-CoA synthetase, alpha subunit [Yersinia pseudotuberculosis YPIII] gi|186697573|gb|ACC88202.1| succinyl-CoA synthetase, alpha subunit [Yersinia pseudotuberculosis PB1/+] gi|229679253|gb|EEO75356.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Yersinia pestis Nepal516] gi|229689503|gb|EEO81564.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229697418|gb|EEO87465.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229703878|gb|EEO90891.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Yersinia pestis Pestoides A] gi|262361159|gb|ACY57880.1| succinyl-CoA synthetase alpha subunit [Yersinia pestis D106004] gi|262365286|gb|ACY61843.1| succinyl-CoA synthetase alpha subunit [Yersinia pestis D182038] gi|270335768|gb|EFA46545.1| succinyl-CoA synthetase subunit alpha [Yersinia pestis KIM D27] gi|294353582|gb|ADE63923.1| succinyl-CoA synthetase alpha subunit [Yersinia pestis Z176003] gi|320014255|gb|ADV97826.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 290 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 177/297 (59%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTQHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK RLE+S Sbjct: 56 TVREAVETTGATASVIYVPAPFCKDSILEAIDAGIKLIICITEGIPTLDMLVVKVRLEQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQS+ Sbjct: 116 DARMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDIGFGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEVIVMIGEIGGNAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLAEIGNAVKAVL 288 >gi|54293530|ref|YP_125945.1| succinyl-CoA synthetase, alpha subunit [Legionella pneumophila str. Lens] gi|54296569|ref|YP_122938.1| succinyl-CoA synthetase, alpha subunit [Legionella pneumophila str. Paris] gi|148360809|ref|YP_001252016.1| succinyl CoA synthetase subnit alpha [Legionella pneumophila str. Corby] gi|296106127|ref|YP_003617827.1| succinyl-CoA synthetase alpha chain [Legionella pneumophila 2300/99 Alcoy] gi|53750354|emb|CAH11748.1| succinyl-CoA synthetase, alpha subunit [Legionella pneumophila str. Paris] gi|53753362|emb|CAH14812.1| succinyl-CoA synthetase, alpha subunit [Legionella pneumophila str. Lens] gi|148282582|gb|ABQ56670.1| succinyl CoA synthetase alpha chain [Legionella pneumophila str. Corby] gi|295648028|gb|ADG23875.1| succinyl-CoA synthetase alpha chain [Legionella pneumophila 2300/99 Alcoy] gi|307609342|emb|CBW98827.1| succinyl-CoA synthetase, alpha subunit [Legionella pneumophila 130b] Length = 291 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 179/299 (59%), Positives = 222/299 (74%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDK+TKVL QG TGK GT+HTEQA+ Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLVDKHTKVLCQGFTGKQGTYHTEQALAY-GTKMVGGVTPGKGGQMHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA E T A+ASVIYVP D+IIE+ EA + LIVCITEG+PVLDM++VK +E + Sbjct: 56 TMREAVEETQADASVIYVPAPFCKDSIIEAAEAGVKLIVCITEGVPVLDMLQVKVYIENN 115 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +RLIGPNCPGI+TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ +G GQST Sbjct: 116 TQARLIGPNCPGIITPGECKIGIMPGYIHLPGKVGIVSRSGTLTYEAVKQTTDKGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT FID L LF D TE+I+MVGEIGGSAEEEAA+F+K KKP+ Sbjct: 176 CIGIGGDPIPGTSFIDALSLFEKDPKTEAIIMVGEIGGSAEEEAAEFIKSHV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG TAP G+ MGHAGA+ISGGKG A +K A++ AG+ SPA +G ++ E+ G Sbjct: 232 VSYIAGVTAPAGKRMGHAGAIISGGKGTAAEKYAALEAAGVKTVRSPADLGDAIAEVTG 290 >gi|152979224|ref|YP_001344853.1| succinyl-CoA synthetase, alpha subunit [Actinobacillus succinogenes 130Z] gi|150840947|gb|ABR74918.1| succinyl-CoA synthetase, alpha subunit [Actinobacillus succinogenes 130Z] Length = 289 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 177/298 (59%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNTKV+ QG TG GTFH+EQA+ Y T++VGG P KG T G +PVF Sbjct: 1 MSILINKNTKVICQGFTGGQGTFHSEQALAY-GTKLVGGTSPGKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T A ASVIYVP DAI+E+I+A I LIVCITEGIP LDM++VK +L+++ Sbjct: 56 TVREAVQKTGATASVIYVPAPFCKDAILEAIDAGIRLIVCITEGIPTLDMLQVKEKLDET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TP+ CKIGIMP +I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPEECKIGIMPANIHKKGCVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FI++L+ F D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSSFIEILQRFEDDPETEAIVMIGEIGGSAEEEAADFIKHHI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++EAG+ S A IG +L +LG Sbjct: 232 SYIAGITAPKGKRMGHAGAIISGGKGTAAEKIKALQEAGVTTVQSLADIGSALRNILG 289 >gi|119945909|ref|YP_943589.1| succinyl-CoA synthetase, alpha subunit [Psychromonas ingrahamii 37] gi|119864513|gb|ABM03990.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Psychromonas ingrahamii 37] Length = 290 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 177/298 (59%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQALEY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A ASVIYVP DAI+E+I+A I LIV ITEGIP LD+V VK +L+++ Sbjct: 56 TVREAVEKTGATASVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTLDLVSVKVKLDQA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMPG I KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPGHIHLKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSSFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A+DK A+++AG+ S A+IG++L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTADDKFKALEDAGVKTTKSLAQIGQALREVTG 289 >gi|289209200|ref|YP_003461266.1| succinyl-CoA synthetase, subunit alpha [Thioalkalivibrio sp. K90mix] gi|288944831|gb|ADC72530.1| succinyl-CoA synthetase, alpha subunit [Thioalkalivibrio sp. K90mix] Length = 291 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 170/297 (57%), Positives = 223/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD++TKV+ QG TGK G+FH+EQAI Y T++VGG+ P KG +++ PVF Sbjct: 1 MSILVDRDTKVICQGFTGKQGSFHSEQAIAY-GTRLVGGVTPGKGGQT----HLDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A +T A S+IYVP A DAI E+ +A I L VCITEGIPV DM+RVK L S Sbjct: 56 TVADAVAQTGATVSMIYVPAPFAADAICEAADAGIELAVCITEGIPVQDMIRVKQVLAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S+RLIGPNCPGI+TPD+CK+GIMPG I ++G +GI+SRSGTLTYEAV QTS GLGQST Sbjct: 116 STRLIGPNCPGIITPDACKVGIMPGYIHQRGRIGIISRSGTLTYEAVKQTSDRGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP++G +F+D L LF D T+ +++VGEIGG AEE AA+++++E KP+ Sbjct: 176 IGIGGDPIQGLDFVDCLRLFRDDPETDGVLLVGEIGGDAEERAARYIENEF----DKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAPPGR MGHAGA+I+GG+G AE K+ A++ AG +A SPA +G+++ L Sbjct: 232 AYIAGATAPPGRRMGHAGAIIAGGQGTAEQKMAALRAAGASVAESPAELGQAMQSAL 288 >gi|209694428|ref|YP_002262356.1| succinyl-CoA synthetase subunit alpha [Aliivibrio salmonicida LFI1238] gi|208008379|emb|CAQ78534.1| succinyl-CoA synthetase alpha chain [Aliivibrio salmonicida LFI1238] Length = 290 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 177/298 (59%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIDY-GTKMVGGVSPGKGGQVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+A I LI+ ITEGIP LD++ VK RL+ Sbjct: 56 TVRDAVEATGATASVIYVPAPFCKDAILEAIDAGIKLIITITEGIPTLDLLDVKVRLDAE 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA+F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAEFIKHNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREITG 289 >gi|160872669|ref|ZP_02062801.1| succinyl-CoA synthetase, alpha subunit [Rickettsiella grylli] gi|159121468|gb|EDP46806.1| succinyl-CoA synthetase, alpha subunit [Rickettsiella grylli] Length = 289 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 179/298 (60%), Positives = 221/298 (74%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TGK GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGKQGTFHSEQAIAY-GTKMVGGVTPGKGGTQHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TVA+A +T A+ASVIYVP D+IIE+ +A I IVCITEGIPVLDM+ VK LE K Sbjct: 56 TVADAVAKTGADASVIYVPAPFCKDSIIEAADAGISFIVCITEGIPVLDMLDVKVYLETK 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +RL+GPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 NIARLVGPNCPGVITPGECKIGIMPGYIHQSGRVGIVSRSGTLTYEAVKQTTDLGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ G F+DVL LF D TE+I+MVGEIGG+AEEEAA F+K + KP+ Sbjct: 176 CVGIGGDPIPGMNFVDVLRLFQEDPQTEAILMVGEIGGNAEEEAAAFIKTKV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V ++AG TAP G+ MGHAGA+ISGGKG A +K A++ AG+ SP +G+ + +LL Sbjct: 232 VAYIAGVTAPVGKRMGHAGAIISGGKGTAAEKFKALEAAGVYTVKSPTDMGKRIAQLL 289 >gi|293392047|ref|ZP_06636381.1| succinyl-CoA ligase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952581|gb|EFE02700.1| succinyl-CoA ligase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 290 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ NTKV+ QG TG GTFH++QA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILINNNTKVICQGFTGGQGTFHSQQALAY-GTKLVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A A+VIYVP G DAI+E+I+A I LIVCITEGIP LDM+ VK RL ++ Sbjct: 56 TVRDAVEATGATATVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMLVVKQRLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPEECKIGIMPGDIHKKGKIGIISRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ F+D+L+LF D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFVDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAFIKQHI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP + MGHAGA+ISGGKG A++K A + AG+ S A IG +L E+L Sbjct: 232 SYIAGVTAPKDKRMGHAGAIISGGKGTADEKFAAFEAAGVKTVRSLADIGAALREVL 288 >gi|254994742|ref|ZP_05276932.1| succinyl-CoA ligase chain A (sucD) [Anaplasma marginale str. Mississippi] Length = 294 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 186/298 (62%), Positives = 230/298 (77%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNT+V+ QG TG GTFH+EQA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLVDKNTRVICQGFTGSNGTFHSEQAVAY-GTKMVGGVTPGKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +AK T ANASVIYVP A DAI E+IEAEI LIVCITEGIPVLDMV+VK L S Sbjct: 56 TVLQAKVETQANASVIYVPAPYAADAIFEAIEAEIELIVCITEGIPVLDMVQVKRALAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR+IGPNCPGI+TP+ CKIGIMPG I +KG++G++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRMIGPNCPGIITPEECKIGIMPGYIHKKGNIGVVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+D ++LFL DE T IV++GEIGGS EEEA +FL+ G KKP+V Sbjct: 176 IGIGGDPVHGMSFLDCVQLFLEDEDTHGIVIIGEIGGSEEEEAVEFLQSS---GTKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GFVAG+TAPPG+ MGHAGA+ SG G A+ KI MK AG+ +A +PA IG+++++++G Sbjct: 233 GFVAGQTAPPGKRMGHAGAISSGSSGTAKGKIEFMKRAGVAVAETPAVIGKTVLDVMG 290 >gi|90406990|ref|ZP_01215180.1| succinyl-CoA synthetase alpha subunit [Psychromonas sp. CNPT3] gi|90311861|gb|EAS39956.1| succinyl-CoA synthetase alpha subunit [Psychromonas sp. CNPT3] Length = 301 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 177/298 (59%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAIDY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A A+VIYVP DAI+E+I+A I LIV ITEG+P LDM+ VK +L+++ Sbjct: 56 TVREAIDATGATATVIYVPAPFCKDAILEAIDAGISLIVTITEGMPTLDMLEVKVKLDQA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G FID+L LF AD TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGASFIDILALFEADPETEAIVMIGEIGGTAEEEAAAFIKQHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG AEDK A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFRALEDAGVKTTKSLAEIGKALREVTG 289 >gi|313238969|emb|CBY13957.1| unnamed protein product [Oikopleura dioica] Length = 330 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 168/288 (58%), Positives = 218/288 (75%), Gaps = 7/288 (2%) Query: 10 KVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT 69 +V+VQG TGK GT+H+EQAI Y T VVGG+ P KG G VPVF +VA+A++ T Sbjct: 41 QVIVQGFTGKQGTYHSEQAIAY-GTHVVGGVTPGKGGQEHLG----VPVFNSVADARKGT 95 Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSRLIGPN 128 A+A+VIYVPP A +AI+++IEAE+PL VCITEGIP DMVRVK+ L ++ +RLIGPN Sbjct: 96 GADATVIYVPPKFAANAILDAIEAEVPLAVCITEGIPAQDMVRVKSALIQQDKTRLIGPN 155 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 CPGI++P+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT++ G GQ+ +GIGGDP Sbjct: 156 CPGIISPEQCKIGIMPGHIHQRGKIGIVSRSGTLTYEAVHQTTETGFGQTLCIGIGGDPF 215 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKPIVGFVAGKT 247 GT FID LE+FL D T+ I+M+GEIGG AEE+AA++L++ + KP+V F+AG T Sbjct: 216 NGTNFIDCLEVFLNDPDTKGIMMIGEIGGDAEEQAAEYLREHNFSQANPKPVVAFIAGST 275 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 APPGR MGHAGA+ISGGKG AE K A+ + G+ SPA++GR +V Sbjct: 276 APPGRRMGHAGAIISGGKGTAEAKFAALDDVGVVTTNSPAQMGRCMVR 323 >gi|238898947|ref|YP_002924629.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466707|gb|ACQ68481.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 290 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 177/297 (59%), Positives = 221/297 (74%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNTKV+ QG TG GTFH+E AI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILVDKNTKVICQGFTGSQGTFHSEHAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A ASVIYVP D+I+E+I+A I LIVCITEGIP LDM+ VK +L++S Sbjct: 56 TVKEAVLKTGATASVIYVPAPFCKDSILEAIDAGITLIVCITEGIPTLDMLIVKEKLKQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPGI+TP +CKIGIMPG I R G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 HVRMIGPNCPGIITPGACKIGIMPGHIHRPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L LF D TE+IVM+GEIGG+AEEE A ++K+ + KK +V Sbjct: 176 VGIGGDPISGSHFIDILTLFEQDPQTEAIVMIGEIGGNAEEETADYIKNTS---FKKLVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGG+G AE+K A++ AG+ S IG++++ +L Sbjct: 233 AYIAGVTAPKGKRMGHAGAIISGGRGTAEEKFLALEAAGVKTVHSLTDIGQTVINIL 289 >gi|328775991|ref|XP_623800.2| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Apis mellifera] Length = 340 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 183/307 (59%), Positives = 232/307 (75%), Gaps = 13/307 (4%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +D NTKV+ QG TGK GTFH +QAI Y T++VGG++PKK T G PVF Sbjct: 34 NLKIDSNTKVICQGFTGKQGTFHCQQAIEY-GTKIVGGVNPKKAGTQHLGK----PVFKN 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE T A ASVIYVPP A AI+E+I+AE+PLIVCITEGIP DMV+VK RL E++ Sbjct: 89 VKEAKEATGATASVIYVPPPSAAAAIMEAIDAEMPLIVCITEGIPQHDMVKVKRRLLEQN 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 149 KSRLVGPNCPGIIAPEQCKIGIMPGHIHQKGKIGIVSRSGTLTYEAVNQTTLAGLGQTLC 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE------AKRG 234 +GIGGDP GT FID L++FL D + I+M+GEIGGSAEE AA++L + +K G Sbjct: 209 IGIGGDPFNGTNFIDCLDVFLRDPECDGIIMIGEIGGSAEESAAEYLIEHNTVGCSSKLG 268 Query: 235 RK-KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 K KP+V F+AG TAPPGR MGHAGA+ISGGKGGA+DKINA+++AG+ ++ SPA++G L Sbjct: 269 NKTKPVVSFIAGITAPPGRRMGHAGAIISGGKGGAQDKINALEKAGVIVSRSPAQMGNEL 328 Query: 294 VELLGSL 300 ++ + L Sbjct: 329 LKEMTRL 335 >gi|253990445|ref|YP_003041801.1| succinyl-CoA synthetase subunit alpha [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638988|emb|CAR67603.1| succinyl-coa synthetase, alpha subunit (ec 6.2.1.4) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781895|emb|CAQ85059.1| succinyl-CoA synthetase, alpha subunit [Photorhabdus asymbiotica] Length = 291 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 176/297 (59%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLAVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHQAGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K + KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGTAEEEAAAYIKQQV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +LL Sbjct: 232 AYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKDLL 288 >gi|290474108|ref|YP_003466985.1| succinyl-CoA synthetase subunit alpha [Xenorhabdus bovienii SS-2004] gi|289173418|emb|CBJ80195.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Xenorhabdus bovienii SS-2004] Length = 291 Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 176/297 (59%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDQA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD+CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPDACKIGIMPGHIHKAGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ LL Sbjct: 232 AYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKVLL 288 >gi|308802363|ref|XP_003078495.1| putative succinyl-CoA ligase alpha subunit (ISS) [Ostreococcus tauri] gi|116056947|emb|CAL53236.1| putative succinyl-CoA ligase alpha subunit (ISS) [Ostreococcus tauri] Length = 331 Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 183/297 (61%), Positives = 227/297 (76%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VD NT+V+VQG TGK GTFH+EQAI Y T+VVGG+ PKKG T G +PVF T Sbjct: 37 AVFVDGNTRVIVQGFTGKNGTFHSEQAIAY-GTKVVGGVTPKKGGTTHLG----LPVFDT 91 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 V EA T ANASVIYVPP A AI+E++EAEI L+VCITEG+P DMVRVK A + +S Sbjct: 92 VREAVVETKANASVIYVPPPFAAKAIMEAVEAEIDLVVCITEGVPQHDMVRVKRALMSQS 151 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +G++SRSGTLTYEAV+QT+ GLGQST Sbjct: 152 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGVVSRSGTLTYEAVYQTTVTGLGQSTC 211 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE I+M+GEIGG+AEEEAA+F++ G KPIV Sbjct: 212 VGIGGDPFNGTNFVDCLEKFVKDPQTEGIIMIGEIGGTAEEEAAEFIRAS---GTDKPIV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKGGA DKI A++ AG+ + SPA++G+++ ++ Sbjct: 269 SFIAGLTAPPGRRMGHAGAIISGGKGGASDKIAALEAAGVRVVKSPAKMGQAMYDMF 325 >gi|158319673|ref|YP_001512180.1| succinyl-CoA synthetase subunit alpha [Alkaliphilus oremlandii OhILAs] gi|158139872|gb|ABW18184.1| succinyl-CoA synthetase, alpha subunit [Alkaliphilus oremlandii OhILAs] Length = 300 Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 169/298 (56%), Positives = 226/298 (75%), Gaps = 11/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHP-KKGSTYWTGGNVNVPVF 59 MSI ++K+T+V+VQG+TGK +HT+Q I Y T++V G+ P K+GST NVPVF Sbjct: 1 MSIWINKDTRVIVQGITGKTALYHTKQMIEY-GTKIVAGVTPGKEGSTI-----ENVPVF 54 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV +A T AN SVIYVP A DAI+E+++AE+ +++CITE IP+ DM+ VK LE Sbjct: 55 DTVQKAVRETGANVSVIYVPAKSAADAILEAVDAELEMVICITEHIPIKDMIFVKKHLEG 114 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RLIGPNCPGI+TP+ CKIGIMPG I +KG +G++SRSGTLTYEAV Q S+ G+GQST Sbjct: 115 KKTRLIGPNCPGIITPEECKIGIMPGYIHKKGRIGVVSRSGTLTYEAVHQLSERGIGQST 174 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPV GT+FIDVL F D T++++M+GEIGG+AEE+AA ++K+ KKP+ Sbjct: 175 AVGIGGDPVNGTDFIDVLMEFNEDSETDAVIMIGEIGGNAEEKAALWIKENM----KKPV 230 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF++GKTAP G+ MGHAGA+IS GKG A++KI M+ GI +A +P IG ++V++L Sbjct: 231 VGFISGKTAPAGKRMGHAGAIISEGKGTADEKIRVMESCGIHMAQNPTDIGATMVKVL 288 >gi|21356559|ref|NP_650809.1| CG6255 [Drosophila melanogaster] gi|7300518|gb|AAF55672.1| CG6255 [Drosophila melanogaster] gi|19528263|gb|AAL90246.1| GH18334p [Drosophila melanogaster] gi|116811194|emb|CAL25819.1| CG6255 [Drosophila melanogaster] gi|116811198|emb|CAL25821.1| CG6255 [Drosophila melanogaster] gi|116811200|emb|CAL25822.1| CG6255 [Drosophila melanogaster] gi|116811204|emb|CAL25824.1| CG6255 [Drosophila melanogaster] gi|116811206|emb|CAL25825.1| CG6255 [Drosophila melanogaster] gi|116811208|emb|CAL25826.1| CG6255 [Drosophila melanogaster] gi|116811210|emb|CAL25827.1| CG6255 [Drosophila melanogaster] gi|116811212|emb|CAL25828.1| CG6255 [Drosophila melanogaster] gi|116811214|emb|CAL25829.1| CG6255 [Drosophila melanogaster] gi|220944184|gb|ACL84635.1| CG6255-PA [synthetic construct] gi|223966445|emb|CAR92959.1| CG6255-PA [Drosophila melanogaster] gi|223966455|emb|CAR92964.1| CG6255-PA [Drosophila melanogaster] gi|223966457|emb|CAR92965.1| CG6255-PA [Drosophila melanogaster] gi|223966459|emb|CAR92966.1| CG6255-PA [Drosophila melanogaster] gi|223966463|emb|CAR92968.1| CG6255-PA [Drosophila melanogaster] Length = 342 Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 169/295 (57%), Positives = 223/295 (75%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K TKVLVQG TGK TFH+E++I Y T +VGG++PKKG T G PVF + Sbjct: 32 NLKINKATKVLVQGFTGKQATFHSEESIKY-GTNIVGGVNPKKGGTEHLGK----PVFKS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA E+ +A+VI++PP A + I +IE+EI LIV ITEGIP DMVR+ L + Sbjct: 87 VAEAVEKAKPDATVIFIPPPSAAEGICAAIESEIGLIVAITEGIPQADMVRISQMLNCQE 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++PD CKIGIMPG I ++G VGI+SRSGTLTYE+V QT+ GLGQ+ Sbjct: 147 KSRLLGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP GT FID L++FL+D+ + IVM+GEIGGSAEEEAA FLK++ KP+V Sbjct: 207 VGLGGDPFNGTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEEAADFLKEKNTGCEAKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+AG+TAPPGR MGHAGA+ISGGKG A+DK+ A+++AG+ + +P +G +L+E Sbjct: 267 GFIAGQTAPPGRRMGHAGAIISGGKGAAKDKVAALEKAGVRMTANPCHLGSTLLE 321 >gi|258597229|ref|XP_001347772.2| succinyl-CoA synthetase alpha subunit, putative [Plasmodium falciparum 3D7] gi|254832608|gb|AAN35685.2| succinyl-CoA synthetase alpha subunit, putative [Plasmodium falciparum 3D7] Length = 327 Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 171/305 (56%), Positives = 223/305 (73%), Gaps = 9/305 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--GNVNVPVFT 60 + +DKNT V+ QG+TGK GTFHT +A+ Y T++VGG++P+K T WT +PVF Sbjct: 24 VFIDKNTTVICQGITGKQGTFHTTEALKY-GTKMVGGVNPRKKGTTWTSYDNKYTLPVFG 82 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EAKE T ASV+YVPP A A+IESIEAEIPLIVCITEGI DM+ VK+ L+ S Sbjct: 83 TILEAKENTNCYASVLYVPPEHAKSAMIESIEAEIPLIVCITEGICQHDMLEVKSCLKMS 142 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + LIGPNCPGI+ P CKIGIMP I +KG VGI+SRSGTLTYE V QT++ GLGQST Sbjct: 143 KKTTLIGPNCPGIIKPGECKIGIMPSHIHKKGCVGIVSRSGTLTYEGVNQTTKVGLGQST 202 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL----KDEAKRGR 235 +GIGGDP GT F+D ++LFL D+ TE I+++GEIGG +EE+ AQ+L D KR + Sbjct: 203 CIGIGGDPFHGTNFLDCIKLFLEDDQTECILLIGEIGGDSEEQVAQWLIQNNVDNGKR-K 261 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+ F+AGK APPG+ MGHAGA+ISGGKG A+ KI A++ AG+ + +P ++G + Sbjct: 262 KKPVFAFIAGKCAPPGKRMGHAGALISGGKGTADGKIEALQNAGVHVILNPTKMGEDIYA 321 Query: 296 LLGSL 300 ++ +L Sbjct: 322 VMQTL 326 >gi|308050194|ref|YP_003913760.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ferrimonas balearica DSM 9799] gi|307632384|gb|ADN76686.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ferrimonas balearica DSM 9799] Length = 290 Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 176/298 (59%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGSTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP DAI+E+I+A I LIV ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTLDMLDVKVKLDQA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHQPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGTAEEEAAAYIKQHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+I+GGKG A DK A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIIAGGKGTAADKFAALEDAGVKTVRSLADIGKALREVTG 289 >gi|116811192|emb|CAL25818.1| CG6255 [Drosophila melanogaster] gi|116811196|emb|CAL25820.1| CG6255 [Drosophila melanogaster] gi|116811202|emb|CAL25823.1| CG6255 [Drosophila melanogaster] gi|223966447|emb|CAR92960.1| CG6255-PA [Drosophila melanogaster] gi|223966449|emb|CAR92961.1| CG6255-PA [Drosophila melanogaster] gi|223966451|emb|CAR92962.1| CG6255-PA [Drosophila melanogaster] gi|223966453|emb|CAR92963.1| CG6255-PA [Drosophila melanogaster] gi|223966461|emb|CAR92967.1| CG6255-PA [Drosophila melanogaster] gi|223966465|emb|CAR92969.1| CG6255-PA [Drosophila melanogaster] gi|223966467|emb|CAR92970.1| CG6255-PA [Drosophila melanogaster] Length = 342 Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 169/295 (57%), Positives = 223/295 (75%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K TKVLVQG TGK TFH+E++I Y T +VGG++PKKG T G PVF + Sbjct: 32 NLKINKATKVLVQGFTGKQATFHSEESIKY-GTNIVGGVNPKKGGTEHLGK----PVFKS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA E+ +A+VI++PP A + I +IE+EI LIV ITEGIP DMVR+ L + Sbjct: 87 VAEAVEKAKPDATVIFIPPPSAAEGICAAIESEIGLIVAITEGIPQADMVRISQMLNCQE 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++PD CKIGIMPG I ++G VGI+SRSGTLTYE+V QT+ GLGQ+ Sbjct: 147 KSRLLGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP GT FID L++FL+D+ + IVM+GEIGGSAEEEAA FLK++ KP+V Sbjct: 207 VGLGGDPFNGTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEEAADFLKEKNTGCEAKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+AG+TAPPGR MGHAGA+ISGGKG A+DK+ A+++AG+ + +P +G +L+E Sbjct: 267 GFIAGQTAPPGRRMGHAGAIISGGKGAAKDKVAALEKAGVRMTANPCHLGSTLLE 321 >gi|123443155|ref|YP_001007129.1| succinyl-CoA synthetase subunit alpha [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332160921|ref|YP_004297498.1| succinyl-CoA synthetase subunit alpha [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122090116|emb|CAL12979.1| succinyl-CoA synthetase alpha chain [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318604826|emb|CBY26324.1| succinyl-CoA ligase [ADP-forming] alpha chain [Yersinia enterocolitica subsp. palearctica Y11] gi|325665151|gb|ADZ41795.1| succinyl-CoA synthetase subunit alpha [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862914|emb|CBX73049.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Yersinia enterocolitica W22703] Length = 292 Score = 338 bits (868), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 176/293 (60%), Positives = 218/293 (74%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTQHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +LE+S Sbjct: 56 TVREAVETTGATASVIYVPAPFCKDSILEAIDAGIKLIICITEGIPTLDMLVVKVKLEQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 DARMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDIGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEVIVMIGEIGGNAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLAEIGNAV 284 >gi|297620666|ref|YP_003708803.1| Succinyl-CoA synthetase, alpha subunit [Waddlia chondrophila WSU 86-1044] gi|297375967|gb|ADI37797.1| Succinyl-CoA synthetase, alpha subunit [Waddlia chondrophila WSU 86-1044] Length = 297 Score = 338 bits (868), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 171/295 (57%), Positives = 226/295 (76%), Gaps = 10/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+K TKV+ QG+TG AG+FHTEQ + Y +Q VGG+ P KG G +PVF Sbjct: 1 MAILVNKKTKVMTQGITGNAGSFHTEQCLEY-GSQFVGGVTPWKGGQTCLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK+ T +A++I+VPP A +AI+E+ +A IPLIVCITEGIPV DM+ V +++S Sbjct: 56 TVKEAKKATGCDATMIFVPPPFAAEAILEAEDAGIPLIVCITEGIPVRDMLEVSQVMKRS 115 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SRLIGPNCPG++TP CKIGIMPG I ++G VGI+SRSGTLTYEAV+QT+Q LGQS+ Sbjct: 116 KKSRLIGPNCPGVITPGECKIGIMPGYIHQRGRVGIVSRSGTLTYEAVWQTTQLELGQSS 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT FIDVLELF D TE I+++GEIGG AEE+AA+++++ KP+ Sbjct: 176 CVGIGGDPLNGTNFIDVLELFENDPETEGILLIGEIGGDAEEQAAEWIRERC----SKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 FVAG+TAPPGR MGHAGA+ISG +G A++KI A+K AG+ +A +PA +G++++ Sbjct: 232 AAFVAGQTAPPGRRMGHAGAIISGNQGTAQNKIEALKHAGVTVAETPADLGKAML 286 >gi|170726193|ref|YP_001760219.1| succinyl-CoA synthetase subunit alpha [Shewanella woodyi ATCC 51908] gi|169811540|gb|ACA86124.1| succinyl-CoA synthetase, alpha subunit [Shewanella woodyi ATCC 51908] Length = 290 Score = 338 bits (868), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 175/293 (59%), Positives = 218/293 (74%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG ++N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIDY-GTQMVGGVSPGKGGQV----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP DAI E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVAETGATASVIYVPAPFCKDAIFEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPLTEAIVMIGEIGGTAEEEAADYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKAL 284 >gi|156934779|ref|YP_001438695.1| succinyl-CoA synthetase subunit alpha [Cronobacter sakazakii ATCC BAA-894] gi|156533033|gb|ABU77859.1| hypothetical protein ESA_02619 [Cronobacter sakazakii ATCC BAA-894] Length = 289 Score = 338 bits (868), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 177/297 (59%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHQPGRVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDALKTIL 288 >gi|195497961|ref|XP_002096322.1| GE25125 [Drosophila yakuba] gi|194182423|gb|EDW96034.1| GE25125 [Drosophila yakuba] Length = 342 Score = 338 bits (867), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 167/295 (56%), Positives = 223/295 (75%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K TKVLVQG TGK TFH+E++I Y T +VGG++PKKG T G PVF + Sbjct: 32 NLKINKQTKVLVQGFTGKQATFHSEESIKY-GTNIVGGVNPKKGGTEHLGK----PVFKS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA E+ +A+VI++PP A + I +IE+EI LIV ITEGIP DMVR+ L + Sbjct: 87 VAEAAEKVKPDATVIFIPPPSAAEGICSAIESEIGLIVAITEGIPQADMVRISQMLNCQE 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++P+ CKIGIMPG I ++G VGI+SRSGTLTYE+V QT+ GLGQ+ Sbjct: 147 KSRLLGPNCPGIISPEQCKIGIMPGHIHKRGMVGIVSRSGTLTYESVHQTTNVGLGQALC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDP GT F+D L++FL+D+ + IVM+GEIGGSAEEEAA FLK++ KP+V Sbjct: 207 IGLGGDPFNGTSFVDALKVFLSDKEIKGIVMIGEIGGSAEEEAADFLKEKNTGCEAKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+AG+TAPPGR MGHAGA+ISGGKG A+DK+ A+++AG+ + +P +G SL+E Sbjct: 267 GFIAGQTAPPGRRMGHAGAIISGGKGAAKDKVAALEKAGVRMTVNPCHLGSSLLE 321 >gi|227327548|ref|ZP_03831572.1| succinyl-CoA synthetase subunit alpha [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 290 Score = 338 bits (867), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKNTKVICQGFTGSQGTFHSEQALAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLTVKVKLDQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQS+ Sbjct: 116 GARMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKAIL 288 >gi|50120303|ref|YP_049470.1| succinyl-CoA synthetase subunit alpha [Pectobacterium atrosepticum SCRI1043] gi|49610829|emb|CAG74274.1| succinyl-CoA synthetase alpha chain [Pectobacterium atrosepticum SCRI1043] Length = 290 Score = 338 bits (867), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKNTKVICQGFTGSQGTFHSEQALAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLTVKVKLDQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQS+ Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA+++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAEYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKAIL 288 >gi|212635733|ref|YP_002312258.1| succinyl-CoA ligase subunit alpha [Shewanella piezotolerans WP3] gi|212557217|gb|ACJ29671.1| Succinyl-CoA ligase, alpha subunit [Shewanella piezotolerans WP3] Length = 290 Score = 338 bits (867), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 174/293 (59%), Positives = 219/293 (74%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A A+VIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVAETGATATVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 NVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAEYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKAL 284 >gi|119503181|ref|ZP_01625265.1| Succinyl-CoA synthetase, alpha subunit [marine gamma proteobacterium HTCC2080] gi|119460827|gb|EAW41918.1| Succinyl-CoA synthetase, alpha subunit [marine gamma proteobacterium HTCC2080] Length = 290 Score = 338 bits (867), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+NTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG ++++PVF Sbjct: 1 MSILIDQNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGQT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T A+ASVIYVP + D+I+E+ A I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVDEAVDQTGADASVIYVPAAFCKDSILEAANAGIQLIVCITEGIPTLDMLECKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP +CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGACKIGIMPGHIHLPGRVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L LF AD +TE+IVM+GEIGG+AEEEAA F+KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILTLFEADPSTEAIVMIGEIGGTAEEEAAAFIKDNV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG ++ +L G Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEDAGVRTVRSLADIGAAMADLTG 289 >gi|332306152|ref|YP_004434003.1| succinyl-CoA synthetase, alpha subunit [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173481|gb|AEE22735.1| succinyl-CoA synthetase, alpha subunit [Glaciecola agarilytica 4H-3-7+YE-5] Length = 290 Score = 338 bits (867), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 176/298 (59%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGGQGTFHSEQAIEY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+ +A I LIVCITEGIP LDM+ VK + + Sbjct: 56 TVREAVEETGATATVIYVPAPFCKDSIVEAADAGIELIVCITEGIPTLDMLYVKEYVNRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILQMFQDDPKTEAIVMIGEIGGTAEEEAAAFIKANI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A+DK A+++AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADDKFKALEDAGVKTVRSLAEIGQGLREITG 289 >gi|113461099|ref|YP_719167.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Haemophilus somnus 129PT] gi|112823142|gb|ABI25231.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Haemophilus somnus 129PT] Length = 290 Score = 338 bits (866), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++KNTKV+ QG TGK GTFH EQA+ Y TQ+VGG+ P K + G +PVF Sbjct: 1 MAILINKNTKVICQGFTGKQGTFHCEQALAY-GTQLVGGVSPGKSGSLHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV E E+T A A++IYVP DAI+E+I+ I IVCITEGIP LDM+ VK +L++S Sbjct: 56 TVREVVEKTGATATMIYVPAPFCKDAILEAIDGGIKFIVCITEGIPTLDMLEVKKKLQQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TP+ CK+GIMPG+I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 DVVMIGPNCPGVITPEECKMGIMPGNIHKKGRIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF AD T++IVM+GEIGGSAEEEAA F+ KP+V Sbjct: 176 VGIGGDPIPGSSFIDILKLFQADPETDAIVMIGEIGGSAEEEAADFIHKHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG AE+KI A+++AG+ S A IG+ L LL Sbjct: 232 AYIAGVTAPKGKRMGHAGAIISGGKGTAEEKIVALEKAGVKTVRSLADIGKVLRTLL 288 >gi|23098999|ref|NP_692465.1| succinyl-CoA synthetase subunit alpha [Oceanobacillus iheyensis HTE831] gi|22777227|dbj|BAC13500.1| succinyl-CoA synthetase alpha subunit [Oceanobacillus iheyensis HTE831] Length = 300 Score = 338 bits (866), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 167/297 (56%), Positives = 223/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+TKV+VQG+TG FHT+Q + Y T++V G+ PKKG T G VPV+ Sbjct: 1 MSVYINKDTKVIVQGITGGTARFHTKQMLEY-GTKIVAGVTPKKGGTEVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A ASVIYVP A DAI+E+ +AE+ L++CITE IPV+DMV+VK +E Sbjct: 56 TVKDAVDATGATASVIYVPAPFAADAILEATDAELDLVICITEHIPVMDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D KIGIMPG I +KG +G++SRSGTLTYEAV Q S+ G GQ+TA Sbjct: 116 KTRLVGPNCPGVITADETKIGIMPGYIHKKGHIGVVSRSGTLTYEAVHQLSEAGYGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D TE+++M+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLDAFNQDPETEAVIMIGEIGGTAEEEAAEWV----KANMNKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G TAPPG+ MGHAGA+ISGGKG A++KI M+ AGI +A +PA +G ++++ L Sbjct: 232 GFIGGATAPPGKRMGHAGAIISGGKGTADEKIRTMEAAGIKVADTPAVMGETMIKAL 288 >gi|157961615|ref|YP_001501649.1| succinyl-CoA synthetase subunit alpha [Shewanella pealeana ATCC 700345] gi|157846615|gb|ABV87114.1| succinyl-CoA synthetase, alpha subunit [Shewanella pealeana ATCC 700345] Length = 290 Score = 338 bits (866), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 175/293 (59%), Positives = 219/293 (74%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVSPGKGGQIHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVEVTGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPLTEAIVMIGEIGGTAEEEAAEYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKAL 284 >gi|242238593|ref|YP_002986774.1| succinyl-CoA synthetase subunit alpha [Dickeya dadantii Ech703] gi|242130650|gb|ACS84952.1| succinyl-CoA synthetase, alpha subunit [Dickeya dadantii Ech703] Length = 290 Score = 338 bits (866), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG G+FH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGSFHSEQALAY-GTQMVGGVTPGKGGTVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +LE++ Sbjct: 56 TVREAVEATGAIASVIYVPAPFCKDSILEAIDAGIQLIICITEGIPTLDMLTVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G+VGI+SRSGTLTYEAV QT+ GLGQS+ Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGNVGIVSRSGTLTYEAVKQTTDTGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGEAVKSVL 288 >gi|307545698|ref|YP_003898177.1| succinyl-CoA synthetase subunit alpha [Halomonas elongata DSM 2581] gi|307217722|emb|CBV42992.1| succinyl-CoA synthetase, subunit alpha [Halomonas elongata DSM 2581] Length = 290 Score = 338 bits (866), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 177/298 (59%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E T A ASVIYVP D+I+E+ A I LIVCITEGIP LDM+ VK + ++ Sbjct: 56 TVAEAVEATGAEASVIYVPAPFCKDSILEAANAGIKLIVCITEGIPTLDMLDVKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TPD CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQS+ Sbjct: 116 GARLIGPNCPGVITPDECKIGIMPGHIHKAGKVGIVSRSGTLTYEAVKQTTDHGFGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L F D ATE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILAEFEKDPATEAIVMIGEIGGTAEEEAAAYIKENV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L E G Sbjct: 232 AYIAGVTAPPGKRMGHAGAIIAGGKGTADEKFGALEAAGVKTVRSLAEIGDALKEAAG 289 >gi|58396343|ref|XP_321835.2| AGAP001312-PA [Anopheles gambiae str. PEST] gi|55234034|gb|EAA01194.2| AGAP001312-PA [Anopheles gambiae str. PEST] Length = 328 Score = 338 bits (866), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 175/300 (58%), Positives = 233/300 (77%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ N+KV+ QG TGK GTFH++QAI Y T++VGG+ P KG +++ PVF T Sbjct: 31 NLKLNSNSKVICQGFTGKQGTFHSQQAIEY-GTKLVGGVSPGKGGRT----HLDRPVFNT 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 VAEAK+ T A ASVIYVPP GA AI+E+IEAE+PLIVCITEG+P DMV+VK A L + Sbjct: 86 VAEAKKATGAEASVIYVPPPGAAKAIMEAIEAEMPLIVCITEGVPQHDMVKVKHALLAQD 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPDTKGIILIGEIGGVAEEKAADYLMQYNQGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA+DKINA+++AG+ + SPA++G+ L++ + L Sbjct: 266 SFIAGLSAPPGRRMGHAGAIISGGKGGAQDKINALEKAGVIVTRSPAQMGKELIKEMKRL 325 >gi|237746926|ref|ZP_04577406.1| succinyl-CoA synthetase subunit alpha [Oxalobacter formigenes HOxBLS] gi|229378277|gb|EEO28368.1| succinyl-CoA synthetase subunit alpha [Oxalobacter formigenes HOxBLS] Length = 292 Score = 338 bits (866), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 167/295 (56%), Positives = 225/295 (76%), Gaps = 10/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++KN++V+VQGLTGK G FHTE ++ Y + VGG+ PKKG T + +N+PV Sbjct: 1 MSILINKNSRVIVQGLTGKTGAFHTEMSMNYAFGKECYVGGVTPKKGGTTF----LNLPV 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV EAK++T AN SVIYVPP A AI E++EA I ++CITEGIPV DM+R + +++ Sbjct: 57 FNTVKEAKDQTGANVSVIYVPPPFAAAAIDEAVEAGIEFVICITEGIPVEDMLRTRYKMQ 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 ++ L+GPNCPGI+TPD KIGIMPG I +KGS+G++S+SGTLTYEA Q ++ GLGQS Sbjct: 117 GKNTILLGPNCPGIITPDELKIGIMPGHIHKKGSIGVVSKSGTLTYEAASQLAEFGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VG+GGDP+ G + IDVL++F D TE+++MVGEIGG+ EE AA ++K+ KKP Sbjct: 177 TVVGVGGDPINGLKHIDVLKMFNDDPETEAVIMVGEIGGNDEETAALWVKEN----MKKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 +VGF+AG TAPPG+ MGHAGA+ISGGKG A++K+ M+E GI + +PA IG++L Sbjct: 233 VVGFIAGVTAPPGKRMGHAGAIISGGKGTAQEKLAVMEECGITVTRNPAEIGKTL 287 >gi|91076012|ref|XP_966490.1| PREDICTED: similar to succinyl-CoA synthetase small subunit, putative isoform 1 [Tribolium castaneum] gi|91076014|ref|XP_975865.1| PREDICTED: similar to succinyl-CoA synthetase small subunit, putative isoform 2 [Tribolium castaneum] gi|270014681|gb|EFA11129.1| hypothetical protein TcasGA2_TC004730 [Tribolium castaneum] Length = 330 Score = 338 bits (866), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 178/301 (59%), Positives = 231/301 (76%), Gaps = 6/301 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++ + NTKV+ QG TGK GTFH++QAI Y T++VGG+ P KG ++++PVF Sbjct: 32 MNLKLTGNTKVICQGFTGKQGTFHSKQAIEY-GTKMVGGVSPGKGGKT----HLDLPVFN 86 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EK 119 +V EAK T A+ASVIYVPP GA AI+E+++AEIPLIVCITEGIP DMV+VK RL + Sbjct: 87 SVKEAKAATNADASVIYVPPPGAAAAILEAMDAEIPLIVCITEGIPQQDMVKVKHRLLRQ 146 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + SRL+GPNCPGI+ P+ CKIGIMPG I +KG VG++SRSGTLTYEAV QT+Q GLGQ+ Sbjct: 147 NKSRLVGPNCPGIIAPEQCKIGIMPGHIHQKGVVGVVSRSGTLTYEAVHQTTQVGLGQTL 206 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA++L KP+ Sbjct: 207 CVGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEQAAEYLMQHNTGPNAKPV 266 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V F+AG +APPGR MGHAGA+ISGGKGGA+DKINA+++AG + SPA++G L++ + Sbjct: 267 VSFIAGLSAPPGRRMGHAGAIISGGKGGAQDKINALEKAGAIVTKSPAQMGNELLKEMRR 326 Query: 300 L 300 L Sbjct: 327 L 327 >gi|120554085|ref|YP_958436.1| succinyl-CoA synthetase, alpha subunit [Marinobacter aquaeolei VT8] gi|120323934|gb|ABM18249.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Marinobacter aquaeolei VT8] Length = 290 Score = 337 bits (865), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGAQGTFHSEQAIAY-GTKMVGGVSPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A A+VIYVP DAIIE+ +A I LIVCITEGIP +DM+ K +++ Sbjct: 56 TVREAVEKTGAEATVIYVPAPFCKDAIIEAADAGIQLIVCITEGIPTIDMLYAKEYVDRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDFGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G+ FID+L+L D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 IGIGGDPIPGSNFIDILKLLQEDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLAEIGKALKEVTG 289 >gi|195353635|ref|XP_002043309.1| GM26905 [Drosophila sechellia] gi|194127423|gb|EDW49466.1| GM26905 [Drosophila sechellia] Length = 342 Score = 337 bits (865), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 167/295 (56%), Positives = 224/295 (75%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TK+LVQG TGK TFH+E++I Y T +VGG++PKKG T G PVF + Sbjct: 32 NLKINKSTKLLVQGFTGKQATFHSEESIKY-GTNIVGGVNPKKGGTEHLGK----PVFKS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA E+ +A+VI++PP A + I +IE+EI LIV ITEGIP DMVR+ L + Sbjct: 87 VAEAVEKAKPDATVIFIPPPSAAEGICAAIESEIGLIVAITEGIPQSDMVRISQMLNCQE 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++PD CKIGIMPG I ++G VGI+SRSGTLTYE+V QT+ GLGQ+ Sbjct: 147 KSRLLGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP GT FID L++FL+D+ + IVM+GEIGGSAEE+AA FLK++ KP+V Sbjct: 207 VGLGGDPFNGTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEDAADFLKEKNTGCEAKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+AG+TAPPGR MGHAGA+ISGGKG A+DK+ A+++AG+ + +P +G +L+E Sbjct: 267 GFIAGQTAPPGRRMGHAGAIISGGKGAAKDKVAALEKAGVRMTANPCHLGSTLLE 321 >gi|145220333|ref|YP_001131042.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Prosthecochloris vibrioformis DSM 265] gi|145206497|gb|ABP37540.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Chlorobium phaeovibrioides DSM 265] Length = 300 Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 170/303 (56%), Positives = 227/303 (74%), Gaps = 10/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T++ VQG+TG GTFHT Q IL T VV G+ P KG + G + + Sbjct: 1 MSVLVNKDTRLCVQGITGGEGTFHTSQ-ILEYGTNVVAGVTPGKGGVLYNGNDRDSFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV EA E+ AN +VI+VP + A DAI+E+ +A + +I+CITEGIPV DM++ A Sbjct: 60 VPVFNTVKEAVEKAEANTTVIFVPAAFAADAIMEAADAGLKVIICITEGIPVNDMMKAYA 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 ++ + L+GPNCPG++TP KIGIMPG I +KGS+G++SRSGTLTYEAV Q + GL Sbjct: 120 FVKSKGAVLVGPNCPGVITPGEAKIGIMPGFIHKKGSIGVVSRSGTLTYEAVHQLTHVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDPV GT F+D +++F D+ TE +VM+GEIGGSAEEEAA+++ K+ Sbjct: 180 GQSTCIGIGGDPVIGTRFLDAVKMFAKDDETEGLVMIGEIGGSAEEEAAEYI----KKHF 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG AE+KI AM+ AGI + SPA IG ++++ Sbjct: 236 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAEEKIKAMEAAGIHVVESPADIGEAMMK 295 Query: 296 LLG 298 LG Sbjct: 296 ALG 298 >gi|261822340|ref|YP_003260446.1| succinyl-CoA synthetase subunit alpha [Pectobacterium wasabiae WPP163] gi|261606353|gb|ACX88839.1| succinyl-CoA synthetase, alpha subunit [Pectobacterium wasabiae WPP163] Length = 290 Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKNTKVICQGFTGSQGTFHSEQALAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLTVKVKLDQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQS+ Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKAIL 288 >gi|116811216|emb|CAL25830.1| CG6255 [Drosophila simulans] Length = 342 Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 167/295 (56%), Positives = 224/295 (75%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TK+LVQG TGK TFH+E++I Y T +VGG++PKKG T G PVF + Sbjct: 32 NLKINKSTKLLVQGFTGKQATFHSEESIKY-GTNIVGGVNPKKGGTEHLGK----PVFKS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA E+ +A+VI++PP A + I +IE+EI LIV ITEGIP DMVR+ L + Sbjct: 87 VAEAVEKAKPDATVIFIPPPSAAEGICAAIESEIGLIVAITEGIPQSDMVRISQMLNCQE 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++PD CKIGIMPG I ++G VGI+SRSGTLTYE+V QT+ GLGQ+ Sbjct: 147 KSRLLGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP GT FID L++FL+D+ + IVM+GEIGGSAEE+AA FLK++ KP+V Sbjct: 207 VGLGGDPFNGTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEDAADFLKEKNTGCEAKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+AG+TAPPGR MGHAGA+ISGGKG A+DK+ A+++AG+ + +P +G +L+E Sbjct: 267 GFIAGQTAPPGRRMGHAGAIISGGKGAAKDKVAALEKAGVRMTANPCHLGSTLLE 321 >gi|91793534|ref|YP_563185.1| succinyl-CoA synthetase, alpha subunit [Shewanella denitrificans OS217] gi|91715536|gb|ABE55462.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella denitrificans OS217] Length = 290 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 174/293 (59%), Positives = 219/293 (74%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVSPGKGGQVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A A+VIYVP DAI+E+I+A I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVAETGATATVIYVPAPFCKDAILEAIDAGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGRVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPKTEAIVMIGEIGGNAEEEAAEYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKAL 284 >gi|253687633|ref|YP_003016823.1| succinyl-CoA synthetase, alpha subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754211|gb|ACT12287.1| succinyl-CoA synthetase, alpha subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 290 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKNTKVICQGFTGSQGTFHSEQALAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLTVKVKLDQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQS+ Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKAIL 288 >gi|194899962|ref|XP_001979526.1| GG15952 [Drosophila erecta] gi|190651229|gb|EDV48484.1| GG15952 [Drosophila erecta] Length = 342 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 167/295 (56%), Positives = 224/295 (75%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K TKVLVQG TGK TFH+E++I Y T +VGG++PKKG T G PVF + Sbjct: 32 NLKINKQTKVLVQGFTGKQATFHSEESIKY-GTNIVGGVNPKKGGTEHLGK----PVFKS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA E+ +A+VI++PP A + I +IE+EI LIV ITEGIP +DMVR+ L+ + Sbjct: 87 VAEAVEKAKPDATVIFIPPPSAAEGICSAIESEIGLIVAITEGIPQVDMVRILQMLKCQE 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++PD CKIGIMPG I ++G VGI+SRSGTLTYE+V QT+ GLGQ+ Sbjct: 147 KSRLLGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP GT FID L++FL+D+ + IVM+GEIGGSAEEEAA FLK++ KP+V Sbjct: 207 VGLGGDPFNGTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEEAADFLKEKNTGCEAKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+AG+TAPPGR MGHAGA+I+GGKG A+DK+ A+++ G+ + +P +G +L+E Sbjct: 267 GFIAGQTAPPGRRMGHAGAIIAGGKGAAKDKVAALEKVGVRMTANPCHLGSTLLE 321 >gi|260597127|ref|YP_003209698.1| succinyl-CoA synthetase subunit alpha [Cronobacter turicensis z3032] gi|260216304|emb|CBA29278.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Cronobacter turicensis z3032] Length = 289 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 176/297 (59%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVDATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHQPGRVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDALKTIL 288 >gi|126654066|ref|ZP_01725892.1| succinyl-CoA synthetase subunit alpha [Bacillus sp. B14905] gi|126589446|gb|EAZ83593.1| succinyl-CoA synthetase subunit alpha [Bacillus sp. B14905] Length = 300 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 170/297 (57%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++ ++K+TKV+VQG+TG+ FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MAVFINKDTKVIVQGITGETALFHTKQMLEY-GTKIVAGVTPGKGGLEIEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A SVIYVP A DAI+E+++AE+ L +CITE IPVLDMV+VK +E Sbjct: 56 TVAEAVAATGATTSVIYVPAPFAADAILEAVDAELELTICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I KG VG++SRSGTLTYEAV Q +Q G+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLTQAGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLE F D T ++VM+GEIGG+AEEEAA ++ + KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLEAFNNDPETYAVVMIGEIGGTAEEEAAAWI----QANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI AM AGI +A +P+ IG +L++++ Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKAMNAAGIEVAETPSVIGETLIKVI 288 >gi|227114766|ref|ZP_03828422.1| succinyl-CoA synthetase subunit alpha [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 290 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKNTKVICQGFTGSQGTFHSEQALAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLTVKVKLDQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQS+ Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKAIL 288 >gi|307203732|gb|EFN82692.1| Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Harpegnathos saltator] Length = 324 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 180/308 (58%), Positives = 234/308 (75%), Gaps = 14/308 (4%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +NTKV+ QG TGK GTFH +QA+ Y T++VGG++PKK T G PVF + Sbjct: 17 NLKIGENTKVICQGFTGKQGTFHCQQALDY-GTKIVGGVNPKKAGTQHLGK----PVFKS 71 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE T A A+VIYVPP GA AI+E+++AE+PLIVCITEGIP DMV+VK RL E++ Sbjct: 72 VKEAKEATGATATVIYVPPPGAAAAIMEAVDAEMPLIVCITEGIPQHDMVKVKRRLLEQN 131 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 132 KSRLIGPNCPGIIAPEQCKIGIMPGHIHQKGKIGIVSRSGTLTYEAVNQTTLAGLGQTLC 191 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD--------EAK 232 VGIGGDP GT+FID L++FL D + I+M+GEIGGSAEE AA++L + + Sbjct: 192 VGIGGDPFNGTDFIDCLDIFLTDPECDGIIMIGEIGGSAEELAAEYLIENNTVGCCSQLL 251 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 G+ KP+V F+AG TAPPGR MGHAGA+ISGGKGGA+DKINA+++AG+ + SPA++G Sbjct: 252 GGKAKPVVSFIAGLTAPPGRRMGHAGAIISGGKGGAQDKINALEKAGVIVTRSPAQMGNE 311 Query: 293 LVELLGSL 300 L++++ L Sbjct: 312 LLKVMTRL 319 >gi|226313081|ref|YP_002772975.1| succinyl-CoA synthetase alpha chain [Brevibacillus brevis NBRC 100599] gi|226096029|dbj|BAH44471.1| succinyl-CoA synthetase alpha chain [Brevibacillus brevis NBRC 100599] Length = 300 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 183/297 (61%), Positives = 224/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+ QG+TG G FHT A+ Y TQ+VGG+ P KG T G +P+F Sbjct: 1 MSILVNKNTKVITQGITGATGLFHTRGAVEY-GTQMVGGVTPGKGGTEVDG----IPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYV P A DAI+E+++AE+ L++CITEGIPVLDMV+VK +E Sbjct: 56 TVKEAVEATGATASVIYVAPPFAADAIMEAVDAELDLVICITEGIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QTS GLGQSTA Sbjct: 116 KTLLVGPNCPGVITPGECKIGIMPGYIHVPGKVGIVSRSGTLTYEAVHQTSTRGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKG EFIDVL++F D TE+++M+GEIGG+AEEEAA+ KKP+V Sbjct: 176 VGIGGDPVKGMEFIDVLKMFNEDPDTEAVIMLGEIGGTAEEEAAE----WIAANMKKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI ++E GI +A +PA IG +LVELL Sbjct: 232 GFIGGQTAPEGKRMGHAGAIISGGKGTAAEKIAKLEECGIRVAKTPAVIGETLVELL 288 >gi|153006561|ref|YP_001380886.1| succinyl-CoA synthetase subunit alpha [Anaeromyxobacter sp. Fw109-5] gi|152030134|gb|ABS27902.1| succinyl-CoA synthetase, alpha subunit [Anaeromyxobacter sp. Fw109-5] Length = 329 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 177/298 (59%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI VD+NTKVLVQG+TG AG+FH EQ + Y T+VV G+ P +G T + VP+F Sbjct: 1 MSIFVDRNTKVLVQGITGAAGSFHAEQMLAY-GTRVVAGVTPGRGGTRF---EQRVPIFD 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TV EA T ANASVI+VPP A DAI+E+ A +PL+V ITEGIPVLDMV VK L+ + Sbjct: 57 TVGEAVRETGANASVIFVPPPFAADAIMEAAGAGVPLVVAITEGIPVLDMVTVKRFLQDR 116 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RL+GPNCPG++TP CKIGIMPG I R G +GI+SRSGTLTYEAV Q + GLGQST Sbjct: 117 PGVRLLGPNCPGVITPGQCKIGIMPGHIHRPGPIGIVSRSGTLTYEAVKQLTDLGLGQST 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPV GT+F+D L F +D TE+IV++GEIGGS EE AA+++ KP+ Sbjct: 177 AVGIGGDPVNGTDFVDCLSRFESDPETEAIVLIGEIGGSGEEWAARYIGKNV----TKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG++APPGR MGHAGAVISG G AE KI A++EAG+ + SPA IG ++ +L Sbjct: 233 VGFIAGRSAPPGRRMGHAGAVISGSSGTAEAKIAALREAGVVVCESPAGIGEAVRHVL 290 >gi|300722389|ref|YP_003711675.1| succinyl-CoA synthetase subunit alpha [Xenorhabdus nematophila ATCC 19061] gi|297628892|emb|CBJ89475.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Xenorhabdus nematophila ATCC 19061] Length = 289 Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 174/297 (58%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG G+FH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGSFHSEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVDATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDQA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKAGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ LL Sbjct: 232 AYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKALL 288 >gi|88798686|ref|ZP_01114269.1| succinyl-CoA synthetase alpha subunit [Reinekea sp. MED297] gi|88778449|gb|EAR09641.1| succinyl-CoA synthetase alpha subunit [Reinekea sp. MED297] Length = 290 Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGSQGTFHSEQAIEY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI E+ +A I LIVCITEGIP LDM+ K +++ Sbjct: 56 TVREAVETTGATATVIYVPAPFCKDAICEAADAGIELIVCITEGIPTLDMLEAKEYVDRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDHGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D +TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPSTEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A+IG +L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLAQIGDALKEVTG 289 >gi|32476525|ref|NP_869519.1| succinyl-CoA synthetase alpha subunit [Rhodopirellula baltica SH 1] gi|32447071|emb|CAD76880.1| putative succinyl-CoA synthetase alpha subunit [Rhodopirellula baltica SH 1] gi|327539988|gb|EGF26585.1| succinyl-CoA synthetase alpha subunit [Rhodopirellula baltica WH47] Length = 290 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 170/300 (56%), Positives = 227/300 (75%), Gaps = 15/300 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ---TQVVGGIHPKKGSTYWTGGNVNVP 57 MSILVDKNTKV+ QG+TG AG FH+ L C+ TQ+VGG+ P KG G +P Sbjct: 1 MSILVDKNTKVICQGITGNAGKFHS----LGCRDYGTQMVGGVTPGKGGQDVEG----IP 52 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 VF TV EA ++T A+A++I+VPP DAI+E+++A I +I ITEG+PV+DMVRV ++ Sbjct: 53 VFDTVEEAVQKTGADATMIFVPPPFTADAILEAVDAGIRVIAAITEGVPVIDMVRVYEKV 112 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + S S LIGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAV+QTS LGQ Sbjct: 113 KASGSTLIGPNCPGLITPGECKIGIMPGYIHNPGKVGVMSRSGTLTYEAVWQTSSLKLGQ 172 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 ST VG+GGDP+ GT +ID+ +++ D+ TE+I+M+GEIGGSAEEEAA F+K+ K Sbjct: 173 STCVGLGGDPIVGTNYIDLFKMYQEDDQTEAILMIGEIGGSAEEEAAAFVKEHV----TK 228 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+ F+AG+TAPPG+ MGHAGA+ISGGKG AE+K+ A+++AGI +APSPA +G ++V+ + Sbjct: 229 PVAAFIAGRTAPPGKRMGHAGAIISGGKGTAEEKVAALEDAGIVVAPSPAEMGEAVVKAM 288 >gi|157114411|ref|XP_001652258.1| succinyl-CoA synthetase small subunit, putative [Aedes aegypti] gi|157114413|ref|XP_001652259.1| succinyl-CoA synthetase small subunit, putative [Aedes aegypti] gi|157114415|ref|XP_001652260.1| succinyl-CoA synthetase small subunit, putative [Aedes aegypti] gi|94468890|gb|ABF18294.1| succinyl-CoA synthetase alpha subunit [Aedes aegypti] gi|108877302|gb|EAT41527.1| succinyl-CoA synthetase small subunit, putative [Aedes aegypti] gi|108877303|gb|EAT41528.1| succinyl-CoA synthetase small subunit, putative [Aedes aegypti] gi|108877304|gb|EAT41529.1| succinyl-CoA synthetase small subunit, putative [Aedes aegypti] Length = 327 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 172/300 (57%), Positives = 233/300 (77%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ N+KV+ QG TGK GTFH++QA+ Y T++VGG+ P KG ++N+PVF + Sbjct: 30 NLKLNSNSKVICQGFTGKQGTFHSQQALEY-GTKLVGGVSPGKGGRQ----HLNLPVFNS 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 V EAK T A+A+VIYVPP GA +AI+E+IEAEIPL+VCITEG+P DMV+VK A L + Sbjct: 85 VKEAKAATGADATVIYVPPPGAANAIMEAIEAEIPLVVCITEGVPQHDMVKVKHALLAQD 144 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 145 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 205 VGIGGDPFNGTDFIDCLEVFLKDPDTKGIILIGEIGGVAEEKAADYLMQYNQGIKAKPVV 264 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA+DKINA+++AG+ + SPA++G+ L + + L Sbjct: 265 SFIAGLSAPPGRRMGHAGAIISGGKGGAQDKINALEKAGVIVTRSPAQMGKELFKEMKRL 324 >gi|109898122|ref|YP_661377.1| succinyl-CoA synthetase, alpha subunit [Pseudoalteromonas atlantica T6c] gi|109700403|gb|ABG40323.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Pseudoalteromonas atlantica T6c] Length = 290 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 175/298 (58%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGGQGTFHSEQAIEY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A A+VIYVP D+I+E+ +A I LIVCITEGIP LDM+ VK + + Sbjct: 56 TVREAVQETGATATVIYVPAPFCKDSIVEAADAGIELIVCITEGIPTLDMLYVKEYVNRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILQMFQDDPKTEAIVMIGEIGGTAEEEAAAFIKANI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A+DK A+++AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADDKFKALEDAGVKTVRSLADIGQGLREITG 289 >gi|251823775|ref|NP_001156571.1| succinyl coenzyme A synthetase alpha subunit [Acyrthosiphon pisum] gi|239792382|dbj|BAH72542.1| ACYPI009606 [Acyrthosiphon pisum] Length = 330 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 178/297 (59%), Positives = 226/297 (76%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ K+TKV+ QG+TGK GTFH+ QAI Y T +VGG+ P KG G +P+F + Sbjct: 37 NLLLTKDTKVICQGMTGKQGTFHSTQAIEY-GTCMVGGVSPGKGGKTHLG----LPIFNS 91 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA++ T A+A+VIYVPP GA AI E+I+AE+PLIVCITEGIP DMVRVK +L ++ Sbjct: 92 VKEARDETGADATVIYVPPPGAAKAISEAIDAEVPLIVCITEGIPQQDMVRVKHKLIRQN 151 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I KGSVG++SRSGTLTYEAV QTSQ GLGQ+ Sbjct: 152 KSRLLGPNCPGIIAPEQCKIGIMPGHIHLKGSVGVVSRSGTLTYEAVHQTSQVGLGQTLC 211 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T I+++GEIGG EE AA++L + KP+V Sbjct: 212 VGIGGDPFNGTDFIDCLEVFLQDPNTHGIILIGEIGGQQEEMAAEYLIEHNTGPNAKPVV 271 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKGGA+DKINA+++AG+ + SPA +G L +L+ Sbjct: 272 SFIAGLTAPPGRRMGHAGAIISGGKGGAQDKINALEKAGVVVTRSPAAMGIELSKLM 328 >gi|225465670|ref|XP_002271746.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296085314|emb|CBI29046.3| unnamed protein product [Vitis vinifera] Length = 329 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 180/297 (60%), Positives = 228/297 (76%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG G +P+F T Sbjct: 34 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGMEHLG----LPIFNT 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 VAEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMV+VKA L + S Sbjct: 89 VAEAKAETRANASVIYVPPPFAAAAIMEAVEAELDLVVCITEGIPQHDMVKVKAALNRQS 148 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G VGI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 149 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTC 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D ++ FLAD TE I+++GEIGG+AEE+AA +K+ G +KP+V Sbjct: 209 VGIGGDPFNGTNFVDCVKKFLADPQTEGIILIGEIGGTAEEDAAALIKES---GTEKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DKI +++ G + SPA+IG +++++ Sbjct: 266 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLRDVGATVVESPAKIGVAMLDVF 322 >gi|325294373|ref|YP_004280887.1| succinyl-CoA synthetase, alpha subunit [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064821|gb|ADY72828.1| succinyl-CoA synthetase, alpha subunit [Desulfurobacterium thermolithotrophum DSM 11699] Length = 300 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 166/299 (55%), Positives = 225/299 (75%), Gaps = 7/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV--NVPV 58 MS+L++K+TKV+VQGLTGK G+FH +Q + Y TQVV G+ P KG W VPV Sbjct: 1 MSVLINKDTKVVVQGLTGKEGSFHAKQCLDY-GTQVVAGVTPGKGGMIWEDDEKRHKVPV 59 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV EA + T ANAS+I+VPP+ A DAI+E+ +A I +I+CITEGIPV DMV+VK LE Sbjct: 60 FNTVEEAVKETGANASLIFVPPAFAADAIMEAADAGIKIIICITEGIPVNDMVKVKRALE 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + R +GPNCPG++TP+ CK+GIMPG IF+KG VGI+SRSGTLTYEA +Q +Q G+GQS Sbjct: 120 GTGVRYVGPNCPGVITPEECKMGIMPGHIFKKGKVGIVSRSGTLTYEAAYQLTQRGIGQS 179 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDPV GT + +E+F D T++IV++GEIGG+ EEEAA+++K+ +KP Sbjct: 180 TVIGIGGDPVPGTTHKEAIEMFNNDPETDAIVLIGEIGGTMEEEAAEYIKENV----EKP 235 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++ ++AG TAPPGR MGHAGA+ISGGKG A+ K++A++ AG + +PA IG ++ + L Sbjct: 236 VIAYIAGVTAPPGRRMGHAGAIISGGKGDAKSKMDALRAAGAYVCETPAVIGETVEKAL 294 >gi|91203545|emb|CAJ71198.1| strongly similar to succinyl-CoA synthetase alpha chain [Candidatus Kuenenia stuttgartiensis] Length = 291 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 166/295 (56%), Positives = 225/295 (76%), Gaps = 9/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 +L++K TKV+ QG+TG+AG+FH Q + Y T++V G+ P KG T G +PVF ++ Sbjct: 1 MLINKETKVVCQGITGQAGSFHAMQMLEY-GTKLVAGVTPGKGGTIHNG----IPVFGSM 55 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA +T ANASVIYVP S A DAI+E+++AEI L+VCITEGIP LDM+RV L S Sbjct: 56 LEAVNKTGANASVIYVPASFAADAIMEAVDAEIALVVCITEGIPTLDMLRVVKYLAAGKS 115 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPNCPGI+TPD+CKIGIMPG I +KGSVG++SRSGTLTYE V+Q +Q+G+GQST G Sbjct: 116 RLIGPNCPGIITPDACKIGIMPGYIHKKGSVGVVSRSGTLTYEIVWQLTQQGIGQSTCAG 175 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP+ GT F+D+L++F DE T +IV++GEIGGS EEEAA+++K E KP++GF Sbjct: 176 IGGDPIIGTHFVDILKMFQHDEETSAIVLIGEIGGSMEEEAAEYIKKEI----TKPVIGF 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG++AP G+ MGHAGA+I+G KG A K+ A+++AG + +PA IG ++ ++L Sbjct: 232 IAGRSAPHGKRMGHAGAIIAGDKGKAVTKVAALQDAGAFMVDNPADIGITVSKIL 286 >gi|120598559|ref|YP_963133.1| succinyl-CoA synthetase subunit alpha [Shewanella sp. W3-18-1] gi|146293362|ref|YP_001183786.1| succinyl-CoA synthetase subunit alpha [Shewanella putrefaciens CN-32] gi|120558652|gb|ABM24579.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella sp. W3-18-1] gi|145565052|gb|ABP75987.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella putrefaciens CN-32] gi|319426664|gb|ADV54738.1| succinyl-CoA synthetase, alpha subunit [Shewanella putrefaciens 200] Length = 290 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 175/293 (59%), Positives = 217/293 (74%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH++QAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSQQAIDY-GTQMVGGVSPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVAATGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG TAP G+ MGHAGA+I+GGKG A DK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAADKFAALEAAGVTTVRSLADIGKAL 284 >gi|108762192|ref|YP_631735.1| succinyl-CoA synthetase subunit alpha [Myxococcus xanthus DK 1622] gi|108466072|gb|ABF91257.1| succinyl-CoA synthetase, alpha subunit [Myxococcus xanthus DK 1622] Length = 299 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 175/299 (58%), Positives = 226/299 (75%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV++NTKVL QG+TG AG+FH +Q + Y T++V G+ P KG T + G VPVF Sbjct: 1 MAILVNENTKVLCQGITGSAGSFHAKQMLEY-GTKLVAGVTPGKGGTTFEG---KVPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TVAEA + T AN SV++VPP A D+I+E+ +A + LI+ ITEGIPV DMVR K L+ K Sbjct: 57 TVAEAVKETGANTSVVFVPPPFAADSIMEAADAGVALIIVITEGIPVNDMVRAKRYLQGK 116 Query: 120 SSSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RL+GPNCPG++TP + CKIGIMPG I + G +G++SRSGTLTYEAV Q +Q GLGQS Sbjct: 117 PGIRLVGPNCPGVITPGALCKIGIMPGHIHKPGRIGVVSRSGTLTYEAVHQLTQLGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV GT+F+DVL+LF AD T++++M+GEIGG AEE A+++ E KP Sbjct: 177 TAVGIGGDPVNGTDFVDVLKLFNADPDTDAVIMIGEIGGDAEERGAEYVARE----FTKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 I GF+AG++APPG+ MGHAGA+ISGGKG A +KI AM+ AGI +A SPA +G +L E L Sbjct: 233 IAGFIAGQSAPPGKRMGHAGAIISGGKGTATEKIKAMEAAGILMAASPAELGTTLQEAL 291 >gi|197284469|ref|YP_002150341.1| succinyl-CoA synthetase subunit alpha [Proteus mirabilis HI4320] gi|227356647|ref|ZP_03841033.1| succinyl-CoA synthetase alpha chain [Proteus mirabilis ATCC 29906] gi|194681956|emb|CAR41371.1| succinyl-CoA synthetase alpha chain [Proteus mirabilis HI4320] gi|227163155|gb|EEI48086.1| succinyl-CoA synthetase alpha chain [Proteus mirabilis ATCC 29906] Length = 290 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 176/297 (59%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGTAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ LL Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKSLL 288 >gi|146310887|ref|YP_001175961.1| succinyl-CoA synthetase subunit alpha [Enterobacter sp. 638] gi|145317763|gb|ABP59910.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Enterobacter sp. 638] Length = 289 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 174/297 (58%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDALKAII 288 >gi|157375946|ref|YP_001474546.1| succinyl-CoA synthetase, alpha subunit [Shewanella sediminis HAW-EB3] gi|157318320|gb|ABV37418.1| succinyl-CoA synthetase, alpha subunit [Shewanella sediminis HAW-EB3] Length = 290 Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 174/293 (59%), Positives = 218/293 (74%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAIDY-GTQMVGGVSPGKGGQVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A A+VIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVAETGATATVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA++++ KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPLTEAIVMIGEIGGTAEEEAAEYIQANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLAEIGKAL 284 >gi|225713910|gb|ACO12801.1| Succinyl-CoA ligase subunit alpha, mitochondrial precursor [Lepeophtheirus salmonis] gi|290561819|gb|ADD38307.1| Succinyl-CoA ligase subunit alpha, mitochondrial [Lepeophtheirus salmonis] Length = 327 Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 231/298 (77%), Gaps = 6/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++++ K++KV+ QG TGK GTFH++QAI Y T +VGG+ PKK G +PVF Sbjct: 29 MNMMLTKDSKVICQGFTGKQGTFHSQQAIDY-GTNMVGGVSPKKAGQTHLG----LPVFG 83 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEK 119 +V EA ++T A+A+VIYVPP GA AI+E++EAEI LIVCITEGIP DMVRVK A +++ Sbjct: 84 SVKEAVQKTNADATVIYVPPPGAAAAILEAVEAEIGLIVCITEGIPQQDMVRVKDALIQQ 143 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT+Q GLGQ+ Sbjct: 144 SKSRLIGPNCPGIIAPNKCKIGIMPGHIHQEGCIGVVSRSGTLTYEAVHQTTQVGLGQTL 203 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP GT FID L++FL D T+ I+M+GEIGG+AEE+AA +L++ +KP+ Sbjct: 204 CIGIGGDPFNGTNFIDCLDIFLKDPKTKGIIMIGEIGGAAEEKAADYLQEHNSGANQKPV 263 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V F+AG TAPPGR MGHAGA+ISGGKG A+ KI A++ AG+ + SPA++G +LV+L+ Sbjct: 264 VSFIAGVTAPPGRRMGHAGAIISGGKGTAQTKIAALEAAGVAVTSSPAKMGTTLVQLM 321 >gi|169827110|ref|YP_001697268.1| succinyl-CoA synthetase subunit alpha [Lysinibacillus sphaericus C3-41] gi|168991598|gb|ACA39138.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Lysinibacillus sphaericus C3-41] Length = 300 Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 169/297 (56%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++ ++K+TKV+VQG+TG+ FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MAVFINKDTKVIVQGITGETALFHTKQMLEY-GTKIVAGVTPGKGGLEIEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A SVIYVP A DAI+E+++AE+ L +CITE IPVLDMV+VK +E Sbjct: 56 TVAEAVAATGATTSVIYVPAPFAADAILEAVDAELELTICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I KG VG++SRSGTLTYEAV Q +Q G+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLTQAGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T ++VM+GEIGG+AEEEAA ++ + KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLDAFNNDPETYAVVMIGEIGGTAEEEAAAWI----QANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI AM AGI +A +P+ IG +L++++ Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKAMNAAGIEVAETPSVIGETLIKVI 288 >gi|189499412|ref|YP_001958882.1| succinyl-CoA synthetase, alpha subunit [Chlorobium phaeobacteroides BS1] gi|189494853|gb|ACE03401.1| succinyl-CoA synthetase, alpha subunit [Chlorobium phaeobacteroides BS1] Length = 315 Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 169/303 (55%), Positives = 228/303 (75%), Gaps = 10/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T+++VQG+TG GTFHT Q IL T VV G+ P KG +TG + + Sbjct: 16 MSVLVNKDTRLVVQGITGGEGTFHTSQ-ILEYGTNVVAGVTPGKGGLEYTGNDRDTFLRP 74 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV +A AN SVI+VP A DAI+E+ EA + +I+CITEGIPV DM++ Sbjct: 75 VPVFNTVKDAVVVAGANTSVIFVPAPFAADAIMEAAEAGLKVIICITEGIPVNDMMKAYR 134 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + L+GPNCPG++TP K+GIMPG I +KGS+G++SRSGTLTYEAV Q ++ GL Sbjct: 135 YVQEKGAVLVGPNCPGVITPGEAKVGIMPGFIHKKGSIGVVSRSGTLTYEAVHQLTEVGL 194 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDPV GT F+D ++LF D+ TE +VM+GEIGGSAEEEA++++ K+ Sbjct: 195 GQSTCIGIGGDPVIGTRFLDAIKLFAKDDETEGLVMIGEIGGSAEEEASEYI----KKHF 250 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG AEDKI AM++AGI + +PA IG ++++ Sbjct: 251 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAEDKIRAMEKAGIHVVENPADIGDTMLK 310 Query: 296 LLG 298 LG Sbjct: 311 ALG 313 >gi|145299310|ref|YP_001142151.1| succinyl-CoA ligase, alpha subunit [Aeromonas salmonicida subsp. salmonicida A449] gi|142852082|gb|ABO90403.1| succinyl-CoA ligase, alpha subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 290 Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 175/298 (58%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+A I LIV ITEGIP LDM+ VK +L+++ Sbjct: 56 TVRDAVETTGATASVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTLDMLEVKVKLQET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFQNDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A +K A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAAEKFAALEDAGVKTVRSLADIGKALREVTG 289 >gi|113969978|ref|YP_733771.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Shewanella sp. MR-4] gi|114047213|ref|YP_737763.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Shewanella sp. MR-7] gi|117920160|ref|YP_869352.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Shewanella sp. ANA-3] gi|113884662|gb|ABI38714.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella sp. MR-4] gi|113888655|gb|ABI42706.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella sp. MR-7] gi|117612492|gb|ABK47946.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella sp. ANA-3] Length = 290 Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 175/293 (59%), Positives = 216/293 (73%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH++QAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSQQAIDY-GTQMVGGVSPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP DAI+E+I+ I LIVCITEGIP LDM+ VK +LE++ Sbjct: 56 TVKDAVAATGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLEVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG TAP G+ MGHAGA+I+GGKG A DK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAADKFAALEAAGVTTVRSLADIGKAL 284 >gi|226330944|ref|ZP_03806462.1| hypothetical protein PROPEN_04867 [Proteus penneri ATCC 35198] gi|225201739|gb|EEG84093.1| hypothetical protein PROPEN_04867 [Proteus penneri ATCC 35198] Length = 289 Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGTAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ L+ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEAIKSLI 288 >gi|115803428|ref|XP_786544.2| PREDICTED: similar to succinyl-CoA synthetase alpha subunit [Strongylocentrotus purpuratus] gi|115976687|ref|XP_001181612.1| PREDICTED: similar to succinyl-CoA synthetase alpha subunit [Strongylocentrotus purpuratus] Length = 326 Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 171/292 (58%), Positives = 217/292 (74%), Gaps = 6/292 (2%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 ++K TKV+ QG+TGK G FHT QAI Y T +VGG+ P K G +PVF + E Sbjct: 32 INKTTKVICQGITGKQGAFHTTQAIEY-GTNMVGGVTPGKSGQVSCG----LPVFDSCHE 86 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS-SR 123 AK +T +ASVIYVP A AI+E+I+AEI L+VCITEGIP DMV+VK RL + S +R Sbjct: 87 AKAKTGCDASVIYVPAPFAAPAIMEAIDAEIGLVVCITEGIPQQDMVKVKHRLSRQSKTR 146 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPNCPGI+ P +CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQ+ VGI Sbjct: 147 LVGPNCPGIIAPGACKIGIMPGHIHKEGKIGIVSRSGTLTYEAVAQTTAVGLGQTLCVGI 206 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDP GT F+D LE+FL D ATE IV++GEIGG AEE+AA+FLK KP+ F+ Sbjct: 207 GGDPFNGTNFVDCLEIFLNDPATEGIVLIGEIGGGAEEKAAEFLKQHNSGPDAKPVAAFI 266 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 AG TAPPGR MGHAGA+ISGGKGGA +KI A+K+AG+ + SPA++G ++++ Sbjct: 267 AGLTAPPGRRMGHAGAIISGGKGGATEKIQALKDAGVVVTMSPAQMGTTILK 318 >gi|237749080|ref|ZP_04579560.1| succinyl-CoA synthetase subunit alpha [Oxalobacter formigenes OXCC13] gi|229380442|gb|EEO30533.1| succinyl-CoA synthetase subunit alpha [Oxalobacter formigenes OXCC13] Length = 292 Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 165/299 (55%), Positives = 227/299 (75%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++KN++V+VQGLTGK G FHTE ++ Y + VGG+ PKKG T + +N+PV Sbjct: 1 MSILINKNSRVIVQGLTGKTGAFHTEMSMNYAFGKECYVGGVTPKKGGTTF----LNLPV 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F V +A+E+T AN SVIYVPP A AI E++EA I ++CITEGIPV DM+R + +++ Sbjct: 57 FNNVKDAREQTGANVSVIYVPPPFAAAAIDEAVEAGIEFVICITEGIPVEDMLRTRYKMQ 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 ++ L+GPNCPGI+TPD KIGIMPG I +KGS+G++S+SGTLTYEA Q ++ GLGQS Sbjct: 117 GKNTILLGPNCPGIITPDELKIGIMPGHIHKKGSIGVVSKSGTLTYEAASQLAEFGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VG+GGDP+ G + IDVL++F D TE+++MVGEIGG+ EE AA+++K+ KP Sbjct: 177 TVVGVGGDPINGLKHIDVLKMFNDDPETEAVIMVGEIGGNDEETAAEWVKEN----MTKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG TAPPG+ MGHAGA+ISGGKG A++K++ M+E GI + +PA IG++L +L Sbjct: 233 VVGFIAGVTAPPGKRMGHAGAIISGGKGTAQEKLSVMEECGIKVTRNPAEIGKTLKSVL 291 >gi|313895074|ref|ZP_07828631.1| succinyl-CoA synthetase, alpha subunit [Selenomonas sp. oral taxon 137 str. F0430] gi|312975969|gb|EFR41427.1| succinyl-CoA synthetase, alpha subunit [Selenomonas sp. oral taxon 137 str. F0430] Length = 301 Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 167/297 (56%), Positives = 221/297 (74%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTK +VQG+TGKA FHT Q +L TQ+V G+ P K G VPV+ Sbjct: 1 MSILIDKNTKAIVQGITGKAALFHTRQ-MLDAGTQIVAGVTPGKAGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T ANASVIYVP A D+I+E+++AE+PL++CITE IPVLDMV+V+ ++ Sbjct: 56 TVRDAVEATGANASVIYVPARFAADSIMEAVDAELPLVICITEHIPVLDMVKVRRYMQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPG+LTP+ K+GI P S+ + G VG++SRSGTLTYEA FQ + G+GQ+T Sbjct: 116 KSRLVGPNCPGLLTPNQAKLGITPTSVAKPGHVGLVSRSGTLTYEAAFQLTNAGIGQTTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVK +FIDVL+LF D T ++ M+GEIGG+AEEEAA+++K+ +KP+ Sbjct: 176 VGIGGDPVKDMDFIDVLKLFKEDPDTLAVFMIGEIGGTAEEEAAKWIKENMP---EKPVA 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+ APPG+ MGHAGA+ISGGKG A DK+ A+ AGI +A + A IG ++V+LL Sbjct: 233 AFIAGRQAPPGKRMGHAGAIISGGKGTAADKVAALNAAGIPVADTVAHIGETMVKLL 289 >gi|222151081|ref|YP_002560235.1| succinyl-CoA synthetase alpha subunit [Macrococcus caseolyticus JCSC5402] gi|222120204|dbj|BAH17539.1| succinyl-CoA synthetase alpha subunit [Macrococcus caseolyticus JCSC5402] Length = 302 Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 170/297 (57%), Positives = 216/297 (72%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M + +DK+TKV+VQG+TG FHT+Q I Y T++V G+ P KG G VPVF Sbjct: 1 MGVFIDKDTKVIVQGITGSTALFHTKQMIEY-GTKIVAGVTPGKGGMEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A SVIYVP A DAI+E ++AE+ L +CITE IPVLDMV+VK ++ Sbjct: 56 TVEEAVKATGATVSVIYVPAPFAADAIVECVDAELDLAICITEHIPVLDMVKVKRYMQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q +Q G+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTQAGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID LE F D T ++VM+GEIGG+AEEEAA+++ K KP+V Sbjct: 176 VGIGGDPVNGTNFIDALEAFNNDPETLAVVMIGEIGGTAEEEAAEWV----KANMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI M GI A +P+ IG +L+E + Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTMNACGIKTAATPSEIGSTLIERI 288 >gi|126174725|ref|YP_001050874.1| succinyl-CoA synthetase subunit alpha [Shewanella baltica OS155] gi|153001024|ref|YP_001366705.1| succinyl-CoA synthetase subunit alpha [Shewanella baltica OS185] gi|160875737|ref|YP_001555053.1| succinyl-CoA synthetase subunit alpha [Shewanella baltica OS195] gi|217973016|ref|YP_002357767.1| succinyl-CoA synthetase subunit alpha [Shewanella baltica OS223] gi|304409102|ref|ZP_07390723.1| succinyl-CoA synthetase, alpha subunit [Shewanella baltica OS183] gi|307303105|ref|ZP_07582860.1| succinyl-CoA synthetase, alpha subunit [Shewanella baltica BA175] gi|125997930|gb|ABN62005.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella baltica OS155] gi|151365642|gb|ABS08642.1| succinyl-CoA synthetase, alpha subunit [Shewanella baltica OS185] gi|160861259|gb|ABX49793.1| succinyl-CoA synthetase, alpha subunit [Shewanella baltica OS195] gi|217498151|gb|ACK46344.1| succinyl-CoA synthetase, alpha subunit [Shewanella baltica OS223] gi|304352923|gb|EFM17320.1| succinyl-CoA synthetase, alpha subunit [Shewanella baltica OS183] gi|306913465|gb|EFN43887.1| succinyl-CoA synthetase, alpha subunit [Shewanella baltica BA175] gi|315267926|gb|ADT94779.1| succinyl-CoA synthetase, alpha subunit [Shewanella baltica OS678] Length = 290 Score = 335 bits (859), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 174/293 (59%), Positives = 217/293 (74%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH++QAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSQQAIDY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVAATGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEE+AA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGNAEEDAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKAL 284 >gi|268318044|ref|YP_003291763.1| succinyl-CoA synthetase, alpha subunit [Rhodothermus marinus DSM 4252] gi|262335578|gb|ACY49375.1| succinyl-CoA synthetase, alpha subunit [Rhodothermus marinus DSM 4252] Length = 292 Score = 335 bits (859), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 171/300 (57%), Positives = 224/300 (74%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD+NT+++VQG+TGK GTFHT+Q I Y T VV G+ P KG +++ PVF Sbjct: 1 MSILVDRNTRLVVQGITGKEGTFHTQQMIEYG-TNVVAGVTPGKGGQK----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+ AN S+I+VPP+ A DAI+E+ +A I +IVCITEGIPV DM+ V +++ Sbjct: 56 TVAEAVEKEGANTSIIFVPPAFAADAILEAADAGIEVIVCITEGIPVRDMIPVYHYVKQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +LIGPNCPG++TP K+GIMPG IF++G +G++SRSGTLTYEAV Q ++ GLGQSTA Sbjct: 116 GVKLIGPNCPGVITPGQAKVGIMPGMIFKEGPIGVVSRSGTLTYEAVDQLTRLGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G F DVL LF D TE++V++GEIGG+AEEEAA F+K+ KP+ Sbjct: 176 VGIGGDPIIGLRFTDVLRLFQDDPETEAVVLIGEIGGTAEEEAAAFIKEH----MTKPVF 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPGR MGHAGA+I+GGKG AE+K A++ AG + +PA IG ++ E LG+L Sbjct: 232 AFIAGATAPPGRRMGHAGAIIAGGKGTAEEKFKALEAAGAVVIRNPALIGETVREHLGAL 291 >gi|221055894|ref|XP_002259085.1| succinyl-coa synthetase alpha subunit [Plasmodium knowlesi strain H] gi|193809156|emb|CAQ39858.1| succinyl-coa synthetase alpha subunit, putative [Plasmodium knowlesi strain H] Length = 327 Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 170/305 (55%), Positives = 224/305 (73%), Gaps = 9/305 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--GNVNVPVFT 60 + VDKNT V+ QG+TGK GTFHT +A+ Y T++VGG++P+K T W +PVF Sbjct: 24 VFVDKNTTVICQGITGKQGTFHTTEAMKY-GTKMVGGVNPRKKGTMWESLDKKYTLPVFG 82 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 + EAKE+T ASVIYVPP A +AIIE++EAEIPL+VCITEGI DMV VK L+ S Sbjct: 83 STMEAKEKTNCYASVIYVPPEHAKNAIIEAVEAEIPLVVCITEGICQHDMVEVKHCLKMS 142 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++LIGPNCPG++ P CKIGIMP I +KG VGI+SRSGTLTYE V QT++ GLGQST Sbjct: 143 KKTKLIGPNCPGVIKPGECKIGIMPSHIHKKGCVGIVSRSGTLTYEGVNQTTKVGLGQST 202 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL----KDEAKRGR 235 +GIGGDP GT FID ++LFL D+ T+ I+++GEIGG AEE+ A++L D+ K+ + Sbjct: 203 CIGIGGDPFHGTNFIDCIKLFLEDDETKCILLIGEIGGDAEEQVAEWLIQNNVDDGKK-K 261 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+ FVAGK APPG+ MGHAGA+ISGGKG A++KI A++ AG+ +PA +G+ + Sbjct: 262 KKPVFAFVAGKCAPPGKRMGHAGALISGGKGTADEKIKALEAAGVHTIMNPALMGQEIYS 321 Query: 296 LLGSL 300 ++ L Sbjct: 322 IMKDL 326 >gi|268590345|ref|ZP_06124566.1| succinyl-CoA synthetase subunit alpha [Providencia rettgeri DSM 1131] gi|291314255|gb|EFE54708.1| succinyl-CoA synthetase subunit alpha [Providencia rettgeri DSM 1131] Length = 290 Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 176/297 (59%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVTPGKGGTVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHMPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF AD TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQADPQTEAIVMIGEIGGNAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ LL Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKSLL 288 >gi|283784484|ref|YP_003364349.1| succinyl-CoA synthetase alpha chain [Citrobacter rodentium ICC168] gi|282947938|emb|CBG87502.1| succinyl-CoA synthetase alpha chain [Citrobacter rodentium ICC168] Length = 289 Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 174/293 (59%), Positives = 218/293 (74%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGAIATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEAL 284 >gi|239993690|ref|ZP_04714214.1| Succinyl-CoA synthetase, alpha subunit [Alteromonas macleodii ATCC 27126] gi|332141300|ref|YP_004427038.1| Succinyl-CoA synthetase, alpha subunit [Alteromonas macleodii str. 'Deep ecotype'] gi|327551322|gb|AEA98040.1| Succinyl-CoA synthetase, alpha subunit [Alteromonas macleodii str. 'Deep ecotype'] Length = 290 Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+ +A I LIVCITEGIP LDM+ VK +E Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSIVEAADAGIELIVCITEGIPTLDMLYVKEYVEAK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILQMFQDDPQTEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+I+GGKG A++K A+++AG+ S A IG++L E G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIIAGGKGTADEKFKALEDAGVKTVRSLAEIGKALRETTG 289 >gi|68171548|ref|ZP_00544926.1| Succinyl-CoA ligase, alpha subunit [Ehrlichia chaffeensis str. Sapulpa] gi|88657940|ref|YP_507767.1| succinyl-CoA synthetase, alpha subunit [Ehrlichia chaffeensis str. Arkansas] gi|67999032|gb|EAM85705.1| Succinyl-CoA ligase, alpha subunit [Ehrlichia chaffeensis str. Sapulpa] gi|88599397|gb|ABD44866.1| succinyl-CoA synthetase, alpha subunit [Ehrlichia chaffeensis str. Arkansas] Length = 293 Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 186/299 (62%), Positives = 227/299 (75%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+ NTKV+ QG TG GTFH+EQAI Y T +VGG+ P KG TY ++N+PVF Sbjct: 1 MSVLVNSNTKVICQGFTGAHGTFHSEQAIAY-GTNMVGGVTPGKGGTY----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +AK ANA+VIYVP A DAI+E+IEAEI LIVCITEGIP LDMV+VK L S Sbjct: 56 TVKQAKLEAKANATVIYVPAPYAADAILEAIEAEIELIVCITEGIPTLDMVQVKHALLNS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SS LIGPNCPGI+TP+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT++ GLGQST Sbjct: 116 SSTLIGPNCPGIITPEECKIGIMPGYIHKRGHIGIVSRSGTLTYEAVAQTTEVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G F D + LF+ D T I+M+GEIGGS EEEAA+F+K G KP+V Sbjct: 176 IGIGGDPIHGMSFTDCIRLFINDPDTHGIIMIGEIGGSEEEEAAEFIK---LSGTNKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AGKTAPPG+ MGHAGA+ SG G AE KI AMK AGI IA +PA IG++++E + + Sbjct: 233 GFIAGKTAPPGKRMGHAGAISSGTSGSAESKIEAMKNAGIIIAETPAVIGKTMLEAMNN 291 >gi|127512587|ref|YP_001093784.1| succinyl-CoA synthetase, alpha subunit [Shewanella loihica PV-4] gi|126637882|gb|ABO23525.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella loihica PV-4] Length = 290 Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 174/293 (59%), Positives = 215/293 (73%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A A+VIYVP DAI+E+I+ I LIVCITEGIP LDM+ VK +LE++ Sbjct: 56 TVKDAVAETGATATVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLEVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG +L Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGSAL 284 >gi|24373497|ref|NP_717540.1| succinyl-CoA synthase, alpha subunit [Shewanella oneidensis MR-1] gi|24347797|gb|AAN54984.1|AE015636_8 succinyl-CoA synthase, alpha subunit [Shewanella oneidensis MR-1] Length = 290 Score = 335 bits (858), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 174/293 (59%), Positives = 217/293 (74%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH++QAI Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSQQAIDY-GTQMVGGVSPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVAATGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG TAP G+ MGHAGA+I+GGKG A DK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAADKFAALEAAGVTTVRSLADIGKAL 284 >gi|270157990|ref|ZP_06186647.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Legionella longbeachae D-4968] gi|289163744|ref|YP_003453882.1| succinyl-CoA synthetase, alpha subunit [Legionella longbeachae NSW150] gi|269990015|gb|EEZ96269.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Legionella longbeachae D-4968] gi|288856917|emb|CBJ10731.1| succinyl-CoA synthetase, alpha subunit [Legionella longbeachae NSW150] Length = 292 Score = 335 bits (858), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 176/299 (58%), Positives = 220/299 (73%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K TKVL QG TGK GT+H+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLVNKQTKVLCQGFTGKQGTYHSEQAIAY-GTQMVGGVTPGKGGQMHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A ASVIYVP D+I+E+ +A I LIVCITEG+PVLDM++VK LE + Sbjct: 56 TMREAVQETKAEASVIYVPAPFCKDSILEAADAGIQLIVCITEGVPVLDMLQVKVYLENN 115 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +RLIGPNCPGI+TP CKIGIMPGSI G VGI+SRSGTLTYEAV QT+ +G GQST Sbjct: 116 TQARLIGPNCPGIITPGECKIGIMPGSIHLPGKVGIVSRSGTLTYEAVKQTTDKGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT FID L LF D T++I+MVGEIGGSAEEEAA+++K KP+ Sbjct: 176 CIGIGGDPIPGTNFIDALALFEQDSQTQAIIMVGEIGGSAEEEAAEYIKSHV----SKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG TAP G+ MGHAGA+ISGGKG A +K A++ AG+ SPA +G ++ E+ G Sbjct: 232 VSYIAGVTAPAGKRMGHAGAIISGGKGTAAEKYAALEAAGVRTVRSPADLGDAVAEVTG 290 >gi|83647428|ref|YP_435863.1| succinyl-CoA synthetase subunit alpha [Hahella chejuensis KCTC 2396] gi|83635471|gb|ABC31438.1| Succinyl-CoA synthetase, alpha subunit [Hahella chejuensis KCTC 2396] Length = 291 Score = 335 bits (858), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A ASVIYVP D+I+E+ A I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKEAVEQTGAEASVIYVPAPFCKDSILEAANAGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDFGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGG+AEEEAA+F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFQKDAQTEAIVMIGEIGGTAEEEAAEFIKNNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A +K A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAAEKFAALEQAGVKTVRSLADIGKALAEVTG 289 >gi|332376625|gb|AEE63452.1| unknown [Dendroctonus ponderosae] Length = 328 Score = 335 bits (858), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 177/300 (59%), Positives = 229/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ N+KV+ QG TGK GTFH++QAI Y T+VVGG+ P KG ++++PVF T Sbjct: 31 NLKLNANSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGKT----HLDLPVFNT 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA+ T A+A+VIYVPP GA AI E+I+AE+PLIVCITEGIP DMVRVK +L + Sbjct: 86 VKEARNATGADATVIYVPPPGAAAAINEAIDAEVPLIVCITEGIPQHDMVRVKHKLLRQG 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P+ CKIGIMPG I +KG VG++SRSGTLTYEAV QT+Q GLGQ+ Sbjct: 146 KSRLIGPNCPGIIAPEQCKIGIMPGHIHQKGIVGVVSRSGTLTYEAVHQTTQVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEQAADYLNKHNSGPNAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA+DKINA+++AG+ + SPA++G L++ + L Sbjct: 266 SFIAGISAPPGRRMGHAGAIISGGKGGAQDKINALEKAGVIVTRSPAQMGTELLKEMRRL 325 >gi|153873563|ref|ZP_02002105.1| succinyl-CoA synthetase alpha chain [Beggiatoa sp. PS] gi|152069972|gb|EDN67896.1| succinyl-CoA synthetase alpha chain [Beggiatoa sp. PS] Length = 291 Score = 334 bits (857), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 172/299 (57%), Positives = 223/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD +TKV+ QG TGK GTFH+EQ I Y T++VGG+ P +G ++++PVF Sbjct: 1 MSILVDADTKVICQGFTGKQGTFHSEQCIAY-GTKLVGGVTPGRGGQT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A S+IYVP + A DAI+E+ + I LIVCITEGIPVLDM++VK L Sbjct: 56 TVREAVEKTGATVSMIYVPAAFAADAILEAANSGIQLIVCITEGIPVLDMLKVKTALTDH 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RLIGPNCPGI+TP+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 116 YPQVRLIGPNCPGIITPNGCKIGIMPGFIHQRGRIGIVSRSGTLTYEAVAQTTQNGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +G+GGDP+ G +FID L+LF D TE IVMVGEIGG+ EE AA ++K KP Sbjct: 176 TCIGMGGDPIHGMDFIDCLKLFEQDPQTEGIVMVGEIGGTDEEAAASYIKSAI----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +V ++AG TAPPG+ MGHAGA+I+GGKG A++KI A++ AG+ +A +PA IG+ +++ L Sbjct: 232 VVAYIAGVTAPPGKRMGHAGAIIAGGKGTAQEKIAALEAAGVSVARNPAEIGQRILKHL 290 >gi|156098362|ref|XP_001615213.1| succinyl-CoA synthetase alpha subunit [Plasmodium vivax SaI-1] gi|148804087|gb|EDL45486.1| succinyl-CoA synthetase alpha subunit, putative [Plasmodium vivax] Length = 328 Score = 334 bits (857), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 175/305 (57%), Positives = 222/305 (72%), Gaps = 8/305 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--GNVNVPVFT 60 + VDKNT V+ QG+TGK GTFHT +A+ Y T++VGG++P+K T W +PVF Sbjct: 24 VFVDKNTTVICQGITGKQGTFHTTEAMKY-GTKMVGGVNPRKKGTMWESLDKKYTLPVFG 82 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 + EAKE+T ASVIYVPP A +AIIESIEAEIPL+VCITEGI DMV+VK L S Sbjct: 83 STIEAKEKTNCYASVIYVPPEHAKNAIIESIEAEIPLVVCITEGICQHDMVQVKHCLNMS 142 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++LIGPNCPG++ P CKIGIMP I KG VGI+SRSGTLTYE V QT++ GLGQST Sbjct: 143 KKTKLIGPNCPGVIKPGECKIGIMPSHIHTKGCVGIVSRSGTLTYEGVNQTTKVGLGQST 202 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL----KDEAKRGR 235 +GIGGDP GT FID L+LFL DE T+ I+++GEIGG AEE+ A++L D+ K+ + Sbjct: 203 CIGIGGDPFHGTSFIDCLKLFLEDEETKCILLIGEIGGDAEEQVAEWLIQNNVDDGKKKK 262 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+ FVAGK APPG+ MGHAGA+ISGGKG A+DKI A+K AG+ +P +G+ + Sbjct: 263 KKPVFAFVAGKCAPPGKRMGHAGALISGGKGTADDKIEALKSAGVHTIMNPTLMGQEIYS 322 Query: 296 LLGSL 300 ++ L Sbjct: 323 VMNGL 327 >gi|119476710|ref|ZP_01617020.1| succinyl-CoA synthetase alpha subunit [marine gamma proteobacterium HTCC2143] gi|119449966|gb|EAW31202.1| succinyl-CoA synthetase alpha subunit [marine gamma proteobacterium HTCC2143] Length = 291 Score = 334 bits (857), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 176/298 (59%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA E T A+ASVIYVP D+I+E+ + I LIVCITEGIP LDM+ K R ++ Sbjct: 56 TVSEAVEATGADASVIYVPAPFCKDSILEAANSGIKLIVCITEGIPTLDMLDCKVRCDQL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGRVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D ATE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFQNDPATEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG +L EL G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLAEIGDALSELTG 289 >gi|321465554|gb|EFX76555.1| hypothetical protein DAPPUDRAFT_306118 [Daphnia pulex] Length = 327 Score = 334 bits (857), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 180/298 (60%), Positives = 225/298 (75%), Gaps = 7/298 (2%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + K+T+VL QG TGK GTFH++QAI Y T +VGG+ P KG G VPVF TV E Sbjct: 35 LTKSTRVLCQGFTGKQGTFHSKQAIDY-GTNMVGGVSPGKGGKVHLG----VPVFNTVLE 89 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSR 123 AKE +A+VIYVPP GA AI+E+++AEIPLIVCITEGIP DMV+VK RL ++ SR Sbjct: 90 AKEAVQPDATVIYVPPPGAAKAIMEAMDAEIPLIVCITEGIPQQDMVKVKHRLMRQNKSR 149 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 LIGPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQ+ VGI Sbjct: 150 LIGPNCPGIIAPGKCKIGIMPGHIHQQGCVGIVSRSGTLTYEAVHQTTQVGLGQTLCVGI 209 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDP GT FID LE+FL D T+ I+++GEIGG AEE AA++L +KP+V F+ Sbjct: 210 GGDPFNGTNFIDCLEVFLKDPETKGIILIGEIGGGAEERAAEYLTQHNSGDNRKPVVSFI 269 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV-ELLGSL 300 AG TAPPGR MGHAGA+ISGGKGGA+DKI A++ AG+ + SPA++G +L+ E++G + Sbjct: 270 AGLTAPPGRRMGHAGAIISGGKGGAQDKIMALERAGVVVTRSPAQLGTTLMKEMVGKV 327 >gi|294054272|ref|YP_003547930.1| succinyl-CoA synthetase, alpha subunit [Coraliomargarita akajimensis DSM 45221] gi|293613605|gb|ADE53760.1| succinyl-CoA synthetase, alpha subunit [Coraliomargarita akajimensis DSM 45221] Length = 294 Score = 334 bits (857), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 170/300 (56%), Positives = 220/300 (73%), Gaps = 11/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+T+++VQG+TGK GTFHT+Q Y T VV G+ P KG W VPV Sbjct: 1 MSILVNKDTRLVVQGITGKTGTFHTKQCAEY-GTNVVAGVTPGKGGQLWED---KVPVCN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TVAEA + ANASVIYVPP+ AGD+I+E+IEAEIPL++CITEG+PV DM ++ RL Sbjct: 57 TVAEAVKEHGANASVIYVPPAFAGDSILEAIEAEIPLVICITEGVPVRDMAEIRRRLYFH 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RLIGPNCPGI+TP CKIGIMPG I + G VG++SRSGTLTYEAV+Q +Q G GQS Sbjct: 117 NCKTRLIGPNCPGIITPGECKIGIMPGYIHKPGRVGVVSRSGTLTYEAVWQLTQRGHGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ GT D + +F D T++I+M+GEIGGSAEEEA ++K+ KKP Sbjct: 177 TCIGIGGDPINGTSQTDAIRMFNEDPDTDAIIMIGEIGGSAEEEACAYIKEHV----KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + GF+AG +AP GRTMGHAGA++S G G AE K AM++AG+ IA +P+ I +L+++ Sbjct: 233 VAGFIAGASAPKGRTMGHAGAIVSASGAGTAEAKFAAMEDAGVSIARNPSEIADALLKIY 292 >gi|330829378|ref|YP_004392330.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Aeromonas veronii B565] gi|328804514|gb|AEB49713.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Aeromonas veronii B565] Length = 290 Score = 334 bits (857), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 173/298 (58%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+V+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTRVICQGFTGGQGTFHSEQALSY-GTQLVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+A I LIV ITEGIP LDM+ VK +L+++ Sbjct: 56 TVRDAVEATGATASVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTLDMLDVKVKLQET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGG+AEE+AA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFQNDPQTEAIVMIGEIGGNAEEDAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A +K A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAAEKFAALEDAGVKTVRSLADIGKALREVTG 289 >gi|295096566|emb|CBK85656.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 289 Score = 334 bits (857), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I R G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHRPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKSII 288 >gi|311694416|gb|ADP97289.1| succinyl-CoA synthetase, alpha subunit [marine bacterium HP15] Length = 290 Score = 334 bits (857), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 173/298 (58%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGAQGTFHSEQAIAY-GTKMVGGVSPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A A+VIYVP DAIIE+ +A I LIVCITEGIP +DM+ K +++ Sbjct: 56 TVRDAVEATGAEATVIYVPAPFCKDAIIEAADAGIQLIVCITEGIPTIDMLYAKEYVDRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDFGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G+ FID+L L D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 IGIGGDPIPGSNFIDILALLEKDPETEAIVMIGEIGGTAEEEAAAYIKQNV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A+DK A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADDKFAALEDAGVRTVRSLAEIGQALKEVTG 289 >gi|16764109|ref|NP_459724.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62179313|ref|YP_215730.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161615034|ref|YP_001588999.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167552842|ref|ZP_02346593.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167993016|ref|ZP_02574111.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230618|ref|ZP_02655676.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168238883|ref|ZP_02663941.1| succinyl-CoA ligase [ADP-forming] subunit alpha (Succinyl-CoA synthetase subunit alpha) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240591|ref|ZP_02665523.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264343|ref|ZP_02686316.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467704|ref|ZP_02701541.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820132|ref|ZP_02832132.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446366|ref|YP_002039976.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450796|ref|YP_002044769.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471718|ref|ZP_03077702.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737845|ref|YP_002113845.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251804|ref|YP_002145697.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265743|ref|ZP_03165817.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200390672|ref|ZP_03217283.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929815|ref|ZP_03220836.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|224582554|ref|YP_002636352.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911669|ref|ZP_04655506.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16419249|gb|AAL19683.1| succinyl-CoA synthetase, alpha subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62126946|gb|AAX64649.1| succinyl-CoA synthetase, alpha subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364398|gb|ABX68166.1| hypothetical protein SPAB_02794 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194405029|gb|ACF65251.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194409100|gb|ACF69319.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194458082|gb|EDX46921.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713347|gb|ACF92568.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195629158|gb|EDX48526.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197215507|gb|ACH52904.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243998|gb|EDY26618.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288326|gb|EDY27707.1| succinyl-CoA ligase [ADP-forming] subunit alpha (Succinyl-CoA synthetase subunit alpha) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199603117|gb|EDZ01663.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320809|gb|EDZ06010.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205322550|gb|EDZ10389.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328900|gb|EDZ15664.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334878|gb|EDZ21642.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339881|gb|EDZ26645.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343019|gb|EDZ29783.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347165|gb|EDZ33796.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|224467081|gb|ACN44911.1| succinyl-CoA synthetase alpha subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246002|emb|CBG23804.1| succinyl-CoA synthetase alpha chain [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992477|gb|ACY87362.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157330|emb|CBW16819.1| succinyl-CoA synthetase alpha chain [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911765|dbj|BAJ35739.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085008|emb|CBY94797.1| succinyl-CoA synthetase alpha chain [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226314|gb|EFX51365.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615828|gb|EFY12746.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621224|gb|EFY18081.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623644|gb|EFY20482.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628916|gb|EFY25696.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634896|gb|EFY31626.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636576|gb|EFY33280.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641760|gb|EFY38394.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647817|gb|EFY44297.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651853|gb|EFY48222.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652650|gb|EFY48999.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658458|gb|EFY54721.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664940|gb|EFY61131.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668391|gb|EFY64547.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670521|gb|EFY66654.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675261|gb|EFY71337.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679687|gb|EFY75728.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684837|gb|EFY80836.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322713782|gb|EFZ05353.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129049|gb|ADX16479.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323193155|gb|EFZ78374.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200606|gb|EFZ85681.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202278|gb|EFZ87326.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205455|gb|EFZ90421.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213506|gb|EFZ98299.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215340|gb|EGA00085.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221785|gb|EGA06192.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323228085|gb|EGA12221.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231009|gb|EGA15125.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234158|gb|EGA18247.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238147|gb|EGA22205.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243582|gb|EGA27600.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247394|gb|EGA31353.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251382|gb|EGA35254.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258479|gb|EGA42151.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260633|gb|EGA44242.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264705|gb|EGA48207.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270969|gb|EGA54404.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332987676|gb|AEF06659.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 289 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAII 288 >gi|288819189|ref|YP_003433537.1| succinyl-CoA synthetase alpha subunit [Hydrogenobacter thermophilus TK-6] gi|46849524|dbj|BAD17852.1| succinyl-CoA synthetase small subunit [Hydrogenobacter thermophilus] gi|288788589|dbj|BAI70336.1| succinyl-CoA synthetase alpha subunit [Hydrogenobacter thermophilus TK-6] gi|308752771|gb|ADO46254.1| succinyl-CoA synthetase, alpha subunit [Hydrogenobacter thermophilus TK-6] Length = 293 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 170/299 (56%), Positives = 225/299 (75%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+++TKV+VQG+TGK G+FH Q Y TQVV G+ P KG G +PVF Sbjct: 1 MAILVNRDTKVVVQGITGKEGSFHAAQCKAY-GTQVVAGVTPGKGGQSVEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T AN S+I+VPP+ A DAI+E+++A I LIVCITEG+PV DM+ VK + K+ Sbjct: 56 TVEEAVQETNANCSLIFVPPAFAADAIVEALDAGIELIVCITEGVPVKDMMMVKDYMRKN 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S++LIGPNCPG++TP K+GIMPG +F++GSVGI+SRSGTLTYEA +Q + GLGQS Sbjct: 116 YPSAKLIGPNCPGVITPGEAKVGIMPGHVFKRGSVGIVSRSGTLTYEAAYQLTMVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV G DV+ +F D TE+I+++GEIGG+AEEEAA+++K KKP Sbjct: 176 TAVGIGGDPVHGLSHKDVISMFNEDPETEAILIIGEIGGTAEEEAAEYIKHHV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + ++AG TAPPGR MGHAGA+ISGG+G A+ K+ A++EAG+ + +PA IG+SL ELL Sbjct: 232 VFAYIAGITAPPGRRMGHAGAIISGGRGTAQAKMQALREAGVYVIENPAFIGKSLQELL 290 >gi|315126692|ref|YP_004068695.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding protein [Pseudoalteromonas sp. SM9913] gi|315015206|gb|ADT68544.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding protein [Pseudoalteromonas sp. SM9913] Length = 290 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQALEY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+A I LIVCITEGIP LDMV VK +L+++ Sbjct: 56 TVRDAVEATGATASVIYVPAPFCKDAILEAIDAGIDLIVCITEGIPTLDMVDVKVKLDQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP KIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GTRMIGPNCPGVITPGETKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D+ TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFEKDDQTEAIVMIGEIGGTAEEEAAEYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG++L E G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGKALKEKTG 289 >gi|283833986|ref|ZP_06353727.1| succinyl-CoA synthetase subunit alpha [Citrobacter youngae ATCC 29220] gi|291070120|gb|EFE08229.1| succinyl-CoA synthetase subunit alpha [Citrobacter youngae ATCC 29220] Length = 289 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 173/293 (59%), Positives = 218/293 (74%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEAL 284 >gi|172057899|ref|YP_001814359.1| succinyl-CoA synthetase subunit alpha [Exiguobacterium sibiricum 255-15] gi|171990420|gb|ACB61342.1| succinyl-CoA synthetase, alpha subunit [Exiguobacterium sibiricum 255-15] Length = 304 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI V+++TKV++QG+TG G FH EQ I Y T +VGG+ P KG T G VPVF Sbjct: 1 MSIWVNESTKVIIQGITGNQGMFHGEQMIDY-GTNLVGGVTPGKGGTEVLG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A E+T ANAS+IYVPP+ A DAI+E+ +A I LI+CITEGIPVLDMV+VK L+ Sbjct: 56 TVAQAVEKTGANASIIYVPPAFAADAIMEAADANIALIICITEGIPVLDMVKVKRYLDGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG I G VGI+SRSGTLTYEAV Q + G+GQSTA Sbjct: 116 PVRLIGPNCPGVITPGVAKLGIMPGYIHTPGHVGIVSRSGTLTYEAVHQLTTAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F D T++++M+GEIGG+AEEEAA+++K KP++ Sbjct: 176 VGIGGDPVNGTDFIDTLKAFNEDPETKAVIMLGEIGGTAEEEAAEWVKAN----MTKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI ++ GI +A +PA IG +L+ ++ Sbjct: 232 GFIGGQTAPEGKRMGHAGAIISGGKGTAAEKIKTLRANGIEVAETPAIIGETLIRVI 288 >gi|330813454|ref|YP_004357693.1| succinyl-CoA ligase [ADP-forming] alpha chain [Candidatus Pelagibacter sp. IMCC9063] gi|327486549|gb|AEA80954.1| succinyl-CoA ligase [ADP-forming] alpha chain [Candidatus Pelagibacter sp. IMCC9063] Length = 291 Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 191/293 (65%), Positives = 227/293 (77%), Gaps = 8/293 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T +VGG+ P KG G PVF Sbjct: 1 MSVLINKDTKVICQGFTGTHGTFHSEQAIEY-GTNLVGGVTPNKGGQTHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A+A++IYVP A AIIE+IE E+PLI CITEGIP+LDM++VK +L+ S Sbjct: 56 TVEEAVNQTKADATMIYVPAKFAAAAIIEAIECEMPLIACITEGIPILDMIKVKEKLKGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP+ CKIGIMPG I +KGSVGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRLIGPNCPGIITPEECKIGIMPGHIHKKGSVGIVSRSGTLTYEAVAQTTAIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT FID LELFL DE TESI+M+GEIGG EE+AAQF+KD KKP V Sbjct: 176 IGIGGDPVNGTNFIDCLELFLNDEKTESIIMIGEIGGDDEEQAAQFIKDSK---IKKPTV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 GF+AG TAPPGR MGHAGA+I+GGKGGA+DKI MK GI + SPA IG++L Sbjct: 233 GFIAGLTAPPGRRMGHAGAIIAGGKGGAQDKIEKMKSCGITVTESPADIGKTL 285 >gi|124515901|gb|EAY57410.1| Succinyl-CoA synthetase, alpha subunit [Leptospirillum rubarum] Length = 305 Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 172/304 (56%), Positives = 227/304 (74%), Gaps = 14/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD++T+V+VQG+TGK G++H Y T+VVGG+ P KG T G PV+ Sbjct: 1 MSILVDRSTRVIVQGITGKEGSYHATACREY-GTKVVGGVTPGKGGTTHEG----FPVWN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V +A+E + S+I+VPP+ A DAI+ESI A+IPLIVCITEGIPVLDMVRV+ L+ Sbjct: 56 SVFDAREAENPDVSLIFVPPAFAADAILESIAADIPLIVCITEGIPVLDMVRVRRVLDSR 115 Query: 121 SS-----RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 + RLIGPNCPGI+TPD KIGIMPG I ++G VG++SRSGTLTYEAV+Q +Q GL Sbjct: 116 NEQGKPIRLIGPNCPGIITPDGAKIGIMPGYIHKRGRVGVVSRSGTLTYEAVWQLTQLGL 175 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G+ST VGIGGDPV+G FIDVLE+F +D TE++VM+GEIGG EE+AA F A+ Sbjct: 176 GESTCVGIGGDPVRGLNFIDVLEMFESDPETEAVVMIGEIGGEDEEKAAVF----AQTKM 231 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VGF+AG TAPPGR MGHAGA++SGGKG A DK+ ++ G+ + +P++IG+++ + Sbjct: 232 TKPVVGFIAGLTAPPGRRMGHAGAIVSGGKGTARDKMAFLESHGVRVVDNPSQIGKTVAD 291 Query: 296 LLGS 299 +L S Sbjct: 292 VLAS 295 >gi|209875861|ref|XP_002139373.1| succinyl-CoA synthetase, alpha subunit [Cryptosporidium muris RN66] gi|209554979|gb|EEA05024.1| succinyl-CoA synthetase, alpha subunit, putative [Cryptosporidium muris RN66] Length = 339 Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 171/302 (56%), Positives = 220/302 (72%), Gaps = 7/302 (2%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--GNVNVPVFTT 61 VDKNT+V+ QG+TGK G+FHTEQ ILY TQ+VGG+ P +G W+G ++P+F T Sbjct: 34 FVDKNTRVICQGITGKQGSFHTEQCILY-GTQIVGGVAPNRGGQIWSGSENKFSIPIFNT 92 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK-S 120 + EAK T A A+ IYVPP A AI+++IEAEI +IVCITEGIPV DM+ VK LE Sbjct: 93 LKEAKSVTKATATTIYVPPKNATQAIMDAIEAEIEIIVCITEGIPVHDMIYVKKALEYYK 152 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++ K+GIMP SI + G + I+SRSGTLTYEAV+Q SQ GLGQST Sbjct: 153 KSTLIGPNCPGLIRVGQAKLGIMPASIHKPGEIAIVSRSGTLTYEAVWQVSQCGLGQSTC 212 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL--KDEAKRGR-KK 237 +GIGGD + GT FIDVL FL+DE T+ IV++GEIGG+AEEEAA +L + ++G+ KK Sbjct: 213 IGIGGDSLNGTSFIDVLSNFLSDEQTKGIVLIGEIGGNAEEEAADWLLKNNFDEKGQCKK 272 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 PIV F+AG TAPP R MGHAGA+ISGGKGG KI A++ AG+ + +P+ IG + ++ Sbjct: 273 PIVAFIAGSTAPPNRRMGHAGAIISGGKGGTASKIGALENAGVRVVKNPSAIGYEISTIM 332 Query: 298 GS 299 + Sbjct: 333 SN 334 >gi|198242661|ref|YP_002214707.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197937177|gb|ACH74510.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326622463|gb|EGE28808.1| succinyl-CoA ligase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 289 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASV+YVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVVYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAII 288 >gi|157369513|ref|YP_001477502.1| succinyl-CoA synthetase subunit alpha [Serratia proteamaculans 568] gi|157321277|gb|ABV40374.1| succinyl-CoA synthetase, alpha subunit [Serratia proteamaculans 568] Length = 290 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDTGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEAVKAVL 288 >gi|255660003|ref|ZP_05405412.1| succinyl-CoA synthetase subunit alpha [Mitsuokella multacida DSM 20544] gi|260847756|gb|EEX67763.1| succinyl-CoA synthetase subunit alpha [Mitsuokella multacida DSM 20544] Length = 301 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 170/297 (57%), Positives = 221/297 (74%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M ILV K+TKV+VQG+TGKA FHT+Q I Y T+VVGG+ P KG G VPVF Sbjct: 1 MGILVHKDTKVIVQGITGKAAAFHTQQMIDY-GTKVVGGVTPGKGGQIACG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP A D+I+E+++A++ ++VCI+E IPV DM++V+ +E Sbjct: 56 TVREAVEATGATASVIYVPARFAADSIMEAVDADLDVVVCISEHIPVQDMIKVRRYMEGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPGILT D CK+GI+PG I RKG VG++SRSGTLTYEA FQ + G+GQ+TA Sbjct: 116 KTHLIGPNCPGILTADECKLGIIPGYIHRKGHVGVISRSGTLTYEATFQLTAAGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPVKGT+FID L+LF D T +++M+GEIGG+AEE+AA+++ A KP+ Sbjct: 176 IGIGGDPVKGTDFIDALKLFKEDPETLAVLMIGEIGGTAEEDAAKWI---AANMPDKPVA 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+ APPG+ MGHAGA+ISGGKG A DKI A+ E GI +A + A IG ++V+ L Sbjct: 233 AFIAGRQAPPGKRMGHAGAIISGGKGTAADKIKALHEVGIEVADTVADIGETVVKTL 289 >gi|242008595|ref|XP_002425088.1| succinyl-CoA ligase subunit alpha , putative [Pediculus humanus corporis] gi|212508753|gb|EEB12350.1| succinyl-CoA ligase subunit alpha , putative [Pediculus humanus corporis] Length = 329 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 177/300 (59%), Positives = 225/300 (75%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+ QG TGK GTFH+ QA+ Y TQ+VGG+ P KG ++ PVF + Sbjct: 32 NLKINKDTKVICQGFTGKQGTFHSVQALEY-GTQIVGGVSPGKGGKT----HLEKPVFNS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA + T A ASVIYVPP GA AI+ESIEAE+PLIVCITEGIP DMV+VK +L ++ Sbjct: 87 VKEAMQATGATASVIYVPPPGAAKAILESIEAEMPLIVCITEGIPQSDMVKVKHQLLRQN 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ D CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+Q GLGQ+ Sbjct: 147 KSRLIGPNCPGIIASDECKIGIMPGHIHKKGCVGIVSRSGTLTYEAVHQTTQVGLGQTLC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE F+ D T+ I+++GEIGG AEE+AA++L + KP+V Sbjct: 207 VGIGGDPFNGTDFIDCLECFIKDPDTKGIILIGEIGGVAEEQAAEYLTKHNYGIKAKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA+DKI A++ AG+ + SPA++G L + + L Sbjct: 267 SFIAGLSAPPGRRMGHAGAIISGGKGGAQDKIKALESAGVIVTKSPAKMGSELFKEMKRL 326 >gi|284097281|ref|ZP_06385421.1| succinyl-CoA synthetase, alpha subunit [Candidatus Poribacteria sp. WGA-A3] gi|283831205|gb|EFC35175.1| succinyl-CoA synthetase, alpha subunit [Candidatus Poribacteria sp. WGA-A3] Length = 290 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 174/299 (58%), Positives = 221/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+T+V+VQG+TGK G+FH Q Y TQVV G+ P K G +PVF Sbjct: 1 MSILVNKSTRVVVQGITGKEGSFHATQCQAY-GTQVVAGVTPGKAGQEVEG----IPVFH 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A S+I+VPP A DAI+E+ A I L+VCITEGIPV DMVRVK L + Sbjct: 56 TVRDAVKETEATTSLIFVPPPFAADAILEAANAGIWLVVCITEGIPVNDMVRVKRALAST 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+T D CKIGIMPG I RKG VG++SRSGTLTYEAV Q + GLG++T Sbjct: 116 QTRLIGPNCPGIITADECKIGIMPGFIHRKGKVGVISRSGTLTYEAVNQLTNLGLGETTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT +ID+L++F DE T+++VM+GEIGG AEE+AA F+K E KP+V Sbjct: 176 VGIGGDPIIGTGYIDLLQMFEHDEETKAVVMIGEIGGDAEEKAAAFIKRE----MTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+I+GG+G A+DKI A++ AG+ + +PA IG ++ LGS Sbjct: 232 GFIAGMTAPPGRRMGHAGAIITGGQGTAKDKIAALEAAGVQVVRNPAEIGETVKAALGS 290 >gi|317491189|ref|ZP_07949625.1| succinate-CoA ligase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920736|gb|EFV42059.1| succinate-CoA ligase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 289 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGSQGTFHSEQALAY-GTKLVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VKA+LE+S Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIICITEGIPTLDMLVVKAKLEQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQS+ Sbjct: 116 DARMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDIGFGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE IVM+GEIGG+AEE+AA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEVIVMIGEIGGNAEEDAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLAEIGNAVKTVL 288 >gi|253699671|ref|YP_003020860.1| succinyl-CoA synthetase, subunit alpha [Geobacter sp. M21] gi|251774521|gb|ACT17102.1| succinyl-CoA synthetase, alpha subunit [Geobacter sp. M21] Length = 290 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 167/297 (56%), Positives = 219/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI+++K+T+V+ QG+TG G FH + A Y TQ+VGG+ P KG T G PVF Sbjct: 1 MSIMINKDTRVITQGITGATGLFHAQGAREY-GTQMVGGVTPGKGGTVIDG----FPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A ASVIYVPP A D+I+E+++A + L+ CITEGIPVLDMV+VK L Sbjct: 56 TVAEAVHETGATASVIYVPPPFAADSIMEAVDAGVELVCCITEGIPVLDMVKVKQYLVGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CKIGIMPG I + G +G++SRSGTLTYEAV+Q + GLGQST Sbjct: 116 RTRLVGPNCPGVITPGQCKIGIMPGYIHKPGRIGVVSRSGTLTYEAVWQLTSIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L LF AD T++++M+GEIGG+AEEEAA F+K+ KKP+ Sbjct: 176 VGIGGDPVNGTSHIDCLRLFEADPDTDAVIMIGEIGGNAEEEAAHFVKEN----MKKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAPPG+ MGHAGA+ISGGKG A +K+ ++E GI +A SPA + ++L+++ Sbjct: 232 AYIAGVTAPPGKRMGHAGAIISGGKGTATEKVAVLRECGISVADSPAEMAQALLQVY 288 >gi|325578256|ref|ZP_08148391.1| succinyl-CoA synthetase subunit alpha [Haemophilus parainfluenzae ATCC 33392] gi|325159992|gb|EGC72121.1| succinyl-CoA synthetase subunit alpha [Haemophilus parainfluenzae ATCC 33392] Length = 289 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 174/297 (58%), Positives = 218/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K TKV+ QG TG GTFH+EQA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MAILINKETKVICQGFTGAQGTFHSEQALAY-GTKLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A A++IYVP DAI+E+I+A I L+VCITEGIP LDM+ VK +L ++ Sbjct: 56 TVREAVQVTGATATMIYVPAPFCKDAILEAIDAGIQLVVCITEGIPTLDMLLVKQKLIET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMPG+I +KG VGI+SRSGTLTYE V QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPGNIHKKGRVGIVSRSGTLTYEVVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+ F D TE+IVM+GEIGGSAEEEAA F+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKRFQEDPETEAIVMIGEIGGSAEEEAAAFITAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG A DKI A++ AG+ S A IG +L ELL Sbjct: 232 AYIAGVTAPKGKRMGHAGAIISGGKGTAADKIAALEAAGVKTVRSLAEIGSALHELL 288 >gi|326437952|gb|EGD83522.1| succinyl-CoA ligase subunit alpha [Salpingoeca sp. ATCC 50818] Length = 322 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 176/290 (60%), Positives = 224/290 (77%), Gaps = 6/290 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L++K+TKV+ QG TG+ GTFH+E AI Y T++VGG+ PKK G +PVF + Sbjct: 27 NLLINKDTKVICQGFTGRQGTFHSEAAIEY-GTRMVGGVSPKKAGQEHLG----LPVFGS 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 V EAK T A+A+V+YVPP GA A++E++EAE+PLIVCITEGIP DMVRVK A L++ Sbjct: 82 VEEAKRETNADATVVYVPPPGAAAAVLEAMEAEVPLIVCITEGIPQQDMVRVKHALLQQD 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P CKIGIMPG I G++G++SRSGTLTYEAV QT+ GLGQS Sbjct: 142 KSRLVGPNCPGIIKPGECKIGIMPGHIHTPGNIGVVSRSGTLTYEAVGQTTTVGLGQSLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID L++FL D T I+M+GEIGGSAEEEAA+FLK +KP+V Sbjct: 202 VGIGGDPFNGTDFIDCLDVFLKDPDTHGIIMIGEIGGSAEEEAAEFLKQNNSGPNRKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 F+AG TAPPGR MGHAGA+ISGGKGGA +KI A+++AG+ +A SPA++G Sbjct: 262 SFIAGLTAPPGRRMGHAGAIISGGKGGAAEKIAALEDAGVIVAKSPAQMG 311 >gi|261868410|ref|YP_003256332.1| hypothetical protein D11S_1750 [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413742|gb|ACX83113.1| hypothetical protein D11S_1750 [Aggregatibacter actinomycetemcomitans D11S-1] Length = 290 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 217/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NTKV+ QG TG GTFH++QA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDNNTKVICQGFTGGQGTFHSQQALAY-GTKLVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A A+VIYVP G DAI+E+I+A I LIVCITEGIP LDM+ VK RL ++ Sbjct: 56 TVRDAVEATGATATVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMLVVKQRLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPEECKIGIMPGDIHKKGKIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ + F+D+L+LF D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPCSNFVDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAFIKQHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP + MGHAGA+ISGGKG A+ K A++ AG+ S IG L ++L Sbjct: 232 SYIAGVTAPKDKRMGHAGAIISGGKGTADAKFVALEAAGVKTVRSLVGIGAVLRDVL 288 >gi|270263775|ref|ZP_06192044.1| hypothetical protein SOD_e04050 [Serratia odorifera 4Rx13] gi|270042659|gb|EFA15754.1| hypothetical protein SOD_e04050 [Serratia odorifera 4Rx13] Length = 290 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 174/297 (58%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTQHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDTGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEAVKAVL 288 >gi|145479775|ref|XP_001425910.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124392982|emb|CAK58512.1| unnamed protein product [Paramecium tetraurelia] Length = 312 Score = 333 bits (853), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 223/297 (75%), Gaps = 10/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFTT 61 + V+K+TKV+ QG+TG GTF TEQA+ Y T++VGG+ PKK GST+ + +PVF Sbjct: 18 VWVNKHTKVICQGITGNQGTFQTEQALNYF-TKMVGGVSPKKAGSTH-----LGLPVFKN 71 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 EAK+ T +ASVIYVPP A AIIE+IEA+I L+V IT+GIP DM++VK L S Sbjct: 72 CQEAKQNTGCDASVIYVPPPTAASAIIEAIEAQIGLVVVITDGIPQHDMIKVKHALRSQS 131 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPGI+ P+ CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQST Sbjct: 132 VTRVIGPNCPGIIKPNECKIGIMPGYIHQNGKIGIVSRSGTLTYEAVDQTTRAGLGQSTV 191 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FIDVLE F+ D TE IVM+GEIGG EE AA+++K + KP+V Sbjct: 192 VGIGGDPFNGTNFIDVLERFMVDPETEGIVMIGEIGGENEEMAAEWIKQNNP--KNKPVV 249 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPP R MGHAGA++S GKG A +KI A+++AGI + SPA+IG++++E++ Sbjct: 250 GFIAGITAPPERRMGHAGAIVSKGKGSAPEKIRALEQAGIRVVKSPAQIGKTMLEVM 306 >gi|237730692|ref|ZP_04561173.1| succinyl-CoA synthetase subunit alpha [Citrobacter sp. 30_2] gi|226906231|gb|EEH92149.1| succinyl-CoA synthetase subunit alpha [Citrobacter sp. 30_2] Length = 289 Score = 333 bits (853), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 172/293 (58%), Positives = 218/293 (74%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEAL 284 >gi|225711092|gb|ACO11392.1| Succinyl-CoA ligase subunit alpha, mitochondrial precursor [Caligus rogercresseyi] Length = 327 Score = 333 bits (853), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 176/297 (59%), Positives = 228/297 (76%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++++ K++KV+ QG TGK GTFH++QAI Y T +VGG+ PKK T G +PVF + Sbjct: 30 NMMLTKDSKVICQGFTGKQGTFHSQQAIDY-GTNMVGGVSPKKAGTTHLG----LPVFGS 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA +T A+A+VIYVPP GA AI+E++EAEI LIVCITEGIP DMVRVK L K S Sbjct: 85 VKEAVAKTKADATVIYVPPPGAAAAILEAMEAEIGLIVCITEGIPQQDMVRVKDALNKQS 144 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT+Q GLGQ+ Sbjct: 145 KSRLIGPNCPGIIAPNKCKIGIMPGHIHQEGCIGVVSRSGTLTYEAVHQTTQVGLGQTLC 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+M+GEIGG+AEE+AA++L++ KP+V Sbjct: 205 VGIGGDPFNGTNFIDCLDIFLQDPKTKGIIMIGEIGGAAEEKAAEYLQEHNSGPNMKPVV 264 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+I GGKG A+ KI A++ AG+ + PSPA++G +LV+L+ Sbjct: 265 SFIAGVTAPPGRRMGHAGAIIFGGKGTAQTKIAALEAAGVAVTPSPAQMGTTLVKLM 321 >gi|188534428|ref|YP_001908225.1| Succinyl-CoA synthetase, alpha subunit [Erwinia tasmaniensis Et1/99] gi|188029470|emb|CAO97347.1| Succinyl-CoA synthetase, alpha subunit [Erwinia tasmaniensis Et1/99] Length = 290 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D I+E+IEA I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDGILEAIEAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP +CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGACKIGIMPGHIHQPGRIGIVSRSGTLTYEAVKQTTDIGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQDDPQTEAIVMIGEIGGSAEEEAAAFIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEAVKAVL 288 >gi|161504111|ref|YP_001571223.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865458|gb|ABX22081.1| hypothetical protein SARI_02209 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 289 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVDATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAII 288 >gi|293397231|ref|ZP_06641504.1| succinyl-CoA synthetase subunit alpha [Serratia odorifera DSM 4582] gi|291420251|gb|EFE93507.1| succinyl-CoA synthetase subunit alpha [Serratia odorifera DSM 4582] Length = 290 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 174/297 (58%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVETTGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVL 288 >gi|157146663|ref|YP_001453982.1| succinyl-CoA synthetase subunit alpha [Citrobacter koseri ATCC BAA-895] gi|157083868|gb|ABV13546.1| hypothetical protein CKO_02429 [Citrobacter koseri ATCC BAA-895] Length = 289 Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 219/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+++A I LI+ ITEGIP LDM+ VK L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAVDAGIKLIITITEGIPTLDMLTVKVALDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAVM 288 >gi|148266358|ref|YP_001233064.1| succinyl-CoA synthetase, alpha subunit [Geobacter uraniireducens Rf4] gi|146399858|gb|ABQ28491.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Geobacter uraniireducens Rf4] Length = 291 Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 167/297 (56%), Positives = 219/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV K TKV+ QG+TG G FH + A Y TQ+VGG+ P KG T G PVF Sbjct: 1 MAILVHKATKVITQGITGATGLFHAQGAREY-GTQMVGGVTPGKGGTNIDG----FPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA +T A ASVIYVPP A D+I+E+++A I ++ CITEGIPVLDMV+VK ++ Sbjct: 56 TVAEAVAKTGATASVIYVPPPFAADSIMEAVDAGIEMVCCITEGIPVLDMVKVKQYMQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I + G VG++SRSGTLTYEAV+Q + GLGQST Sbjct: 116 KTRLIGPNCPGVITPGQCKIGIMPGYIHKPGKVGVVSRSGTLTYEAVWQLTGYGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT +D L++F D TE+++M+GEIGG+AEEEAA F++D KP+ Sbjct: 176 VGIGGDPVNGTSHLDCLKMFEEDPETEAVIMIGEIGGNAEEEAAYFVRDH----MTKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG+TAPPG+ MGHAGA+ISGGKG A +K+ ++E GI +A SPA + ++L+++ Sbjct: 232 AYIAGRTAPPGKRMGHAGAIISGGKGTAAEKVAVLEECGISVAASPAEMAQALLKIY 288 >gi|300715881|ref|YP_003740684.1| succinyl-CoA synthetase, alpha subunit [Erwinia billingiae Eb661] gi|299061717|emb|CAX58833.1| Succinyl-CoA synthetase, alpha subunit [Erwinia billingiae Eb661] Length = 290 Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D I+E+IEA I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDGILEAIEAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP +CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGACKIGIMPGHIHQPGRIGIVSRSGTLTYEAVKQTTDIGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAFIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVL 288 >gi|149911918|ref|ZP_01900517.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Moritella sp. PE36] gi|149805011|gb|EDM65039.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Moritella sp. PE36] Length = 289 Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQA Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAADY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+A I LIVCITEGIP +DM+ VK +L++ Sbjct: 56 TVRDAVETTGATASVIYVPAPFCKDAILEAIDAGIELIVCITEGIPTVDMIEVKVKLDQQ 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + R+IGPNCPG++TP KIGIMPG I + G +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 NVRMIGPNCPGVITPGESKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTDEGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FID+LELF D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDILELFENDPQTEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A+++AG+ S A IG +L LG Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTADEKFAALEDAGVSTVRSLADIGSALRAKLG 289 >gi|117618581|ref|YP_856461.1| succinyl-CoA synthetase alpha chain [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559988|gb|ABK36936.1| succinyl-CoA synthetase alpha chain [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 290 Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 173/298 (58%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+A I LIV ITEGIP LDM+ VK +L+++ Sbjct: 56 TVRDAVEATGATASVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTLDMLDVKVKLQET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGG+AEE+AA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFQNDPQTEAIVMIGEIGGNAEEDAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A +K A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAAEKFAALEDAGVKTVRSLADIGKALREVTG 289 >gi|56707642|ref|YP_169538.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|110670113|ref|YP_666670.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. tularensis FSC198] gi|118497192|ref|YP_898242.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. novicida U112] gi|134302425|ref|YP_001122395.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. tularensis WY96-3418] gi|187932030|ref|YP_001892015.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Francisella tularensis subsp. mediasiatica FSC147] gi|194323491|ref|ZP_03057268.1| succinyl-CoA synthetase, alpha subunit family [Francisella tularensis subsp. novicida FTE] gi|208778984|ref|ZP_03246330.1| succinyl-CoA synthetase, alpha subunit family [Francisella novicida FTG] gi|224456712|ref|ZP_03665185.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Francisella tularensis subsp. tularensis MA00-2987] gi|254370157|ref|ZP_04986163.1| succinate-CoA ligase [Francisella tularensis subsp. tularensis FSC033] gi|254372557|ref|ZP_04988046.1| hypothetical protein FTCG_00120 [Francisella tularensis subsp. novicida GA99-3549] gi|254874459|ref|ZP_05247169.1| succinyl-CoA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|56604134|emb|CAG45136.1| Succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|110320446|emb|CAL08519.1| Succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. tularensis FSC198] gi|118423098|gb|ABK89488.1| succinyl-CoA synthetase, alpha subunit [Francisella novicida U112] gi|134050202|gb|ABO47273.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. tularensis WY96-3418] gi|151568401|gb|EDN34055.1| succinate-CoA ligase [Francisella tularensis subsp. tularensis FSC033] gi|151570284|gb|EDN35938.1| hypothetical protein FTCG_00120 [Francisella novicida GA99-3549] gi|187712939|gb|ACD31236.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Francisella tularensis subsp. mediasiatica FSC147] gi|194322346|gb|EDX19827.1| succinyl-CoA synthetase, alpha subunit family [Francisella tularensis subsp. novicida FTE] gi|208744784|gb|EDZ91082.1| succinyl-CoA synthetase, alpha subunit family [Francisella novicida FTG] gi|254840458|gb|EET18894.1| succinyl-CoA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158800|gb|ADA78191.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. tularensis NE061598] gi|328675716|gb|AEB28391.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Francisella cf. novicida 3523] gi|328676664|gb|AEB27534.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Francisella cf. novicida Fx1] Length = 290 Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 173/298 (58%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKVLVQG TGK GTFH+EQAI Y T +VGG+ P KG T +++ PVF Sbjct: 1 MSVLVDKNTKVLVQGFTGKNGTFHSEQAIAY-GTNIVGGVTPGKGGTT----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA T A+ASVIYVP D+ IE+I++ + L+V ITEG+P LDM+ VK L+ Sbjct: 56 TMAEAVAATGADASVIYVPAPFVKDSAIEAIDSGVKLVVIITEGVPTLDMLVVKEYLKDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPGI+TP CKIGIMPG I KG VGI+SRSGTLTYEAV QT++ G GQST Sbjct: 116 DVRVIGPNCPGIITPGECKIGIMPGHIHMKGKVGIISRSGTLTYEAVAQTTKLGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G I+ L+L D TE+I+++GEIGG+AEEEAA+++K KP++ Sbjct: 176 IGIGGDPIPGMNQIEALKLLENDPQTEAIILIGEIGGTAEEEAAEYIKHNV----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAPPG+ MGHAGA+ISGGKG AE+K A + AGI SPA IG+ L E+ G Sbjct: 232 GYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAAFEAAGIAYTRSPAEIGKKLKEVTG 289 >gi|149374982|ref|ZP_01892755.1| succinyl-CoA synthetase, alpha subunit [Marinobacter algicola DG893] gi|149360871|gb|EDM49322.1| succinyl-CoA synthetase, alpha subunit [Marinobacter algicola DG893] Length = 290 Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 172/298 (57%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGAQGTFHSEQAIEY-GTKMVGGVSPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A A+VIYVP DAI+E+ +A I LIVCITEGIP +DM+ K +++ Sbjct: 56 TVREAVEKTGAEATVIYVPAPFCKDAIVEAADAGIQLIVCITEGIPTIDMLYAKEYVDRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG+I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGNIHKPGKVGIVSRSGTLTYEAVKQTTDFGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+L D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILQLLQDDPQTEAIVMIGEIGGTAEEEAAAFIKENV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+ +AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALNDAGVKTVRSLAEIGKALKEVTG 289 >gi|16759678|ref|NP_455295.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142549|ref|NP_805891.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213051756|ref|ZP_03344634.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425387|ref|ZP_03358137.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213579891|ref|ZP_03361717.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|289824374|ref|ZP_06543967.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25293455|pir||AG0591 succinyl-CoA synthetase alpha chain [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501971|emb|CAD05201.1| succinyl-CoA synthetase alpha chain [Salmonella enterica subsp. enterica serovar Typhi] gi|29138180|gb|AAO69751.1| succinyl-CoA synthetase alpha chain [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 289 Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 219/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T V+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTNVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAII 288 >gi|124487928|gb|ABN12047.1| putative succinate-CoA ligase, GDP-forming, alpha subunit [Maconellicoccus hirsutus] Length = 286 Score = 332 bits (851), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 174/285 (61%), Positives = 223/285 (78%), Gaps = 6/285 (2%) Query: 14 QGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANA 73 QG TGK GTFH++QA+ Y T+VVGG+ P KG ++++PVF +V EAK+ T A+A Sbjct: 1 QGFTGKQGTFHSKQALEY-GTKVVGGVSPGKGGK----SHLDLPVFNSVREAKDATGADA 55 Query: 74 SVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSRLIGPNCPGI 132 +VIYVPP GA AIIE++EAE+PLIVCITEGIP DMV+VK L ++ SRLIGPNCPGI Sbjct: 56 TVIYVPPGGAAKAIIEAVEAEMPLIVCITEGIPQQDMVKVKHVLVRQNKSRLIGPNCPGI 115 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 + PD CKIGIMPG + +KG +GI+SRSGTLTYEAV QT+Q GLGQ+ VGIGGDP GT+ Sbjct: 116 IAPDQCKIGIMPGHVHQKGIIGIVSRSGTLTYEAVHQTTQVGLGQTLCVGIGGDPFNGTD 175 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 FID LE+FL D T+ I+++GEIGG AEE AA++L KP+V F+AG TAPPGR Sbjct: 176 FIDCLEVFLKDPETKGIILIGEIGGVAEENAAEYLIQNNSGPNAKPVVSFIAGLTAPPGR 235 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 MGHAGA+ISGGKGGA+DKINA+++AG+ ++ SPA++G L++L+ Sbjct: 236 RMGHAGAIISGGKGGAQDKINALEKAGVVVSRSPAQMGNELLKLM 280 >gi|170769129|ref|ZP_02903582.1| succinate-CoA ligase, alpha subunit [Escherichia albertii TW07627] gi|170122201|gb|EDS91132.1| succinate-CoA ligase, alpha subunit [Escherichia albertii TW07627] Length = 289 Score = 332 bits (851), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 174/297 (58%), Positives = 218/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I R G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHRPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 288 >gi|218692341|ref|YP_002400553.1| Succinyl-CoA synthetase subunit alpha (SCS-alpha) [Escherichia coli ED1a] gi|218429905|emb|CAR10879.2| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Escherichia coli ED1a] Length = 290 Score = 332 bits (851), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 169/298 (56%), Positives = 221/298 (74%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+VLVQG+TGK GTFHTEQAI Y TQ+VGG+ P KG +++ PVF Sbjct: 1 MSVLINKHTRVLVQGITGKNGTFHTEQAIAY-GTQIVGGVTPGKGGQR----HLDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 ++ EA +T A+ASVIYVP D+++E+IEA + L+V ITEG+P LDMV+V+ L+ Sbjct: 56 SMKEAMRQTEADASVIYVPAPFVLDSVVEAIEAGVKLVVVITEGVPTLDMVKVRRLLDCH 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++TP CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PDVRLIGPNCPGVITPGECKIGIMPGEIHRPGRIGIVSRSGTLTYEAVAQTTALGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FID L LF D T++++M+GEIGG+AEE AA+F++DE KP+ Sbjct: 176 CIGIGGDPVPGTNFIDALRLFENDPQTDAVIMIGEIGGNAEERAAEFIRDEM----NKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VG++AG TAP G+ MGHAGA+ISGG G AEDK A +AG+ +PA +G +L ++ Sbjct: 232 VGYIAGVTAPKGKRMGHAGAIISGGSGSAEDKFRAFDKAGMAWTRNPALLGETLWNVI 289 >gi|284007865|emb|CBA73775.1| succinyl-CoA synthetase alpha chain [Arsenophonus nasoniae] Length = 291 Score = 332 bits (851), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 174/299 (58%), Positives = 221/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+I + I LI+ ITEGIP LDM+ VKA+L+++ Sbjct: 56 TVREAVKATGATASVIYVPARFCKDSILEAINSGIKLIITITEGIPTLDMLIVKAKLDET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPGI+TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGIITPGECKIGIQPGHIHKAGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF AD TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQADPQTEAIVMIGEIGGTAEEEAAAYIKQHI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L+ S Sbjct: 232 AYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLAEIGAAVKQLVTS 290 >gi|322417829|ref|YP_004197052.1| succinyl-CoA synthetase subunit alpha [Geobacter sp. M18] gi|320124216|gb|ADW11776.1| succinyl-CoA synthetase, alpha subunit [Geobacter sp. M18] Length = 296 Score = 332 bits (851), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 165/293 (56%), Positives = 217/293 (74%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+++++VQG+TG++G FHT+Q Y + VV G+ P KG + G +PVF Sbjct: 1 MSILINKSSRIVVQGITGRSGLFHTQQCRAY-GSNVVAGVTPGKGGIHIEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T AN S+I+VPP GA DAI+E++ A + L VCITEGIPV DMV VKA L++S Sbjct: 56 TVAEAVRYTDANVSMIFVPPPGAADAILEAVAAGLELAVCITEGIPVRDMVPVKAVLQQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP CKIGIMPG I + G +G++SRSGTLTYEAV Q S LGQST Sbjct: 116 KMRLVGPNCPGVITPGECKIGIMPGHIHKPGKIGVVSRSGTLTYEAVKQLSDMELGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G FIDVL+LF D TE + M+GEIGGSAEE+AA ++++ +KP+ Sbjct: 176 VGIGGDPIIGMNFIDVLKLFNDDPGTEGVFMIGEIGGSAEEDAAHWIREN----MRKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG TAPPG+ MGHAGA+I+GGKG AEDKI + E G+ +A SP ++G ++ Sbjct: 232 AFIAGVTAPPGKRMGHAGAIITGGKGKAEDKIRTLDECGVVVASSPTKMGEAM 284 >gi|197119590|ref|YP_002140017.1| succinyl-CoA synthetase subunit alpha [Geobacter bemidjiensis Bem] gi|197088950|gb|ACH40221.1| succinyl-CoA synthetase, alpha subunit [Geobacter bemidjiensis Bem] Length = 290 Score = 332 bits (851), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 167/297 (56%), Positives = 219/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI+++K T+V+ QG+TG G FH + A Y TQ+VGG+ P KG T G PVF Sbjct: 1 MSIMINKETRVITQGITGATGLFHAQGAREY-GTQMVGGVTPGKGGTVIDG----FPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A ASVIYVPP A D+I+E+++A + L+ CITEGIPVLDMV+VK L Sbjct: 56 TVAEAVHETGATASVIYVPPPFAADSIMEAVDAGVELVCCITEGIPVLDMVKVKQYLVGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CKIGIMPG I + G +G++SRSGTLTYEAV+Q + GLGQST Sbjct: 116 RTRLVGPNCPGVITPGQCKIGIMPGYIHKPGRIGVVSRSGTLTYEAVWQLTSIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L LF AD T++++M+GEIGG+AEEEAA+F+K+ KKP+ Sbjct: 176 VGIGGDPVNGTSHIDCLRLFEADPDTDAVIMIGEIGGNAEEEAARFVKEN----MKKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAPPG+ MGHAGA+ISGGKG A +K+ ++E GI +A SPA + ++L+++ Sbjct: 232 AYIAGVTAPPGKRMGHAGAIISGGKGTATEKVAVLRECGISVADSPAEMAQALLQVY 288 >gi|330720907|gb|EGG99089.1| Succinyl-CoA ligase [ADP-forming] alpha chain [gamma proteobacterium IMCC2047] Length = 291 Score = 332 bits (851), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 173/298 (58%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QGLTG G+FHTEQA L C TQVV G+ P KG G +PVF Sbjct: 1 MSILIDKNTKVICQGLTGAQGSFHTEQA-LACGTQVVAGVVPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAKE T A ASV+YVP + D+I+E+ A I LIVCITEGIP LDM+ VK + ++ Sbjct: 56 SVKEAKEVTGATASVLYVPAAFCKDSILEAANAGIELIVCITEGIPTLDMLYVKEKCDQL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP CKIGIMP SI G VG++SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLVGPNCPGVITPGECKIGIMPASIHLPGKVGVVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L LF AD TE+IVM+GEIGG+AEEEAA +++D KP+V Sbjct: 176 VGIGGDPIPGSHFIDILALFEADPKTEAIVMIGEIGGTAEEEAAAYIRDHV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG AP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L E+ G Sbjct: 232 SYIAGVAAPAGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLACIGEALAEITG 289 >gi|332992991|gb|AEF03046.1| Succinyl-CoA synthetase subunit alpha [Alteromonas sp. SN2] Length = 290 Score = 332 bits (851), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 172/298 (57%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP + D+I+E+ +A I LIVCITEGIP LDM+ VK + Sbjct: 56 TVREAVEATGATATVIYVPAAFCKDSIVEAADAGIELIVCITEGIPTLDMLYVKEYVNAK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQS+ Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA+F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILQLFQDDPQTEAIVMIGEIGGTAEEEAAEFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A+++AG+ S A IG++L E G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTADEKFKALEDAGVKTVRSLAEIGKALRETTG 289 >gi|53804667|ref|YP_113447.1| succinyl-CoA synthase subunit alpha [Methylococcus capsulatus str. Bath] gi|53758428|gb|AAU92719.1| succinyl-CoA synthase, alpha subunit [Methylococcus capsulatus str. Bath] Length = 290 Score = 332 bits (851), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 176/297 (59%), Positives = 225/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ K+T+V+ QG TGK TFH+ Q + Y TQ+VGG+ P KG + ++++PVF Sbjct: 1 MSILIGKDTRVICQGFTGKQATFHSRQCLDY-GTQLVGGVTPGKGGSR----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T ANAS+IYVPP A DAI+E+ +A I +IVCITEGIPVL M++VKA L Sbjct: 56 TVREAVAATGANASMIYVPPPFAADAILEAADAGISVIVCITEGIPVLHMLKVKAALASY 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPGI+TPD CKIGIMPG I RKGS+GI+SRSGTLTYEAV+QT++ GLGQST Sbjct: 116 DAVLIGPNCPGIITPDECKIGIMPGFIHRKGSIGIVSRSGTLTYEAVYQTTRVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KG +FIDVL +F D T I+MVGEIGGSAEE+AA+F++ KP+V Sbjct: 176 VGIGGDPIKGLDFIDVLGMFEEDPDTAGIIMVGEIGGSAEEDAAEFIQAHV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAPPG+ MGHAGA+I+GGKG K+ AM+ AG+ + S + +GR ++ELL Sbjct: 232 GYIAGLTAPPGKRMGHAGAIITGGKGTGAGKVEAMRRAGVEMVDSLSDMGRRMLELL 288 >gi|207856183|ref|YP_002242834.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206707986|emb|CAR32275.1| succinyl-CoA synthetase alpha chain [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 289 Score = 332 bits (851), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAII 288 >gi|15596786|ref|NP_250280.1| succinyl-CoA synthetase subunit alpha [Pseudomonas aeruginosa PAO1] gi|107101022|ref|ZP_01364940.1| hypothetical protein PaerPA_01002052 [Pseudomonas aeruginosa PACS2] gi|116049534|ref|YP_791662.1| succinyl-CoA synthetase subunit alpha [Pseudomonas aeruginosa UCBPP-PA14] gi|152988843|ref|YP_001349039.1| succinyl-CoA synthetase subunit alpha [Pseudomonas aeruginosa PA7] gi|218892454|ref|YP_002441321.1| succinyl-CoA synthetase subunit alpha [Pseudomonas aeruginosa LESB58] gi|254234689|ref|ZP_04928012.1| succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa C3719] gi|254239936|ref|ZP_04933258.1| succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa 2192] gi|296390036|ref|ZP_06879511.1| succinyl-CoA synthetase subunit alpha [Pseudomonas aeruginosa PAb1] gi|313106603|ref|ZP_07792829.1| succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa 39016] gi|12230978|sp|Q51567|SUCD_PSEAE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|9947553|gb|AAG04978.1|AE004587_2 succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa PAO1] gi|115584755|gb|ABJ10770.1| succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa UCBPP-PA14] gi|126166620|gb|EAZ52131.1| succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa C3719] gi|126193314|gb|EAZ57377.1| succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa 2192] gi|150964001|gb|ABR86026.1| succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa PA7] gi|218772680|emb|CAW28465.1| succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa LESB58] gi|310879331|gb|EFQ37925.1| succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa 39016] Length = 295 Score = 332 bits (851), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 175/298 (58%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+ I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKEAVEATGAEASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|95928578|ref|ZP_01311325.1| succinyl-CoA synthetase, alpha subunit [Desulfuromonas acetoxidans DSM 684] gi|95135368|gb|EAT17020.1| succinyl-CoA synthetase, alpha subunit [Desulfuromonas acetoxidans DSM 684] Length = 292 Score = 332 bits (850), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 165/298 (55%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+VQG+TGK G FHT + Y T +V G+ P KG + G +PVF Sbjct: 1 MSILINKDTKVIVQGMTGKTGMFHTRECRDY-GTNIVAGVTPGKGGIHVEG----IPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T N S+I+VPP GA DAI+E+ EA + L+VCITEG+PV DMV + +E S Sbjct: 56 TMEEAVRITGGNVSMIFVPPPGAADAILEACEAGVDLVVCITEGVPVRDMVMARQVVEDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++L+GPNCPG++TP +CKIGIMPG I + G +G++SRSGTLTYEAV Q + GLGQST Sbjct: 116 PTKLVGPNCPGLITPGACKIGIMPGYIHKPGKIGVVSRSGTLTYEAVKQLTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G +FIDVLE+F D TE ++M+GEIGGSAEE+AAQ++++ KP+ Sbjct: 176 VGIGGDPIIGLKFIDVLEMFNNDPETEGVLMIGEIGGSAEEDAAQWVQEH----MTKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG+TAPPG+ MGHAGA+ISGGKG AEDKI A+ E G+ ++ SP +G+++++ LG Sbjct: 232 AFIAGQTAPPGKRMGHAGAIISGGKGRAEDKIAALTECGVTVSTSPTGMGQAMLKALG 289 >gi|311280397|ref|YP_003942628.1| succinyl-CoA synthetase, alpha subunit [Enterobacter cloacae SCF1] gi|308749592|gb|ADO49344.1| succinyl-CoA synthetase, alpha subunit [Enterobacter cloacae SCF1] Length = 289 Score = 332 bits (850), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 219/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKSII 288 >gi|146307522|ref|YP_001187987.1| succinyl-CoA synthetase subunit alpha [Pseudomonas mendocina ymp] gi|145575723|gb|ABP85255.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Pseudomonas mendocina ymp] Length = 295 Score = 332 bits (850), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG + G +PVF Sbjct: 1 MSILINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGSTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVEATGAEASVIYVPAPFCKDSILEAANGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|157148043|ref|YP_001455362.1| hypothetical protein CKO_03850 [Citrobacter koseri ATCC BAA-895] gi|157085248|gb|ABV14926.1| hypothetical protein CKO_03850 [Citrobacter koseri ATCC BAA-895] Length = 290 Score = 332 bits (850), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 169/294 (57%), Positives = 218/294 (74%), Gaps = 10/294 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DK T+VLVQG+TGK GTFHTEQAI Y TQ+VGGI P KG +++ PVF Sbjct: 1 MSVLIDKYTRVLVQGITGKNGTFHTEQAIAY-GTQIVGGITPGKGGQR----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 ++ EA +T A+ASVIYVP D+++E++EA + LIV ITEG+P LDMV+V+ L+ Sbjct: 56 SMKEAMRQTQADASVIYVPAPFVLDSVVEAVEAGVKLIVVITEGVPTLDMVKVRRLLDCH 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPGI+TP +CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PEVRLIGPNCPGIITPGACKIGIMPGDIHRPGRIGIISRSGTLTYEAVAQTTALGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT FID L LF D T++++M+GEIGG+AEE AA+F++ E KP+ Sbjct: 176 CIGIGGDPIPGTNFIDALRLFADDPQTDAVIMIGEIGGNAEEHAAEFIRHEM----NKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 +G++AG TAP G+ MGHAGA+ISG G AEDK A +AG+ +PA+IG +L Sbjct: 232 IGYIAGVTAPKGKRMGHAGAIISGSSGSAEDKFRAFDKAGMTWTRNPAQIGETL 285 >gi|320529608|ref|ZP_08030688.1| succinyl-CoA synthetase subunit alpha [Selenomonas artemidis F0399] gi|320138101|gb|EFW30003.1| succinyl-CoA synthetase subunit alpha [Selenomonas artemidis F0399] Length = 301 Score = 332 bits (850), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 164/297 (55%), Positives = 222/297 (74%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTK +VQG+TGKA FHT Q +L TQ+V G+ P K G VPV+ Sbjct: 1 MSILIDKNTKAIVQGITGKAALFHTRQ-MLDAGTQIVAGVTPGKAGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASVIYVP A D+I+E+++AE+PL++CITE IPVLDMV+V+ ++ Sbjct: 56 TVRDAVKATGANASVIYVPARFAADSIMEAVDAELPLVICITEHIPVLDMVKVRRYMQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG+LTP+ K+GI P S+ + G VG++SRSGTLTYEA FQ + G+GQ+T Sbjct: 116 KTRLLGPNCPGLLTPNQAKLGITPTSVAKPGHVGLVSRSGTLTYEAAFQLTNAGIGQTTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVK +FIDVL+LF AD T ++ ++GEIGG+AEEEAA+++++ +KP+ Sbjct: 176 VGIGGDPVKDMDFIDVLKLFKADPDTLAVFLIGEIGGTAEEEAAKWIRENMP---EKPVA 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+ APPG+ MGHAGA+ISGGKG A DK+ A+ AGI +A + A IG ++V+LL Sbjct: 233 AFIAGRQAPPGKRMGHAGAIISGGKGTAADKVAALNAAGIPVAETVAHIGDTMVKLL 289 >gi|77360585|ref|YP_340160.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Pseudoalteromonas haloplanktis TAC125] gi|76875496|emb|CAI86717.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Pseudoalteromonas haloplanktis TAC125] Length = 290 Score = 332 bits (850), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQALEY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP DAI+E+I+A I LIVCITEGIP LDMV VK +L+++ Sbjct: 56 TVREAVQETGATASVIYVPAPFCKDAILEAIDAGIELIVCITEGIPTLDMVDVKIKLDQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP KIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GTRMIGPNCPGVITPGETKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFEKDPQTEAIVMIGEIGGTAEEEAAEYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG++L E G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGKALKEKTG 289 >gi|218781621|ref|YP_002432939.1| succinyl-CoA synthetase, alpha subunit [Desulfatibacillum alkenivorans AK-01] gi|218763005|gb|ACL05471.1| Succinyl co-A ligase (ADP-forming), alpha subunit [Desulfatibacillum alkenivorans AK-01] Length = 289 Score = 332 bits (850), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 217/298 (72%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI V+K+TKV+VQG+TGK G FHT Q I Y T++V G+ P KG +VPVF Sbjct: 1 MSIFVNKDTKVVVQGITGKEGQFHTRQCIEY-GTKIVAGVTPGKGGQKMD----DVPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E AN S+I+VPP A DAI+E+I+AE+ L+V ITEGIPVLDM++VK L KS Sbjct: 56 SVYEAVEGAGANCSMIFVPPPFAADAILEAIDAEVDLVVAITEGIPVLDMMKVKNHLAKS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS-VGILSRSGTLTYEAVFQTSQEGLGQST 179 +RLIGPNCPG++TP CK+GIMPG I + G +G++SRSGTLTYE V Q +Q+G+GQ+T Sbjct: 116 KTRLIGPNCPGVITPGECKLGIMPGKIHKPGGPIGVVSRSGTLTYEVVHQLTQQGMGQTT 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FIDVL F AD T+ IVMVGEIGGSAEEEAA+F+K K P+ Sbjct: 176 CIGIGGDPVNGTNFIDVLSAFEADPETKGIVMVGEIGGSAEEEAAEFIKANLKI----PV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG TAPPGR MGHAGA+ISG G A+ KI AMK+AGI + + +G E+ Sbjct: 232 VGFIAGLTAPPGRRMGHAGAIISGSSGTAQAKIEAMKDAGIHVCENLGTLGELCKEVF 289 >gi|206602145|gb|EDZ38627.1| Succinyl-CoA synthetase, alpha subunit [Leptospirillum sp. Group II '5-way CG'] Length = 305 Score = 332 bits (850), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 172/304 (56%), Positives = 225/304 (74%), Gaps = 14/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD++T+V+VQG+TGK G++H Y T+VVGG+ P KG T G PV+ Sbjct: 1 MSILVDRSTRVIVQGITGKEGSYHATACREY-GTKVVGGVTPGKGGTTHEG----FPVWN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V +A+E + S+I+VPP+ A DAI+ESI A+IPLIVCITEGIPVLDMVRV+ L+ Sbjct: 56 SVFDAREAENPDVSLIFVPPAFAADAILESIAADIPLIVCITEGIPVLDMVRVRRVLDSR 115 Query: 121 SS-----RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 + RLIGPNCPGI+TPD KIGIMPG I ++G VG++SRSGTLTYEAV+Q +Q GL Sbjct: 116 NEQGNPIRLIGPNCPGIITPDGAKIGIMPGYIHKRGRVGVVSRSGTLTYEAVWQLTQLGL 175 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G+ST VGIGGDPV+G FIDVLE+F D TE++VM+GEIGG EE+AA F A+ Sbjct: 176 GESTCVGIGGDPVRGLNFIDVLEMFELDPETEAVVMIGEIGGEDEEKAAVF----AQTKM 231 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VGF+AG TAPPGR MGHAGA++SGGKG A DK+ ++ G+ + +P+ IG+++ + Sbjct: 232 TKPVVGFIAGLTAPPGRRMGHAGAIVSGGKGTARDKMAFLESHGVRVVDNPSLIGKTVAD 291 Query: 296 LLGS 299 +L S Sbjct: 292 VLAS 295 >gi|88811119|ref|ZP_01126375.1| Succinyl-CoA ligase, alpha subunit [Nitrococcus mobilis Nb-231] gi|88791658|gb|EAR22769.1| Succinyl-CoA ligase, alpha subunit [Nitrococcus mobilis Nb-231] Length = 290 Score = 332 bits (850), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 215/297 (72%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDK TKV+VQG TG+ GTFH EQ I Y TQ+VGG+ P +G +++ PVF Sbjct: 1 MSILVDKGTKVIVQGFTGRQGTFHAEQCISY-GTQIVGGVTPGRGGER----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA A+AS+IYVP A DAI+E+ E I +I CITEGIPV DM+RVKA L Sbjct: 56 TVREAVASVHADASMIYVPAVYAADAILEAAEGGIRVIACITEGIPVQDMLRVKAALTYY 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPG++TP CKIGIMPG I + GS+GI+SRSGTLTYEAV Q + GLGQST Sbjct: 116 DAILVGPNCPGVITPGECKIGIMPGQIHKAGSIGIVSRSGTLTYEAVKQITDIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP++G F+DVL+ F D T+ IVMVGEIGG++EEEAA+F++ +KP+V Sbjct: 176 VGIGGDPIQGLSFVDVLQRFEQDRQTKGIVMVGEIGGTSEEEAAEFIESNV----RKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VAG TAPPG+ MGHAGA+ISGGKG A+DK A+ +AG+ SPA IG ++ E Sbjct: 232 AYVAGVTAPPGKRMGHAGAIISGGKGMAKDKFTALVKAGVATVRSPAEIGSTMNEFF 288 >gi|152969299|ref|YP_001334408.1| succinyl-CoA synthetase subunit alpha [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893766|ref|YP_002918500.1| succinyl-CoA synthetase subunit alpha [Klebsiella pneumoniae NTUH-K2044] gi|262041209|ref|ZP_06014421.1| succinyl-CoA synthetase subunit alpha [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|329998754|ref|ZP_08303208.1| succinate-CoA ligase, alpha subunit [Klebsiella sp. MS 92-3] gi|150954148|gb|ABR76178.1| succinyl-CoA synthetase alpha subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546082|dbj|BAH62433.1| succinyl-CoA synthetase alpha subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041438|gb|EEW42497.1| succinyl-CoA synthetase subunit alpha [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328538581|gb|EGF64685.1| succinate-CoA ligase, alpha subunit [Klebsiella sp. MS 92-3] Length = 289 Score = 332 bits (850), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 171/297 (57%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFEEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAII 288 >gi|332535009|ref|ZP_08410825.1| succinyl-CoA ligase [ADP-forming] alpha chain [Pseudoalteromonas haloplanktis ANT/505] gi|332035576|gb|EGI72069.1| succinyl-CoA ligase [ADP-forming] alpha chain [Pseudoalteromonas haloplanktis ANT/505] Length = 290 Score = 331 bits (849), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 173/298 (58%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQALEY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A ASVIYVP DAI+E+I+A I LIVCITEGIP LDMV VK +L+++ Sbjct: 56 TVRDAVQETGATASVIYVPAPFCKDAILEAIDAGIELIVCITEGIPTLDMVDVKVKLDQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP KIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GTRMIGPNCPGVITPGETKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFEKDPQTEAIVMIGEIGGTAEEEAAEYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG++L E G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLAEIGKALKEKTG 289 >gi|82775997|ref|YP_402344.1| succinyl-CoA synthetase subunit alpha [Shigella dysenteriae Sd197] gi|309786392|ref|ZP_07681018.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella dysenteriae 1617] gi|81240145|gb|ABB60855.1| succinyl-CoA synthetase, alpha subunit [Shigella dysenteriae Sd197] gi|308925786|gb|EFP71267.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella dysenteriae 1617] Length = 289 Score = 331 bits (849), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 218/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGCTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVHSLADIGEALKTVL 288 >gi|24111995|ref|NP_706505.1| succinyl-CoA synthetase subunit alpha [Shigella flexneri 2a str. 301] gi|30062108|ref|NP_836279.1| succinyl-CoA synthetase subunit alpha [Shigella flexneri 2a str. 2457T] gi|110804644|ref|YP_688164.1| succinyl-CoA synthetase subunit alpha [Shigella flexneri 5 str. 8401] gi|24050809|gb|AAN42212.1| succinyl-CoA synthetase, alpha subunit [Shigella flexneri 2a str. 301] gi|30040353|gb|AAP16085.1| succinyl-CoA synthetase, alpha subunit [Shigella flexneri 2a str. 2457T] gi|110614192|gb|ABF02859.1| succinyl-CoA synthetase, alpha subunit [Shigella flexneri 5 str. 8401] gi|281599956|gb|ADA72940.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri 2002017] gi|313649630|gb|EFS14054.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri 2a str. 2457T] gi|332760906|gb|EGJ91194.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri 4343-70] gi|332761313|gb|EGJ91599.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri 2747-71] gi|332763953|gb|EGJ94191.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri K-671] gi|332768174|gb|EGJ98359.1| succinyl-CoA synthetase, alpha subunit [Shigella flexneri 2930-71] gi|333007362|gb|EGK26842.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri VA-6] gi|333008045|gb|EGK27521.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri K-218] gi|333010155|gb|EGK29590.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri K-272] gi|333021110|gb|EGK40367.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri K-227] gi|333021490|gb|EGK40740.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri K-304] Length = 289 Score = 331 bits (849), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 219/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A+ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGASASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 288 >gi|56414144|ref|YP_151219.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363066|ref|YP_002142703.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128401|gb|AAV77907.1| succinyl-CoA synthetase alpha chain [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094543|emb|CAR60063.1| succinyl-CoA synthetase alpha chain [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 289 Score = 331 bits (849), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 171/297 (57%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+V+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTRVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GG+G A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGEGTADEKFAALEAAGVKTVRSLADIGEALKAII 288 >gi|323947007|gb|EGB43021.1| succinate-CoA ligase [Escherichia coli H120] Length = 289 Score = 331 bits (848), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T ++++PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTT----HLSLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 288 >gi|212712442|ref|ZP_03320570.1| hypothetical protein PROVALCAL_03536 [Providencia alcalifaciens DSM 30120] gi|212684899|gb|EEB44427.1| hypothetical protein PROVALCAL_03536 [Providencia alcalifaciens DSM 30120] Length = 290 Score = 331 bits (848), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 174/297 (58%), Positives = 219/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVTPGKGGTIHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHMPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGNAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ LL Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKSLL 288 >gi|308186074|ref|YP_003930205.1| Succinyl-CoA synthetase, alpha subunit [Pantoea vagans C9-1] gi|308056584|gb|ADO08756.1| Succinyl-CoA synthetase, alpha subunit [Pantoea vagans C9-1] Length = 291 Score = 331 bits (848), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 174/297 (58%), Positives = 219/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D I+E+IEA I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDGILEAIEAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHQPGRVGIVSRSGTLTYEAVKQTTDIGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQDDPQTEAIVMIGEIGGSAEEEAAAFIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVL 288 >gi|119472924|ref|ZP_01614797.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding protein [Alteromonadales bacterium TW-7] gi|119444642|gb|EAW25951.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding protein [Alteromonadales bacterium TW-7] Length = 290 Score = 331 bits (848), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 173/298 (58%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQALEY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A ASVIYVP DAI+E+I+A I LIVCITEGIP LDMV VK +L+++ Sbjct: 56 TVRDAVQETGATASVIYVPAPFCKDAILEAIDAGIELIVCITEGIPTLDMVDVKVKLDQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP KIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GTRMIGPNCPGVITPGETKIGIMPGHIHKLGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFEKDPQTEAIVMIGEIGGTAEEEAAEYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG++L E G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTADEKFAALEAAGVQTVRSLADIGKALKEKTG 289 >gi|89256838|ref|YP_514200.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. holarctica LVS] gi|115315225|ref|YP_763948.1| succinate--CoA ligase (ADP-forming) [Francisella tularensis subsp. holarctica OSU18] gi|156503006|ref|YP_001429071.1| succinyl-CoA synthetase alpha chain [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009269|ref|ZP_02274200.1| succinyl-CoA synthetase alpha chain [Francisella tularensis subsp. holarctica FSC200] gi|254368117|ref|ZP_04984137.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. holarctica 257] gi|290954374|ref|ZP_06558995.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. holarctica URFT1] gi|295312195|ref|ZP_06802997.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. holarctica URFT1] gi|89144669|emb|CAJ79993.1| Succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. holarctica LVS] gi|115130124|gb|ABI83311.1| succinate--CoA ligase (ADP-forming) [Francisella tularensis subsp. holarctica OSU18] gi|134253927|gb|EBA53021.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. holarctica 257] gi|156253609|gb|ABU62115.1| succinyl-CoA synthetase alpha chain [Francisella tularensis subsp. holarctica FTNF002-00] Length = 290 Score = 331 bits (848), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 173/298 (58%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV KNTKVLVQG TGK GTFH+EQAI Y T +VGG+ P KG T N++ PVF Sbjct: 1 MSVLVYKNTKVLVQGFTGKNGTFHSEQAIAY-GTNIVGGVTPGKGGTT----NLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA T A+ASVIYVP D+ IE+I++ + L+V ITEG+P LDM+ VK L+ Sbjct: 56 TMAEAVAATGADASVIYVPAPFVKDSAIEAIDSGVKLVVIITEGVPTLDMLVVKEYLKDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPGI+TP CKIGIMPG I KG VGI+SRSGTLTYEAV QT++ G GQST Sbjct: 116 DVRVIGPNCPGIITPGECKIGIMPGHIHMKGKVGIISRSGTLTYEAVAQTTKLGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G I+ L+L D TE+I+++GEIGG+AEEEAA+++K KP++ Sbjct: 176 IGIGGDPIPGMNQIEALKLLENDPQTEAIILIGEIGGTAEEEAAEYIKHNV----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAPPG+ MGHAGA+ISGGKG AE+K A + AGI SPA IG+ L E+ G Sbjct: 232 GYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAAFEAAGIAYTRSPAEIGKKLKEVTG 289 >gi|254498638|ref|ZP_05111356.1| succinyl CoA synthetase alpha chain [Legionella drancourtii LLAP12] gi|254352086|gb|EET10903.1| succinyl CoA synthetase alpha chain [Legionella drancourtii LLAP12] Length = 291 Score = 331 bits (848), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 176/299 (58%), Positives = 219/299 (73%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K TKVL QG TGK GT+H+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLVNKQTKVLCQGFTGKQGTYHSEQAIAY-GTRMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A ASVIYVP D+IIE+ +A I LIVCITEG+PVLDM+ VK LE + Sbjct: 56 TMREAVDATKAEASVIYVPAPFCKDSIIEAADAGIQLIVCITEGVPVLDMLEVKVYLENN 115 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +RLIGPNCPGI+TP CKIGIMPGSI G VGI+SRSGTLTYEAV QT+ +G GQST Sbjct: 116 TQARLIGPNCPGIITPGECKIGIMPGSIHLPGKVGIVSRSGTLTYEAVKQTTDKGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT FID L LF D T++I+MVGEIGGSAEEEAA+++K KP+ Sbjct: 176 CIGIGGDPIPGTNFIDALALFEQDPQTQAIIMVGEIGGSAEEEAAEYIKSHI----SKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG TAP G+ MGHAGA+ISGGKG A +K A++ AG+ SPA +G ++ E+ G Sbjct: 232 VSYIAGVTAPAGKRMGHAGAIISGGKGTAAEKYAALEAAGVRTVRSPADLGDAIAEVTG 290 >gi|46446931|ref|YP_008296.1| succinate-CoA ligase (ADP-forming) alpha chain [Candidatus Protochlamydia amoebophila UWE25] gi|46400572|emb|CAF24021.1| probable succinate-CoA ligase (ADP-forming) alpha chain [Candidatus Protochlamydia amoebophila UWE25] Length = 301 Score = 331 bits (848), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 179/298 (60%), Positives = 229/298 (76%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+K T+V+ QG+TGKAG FHTEQ++LY T VGG+ P KG +G +PVF Sbjct: 1 MAILVNKQTRVITQGITGKAGRFHTEQSMLYAPT-YVGGVTPGKGGEEISG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK++T NAS+I+VPP A +AI+E+ EA I LIVCITEGIP+ DM++V + S Sbjct: 56 TVWEAKQKTQCNASLIFVPPPFAAEAILEAEEAGIELIVCITEGIPIQDMLKVSQVMRAS 115 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +SRLIGPNCPG++TP CK+GIMPG I +KG+VGI+SRSGTLTYEAV+QT+Q GLGQST Sbjct: 116 QTSRLIGPNCPGVITPGECKMGIMPGYIHQKGNVGIVSRSGTLTYEAVWQTTQLGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT FIDVL+LF D T++I+++GEIGG AEEEAA+++K KPI Sbjct: 176 CVGIGGDPLNGTNFIDVLKLFENDSETDAILLIGEIGGKAEEEAAEWIKQFC----SKPI 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAP GR MGHAGA++SGGKG A DKI +K+AG+ IA +PA +G S+ LL Sbjct: 232 AAFIAGQTAPIGRRMGHAGAIVSGGKGTASDKIKTLKQAGVLIAETPADMGLSVQLLL 289 >gi|261341315|ref|ZP_05969173.1| succinyl-CoA synthetase subunit alpha [Enterobacter cancerogenus ATCC 35316] gi|288316619|gb|EFC55557.1| succinyl-CoA synthetase subunit alpha [Enterobacter cancerogenus ATCC 35316] Length = 289 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 171/297 (57%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKSII 288 >gi|292490721|ref|YP_003526160.1| succinyl-CoA synthetase, subunit alpha [Nitrosococcus halophilus Nc4] gi|291579316|gb|ADE13773.1| succinyl-CoA synthetase, alpha subunit [Nitrosococcus halophilus Nc4] Length = 293 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 174/297 (58%), Positives = 225/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD+ T+V+ QG TGK GTFH++QAI Y TQ+VGG+ P KG ++ PVF Sbjct: 1 MSILVDEQTRVICQGFTGKQGTFHSQQAIEY-GTQLVGGVTPGKGGQT----HLERPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E T A+A++IYVP + A DAI+E+ I LIVCITEGIPVLDM++VKA L + Sbjct: 56 TVAEAVEATGADATMIYVPAALAADAILEAAAGGIRLIVCITEGIPVLDMLKVKAVLADT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPG++TP +CKIGIMPG+I + G +GI+SRSGTLTYEAV+QTSQ+GLGQST Sbjct: 116 PSRLVGPNCPGVITPGACKIGIMPGNIHQPGRIGIVSRSGTLTYEAVYQTSQKGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP++G F+D L LF D TE +++VGEIGGSAEEEAA++++ KP+V Sbjct: 176 VGIGGDPIQGMSFVDCLALFEQDSQTEGVILVGEIGGSAEEEAAEYIQHHV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA++SGGKG A+ K+ A+ AG+ IA SPA +G + + L Sbjct: 232 AYIAGITAPKGKRMGHAGAIVSGGKGTAKGKVEALSAAGVVIAHSPAEMGECMEQAL 288 >gi|145513372|ref|XP_001442597.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124409950|emb|CAK75200.1| unnamed protein product [Paramecium tetraurelia] Length = 337 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 221/297 (74%), Gaps = 10/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFTT 61 + V+K+TKV+ QG+TG GTF TEQA+ Y T++VGG+ PKK GST+ + +PVF Sbjct: 43 VWVNKHTKVICQGITGNQGTFQTEQALNYF-TKMVGGVSPKKAGSTH-----LGLPVFKD 96 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 EAK T +ASVIYVPP A AIIE+IEA+I L+V IT+GIP DM++VK L S Sbjct: 97 CKEAKSATGCDASVIYVPPPTAASAIIEAIEAQIGLVVVITDGIPQHDMIKVKHALRSQS 156 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPGI+ P+ CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQST Sbjct: 157 VTRVIGPNCPGIIKPNECKIGIMPGYIHQNGKIGIVSRSGTLTYEAVDQTTRAGLGQSTV 216 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FIDVLE F+ D TE IVM+GEIGG EE AA ++K + KP+V Sbjct: 217 VGIGGDPFNGTNFIDVLERFMVDPETEGIVMIGEIGGENEEMAADWIKKN--NPKNKPVV 274 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPP R MGHAGA++S GKG A +KI A+++AGI + SPA+IG++++E++ Sbjct: 275 GFIAGITAPPERRMGHAGAIVSKGKGSAPEKIRALEQAGIRVVKSPAQIGKTMLEVM 331 >gi|15800433|ref|NP_286445.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O157:H7 EDL933] gi|15830008|ref|NP_308781.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O157:H7 str. Sakai] gi|16128704|ref|NP_415257.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli str. K-12 substr. MG1655] gi|26246696|ref|NP_752736.1| succinyl-CoA synthetase subunit alpha [Escherichia coli CFT073] gi|74311253|ref|YP_309672.1| succinyl-CoA synthetase subunit alpha [Shigella sonnei Ss046] gi|82543156|ref|YP_407103.1| succinyl-CoA synthetase subunit alpha [Shigella boydii Sb227] gi|89107586|ref|AP_001366.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli str. K-12 substr. W3110] gi|91209762|ref|YP_539748.1| succinyl-CoA synthetase subunit alpha [Escherichia coli UTI89] gi|110640937|ref|YP_668665.1| succinyl-CoA synthetase subunit alpha [Escherichia coli 536] gi|117622922|ref|YP_851835.1| succinyl-CoA synthetase subunit alpha [Escherichia coli APEC O1] gi|157158239|ref|YP_001461888.1| succinyl-CoA synthetase subunit alpha [Escherichia coli E24377A] gi|157160208|ref|YP_001457526.1| succinyl-CoA synthetase subunit alpha [Escherichia coli HS] gi|168750660|ref|ZP_02775682.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4113] gi|168757182|ref|ZP_02782189.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4401] gi|168764010|ref|ZP_02789017.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4501] gi|168767169|ref|ZP_02792176.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4486] gi|168777545|ref|ZP_02802552.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4196] gi|168779212|ref|ZP_02804219.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4076] gi|168786882|ref|ZP_02811889.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC869] gi|168801362|ref|ZP_02826369.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC508] gi|170020927|ref|YP_001725881.1| succinyl-CoA synthetase subunit alpha [Escherichia coli ATCC 8739] gi|170080395|ref|YP_001729715.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli str. K-12 substr. DH10B] gi|170682614|ref|YP_001742829.1| succinyl-CoA synthetase subunit alpha [Escherichia coli SMS-3-5] gi|187731649|ref|YP_001879384.1| succinyl-CoA synthetase subunit alpha [Shigella boydii CDC 3083-94] gi|188494364|ref|ZP_03001634.1| succinyl-CoA synthetase alpha chain [Escherichia coli 53638] gi|191167206|ref|ZP_03029025.1| succinate-CoA ligase, alpha subunit [Escherichia coli B7A] gi|191174037|ref|ZP_03035553.1| succinate-CoA ligase, alpha subunit [Escherichia coli F11] gi|193065546|ref|ZP_03046614.1| succinate-CoA ligase, alpha subunit [Escherichia coli E22] gi|193070667|ref|ZP_03051604.1| succinate-CoA ligase, alpha subunit [Escherichia coli E110019] gi|194429074|ref|ZP_03061605.1| succinate-CoA ligase, alpha subunit [Escherichia coli B171] gi|194433979|ref|ZP_03066250.1| succinate-CoA ligase, alpha subunit [Shigella dysenteriae 1012] gi|194439235|ref|ZP_03071315.1| succinate-CoA ligase, alpha subunit [Escherichia coli 101-1] gi|195939070|ref|ZP_03084452.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O157:H7 str. EC4024] gi|208807584|ref|ZP_03249921.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4206] gi|208816368|ref|ZP_03257547.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4045] gi|208823169|ref|ZP_03263487.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4042] gi|209395766|ref|YP_002269352.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4115] gi|209917979|ref|YP_002292063.1| succinyl-CoA synthetase subunit alpha [Escherichia coli SE11] gi|217324254|ref|ZP_03440338.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. TW14588] gi|218549707|ref|YP_002383498.1| succinyl-CoA synthetase subunit alpha [Escherichia fergusonii ATCC 35469] gi|218553255|ref|YP_002386168.1| succinyl-CoA synthetase subunit alpha [Escherichia coli IAI1] gi|218557644|ref|YP_002390557.1| succinyl-CoA synthetase subunit alpha [Escherichia coli S88] gi|218688522|ref|YP_002396734.1| succinyl-CoA synthetase subunit alpha [Escherichia coli ED1a] gi|218694152|ref|YP_002401819.1| succinyl-CoA synthetase subunit alpha [Escherichia coli 55989] gi|218699083|ref|YP_002406712.1| succinyl-CoA synthetase subunit alpha [Escherichia coli IAI39] gi|218704045|ref|YP_002411564.1| succinyl-CoA synthetase subunit alpha [Escherichia coli UMN026] gi|227884305|ref|ZP_04002110.1| succinyl-CoA synthetase subunit alpha [Escherichia coli 83972] gi|237707309|ref|ZP_04537790.1| succinyl-CoA synthetase subunit alpha [Escherichia sp. 3_2_53FAA] gi|238899993|ref|YP_002925789.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli BW2952] gi|253774301|ref|YP_003037132.1| succinyl-CoA synthetase subunit alpha [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160798|ref|YP_003043906.1| succinyl-CoA synthetase subunit alpha [Escherichia coli B str. REL606] gi|254791875|ref|YP_003076712.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O157:H7 str. TW14359] gi|256021198|ref|ZP_05435063.1| succinyl-CoA synthetase subunit alpha [Shigella sp. D9] gi|256023670|ref|ZP_05437535.1| succinyl-CoA synthetase subunit alpha [Escherichia sp. 4_1_40B] gi|260842935|ref|YP_003220713.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O103:H2 str. 12009] gi|260853963|ref|YP_003227854.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O26:H11 str. 11368] gi|260866859|ref|YP_003233261.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O111:H- str. 11128] gi|261224429|ref|ZP_05938710.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261254580|ref|ZP_05947113.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O157:H7 str. FRIK966] gi|291281661|ref|YP_003498479.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli O55:H7 str. CB9615] gi|293403972|ref|ZP_06647966.1| succinyl-CoA synthetase alpha subunit [Escherichia coli FVEC1412] gi|293409102|ref|ZP_06652678.1| succinyl-CoA ligase subunit alpha [Escherichia coli B354] gi|293414006|ref|ZP_06656655.1| succinyl-CoA ligase subunit alpha [Escherichia coli B185] gi|293432997|ref|ZP_06661425.1| succinyl-CoA ligase subunit alpha [Escherichia coli B088] gi|298379748|ref|ZP_06989353.1| succinyl-CoA ligase subunit alpha [Escherichia coli FVEC1302] gi|300816376|ref|ZP_07096598.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 107-1] gi|300822984|ref|ZP_07103119.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 119-7] gi|300900723|ref|ZP_07118872.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 198-1] gi|300906986|ref|ZP_07124655.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 84-1] gi|300918388|ref|ZP_07134988.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 115-1] gi|300929467|ref|ZP_07144935.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 187-1] gi|300937815|ref|ZP_07152611.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 21-1] gi|300957676|ref|ZP_07169865.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 175-1] gi|300972377|ref|ZP_07171914.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 200-1] gi|300993154|ref|ZP_07180237.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 45-1] gi|301020811|ref|ZP_07184875.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 69-1] gi|301027091|ref|ZP_07190463.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 196-1] gi|301051352|ref|ZP_07198175.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 185-1] gi|301305215|ref|ZP_07211313.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 124-1] gi|301327920|ref|ZP_07221091.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 78-1] gi|301648032|ref|ZP_07247799.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 146-1] gi|306812863|ref|ZP_07447056.1| succinyl-CoA synthetase subunit alpha [Escherichia coli NC101] gi|307137340|ref|ZP_07496696.1| succinyl-CoA synthetase subunit alpha [Escherichia coli H736] gi|307314807|ref|ZP_07594401.1| succinyl-CoA synthetase, alpha subunit [Escherichia coli W] gi|309797441|ref|ZP_07691833.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 145-7] gi|312970806|ref|ZP_07784985.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli 1827-70] gi|331641229|ref|ZP_08342364.1| succinyl-CoA synthetase subunit alpha [Escherichia coli H736] gi|331645877|ref|ZP_08346980.1| succinyl-CoA synthetase subunit alpha [Escherichia coli M605] gi|331651726|ref|ZP_08352745.1| succinyl-CoA synthetase subunit alpha [Escherichia coli M718] gi|331662081|ref|ZP_08363004.1| succinyl-CoA synthetase subunit alpha [Escherichia coli TA143] gi|331667095|ref|ZP_08367960.1| succinyl-CoA synthetase subunit alpha [Escherichia coli TA271] gi|331672243|ref|ZP_08373034.1| succinyl-CoA synthetase subunit alpha [Escherichia coli TA280] gi|331676410|ref|ZP_08377107.1| succinyl-CoA synthetase subunit alpha [Escherichia coli H591] gi|331682159|ref|ZP_08382781.1| succinyl-CoA synthetase subunit alpha [Escherichia coli H299] gi|332282424|ref|ZP_08394837.1| succinyl-CoA synthetase subunit alpha [Shigella sp. D9] gi|84027800|sp|P0AGF1|SUCD_ECO57 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|84027801|sp|P0AGF0|SUCD_ECOL6 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|84027802|sp|P0AGE9|SUCD_ECOLI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|12513647|gb|AAG55053.1|AE005251_2 succinyl-CoA synthetase, alpha subunit [Escherichia coli O157:H7 str. EDL933] gi|26107095|gb|AAN79279.1|AE016757_183 Succinyl-CoA synthetase alpha chain [Escherichia coli CFT073] gi|146204|gb|AAA23900.1| succinyl-CoA synthetase alpha-subunit [Escherichia coli K-12] gi|1651324|dbj|BAA35395.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli str. K12 substr. W3110] gi|1786949|gb|AAC73823.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli str. K-12 substr. MG1655] gi|13360213|dbj|BAB34177.1| succinyl-CoA synthetase alpha subunit [Escherichia coli O157:H7 str. Sakai] gi|73854730|gb|AAZ87437.1| succinyl-CoA synthetase, alpha subunit [Shigella sonnei Ss046] gi|81244567|gb|ABB65275.1| succinyl-CoA synthetase, alpha subunit [Shigella boydii Sb227] gi|91071336|gb|ABE06217.1| succinyl-CoA synthetase, alpha subunit [Escherichia coli UTI89] gi|110342529|gb|ABG68766.1| succinyl-CoA synthetase alpha chain [Escherichia coli 536] gi|115512046|gb|ABJ00121.1| succinyl-CoA synthetase alpha subunit [Escherichia coli APEC O1] gi|157065888|gb|ABV05143.1| succinate-CoA ligase, alpha subunit [Escherichia coli HS] gi|157080269|gb|ABV19977.1| succinate-CoA ligase, alpha subunit [Escherichia coli E24377A] gi|169755855|gb|ACA78554.1| succinyl-CoA synthetase, alpha subunit [Escherichia coli ATCC 8739] gi|169888230|gb|ACB01937.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli str. K-12 substr. DH10B] gi|170520332|gb|ACB18510.1| succinate-CoA ligase, alpha subunit [Escherichia coli SMS-3-5] gi|187428641|gb|ACD07915.1| succinate-CoA ligase, alpha subunit [Shigella boydii CDC 3083-94] gi|187767223|gb|EDU31067.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4196] gi|188015186|gb|EDU53308.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4113] gi|188489563|gb|EDU64666.1| succinyl-CoA synthetase alpha chain [Escherichia coli 53638] gi|189002716|gb|EDU71702.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4076] gi|189355809|gb|EDU74228.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4401] gi|189363351|gb|EDU81770.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4486] gi|189365933|gb|EDU84349.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4501] gi|189373079|gb|EDU91495.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC869] gi|189376494|gb|EDU94910.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC508] gi|190902754|gb|EDV62484.1| succinate-CoA ligase, alpha subunit [Escherichia coli B7A] gi|190905645|gb|EDV65268.1| succinate-CoA ligase, alpha subunit [Escherichia coli F11] gi|192926835|gb|EDV81461.1| succinate-CoA ligase, alpha subunit [Escherichia coli E22] gi|192956055|gb|EDV86521.1| succinate-CoA ligase, alpha subunit [Escherichia coli E110019] gi|194412905|gb|EDX29196.1| succinate-CoA ligase, alpha subunit [Escherichia coli B171] gi|194417744|gb|EDX33842.1| succinate-CoA ligase, alpha subunit [Shigella dysenteriae 1012] gi|194421820|gb|EDX37827.1| succinate-CoA ligase, alpha subunit [Escherichia coli 101-1] gi|208727385|gb|EDZ76986.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4206] gi|208733016|gb|EDZ81704.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4045] gi|208737362|gb|EDZ85046.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4042] gi|209157166|gb|ACI34599.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4115] gi|209776458|gb|ACI86541.1| succinyl-CoA synthetase alpha subunit [Escherichia coli] gi|209776460|gb|ACI86542.1| succinyl-CoA synthetase alpha subunit [Escherichia coli] gi|209776462|gb|ACI86543.1| succinyl-CoA synthetase alpha subunit [Escherichia coli] gi|209776466|gb|ACI86545.1| succinyl-CoA synthetase alpha subunit [Escherichia coli] gi|209911238|dbj|BAG76312.1| succinyl-CoA synthase alpha subunit [Escherichia coli SE11] gi|217320475|gb|EEC28899.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. TW14588] gi|218350884|emb|CAU96582.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli 55989] gi|218357248|emb|CAQ89883.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia fergusonii ATCC 35469] gi|218360023|emb|CAQ97570.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli IAI1] gi|218364413|emb|CAR02093.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli S88] gi|218369069|emb|CAR16823.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli IAI39] gi|218426086|emb|CAR06904.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli ED1a] gi|218431142|emb|CAR12018.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli UMN026] gi|222032465|emb|CAP75204.1| Succinyl-CoA ligase [adP-forming] subunit alpha [Escherichia coli LF82] gi|226898519|gb|EEH84778.1| succinyl-CoA synthetase subunit alpha [Escherichia sp. 3_2_53FAA] gi|227838726|gb|EEJ49192.1| succinyl-CoA synthetase subunit alpha [Escherichia coli 83972] gi|238863593|gb|ACR65591.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli BW2952] gi|242376490|emb|CAQ31194.1| succinyl-CoA synthetase, alpha subunit, subunit of succinyl-CoA synthetase [Escherichia coli BL21(DE3)] gi|253325345|gb|ACT29947.1| succinyl-CoA synthetase, alpha subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972699|gb|ACT38370.1| succinyl-CoA synthetase subunit alpha [Escherichia coli B str. REL606] gi|253976893|gb|ACT42563.1| succinyl-CoA synthetase subunit alpha [Escherichia coli BL21(DE3)] gi|254591275|gb|ACT70636.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O157:H7 str. TW14359] gi|257752612|dbj|BAI24114.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O26:H11 str. 11368] gi|257758082|dbj|BAI29579.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O103:H2 str. 12009] gi|257763215|dbj|BAI34710.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O111:H- str. 11128] gi|260450118|gb|ACX40540.1| succinyl-CoA synthetase, alpha subunit [Escherichia coli DH1] gi|281177871|dbj|BAI54201.1| succinyl-CoA synthetase alpha subunit [Escherichia coli SE15] gi|284920507|emb|CBG33569.1| succinyl-CoA synthetase alpha chain [Escherichia coli 042] gi|290761534|gb|ADD55495.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli O55:H7 str. CB9615] gi|291323816|gb|EFE63238.1| succinyl-CoA ligase subunit alpha [Escherichia coli B088] gi|291428558|gb|EFF01583.1| succinyl-CoA synthetase alpha subunit [Escherichia coli FVEC1412] gi|291434064|gb|EFF07037.1| succinyl-CoA ligase subunit alpha [Escherichia coli B185] gi|291469570|gb|EFF12054.1| succinyl-CoA ligase subunit alpha [Escherichia coli B354] gi|294493816|gb|ADE92572.1| succinate-CoA ligase, alpha subunit [Escherichia coli IHE3034] gi|298279446|gb|EFI20954.1| succinyl-CoA ligase subunit alpha [Escherichia coli FVEC1302] gi|299879425|gb|EFI87636.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 196-1] gi|300297014|gb|EFJ53399.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 185-1] gi|300309176|gb|EFJ63696.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 200-1] gi|300315594|gb|EFJ65378.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 175-1] gi|300355782|gb|EFJ71652.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 198-1] gi|300398457|gb|EFJ81995.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 69-1] gi|300401207|gb|EFJ84745.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 84-1] gi|300406684|gb|EFJ90222.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 45-1] gi|300414451|gb|EFJ97761.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 115-1] gi|300457180|gb|EFK20673.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 21-1] gi|300462576|gb|EFK26069.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 187-1] gi|300524525|gb|EFK45594.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 119-7] gi|300531066|gb|EFK52128.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 107-1] gi|300839527|gb|EFK67287.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 124-1] gi|300845563|gb|EFK73323.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 78-1] gi|301073858|gb|EFK88664.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 146-1] gi|305853626|gb|EFM54065.1| succinyl-CoA synthetase subunit alpha [Escherichia coli NC101] gi|306905705|gb|EFN36233.1| succinyl-CoA synthetase, alpha subunit [Escherichia coli W] gi|307552580|gb|ADN45355.1| succinyl-CoA ligase subunit alpha [Escherichia coli ABU 83972] gi|307627857|gb|ADN72161.1| succinyl-CoA synthetase subunit alpha [Escherichia coli UM146] gi|308118965|gb|EFO56227.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 145-7] gi|309700950|emb|CBJ00247.1| succinyl-CoA synthetase alpha chain [Escherichia coli ETEC H10407] gi|310336567|gb|EFQ01734.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli 1827-70] gi|312945253|gb|ADR26080.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O83:H1 str. NRG 857C] gi|315059971|gb|ADT74298.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli W] gi|315135384|dbj|BAJ42543.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli DH1] gi|315257646|gb|EFU37614.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 85-1] gi|315287157|gb|EFU46569.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 110-3] gi|315292642|gb|EFU51994.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 153-1] gi|315299269|gb|EFU58521.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 16-3] gi|315614603|gb|EFU95245.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli 3431] gi|320177272|gb|EFW52278.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Shigella dysenteriae CDC 74-1112] gi|320179431|gb|EFW54388.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Shigella boydii ATCC 9905] gi|320182933|gb|EFW57802.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Shigella flexneri CDC 796-83] gi|320193123|gb|EFW67763.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Escherichia coli O157:H7 str. EC1212] gi|320194114|gb|EFW68746.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Escherichia coli WV_060327] gi|320198153|gb|EFW72757.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Escherichia coli EC4100B] gi|320637976|gb|EFX07745.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O157:H7 str. G5101] gi|320643371|gb|EFX12551.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O157:H- str. 493-89] gi|320648720|gb|EFX17353.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O157:H- str. H 2687] gi|320654304|gb|EFX22357.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659937|gb|EFX27479.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O55:H7 str. USDA 5905] gi|320664761|gb|EFX31899.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O157:H7 str. LSU-61] gi|323153758|gb|EFZ40005.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli EPECa14] gi|323163887|gb|EFZ49697.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella sonnei 53G] gi|323170848|gb|EFZ56498.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli LT-68] gi|323180033|gb|EFZ65589.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli 1180] gi|323185113|gb|EFZ70479.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli 1357] gi|323379469|gb|ADX51737.1| succinyl-CoA synthetase, alpha subunit [Escherichia coli KO11] gi|323938306|gb|EGB34563.1| succinate-CoA ligase [Escherichia coli E1520] gi|323942950|gb|EGB39114.1| succinate-CoA ligase [Escherichia coli E482] gi|323952713|gb|EGB48581.1| succinate-CoA ligase [Escherichia coli H252] gi|323958473|gb|EGB54179.1| succinate-CoA ligase [Escherichia coli H263] gi|323963109|gb|EGB58679.1| succinate-CoA ligase [Escherichia coli H489] gi|323967435|gb|EGB62855.1| succinate-CoA ligase [Escherichia coli M863] gi|323972013|gb|EGB67233.1| succinate-CoA ligase [Escherichia coli TA007] gi|323976301|gb|EGB71391.1| succinate-CoA ligase [Escherichia coli TW10509] gi|324009578|gb|EGB78797.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 57-2] gi|324010450|gb|EGB79669.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 60-1] gi|324020365|gb|EGB89584.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 117-3] gi|324114838|gb|EGC08806.1| succinate-CoA ligase [Escherichia fergusonii B253] gi|324116269|gb|EGC10190.1| succinate-CoA ligase [Escherichia coli E1167] gi|326341533|gb|EGD65323.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Escherichia coli O157:H7 str. 1044] gi|326345751|gb|EGD69490.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Escherichia coli O157:H7 str. 1125] gi|327254407|gb|EGE66029.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli STEC_7v] gi|330910477|gb|EGH38987.1| succinyl-CoA ligase [ADP-forming] alpha chain [Escherichia coli AA86] gi|331038027|gb|EGI10247.1| succinyl-CoA synthetase subunit alpha [Escherichia coli H736] gi|331044629|gb|EGI16756.1| succinyl-CoA synthetase subunit alpha [Escherichia coli M605] gi|331050004|gb|EGI22062.1| succinyl-CoA synthetase subunit alpha [Escherichia coli M718] gi|331060503|gb|EGI32467.1| succinyl-CoA synthetase subunit alpha [Escherichia coli TA143] gi|331065451|gb|EGI37344.1| succinyl-CoA synthetase subunit alpha [Escherichia coli TA271] gi|331070438|gb|EGI41802.1| succinyl-CoA synthetase subunit alpha [Escherichia coli TA280] gi|331075903|gb|EGI47200.1| succinyl-CoA synthetase subunit alpha [Escherichia coli H591] gi|331080583|gb|EGI51759.1| succinyl-CoA synthetase subunit alpha [Escherichia coli H299] gi|332093789|gb|EGI98843.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella boydii 5216-82] gi|332096447|gb|EGJ01443.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella dysenteriae 155-74] gi|332097685|gb|EGJ02660.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella boydii 3594-74] gi|332104776|gb|EGJ08122.1| succinyl-CoA synthetase subunit alpha [Shigella sp. D9] gi|332342064|gb|AEE55398.1| succinyl-CoA ligase, alpha subunit SucD [Escherichia coli UMNK88] Length = 289 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 218/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 288 >gi|296103342|ref|YP_003613488.1| succinyl-CoA synthetase alpha subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057801|gb|ADF62539.1| succinyl-CoA synthetase alpha subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 289 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 171/297 (57%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKSII 288 >gi|330503178|ref|YP_004380047.1| succinyl-CoA synthetase subunit alpha [Pseudomonas mendocina NK-01] gi|328917464|gb|AEB58295.1| succinyl-CoA synthetase subunit alpha [Pseudomonas mendocina NK-01] Length = 295 Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVAATGAEASVIYVPAPFCKDSILEAANGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|325498097|gb|EGC95956.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Escherichia fergusonii ECD227] Length = 289 Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 218/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLAVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 288 >gi|209776464|gb|ACI86544.1| succinyl-CoA synthetase alpha subunit [Escherichia coli] Length = 289 Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 218/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPALFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 288 >gi|77457845|ref|YP_347350.1| succinyl-CoA synthetase subunit alpha [Pseudomonas fluorescens Pf0-1] gi|77381848|gb|ABA73361.1| succinyl-CoA synthetase alpha chain [Pseudomonas fluorescens Pf0-1] Length = 294 Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 173/298 (58%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T ++N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGAQGTFHSEQAIAY-GTKMVGGVTPGKGGTT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+ I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKEAVEATGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVTLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|206579009|ref|YP_002239647.1| succinate-CoA ligase, alpha subunit [Klebsiella pneumoniae 342] gi|288936488|ref|YP_003440547.1| succinyl-CoA synthetase, subunit alpha [Klebsiella variicola At-22] gi|290510456|ref|ZP_06549826.1| succinyl-CoA ligase subunit alpha [Klebsiella sp. 1_1_55] gi|206568067|gb|ACI09843.1| succinate-CoA ligase, alpha subunit [Klebsiella pneumoniae 342] gi|288891197|gb|ADC59515.1| succinyl-CoA synthetase, alpha subunit [Klebsiella variicola At-22] gi|289777172|gb|EFD85170.1| succinyl-CoA ligase subunit alpha [Klebsiella sp. 1_1_55] Length = 289 Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 171/297 (57%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAII 288 >gi|194866162|ref|XP_001971787.1| GG15160 [Drosophila erecta] gi|190653570|gb|EDV50813.1| GG15160 [Drosophila erecta] Length = 328 Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 172/300 (57%), Positives = 231/300 (77%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLNGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 VAEAK+ T +A+VIYVPP GA AIIE+++AEIPLIVCITEG+P DMV+VK A + +S Sbjct: 86 VAEAKKATDPHATVIYVPPPGAAAAIIEALDAEIPLIVCITEGVPQHDMVKVKHALISQS 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLTEYNSGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 266 SFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKEMKRL 325 >gi|73666780|ref|YP_302796.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ehrlichia canis str. Jake] gi|72393921|gb|AAZ68198.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ehrlichia canis str. Jake] Length = 295 Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 183/299 (61%), Positives = 229/299 (76%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVD+NTKV+ QG TG GTFH+EQAI Y T +VGG+ P KG T ++N+PVF Sbjct: 1 MSVLVDRNTKVICQGFTGAHGTFHSEQAIAY-GTNMVGGVTPGKGGT----SHLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +AK T ANA+VIYVP A DAI+E+IEA I LI+CITEGIP+LDMV+VK L S Sbjct: 56 TVKQAKLDTGANATVIYVPAPYAADAILEAIEAGIELIICITEGIPILDMVQVKRALLSS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +S LIGPNCPGI+TP+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQST Sbjct: 116 NSILIGPNCPGIITPEECKIGIMPGYIHKRGHIGVISRSGTLTYEAVAQTTEVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G F D ++LF+ D T I+M+GEIGGS EEEAA+F+K G KP+V Sbjct: 176 IGIGGDPIHGMSFTDCIKLFINDPDTHGIIMIGEIGGSEEEEAAEFIK---LSGTDKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AGKTAPPG+ MGHAGA+ SG G AE KI AMK AGI IA +PA IG++++E + + Sbjct: 233 GFIAGKTAPPGKRMGHAGAISSGTSGSAESKIEAMKNAGIVIAETPAVIGKTMLEAMNN 291 >gi|118595148|ref|ZP_01552495.1| Succinyl-CoA ligase, alpha subunit [Methylophilales bacterium HTCC2181] gi|118440926|gb|EAV47553.1| Succinyl-CoA ligase, alpha subunit [Methylophilales bacterium HTCC2181] Length = 291 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 169/300 (56%), Positives = 220/300 (73%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVDKNT+VL QG TGK GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MAILVDKNTRVLCQGFTGKQGTFHSEQAITY-GTKLVGGVTPSKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 + EA T ANA++IYVPP A ++IIE+ EA I LIVCITEGIP+L+M+RVK + + Sbjct: 56 NMVEAVNETKANATMIYVPPPFAANSIIEASEAGIDLIVCITEGIPILEMLRVKEVINAN 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S+LIGPNCPGI+TPD CK+GIMP SI + G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GSKLIGPNCPGIITPDQCKMGIMPASIHQAGAIGIISRSGTLTYEAVHQTTAFGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+KG FI+ L +F D +T+ I+MVGEIGG+ EE AA++++ KP+V Sbjct: 176 IGIGGDPIKGLNFIECLAMFEKDPSTKGIIMVGEIGGTDEELAAEYIQSNI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 +AG TAP G+ MGHAGA+ISG G AEDKI +++AG IA SP+ +G + +++ L Sbjct: 232 AHIAGITAPKGKRMGHAGAIISGNTGKAEDKIRCLEKAGALIARSPSDMGSMINKVMIQL 291 >gi|215485747|ref|YP_002328178.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O127:H6 str. E2348/69] gi|312965159|ref|ZP_07779396.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli 2362-75] gi|215263819|emb|CAS08156.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O127:H6 str. E2348/69] gi|312290250|gb|EFR18133.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli 2362-75] gi|323191073|gb|EFZ76338.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli RN587/1] Length = 289 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 218/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLIVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 288 >gi|292487656|ref|YP_003530529.1| succinyl-CoA synthetase subunit alpha [Erwinia amylovora CFBP1430] gi|292898893|ref|YP_003538262.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Erwinia amylovora ATCC 49946] gi|291198741|emb|CBJ45850.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Erwinia amylovora ATCC 49946] gi|291553076|emb|CBA20121.1| succinyl-CoA synthetase alpha chain [Erwinia amylovora CFBP1430] gi|312171764|emb|CBX80022.1| succinyl-CoA synthetase alpha chain [Erwinia amylovora ATCC BAA-2158] Length = 290 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 174/297 (58%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D I+E+IEA I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDGILEAIEAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP +CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGACKIGIMPGHIHQPGRIGIVSRSGTLTYEAVKQTTDIGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQDDPQTEAIVMIGEIGGSAEEEAAAFIKEYV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVL 288 >gi|261343501|ref|ZP_05971146.1| succinyl-CoA synthetase subunit alpha [Providencia rustigianii DSM 4541] gi|282568647|gb|EFB74182.1| succinyl-CoA synthetase subunit alpha [Providencia rustigianii DSM 4541] Length = 290 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 219/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGQCKIGIQPGHIHMPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEE+AA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGNAEEDAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ LL Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKSLL 288 >gi|126668315|ref|ZP_01739274.1| succinyl-CoA synthetase subunit alpha [Marinobacter sp. ELB17] gi|126627232|gb|EAZ97870.1| succinyl-CoA synthetase subunit alpha [Marinobacter sp. ELB17] Length = 290 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH++QAI Y T +VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGSQGTFHSQQAIEY-GTNMVGGVSPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A+A+VIYVP DAIIE+ +A I LIVCITEGIP +DM+ K +++ Sbjct: 56 TVREAVEKTGAHATVIYVPAPFCKDAIIEAADAGIELIVCITEGIPTIDMLYAKEYVDRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDFGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+L D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLLQEDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+ +AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALNDAGVKTVRSLADIGKALKEVTG 289 >gi|255318879|ref|ZP_05360105.1| succinate-CoA ligase, alpha subunit family [Acinetobacter radioresistens SK82] gi|262378865|ref|ZP_06072022.1| succinyl-CoA synthetase subunit alpha [Acinetobacter radioresistens SH164] gi|255304135|gb|EET83326.1| succinate-CoA ligase, alpha subunit family [Acinetobacter radioresistens SK82] gi|262300150|gb|EEY88062.1| succinyl-CoA synthetase subunit alpha [Acinetobacter radioresistens SH164] Length = 296 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 170/299 (56%), Positives = 225/299 (75%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKVLVQG TGK GTFH+EQAI Y T+VVGG+ P KG ++N+PVF Sbjct: 1 MSVLVNKDTKVLVQGFTGKNGTFHSEQAIAYG-TKVVGGVTPGKGGQ----SHLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A+ASVIYVP D+I+E+++A I LIV ITEG+P LDM++ K LE + Sbjct: 56 TMREAVQETQADASVIYVPAPFVLDSIVEAVDAGIGLIVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RLIGPNCPGI+TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLIGPNCPGIITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVSQTTRLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQDDPETDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGMAYTRSPAELGSTMLQVL 290 >gi|195491498|ref|XP_002093588.1| succinyl coenzyme A synthetase alpha subunit [Drosophila yakuba] gi|194179689|gb|EDW93300.1| succinyl coenzyme A synthetase alpha subunit [Drosophila yakuba] Length = 328 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 172/300 (57%), Positives = 231/300 (77%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLNGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 VAEAK+ T +A+VIYVPP GA AIIE+++AEIPLIVCITEG+P DMV+VK A + +S Sbjct: 86 VAEAKKATDPHATVIYVPPPGAAAAIIEALDAEIPLIVCITEGVPQHDMVKVKHALISQS 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLTEYNSGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 266 SFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKEMKRL 325 >gi|317050500|ref|YP_004111616.1| succinyl-CoA synthetase subunit alpha [Desulfurispirillum indicum S5] gi|316945584|gb|ADU65060.1| succinyl-CoA synthetase, alpha subunit [Desulfurispirillum indicum S5] Length = 305 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 169/298 (56%), Positives = 220/298 (73%), Gaps = 7/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+ +T+V+ QG+TG G FHTE A+ Y T++VGG+ P KG T G V PVF Sbjct: 1 MSILVNSDTRVITQGITGSQGLFHTEMALKY-GTRMVGGVTPGKGGTTALDGKV--PVFN 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VA+A T ANAS+IYVPP A DAI+E+ +A + +I CITEGIP+LDM+RVK L + Sbjct: 58 SVAQAVSETGANASMIYVPPLFAADAIMEAADAGVEIIACITEGIPILDMIRVKDFLRTT 117 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +LIGPNCPGI+TPD CKIGIMPG I ++G +GI+SRSGTLTYEAV Q S LGQST Sbjct: 118 PGIKLIGPNCPGIITPDECKIGIMPGYIHKRGHIGIVSRSGTLTYEAVNQLSSRNLGQST 177 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ G +D+++ F AD+ T ++VM+GEIGGS EE+AAQ++ A+ R KP+ Sbjct: 178 VVGIGGDPINGLTHLDIMKRFAADDDTLAVVMIGEIGGSNEEKAAQWV---AENMRHKPV 234 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG TAP G+ MGHAGA++SG G A+ KI+AMK+AGI +AP+ IG + + L Sbjct: 235 VGFIAGATAPEGKRMGHAGAIVSGNTGSAQSKISAMKDAGIRVAPTIVDIGTIMEQFL 292 >gi|322833840|ref|YP_004213867.1| succinyl-CoA synthetase subunit alpha [Rahnella sp. Y9602] gi|321169041|gb|ADW74740.1| succinyl-CoA synthetase, alpha subunit [Rahnella sp. Y9602] Length = 290 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 218/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILINKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+++A I LI+CITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVETTGATASVIYVPAPFCKDSILEALDAGIKLIICITEGIPTLDMLVVKVKLDQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + +IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 DAVMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDYGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEVIVMIGEIGGNAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ LL Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEAVKSLL 288 >gi|221134284|ref|ZP_03560589.1| succinyl-CoA synthetase, alpha subunit [Glaciecola sp. HTCC2999] Length = 290 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIEY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP + D+IIE+ +A I +IVCITEGIP +DM+ VK + + Sbjct: 56 TVKDAVAETGATASVIYVPAAFCKDSIIEAADAGIEIIVCITEGIPTVDMIYVKEYVSQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TP CKIGIMPG I + G VG++SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVTMIGPNCPGVITPGECKIGIMPGHIHKPGKVGVVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FIDVL+LF D TE+IVM+GEIGG+AEEEAA+F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDVLKLFQNDPQTEAIVMIGEIGGTAEEEAAEFIKNNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALEAAGVKTVRSLADIGKALREITG 289 >gi|89095245|ref|ZP_01168167.1| succinyl-CoA synthetase alpha chain [Oceanospirillum sp. MED92] gi|89080499|gb|EAR59749.1| succinyl-CoA synthetase alpha chain [Oceanospirillum sp. MED92] Length = 290 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A ASVIYVP D+I+E+ A I LIVCITE IPV+DM+ K R ++ Sbjct: 56 TVAEAVAETGAEASVIYVPAPFCKDSILEAANAGIKLIVCITEHIPVMDMLECKVRCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA+F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFQNDPQTEAIVMIGEIGGSAEEEAAEFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A+IG +L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLAQIGDALKEVTG 289 >gi|255003993|ref|ZP_05278794.1| succinyl-CoA ligase chain A (sucD) [Anaplasma marginale str. Virginia] Length = 279 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 184/286 (64%), Positives = 219/286 (76%), Gaps = 8/286 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNT+V+ QG TG GTFH+EQAI Y T+VVGG+ P KG T G +PVF Sbjct: 1 MSVLVDKNTRVICQGFTGSNGTFHSEQAIAY-GTKVVGGVTPGKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +AK T ANASVIYVP A DAI E+IEAEI LIVCITEGIPVLDMV+VK L S Sbjct: 56 TVLQAKVETQANASVIYVPAPYAADAIFEAIEAEIELIVCITEGIPVLDMVQVKRALAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR+IGPNCPGI+TP+ CKIGIMPG I +KG++G++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRMIGPNCPGIITPEECKIGIMPGYIHKKGNIGVVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+D ++LFL DE T IV++GEIGGS EEEA +FL+ G KKP+V Sbjct: 176 IGIGGDPVHGMSFLDCVQLFLEDEDTHGIVIIGEIGGSEEEEAVEFLQSS---GTKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 GFVAG+TAPPG+ MGHAGA+ SG G A+ KI MK AG+ +A +P Sbjct: 233 GFVAGQTAPPGKRMGHAGAISSGSSGTAKGKIEFMKRAGVAVAETP 278 >gi|321261563|ref|XP_003195501.1| succinyl-coa ligase alpha-chain, mitochondrial precursor [Cryptococcus gattii WM276] gi|317461974|gb|ADV23714.1| Succinyl-coa ligase alpha-chain, mitochondrial precursor, putative [Cryptococcus gattii WM276] Length = 333 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 221/298 (74%), Gaps = 8/298 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +IL++KNTKVLVQG TGK GTFH +QAI Y T+++GG +PKK G +PVF T Sbjct: 36 NILINKNTKVLVQGFTGKTGTFHAQQAIEYG-TKMIGGTNPKKAGQTHLG----LPVFGT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA +ASVIYVPP A DAIIE+IE EI LIV ITEGIP D +RV L+ +S Sbjct: 91 VREAVREAQPDASVIYVPPPFAADAIIEAIENEIKLIVTITEGIPQRDQIRVMNALKSQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR+IG NCPGI++ + CK+GIMPG IF++G +G++SRSGTLTYEAV QT+ GLGQS Sbjct: 151 KSRMIGGNCPGIIS-EGCKMGIMPGHIFKQGKIGVVSRSGTLTYEAVNQTTLAGLGQSLT 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPI 239 VGIGGDP GT+ IDV+++ L+D TE IV++GEIGGS EEEAA +L+ K KP+ Sbjct: 210 VGIGGDPFPGTQHIDVVKVLLSDPRTEGIVLIGEIGGSMEEEAAAYLEQHNKNSANPKPV 269 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V F+AG+TAPPGR MGHAGA+ISGGKG A DK+ A+++AG IA SPA+IG +++ + Sbjct: 270 VAFIAGRTAPPGRRMGHAGAIISGGKGAASDKVAALQKAGAIIAESPAQIGGLMLKAM 327 >gi|254374016|ref|ZP_04989498.1| hypothetical protein FTDG_00176 [Francisella novicida GA99-3548] gi|151571736|gb|EDN37390.1| hypothetical protein FTDG_00176 [Francisella novicida GA99-3548] Length = 290 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKVLVQG TGK GTFH+EQAI Y T +VGG+ P KG T +++ PVF Sbjct: 1 MSVLVDKNTKVLVQGFTGKNGTFHSEQAIAY-GTNIVGGVTPGKGGTT----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA T A+ASVIYVP D+ IE+I++ + L+V ITEG+P LDM+ VK L+ Sbjct: 56 TMAEAVAATGADASVIYVPAPFVKDSAIEAIDSGVKLVVIITEGVPTLDMLVVKEYLKDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT++ G GQST Sbjct: 116 DVRVIGPNCPGVITPGQCKIGIMPGHIHQPGKVGIISRSGTLTYEAVAQTTKLGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G I+ L+L D TE+I+++GEIGG+AEEEAA+++K KP++ Sbjct: 176 IGIGGDPIPGMNQIEALKLLENDPQTEAIILIGEIGGTAEEEAAEYIKHNV----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAPPG+ MGHAGA+ISGGKG AE+K A + AGI SPA IG+ L E+ G Sbjct: 232 GYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAAFEAAGIAYTRSPAEIGKKLKEVTG 289 >gi|331656746|ref|ZP_08357708.1| succinyl-CoA synthetase subunit alpha [Escherichia coli TA206] gi|331054994|gb|EGI27003.1| succinyl-CoA synthetase subunit alpha [Escherichia coli TA206] Length = 289 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 218/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGAIASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 288 >gi|259909075|ref|YP_002649431.1| Succinyl-CoA synthetase, alpha subunit [Erwinia pyrifoliae Ep1/96] gi|224964697|emb|CAX56214.1| Succinyl-CoA synthetase, alpha subunit [Erwinia pyrifoliae Ep1/96] gi|283479101|emb|CAY75017.1| succinyl-CoA synthetase alpha chain [Erwinia pyrifoliae DSM 12163] gi|310767025|gb|ADP11975.1| Succinyl-CoA synthetase, alpha subunit [Erwinia sp. Ejp617] Length = 290 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDGILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP +CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGACKIGIMPGHIHQPGRIGIVSRSGTLTYEAVKQTTDIGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQDDPQTEAIVMIGEIGGSAEEEAAAFIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVL 288 >gi|237808970|ref|YP_002893410.1| succinyl-CoA synthetase, alpha subunit [Tolumonas auensis DSM 9187] gi|237501231|gb|ACQ93824.1| succinyl-CoA synthetase, alpha subunit [Tolumonas auensis DSM 9187] Length = 291 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 175/298 (58%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MSILINKETKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVSPGKGGSTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+A I LIVCITEGIP LDM++VK RL+++ Sbjct: 56 TVRDAVETTGATASVIYVPAPFCKDAILEAIDAGIQLIVCITEGIPTLDMLQVKCRLDET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMP I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPAHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A +K A++EAG+ S A I L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAAEKFAALEEAGVKTVRSLADIAVGLREVTG 289 >gi|304395710|ref|ZP_07377593.1| succinyl-CoA synthetase, alpha subunit [Pantoea sp. aB] gi|304357004|gb|EFM21368.1| succinyl-CoA synthetase, alpha subunit [Pantoea sp. aB] Length = 291 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 174/297 (58%), Positives = 218/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D I+E+IEA I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDGILEAIEAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHQPGRVGIVSRSGTLTYEAVKQTTDIGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQDDPQTEVIVMIGEIGGSAEEEAAAFIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVL 288 >gi|205352003|ref|YP_002225804.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205271784|emb|CAR36618.1| succinyl-CoA synthetase alpha chain [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627043|gb|EGE33386.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 289 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 171/297 (57%), Positives = 219/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQ I Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQEIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAII 288 >gi|324112301|gb|EGC06279.1| succinate-CoA ligase [Escherichia fergusonii B253] gi|325499640|gb|EGC97499.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Escherichia fergusonii ECD227] Length = 290 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 169/298 (56%), Positives = 220/298 (73%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+VLVQG+TGK GTFHTEQAI Y TQ+VGG+ P KG +++ PVF Sbjct: 1 MSVLINKHTRVLVQGITGKNGTFHTEQAIAY-GTQIVGGVTPGKGGQL----HLDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 ++ EA +T A+ASVIYVP D+++E+IE+ + LIV ITEG+P LDMV+V+ L+ Sbjct: 56 SMKEAMRQTEADASVIYVPAPFVLDSVVEAIESGVKLIVVITEGVPTLDMVKVRRLLDCH 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPGI+TP CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PDVRLIGPNCPGIITPGECKIGIMPGEIHRPGRIGIVSRSGTLTYEAVAQTTALGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FID L LF D T++++M+GEIGG+AEE AA+F++ E KP+ Sbjct: 176 CIGIGGDPVPGTNFIDALRLFENDPQTDAVIMIGEIGGNAEERAAEFIRHEM----NKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VG++AG TAP G+ MGHAGA+ISGG G AEDK A +AG+ +PA +G +L ++ Sbjct: 232 VGYIAGVTAPKGKRMGHAGAIISGGSGSAEDKFRAFDKAGMAWTRNPALLGETLWNVI 289 >gi|145533787|ref|XP_001452638.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124420337|emb|CAK85241.1| unnamed protein product [Paramecium tetraurelia] Length = 312 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 221/297 (74%), Gaps = 10/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFTT 61 + V+K+TKV+ QG+TG GTF TEQA+ Y T++VGG+ PKK GST+ + +PVF Sbjct: 18 VWVNKHTKVICQGITGNQGTFQTEQALNYF-TKMVGGVSPKKAGSTH-----LGLPVFKD 71 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 EAK T +ASVIYVPP A AIIE+IEA+I L+V IT+GIP DM++VK L S Sbjct: 72 CQEAKSATGCDASVIYVPPPTAASAIIEAIEAQIGLVVVITDGIPQHDMIKVKHALRSQS 131 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPGI+ P+ CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQST Sbjct: 132 VTRVIGPNCPGIIKPNECKIGIMPGYIHQNGKIGIVSRSGTLTYEAVDQTTRAGLGQSTV 191 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FIDVLE F+ D TE IVM+GEIGG EE AA ++K + KP+V Sbjct: 192 VGIGGDPFNGTNFIDVLERFMVDPETEGIVMIGEIGGENEEMAADWIKKN--NPKNKPVV 249 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPP R MGHAGA++S GKG A +KI A+++AGI + SPA+IG++++E++ Sbjct: 250 GFIAGITAPPERRMGHAGAIVSKGKGSAPEKIRALEQAGIRVVKSPAQIGKTMLEVM 306 >gi|121634761|ref|YP_975006.1| succinyl-CoA synthetase subunit alpha [Neisseria meningitidis FAM18] gi|120866467|emb|CAM10213.1| putative succinyl-CoA synthetase alpha subunit [Neisseria meningitidis FAM18] Length = 296 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 166/299 (55%), Positives = 225/299 (75%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG ++N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE + Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TPD CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPDECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVL 290 >gi|291616732|ref|YP_003519474.1| SucD [Pantoea ananatis LMG 20103] gi|291151762|gb|ADD76346.1| SucD [Pantoea ananatis LMG 20103] gi|327393158|dbj|BAK10580.1| succinyl-CoA synthetase alpha chain SucD [Pantoea ananatis AJ13355] Length = 291 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 219/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDGILEAIDAGIKLIITITEGIPTLDMLTVKMKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHQPGRVGIVSRSGTLTYEAVKQTTDIGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQDDPQTEAIVMIGEIGGSAEEEAAAFIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVL 288 >gi|195161054|ref|XP_002021385.1| GL25295 [Drosophila persimilis] gi|198465219|ref|XP_002134933.1| GA23751 [Drosophila pseudoobscura pseudoobscura] gi|194118498|gb|EDW40541.1| GL25295 [Drosophila persimilis] gi|198150062|gb|EDY73560.1| GA23751 [Drosophila pseudoobscura pseudoobscura] Length = 328 Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 173/294 (58%), Positives = 227/294 (77%), Gaps = 6/294 (2%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 ++KV+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF +VAEAK+ Sbjct: 37 DSKVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFASVAEAKK 91 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKSSSRLIG 126 T +A+VIYVPP GA AIIE+++AEIPLIVCITEG+P DMV+VK A + +S SRL+G Sbjct: 92 ATDPHATVIYVPPPGAAAAIIEALDAEIPLIVCITEGVPQHDMVKVKHALISQSKSRLVG 151 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ VGIGGD Sbjct: 152 PNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLCVGIGGD 211 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V F+AG Sbjct: 212 PFNGTDFIDCLEVFLKDPDTKGIILIGEIGGVAEEKAADYLTEFNTGIKAKPVVSFIAGV 271 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 272 SAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKEMKRL 325 >gi|26250849|ref|NP_756889.1| succinyl-CoA synthetase subunit alpha [Escherichia coli CFT073] gi|91213588|ref|YP_543574.1| SucD, succinyl-CoA synthetase subunit alpha [Escherichia coli UTI89] gi|110644397|ref|YP_672127.1| succinyl-CoA synthetase alpha subunit [Escherichia coli 536] gi|117626331|ref|YP_859654.1| succinyl-CoA synthetase alpha subunit [Escherichia coli APEC O1] gi|191171983|ref|ZP_03033528.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli F11] gi|215489396|ref|YP_002331827.1| predicted succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O127:H6 str. E2348/69] gi|218561134|ref|YP_002394047.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Escherichia coli S88] gi|300980467|ref|ZP_07175014.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 200-1] gi|300992978|ref|ZP_07180133.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 45-1] gi|301047015|ref|ZP_07194124.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 185-1] gi|306815830|ref|ZP_07449975.1| succinyl-CoA synthetase alpha chain [Escherichia coli NC101] gi|312965654|ref|ZP_07779883.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli 2362-75] gi|331650071|ref|ZP_08351144.1| succinate-CoA ligase, alpha subunit [Escherichia coli M605] gi|331660625|ref|ZP_08361557.1| succinate-CoA ligase, alpha subunit [Escherichia coli TA206] gi|26111280|gb|AAN83463.1|AE016770_263 Succinyl-CoA synthetase alpha chain [Escherichia coli CFT073] gi|91075162|gb|ABE10043.1| SucD, succinyl-CoA synthetase alpha chain [Escherichia coli UTI89] gi|110345989|gb|ABG72226.1| succinyl-CoA synthetase alpha subunit [Escherichia coli 536] gi|115515455|gb|ABJ03530.1| succinyl-CoA synthetase alpha subunit [Escherichia coli APEC O1] gi|190907748|gb|EDV67342.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli F11] gi|215267468|emb|CAS11922.1| predicted succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O127:H6 str. E2348/69] gi|218367903|emb|CAR05698.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Escherichia coli S88] gi|222035771|emb|CAP78516.1| SucD, succinyl-CoA synthetase alpha chain (EC62 15) [Escherichia coli LF82] gi|294491040|gb|ADE89796.1| succinyl-CoA synthetase, alpha subunit [Escherichia coli IHE3034] gi|300301060|gb|EFJ57445.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 185-1] gi|300307769|gb|EFJ62289.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 200-1] gi|300406752|gb|EFJ90290.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 45-1] gi|305850805|gb|EFM51261.1| succinyl-CoA synthetase alpha chain [Escherichia coli NC101] gi|307629113|gb|ADN73417.1| succinyl-CoA synthetase alpha chain [Escherichia coli UM146] gi|312289628|gb|EFR17519.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli 2362-75] gi|312948636|gb|ADR29463.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Escherichia coli O83:H1 str. NRG 857C] gi|315291542|gb|EFU50902.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 153-1] gi|315297530|gb|EFU56809.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 16-3] gi|320193418|gb|EFW68055.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Escherichia coli WV_060327] gi|323190078|gb|EFZ75356.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli RN587/1] gi|323950392|gb|EGB46273.1| succinate-CoA ligase [Escherichia coli H252] gi|324007783|gb|EGB77002.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 57-2] gi|324014860|gb|EGB84079.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 60-1] gi|330908384|gb|EGH36903.1| succinyl-CoA ligase [ADP-forming] alpha chain [Escherichia coli AA86] gi|331041016|gb|EGI13173.1| succinate-CoA ligase, alpha subunit [Escherichia coli M605] gi|331051667|gb|EGI23706.1| succinate-CoA ligase, alpha subunit [Escherichia coli TA206] Length = 290 Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 168/298 (56%), Positives = 220/298 (73%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+VLVQG+TGK GTFHTEQAI Y TQ+VGG+ P KG +++ PVF Sbjct: 1 MSVLINKHTRVLVQGITGKNGTFHTEQAIAY-GTQIVGGVTPGKGGQR----HLDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 ++ EA +T A+ASVIYVP D+++E+IEA + L+V ITEG+P LDMV+V+ L+ Sbjct: 56 SMKEAMRQTEADASVIYVPAPFVLDSVVEAIEAGVKLVVVITEGVPTLDMVKVRRLLDCH 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++TP CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PDVRLIGPNCPGVITPGECKIGIMPGEIHRPGRIGIVSRSGTLTYEAVAQTTALGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FID L LF D T++++M+GEIGG+AEE AA+F++ E KP+ Sbjct: 176 CIGIGGDPVPGTNFIDALRLFENDPQTDAVIMIGEIGGNAEERAAEFIRHEM----NKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VG++AG TAP G+ MGHAGA+ISGG G AEDK A +AG+ +PA +G +L ++ Sbjct: 232 VGYIAGVTAPKGKRMGHAGAIISGGSGSAEDKFRAFDKAGMAWTRNPALLGETLWNVI 289 >gi|302187416|ref|ZP_07264089.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. syringae 642] Length = 293 Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 172/298 (57%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T ++N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVETTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVVLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|325115637|emb|CBZ51192.1| 2-oxoglutarate dehydrogenase E1 component,related [Neospora caninum Liverpool] Length = 361 Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 178/326 (54%), Positives = 224/326 (68%), Gaps = 34/326 (10%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHP-KKGSTYWTG-GNVNVPVFT 60 + VDKNT+V+ QGLTGK G+FHTEQ + Y TQ VGG++P KKGST+ + G ++PVF Sbjct: 33 VFVDKNTRVICQGLTGKQGSFHTEQCLAY-GTQFVGGVNPSKKGSTWQSSDGKFSLPVFG 91 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEK 119 +V EAKE T +AS+I+VPP A AI++ I EIPL VCITEGIP DMVRVK A L + Sbjct: 92 SVKEAKEATGCDASMIFVPPPFAAKAIMDCIAEEIPLAVCITEGIPQQDMVRVKQALLSQ 151 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRS-------------------- 159 + +RLIGPNCPGI+ P CKIGIMPG I KG + S Sbjct: 152 TKTRLIGPNCPGIIKPGECKIGIMPGYIHSKGKIASNDESITTAMLIWIGQRCGDRASAH 211 Query: 160 --------GTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 GTLTYEAV QT+Q GLGQST VGIGGDP GT FID LE F+ D T+ IV+ Sbjct: 212 SWLNEKKTGTLTYEAVNQTTQTGLGQSTCVGIGGDPFNGTNFIDCLERFVNDPETKGIVL 271 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDK 271 +GEIGGSAEEEAA +LK+ K +KP+V F+AG TAPPGR MGHAGA++SGGKG AE K Sbjct: 272 IGEIGGSAEEEAAAWLKEHNK--EQKPVVSFIAGLTAPPGRRMGHAGAIVSGGKGTAEGK 329 Query: 272 INAMKEAGICIAPSPARIGRSLVELL 297 I A+++AG+ + +PA +G+ ++E++ Sbjct: 330 IAALEDAGVHVVRNPAAMGQKMLEVM 355 >gi|183598179|ref|ZP_02959672.1| hypothetical protein PROSTU_01558 [Providencia stuartii ATCC 25827] gi|188020346|gb|EDU58386.1| hypothetical protein PROSTU_01558 [Providencia stuartii ATCC 25827] Length = 290 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 219/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHMPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPQTEAIVMIGEIGGNAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKSML 288 >gi|255546904|ref|XP_002514510.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial precursor, putative [Ricinus communis] gi|223546409|gb|EEF47910.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial precursor, putative [Ricinus communis] Length = 334 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 187/296 (63%), Positives = 228/296 (77%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF TV Sbjct: 40 VFVDKNTRVICQGITGKNGTFHTEQAIEY-GTTMVGGVTPKKGGTEHLG----LPVFNTV 94 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 AEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMVRVKA L + S Sbjct: 95 AEAKAETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSK 154 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 155 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCV 214 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D +E FLAD TE I+++GEIGG+AEE+AA +K+ G KPIV Sbjct: 215 GIGGDPFNGTNFVDCIEKFLADPQTEGIILIGEIGGTAEEDAAALIKES---GTDKPIVA 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DKI +KEAG+ + SPA+IG +++++ Sbjct: 272 FIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLKEAGVTVVESPAKIGVAMLDVF 327 >gi|87308499|ref|ZP_01090640.1| putative succinyl-CoA synthetase alpha subunit [Blastopirellula marina DSM 3645] gi|87289056|gb|EAQ80949.1| putative succinyl-CoA synthetase alpha subunit [Blastopirellula marina DSM 3645] Length = 291 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 166/293 (56%), Positives = 224/293 (76%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG+TG+ G FHT+ + Y T++VGG+ P KG G +PV+ Sbjct: 1 MSILINKDTKVICQGITGRVGGFHTKGCLEY-GTKMVGGVTPGKGGQQVEG----LPVWD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A++I+VPP+G DAI+E+++A+I +I+ ITEG+PVLDMV V ++ S Sbjct: 56 TVEEAVAATGCEATMIFVPPAGTADAILEALDAKIKVIIAITEGVPVLDMVPVYEKVRAS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV+Q + GLGQST Sbjct: 116 DSVLIGPNCPGVITPEECKIGIMPGYIHKKGPVGVMSRSGTLTYEAVWQLTSLGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ GT FID+L++F AD ATE+I+M+GEIGG+AEEEAA+F+K KP+ Sbjct: 176 VGLGGDPIVGTSFIDLLKMFQADGATEAIMMMGEIGGTAEEEAAEFIKANV----DKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG+TAPPG+ MGHAGA+ISGGKG A++K A++ AG+ IA SPA +G +L Sbjct: 232 AFIAGRTAPPGKRMGHAGAIISGGKGTADEKFAALRAAGVEIAESPADMGTAL 284 >gi|238926407|ref|ZP_04658167.1| succinate--CoA ligase (ADP-forming) [Selenomonas flueggei ATCC 43531] gi|238885811|gb|EEQ49449.1| succinate--CoA ligase (ADP-forming) [Selenomonas flueggei ATCC 43531] Length = 301 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 163/298 (54%), Positives = 226/298 (75%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN-VPVF 59 MS+++DK+TKV+VQG+TGKA FHT+Q + Y T++VGG+ P K G +V+ VPVF Sbjct: 1 MSVMIDKDTKVIVQGITGKAAMFHTQQMLDY-GTKIVGGVTPGKA-----GQDVHGVPVF 54 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVA+A + T A ASVIYVP A D+I+E+++AE+ L+VCITE IPVLDMV+V+ ++ Sbjct: 55 NTVADAVKATGATASVIYVPARFAADSILEAVDAELDLVVCITEHIPVLDMVKVRRYMQG 114 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPG+LT K+GI PG++ + G VG++SRSGTLTYEA FQ + G+GQ+T Sbjct: 115 KKTRLVGPNCPGLLTAQQSKLGITPGTVSKPGHVGLISRSGTLTYEAAFQLTNAGIGQTT 174 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPVKGT+FID L+LF D T +++++GEIGG+AEE+AA+++K+ KP+ Sbjct: 175 TVGIGGDPVKGTDFIDALQLFKDDPDTYAVLIIGEIGGTAEEDAAKWIKENMPN---KPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+ APPG+ MGHAGA+ISGGKG A DK+ A+ AGI +A + A IG ++V+LL Sbjct: 232 SAFIAGRQAPPGKRMGHAGAIISGGKGTAADKVAALNAAGIPVADTVAHIGETMVKLL 289 >gi|225718040|gb|ACO14866.1| Succinyl-CoA ligase subunit alpha, mitochondrial precursor [Caligus clemensi] Length = 327 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 229/298 (76%), Gaps = 6/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 +++++ K++KV+ QG TGK GTFH++QAI Y T +VGG+ PKK T G +PVF Sbjct: 29 VNMMLTKDSKVICQGFTGKQGTFHSQQAIEY-GTNMVGGVSPKKAGTTHLG----LPVFG 83 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 +V EA A+A+VIYVPP GA AI+E+I+AE+PLIVCITEG+P DMV+V +L+ + Sbjct: 84 SVKEAMTEVKADATVIYVPPPGAAAAILEAIDAEVPLIVCITEGVPQHDMVKVIRKLKNQ 143 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S+LIGPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT+Q GLGQ+ Sbjct: 144 DKSKLIGPNCPGIIAPNKCKIGIMPGHIHQEGCIGVVSRSGTLTYEAVHQTTQVGLGQTL 203 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT FID L++FL D AT+ I+M+GEIGG+AEE AA++L + +KP+ Sbjct: 204 CVGIGGDPFNGTNFIDCLDIFLKDPATKGIIMIGEIGGAAEEHAAEYLMEHNSGPNQKPV 263 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V F+AG TAPPGR MGHAGA+ISGGKG A+ KI A++ AG+ + PSPA++G +LV+L+ Sbjct: 264 VSFIAGVTAPPGRRMGHAGAIISGGKGTAQTKIAALEAAGVGVTPSPAQMGTTLVKLM 321 >gi|260886824|ref|ZP_05898087.1| succinyl-CoA synthetase subunit alpha [Selenomonas sputigena ATCC 35185] gi|330839370|ref|YP_004413950.1| succinyl-CoA synthetase, alpha subunit [Selenomonas sputigena ATCC 35185] gi|260863423|gb|EEX77923.1| succinyl-CoA synthetase subunit alpha [Selenomonas sputigena ATCC 35185] gi|329747134|gb|AEC00491.1| succinyl-CoA synthetase, alpha subunit [Selenomonas sputigena ATCC 35185] Length = 301 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 161/297 (54%), Positives = 223/297 (75%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DK+TKV+VQG+TGKA TFHT+Q + Y ++V G+ P K G VPVF Sbjct: 1 MSVLIDKDTKVIVQGITGKAATFHTKQMLDY-GAKIVAGVTPGKAGQKVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A ASV+YVPP A D+I+E+++A++ L+VCITE IPVLDMV+V+ +E Sbjct: 56 TVADAVKATGATASVVYVPPRFAADSIMEAVDADLDLVVCITEHIPVLDMVKVRRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG+LT K+GI P ++ + G VG++SRSGTLTYEA FQ + G+GQ+T Sbjct: 116 KTRLVGPNCPGLLTSKQSKLGITPATVSKPGHVGVISRSGTLTYEAAFQLTNAGIGQTTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGT+FID L+LF D T +++++GEIGG+AEE+AA+++++ K KP+ Sbjct: 176 VGIGGDPVKGTDFIDALQLFKDDPDTYAVLIIGEIGGTAEEDAAKWIQENMK---DKPVS 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+ APPG+ MGHAGA+ISGGKG A DK+ A+ AGI +A + A IG ++V+LL Sbjct: 233 AFIAGRQAPPGKRMGHAGAIISGGKGTAADKVAALNAAGIPVADTVAHIGETMVKLL 289 >gi|254369721|ref|ZP_04985731.1| hypothetical protein FTAG_01047 [Francisella tularensis subsp. holarctica FSC022] gi|157122680|gb|EDO66809.1| hypothetical protein FTAG_01047 [Francisella tularensis subsp. holarctica FSC022] Length = 290 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 172/298 (57%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKVLVQG TGK GTFH+EQAI Y T +VGG+ P KG T +++ PVF Sbjct: 1 MSVLVDKNTKVLVQGFTGKNGTFHSEQAIAY-GTNIVGGVTPGKGGTT----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA T A+ASVIYVP D+ IE+I++ + L+V ITEG+P LDM+ VK L+ Sbjct: 56 TMAEAVAATDADASVIYVPAPFVKDSAIEAIDSGVKLVVIITEGVPTLDMLVVKEYLKDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPGI+TP CKIGIMPG I KG VGI+SRSGTLTYEAV QT++ GQST Sbjct: 116 DVRVIGPNCPGIITPGECKIGIMPGHIHMKGKVGIISRSGTLTYEAVAQTTKLSFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G I+ L+L D TE+I+++GEIGG+AEEEAA+++K KP++ Sbjct: 176 IGIGGDPIPGMNQIEALKLLENDPQTEAIILIGEIGGTAEEEAAEYIKHNV----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAPPG+ MGHAGA+ISGGKG AE+K A + AGI SPA IG+ L E+ G Sbjct: 232 GYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAAFEAAGIAYTRSPAEIGKKLKEVTG 289 >gi|323158778|gb|EFZ44791.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli E128010] Length = 289 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 217/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLVDIGEALKTVL 288 >gi|4512118|gb|AAD21623.1| succinyl-CoA synthetase alpha subunit [Pseudomonas aeruginosa PAO1] Length = 295 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+ I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKEAVEATGAEASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+ F D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKRFQEDPQTEAIVMIGEIGGSAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|330973463|gb|EGH73529.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. aceris str. M302273PT] Length = 293 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T ++N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+ + I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVDTTGATASVIYVPAPFCKDSILEAAFSGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVVLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|225024310|ref|ZP_03713502.1| hypothetical protein EIKCOROL_01185 [Eikenella corrodens ATCC 23834] gi|224942895|gb|EEG24104.1| hypothetical protein EIKCOROL_01185 [Eikenella corrodens ATCC 23834] Length = 296 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 167/299 (55%), Positives = 223/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQAI Y T+VVGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQAIAYG-TKVVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE + Sbjct: 56 TMNEAVRETGADASVIYVPAPFVLDSIVEAVDSGVKLVVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGKIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF AD TE+I+++GEIGG+AEEEAA+F++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFEADPQTEAIILIGEIGGTAEEEAAEFIQSNV----SKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AG+ SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFRAFEKAGVAYTRSPAELGSTMLEVL 290 >gi|323143444|ref|ZP_08078127.1| succinate-CoA ligase, alpha subunit [Succinatimonas hippei YIT 12066] gi|322416729|gb|EFY07380.1| succinate-CoA ligase, alpha subunit [Succinatimonas hippei YIT 12066] Length = 292 Score = 329 bits (843), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 170/299 (56%), Positives = 223/299 (74%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+ QG+TG GT H+EQ + Y T++VGG+ P +G + ++ +PVF Sbjct: 1 MSILVNKDTKVICQGITGSQGTAHSEQCLAY-GTKLVGGVTPGRGGS----SHLGLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A S+I+VPP A D+I E+I+A I LIVCITEGIPVLDM+RVKARL +S Sbjct: 56 TVREAVEVTQATTSMIFVPPPFAADSIFEAIDAGIELIVCITEGIPVLDMLRVKARLRES 115 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RLIGPNCPGI+TP CK+GIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GKTRLIGPNCPGIVTPGECKVGIMPGYIHTPGKVGIVSRSGTLTYEAVKQTTDAGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP++G+ F+D+L+LF D TE++VMVGEIGG+AE++AA ++K+ KP+ Sbjct: 176 CVGIGGDPIQGSNFVDMLKLFEEDPQTEAVVMVGEIGGTAEQDAAMWIKEH----MTKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG TAP G+ MGHAGA+I+GG+G A+ K A++EAG+ + P+ A I L E G Sbjct: 232 VSYIAGSTAPQGQRMGHAGAIITGGQGTAQAKQKALREAGVTVVPTAADIADGLREATG 290 >gi|300926131|ref|ZP_07141944.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 182-1] gi|300417830|gb|EFK01141.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 182-1] Length = 289 Score = 329 bits (843), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 217/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGTTASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 288 >gi|328849709|gb|EGF98884.1| hypothetical protein MELLADRAFT_45876 [Melampsora larici-populina 98AG31] Length = 340 Score = 329 bits (843), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 168/301 (55%), Positives = 224/301 (74%), Gaps = 10/301 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + KNTKV+ QG TGK T+H ++A+ Y T+ VGG+ PKK + G +PVF + Sbjct: 39 NLRIHKNTKVICQGFTGKTATYHCKEALDY-GTKFVGGVSPKKAGQHHLG----LPVFGS 93 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A T +A+VIYVPP A DA+IE++E EI LIVCITEGIP D VR+ L+ +S Sbjct: 94 VKDAVRETRPDATVIYVPPPFAADAVIEAVENEIGLIVCITEGIPQQDEVRIAQVLKSQS 153 Query: 121 SSRLIGPNCPGILTPD---SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 SRL+GPNCPGI++PD CKIGIMP +IF G +G++SRSGTLTYEAV QT++ GLGQ Sbjct: 154 KSRLVGPNCPGIMSPDVGGGCKIGIMPSNIFSPGCIGVVSRSGTLTYEAVDQTTKVGLGQ 213 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK-RGRK 236 + VGIGGDP GT+ IDVL+ F+ D+AT+ IV++GEIGGS EEEAA+FLK K R Sbjct: 214 TLCVGIGGDPFPGTQHIDVLKAFMEDDATKGIVLIGEIGGSMEEEAAEFLKQYNKTRSVP 273 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ F+AG+TAPPGR MGHAGA+ISGGKG AEDK+ A++EAG ++ SPA++G +++ Sbjct: 274 KPVISFIAGRTAPPGRRMGHAGAIISGGKGKAEDKVKALEEAGAVVSDSPAKLGALMLKA 333 Query: 297 L 297 + Sbjct: 334 M 334 >gi|294637431|ref|ZP_06715722.1| succinyl-CoA synthetase subunit alpha [Edwardsiella tarda ATCC 23685] gi|291089424|gb|EFE21985.1| succinyl-CoA synthetase subunit alpha [Edwardsiella tarda ATCC 23685] Length = 290 Score = 329 bits (843), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 171/299 (57%), Positives = 223/299 (74%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K T+V+ QG TG GTFH+EQA+ Y +Q+VGG+ P KG + G +PVF Sbjct: 1 MSILINKETRVICQGFTGSQGTFHSEQALAY-GSQLVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + TAA+ASVIYVP D+I+E+I+A I LI+CITEGIP DM+ VKA+L++ Sbjct: 56 TVREAVQATAASASVIYVPAPFCKDSILEAIDAGITLIICITEGIPTQDMLLVKAKLDQC 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QTS GLGQST Sbjct: 116 PGVRMIGPNCPGVITPGECKIGIMPGHIHQPGRIGIVSRSGTLTYEAVKQTSDVGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ G+ FID+L LF AD T++IVM+GEIGG+AEEEAA ++K KP+ Sbjct: 176 CVGIGGDPIPGSSFIDILALFQADPQTDAIVMIGEIGGNAEEEAAAYIKQHV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG++L+ +LG Sbjct: 232 VAYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVTTVRSLADIGQALLRVLG 290 >gi|93004946|ref|YP_579383.1| succinyl-CoA synthetase, alpha subunit [Psychrobacter cryohalolentis K5] gi|92392624|gb|ABE73899.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Psychrobacter cryohalolentis K5] Length = 291 Score = 328 bits (842), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 173/299 (57%), Positives = 217/299 (72%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DK+TKVLVQG TGK GTFH+EQAI Y T+VVGG+ P KG G +PVF Sbjct: 1 MSVLIDKDTKVLVQGFTGKNGTFHSEQAIEYG-TKVVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T++EA T A+ASVIYVP D+IIE+I+A + LIV ITEG+P LDM++ K LE + Sbjct: 56 TMSEAMAATQADASVIYVPAPFVLDSIIEAIDAGVKLIVVITEGVPTLDMLKAKRYLETA 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT++ G GQST Sbjct: 116 GDVRLIGPNCPGVITPGQCKIGIMPGHIHLPGKVGIISRSGTLTYEAVAQTTKLGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G ID L+LF D TE+I+++GEIGG+AEEEAA ++KD KP+ Sbjct: 176 CIGIGGDPIPGMNQIDALKLFQEDPQTEAIILIGEIGGTAEEEAAAYIKDHV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VG++AG TAP G+ MGHAGA+ISGG+G AEDK A + AGI P+++G L E+ G Sbjct: 232 VGYIAGVTAPEGKRMGHAGAIISGGQGTAEDKFKAFEAAGIAYTRDPSKLGEKLKEVTG 290 >gi|237703621|ref|ZP_04534102.1| succinyl-CoA synthetase subunit alpha [Escherichia sp. 3_2_53FAA] gi|226901533|gb|EEH87792.1| succinyl-CoA synthetase subunit alpha [Escherichia sp. 3_2_53FAA] gi|315287843|gb|EFU47245.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 110-3] gi|323954474|gb|EGB50258.1| succinate-CoA ligase [Escherichia coli H263] Length = 290 Score = 328 bits (842), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 168/298 (56%), Positives = 220/298 (73%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+VLVQG+TGK GTFHTEQAI Y TQ+VGG+ P KG +++ PVF Sbjct: 1 MSVLINKHTRVLVQGITGKNGTFHTEQAIAY-GTQIVGGVTPGKGGQR----HLDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 ++ EA +T A+ASVIYVP D+++E+IEA + L+V ITEG+P LDMV+V+ L+ Sbjct: 56 SMKEAMPQTEADASVIYVPAPFVLDSVVEAIEAGVKLVVVITEGVPTLDMVKVRRLLDCH 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++TP CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PDVRLIGPNCPGVITPGECKIGIMPGEIHRPGRIGIVSRSGTLTYEAVAQTTALGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FID L LF D T++++M+GEIGG+AEE AA+F++ E KP+ Sbjct: 176 CIGIGGDPVPGTNFIDALRLFENDPQTDAVIMIGEIGGNAEERAAEFIRHEM----NKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VG++AG TAP G+ MGHAGA+ISGG G AEDK A +AG+ +PA +G +L ++ Sbjct: 232 VGYIAGVTAPKGKRMGHAGAIISGGSGSAEDKFRAFDKAGMAWTRNPALLGETLWNVI 289 >gi|312375154|gb|EFR22577.1| hypothetical protein AND_14503 [Anopheles darlingi] Length = 465 Score = 328 bits (842), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 178/324 (54%), Positives = 232/324 (71%), Gaps = 30/324 (9%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ N+KV+ QG TGK GTFH++QAI Y TQ+VGG+ P KG +++ PVF T Sbjct: 144 NLKLNSNSKVICQGFTGKQGTFHSQQAIEY-GTQLVGGVSPGKGGR----THLDRPVFNT 198 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 VAEAK+ T A ASVIYVPP GA AI+ESIEAE+PLIVCITEG+P DMV+VK A L +S Sbjct: 199 VAEAKKATGAEASVIYVPPPGAAKAIMESIEAEMPLIVCITEGVPQHDMVKVKHALLAQS 258 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 259 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 318 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG------ 234 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE AA +L + Sbjct: 319 VGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEENAAAYLMQYNQVDSIDIDY 378 Query: 235 ------------------RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMK 276 + KP+V F+AG +APPGR MGHAGA+ISGGKGGA+DKINA++ Sbjct: 379 DNGCGRLSNSIFLPLQGIKAKPVVSFIAGLSAPPGRRMGHAGAIISGGKGGAQDKINALE 438 Query: 277 EAGICIAPSPARIGRSLVELLGSL 300 +AG+ + SPA++G+ L + + L Sbjct: 439 KAGVIVTRSPAQMGKELFKEMKRL 462 >gi|320169175|gb|EFW46074.1| succinate-CoA ligase [Capsaspora owczarzaki ATCC 30864] Length = 318 Score = 328 bits (842), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 174/290 (60%), Positives = 223/290 (76%), Gaps = 9/290 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L++K+TKV+ QG TGK GTFH+EQA+LY T++VGG+ P K G +PVF Sbjct: 25 NLLINKDTKVICQGFTGKQGTFHSEQALLY-GTKMVGGVSPAKAGQQHLG----LPVFKD 79 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 V +A + T A+A+VIYVPP A AI E+IEAEIPL VCITEGIP DMV+VK A L ++ Sbjct: 80 VKDAVKATGAHATVIYVPPPFAAGAIFEAIEAEIPLAVCITEGIPQQDMVKVKNALLSQN 139 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ PD CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 140 KTRLVGPNCPGIIKPDECKIGIMPGHIHKRGNIGIVSRSGTLTYEAVAQTTAVGLGQSLC 199 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D L++FL D T+ I+++GEIGGSAEEEAA++LK+ KKP+V Sbjct: 200 VGIGGDPFNGTNFVDCLDIFLNDPETKGIILIGEIGGSAEEEAAEYLKNHK---IKKPVV 256 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 F+AG+TAPPGR MGHAGA+ISGGKGGA+ KI A+ AG+ + SPA++G Sbjct: 257 SFIAGRTAPPGRRMGHAGAIISGGKGGADAKIAALHSAGVTVVDSPAQMG 306 >gi|78191458|gb|ABB29950.1| succinyl-CoA ligase alpha 1 subunit-like [Solanum tuberosum] Length = 262 Score = 328 bits (842), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 170/263 (64%), Positives = 204/263 (77%), Gaps = 8/263 (3%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 +VGG+ PKKG T G +PVF TVAEAK T ANASVIYVPP A AI+E +EAE+ Sbjct: 1 MVGGVTPKKGGTEHLG----LPVFNTVAEAKAETKANASVIYVPPPFAAAAIMEGLEAEL 56 Query: 96 PLIVCITEGIPVLDMVRVKARLEKSS-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 LIVCITEGIP DMVRVKA L+K S +RLIGPNCPGI+ P CKIGIMPG I + G +G Sbjct: 57 DLIVCITEGIPQHDMVRVKAALKKQSRTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIG 116 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 I+SRSGTLTYEAVFQT+ GLGQST VGIGGDP GT F+D LE F+AD TE IV++GE Sbjct: 117 IVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFIADPQTEGIVLIGE 176 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 IGG+AEE+AA +K+ G +KP+V F+AG TAPPGR MGHAGA++SGGKG A+DKI A Sbjct: 177 IGGTAEEDAAALIKES---GTQKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKA 233 Query: 275 MKEAGICIAPSPARIGRSLVELL 297 +KEAG+ + SPA+IG S++E+ Sbjct: 234 LKEAGVTVCESPAKIGVSMLEVF 256 >gi|229596684|ref|XP_001007751.3| succinyl-CoA synthetase, alpha subunit family protein [Tetrahymena thermophila] gi|225565165|gb|EAR87506.3| succinyl-CoA synthetase, alpha subunit family protein [Tetrahymena thermophila SB210] Length = 310 Score = 328 bits (842), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 169/297 (56%), Positives = 220/297 (74%), Gaps = 10/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFTT 61 + ++K+TKV+ QG+TG GT HT+QA+ Y T++VGG++P K G T+ + +PVF Sbjct: 17 VWINKHTKVICQGITGNQGTLHTQQALEY-GTKMVGGVNPAKAGQTH-----LGLPVFKN 70 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 EAK+ T +ASVIYVPP A AI+E+IEAEIPL+V IT+GIP DMV+VK L + Sbjct: 71 CQEAKKVTGCDASVIYVPPPHAAKAIMEAIEAEIPLVVVITDGIPQHDMVKVKHALRQQK 130 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPGI+ P+ CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQST Sbjct: 131 ITRIIGPNCPGIIKPNECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVDQTTKAGLGQSTV 190 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FIDVLE F+ D TE I+++GEIGG AEE+AA +LK A KP+V Sbjct: 191 VGIGGDPFNGTNFIDVLERFVEDPETEGILLIGEIGGEAEEQAAAWLK--ANNKTNKPVV 248 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPP R MGHAGA++SGGKG A +KI A++ AGI + SPA +G+ ++ L+ Sbjct: 249 SFIAGVTAPPERRMGHAGAIVSGGKGSATEKIKALESAGIKVCRSPATLGQEMLNLM 305 >gi|156088999|ref|XP_001611906.1| succinyl-CoA synthetase, alpha subunit family protein [Babesia bovis] gi|154799160|gb|EDO08338.1| succinyl-CoA synthetase, alpha subunit family protein [Babesia bovis] Length = 328 Score = 328 bits (842), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 161/299 (53%), Positives = 223/299 (74%), Gaps = 7/299 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW--TGGNVNVPVFT 60 + VDKNTK++ QGLTGK G+ H E + Y T+ VGG++PKK T W + G ++PV++ Sbjct: 31 VYVDKNTKIICQGLTGKQGSLHAEGCMNYYNTKFVGGVNPKKAGTMWQCSEGKHSLPVYS 90 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEAK+ T A+A+VI+VPP A +IIE++EAE+PLI+CITEGIP +M++VK+ + Sbjct: 91 SVAEAKKETGADATVIFVPPPSAAGSIIEAVEAEMPLIICITEGIPQHEMIKVKSIISDP 150 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + S+LIGPNCPGI+ P+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 151 ACKSKLIGPNCPGIIKPEECKIGIMPGHIHKRGCIGIVSRSGTLTYEAVTQTTSNGLGQS 210 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GIGGDP G FIDVL+ F+ D T+ I+++GEIGG+AEE+AA+++K KP Sbjct: 211 VCIGIGGDPFGGLTFIDVLKKFVDDPQTKGIMLIGEIGGNAEEDAAEWIKANP---TDKP 267 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 IV +AG APPGR MGHAGA+ISG G A+ KI A+++AG+ +A +PA +G ++ + L Sbjct: 268 IVALIAGTCAPPGRRMGHAGAIISGNTGTAQGKIKALRDAGVVVAETPALLGSTMKKEL 326 >gi|28869405|ref|NP_792024.1| succinyl-CoA synthase subunit alpha [Pseudomonas syringae pv. tomato str. DC3000] gi|213968180|ref|ZP_03396325.1| succinyl-CoA synthase, alpha subunit [Pseudomonas syringae pv. tomato T1] gi|301383815|ref|ZP_07232233.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. tomato Max13] gi|302059593|ref|ZP_07251134.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. tomato K40] gi|302133382|ref|ZP_07259372.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28852646|gb|AAO55719.1| succinyl-CoA synthase, alpha subunit [Pseudomonas syringae pv. tomato str. DC3000] gi|213927160|gb|EEB60710.1| succinyl-CoA synthase, alpha subunit [Pseudomonas syringae pv. tomato T1] gi|330875692|gb|EGH09841.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|331018593|gb|EGH98649.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 293 Score = 328 bits (842), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T ++N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVDTTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVILIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|71734822|ref|YP_274208.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485469|ref|ZP_05639510.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624397|ref|ZP_06457351.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646689|ref|ZP_06478032.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. aesculi str. 2250] gi|71555375|gb|AAZ34586.1| succinyl-CoA synthetase, alpha subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|320324900|gb|EFW80972.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. glycinea str. B076] gi|320329266|gb|EFW85263.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. glycinea str. race 4] gi|330867449|gb|EGH02158.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330888159|gb|EGH20820.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. mori str. 301020] gi|330987446|gb|EGH85549.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. lachrymans str. M301315] Length = 293 Score = 328 bits (842), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T ++N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVDTTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVILIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|297623490|ref|YP_003704924.1| succinyl-CoA synthetase subunit alpha [Truepera radiovictrix DSM 17093] gi|297164670|gb|ADI14381.1| succinyl-CoA synthetase, alpha subunit [Truepera radiovictrix DSM 17093] Length = 312 Score = 328 bits (842), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 168/305 (55%), Positives = 216/305 (70%), Gaps = 29/305 (9%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK---------------- 44 MSILV K+TK+LVQG+ G G FH ++++ Y TQVVG +HP + Sbjct: 1 MSILVGKDTKLLVQGI-GNFGRFHADRSVAY-GTQVVGAVHPSRAGQTEVFEGETDHSGV 58 Query: 45 ---GSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCI 101 G TY VP+F +V EA E T ANASV++VP A DAI+E+ EA +PL++CI Sbjct: 59 PGRGDTY----RAEVPIFFSVKEAVEATGANASVVFVPAPFAADAIMEAAEAGLPLVICI 114 Query: 102 TEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGT 161 TEGIP++DMVRVK L +RLIGPNCPG++TP C+IGIMPG I R G +G++SRSGT Sbjct: 115 TEGIPIMDMVRVKRYLADKPTRLIGPNCPGVITPHECRIGIMPGYIHRAGRIGVVSRSGT 174 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 LTYEAV Q +Q GLGQ+TAVGIGGDPV GT F+DVL++F D TE ++M+GEIGG+AEE Sbjct: 175 LTYEAVHQLTQNGLGQTTAVGIGGDPVNGTNFVDVLKMFNDDPQTEGVIMIGEIGGTAEE 234 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +AA ++ +KP+ GF+AG TAP G+ MGHAGA+ISGGKG A DKI A++ AG+ Sbjct: 235 DAAAWIASN----MQKPVAGFIAGTTAPKGKRMGHAGAIISGGKGTAADKIAALEAAGVV 290 Query: 282 IAPSP 286 IAP+P Sbjct: 291 IAPTP 295 >gi|195441492|ref|XP_002068543.1| GK20526 [Drosophila willistoni] gi|194164628|gb|EDW79529.1| GK20526 [Drosophila willistoni] Length = 328 Score = 328 bits (842), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 171/300 (57%), Positives = 231/300 (77%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF T Sbjct: 31 NLKLNGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAT 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 VAEAK+ T +A+VIYVPP GA AI+E+++AEIPLIVCITEG+P DMV+VK A + ++ Sbjct: 86 VAEAKKATDPHATVIYVPPPGAAAAILEALDAEIPLIVCITEGVPQHDMVKVKHALISQN 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPDTKGIILIGEIGGVAEEKAADYLTEFNTGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 266 SFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKEMKRL 325 >gi|94970900|ref|YP_592948.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Candidatus Koribacter versatilis Ellin345] gi|94552950|gb|ABF42874.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Candidatus Koribacter versatilis Ellin345] Length = 293 Score = 328 bits (842), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 177/298 (59%), Positives = 225/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNT+++VQGLTG+ GTFH + Y T+VVGG+ P KG T G P++ Sbjct: 1 MSILVDKNTRLIVQGLTGREGTFHAKACADYG-TKVVGGVTPGKGGTTHEG----WPIYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A ++T AN SVI+VPP A DAI+E+++AE+PL+VCITEGIP DMV+V ++ Sbjct: 56 TVSDAVQQTGANVSVIFVPPPFAADAIMEAVDAELPLVVCITEGIPAQDMVKVWDYMQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI++P KIGIMP I ++G VGI+SRSGTLTYEAV Q + G+GQSTA Sbjct: 116 KSRLIGPNCPGIISPGKAKIGIMPARIHKQGHVGIVSRSGTLTYEAVHQLTVRGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+LF D TE+I+M+GEIGG+AEE AA+F+K KKP+V Sbjct: 176 IGIGGDPIIGTNFIDALDLFNKDPETEAIIMIGEIGGNAEENAAEFVKANV----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+ISGGKG A +K AM+ AGI I SPA +G +LV+ G Sbjct: 232 GFIAGQTAPPGRRMGHAGAIISGGKGTAAEKFKAMEAAGIHIVKSPALLGETLVQATG 289 >gi|18655523|pdb|1JKJ|A Chain A, E. Coli Scs gi|18655525|pdb|1JKJ|D Chain D, E. Coli Scs gi|18655527|pdb|1JLL|A Chain A, Crystal Structure Analysis Of The E197betaa Mutant Of E. Coli Scs gi|18655529|pdb|1JLL|D Chain D, Crystal Structure Analysis Of The E197betaa Mutant Of E. Coli Scs Length = 288 Score = 328 bits (842), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 172/296 (58%), Positives = 217/296 (73%), Gaps = 9/296 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 SIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF T Sbjct: 1 SILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFNT 55 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 VREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST V Sbjct: 116 VRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+VG Sbjct: 176 GIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 YIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 287 >gi|331004889|ref|ZP_08328306.1| Succinyl-CoA ligase (ADP-forming) alpha chain [gamma proteobacterium IMCC1989] gi|330421343|gb|EGG95592.1| Succinyl-CoA ligase (ADP-forming) alpha chain [gamma proteobacterium IMCC1989] Length = 290 Score = 328 bits (841), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 172/298 (57%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MSILINKDTKVICQGFTGSNGTFHSEQAIAY-GTQMVGGVTPGKGGSTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP + D+IIE+ +A I LI+ ITEGIP LDM+ VK +EK Sbjct: 56 TVKEAVEATGATATVIYVPAAFCKDSIIEAADAGIELIITITEGIPTLDMLVVKEYVEKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGVVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D ATE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILQMFQDDPATEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA++SGGKG A++K A+++AG+ S A IG +L E+ G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIVSGGKGTADEKFAALEDAGVKTVRSLADIGSALKEITG 289 >gi|192360780|ref|YP_001981995.1| succinyl-CoA synthetase subunit alpha [Cellvibrio japonicus Ueda107] gi|190686945|gb|ACE84623.1| succinyl-CoA synthetase alpha chain [Cellvibrio japonicus Ueda107] Length = 290 Score = 328 bits (841), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 172/298 (57%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+ A I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVDATGAEASVIYVPAPFCKDSILEAANAGIKLIVCITEGIPTMDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF AD TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQADPQTEAIVMIGEIGGSAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A +K A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTAAEKFAALEDAGVKTVKSLADIGKALKEITG 289 >gi|66045253|ref|YP_235094.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. syringae B728a] gi|289679952|ref|ZP_06500842.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. syringae FF5] gi|63255960|gb|AAY37056.1| Succinyl-CoA ligase, alpha subunit [Pseudomonas syringae pv. syringae B728a] gi|330899191|gb|EGH30610.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. japonica str. M301072PT] gi|330940362|gb|EGH43467.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. pisi str. 1704B] gi|330951687|gb|EGH51947.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae Cit 7] Length = 293 Score = 328 bits (841), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T ++N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVDTTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVVLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|146282242|ref|YP_001172395.1| succinyl-CoA synthetase subunit alpha [Pseudomonas stutzeri A1501] gi|145570447|gb|ABP79553.1| succinyl-CoA synthetase alpha chain [Pseudomonas stutzeri A1501] Length = 294 Score = 328 bits (841), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTMHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A+ASVIYVP D+I+E+ I LIVCITEGIP LDM+ VK + ++ Sbjct: 56 TVREAVEATGADASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLEVKIKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGI PG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIQPGHIHMPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSTFIDILKLFQDDPQTEAIVMIGEIGGSAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG AE+K A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTAEEKFAALQDAGVKTVRSLADIGKALAEVTG 289 >gi|304438122|ref|ZP_07398065.1| succinyl-CoA synthetase subunit alpha [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368895|gb|EFM22577.1| succinyl-CoA synthetase subunit alpha [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 301 Score = 328 bits (840), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 161/297 (54%), Positives = 222/297 (74%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+++DK+TKV+VQG+TGKA FHT+Q + Y T++V G+ P K G VPVF Sbjct: 1 MSVMIDKDTKVIVQGITGKAAMFHTQQMLAY-GTKIVAGVTPGKAGQEVHG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A ASVIYVP A D+I+E+++AE+ L+VCITE IPVLDMV+V+ ++ Sbjct: 56 TVADAVKATGATASVIYVPARFAADSILEAVDAELDLVVCITEHIPVLDMVKVRRYMQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG+LT K+GI PG++ + G VG++SRSGTLTYEA FQ + G+GQ+T Sbjct: 116 KTRLVGPNCPGLLTSQQSKLGITPGTVSKPGHVGLISRSGTLTYEAAFQLTNAGIGQTTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGT+FID L+LF D T +++++GEIGG+AEE+AA+++K+ KP+ Sbjct: 176 VGIGGDPVKGTDFIDALQLFKDDPDTYAVLIIGEIGGTAEEDAAKWIKENMPN---KPVS 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+ APPG+ MGHAGA+ISGGKG A DK+ A+ AGI +A + A IG ++V+LL Sbjct: 233 AFIAGRQAPPGKRMGHAGAIISGGKGTAADKVAALNAAGIPVADTVAHIGETMVKLL 289 >gi|90021747|ref|YP_527574.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Saccharophagus degradans 2-40] gi|89951347|gb|ABD81362.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Saccharophagus degradans 2-40] Length = 290 Score = 328 bits (840), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 170/298 (57%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVL QG TG GTFH++QAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVLCQGFTGSQGTFHSQQAIEY-GTQMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA E T A+ASVIYVP D+I+E+ + + L+VCITEGIP LDM+ K + ++ Sbjct: 56 TMAEAVEATGADASVIYVPAPFCKDSILEAAHSGVKLVVCITEGIPTLDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDFGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F DE TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDEKTEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG +L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLAEIGNALKEITG 289 >gi|116749137|ref|YP_845824.1| succinyl-CoA synthetase subunit alpha [Syntrophobacter fumaroxidans MPOB] gi|116698201|gb|ABK17389.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Syntrophobacter fumaroxidans MPOB] Length = 293 Score = 328 bits (840), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 172/291 (59%), Positives = 211/291 (72%), Gaps = 9/291 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI VDKNT++LVQG+TG+ G FHT Y T VV G+ P KG G +PVF Sbjct: 1 MSIWVDKNTRLLVQGITGREGQFHTINCKAY-GTNVVAGVTPGKGGQAVEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T ANA++++VPP DAI+E+IEA IPLIV ITEGIPV+DM++VK L+ S Sbjct: 56 TVAKAVKETKANAAMVFVPPPFCADAILEAIEAGIPLIVAITEGIPVMDMMKVKNYLKSS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP CKIGI PG I G VGI+SRSGTLTYEAV Q + G+GQST Sbjct: 116 KSRLIGPNCPGIITPGQCKIGIQPGHIHTPGPVGIVSRSGTLTYEAVHQIGKVGIGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT FID L+ F D T++I+MVGEIGGSAEE+AA F+ K+ KP++ Sbjct: 176 IGIGGDPVNGTNFIDCLDAFQKDPQTKAIIMVGEIGGSAEEDAADFI----KKNVTKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 GF+AG TAPPGR MGHAGA+ISG G A+ KI AM+ AGI + S +G+ Sbjct: 232 GFIAGLTAPPGRRMGHAGAIISGSSGTAQGKIKAMRAAGITVVESLGDMGQ 282 >gi|148262239|ref|YP_001228945.1| succinyl-CoA synthetase, alpha subunit [Geobacter uraniireducens Rf4] gi|148265507|ref|YP_001232213.1| succinyl-CoA synthetase, alpha subunit [Geobacter uraniireducens Rf4] gi|146395739|gb|ABQ24372.1| succinyl-CoA synthetase, alpha subunit [Geobacter uraniireducens Rf4] gi|146399007|gb|ABQ27640.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Geobacter uraniireducens Rf4] Length = 290 Score = 328 bits (840), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 164/296 (55%), Positives = 220/296 (74%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG+TG G FH + A Y TQ+VGG+ P KG T G PV+ Sbjct: 1 MSILINKDTKVITQGITGATGLFHAQGAREY-GTQMVGGVTPGKGGTTIDG----FPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A ASVIYVPP A D+I+E+++A I L+ CITEGIPVLDMV+VK ++ Sbjct: 56 TVREAVLQTGATASVIYVPPPFAADSIMEAVDAGIELVCCITEGIPVLDMVKVKQYMKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CKIGIMPG I + G +G++SRSGTLTYEAV+Q + GLGQST Sbjct: 116 KTRLVGPNCPGVITPGQCKIGIMPGYIHKPGKIGVVSRSGTLTYEAVWQLTSLGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT +DVL++F AD TE+++M+GEIGG++EEE A F+K+ KP+ Sbjct: 176 VGIGGDPVNGTNHLDVLKMFEADPDTEAVIMIGEIGGTSEEEGAYFVKEH----MTKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++AG TAPPG+ MGHAGA+ISGGKG A +K+ ++E GI +A SPA + ++L+++ Sbjct: 232 AYIAGVTAPPGKRMGHAGAIISGGKGTATEKVAVLEECGISVAASPAEMAQALLKI 287 >gi|149928246|ref|ZP_01916490.1| succinyl-CoA synthetase alpha subunit [Limnobacter sp. MED105] gi|149823052|gb|EDM82293.1| succinyl-CoA synthetase alpha subunit [Limnobacter sp. MED105] Length = 295 Score = 328 bits (840), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 166/303 (54%), Positives = 224/303 (73%), Gaps = 12/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCREYANGKNCFVAGVNPKKAGEDFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TVA+AK++T ANASVIYVPP A AI E++EA++ L++CITEGIPV DM+ V+ R+ Sbjct: 57 YGTVADAKKQTGANASVIYVPPPFAAAAIWEAVEADLDLVICITEGIPVRDMIEVRDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + ++GPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q S+ GLG Sbjct: 117 REGRKTIVVGPNCPGVITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLSELGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QSTAVGIGGDPV G + IDV+ +F D T+++VM+GEIGGS EEEAA ++KD K Sbjct: 177 QSTAVGIGGDPVNGLKHIDVMRMFNDDPDTDAVVMIGEIGGSDEEEAALWVKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGGKG A++K+ M+E GI + P+ +G+ L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGAIISGGKGTAQEKLAIMEECGITVTKDPSVMGQLLKKA 292 Query: 297 LGS 299 +G+ Sbjct: 293 IGA 295 >gi|71064687|ref|YP_263414.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Psychrobacter arcticus 273-4] gi|71037672|gb|AAZ17980.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Psychrobacter arcticus 273-4] Length = 291 Score = 328 bits (840), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 173/299 (57%), Positives = 216/299 (72%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DK+TKVLVQG TGK GTFH+EQAI Y T+VVGG+ P KG G +PVF Sbjct: 1 MSVLIDKDTKVLVQGFTGKNGTFHSEQAIEYG-TKVVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T A+ASVIYVP D+IIE+I+A + LIV ITEG+P LDM++ K LE++ Sbjct: 56 TMNEAMAATQADASVIYVPAPFVLDSIIEAIDAGVKLIVVITEGVPTLDMLKAKRYLEEA 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GDVRLIGPNCPGVITPGQCKIGIMPGHIHLPGKVGIISRSGTLTYEAVAQTTTLGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G ID L+LF D TE+I+++GEIGG+AEEEAA ++KD KP+ Sbjct: 176 CIGIGGDPIPGMNQIDALKLFQEDPQTEAIILIGEIGGTAEEEAAAYIKDHV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VG++AG TAP G+ MGHAGA+ISGG+G AEDK A + AGI P+++G L E+ G Sbjct: 232 VGYIAGVTAPEGKRMGHAGAIISGGQGTAEDKFKAFEAAGIAYTRDPSKLGEKLKEVTG 290 >gi|301167410|emb|CBW26992.1| succinyl-CoA synthetase alpha chain [Bacteriovorax marinus SJ] Length = 291 Score = 328 bits (840), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 165/298 (55%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++++TK++ G TGK GTFH+ Q+ Y T VGG+ P KG T G PVF Sbjct: 1 MAILINRDTKLITVGFTGKQGTFHSLQSRDY-GTNFVGGVTPGKGGTVHEG----FPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T ANA++I VPP A D+I+E I+A +PL++ ITEGIP++DMV+VKA L+ S Sbjct: 56 TVKEAVDKTEANAAMIMVPPPFAADSILECIDAGMPLVIAITEGIPIVDMVKVKAALKDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAVFQ +Q +GQST Sbjct: 116 NTRLIGPNCPGLITPGECKIGIMPGHIHMPGKVGVVSRSGTLTYEAVFQLTQRDIGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELF D TE+++M+GEIGG+AE +A +++ ++ KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLELFEKDPDTEAVIMIGEIGGNAETDAGRWI----QKNMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG +AP G+ MGHAGA+ISGG AE K ++E G+ IA SPA +G + E+LG Sbjct: 232 SFIAGASAPAGKRMGHAGAIISGGDDTAEAKFRILEECGVTIARSPAELGHKMEEVLG 289 >gi|218460668|ref|ZP_03500759.1| succinyl-CoA synthetase subunit alpha [Rhizobium etli Kim 5] Length = 192 Score = 328 bits (840), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 156/190 (82%), Positives = 180/190 (94%) Query: 108 LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 +DMVRVKARL++S SRL+GPNCPGILTP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAV Sbjct: 1 MDMVRVKARLDRSKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAV 60 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 FQTS EGLGQ+TAVGIGGDPVKGTEFIDVLE+FLADEAT+SI+M+GEIGGSAEE+AAQFL Sbjct: 61 FQTSNEGLGQTTAVGIGGDPVKGTEFIDVLEMFLADEATQSIIMIGEIGGSAEEDAAQFL 120 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 KDEAK+GRKKP+ GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPA Sbjct: 121 KDEAKKGRKKPMAGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIRVSPSPA 180 Query: 288 RIGRSLVELL 297 R+G++LVE+L Sbjct: 181 RLGKTLVEVL 190 >gi|195375548|ref|XP_002046562.1| GJ12416 [Drosophila virilis] gi|194153720|gb|EDW68904.1| GJ12416 [Drosophila virilis] Length = 328 Score = 328 bits (840), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 171/300 (57%), Positives = 230/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLNGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+ T +A+VIYVPP GA AI+E++EAEIPLIVCITEG+P DMV+VK+ L + Sbjct: 86 VAEAKKATDPHATVIYVPPPGAAAAIMEALEAEIPLIVCITEGVPQHDMVKVKSALVSQD 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPDTKGIILIGEIGGVAEEKAADYLTEFNTGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 266 SFIAGISAPPGRRMGHAGAIISGGKGGANDKIEALEKAGVIVTRSPAKMGYELFKEMKRL 325 >gi|84997165|ref|XP_953304.1| Succinyl-CoA ligase [GDP-forming] alpha-chain, mitochondrial precursor [Theileria annulata] gi|65304300|emb|CAI76679.1| Succinyl-CoA ligase [GDP-forming] alpha-chain, mitochondrial precursor [Theileria annulata] Length = 329 Score = 328 bits (840), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 160/299 (53%), Positives = 218/299 (72%), Gaps = 7/299 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--GNVNVPVFT 60 + +DK+TK++ QGLTGK TFHT + + Y T+ VGG++PKKG T W ++P+FT Sbjct: 31 VYIDKDTKIICQGLTGKQATFHTTECLKYYGTKFVGGVNPKKGGTSWKSLDDKHSLPIFT 90 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V+EAK+ T A+ASVIYVPP GA DAI+E+IEAE+PL++CITEGIP DMV+VK L+ Sbjct: 91 SVSEAKKETGADASVIYVPPPGAADAIVEAIEAELPLVICITEGIPQHDMVKVKTLLKDP 150 Query: 121 SSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPGI+ P+ CKIGIMPG I +KG VGI+SRSGTLTYEAV QT++ GLGQS Sbjct: 151 YCKTTLIGPNCPGIIKPEECKIGIMPGHIHKKGVVGIISRSGTLTYEAVTQTTEIGLGQS 210 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GIGGDP G F D + F+ + T+ ++++GEIGG+AEE+ A ++K KP Sbjct: 211 VCIGIGGDPFGGISFTDAFKKFVKNPETKGVLIIGEIGGTAEEDVADWIKANP---TDKP 267 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +V +AG +APPG+ MGHAGA+ISG KG A KI A++++G+ + SPA +G ++ L Sbjct: 268 VVAIIAGISAPPGKRMGHAGAIISGNKGTAHGKIQALRDSGVIVPNSPAEMGLAMFNAL 326 >gi|88860192|ref|ZP_01134831.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding protein [Pseudoalteromonas tunicata D2] gi|88818186|gb|EAR28002.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding protein [Pseudoalteromonas tunicata D2] Length = 290 Score = 327 bits (839), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 175/298 (58%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A ASVIYVP DAI+E+I+A I LIVCITEGIP LDMV VK +LE++ Sbjct: 56 TVRDAVDATGATASVIYVPAPFCKDAILEAIDAGIELIVCITEGIPTLDMVDVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP KIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGETKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVL+LF D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLKLFQEDPQTEAIVMIGEIGGTAEEEAAEYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A +K A++ AG+ S A IG++L E G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAVEKFAALEAAGVKTVRSLADIGKALKEKTG 289 >gi|281181130|dbj|BAI57460.1| succinyl-CoA synthetase alpha subunit [Escherichia coli SE15] Length = 290 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 166/298 (55%), Positives = 220/298 (73%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+VLVQG+TGK GTFHTEQAI Y TQ+VGG+ P KG +++ PVF Sbjct: 1 MSVLINKHTRVLVQGITGKNGTFHTEQAIAY-GTQIVGGVTPGKGGQR----HLDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 ++ +A +T A+ASVIYVP D+++E+IEA + L+V ITEG+P LDMV+V+ L+ Sbjct: 56 SMKDAMRQTEADASVIYVPAPFVLDSVVEAIEAGVKLVVVITEGVPTLDMVKVRRLLDCH 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++TP CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PDVRLIGPNCPGVITPGECKIGIMPGEIHRPGRIGIVSRSGTLTYEAVAQTTALGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FID L LF D T++++M+GEIGG+AEE AA+F++ + KP+ Sbjct: 176 CIGIGGDPVPGTNFIDALRLFENDPQTDAVIMIGEIGGNAEERAAEFIRHDM----NKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VG++AG TAP G+ MGHAGA+ISGG G AEDK A +AG+ +PA +G +L ++ Sbjct: 232 VGYIAGVTAPKGKRMGHAGAIISGGSGSAEDKFRAFDKAGMAWTRNPALLGETLWNVI 289 >gi|170068274|ref|XP_001868803.1| succinyl-CoA ligase subunit alpha [Culex quinquefasciatus] gi|167864342|gb|EDS27725.1| succinyl-CoA ligase subunit alpha [Culex quinquefasciatus] Length = 304 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 171/301 (56%), Positives = 229/301 (76%), Gaps = 6/301 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M L + V+ QG TGK GTFH++QAI Y T++VGG+ P KG ++++PVF Sbjct: 6 MVRLFSRVKLVICQGFTGKQGTFHSQQAIEY-GTKLVGGVSPGKGGKT----HLDLPVFN 60 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEK 119 +V EAK+ TAA+A+VIYVPP GA AI+E+IEAE+PLIVCITEG+P DMV+VK A L + Sbjct: 61 SVKEAKQATAADATVIYVPPPGAAKAILEAIEAEMPLIVCITEGVPQHDMVKVKHALLAQ 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ LGQ+ Sbjct: 121 EKSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVNLGQTL 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+ Sbjct: 181 CVGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLMQYNQGIKAKPV 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V F+AG +APPGR MGHAGA+ISGGKGGA+DKINA++++G+ + SPA++G+ L + + Sbjct: 241 VSFIAGLSAPPGRRMGHAGAIISGGKGGAQDKINALEKSGVIVTRSPAQMGKELYKEMKR 300 Query: 300 L 300 L Sbjct: 301 L 301 >gi|328773265|gb|EGF83302.1| hypothetical protein BATDEDRAFT_36456 [Batrachochytrium dendrobatidis JAM81] Length = 342 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 176/302 (58%), Positives = 223/302 (73%), Gaps = 7/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 +++++DKNTKV+ QG TGK GT H++ AI Y T++VGG P K T G +PVF Sbjct: 42 LNMMIDKNTKVICQGFTGKMGTLHSKAAIEY-GTRMVGGTSPSKAGTTHLG----LPVFG 96 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA-RLEK 119 +V EA +ASVIYVPP GA AIIE+I+AEIPL+VCITEGIP DMV+VK L + Sbjct: 97 SVKEAVSEVKPDASVIYVPPPGAAAAIIEAIQAEIPLVVCITEGIPQQDMVKVKKILLNQ 156 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + SRLIGPNCPGI+ PD CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 157 NKSRLIGPNCPGIIKPDQCKIGIMPGHIHRPGKIGIVSRSGTLTYEAVAQTTAAGLGQTL 216 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL-KDEAKRGRKKP 238 VGIGGDP GT F+D L++FLAD TE IV++GEIGGSAEE+AA++L + R KP Sbjct: 217 CVGIGGDPFNGTNFVDCLKVFLADPETEGIVLIGEIGGSAEEDAAEYLMQHNMSRSNPKP 276 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V F+AG +APPGR MGHAGA+ISGGKG AEDK+ A++ AG+ ++ SPA++G + + Sbjct: 277 VVSFIAGLSAPPGRRMGHAGAIISGGKGKAEDKVAALQRAGVIVSQSPAKLGYYMKKAFD 336 Query: 299 SL 300 L Sbjct: 337 DL 338 >gi|225075112|ref|ZP_03718311.1| hypothetical protein NEIFLAOT_00111 [Neisseria flavescens NRL30031/H210] gi|224953596|gb|EEG34805.1| hypothetical protein NEIFLAOT_00111 [Neisseria flavescens NRL30031/H210] Length = 296 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 165/299 (55%), Positives = 225/299 (75%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG ++N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAYG-TKVVGGVTPGKGGQT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE + Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVL 290 >gi|255065288|ref|ZP_05317143.1| succinyl-CoA synthetase subunit alpha [Neisseria sicca ATCC 29256] gi|255050709|gb|EET46173.1| succinyl-CoA synthetase subunit alpha [Neisseria sicca ATCC 29256] Length = 296 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 165/299 (55%), Positives = 225/299 (75%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG ++N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAYG-TKVVGGVTPGKGGQT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE + Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGSTMLEVL 290 >gi|255648287|gb|ACU24596.1| unknown [Glycine max] Length = 324 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 184/297 (61%), Positives = 229/297 (77%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK+T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF T Sbjct: 29 AVFVDKSTRVICQGITGKNGTFHTEQAIEY-GTNMVGGVTPKKGGTEHLG----LPVFNT 83 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 VAEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMVRVKA L + S Sbjct: 84 VAEAKAETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQS 143 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 144 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTC 203 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D L+ FL D TE I+++GEIGG+AEE+AA +KD G +KP+V Sbjct: 204 VGIGGDPFNGTNFVDCLQKFLTDPQTEGIILIGEIGGTAEEDAAALIKDS---GTEKPVV 260 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DKI ++EAG+ + SPA+IG +++++ Sbjct: 261 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVMVVESPAKIGAAMLDVF 317 >gi|6980727|pdb|1CQI|A Chain A, Crystal Structure Of The Complex Of Adp And Mg2+ With Dephosphorylated E. Coli Succinyl-Coa Synthetase gi|6980729|pdb|1CQI|D Chain D, Crystal Structure Of The Complex Of Adp And Mg2+ With Dephosphorylated E. Coli Succinyl-Coa Synthetase gi|6980731|pdb|1CQJ|A Chain A, Crystal Structure Of Dephosphorylated E. Coli Succinyl-Coa Synthetase gi|6980733|pdb|1CQJ|D Chain D, Crystal Structure Of Dephosphorylated E. Coli Succinyl-Coa Synthetase Length = 286 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 171/292 (58%), Positives = 215/292 (73%), Gaps = 9/292 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 SIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF T Sbjct: 1 SILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFNT 55 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 VREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST V Sbjct: 116 VRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+VG Sbjct: 176 GIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L Sbjct: 232 YIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEAL 283 >gi|322420764|ref|YP_004199987.1| succinyl-CoA synthetase subunit alpha [Geobacter sp. M18] gi|320127151|gb|ADW14711.1| succinyl-CoA synthetase, alpha subunit [Geobacter sp. M18] Length = 290 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 167/297 (56%), Positives = 218/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI+++K+T+V+ QG+TG G FH + A Y T++VGG+ P KG T G PVF Sbjct: 1 MSIMINKDTRVITQGITGATGLFHAQGAREY-GTRMVGGVTPGKGGTVVEG----FPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A ASVIYVPP A D+I+E+++A I L+ CITEGIPVLDMV+VK L Sbjct: 56 TVADAVQATGATASVIYVPPPFAADSIMEAVDAGIELVCCITEGIPVLDMVKVKQYLIGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I + G VG++SRSGTLTYEAV+Q + GLGQST Sbjct: 116 KTRLIGPNCPGVITPGQCKIGIMPGYIHKPGKVGVVSRSGTLTYEAVWQLTSIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L LF D TE+++M+GEIGGSAEEEAA+F+K KP+ Sbjct: 176 VGIGGDPVNGTSHIDCLRLFEQDPDTEAVIMIGEIGGSAEEEAARFVKAH----MTKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAPPG+ MGHAGA+ISGGKG A +K+ ++E GI +A +PA + ++L+++ Sbjct: 232 AYIAGVTAPPGKRMGHAGAIISGGKGTATEKVAVLRECGISVAATPAEMAQALLKVY 288 >gi|255546902|ref|XP_002514509.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial precursor, putative [Ricinus communis] gi|223546408|gb|EEF47909.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial precursor, putative [Ricinus communis] Length = 334 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 186/296 (62%), Positives = 228/296 (77%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT ++ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF TV Sbjct: 40 VFVDKNTGLICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNTV 94 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 AEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMVRVKA L + S Sbjct: 95 AEAKAETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSK 154 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 155 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCV 214 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D +E FLAD TE I+++GEIGG+AEE+AA +K+ G KPIV Sbjct: 215 GIGGDPFNGTNFVDCIEKFLADPQTEGIILIGEIGGTAEEDAAALIKES---GTDKPIVA 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A+DKI +KEAG+ + SPA+IG +++++ Sbjct: 272 FIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLKEAGVTVVESPAKIGVAMLDVF 327 >gi|226945041|ref|YP_002800114.1| Succinyl-CoA ligase subunit alpha [Azotobacter vinelandii DJ] gi|226719968|gb|ACO79139.1| Succinyl-CoA ligase, alpha subunit [Azotobacter vinelandii DJ] Length = 295 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 172/298 (57%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG ++++PVF Sbjct: 1 MSILVNKDTKVICQGFTGSQGTFHSEQAIAY-GTRMVGGVTPGKGGLV----HLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A+ASVIYVP D+I+E+ A + LIVCITEG+P LDM++VK + ++ Sbjct: 56 TVREAVEATGADASVIYVPAPFCKDSILEAAFAGVRLIVCITEGVPTLDMLQVKLKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGI PG+I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIQPGNIHMPGRVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L LF D TE+IVM+GEIGGSAEEEAA ++K + KP+V Sbjct: 176 VGIGGDPIPGSSFIDILGLFQDDPQTEAIVMIGEIGGSAEEEAAAYIKAKV----DKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPSGKRMGHAGAIISGGKGTADEKFAALQDAGVQTVRSLADIGKALAELTG 289 >gi|327480490|gb|AEA83800.1| succinyl-CoA synthetase subunit alpha [Pseudomonas stutzeri DSM 4166] Length = 294 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 173/298 (58%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTMHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A+ASVIYVP D+I+E+ I LIVCITEGIP LDM+ VK + ++ Sbjct: 56 TVREAVEATGADASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLEVKIKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGI PG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIQPGHIHMPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSTFIDILKLFQDDPQTEAIVMIGEIGGSAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAEVTG 289 >gi|241668897|ref|ZP_04756475.1| succinyl-CoA synthetase, alpha subunit [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877429|ref|ZP_05250139.1| succinyl-CoA synthetase subunit alpha [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843450|gb|EET21864.1| succinyl-CoA synthetase subunit alpha [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 290 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 169/298 (56%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKVLVQG TGK GTFH+EQAI Y T +VGG+ P KG T ++N PVF Sbjct: 1 MSVLVDKNTKVLVQGFTGKNGTFHSEQAIAYG-TNIVGGVTPGKGGTT----HLNRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA T A+ASVIYVP D+ IE+I++ + L+V ITEG+P LDM+ VK L+ Sbjct: 56 TMAEAVAATGADASVIYVPAPFVKDSAIEAIDSGVKLVVIITEGVPTLDMLVVKEYLKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +++GPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT++ G GQST Sbjct: 116 DVQVVGPNCPGVITPGQCKIGIMPGHIHQPGKVGIISRSGTLTYEAVAQTTKLGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G I+ L+L D TE+I+++GEIGG+AEEEAA+++K KP++ Sbjct: 176 IGIGGDPIPGMNQIEALKLLENDPQTEAIILIGEIGGTAEEEAAEYIKHNV----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAPPG+ MGHAGA+ISGGKG AE+K A + AGI SPA +G L E+ G Sbjct: 232 GYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAAFEAAGIAYTRSPAELGSKLKEVTG 289 >gi|330967006|gb|EGH67266.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. actinidiae str. M302091] Length = 293 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 170/298 (57%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T ++N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVDTTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVIVIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|294931297|ref|XP_002779820.1| Succinyl-CoA ligase, putative [Perkinsus marinus ATCC 50983] gi|239889506|gb|EER11615.1| Succinyl-CoA ligase, putative [Perkinsus marinus ATCC 50983] Length = 333 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 185/298 (62%), Positives = 231/298 (77%), Gaps = 7/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFTT 61 + VDKNTKV+ QGLTGK GTFHT QAI Y T++VGG++PKK G+T+ GG ++P+F Sbjct: 31 VWVDKNTKVICQGLTGKQGTFHTAQAIEY-GTKMVGGVNPKKAGTTHHVGGK-DLPIFAN 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS- 120 V EA+E T A+ASVIYVPPSGA A +E+IEAEIPL+VCITEGIP DMV+VKA L+ + Sbjct: 89 VMEAREATGADASVIYVPPSGAASACLEAIEAEIPLVVCITEGIPQHDMVKVKAALKMAG 148 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RLIGPNCPGI+ P+ CKIGIMPG I +KG +G++SRSGTLTYEAV QT++ GLGQST Sbjct: 149 GRTRLIGPNCPGIIKPEECKIGIMPGYIHKKGKIGVVSRSGTLTYEAVNQTTEVGLGQST 208 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT FID LE F+ D TE I+++GEIGG+AEEEAA++LK+ K KP+ Sbjct: 209 VVGIGGDPFNGTNFIDCLERFVQDPQTEGIILIGEIGGAAEEEAAEWLKENNK--NNKPV 266 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V F+AG TAPPGR MGHAGA+ISGGKG A KI A++ G + SPA +G ++E+ Sbjct: 267 VSFIAGVTAPPGRRMGHAGAIISGGKGTAATKIAALEGCGASVVRSPADLGVRMLEMY 324 >gi|195400823|ref|XP_002059015.1| GJ15342 [Drosophila virilis] gi|194141667|gb|EDW58084.1| GJ15342 [Drosophila virilis] Length = 344 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 164/293 (55%), Positives = 216/293 (73%), Gaps = 6/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V+K+TKV+VQG TGK TFH+E++ Y TQ+VGG+ PKKG T ++ PVF Sbjct: 36 NLKVNKDTKVMVQGFTGKQATFHSEESKKY-GTQIVGGVSPKKGGTT----HLEKPVFKD 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + +A+VI++PP+ A + I +IE EI LIV ITEG+P +DMVR+ L + Sbjct: 91 VKEAVKELKPDATVIFIPPATAAEGICAAIENEIGLIVAITEGVPQVDMVRILEMLNCQE 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 151 KSRLLGPNCPGIIAPEQCKIGIMPGHIHKRGVVGIVSRSGTLTYEAVHQTTNVGLGQTLC 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDP GT FID L++FL D+ T++IV++GEIGG+AEE+AA++LK KP+V Sbjct: 211 IGVGGDPFNGTNFIDALKIFLPDKETKAIVLIGEIGGTAEEDAAEYLKKHNSGCESKPVV 270 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG TAPPGR MGHAGA+ISGGKG A DK+ A+KEAG+ IA +P IG L Sbjct: 271 AFIAGMTAPPGRRMGHAGAIISGGKGAATDKLKALKEAGVIIALNPCHIGTLL 323 >gi|332977242|gb|EGK14037.1| succinyl-CoA synthetase subunit alpha [Psychrobacter sp. 1501(2011)] Length = 291 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 169/299 (56%), Positives = 221/299 (73%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DK+TKVLVQG TGK GTFH+EQAI Y T+VVGG+ P KG G +PVF Sbjct: 1 MSVLIDKDTKVLVQGFTGKNGTFHSEQAIEY-GTKVVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA E T A+ASVIYVP D+IIE+++A + LIV ITEG+P LDM++ K +E++ Sbjct: 56 TMAEAMEATNADASVIYVPAPFVLDSIIEAVDAGVKLIVVITEGVPTLDMLKAKRYIEEA 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +++GPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT++ G GQST Sbjct: 116 GDVKMVGPNCPGVITPGQCKIGIMPGHIHLPGKVGIISRSGTLTYEAVAQTTKLGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G ID L++F D TE+IV++GEIGG+AEEEAA ++K+ KP+ Sbjct: 176 CIGIGGDPIPGMNQIDCLKMFQEDPQTEAIVLIGEIGGTAEEEAAAYIKEHV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +G++AG TAP G+ MGHAGA+ISGGKG AE+K A +EAGI P++IG ++ E+ G Sbjct: 232 IGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFKAFEEAGIAYTRDPSKIGETVKEVTG 290 >gi|329295939|ref|ZP_08253275.1| Succinyl-CoA synthetase, alpha subunit [Plautia stali symbiont] Length = 291 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 171/297 (57%), Positives = 218/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI++DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSIMIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDGILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP C IGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECMIGIMPGHIHQPGRVGIVSRSGTLTYEAVKQTTDIGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQDDPQTEAIVMIGEIGGSAEEEAAAFIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVL 288 >gi|227886928|ref|ZP_04004733.1| succinyl-CoA synthetase alpha chain [Escherichia coli 83972] gi|227836069|gb|EEJ46535.1| succinyl-CoA synthetase alpha chain [Escherichia coli 83972] gi|307556210|gb|ADN48985.1| succinyl-CoA synthase, alpha subunit [Escherichia coli ABU 83972] Length = 290 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 167/298 (56%), Positives = 219/298 (73%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+VLV G+TGK GTFHTEQAI Y TQ+VGG+ P KG +++ PVF Sbjct: 1 MSVLINKHTRVLVLGITGKNGTFHTEQAIAY-GTQIVGGVTPGKGGQR----HLDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 ++ EA +T A+ASVIYVP D+++E+IEA + L+V ITEG+P LDMV+V+ L+ Sbjct: 56 SMKEAMRQTEADASVIYVPAPFVLDSVVEAIEAGVKLVVVITEGVPTLDMVKVRRLLDCH 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++TP CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PDVRLIGPNCPGVITPGECKIGIMPGEIHRPGRIGIVSRSGTLTYEAVAQTTALGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FID L LF D T++++M+GEIGG+AEE AA+F++ E KP+ Sbjct: 176 CIGIGGDPVPGTNFIDALRLFENDPQTDAVIMIGEIGGNAEERAAEFIRHEM----NKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VG++AG TAP G+ MGHAGA+ISGG G AEDK A +AG+ +PA +G +L ++ Sbjct: 232 VGYIAGVTAPKGKRMGHAGAIISGGSGSAEDKFRAFDKAGMAWTRNPALLGETLWNVI 289 >gi|218551371|ref|YP_002385163.1| succinyl-CoA synthetase subunit alpha [Escherichia fergusonii ATCC 35469] gi|218358913|emb|CAQ91574.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Escherichia fergusonii ATCC 35469] Length = 290 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 168/298 (56%), Positives = 219/298 (73%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+VLVQG+TGK GTFHTEQAI Y TQ+VGG+ P KG +++ PVF Sbjct: 1 MSVLINKHTRVLVQGITGKNGTFHTEQAIAY-GTQIVGGVTPGKGGQL----HLDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 ++ EA +T A+ASVIYVP D+++E+IE+ + LIV ITEG+P LDMV+V+ L+ Sbjct: 56 SMKEAMRQTEADASVIYVPAPFVLDSVVEAIESGVKLIVVITEGVPTLDMVKVRRLLDCH 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPGI+TP CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PDVRLIGPNCPGIITPGECKIGIMPGEIHRPGRIGIVSRSGTLTYEAVAQTTALGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FID L LF D T++++M+GEIGG+AEE AA+F++ E K + Sbjct: 176 CIGIGGDPVPGTNFIDALRLFENDPQTDAVIMIGEIGGNAEERAAEFIRHEM----NKTV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VG++AG TAP G+ MGHAGA+ISGG G AEDK A +AG+ +PA +G +L ++ Sbjct: 232 VGYIAGVTAPKGKRMGHAGAIISGGSGSAEDKFRAFDKAGMAWTRNPALLGETLWNVI 289 >gi|32469355|gb|AAP83350.1| succinyl-CoA synthetase, alpha subunit [Neocallimastix patriciarum] Length = 339 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 168/294 (57%), Positives = 222/294 (75%), Gaps = 7/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L++KNTKV+ QG TGK GTFH + A+ Y T++VGG+ PKK T G +PV+ + Sbjct: 41 NLLINKNTKVITQGFTGKQGTFHAKNALAYG-TKMVGGVSPKKAGTTHLG----LPVYKS 95 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A ASVIYVPP GA AI+E+IEAE+PL+VCITEGIP DMV+V L +S Sbjct: 96 VQDACNALHPEASVIYVPPPGAASAILEAIEAEVPLVVCITEGIPQQDMVKVVDALNSQS 155 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ + CKIGIMPG I KG +GI+SRSGTLTYEAV QT++ GLGQ+ Sbjct: 156 KTRLVGPNCPGVIKAEECKIGIMPGHIHTKGRIGIVSRSGTLTYEAVNQTTKAGLGQTLV 215 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKPI 239 GIGGDP GT FID L++FL DE+T+ I+++GEIGGSAEEEA++FLK R KP+ Sbjct: 216 YGIGGDPFNGTNFIDALKIFLNDESTDGIILIGEIGGSAEEEASEFLKQYNLTRKVPKPV 275 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 V F+AG+TAPPGR MGHAGA+++GGKGGA+DK+ A++ AG+ ++ SPA++G L Sbjct: 276 VSFIAGRTAPPGRRMGHAGAIVAGGKGGADDKVKALRSAGVVVSASPAQMGEKL 329 >gi|261364253|ref|ZP_05977136.1| succinyl-CoA synthetase subunit alpha [Neisseria mucosa ATCC 25996] gi|288567495|gb|EFC89055.1| succinyl-CoA synthetase subunit alpha [Neisseria mucosa ATCC 25996] Length = 296 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 165/299 (55%), Positives = 224/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG ++N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE + Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGSTMLEVL 290 >gi|292669155|ref|ZP_06602581.1| succinyl-CoA synthetase subunit alpha [Selenomonas noxia ATCC 43541] gi|292649207|gb|EFF67179.1| succinyl-CoA synthetase subunit alpha [Selenomonas noxia ATCC 43541] Length = 301 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 165/297 (55%), Positives = 216/297 (72%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DK+TKV+VQG+TG A FHTEQ + Y TQ+V G+ P K G VPVF Sbjct: 1 MSVLIDKDTKVIVQGITGTAAMFHTEQMLKY-GTQIVAGVTPGKAGQTALG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A SVIYVP A DAI+E+I+AE+ L+VCITE IPVLDMV+V+ + Sbjct: 56 TVKDAVDATGATVSVIYVPARFAADAILEAIDAELDLVVCITENIPVLDMVKVRRYMRGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R +GPNCPG+LT K+GI PGS+ + G VG++SRSGTLTYEA FQ + G+GQ+T Sbjct: 116 KTRFLGPNCPGLLTSGQSKVGITPGSVSKPGHVGLVSRSGTLTYEAAFQLTNAGIGQTTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKG +FIDVL+LF D T +++M+GEIGG+AEEEAA ++K+ KP+ Sbjct: 176 VGIGGDPVKGLDFIDVLQLFRDDPDTYAVLMIGEIGGTAEEEAAAWIKENMP---DKPVG 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+ APPG+ MGHAGA+ISGGKG A DK+ A+ AGI +A + A IG ++V+LL Sbjct: 233 AFIAGRQAPPGKRMGHAGAIISGGKGTAADKVAALNAAGIPVAETVAHIGETMVKLL 289 >gi|291001767|ref|XP_002683450.1| succinyl-CoA synthetase alpha subunit [Naegleria gruberi] gi|284097079|gb|EFC50706.1| succinyl-CoA synthetase alpha subunit [Naegleria gruberi] Length = 331 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 176/299 (58%), Positives = 232/299 (77%), Gaps = 10/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L++KNT+V+ QG+TGK GTFHT+QAI Y T++VGG+HP+KG T N+++P+F + Sbjct: 34 TLLLNKNTRVICQGVTGKQGTFHTKQAIEYG-TKMVGGVHPQKGGQ--THPNMDLPIFAS 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA+E+ A+ASVIYVPPSGA AI+ESIEAE+PLIVCITE + + + V + E + Sbjct: 91 VKEAREKVGASASVIYVPPSGAAQAILESIEAEMPLIVCITEDLELFRKL-VPSAPEYGN 149 Query: 122 S---RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + RL+GPNCPG++ P+ KIGIMPG I RKG +GI+SRSGTLTYEAV QT+ LGQS Sbjct: 150 NLHIRLVGPNCPGVIKPEESKIGIMPGYIHRKGKIGIVSRSGTLTYEAVSQTTAVNLGQS 209 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP GT FI VL+LFL D TE I+M+GEIGG AEE+AA+FLK+ KKP Sbjct: 210 TCIGIGGDPFNGTNFIQVLDLFLNDPETEGIIMIGEIGGQAEEDAAEFLKNHP---IKKP 266 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG TAPPGR MGHAGAVISGGKG A KI A+++AG+ ++ SPAR+G ++ +++ Sbjct: 267 VVGFIAGVTAPPGRRMGHAGAVISGGKGDAPSKIKALEDAGVVVSRSPARLGETMKQVM 325 >gi|308389602|gb|ADO31922.1| putative succinyl-CoA synthetase alpha subunit [Neisseria meningitidis alpha710] gi|325130102|gb|EGC52885.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis OX99.30304] gi|325136105|gb|EGC58714.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis M0579] gi|325202253|gb|ADY97707.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis M01-240149] gi|325207994|gb|ADZ03446.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis NZ-05/33] Length = 296 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 165/299 (55%), Positives = 224/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG ++N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE + Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----SKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVL 290 >gi|67523679|ref|XP_659899.1| hypothetical protein AN2295.2 [Aspergillus nidulans FGSC A4] gi|40745250|gb|EAA64406.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4] gi|259487689|tpe|CBF86553.1| TPA: succinyl-CoA synthetase alpha subunit, putative (AFU_orthologue; AFUA_5G06130) [Aspergillus nidulans FGSC A4] Length = 329 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 177/295 (60%), Positives = 224/295 (75%), Gaps = 10/295 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFT 60 ++ ++ +TKVL QG TGK GTFH EQAI Y T+VVGG +PKK GST+ +++PVF Sbjct: 34 NLRINADTKVLFQGFTGKQGTFHAEQAIAYG-TKVVGGTNPKKAGSTH-----LDLPVFA 87 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 V+EA + T A AS I+VPP A I E+IEAE+PL+VCITEGIP DMVR+ L+ + Sbjct: 88 NVSEAVKETGATASAIFVPPPLAAKGIEEAIEAEVPLVVCITEGIPQHDMVRITDILKTQ 147 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +RL+GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 148 NKTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSL 207 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA+F K A KP Sbjct: 208 VVGIGGDPFSGTNFIDCLRIFLEDEETDGIIMIGEIGGSAEEDAAEFFK--ANNKHNKPA 265 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 VGF+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G+SL+ Sbjct: 266 VGFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALESAGVVVERSPASLGKSLL 320 >gi|15676853|ref|NP_273998.1| succinyl-CoA synthetase subunit alpha [Neisseria meningitidis MC58] gi|261401147|ref|ZP_05987272.1| succinyl-CoA synthetase subunit alpha [Neisseria lactamica ATCC 23970] gi|313668598|ref|YP_004048882.1| succinyl-CoA synthetase alpha subunit [Neisseria lactamica ST-640] gi|7226200|gb|AAF41366.1| succinyl-CoA synthetase, alpha subunit [Neisseria meningitidis MC58] gi|269208925|gb|EEZ75380.1| succinyl-CoA synthetase subunit alpha [Neisseria lactamica ATCC 23970] gi|313006060|emb|CBN87521.1| putative succinyl-CoA synthetase alpha subunit [Neisseria lactamica 020-06] gi|316985362|gb|EFV64311.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Neisseria meningitidis H44/76] gi|325134124|gb|EGC56776.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis M13399] gi|325140151|gb|EGC62678.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis CU385] gi|325144249|gb|EGC66554.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis M01-240013] gi|325200356|gb|ADY95811.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis H44/76] gi|325206210|gb|ADZ01663.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis M04-240196] Length = 296 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 165/299 (55%), Positives = 224/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG ++N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE + Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----SKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVL 290 >gi|319637661|ref|ZP_07992427.1| succinyl-CoA ligase subunit alpha [Neisseria mucosa C102] gi|317400816|gb|EFV81471.1| succinyl-CoA ligase subunit alpha [Neisseria mucosa C102] Length = 296 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 165/299 (55%), Positives = 224/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG ++N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE + Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGSTMLEVL 290 >gi|317047348|ref|YP_004114996.1| succinyl-CoA synthetase subunit alpha [Pantoea sp. At-9b] gi|316948965|gb|ADU68440.1| succinyl-CoA synthetase, alpha subunit [Pantoea sp. At-9b] Length = 291 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 217/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDGILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGRVGIVSRSGTLTYEAVKQTTDIGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPQTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVL 288 >gi|302879758|ref|YP_003848322.1| succinyl-CoA synthetase, alpha subunit [Gallionella capsiferriformans ES-2] gi|302582547|gb|ADL56558.1| succinyl-CoA synthetase, alpha subunit [Gallionella capsiferriformans ES-2] Length = 294 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 164/300 (54%), Positives = 219/300 (73%), Gaps = 10/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL+DKNT+V+ QG+TGK G FHT + Y V G+ P KG + G VP+ Sbjct: 1 MSILIDKNTRVMTQGMTGKVGQFHTLGCLGYANGANCFVAGVTPNKGGQNFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK++T A SVIYVPP+ A AI E++EA++ L++CITEGIPV DM+R + +++ Sbjct: 57 YNSVLEAKQQTGATVSVIYVPPAYAAAAIDEAVEADLDLVICITEGIPVHDMIRTRDKMK 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q S GLGQS Sbjct: 117 GKRTLLIGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLSALGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + VGIGGDP+ G + +D+L LF D TE+++MVGEIGGS EE A+++KD KKP Sbjct: 177 SCVGIGGDPINGMKHLDILRLFNEDPETEAVIMVGEIGGSDEEACARWIKDNM----KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VGF+AG TAPPG+ MGHAGA+ISGG+GGA+ K+ M+E GI I +PA +GR + ++LG Sbjct: 233 VVGFIAGITAPPGKRMGHAGAIISGGQGGADTKLAVMEECGIHITRNPADMGRVMQKILG 292 >gi|161869872|ref|YP_001599041.1| succinyl-CoA synthetase subunit alpha [Neisseria meningitidis 053442] gi|254804842|ref|YP_003083063.1| succinyl-CoA synthetase alpha chain [Neisseria meningitidis alpha14] gi|261379708|ref|ZP_05984281.1| succinyl-CoA synthetase subunit alpha [Neisseria subflava NJ9703] gi|296314777|ref|ZP_06864718.1| succinyl-CoA synthetase subunit alpha [Neisseria polysaccharea ATCC 43768] gi|161595425|gb|ABX73085.1| succinyl-CoA synthetase alpha subunit [Neisseria meningitidis 053442] gi|254668384|emb|CBA05494.1| succinyl-CoA synthetase alpha chain [Neisseria meningitidis alpha14] gi|254669448|emb|CBA03310.1| succinyl-CoA synthetase alpha chain [Neisseria meningitidis alpha153] gi|254672883|emb|CBA07162.1| succinyl-CoA synthetase alpha chain [Neisseria meningitidis alpha275] gi|284797375|gb|EFC52722.1| succinyl-CoA synthetase subunit alpha [Neisseria subflava NJ9703] gi|296838420|gb|EFH22358.1| succinyl-CoA synthetase subunit alpha [Neisseria polysaccharea ATCC 43768] gi|309380078|emb|CBX21489.1| unnamed protein product [Neisseria lactamica Y92-1009] gi|319410292|emb|CBY90634.1| succinyl-CoA synthetase alpha chain (SCS-alpha) [Neisseria meningitidis WUE 2594] gi|325132158|gb|EGC54854.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis M6190] gi|325138090|gb|EGC60663.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis ES14902] gi|325204031|gb|ADY99484.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis M01-240355] Length = 296 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 165/299 (55%), Positives = 224/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG ++N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE + Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVL 290 >gi|238920746|ref|YP_002934261.1| succinyl-CoA synthetase, alpha subunit [Edwardsiella ictaluri 93-146] gi|238870315|gb|ACR70026.1| succinyl-CoA synthetase, alpha subunit [Edwardsiella ictaluri 93-146] Length = 290 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 169/298 (56%), Positives = 220/298 (73%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ T+V+ QG TG GTFH+EQA+ Y T++VGG+ P KG + G +PVF Sbjct: 1 MSILINHETRVICQGFTGSQGTFHSEQALAY-GTRLVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T ANASVIYVP D+I+E+I+ I LI+CITEGIP LDM+ ++A+L++S Sbjct: 56 TVREAVSATGANASVIYVPAPFCKDSILEAIDGGISLIICITEGIPTLDMLVIRAKLDQS 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPNCPG++TP +CKIGIMPG I R G +GI+SRSGTLTYEAV QTS GLGQST Sbjct: 116 PGVRMIGPNCPGVITPGACKIGIMPGHIHRPGRIGIVSRSGTLTYEAVKQTSDVGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ G FID+L LF AD TE+IVM+GEIGG+AEEEAA ++K KP+ Sbjct: 176 CVGIGGDPIPGASFIDILALFQADPQTEAIVMIGEIGGNAEEEAAAYIKAYV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG++ ++ L Sbjct: 232 IGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVVTVRSLADIGQAALQAL 289 >gi|92113347|ref|YP_573275.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Chromohalobacter salexigens DSM 3043] gi|91796437|gb|ABE58576.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Chromohalobacter salexigens DSM 3043] Length = 290 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 172/293 (58%), Positives = 213/293 (72%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILIDKSTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+ A I LIVCITEGIP LDM+ VK + ++ Sbjct: 56 TVKEAVETTGAEASVIYVPAPFCKDSILEAANAGIKLIVCITEGIPTLDMLDVKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP KIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGETKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDHGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSTFIDMLEMFEKDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG TAPPG+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L Sbjct: 232 SYIAGVTAPPGKRMGHAGAIIAGGKGTADEKFAALESAGVKTVRSLAEIGDAL 284 >gi|330844712|ref|XP_003294260.1| succinyl coenzyme A synthetase alpha subunit [Dictyostelium purpureum] gi|325075310|gb|EGC29214.1| succinyl coenzyme A synthetase alpha subunit [Dictyostelium purpureum] Length = 312 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 181/299 (60%), Positives = 228/299 (76%), Gaps = 9/299 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 +L+DKNTKV+ QG TG GTFH++QAI Y TQ+VGG+ P KG ++ +PVF TV Sbjct: 19 VLIDKNTKVICQGFTGNQGTFHSKQAIEY-GTQMVGGVSPGKGGQK----HLELPVFNTV 73 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAK++T ANA+VIYVPP A AI E+I+A++ LIVCITEGIP DMV+VK L EK + Sbjct: 74 QEAKQQTGANATVIYVPPPFAAAAIKEAIDADMELIVCITEGIPQQDMVKVKKYLNEKPT 133 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQST + Sbjct: 134 TRLIGPNCPGIIKPGECKIGIMPGHIHKKGKIGIVSRSGTLTYEAVAQTTAVGLGQSTCI 193 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D L++F D TE I+++GEIGG AEEEAAQ+L D KP+V Sbjct: 194 GIGGDPFNGTNFVDCLKMFTKDPQTEGIILIGEIGGEAEEEAAQWLIDNP---TDKPVVS 250 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKG A KINA+K AG+ I+PSPA++G +++E + +L Sbjct: 251 FIAGTSAPPGRRMGHAGAIISGGKGDANSKINALKAAGVTISPSPAKLGEAMLERMKAL 309 >gi|261392693|emb|CAX50266.1| succinyl-CoA synthetase alpha chain (SCS-alpha) [Neisseria meningitidis 8013] gi|325128082|gb|EGC50977.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis N1568] gi|325142235|gb|EGC64652.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis 961-5945] gi|325198192|gb|ADY93648.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis G2136] Length = 296 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 165/299 (55%), Positives = 224/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG ++N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE + Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVL 290 >gi|30088685|gb|AAP13544.1| succinyl-CoA synthetase alpha subunit [Neocallimastix frontalis] Length = 330 Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 168/294 (57%), Positives = 222/294 (75%), Gaps = 7/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L++KNTKV+ QG TGK GTFH + A+ Y T++VGG+ PKK T G +PV+ + Sbjct: 32 NLLINKNTKVITQGFTGKQGTFHAKNALAYG-TKMVGGVSPKKAGTTHLG----LPVYKS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A ASVIYVPP GA AI+E+IEAE+PL+VCITEGIP DMV+V L +S Sbjct: 87 VQDACNALHPEASVIYVPPPGAASAILEAIEAEVPLVVCITEGIPQQDMVKVVDALNSQS 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ + CKIGIMPG I KG +GI+SRSGTLTYEAV QT++ GLGQ+ Sbjct: 147 KTRLVGPNCPGVIKAEECKIGIMPGHIHTKGRIGIVSRSGTLTYEAVNQTTKAGLGQTLV 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKPI 239 GIGGDP GT FID L++FL DE+T+ I+++GEIGGSAEEEA++FLK R KP+ Sbjct: 207 YGIGGDPFNGTNFIDALKIFLNDESTDGIILIGEIGGSAEEEASEFLKQYNLTRKVPKPV 266 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 V F+AG+TAPPGR MGHAGA+++GGKGGA+DK+ A++ AG+ ++ SPA++G L Sbjct: 267 VSFIAGRTAPPGRRMGHAGAIVAGGKGGADDKVKALRSAGVVVSASPAQMGEKL 320 >gi|261377714|ref|ZP_05982287.1| succinyl-CoA synthetase subunit alpha [Neisseria cinerea ATCC 14685] gi|269145989|gb|EEZ72407.1| succinyl-CoA synthetase subunit alpha [Neisseria cinerea ATCC 14685] Length = 296 Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 165/299 (55%), Positives = 224/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG ++N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE + Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVL 290 >gi|298369258|ref|ZP_06980576.1| succinate-CoA ligase, alpha subunit [Neisseria sp. oral taxon 014 str. F0314] gi|298283261|gb|EFI24748.1| succinate-CoA ligase, alpha subunit [Neisseria sp. oral taxon 014 str. F0314] Length = 296 Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 165/299 (55%), Positives = 224/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG ++N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE + Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGSTILEVL 290 >gi|104782657|ref|YP_609155.1| succinyl-CoA synthetase subunit alpha [Pseudomonas entomophila L48] gi|95111644|emb|CAK16365.1| succinyl-CoA synthetase alpha chain [Pseudomonas entomophila L48] Length = 294 Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 172/298 (57%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A+ASVIYVP D+I+E+ I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKEAVEATGADASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVTLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|294935591|ref|XP_002781462.1| Succinyl-CoA ligase, putative [Perkinsus marinus ATCC 50983] gi|239892158|gb|EER13257.1| Succinyl-CoA ligase, putative [Perkinsus marinus ATCC 50983] Length = 334 Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 185/298 (62%), Positives = 231/298 (77%), Gaps = 7/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFTT 61 + VDKNTKV+ QGLTGK GTFHT QAI Y T++VGG++PKK G+T+ GG ++P+F Sbjct: 32 VWVDKNTKVICQGLTGKQGTFHTAQAIEY-GTKMVGGVNPKKAGTTHHVGGK-DLPIFAN 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS- 120 V EA+E T A+ASVIYVPPSGA A +E+IEAEIPL+VCITEGIP DMV+VKA L+ + Sbjct: 90 VMEAREATGADASVIYVPPSGAASACLEAIEAEIPLVVCITEGIPQHDMVKVKAALKMAG 149 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RLIGPNCPGI+ P+ CKIGIMPG I +KG +G++SRSGTLTYEAV QT++ GLGQST Sbjct: 150 GRTRLIGPNCPGIIKPEECKIGIMPGYIHKKGKIGVVSRSGTLTYEAVNQTTEVGLGQST 209 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT FID LE F+ D TE I+++GEIGG+AEEEAA++LK+ K KP+ Sbjct: 210 VVGIGGDPFNGTNFIDCLERFVQDPQTEGIILIGEIGGAAEEEAAEWLKEHNK--NNKPV 267 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V F+AG TAPPGR MGHAGA+ISGGKG A KI A++ G + SPA +G ++E+ Sbjct: 268 VSFIAGVTAPPGRRMGHAGAIISGGKGTAATKIAALEGCGASVVRSPADLGVRMLEMY 325 >gi|82703116|ref|YP_412682.1| succinyl-CoA synthetase subunit alpha [Nitrosospira multiformis ATCC 25196] gi|82411181|gb|ABB75290.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nitrosospira multiformis ATCC 25196] Length = 292 Score = 325 bits (834), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 161/300 (53%), Positives = 220/300 (73%), Gaps = 10/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTE--QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPV 58 M+IL+D+NT+++ QG+TGK G FHT + Y + V G++PKKG + G +P+ Sbjct: 1 MAILIDRNTRIMTQGITGKTGQFHTRMCRDYAYGKECFVAGVNPKKGGEDFDG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV EAK+ T A SVIYVPP A AI E+++AE+ L++CITEGIPV DM+R R+E Sbjct: 57 FGTVEEAKQATGAAVSVIYVPPPFAAAAIDEAVDAELDLVICITEGIPVRDMIRTCHRME 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPGI+TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ LGQS Sbjct: 117 GKKTRLVGPNCPGIITPDEIKIGIMPGYIHRKGRIGVVSRSGTLTYEAVAQLMEQELGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDPV G DV++LF D+ T++++MVGEIGG+ EE+ A+++K+ +KP Sbjct: 177 TCIGIGGDPVNGLRHRDVMKLFNEDDETDAVLMVGEIGGTDEEDCARWVKENM----RKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAPPGR MGHAGAVISGG+G A++K+ ++E GI +A +PA +G+ L LG Sbjct: 233 VVGYIAGLTAPPGRRMGHAGAVISGGRGTAQEKLAVLEECGIKVARNPAEMGKVLKSALG 292 >gi|26990877|ref|NP_746302.1| succinyl-CoA synthetase subunit alpha [Pseudomonas putida KT2440] gi|148546907|ref|YP_001267009.1| succinyl-CoA synthetase subunit alpha [Pseudomonas putida F1] gi|167034751|ref|YP_001669982.1| succinyl-CoA synthetase subunit alpha [Pseudomonas putida GB-1] gi|170722672|ref|YP_001750360.1| succinyl-CoA synthetase subunit alpha [Pseudomonas putida W619] gi|325275364|ref|ZP_08141312.1| succinyl-CoA synthetase subunit alpha [Pseudomonas sp. TJI-51] gi|24985890|gb|AAN69766.1|AE016613_1 succinyl-CoA synthetase, alpha subunit [Pseudomonas putida KT2440] gi|148510965|gb|ABQ77825.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Pseudomonas putida F1] gi|166861239|gb|ABY99646.1| succinyl-CoA synthetase, alpha subunit [Pseudomonas putida GB-1] gi|169760675|gb|ACA73991.1| succinyl-CoA synthetase, alpha subunit [Pseudomonas putida W619] gi|313497969|gb|ADR59335.1| SucD [Pseudomonas putida BIRD-1] gi|324099508|gb|EGB97406.1| succinyl-CoA synthetase subunit alpha [Pseudomonas sp. TJI-51] Length = 294 Score = 325 bits (834), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 172/298 (57%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A+ASVIYVP D+I+E+ I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKEAVEATGADASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVTLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|152996808|ref|YP_001341643.1| succinyl-CoA synthetase subunit alpha [Marinomonas sp. MWYL1] gi|150837732|gb|ABR71708.1| succinyl-CoA synthetase, alpha subunit [Marinomonas sp. MWYL1] Length = 290 Score = 325 bits (834), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A ASVIYVP D+I+E+ + I LIVCITEG+P LDM+ K + ++ Sbjct: 56 TVKEAVEQTGAEASVIYVPAPFCKDSILEAANSGIKLIVCITEGVPTLDMLDCKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHMPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG +L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGSALKEITG 289 >gi|225320699|dbj|BAH29745.1| succinate-CoA ligase GDP forming alpha subunit [Dicyema japonicum] Length = 324 Score = 325 bits (834), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 160/297 (53%), Positives = 219/297 (73%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I ++KNT+V+ QG TG+ GTFH + ++ Y TQ+VGG+ P KG + G +PVF T Sbjct: 29 NIEINKNTRVICQGFTGRQGTFHCKASLDY-GTQIVGGVSPGKGGSMHMG----LPVFDT 83 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VA+AK T A AS+I+VP A AI E+I+AE+PL+VCITEGIP DM+ +K +L + Sbjct: 84 VAQAKAETGATASLIFVPAPVASAAIEEAIDAELPLVVCITEGIPQHDMIHIKKKLMAQK 143 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPGI+ PD C+IGIMP SI + G +GI+SRSGTLTYEAV QT++ GLGQ+ Sbjct: 144 ITRMIGPNCPGIIKPDQCRIGIMPSSIHKLGCIGIVSRSGTLTYEAVHQTTRNGLGQNLV 203 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL ++ + I+++GEIGG EE+AA++L K KP+ Sbjct: 204 VGIGGDPFSGTNFIDCLDIFLKNDQVKGILLIGEIGGDEEEKAAEYLLVNNKGPNAKPVA 263 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAPPGR MGHAGA+ISG KG A+ KI+A+KEAG+ + SPA++G ++ E + Sbjct: 264 SFIAGRTAPPGRRMGHAGAIISGNKGTADAKISALKEAGVNVTLSPAQMGSAMFEAM 320 >gi|298916884|dbj|BAJ09739.1| succinate-CoA ligase GDP forming alpha subunit [Dicyema japonicum] Length = 323 Score = 325 bits (834), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 160/297 (53%), Positives = 219/297 (73%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I ++KNT+V+ QG TG+ GTFH + ++ Y TQ+VGG+ P KG + G +PVF T Sbjct: 28 NIEINKNTRVICQGFTGRQGTFHCKASLDY-GTQIVGGVSPGKGGSMHMG----LPVFDT 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VA+AK T A AS+I+VP A AI E+I+AE+PL+VCITEGIP DM+ +K +L + Sbjct: 83 VAQAKAETGATASLIFVPAPVASAAIEEAIDAELPLVVCITEGIPQHDMIHIKKKLMAQK 142 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPGI+ PD C+IGIMP SI + G +GI+SRSGTLTYEAV QT++ GLGQ+ Sbjct: 143 ITRMIGPNCPGIIKPDQCRIGIMPSSIHKLGCIGIVSRSGTLTYEAVHQTTRNGLGQNLV 202 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL ++ + I+++GEIGG EE+AA++L K KP+ Sbjct: 203 VGIGGDPFSGTNFIDCLDIFLKNDQVKGILLIGEIGGDEEEKAAEYLLVNNKGPNAKPVA 262 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAPPGR MGHAGA+ISG KG A+ KI+A+KEAG+ + SPA++G ++ E + Sbjct: 263 SFIAGRTAPPGRRMGHAGAIISGNKGTADAKISALKEAGVNVTLSPAQMGSAMFEAM 319 >gi|17553126|ref|NP_497288.1| hypothetical protein F23H11.3 [Caenorhabditis elegans] gi|2088859|gb|AAC71132.1| Hypothetical protein F23H11.3 [Caenorhabditis elegans] Length = 321 Score = 325 bits (834), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 170/297 (57%), Positives = 223/297 (75%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +++++K+TKV+VQG TG+ GTFH++Q + Y T +VGG+ P K G +PVF + Sbjct: 28 NLMINKSTKVIVQGFTGRQGTFHSKQMLEY-NTNLVGGVSPNKAGQTHLG----LPVFGS 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+RT A+A+VIYVP +GA AI E+++AEI LIV ITEGIP DMVRVK RL +++ Sbjct: 83 VAEAKDRTGADATVIYVPAAGAARAIHEAMDAEIGLIVAITEGIPQQDMVRVKNRLLKQN 142 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 143 KSRLLGPNCPGIIASGDCKIGIMPGHIHKKGCIGIVSRSGTLTYEAVHQTTTVGLGQTRC 202 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL DE T+ I+++GEIGG AEE+AA+FLK KP+V Sbjct: 203 IGIGGDPFNGTNFIDCLEVFLEDEQTKGIILIGEIGGQAEEQAAEFLKSRNSGSNAKPVV 262 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+I+GGKG A DKI A++ A + + SPA++G ++ + L Sbjct: 263 SFIAGVTAPPGRRMGHAGAIIAGGKGTAGDKIEALRNANVVVTDSPAKLGVAMQKAL 319 >gi|42525135|ref|NP_970515.1| succinyl-CoA synthetase alpha chain [Bdellovibrio bacteriovorus HD100] gi|39577346|emb|CAE81169.1| succinyl-CoA synthetase alpha chain [Bdellovibrio bacteriovorus HD100] Length = 290 Score = 325 bits (833), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 170/297 (57%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++KNTKV+ QG TG GTFH+EQA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MAILINKNTKVICQGFTGAQGTFHSEQALAY-GTKMVGGVTPGKGGTTHIG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T NASVI+VPP A D+I+E+++A++ L++CITEGIPVLDMV+VK ++ Sbjct: 56 TVKEAKAATGCNASVIFVPPPFAADSIMEAVDADLDLVICITEGIPVLDMVKVKEYMKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CKIGIMPG I + G +G+LSRSGTLTYEAV Q + G+GQST Sbjct: 116 RTRLVGPNCPGVITPGECKIGIMPGHIHKPGRIGVLSRSGTLTYEAVGQLTALGIGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+LF D T+ ++M+GEIGG+AEEEAA+++K KKP+ Sbjct: 176 VGIGGDPVNGTNFIDVLKLFNEDPDTDGVIMIGEIGGTAEEEAAEYIKAH----FKKPVT 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG AP G+ MGHAGA+ISGGKG AE K A++ AG I+ SPA +G ++ +L Sbjct: 232 AFIAGAAAPAGKRMGHAGAIISGGKGTAEAKFKALEAAGCKISRSPADMGTTMQSML 288 >gi|254283561|ref|ZP_04958529.1| succinyl-CoA ligase, alpha subunit [gamma proteobacterium NOR51-B] gi|219679764|gb|EED36113.1| succinyl-CoA ligase, alpha subunit [gamma proteobacterium NOR51-B] Length = 290 Score = 325 bits (833), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 214/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSILINSETKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP D+I+E+ A + LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVVDAVEATGAQASVIYVPAPFCKDSILEAANAGLELIVCITEGIPTLDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHQPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LELF D ATE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILELFEKDPATEAIVMIGEIGGTAEEEAAAYIKANV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG +L E+ G Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLAEIGSALSEITG 289 >gi|254514205|ref|ZP_05126266.1| succinyl-CoA ligase, alpha subunit [gamma proteobacterium NOR5-3] gi|219676448|gb|EED32813.1| succinyl-CoA ligase, alpha subunit [gamma proteobacterium NOR5-3] Length = 290 Score = 325 bits (833), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSILINKDTKVICQGFTGSQGTFHSEQAIEY-GTKMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E T A+ASVIYVP D+I+E+ + L+VCITEGIP LDM+ K + ++ Sbjct: 56 TVAEAVEATGADASVIYVPAPFCKDSILEAANGGVKLVVCITEGIPTLDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QTS G GQST Sbjct: 116 GVRLVGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTSDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L +F AD ATE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILAMFEADPATEAIVMIGEIGGTAEEEAAAYIKANV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG L E+ G Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLADIGAGLKEITG 289 >gi|170769497|ref|ZP_02903950.1| succinate-CoA ligase, alpha subunit [Escherichia albertii TW07627] gi|170121554|gb|EDS90485.1| succinate-CoA ligase, alpha subunit [Escherichia albertii TW07627] Length = 290 Score = 325 bits (833), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 167/298 (56%), Positives = 219/298 (73%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+VLVQG+TGK GTFHTEQAI Y TQ+VGG+ P KG +++ PVF Sbjct: 1 MSVLINKHTRVLVQGITGKNGTFHTEQAIAY-GTQIVGGVTPGKGGQR----HLDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 ++ EA +T A+ASVIYVP D+++E++E+ + LIV ITEG+P LDMV+V+ L+ Sbjct: 56 SMKEAMRQTEADASVIYVPAPFVLDSVVEAVESGVKLIVVITEGVPTLDMVKVRRLLDCH 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPGI+TP CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PDVRLIGPNCPGIITPGECKIGIMPGEIHRPGRIGIVSRSGTLTYEAVAQTTALGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FID L LF D T++++M+GEIGG+AEE AA+F+ E KP+ Sbjct: 176 CIGIGGDPVPGTNFIDALRLFENDPQTDAVIMIGEIGGNAEERAAEFIHHEM----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VG++AG TAP G+ MGHAGA+ISGG G AE+K A +AG+ +PA +G +L ++ Sbjct: 232 VGYIAGVTAPKGKRMGHAGAIISGGSGSAEEKFRAFDKAGMAWTRNPALLGDTLWNVI 289 >gi|262375859|ref|ZP_06069091.1| succinyl-CoA synthetase subunit alpha [Acinetobacter lwoffii SH145] gi|262309462|gb|EEY90593.1| succinyl-CoA synthetase subunit alpha [Acinetobacter lwoffii SH145] Length = 296 Score = 325 bits (833), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 167/299 (55%), Positives = 223/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG ++ +PVF Sbjct: 1 MSVLVNKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQT----HLELPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A+ASVIYVP D+I+E++++ I LIV ITEG+P +DM++ K LE + Sbjct: 56 TMREAVKETGADASVIYVPAPFVLDSIVEAVDSGIELIVVITEGVPTIDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RLIGPNCPGI+TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLIGPNCPGIITPGECKIGIMPGHIHQPGKIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D TE+I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDCLKLFQEDPQTEAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A + AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFERAGMAYTRSPAELGSTMLQVL 290 >gi|222053359|ref|YP_002535721.1| succinyl-CoA synthetase, alpha subunit [Geobacter sp. FRC-32] gi|221562648|gb|ACM18620.1| succinyl-CoA synthetase, alpha subunit [Geobacter sp. FRC-32] Length = 290 Score = 325 bits (833), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 165/297 (55%), Positives = 217/297 (73%), Gaps = 10/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QGL G G FH A Y TQ+VGG+ P KG T G PVF Sbjct: 1 MSILIDKNTKVITQGL-GATGLFHANGARDY-GTQMVGGVTPGKGGTTIEG----FPVFD 54 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A ASVIYVPP A DAI+E+++A I L+ CITEGIPVLDMV+VK ++ Sbjct: 55 TVKEAVYKTGATASVIYVPPPFAADAIMEAVDAGIDLVCCITEGIPVLDMVKVKQYMQGK 114 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CKIGIMPG I + G +G++SRSGTLTYEAV+Q + GLGQST Sbjct: 115 RTRLVGPNCPGVITPGQCKIGIMPGYIHKPGKIGVVSRSGTLTYEAVWQLTNVGLGQSTC 174 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV G+ +DVL++F D TE+++M+GEIGG++EEE A F+K+ KP+ Sbjct: 175 VGIGGDPVNGSSHLDVLKMFEEDPGTEAVIMIGEIGGTSEEEGAYFVKEH----MTKPVA 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAPPG+ MGHAGA+ISGGKG A +K+ +++ GI +A SPA + ++L+++ Sbjct: 231 AYIAGVTAPPGKRMGHAGAIISGGKGTAAEKVAVLEDCGIAVAASPADMAQALLKVY 287 >gi|114563511|ref|YP_751024.1| succinyl-CoA synthetase, alpha subunit [Shewanella frigidimarina NCIMB 400] gi|114334804|gb|ABI72186.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella frigidimarina NCIMB 400] Length = 290 Score = 325 bits (832), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 174/293 (59%), Positives = 217/293 (74%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A A+VIYVP DAI+E+I+A + LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVAATGATATVIYVPAPFCKDAILEAIDAGLELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGNAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKAL 284 >gi|291612997|ref|YP_003523154.1| succinyl-CoA synthetase, subunit alpha [Sideroxydans lithotrophicus ES-1] gi|291583109|gb|ADE10767.1| succinyl-CoA synthetase, alpha subunit [Sideroxydans lithotrophicus ES-1] Length = 293 Score = 325 bits (832), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 163/299 (54%), Positives = 218/299 (72%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G +PV Sbjct: 1 MSILINKDTKVITQGMTGKVGQFHTFHCKQYANGANCFVAGVNPKKVGEQFEG----IPV 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TV +AKE T A SVIYVPPSGA AI E++EAE+ L++CITEGIPV DM++ + +++ Sbjct: 57 YATVRDAKEATGATVSVIYVPPSGAAAAIDEAVEAELDLVICITEGIPVHDMLKTRYKMQ 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q + G GQS Sbjct: 117 GKRTLLIGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLTALGYGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + VGIGGDP+ G + IDV++LF D T++++MVGEIGGS EEE A+++K KKP Sbjct: 177 SCVGIGGDPINGLKHIDVMKLFNDDPETDAVIMVGEIGGSDEEECARWIKGNM----KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG TAP G+ MGHAGA+ISGG+GGA DK+ M+E GI I +PA +GR++ ++L Sbjct: 233 VVGFIAGVTAPEGKRMGHAGAIISGGQGGANDKLAVMEECGIQITRNPAEMGRTMQKVL 291 >gi|87119163|ref|ZP_01075061.1| succinyl-CoA synthetase alpha subunit [Marinomonas sp. MED121] gi|86165554|gb|EAQ66821.1| succinyl-CoA synthetase alpha subunit [Marinomonas sp. MED121] Length = 290 Score = 325 bits (832), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 213/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+ + I LIVCITEGIP LDM+ K ++ Sbjct: 56 TVREAVEETGAEASVIYVPAPFCKDSILEAANSGIKLIVCITEGIPTLDMLDCKVACDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLELF D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLELFQNDPKTEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG +L EL G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLADIGDALKELTG 289 >gi|148652082|ref|YP_001279175.1| succinyl-CoA synthetase subunit alpha [Psychrobacter sp. PRwf-1] gi|148571166|gb|ABQ93225.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Psychrobacter sp. PRwf-1] Length = 291 Score = 325 bits (832), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 167/299 (55%), Positives = 221/299 (73%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DK+TKVLVQG TGK GTFH+EQAI Y T+VVGG+ P KG G +PVF Sbjct: 1 MSVLIDKDTKVLVQGFTGKNGTFHSEQAIEY-GTKVVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA E T A+ASVIYVP D+IIE+++A + LIV ITEG+P LDM++ K +E++ Sbjct: 56 TMAEAMEATQADASVIYVPAPFVLDSIIEAVDAGVKLIVVITEGVPTLDMLKAKRYIEEA 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +++GPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT++ G GQST Sbjct: 116 GDVKMVGPNCPGVITPGQCKIGIMPGHIHLPGKVGIISRSGTLTYEAVAQTTKLGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G ID L++F D TE+IV++GEIGG+AEEEAA ++K+ KP+ Sbjct: 176 CIGIGGDPIPGMNQIDCLKMFQEDPQTEAIVLIGEIGGTAEEEAAAYIKEHV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +G++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI P++IG ++ ++ G Sbjct: 232 IGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFKAFEDAGIAYTRDPSKIGETVKQVTG 290 >gi|157835442|pdb|2NUA|A Chain A, C123av Mutant Of E. Coli Succinyl-Coa Synthetase gi|157835444|pdb|2NUA|D Chain D, C123av Mutant Of E. Coli Succinyl-Coa Synthetase Length = 288 Score = 325 bits (832), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 171/296 (57%), Positives = 216/296 (72%), Gaps = 9/296 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 SIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF T Sbjct: 1 SILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFNT 55 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 VREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPN PG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST V Sbjct: 116 VRMIGPNVPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+VG Sbjct: 176 GIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 YIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 287 >gi|157835426|pdb|2NU7|A Chain A, C123as Mutant Of E. Coli Succinyl-Coa Synthetase gi|157835428|pdb|2NU7|D Chain D, C123as Mutant Of E. Coli Succinyl-Coa Synthetase Length = 288 Score = 325 bits (832), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 171/296 (57%), Positives = 216/296 (72%), Gaps = 9/296 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 SIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF T Sbjct: 1 SILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFNT 55 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 VREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPN PG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST V Sbjct: 116 VRMIGPNSPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+VG Sbjct: 176 GIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 YIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 287 >gi|254786518|ref|YP_003073947.1| succinyl-CoA ligase, subunit alpha [Teredinibacter turnerae T7901] gi|237685623|gb|ACR12887.1| succinyl-CoA ligase, alpha subunit [Teredinibacter turnerae T7901] Length = 290 Score = 325 bits (832), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 168/298 (56%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K TKVL QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLINKETKVLCQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA T A+ASVIYVP D+I+E+ + + L+VCITEGIP +DM+ K + ++ Sbjct: 56 TMAEAVAETGADASVIYVPAPFCKDSILEAAHSGVKLVVCITEGIPTMDMLDCKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG +L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLANIGDALKEVTG 289 >gi|157835430|pdb|2NU8|A Chain A, C123at Mutant Of E. Coli Succinyl-Coa Synthetase gi|157835432|pdb|2NU8|D Chain D, C123at Mutant Of E. Coli Succinyl-Coa Synthetase Length = 288 Score = 325 bits (832), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 171/296 (57%), Positives = 216/296 (72%), Gaps = 9/296 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 SIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF T Sbjct: 1 SILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFNT 55 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 VREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPN PG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST V Sbjct: 116 VRMIGPNTPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+VG Sbjct: 176 GIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 YIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 287 >gi|308499010|ref|XP_003111691.1| hypothetical protein CRE_03008 [Caenorhabditis remanei] gi|308239600|gb|EFO83552.1| hypothetical protein CRE_03008 [Caenorhabditis remanei] Length = 321 Score = 325 bits (832), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 221/297 (74%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +++++K+TKV+VQG TG+ GTFH++Q + Y T VVGG+ P K G +PVF T Sbjct: 28 NLMINKSTKVIVQGFTGRQGTFHSKQMLEY-NTNVVGGVSPNKAGQTHLG----LPVFGT 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAKERT A+A+VIYVP +GA AI E+++AEI LIV ITEGIP DMVRVK RL +++ Sbjct: 83 VAEAKERTGADATVIYVPAAGAARAIHEAMDAEIGLIVAITEGIPQQDMVRVKNRLLKQN 142 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 143 KSRLLGPNCPGIIASGDCKIGIMPGHIHKKGCIGIVSRSGTLTYEAVHQTTAVGLGQTRC 202 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D T+ I+++GEIGG AEE+AA FLK KP+V Sbjct: 203 IGIGGDPFNGTNFIDCLEVFLEDNETKGIILIGEIGGQAEEQAADFLKSRNSGPNAKPVV 262 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+I+GGKG A DKI A++ A + + SPA++G ++ + L Sbjct: 263 SFIAGVTAPPGRRMGHAGAIIAGGKGTAGDKIEALRNANVVVTDSPAKLGVAMQKAL 319 >gi|325981978|ref|YP_004294380.1| succinyl-CoA synthetase, alpha subunit [Nitrosomonas sp. AL212] gi|325531497|gb|ADZ26218.1| succinyl-CoA synthetase, alpha subunit [Nitrosomonas sp. AL212] Length = 291 Score = 325 bits (832), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 160/300 (53%), Positives = 221/300 (73%), Gaps = 12/300 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVN-VP 57 MSIL+++N++V+ QG+TGK G FHT Y V G++P+K G NV +P Sbjct: 1 MSILINRNSRVITQGITGKTGQFHTRMCRDYANGNACFVAGVNPRK-----PGENVEGIP 55 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 V+ +V EA+++T AN SVIYVPP A AI E++EAE+ L++CITEGIPV DM+R + ++ Sbjct: 56 VYASVKEAQQQTGANVSVIYVPPPFAAAAIDEAVEAELDLVICITEGIPVRDMIRTRYKM 115 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + +RLIGPNCPGI+TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q + GLGQ Sbjct: 116 QGKKTRLIGPNCPGIITPDEIKIGIMPGYIHKKGRIGVVSRSGTLTYEAVAQLMEMGLGQ 175 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 ST +GIGGDPV G + +DV++LF D+ T++++MVGEIGG+ EE+ A+++KD +K Sbjct: 176 STCIGIGGDPVNGLKHLDVIQLFNDDDETDAVLMVGEIGGTDEEDCARWVKDHM----RK 231 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+VGF+AG TAPPG+ MGHAGA+ISGGKG A++K+ M+ GI I +PA +G+ L +L Sbjct: 232 PVVGFIAGVTAPPGKRMGHAGAIISGGKGTAQEKLEVMESCGIKITRNPAEMGKLLKSVL 291 >gi|254480392|ref|ZP_05093639.1| succinate-CoA ligase, alpha subunit subfamily [marine gamma proteobacterium HTCC2148] gi|214038975|gb|EEB79635.1| succinate-CoA ligase, alpha subunit subfamily [marine gamma proteobacterium HTCC2148] Length = 290 Score = 325 bits (832), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 170/298 (57%), Positives = 214/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGSQGTFHSEQAIEY-GTKMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A+ASVIYVP D+I+E+ + LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVVEAVAATGADASVIYVPAPFCKDSILEAANGGVKLIVCITEGIPTLDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLVGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D ATE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFQNDPATEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG +L E+ G Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLAEIGTALGEITG 289 >gi|218768043|ref|YP_002342555.1| succinyl-CoA synthetase subunit alpha [Neisseria meningitidis Z2491] gi|121052051|emb|CAM08360.1| putative succinyl-CoA synthetase alpha subunit [Neisseria meningitidis Z2491] Length = 296 Score = 325 bits (832), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 164/299 (54%), Positives = 224/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG ++++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE + Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----SKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVL 290 >gi|78188444|ref|YP_378782.1| succinyl-CoA ligase, alpha subunit [Chlorobium chlorochromatii CaD3] gi|78170643|gb|ABB27739.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Chlorobium chlorochromatii CaD3] Length = 299 Score = 324 bits (831), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 174/303 (57%), Positives = 231/303 (76%), Gaps = 10/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T++LVQG+TG GTFHT Q IL T VV G+ P KG T + G + + Sbjct: 1 MSVLVNKDTRLLVQGITGGEGTFHTSQ-ILEYGTNVVAGVTPGKGGTLYHGNDKDKFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV +A E+T AN SVI+VP A DAI+E+ +A + +I+CITEGIPV DM++ A Sbjct: 60 VPVFNTVRDAVEKTEANVSVIFVPAPFAADAIMEAADAGLKVIICITEGIPVNDMMKAYA 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + L+GPNCPG++TP K+GIMPG I +KG++G++SRSGTLTYEAV Q +Q GL Sbjct: 120 FVQQKGAILVGPNCPGVITPGEAKVGIMPGFIHKKGTIGVVSRSGTLTYEAVHQLTQVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT FID ++LF AD+ TE +VM+GEIGGSAEEEAA ++K+ Sbjct: 180 GQSTCIGIGGDPIIGTRFIDAVKLFAADDETEGLVMIGEIGGSAEEEAAAYIKENF---- 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG A +KI AM+EAGI + SPA IG ++++ Sbjct: 236 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAVEKIRAMEEAGIHVVESPADIGEAMIK 295 Query: 296 LLG 298 LG Sbjct: 296 ALG 298 >gi|114330249|ref|YP_746471.1| succinyl-CoA synthetase subunit alpha [Nitrosomonas eutropha C91] gi|114307263|gb|ABI58506.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nitrosomonas eutropha C91] Length = 291 Score = 324 bits (831), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 161/295 (54%), Positives = 220/295 (74%), Gaps = 10/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPV 58 M+IL+D++T+V+ QG+TGK G FHT Q Y + V G++PKK + G +PV Sbjct: 1 MAILIDRHTRVMTQGITGKTGQFHTRQCREYAFGRDCFVAGVNPKKAGEDFEG----IPV 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV A++ T A SVIYVPP+ A AI E++EAE+ L++CITEGIPV DM+R +AR+ Sbjct: 57 FATVEAARQTTGATVSVIYVPPAYAAAAIDEAVEAELDLVICITEGIPVRDMLRTRARMR 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 ++LIGPNCPG++TP KIGIMPG+I ++G +G++SRSGTLTYEAV Q S+ GLGQS Sbjct: 117 GKKTQLIGPNCPGVITPGELKIGIMPGAIHQQGRIGVVSRSGTLTYEAVAQLSELGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G + ID+L+LF D+ T++++MVGEIGG+ EEE+A ++KD KKP Sbjct: 177 TCIGIGGDPINGLKHIDILKLFNEDDGTDAVLMVGEIGGTDEEESAHWVKDHM----KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 +VGFVAG TAPPG+ MGHAGA+I+GGKG A++KI M+ GI +A +PA +G+ L Sbjct: 233 VVGFVAGMTAPPGKRMGHAGAIIAGGKGTAQEKIEVMEACGIHVARNPAEMGKLL 287 >gi|194098454|ref|YP_002001513.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae NCCP11945] gi|239998852|ref|ZP_04718776.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae 35/02] gi|240128083|ref|ZP_04740744.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae SK-93-1035] gi|241760343|ref|ZP_04758438.1| succinate-CoA ligase, alpha subunit family [Neisseria flavescens SK114] gi|268594695|ref|ZP_06128862.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae 35/02] gi|268686472|ref|ZP_06153334.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae SK-93-1035] gi|193933744|gb|ACF29568.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae NCCP11945] gi|241319221|gb|EER55699.1| succinate-CoA ligase, alpha subunit family [Neisseria flavescens SK114] gi|268548084|gb|EEZ43502.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae 35/02] gi|268626756|gb|EEZ59156.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae SK-93-1035] gi|317164140|gb|ADV07681.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae TCDC-NG08107] Length = 296 Score = 324 bits (831), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 164/299 (54%), Positives = 224/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG ++++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE + Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVL 290 >gi|170571090|ref|XP_001891596.1| succinyl-CoA ligase [GDP-forming] alpha-chain, mitochindrial, putative [Brugia malayi] gi|158603822|gb|EDP39602.1| succinyl-CoA ligase [GDP-forming] alpha-chain, mitochindrial, putative [Brugia malayi] Length = 325 Score = 324 bits (831), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 168/297 (56%), Positives = 221/297 (74%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV++QG TGK TFH +Q I Y T VVGG+ P K T ++ PVF T Sbjct: 30 ALRINKDTKVIIQGFTGKQATFHGQQMINY-NTNVVGGVSPNKAGTM----HLERPVFGT 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA+E T A+ASVIYVP A AI E+I+AEIPL+VC+TEG+P DMV+V+ RL K + Sbjct: 85 VKEAREATGADASVIYVPARFAAKAIDEAIDAEIPLVVCVTEGVPQQDMVKVRNRLMKQN 144 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P+ CKIGIMPG I RKG++G++SRSGTLTYEAV QT+ GLGQ+ Sbjct: 145 KTRLLGPNCPGIICPEECKIGIMPGHIHRKGTIGVVSRSGTLTYEAVHQTTVCGLGQTLC 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+++GEIGG EE+AA+FLK+ KP+V Sbjct: 205 VGIGGDPFNGTNFIDCLDIFLRDPQTKGIILIGEIGGQDEEKAAEFLKENNSGSNAKPVV 264 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAPPGR MGHAGA+I+GGKG A DKI A+K G+ ++ SPA++G + + L Sbjct: 265 SFIAGQTAPPGRRMGHAGAIIAGGKGTAADKIEALKSVGVLVSASPAQMGAMMAKAL 321 >gi|58269516|ref|XP_571914.1| succinyl-coa ligase subunit alpha [Cryptococcus neoformans var. neoformans JEC21] gi|134114083|ref|XP_774289.1| hypothetical protein CNBG2700 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256924|gb|EAL19642.1| hypothetical protein CNBG2700 [Cryptococcus neoformans var. neoformans B-3501A] gi|57228150|gb|AAW44607.1| succinyl-coa ligase alpha-chain, mitochondrial precursor, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 333 Score = 324 bits (831), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 220/298 (73%), Gaps = 8/298 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +IL++K+TKVLVQG TGK GTFH +QAI Y T+++GG +PKK G +PVF T Sbjct: 36 NILINKDTKVLVQGFTGKTGTFHAQQAIEYG-TKMIGGTNPKKAGQTHLG----LPVFGT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A +ASVIYVPP A DAIIE+IE EI LIV ITEGIP D +++ L+ +S Sbjct: 91 VRDAVREAQPDASVIYVPPPFAADAIIEAIENEIKLIVTITEGIPQRDQIKIMNVLKSQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR+IG NCPGI++ + CK+GIMPG IF +G +G++SRSGTLTYEAV QT+ GLGQS Sbjct: 151 KSRMIGGNCPGIIS-EGCKMGIMPGHIFTQGKIGVVSRSGTLTYEAVNQTTLAGLGQSLT 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPI 239 VGIGGDP GT+ IDV+++ LAD TE IV++GEIGGS EEEAA +L+ K KP+ Sbjct: 210 VGIGGDPFPGTQHIDVVKVLLADPRTEGIVLIGEIGGSMEEEAAAYLEQHNKNSANPKPV 269 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V F+AG+TAPPGR MGHAGA+ISGGKG A DK+ A+++AG IA SPA+IG +++ + Sbjct: 270 VAFIAGRTAPPGRRMGHAGAIISGGKGAASDKVAALEKAGAIIAKSPAQIGDLMLKAM 327 >gi|195016311|ref|XP_001984386.1| GH16428 [Drosophila grimshawi] gi|193897868|gb|EDV96734.1| GH16428 [Drosophila grimshawi] Length = 328 Score = 324 bits (831), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 169/300 (56%), Positives = 230/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLNGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 VA+AK+ T +A+VIYVPP GA AI+E+++AEIPLIVCITEG+P DMV+VK A + + Sbjct: 86 VADAKKATDPHATVIYVPPPGAAAAIMEALDAEIPLIVCITEGVPQHDMVKVKHALISQD 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLTEFNTGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 266 SFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGYELFKEMTRL 325 >gi|304387735|ref|ZP_07369915.1| succinyl-CoA synthetase subunit alpha [Neisseria meningitidis ATCC 13091] gi|304338211|gb|EFM04341.1| succinyl-CoA synthetase subunit alpha [Neisseria meningitidis ATCC 13091] Length = 296 Score = 324 bits (831), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 164/299 (54%), Positives = 224/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG ++++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE + Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVL 290 >gi|324501429|gb|ADY40637.1| Succinyl-CoA ligase [GDP-forming] subunit alpha [Ascaris suum] Length = 301 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 172/301 (57%), Positives = 223/301 (74%), Gaps = 7/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +++NTKV++QG TGK GTFH +Q I Y +T VV G+ P K T G P+F T Sbjct: 6 ALKINRNTKVIIQGFTGKQGTFHGQQMIDY-KTNVVAGVSPAKAGTTHLG----RPIFAT 60 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA+E T A+ASVIYVP A AI E+++AEIPL+VCITEGIP DMVRVK RL ++ Sbjct: 61 VKEAREATGADASVIYVPAPFAAAAINEAVDAEIPLVVCITEGIPQQDMVRVKNRLLRQN 120 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P+ CKIGIMPG I +KG +G++SRSGTLTYEAV QT+ GLGQ+ Sbjct: 121 KTRLLGPNCPGIIAPEECKIGIMPGHIHQKGIIGVVSRSGTLTYEAVHQTTLVGLGQTLC 180 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+++GEIGG AEE AA++L + KP+V Sbjct: 181 VGIGGDPFNGTNFIDCLDIFLKDPRTKGIILIGEIGGQAEERAAEYLIEHNSGANSKPVV 240 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE-LLGS 299 F+AG TAPPGR MGHAGA+ISGGKG A DKI A+K+AG+ ++ SPA++G + + L+G Sbjct: 241 AFIAGVTAPPGRRMGHAGAIISGGKGSATDKIEALKKAGVHVSASPAQMGTLMAKALIGR 300 Query: 300 L 300 L Sbjct: 301 L 301 >gi|320103225|ref|YP_004178816.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Isosphaera pallida ATCC 43644] gi|319750507|gb|ADV62267.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Isosphaera pallida ATCC 43644] Length = 294 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 169/301 (56%), Positives = 218/301 (72%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+ T+++ QG+TGK+G FH+EQ Y T++VGG+ P KG G +VPVF Sbjct: 1 MSILVNAETRLICQGITGKSGAFHSEQCRAY-GTKLVGGVTPGKGGQTTLG---DVPVFD 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 + EA + ANA++I+VPPSGA DAI+E+ +A I LIV ITEGIPVLDM R A L+ Sbjct: 57 SCHEAVAKVGANATMIFVPPSGAADAILEAADAGIALIVAITEGIPVLDMARAVAYLQAH 116 Query: 121 SS--RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RLIGPNCPG++TP CKIGIMPG I + G VG++SRSGTLTYEAV+Q + G+GQS Sbjct: 117 HPQVRLIGPNCPGVITPGQCKIGIMPGYIHQPGRVGVVSRSGTLTYEAVWQLTTLGIGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV GT F++VL +F D T++++M+GEIGG AEE AA F+K G KP Sbjct: 177 TCVGIGGDPVNGTSFVEVLRMFQEDPDTDAVIMMGEIGGDAEERAAAFVK---SGGFTKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + F+AG+TAPPG+ MGHAGA+ISGG G A DKI A++ AGI +A SPA +G +L +L Sbjct: 234 LAAFIAGQTAPPGKRMGHAGAIISGGSGKASDKIAALEAAGIKVARSPADMGTTLQSVLN 293 Query: 299 S 299 + Sbjct: 294 A 294 >gi|59801308|ref|YP_208020.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae FA 1090] gi|240014233|ref|ZP_04721146.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae DGI18] gi|240016669|ref|ZP_04723209.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae FA6140] gi|240080858|ref|ZP_04725401.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae FA19] gi|240115529|ref|ZP_04729591.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae PID18] gi|240117824|ref|ZP_04731886.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae PID1] gi|240121796|ref|ZP_04734758.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae PID24-1] gi|240123379|ref|ZP_04736335.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae PID332] gi|240125627|ref|ZP_04738513.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae SK-92-679] gi|260440660|ref|ZP_05794476.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae DGI2] gi|268596975|ref|ZP_06131142.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae FA19] gi|268601204|ref|ZP_06135371.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae PID18] gi|268603524|ref|ZP_06137691.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae PID1] gi|268682004|ref|ZP_06148866.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae PID332] gi|268684216|ref|ZP_06151078.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae SK-92-679] gi|291043968|ref|ZP_06569684.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae DGI2] gi|293399168|ref|ZP_06643333.1| succinyl-CoA ligase subunit alpha [Neisseria gonorrhoeae F62] gi|59718203|gb|AAW89608.1| putative succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae FA 1090] gi|268550763|gb|EEZ45782.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae FA19] gi|268585335|gb|EEZ50011.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae PID18] gi|268587655|gb|EEZ52331.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae PID1] gi|268622288|gb|EEZ54688.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae PID332] gi|268624500|gb|EEZ56900.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae SK-92-679] gi|291012431|gb|EFE04420.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae DGI2] gi|291610582|gb|EFF39692.1| succinyl-CoA ligase subunit alpha [Neisseria gonorrhoeae F62] Length = 296 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 164/299 (54%), Positives = 223/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG ++++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE + Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTNLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVL 290 >gi|167626464|ref|YP_001676964.1| succinyl-CoA synthetase subunit alpha [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596465|gb|ABZ86463.1| succinyl-CoA synthetase, alpha subunit [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 290 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 167/298 (56%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKVLVQG TGK GTFH+EQAI Y T +VGG+ P KG T +++ PVF Sbjct: 1 MSVLVDKNTKVLVQGFTGKNGTFHSEQAIAYG-TNIVGGVTPGKGGTT----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA T A+ASVIYVP D+ IE+I++ + L+V ITEG+P LDM+ VK L+ Sbjct: 56 TMAEAVAATGADASVIYVPAPFVKDSAIEAIDSGVKLVVIITEGVPTLDMLVVKEYLKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +++GPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT++ G GQST Sbjct: 116 DVQVVGPNCPGVITPGQCKIGIMPGHIHQPGKVGIISRSGTLTYEAVAQTTKLGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G I+ L+L D TE+I+++GEIGG+AEEEAA+++K KP++ Sbjct: 176 IGIGGDPIPGMNQIEALKLLENDPQTEAIILIGEIGGTAEEEAAEYIKHNV----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAPPG+ MGHAGA+ISGGKG A++K A + AGI SPA +G L E+ G Sbjct: 232 GYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAAFEAAGIAYTRSPAELGSKLKEVTG 289 >gi|325186353|emb|CCA20859.1| unnamed protein product [Albugo laibachii Nc14] Length = 325 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 175/296 (59%), Positives = 220/296 (74%), Gaps = 8/296 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + ++++T+V+ QG TGK GTFH+EQAI Y T++VGG+ PKKG + ++ +PVF +V Sbjct: 28 VWINEDTRVICQGFTGKQGTFHSEQAIAY-GTKMVGGVTPKKGGST----HLGLPVFNSV 82 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 +EAK T A+ASVIYVPP AII++IEAEIPL+V ITEGIP DMV+VK L + Sbjct: 83 SEAKRATNADASVIYVPPPFCAQAIIDAIEAEIPLVVAITEGIPQQDMVKVKWHLRQQKV 142 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CK+GIMPG I KG +GI+SRSGTLTYEAV QT+ GLGQST + Sbjct: 143 TRLIGPNCPGIIKPGECKMGIMPGYIHLKGKIGIVSRSGTLTYEAVAQTTSTGLGQSTVI 202 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE F D TE I+M+GEIGGSAEEEAA +L+ R KP+V Sbjct: 203 GIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAADWLQQYGD--RNKPVVS 260 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG AE K A++ AG+ + SPAR+G + EL+ Sbjct: 261 FIAGTTAPPGRRMGHAGAIVSGGKGTAEGKFKALEAAGVAVTRSPARLGELMAELM 316 >gi|315048319|ref|XP_003173534.1| succinyl-CoA ligase subunit alpha [Arthroderma gypseum CBS 118893] gi|311341501|gb|EFR00704.1| succinyl-CoA ligase subunit alpha [Arthroderma gypseum CBS 118893] Length = 330 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 175/294 (59%), Positives = 220/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++++TKV+ QG TGK GTFH +QAI Y T VVGG +PKK G PVF + Sbjct: 35 NLRINQDTKVIFQGFTGKQGTFHAQQAIDYG-TNVVGGTNPKKAGETHLGK----PVFAS 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + T A AS I+VPPS A +I ESI AE+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 90 VAEAVKETGATASAIFVPPSVAAKSIEESIAAEVPLVVCITEGIPQHDMVRITDMLKSQN 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 150 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA FLK E K KP V Sbjct: 210 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAAFLKSENK--ANKPAV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AG +APPGR MGHAGA++SGGKGGA+ KI A++EAG+ + SPA +G++L+ Sbjct: 268 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALQEAGVIVERSPAALGKTLL 321 >gi|255069881|ref|XP_002507022.1| succinate-coa ligase [Micromonas sp. RCC299] gi|226522297|gb|ACO68280.1| succinate-coa ligase [Micromonas sp. RCC299] Length = 326 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 184/297 (61%), Positives = 230/297 (77%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V+K+TKV+ QG TGK GTFH+EQAI Y T +VGG+ PKKG T G +PVF T Sbjct: 32 AVFVNKHTKVICQGFTGKNGTFHSEQAIAY-GTNMVGGVTPKKGGTTHLG----LPVFNT 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 VAEAK T ANAS IYVPP A AI+E++EAEI L+VCITEGIP DMVRVK A + +S Sbjct: 87 VAEAKAETGANASAIYVPPPFAAKAIMEAMEAEIDLVVCITEGIPQHDMVRVKQALMRQS 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +G++SRSGTLTYEAVFQT+Q GLGQST Sbjct: 147 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGVVSRSGTLTYEAVFQTTQVGLGQSTC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+F+D LE F+ D+ TE I+M+GEIGG+AEE+AA+F+K G KP+V Sbjct: 207 VGIGGDPFNGTDFVDCLERFVKDDETEGIIMIGEIGGNAEEQAAEFIKAS---GTTKPVV 263 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+I+GGKGGA+DKINA++ AG+ + SPA++G + ++ Sbjct: 264 SFIAGLTAPPGRRMGHAGAIIAGGKGGAQDKINALESAGVTVVKSPAQMGNVMYDIF 320 >gi|195125473|ref|XP_002007202.1| GI12510 [Drosophila mojavensis] gi|193918811|gb|EDW17678.1| GI12510 [Drosophila mojavensis] Length = 328 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 169/294 (57%), Positives = 226/294 (76%), Gaps = 6/294 (2%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF +VAEAK+ Sbjct: 37 DSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFASVAEAKK 91 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKSSSRLIG 126 T +A+VIYVPP GA AI+E+++AEIPLIVCITEG+P DMV+VK A + + SRL+G Sbjct: 92 ATDPHATVIYVPPPGAAAAIMEALDAEIPLIVCITEGVPQHDMVKVKHALVSQDKSRLVG 151 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ VGIGGD Sbjct: 152 PNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLCVGIGGD 211 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P GT+FID L++FL D T+ I+++GEIGG AEE+AA +L + + KP+V F+AG Sbjct: 212 PFNGTDFIDCLDVFLKDPETKGIILIGEIGGVAEEKAADYLTEFNTGIKAKPVVSFIAGV 271 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 272 SAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGYELFKEMKRL 325 >gi|320354456|ref|YP_004195795.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Desulfobulbus propionicus DSM 2032] gi|320122958|gb|ADW18504.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Desulfobulbus propionicus DSM 2032] Length = 291 Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 163/281 (58%), Positives = 208/281 (74%), Gaps = 10/281 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ V+KNT+++VQG+TG+ G FHT I Y T VV G+ P KG +VP+F Sbjct: 1 MSVFVNKNTRLVVQGITGQEGQFHTRSCIAY-GTNVVAGVTPGKGGQKMD----DVPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+E+T NAS+I VPP A DAI+E+ +A I L+VCITEG+PVLDM+RVK L Sbjct: 56 SVKEAREKTGCNASMILVPPPFAADAIMEAADAGIELVVCITEGVPVLDMMRVKNYLATK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS-VGILSRSGTLTYEAVFQTSQEGLGQST 179 ++RLIGPNCPGI+TP CKIGIMPG + + G G++SRSGTLTYEAV Q +Q G GQ+T Sbjct: 116 TTRLIGPNCPGIITPGECKIGIMPGPMHKPGGPWGVVSRSGTLTYEAVHQLTQAGFGQTT 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT F+D LE F AD T++IVM+GEIGG+AEE A +++K KKP+ Sbjct: 176 CIGIGGDPINGTNFLDCLEAFAADPDTKAIVMIGEIGGNAEENACEWIKANT----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 VGF+AG TAPPGR MGHAGA++SGGKG AE KI AMK +G+ Sbjct: 232 VGFIAGLTAPPGRRMGHAGAIVSGGKGTAEAKIEAMKASGV 272 >gi|139948224|ref|NP_446204.2| succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor [Rattus norvegicus] gi|223634703|sp|P13086|SUCA_RAT RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor gi|113819468|gb|AAH61537.2| Suclg1 protein [Rattus norvegicus] Length = 346 Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 181/295 (61%), Positives = 226/295 (76%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I +DKNTKV+ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF T Sbjct: 49 NIYIDKNTKVICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGKKHLG----LPVFNT 103 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS- 120 V EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DMVRVK +L + Sbjct: 104 VKEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHKLTRQG 163 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 164 KTRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 223 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++FL D ATE IV++GEIGG AEE AA+FLK+ + KP+V Sbjct: 224 IGIGGDPFNGTNFIDCLDVFLKDPATEGIVLIGEIGGHAEENAAEFLKEHNSGPKAKPVV 283 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G + + Sbjct: 284 SFIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVIVSMSPAQLGTCMYK 338 >gi|71281395|ref|YP_268947.1| succinyl-CoA synthase subunit alpha [Colwellia psychrerythraea 34H] gi|71147135|gb|AAZ27608.1| succinyl-CoA synthase, alpha subunit [Colwellia psychrerythraea 34H] Length = 290 Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIDY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A A+VIYVP DAI+E+I+A I LIV ITEGIP LDMV VKA+L ++ Sbjct: 56 TVRDAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTLDMVDVKAKLTQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP KIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGETKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAEYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L E G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGVALKEKTG 289 >gi|283782077|ref|YP_003372832.1| succinyl-CoA synthetase, alpha subunit [Pirellula staleyi DSM 6068] gi|283440530|gb|ADB18972.1| succinyl-CoA synthetase, alpha subunit [Pirellula staleyi DSM 6068] Length = 293 Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 165/293 (56%), Positives = 220/293 (75%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNT+V+ QG+TGKAG FHT+ Y T +VGG+ P K G +PVF Sbjct: 1 MSILINKNTRVICQGITGKAGAFHTKGCKEY-GTNMVGGVTPGKSGETVEG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T ANA++I+VP + DAI+E+++A I +I ITEG+PV+DMVRV + S Sbjct: 56 TVKEAVDKTGANATMIFVPAAYTADAILEALDAGIEVIAAITEGVPVIDMVRVYELVRAS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++TP CKIGIMPG I + G+VGI+SRSGTLTYEAV+QT+ GLGQST Sbjct: 116 KSVLIGPNCPGLITPGECKIGIMPGYIHKPGNVGIMSRSGTLTYEAVWQTTGLGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ GT +ID+ +L+ AD TE+I+M+GEIGG+AEEEAA ++K KP+ Sbjct: 176 VGLGGDPIVGTNYIDLFKLYEADPQTEAILMIGEIGGTAEEEAAAYVKAHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG+TAPPGR MGHAGA+ISGGKG A +K+ A+++AGI +A SPA +G ++ Sbjct: 232 AFIAGRTAPPGRRMGHAGAIISGGKGTAAEKVAALEDAGIEVADSPATMGEAV 284 >gi|149177236|ref|ZP_01855842.1| putative succinyl-CoA synthetase alpha subunit [Planctomyces maris DSM 8797] gi|148843950|gb|EDL58307.1| putative succinyl-CoA synthetase alpha subunit [Planctomyces maris DSM 8797] Length = 292 Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 168/293 (57%), Positives = 218/293 (74%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV + T+V+ QG+TGK+G FH++Q Y T +VGG+ P KG T G PVF Sbjct: 1 MSILVTEKTRVICQGITGKSGLFHSQQCREY-GTPLVGGVTPGKGGTEVDG----FPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T AN S+++VPP G+AI+E+ +A + LI+ ITEG+PV DMVRV L+ Sbjct: 56 TVEEAVEKTGANTSLVFVPPPFCGEAIMEAADAGMELIIAITEGVPVFDMVRVMEYLKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TP KIGIMPG I GSVG++S+SGTLTYEA +Q GLGQSTA Sbjct: 116 KSRLIGPNCPGVITPGIAKIGIMPGYIHTPGSVGLISKSGTLTYEAAWQLGNIGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FID+LELF D ATESI+++GEIGG+AE EAA+++K+ KP+ Sbjct: 176 VGIGGDPIIGTTFIDLLELFENDPATESIMLIGEIGGTAEIEAAEYIKEHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 GF+AGKTAPPG+ MGHAGA+ISGG G A++KI A++ AG+ +A SPA +G ++ Sbjct: 232 GFIAGKTAPPGKRMGHAGAIISGGSGTADEKIAALEAAGVVVAESPADMGTAM 284 >gi|226530690|ref|NP_001141184.1| hypothetical protein LOC100273271 [Zea mays] gi|194703138|gb|ACF85653.1| unknown [Zea mays] Length = 333 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 181/295 (61%), Positives = 226/295 (76%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I +DKNTKV+ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF T Sbjct: 36 NIYIDKNTKVICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGKKHLG----LPVFNT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS- 120 V EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DMVRVK +L + Sbjct: 91 VKEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHKLTRQG 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++FL D ATE IV++GEIGG AEE AA+FLK+ + KP+V Sbjct: 211 IGIGGDPFNGTNFIDCLDVFLKDPATEGIVLIGEIGGHAEENAAEFLKEHNSGPKAKPVV 270 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G + + Sbjct: 271 SFIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVIVSMSPAQLGTCMYK 325 >gi|268575842|ref|XP_002642901.1| Hypothetical protein CBG15175 [Caenorhabditis briggsae] gi|187027361|emb|CAP33573.1| hypothetical protein CBG_15175 [Caenorhabditis briggsae AF16] Length = 321 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 169/297 (56%), Positives = 222/297 (74%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +++++K+TKV+VQG TG+ GTFH++Q + Y T VVGG+ P K G +PVF T Sbjct: 28 NLMINKSTKVIVQGFTGRQGTFHSKQMLEY-NTNVVGGVSPNKAGQTHLG----LPVFGT 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+RT A+A+VIYVP +GA AI E+++AEI LIV ITEGIP DM+RVK RL +++ Sbjct: 83 VAEAKDRTGADATVIYVPAAGAARAIHEAMDAEIGLIVAITEGIPQQDMIRVKNRLLKQN 142 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 143 KSRLLGPNCPGIIASGDCKIGIMPGHIHKKGCIGIVSRSGTLTYEAVHQTTAVGLGQTRC 202 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D T+ I+++GEIGG AEE+AA+FLK KP+V Sbjct: 203 IGIGGDPFNGTNFIDCLEVFLEDNETKGIILIGEIGGQAEEQAAEFLKSRNSGPNAKPVV 262 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+I+GGKG A DKI A++ A + + SPA++G ++ + + Sbjct: 263 SFIAGVTAPPGRRMGHAGAIIAGGKGTAGDKIEALRNANVVVTDSPAKLGIAMQQAM 319 >gi|78223464|ref|YP_385211.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Geobacter metallireducens GS-15] gi|78194719|gb|ABB32486.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Geobacter metallireducens GS-15] Length = 291 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 163/297 (54%), Positives = 218/297 (73%), Gaps = 10/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QGL G G FH A Y TQ+VGG+ P KG T G PV+ Sbjct: 1 MSILINKDTKVITQGL-GATGLFHANGAREY-GTQMVGGVTPGKGGTVIDG----FPVYD 54 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A ASVIYVPP A D+I+E+++A + L++CITEGIPVLDMV+VK ++ Sbjct: 55 TVREAVAKTGATASVIYVPPPFAADSIMEAVDAGLDLVICITEGIPVLDMVKVKQYMQGK 114 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CKIGIMPG I + G VG++SRSGTLTYEAV+Q + GLGQST Sbjct: 115 KTRLVGPNCPGVITPGQCKIGIMPGYIHKPGKVGVVSRSGTLTYEAVWQLTNVGLGQSTC 174 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT +DVL +F D TE+++M+GEIGG++EEE A+F+K+ KP+ Sbjct: 175 VGIGGDPVNGTNHVDVLRMFEEDPDTEAVIMIGEIGGNSEEEGARFVKEH----MTKPVA 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAPPG+ MGHAGA+ISGGKG A +K+ ++E GI +A SPA + ++L+++ Sbjct: 231 AYIAGVTAPPGKRMGHAGAIISGGKGTATEKVAILEECGISVAQSPADMAKALLKIY 287 >gi|117925045|ref|YP_865662.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Magnetococcus sp. MC-1] gi|117608801|gb|ABK44256.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Magnetococcus sp. MC-1] Length = 290 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 183/298 (61%), Positives = 227/298 (76%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MSIFIDKNTKVICQGFTGANGTFHSEQAIAY-GTQMVGGVTPGKGGSTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A A+VIYVPP A DAI+E+ A++ L +CITEGIPVLDM++VK LE Sbjct: 56 TVAEAVAATGATATVIYVPPPFAADAIMEAAAADLDLAICITEGIPVLDMMKVKRYLEGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLVGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVAQTTAIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FID LE F D+ TE +VM+GEIGG+AEEEAA ++K KKP+V Sbjct: 176 VGIGGDPINGTNFIDCLERFNEDDETEVVVMIGEIGGTAEEEAAAWIKAH----MKKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAPPG+ MGHAGA+ISGGKG A +K A++ AG+ IA SP+ IG ++ + LG Sbjct: 232 GFIAGSTAPPGKRMGHAGAIISGGKGTAAEKFAALEAAGVFIAQSPSAIGETVKKALG 289 >gi|326794799|ref|YP_004312619.1| succinyl-CoA synthetase, subunit alpha [Marinomonas mediterranea MMB-1] gi|326545563|gb|ADZ90783.1| succinyl-CoA synthetase, alpha subunit [Marinomonas mediterranea MMB-1] Length = 290 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 211/298 (70%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+ A I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKEAVEETGAEASVIYVPAPFCKDSILEAANAGIKLIVCITEGIPTLDMLDCKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP KIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGQSKIGIMPGHIHMPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFQNDPQTEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A +K A+++AG+ S A IG L EL G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTAAEKFAALEDAGVKTVRSLADIGAGLKELTG 289 >gi|70729112|ref|YP_258848.1| succinyl-CoA synthetase subunit alpha [Pseudomonas fluorescens Pf-5] gi|68343411|gb|AAY91017.1| succinyl-CoA synthetase, alpha subunit [Pseudomonas fluorescens Pf-5] Length = 293 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 170/298 (57%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG+TG G+FHT+QAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGITGSQGSFHTQQAIEY-GTKMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP D+I+E+ I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKDAVAATGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVTLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|121999018|ref|YP_001003805.1| succinyl-CoA synthetase subunit alpha [Halorhodospira halophila SL1] gi|121590423|gb|ABM63003.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Halorhodospira halophila SL1] Length = 290 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 212/297 (71%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD++T+VLVQG TGK GTFH EQAI Y TQVVG G +++ P+F Sbjct: 1 MSILVDQSTRVLVQGFTGKQGTFHAEQAIAY-GTQVVG----GVTPGRGGGTHLDRPLFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A+ASVIYVP A DAI+E+ +A I +I CITEGIPVLDM+ VK L Sbjct: 56 TVREAVAATGADASVIYVPAPFAADAILEAADAGIRVIACITEGIPVLDMLHVKEALRGE 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TPD+CKIGIMPG I G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 DVALIGPNCPGVITPDACKIGIMPGHIHLPGRIGIVSRSGTLTYEAVKQTTDIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP++G F+D LE F AD T+ +VMVGEIGGSAEEEAA F++D KP+V Sbjct: 176 VGIGGDPIQGMSFVDCLEQFEADPHTDGVVMVGEIGGSAEEEAATFIRDH----MSKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAPPG+ MGHAGA+ISGGKG A+DK A++ AG+ SP IG + L+ Sbjct: 232 AYIAGVTAPPGKRMGHAGAIISGGKGTADDKFAALEAAGVATVRSPTEIGERIRRLV 288 >gi|313231207|emb|CBY08322.1| unnamed protein product [Oikopleura dioica] Length = 305 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 170/299 (56%), Positives = 213/299 (71%), Gaps = 7/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 +SI + K++ +QG+TGK GTFH A+ Y TQVVGG+ P KG T G +P+F Sbjct: 9 LSIRIRKSSSRKIQGMTGKQGTFHAMGAMDY-GTQVVGGVTPGKGGTTHLG----LPIFN 63 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EK 119 TV EA E T ANA+ IYVPP A +I E++EAEIPL VCITEGIP +DMV+VK +L + Sbjct: 64 TVGEAMEATGANATAIYVPPFAAAKSIDEAVEAEIPLAVCITEGIPEMDMVQVKTKLVRQ 123 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RLIGPNCPGI+ CKIGIMP I G +GI+S+SGTLTYEAV QTS+ GLGQ+ Sbjct: 124 GKTRLIGPNCPGIIRAGQCKIGIMPADIHTDGIIGIVSKSGTLTYEAVQQTSEVGLGQTY 183 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG-RKKP 238 +GIGGD GT FID LELFL D T I+M+GEIGG AEE A+++LK +G KP Sbjct: 184 CIGIGGDAFSGTNFIDALELFLQDPKTRGILMIGEIGGGAEEAASEYLKVHNPQGPNHKP 243 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + GF+AG TAPPGR MGHAGA+ISGGKG A KI AMK+AGI + SPA +G++++ + Sbjct: 244 VAGFIAGVTAPPGRRMGHAGAIISGGKGTAAAKIAAMKDAGIHVTNSPAEMGKTILRAI 302 >gi|204356|gb|AAA41233.1| succinyl-CoA synthetase alpha subunit (EC 6.2.1.4) [Rattus norvegicus] Length = 333 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 180/295 (61%), Positives = 226/295 (76%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I +DKNTKV+ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF T Sbjct: 36 NIYIDKNTKVICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGKKHLG----LPVFNT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS- 120 V EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DM+RVK +L + Sbjct: 91 VKEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMLRVKHKLTRQG 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++FL D ATE IV++GEIGG AEE AA+FLK+ + KP+V Sbjct: 211 IGIGGDPFNGTNFIDCLDVFLKDPATEGIVLIGEIGGHAEENAAEFLKEHNSGPKAKPVV 270 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G + + Sbjct: 271 SFIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVIVSMSPAQLGTCMYK 325 >gi|116327601|ref|YP_797321.1| succinyl-CoA synthetase, alpha subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331788|ref|YP_801506.1| succinyl-CoA synthetase, alpha subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120345|gb|ABJ78388.1| Succinyl-CoA synthetase, alpha subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125477|gb|ABJ76748.1| Succinyl-CoA synthetase, alpha subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 291 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 163/299 (54%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD+NTKV+VQG+TGK G+FH Q + Y T+VV G+ P KG + W VPVF Sbjct: 1 MAVLVDENTKVVVQGITGKEGSFHATQMLAY-GTKVVAGVTPGKGGSKWED---KVPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ ++ + NA+VI+VPP+ A DAIIE I AE+PL++CITEGIP DM++V + L S Sbjct: 57 TIKDSVKNEGVNAAVIFVPPAFAADAIIEGILAELPLVICITEGIPTHDMLKVYSVLRNS 116 Query: 121 SSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPG++TP + K+GIMPG I GSVGI+SRSGTLTYE+V Q +++GLGQST Sbjct: 117 KTRLVGPNCPGVITPRAKQKLGIMPGFIHSPGSVGIVSRSGTLTYESVAQITKQGLGQST 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV G + ++L D T+ IVM+GEIGG++EEEAA+++K+ KKP+ Sbjct: 177 CIGIGGDPVPGMNHTEAIQLLNEDPETKGIVMIGEIGGTSEEEAAEYIKNHV----KKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAPPG+ MGHAGA+ISGG G A K+ AM+EAGI + S A +G + + LG Sbjct: 233 VGFIAGQTAPPGKRMGHAGAIISGGLGTATSKMKAMQEAGIQVCQSIAEVGEKMKKALG 291 >gi|149036441|gb|EDL91059.1| succinate-CoA ligase, GDP-forming, alpha subunit, isoform CRA_b [Rattus norvegicus] Length = 360 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 174/295 (58%), Positives = 219/295 (74%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I +DKNTKV+ QG TGK GTFH++QA+ Y V ++ +PVF T Sbjct: 63 NIYIDKNTKVICQGFTGKQGTFHSQQALEYGTKLVG-----GTTPGKGGKKHLGLPVFNT 117 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS- 120 V EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DMVRVK +L + Sbjct: 118 VKEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHKLTRQG 177 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 178 KTRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 237 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++FL D ATE IV++GEIGG AEE AA+FLK+ + KP+V Sbjct: 238 IGIGGDPFNGTNFIDCLDVFLKDPATEGIVLIGEIGGHAEENAAEFLKEHNSGPKAKPVV 297 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G + + Sbjct: 298 SFIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVIVSMSPAQLGTCMYK 352 >gi|329898830|ref|ZP_08272492.1| Succinyl-CoA ligase [ADP-forming] alpha chain [gamma proteobacterium IMCC3088] gi|328920730|gb|EGG28199.1| Succinyl-CoA ligase [ADP-forming] alpha chain [gamma proteobacterium IMCC3088] Length = 290 Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 172/298 (57%), Positives = 214/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSILINSETKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A E T A ASVIYVP + D+I+E+ A I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVADAVEATGAEASVIYVPAAFCKDSILEAAFAGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D ATE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPATEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG +L E G Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEDAGVTTVRSLADIGVALKERTG 289 >gi|119181970|ref|XP_001242148.1| hypothetical protein CIMG_06044 [Coccidioides immitis RS] Length = 331 Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 174/293 (59%), Positives = 220/293 (75%), Gaps = 8/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ TKVL QG TGK GTFH +QAI Y T VVGG +PKK +++ PVF T Sbjct: 36 NLRINSETKVLYQGFTGKQGTFHAQQAIDYG-TNVVGGTNPKKAGEM----HLDRPVFAT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T ANAS I+VPP A +I E+IEAE+PL+VCITEGIP DMVR+ L+ +S Sbjct: 91 VRDAMKETGANASAIFVPPPVAARSIEEAIEAEMPLVVCITEGIPQHDMVRITDILKTQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA+FL+ E K KP V Sbjct: 211 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAEFLRSENK--ANKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 GF+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALESAGVIVERSPASLGKTL 321 >gi|190575605|ref|YP_001973450.1| succinyl-CoA synthetase subunit alpha [Stenotrophomonas maltophilia K279a] gi|190013527|emb|CAQ47162.1| putative succinyl-CoA synthetase alpha chain [Stenotrophomonas maltophilia K279a] Length = 291 Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 175/299 (58%), Positives = 221/299 (73%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q I Y TQVVGG+ P KG T ++++PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMIEY-GTQVVGGVTPGKGGTT----HIDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T ANASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVQSTGANASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HPDTVLIGPNCPGVITPGECKIGIMPGHIHQPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K+ KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKNHV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ +L+ Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVVTVRSPGDLGAAIAKLV 290 >gi|240112778|ref|ZP_04727268.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae MS11] gi|254493638|ref|ZP_05106809.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae 1291] gi|268598846|ref|ZP_06133013.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae MS11] gi|226512678|gb|EEH62023.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae 1291] gi|268582977|gb|EEZ47653.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae MS11] Length = 296 Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 163/299 (54%), Positives = 222/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG ++++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE + Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTNLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++ G TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYITGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVL 290 >gi|225848462|ref|YP_002728625.1| succinate-CoA ligase, subunit alpha subfamily [Sulfurihydrogenibium azorense Az-Fu1] gi|225643231|gb|ACN98281.1| succinate-CoA ligase, alpha subunit subfamily [Sulfurihydrogenibium azorense Az-Fu1] Length = 293 Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 169/300 (56%), Positives = 222/300 (74%), Gaps = 13/300 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN-VPVF 59 MS+LV+KNTKV+VQG+TG+ G+FH Q Y TQVV G+ P K G NV +PVF Sbjct: 1 MSVLVNKNTKVVVQGITGREGSFHAIQCKAY-GTQVVAGVTPGK-----KGENVEGIPVF 54 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EA E T A+ S+I+VPP A DAI+E+++A I ++CITEGIPV DM+ VK ++K Sbjct: 55 DTVKEAVEETGADCSLIFVPPPFAADAILEAVDAGIKTVICITEGIPVNDMLPVKQYIKK 114 Query: 120 S--SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + LIGPNCPG++TP+ KIGIMPG IF+KG+VGI+SRSGTLTYEA +Q + G+GQ Sbjct: 115 YYPDTVLIGPNCPGVITPEEAKIGIMPGHIFKKGNVGIVSRSGTLTYEAAYQLTTRGIGQ 174 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 STAVGIGGDP+ GT F DVL+ F D TE+IVM+GEIGG+AEEEAA+F+K KK Sbjct: 175 STAVGIGGDPIPGTVFADVLKWFQDDPETEAIVMIGEIGGTAEEEAAEFIKSYV----KK 230 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+V ++AG TAPPG+ MGHAGA+I+GGKG A +K A++ AG+ +P+ IG ++ ++L Sbjct: 231 PVVAYIAGVTAPPGKRMGHAGAIIAGGKGTAAEKYKALESAGVVTVKNPSIIGETVEKVL 290 >gi|269837812|ref|YP_003320040.1| succinyl-CoA synthetase, alpha subunit [Sphaerobacter thermophilus DSM 20745] gi|269787075|gb|ACZ39218.1| succinyl-CoA synthetase, alpha subunit [Sphaerobacter thermophilus DSM 20745] Length = 289 Score = 322 bits (825), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 168/298 (56%), Positives = 213/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD+ T++LVQG+TG+ G+FHT Q I Y T VV G+ P G VPVF Sbjct: 1 MSILVDRQTRLLVQGITGREGSFHTAQMIEYG-TNVVAGVTPGGAGKTVHG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T AN S+IYVP A DAI E+++A I L+VCITE IP LDMV+V +++S Sbjct: 56 TVEEAVRETGANTSIIYVPARFAPDAIYEAVDAGIALVVCITENIPTLDMVKVYHHVKQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TP K+GIMPG I G VG++SRSGTLTYE V +Q GLGQSTA Sbjct: 116 GSRLIGPNCPGLITPGQAKVGIMPGYIHTPGPVGVVSRSGTLTYEVVHALTQAGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F+DVL +F AD AT +IVM+GEIGG+ EE+AA+++K KP+V Sbjct: 176 VGIGGDPIIGTSFVDVLGMFEADPATRAIVMIGEIGGTDEEKAAEYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPG+ MGHAGA+ISGG+G A +KI A+ AG+ +A S ++ + E LG Sbjct: 232 GFIAGRTAPPGKRMGHAGAIISGGQGTAAEKIAALNAAGVPVAESAQQVAELVREALG 289 >gi|88703458|ref|ZP_01101174.1| Succinyl-CoA synthetase alpha chain [Congregibacter litoralis KT71] gi|88702172|gb|EAQ99275.1| Succinyl-CoA synthetase alpha chain [Congregibacter litoralis KT71] Length = 290 Score = 322 bits (825), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 170/298 (57%), Positives = 213/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSILINKDTKVICQGFTGSQGTFHSEQAIEY-GTKMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA T A ASVIYVP D+I+E+ I L+VCITEGIP LDM+ K + ++ Sbjct: 56 TVSEAVAATGAEASVIYVPAPFCKDSILEAANGGIKLVVCITEGIPTLDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QTS G GQST Sbjct: 116 GVRLVGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTSDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L +F AD ATE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILAMFEADPATEAIVMIGEIGGTAEEEAAAYIKANV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG L E+ G Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLADIGSGLSEITG 289 >gi|294887515|ref|XP_002772148.1| Succinyl-CoA ligase, putative [Perkinsus marinus ATCC 50983] gi|239876086|gb|EER03964.1| Succinyl-CoA ligase, putative [Perkinsus marinus ATCC 50983] Length = 332 Score = 322 bits (824), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 180/296 (60%), Positives = 225/296 (76%), Gaps = 5/296 (1%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QGLTGK GTFHT QAI Y T++VGG++PKK T G+ N+P+F V Sbjct: 30 VWVDKNTKVICQGLTGKQGTFHTAQAIEY-GTKMVGGVNPKKAGTTHNVGDKNLPIFANV 88 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS-- 120 EA++ T A+ASV+YVPP A A +E+IEAEIPL+VCITEGIP DMV+VKA L+ + Sbjct: 89 MEARQATGADASVVYVPPFAAASACLEAIEAEIPLLVCITEGIPQHDMVKVKAALKMAGG 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I +KG +G++SRSGTLTYEAV QT++ GLGQST Sbjct: 149 KTRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGVVSRSGTLTYEAVNQTTEVGLGQSTV 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID LE F+ D TE I+++GEIGG+AEEEAA++LK+ K KP+V Sbjct: 209 VGIGGDPFNGTNFIDCLERFVQDPQTEGIILIGEIGGAAEEEAAEWLKENNK--DNKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 F+AG TAPPGR MGHAGA+ISGGKG A KI A++ G + SPA +G ++E+ Sbjct: 267 SFIAGVTAPPGRRMGHAGAIISGGKGTAATKIAALEACGANVVRSPADLGIKMLEM 322 >gi|134093622|ref|YP_001098697.1| succinyl-CoA synthetase subunit alpha [Herminiimonas arsenicoxydans] gi|133737525|emb|CAL60568.1| Succinyl-CoA ligase [ADP-forming] subunit alpha (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) [Herminiimonas arsenicoxydans] Length = 291 Score = 322 bits (824), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 164/299 (54%), Positives = 215/299 (71%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT I Y + V G++PKK + G VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCIEYANGKNCFVAGVNPKKPGESFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +VAEAK T A SVIYVPP A AI E+++A I L++CITEGIPV DM+R KAR+E Sbjct: 57 YASVAEAKAETGATVSVIYVPPPFAAAAIDEAVDAGIDLVICITEGIPVRDMIRTKARME 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + L+GPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEA Q ++ GLGQS Sbjct: 117 GKKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAAGQLAEFGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV G + ID+L +F D T++++MVGEIGG AEE A+++KD KKP Sbjct: 177 TVVGIGGDPVSGLKHIDILRMFNDDPDTDAVIMVGEIGGDAEETCARWIKDNM----KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG TAP G+ MGHAGA+ISGGKG A++K+ M+ GI + +PA +GR L +L Sbjct: 233 VVGFIAGVTAPEGKRMGHAGAIISGGKGTAQEKLAVMEACGIKVTRNPAEMGRLLKSVL 291 >gi|30248082|ref|NP_840152.1| succinyl-CoA synthetase subunit alpha [Nitrosomonas europaea ATCC 19718] gi|30179967|emb|CAD83962.1| ATP-citrate lyase/succinyl-CoA ligases:DUF184 [Nitrosomonas europaea ATCC 19718] Length = 291 Score = 322 bits (824), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 161/295 (54%), Positives = 217/295 (73%), Gaps = 10/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQA--ILYCQTQVVGGIHPKKGSTYWTGGNVNVPV 58 M+IL+D++T+V+ QG+TGK G FHT Q Y + V G++PKK ++PV Sbjct: 1 MAILIDRHTRVMTQGITGKTGQFHTRQCREYAYGRDCFVAGVNPKKAGEELE----SIPV 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV EAK++T A SVIYVPP+ A AI E++EA + L+VCITEGIPV DM+R +AR+ Sbjct: 57 FATVEEAKQKTGATVSVIYVPPAYASAAIDEAVEAGLDLVVCITEGIPVRDMLRTRARMR 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPGI+TP KIGIMPG+I ++G +G++SRSGTLTYEAV Q S+ GLGQS Sbjct: 117 GKKTLLIGPNCPGIITPGELKIGIMPGAIHQQGRIGVVSRSGTLTYEAVAQLSELGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G + IDVL+LF D T++++MVGEIGG+ EEE A+++K+ KKP Sbjct: 177 TCIGIGGDPINGLKHIDVLKLFNEDSETDAVLMVGEIGGTDEEECARWVKEHM----KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 +VGF+AG TAPPG+ MGHAGA+I+GGKG A++KI M+ GI + +PA +G+ L Sbjct: 233 VVGFIAGVTAPPGKRMGHAGAIIAGGKGTAQEKIEVMEACGIRVTRNPAEMGKLL 287 >gi|320034579|gb|EFW16523.1| succinyl-CoA synthetase alpha subunit [Coccidioides posadasii str. Silveira] Length = 331 Score = 322 bits (824), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 173/293 (59%), Positives = 220/293 (75%), Gaps = 8/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ T+VL QG TGK GTFH +QAI Y T VVGG +PKK +++ PVF T Sbjct: 36 NLRINSETRVLYQGFTGKQGTFHAQQAIDYG-TNVVGGTNPKKAGEM----HLDRPVFAT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T ANAS I+VPP A +I E+IEAE+PL+VCITEGIP DMVR+ L+ +S Sbjct: 91 VRDAMKETGANASAIFVPPPVAARSIEEAIEAEMPLVVCITEGIPQHDMVRITDILKTQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA+FL+ E K KP V Sbjct: 211 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAEFLRSENK--ANKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 GF+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALESAGVIVERSPASLGKTL 321 >gi|156367357|ref|XP_001627384.1| predicted protein [Nematostella vectensis] gi|156214292|gb|EDO35284.1| predicted protein [Nematostella vectensis] Length = 331 Score = 322 bits (824), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 176/297 (59%), Positives = 219/297 (73%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+ QG TGK GTFH++Q+I Y T +VGG+ P KG G +PVF T Sbjct: 29 NLNINKDTKVICQGFTGKQGTFHSQQSIEY-GTNMVGGVSPGKGGKTHLG----LPVFDT 83 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAK T A+A+VIYVPP A DAI E+IEAEI LIVCITEGIP DMV+VK RL E+ Sbjct: 84 VQEAKNETGADATVIYVPPPYAADAIHEAIEAEIGLIVCITEGIPQQDMVKVKRRLTEQG 143 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P CKIGIMPG I G +GI+SRSGTLTYEAV QTS LGQS Sbjct: 144 KSRLIGPNCPGIIKPGECKIGIMPGHIHHPGVIGIVSRSGTLTYEAVHQTSHVNLGQSLC 203 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE+FL D T+ IV++GEIGG AEE+AA++L + KP+V Sbjct: 204 VGIGGDPFNGTNFVDCLEVFLNDPGTKGIVLIGEIGGGAEEKAAEYLAENNTGDNAKPVV 263 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+I+GG+GGAE KI A+K+AG+ + SPA++G + ++ Sbjct: 264 SFIAGVTAPPGRRMGHAGAIIAGGRGGAEHKIQALKDAGVNVTMSPAQMGSMMRKVF 320 >gi|262369430|ref|ZP_06062758.1| succinyl-CoA synthetase subunit alpha [Acinetobacter johnsonii SH046] gi|262315498|gb|EEY96537.1| succinyl-CoA synthetase subunit alpha [Acinetobacter johnsonii SH046] Length = 296 Score = 322 bits (824), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 165/299 (55%), Positives = 223/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T ++++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSAQALDY-GTKVVGGVTPGKGGTT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A T A+A+VIYVP D+IIE++++ + LIV ITEG+P LDM++ K L+ + Sbjct: 56 TMKDAVAGTGADATVIYVPAPFVLDSIIEAVDSGVGLIVVITEGVPTLDMLKAKRYLQTN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RLIGPNCPGI+TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLIGPNCPGIITPGECKIGIMPGHIHQPGKIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D TE+I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDCLKLFQEDPQTEAIIMIGEIGGTAEEEAAEYIQSHV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AG+ SPA +G ++ +LL Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGMAYTRSPAELGSTMFQLL 290 >gi|21243961|ref|NP_643543.1| succinyl-CoA synthetase subunit alpha [Xanthomonas axonopodis pv. citri str. 306] gi|294625818|ref|ZP_06704435.1| succinyl-CoA synthetase alpha subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666978|ref|ZP_06732207.1| succinyl-CoA synthetase alpha subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|21109573|gb|AAM38079.1| succinyl-CoA synthetase alpha subunit [Xanthomonas axonopodis pv. citri str. 306] gi|292599893|gb|EFF44013.1| succinyl-CoA synthetase alpha subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603267|gb|EFF46689.1| succinyl-CoA synthetase alpha subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 291 Score = 322 bits (824), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 175/299 (58%), Positives = 220/299 (73%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG T ++N+PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGTT----HINLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A E T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVEATGADASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HPDTVLIGPNCPGVITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K+ KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKNHV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L+ Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAALV 290 >gi|296809193|ref|XP_002844935.1| succinyl-CoA ligase subunit alpha [Arthroderma otae CBS 113480] gi|238844418|gb|EEQ34080.1| succinyl-CoA ligase subunit alpha [Arthroderma otae CBS 113480] Length = 330 Score = 322 bits (824), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 174/294 (59%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T VVGG +PKK G PVF + Sbjct: 35 NLRINADTKVIFQGFTGKQGTFHAQQAIDYG-TNVVGGTNPKKAGETHLGK----PVFAS 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + T A AS I+VPPS A +I ESI AE+PL+VCITEGIP DMVR+ L+ +S Sbjct: 90 VAEAVKETGATASAIFVPPSVAAKSIEESIAAEVPLVVCITEGIPQHDMVRITDMLKTQS 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 150 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA FLK E + KP V Sbjct: 210 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAAFLKSENR--ANKPAV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AG +APPGR MGHAGA++SGGKGGA+ KI A+++AG+ + SPA +G++L+ Sbjct: 268 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALQDAGVIVERSPASLGKTLL 321 >gi|330811083|ref|YP_004355545.1| succinate--CoA ligase (GDP-forming) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379191|gb|AEA70541.1| Succinate--CoA ligase (GDP-forming) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 294 Score = 321 bits (823), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 169/298 (56%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG+TG G+FHT+QAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGITGSQGSFHTQQAIEY-GTKMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKDAVAATGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GITLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|303318851|ref|XP_003069425.1| succinyl-CoA synthetase alpha subunit, putative [Coccidioides posadasii C735 delta SOWgp] gi|240109111|gb|EER27280.1| succinyl-CoA synthetase alpha subunit, putative [Coccidioides posadasii C735 delta SOWgp] Length = 331 Score = 321 bits (823), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 173/293 (59%), Positives = 220/293 (75%), Gaps = 8/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ T+VL QG TGK GTFH +QAI Y T VVGG +PKK +++ PVF T Sbjct: 36 NLRINSETRVLYQGFTGKQGTFHAQQAIDYG-TNVVGGTNPKKAGEM----HLDRPVFAT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T ANAS I+VPP A +I E+IEAE+PL+VCITEGIP DMVR+ L+ +S Sbjct: 91 VRDAMKETGANASAIFVPPPVAARSIEEAIEAEMPLVVCITEGIPQHDMVRITDILKTQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA+FL+ E K KP V Sbjct: 211 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAEFLRSENK--ANKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 GF+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALESAGVIVERSPAALGKTL 321 >gi|78223275|ref|YP_385022.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Geobacter metallireducens GS-15] gi|78194530|gb|ABB32297.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Geobacter metallireducens GS-15] Length = 296 Score = 321 bits (823), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 163/297 (54%), Positives = 218/297 (73%), Gaps = 10/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QGL G G FH + A Y TQ+VGG+ P KG T G PV+ Sbjct: 1 MSILINKDTKVITQGL-GATGLFHAQGAREY-GTQMVGGVTPGKGGTVVDG----FPVYD 54 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A +T A ASVIYVPP A DAI+E+++A I L +CITEGIPVLDMV+VK ++ Sbjct: 55 TVRDAVNQTGATASVIYVPPPFAADAIMEAVDAGIELAICITEGIPVLDMVKVKQYMQGK 114 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CKIGIMPG I + G VG++SRSGTLTYEAV+Q + GLGQST Sbjct: 115 KTRLVGPNCPGVITPGECKIGIMPGYIHKPGKVGVVSRSGTLTYEAVWQLTNVGLGQSTC 174 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT +DVL +F D TE+++M+GEIGG++EEE A+F+K+ KP+ Sbjct: 175 VGIGGDPVNGTNHVDVLRMFEEDPDTEAVIMIGEIGGNSEEEGARFVKEY----MTKPVA 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAPPG+ MGHAGA+I+GGKG A +K+ ++E GI +A SPA + ++L+++ Sbjct: 231 AYIAGMTAPPGKRMGHAGAIIAGGKGTATEKVAILEECGISVAQSPADMAKALLKVY 287 >gi|94677017|ref|YP_588571.1| succinyl-CoA synthetase, alpha subunit [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94220167|gb|ABF14326.1| succinyl-CoA synthetase, alpha subunit [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 294 Score = 321 bits (822), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 163/297 (54%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QGLTG+ G+FH+ QA+ Y T++VGG+ P KG TY G +PVF Sbjct: 1 MSILINKHTKVICQGLTGRQGSFHSAQALAY-GTKIVGGVTPGKGGTYHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A SVIYVP DAI+E+I+A I LI+CITEG+P+LDM+ +KA+L++ Sbjct: 56 TVREACYQTCATTSVIYVPAPFCKDAILEAIDAGIQLIICITEGLPILDMLVIKAKLKQR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + R+IGPNCPGI+TP CKIGIMPG I + G +GI+SRSG+LTYEAV +T+ LGQS+ Sbjct: 116 NVRMIGPNCPGIITPGECKIGIMPGHIHQPGRIGIVSRSGSLTYEAVKETNDTNLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGD + G+ FID+++LF D TE+I+++GEIGG AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDIILGSNFIDIIKLFELDPQTEAIILIGEIGGDAEEEAAIYIKNHI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K+ ++ AGI S A IG+ L +L Sbjct: 232 GYIAGFTAPQGKRMGHAGAIITGGKGSAKEKLLLLEAAGINTVRSLADIGQVLKRIL 288 >gi|262371938|ref|ZP_06065217.1| succinyl-CoA synthetase subunit alpha [Acinetobacter junii SH205] gi|262311963|gb|EEY93048.1| succinyl-CoA synthetase subunit alpha [Acinetobacter junii SH205] Length = 296 Score = 321 bits (822), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 162/299 (54%), Positives = 224/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T ++++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSAQALDYG-TKVVGGVTPGKGGTT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A T A+ASVIYVP D+I+E++++ + LIV ITEG+P +DM++ K LE + Sbjct: 56 TMKDAVRETGADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTIDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA+F++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQDDPDTDAIIMIGEIGGTAEEEAAEFIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGMAYTRSPAELGSTMMQVL 290 >gi|225850686|ref|YP_002730920.1| succinate-CoA ligase, alpha subunit subfamily [Persephonella marina EX-H1] gi|225646629|gb|ACO04815.1| succinate-CoA ligase, alpha subunit subfamily [Persephonella marina EX-H1] Length = 292 Score = 321 bits (822), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 167/300 (55%), Positives = 220/300 (73%), Gaps = 11/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKV+VQG+TG+ G+FH Q Y TQVVGG+ P KG G +PVF Sbjct: 1 MSVLVDKNTKVIVQGITGREGSFHATQCKAY-GTQVVGGVTPGKGGQEVEG----IPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA + T A+ S+I+VPP A DAI+E+++A I ++CITEGIPV DM+ VK ++ Sbjct: 56 SVKEAVDNTGADCSLIFVPPPFAADAILEAVDAGIKTVICITEGIPVNDMIPVKNYIKTY 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP+ KIGIMPG IF++G+VGI+SRSGTLTYEA FQ S +G+GQS Sbjct: 116 YPDTVLIGPNCPGVITPEEAKIGIMPGHIFKRGNVGIVSRSGTLTYEAAFQLSNKGIGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDPV GT F DVL+ F D TE+IVM+GEIGG+AEEEAA+F+K+ KP Sbjct: 176 TVIGIGGDPVPGTVFSDVLKWFQDDPETEAIVMIGEIGGTAEEEAAEFIKEYV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V ++AG TAPPG+ MGHAGA+I+GGKG A++K A++ AG + + IG + E+LG Sbjct: 232 VVAYIAGVTAPPGKRMGHAGAIIAGGKGTADEKYRALEAAGATTVKNISTIGDVVAEVLG 291 >gi|51244138|ref|YP_064022.1| succinyl-CoA synthetase, alpha chain [Desulfotalea psychrophila LSv54] gi|50875175|emb|CAG35015.1| probable succinyl-CoA synthetase, alpha chain [Desulfotalea psychrophila LSv54] Length = 294 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 168/298 (56%), Positives = 216/298 (72%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI V+ T++LVQG+TG+ G FHT Q I Y TQVV G+ P KG ++P++ Sbjct: 1 MSIFVNSKTRLLVQGITGQEGQFHTRQCINY-GTQVVAGVTPGKGGQMMD----SIPIYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA++ +AANAS+I VPP A DAI+E+ +A I LI+CITEGIP++DM+RVK L + Sbjct: 56 TVREARQISAANASMIMVPPPFAADAILEAADAGIELIICITEGIPIIDMLRVKNYLATT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS-VGILSRSGTLTYEAVFQTSQEGLGQST 179 +SRLIGPNCPGI+TP CKIGIMP I G +G++SRSGTLTYE V Q + GLGQ+T Sbjct: 116 TSRLIGPNCPGIITPGECKIGIMPAKIHTPGGPMGVVSRSGTLTYEVVHQLTGVGLGQTT 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT FID L+ F AD TE++VMVGEIGG AEEEAA ++K KKP+ Sbjct: 176 CVGIGGDPINGTGFIDCLKAFNADAETEAVVMVGEIGGQAEEEAAAWVKAH----MKKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +GF+AG TAPPGR MGHAGA++SGG+G A KI AM++AGI I+ + +G ++L Sbjct: 232 IGFIAGLTAPPGRRMGHAGAIVSGGQGAAATKIMAMRDAGIHISENLGTLGMLARQVL 289 >gi|302036211|ref|YP_003796533.1| succinyl-CoA synthetase, NAD(P)-binding subunit alpha [Candidatus Nitrospira defluvii] gi|300604275|emb|CBK40607.1| Succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Candidatus Nitrospira defluvii] Length = 290 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 165/298 (55%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNT+V+VQG+TGK G+FH Q Y T++V G+ P K G +PVF Sbjct: 1 MSILVNKNTRVVVQGITGKEGSFHATQCKAY-GTKMVAGVTPGKAGQEVEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A ++T + S+I+VPP DAI+E+ +A + LI+CITEGIPV DMV+VK L Sbjct: 56 TVADAVKKTDCDTSLIFVPPPFCADAILEAADAGVKLIICITEGIPVNDMVKVKRALHGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++T D KIGIMPG I ++G VG++SRSGTLTYEAV Q S GLG++T Sbjct: 116 DVRLIGPNCPGVITVDEAKIGIMPGFIHKRGVVGVVSRSGTLTYEAVHQLSTLGLGETTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+DVL LF D T+++VM+GEIGG AEE+AA+++K KKP++ Sbjct: 176 VGIGGDPVNGTGFVDVLPLFEQDSETQAVVMIGEIGGDAEEKAAEYIKKHV----KKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA+ISGGKG A +K+ A++ AG+ + +PA IG ++ LG Sbjct: 232 SFIAGITAPPGRRMGHAGAIISGGKGTATEKMKALEAAGVRVVKNPAEIGHAVKAALG 289 >gi|50085912|ref|YP_047422.1| succinyl-CoA synthetase subunit alpha [Acinetobacter sp. ADP1] gi|49531888|emb|CAG69600.1| succinyl-CoA synthetase alpha chain [Acinetobacter sp. ADP1] Length = 296 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 162/299 (54%), Positives = 223/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T ++++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSAQALDYG-TKVVGGVTPGKGGTT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A T A+ASVIYVP D+I+E++++ + LIV ITEG+P LDM++ K LE + Sbjct: 56 TMKDAVRETGADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTLDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQDDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A + AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFERAGMAYTRSPAELGSTMLQVL 290 >gi|262340829|ref|YP_003283684.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272166|gb|ACY40074.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 291 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 173/298 (58%), Positives = 213/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKN KVLVQGLTGK G FHTEQ I Y T +VGG+ P KG + G VPVF Sbjct: 1 MSILIDKNIKVLVQGLTGKEGLFHTEQMINY-GTSIVGGVTPGKGGKTYLG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T N SVI+VP A DAI+ESI A + +IVCITEGIPV DM+ +K L++ Sbjct: 56 TVEEAVKNTGGNVSVIFVPSPFASDAILESIFANVEVIVCITEGIPVSDMIIIKHLLKEK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S LIGPNCPGI++P+ K+GIMP S+FR KG +GI+SRSGTLTYEA Q + G G ST Sbjct: 116 KSCLIGPNCPGIISPEESKVGIMPNSVFRKKGKIGIISRSGTLTYEAADQIVKLGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGD V G +++ELFL D+ TE IVM+GEIGG E EAA+++K K +KPI Sbjct: 176 AVGIGGDSVIGMSIKEIMELFLEDQETECIVMIGEIGGKLEIEAAEWIK---KLNNQKPI 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + F+AG+TAP GRTMGHAGA+I A+ K+N MKE+GI I SPA IG ++ E+L Sbjct: 233 ISFIAGQTAPKGRTMGHAGAIIEKKIETAQVKMNIMKESGIHIVKSPANIGMTVYEVL 290 >gi|94498998|ref|ZP_01305536.1| Succinyl-CoA synthetase, alpha subunit [Oceanobacter sp. RED65] gi|94428630|gb|EAT13602.1| Succinyl-CoA synthetase, alpha subunit [Oceanobacter sp. RED65] Length = 290 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNTKV+ QG TG GTFH+EQAI Y T +VGG+ P KG T G +PVF Sbjct: 1 MSILLEKNTKVICQGFTGSQGTFHSEQAIEY-GTNMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A ASVIYVP D+I+E+ A I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKEAVEQTGAEASVIYVPAPFCKDSILEAANAGIQLIVCITEGIPTLDMMYCKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP KIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVVLIGPNCPGVITPGQSKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDFGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+ F D TE+IVM+GEIGG+AEEEAA+++K+ KP+V Sbjct: 176 VGIGGDPIPGSSFIDILKRFEEDPQTEAIVMIGEIGGTAEEEAAEYIKENV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+I+GGKG A++K A++ AG+ S A IG++L E G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIIAGGKGTADEKFAALEAAGVQTVKSLADIGKALKEKTG 289 >gi|24213801|ref|NP_711282.1| succinyl-CoA synthetase subunit alpha [Leptospira interrogans serovar Lai str. 56601] gi|45658412|ref|YP_002498.1| succinyl-CoA synthetase subunit alpha [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24194631|gb|AAN48300.1|AE011292_13 succinyl-CoA synthetase alpha subunit [Leptospira interrogans serovar Lai str. 56601] gi|45601655|gb|AAS71135.1| succinyl-CoA synthetase alpha subunit [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 291 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 162/299 (54%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD+NTKV+VQG+TGK G+FH Q + Y T+VV G+ P KG + W VPVF Sbjct: 1 MAVLVDENTKVVVQGITGKEGSFHATQMLAY-GTKVVAGVTPGKGGSKWED---KVPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ ++ + NA+VI+VPP+ A DAIIE I AE+PL++CITEGIP DM++V + L S Sbjct: 57 TIKDSIKNEGVNAAVIFVPPAFAADAIIEGILAELPLVICITEGIPTHDMLKVYSVLRNS 116 Query: 121 SSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++L+GPNCPG++TP + K+GIMPG I GSVGI+SRSGTLTYE+V Q +++GLGQST Sbjct: 117 KTKLVGPNCPGVITPRAKQKLGIMPGFIHSPGSVGIVSRSGTLTYESVAQITKQGLGQST 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV G + ++L D T+ IVM+GEIGG++EEEAA+++K+ KKP+ Sbjct: 177 CIGIGGDPVPGMNHTEAIKLLNEDPETKGIVMIGEIGGTSEEEAAEYIKNHV----KKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAPPG+ MGHAGA+ISGG G A K+ AM+EAGI + S A +G + + LG Sbjct: 233 VGFIAGQTAPPGKRMGHAGAIISGGLGTATSKMKAMQEAGIQVCQSIAEVGEKMKKALG 291 >gi|225557817|gb|EEH06102.1| succinyl-CoA ligase alpha-chain [Ajellomyces capsulatus G186AR] Length = 331 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 172/294 (58%), Positives = 222/294 (75%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T VVGG +PKK G PVF T Sbjct: 36 NLRINSDTKVIYQGFTGKQGTFHAQQAIDY-GTNVVGGTNPKKAGQTHLGK----PVFAT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A +I E+IE+E+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 91 VRDAVKETGATASAIFVPPPLAAKSIEEAIESEVPLVVCITEGIPQHDMVRITDILKTQN 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLK E K + KP V Sbjct: 211 VGIGGDPFSGTNFIDCLKVFLNDEETDGIIMIGEIGGSAEEDAAEFLKQENK--KNKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L+ Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALESAGVIVERSPAALGKTLL 322 >gi|254429340|ref|ZP_05043047.1| succinyl-CoA synthetase, alpha subunit subfamily [Alcanivorax sp. DG881] gi|196195509|gb|EDX90468.1| succinyl-CoA synthetase, alpha subunit subfamily [Alcanivorax sp. DG881] Length = 291 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 169/299 (56%), Positives = 214/299 (71%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GT H+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGSQGTLHSEQAIEY-GTQMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A ASVIYVP D+I+E+ +A I LIVCITEG+P LDM+ VK + + Sbjct: 56 TVAEAVAETGATASVIYVPAPFCKDSILEAADAGIELIVCITEGVPALDMLFVKEYISRM 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT++ G GQS+ Sbjct: 116 DGVRLIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVNQTTKLGFGQSS 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G FID LELF D TE+IVMVGEIGG+AE+EAA ++K+ KP+ Sbjct: 176 CIGIGGDPIPGMTFIDALELFQNDPQTEAIVMVGEIGGTAEDEAAAYIKENV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG TAP G+ MGHAGA+I+GGKG A++K ++ AG+ +PA IG+++ E G Sbjct: 232 VSYIAGVTAPAGKRMGHAGAIIAGGKGTADEKFAVLEAAGVKTVRNPAEIGKAVKEATG 290 >gi|296122652|ref|YP_003630430.1| succinyl-CoA synthetase, subunit alpha [Planctomyces limnophilus DSM 3776] gi|296014992|gb|ADG68231.1| succinyl-CoA synthetase, alpha subunit [Planctomyces limnophilus DSM 3776] Length = 300 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 168/300 (56%), Positives = 217/300 (72%), Gaps = 15/300 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ------VVGGIHPKKGSTYWTGGNV 54 MSILVDKNTK++ QG+TGKAG FH++Q Y + VGG+ P KG T Sbjct: 1 MSILVDKNTKIICQGITGKAGLFHSQQCRAYAKEHRPGENVFVGGVTPGKGGTTVD---- 56 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + PVF TVAEA +T AN S+I+VPP A D+I+E+ +A I LIVCITEGIPVLDM RVK Sbjct: 57 DFPVFNTVAEACAKTGANCSLIFVPPPFAADSILEAADAGIELIVCITEGIPVLDMARVK 116 Query: 115 ARLE-KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 L SRLIGPNCPG++TP KIGIMPG I + G+VG++S+SGTLTYEA +Q Sbjct: 117 KALAFYPKSRLIGPNCPGVITPGVAKIGIMPGYIHKPGTVGLISKSGTLTYEATWQLGNL 176 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 GLGQSTAVGIGGDP+ GT +I++LE+F D TE+I+M+GEIGG+AE +AA+++K Sbjct: 177 GLGQSTAVGIGGDPIIGTPYIELLEMFQNDPGTEAIMMIGEIGGNAEIKAAEYIKAHV-- 234 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+ F+AG+TAPPG+ MGHAGA+ISGG G AE+K+ A++ AG+ +A SP +G +L Sbjct: 235 --TKPVAAFIAGQTAPPGKRMGHAGAIISGGAGTAEEKMAALEAAGVVVARSPGEMGVAL 292 >gi|152980019|ref|YP_001352081.1| succinyl-CoA synthetase subunit alpha [Janthinobacterium sp. Marseille] gi|151280096|gb|ABR88506.1| succinyl-CoA synthetase alpha chain [Janthinobacterium sp. Marseille] Length = 291 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 163/299 (54%), Positives = 215/299 (71%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT+ I Y + V G++PKK + G VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTKMCIEYANGKNCFVAGVNPKKAGESFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +VAEAK T A SVIYVPP A AI E+++A + L++CITEGIPV DM+R K R+E Sbjct: 57 YGSVAEAKAETGATVSVIYVPPPFAAAAIDEAVDAGVDLVICITEGIPVRDMIRTKQRME 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + L+GPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEA Q ++ GLGQS Sbjct: 117 GKKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAAGQLAEFGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV G + IDVL +F D T++++MVGEIGG AEE A+++KD KKP Sbjct: 177 TVVGIGGDPVSGLKHIDVLRMFNDDPDTDAVIMVGEIGGDAEETCARWIKDNM----KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG TAP G+ MGHAGA+ISGGKG A++K+ M+ GI + +PA +GR L +L Sbjct: 233 VVGFIAGVTAPAGKRMGHAGAIISGGKGTAQEKLAVMEACGIKVTRNPAEMGRLLKSVL 291 >gi|169765193|ref|XP_001817068.1| succinyl-CoA ligase [GDP-forming] subunit alpha [Aspergillus oryzae RIB40] gi|238503510|ref|XP_002382988.1| succinyl-CoA synthetase alpha subunit, putative [Aspergillus flavus NRRL3357] gi|83764922|dbj|BAE55066.1| unnamed protein product [Aspergillus oryzae] gi|220690459|gb|EED46808.1| succinyl-CoA synthetase alpha subunit, putative [Aspergillus flavus NRRL3357] Length = 330 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 175/296 (59%), Positives = 223/296 (75%), Gaps = 10/296 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFT 60 ++ ++ +TKV+ QG TGK GTFH EQAI Y T+VVGG +PKK GST+ ++ PVF Sbjct: 35 NLRINADTKVIFQGFTGKQGTFHAEQAIAYG-TKVVGGTNPKKAGSTH-----LDRPVFA 88 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 V +A + T A AS I+VPP A I E+IEAE+PL VCITEGIP DMVR+ L+ + Sbjct: 89 NVRDAVKETGATASAIFVPPPLAAKGIEEAIEAEVPLAVCITEGIPQHDMVRITDILKTQ 148 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +RL+GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 149 NKTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSL 208 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLK A KP Sbjct: 209 VVGIGGDPFSGTNFIDCLKIFLEDEETDGIIMIGEIGGSAEEDAAEFLK--ANNKHNKPA 266 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 VGF+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L+ Sbjct: 267 VGFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALEAAGVIVERSPASLGKALLN 322 >gi|260549009|ref|ZP_05823231.1| succinyl-CoA synthetase subunit alpha [Acinetobacter sp. RUH2624] gi|260408177|gb|EEX01648.1| succinyl-CoA synthetase subunit alpha [Acinetobacter sp. RUH2624] Length = 296 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 162/299 (54%), Positives = 224/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T ++++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSAQALDYG-TKVVGGVTPGKGGTT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T A+ASVIYVP D+I+E++++ + LIV ITEG+P +DM++ K LE + Sbjct: 56 TMKEAVRETNADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTIDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G I+ L+LF D T++I+M+GEIGG+AEEEAA+F+K KP Sbjct: 176 TCIGIGGDPIPGMNQIEALQLFQDDPDTDAIIMIGEIGGTAEEEAAEFIKSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGG+G AE+K A ++AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGQGTAEEKFAAFEKAGMAYTRSPAELGSTMLQVL 290 >gi|326468569|gb|EGD92578.1| succinyl-CoA ligase alpha-chain [Trichophyton tonsurans CBS 112818] Length = 330 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 173/294 (58%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T VVGG +PKK G PVF + Sbjct: 35 NLRINADTKVIFQGFTGKQGTFHAQQAIDYG-TNVVGGTNPKKAGETHLGK----PVFAS 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + T A AS I+VPPS A +I ESI AE+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 90 VEEAVKETGATASAIFVPPSVAAKSIEESIAAEVPLVVCITEGIPQHDMVRITDMLKSQN 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 150 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA FLK E K KP V Sbjct: 210 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAAFLKSENK--ANKPAV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AG +APPGR MGHAGA++SGGKGGA+ KI+A+++AG+ + SPA +G++L+ Sbjct: 268 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALQDAGVIVERSPASLGKTLL 321 >gi|169632628|ref|YP_001706364.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii SDF] gi|169794950|ref|YP_001712743.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii AYE] gi|184159271|ref|YP_001847610.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii ACICU] gi|213157645|ref|YP_002320443.1| succinyl-CoA synthetase, alpha subunit [Acinetobacter baumannii AB0057] gi|215482498|ref|YP_002324684.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Acinetobacter baumannii AB307-0294] gi|239502281|ref|ZP_04661591.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii AB900] gi|260557317|ref|ZP_05829533.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii ATCC 19606] gi|301346631|ref|ZP_07227372.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii AB056] gi|301510303|ref|ZP_07235540.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii AB058] gi|301596859|ref|ZP_07241867.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii AB059] gi|332854240|ref|ZP_08435260.1| succinyl-CoA synthetase, alpha subunit [Acinetobacter baumannii 6013150] gi|332866317|ref|ZP_08436922.1| succinyl-CoA synthetase, alpha subunit [Acinetobacter baumannii 6013113] gi|332872532|ref|ZP_08440501.1| succinyl-CoA synthetase, alpha subunit [Acinetobacter baumannii 6014059] gi|169147877|emb|CAM85740.1| succinyl-CoA synthetase alpha chain [Acinetobacter baumannii AYE] gi|169151420|emb|CAP00151.1| succinyl-CoA synthetase alpha chain [Acinetobacter baumannii] gi|183210865|gb|ACC58263.1| Succinyl-CoA synthetase, alpha subunit [Acinetobacter baumannii ACICU] gi|193078185|gb|ABO13132.2| succinyl-CoA synthetase alpha chain [Acinetobacter baumannii ATCC 17978] gi|213056805|gb|ACJ41707.1| succinyl-CoA synthetase, alpha subunit [Acinetobacter baumannii AB0057] gi|213988850|gb|ACJ59149.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Acinetobacter baumannii AB307-0294] gi|260409423|gb|EEX02725.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii ATCC 19606] gi|322509185|gb|ADX04639.1| sucD [Acinetobacter baumannii 1656-2] gi|323519213|gb|ADX93594.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii TCDC-AB0715] gi|325123208|gb|ADY82731.1| succinyl-CoA synthetase alpha chain [Acinetobacter calcoaceticus PHEA-2] gi|332728165|gb|EGJ59553.1| succinyl-CoA synthetase, alpha subunit [Acinetobacter baumannii 6013150] gi|332734665|gb|EGJ65769.1| succinyl-CoA synthetase, alpha subunit [Acinetobacter baumannii 6013113] gi|332739218|gb|EGJ70076.1| succinyl-CoA synthetase, alpha subunit [Acinetobacter baumannii 6014059] Length = 296 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 162/299 (54%), Positives = 224/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T ++++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSAQALDYG-TKVVGGVTPGKGGTT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T A+ASVIYVP D+I+E++++ + LIV ITEG+P +DM++ K LE + Sbjct: 56 TMKEAVRETNADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTIDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G I+ L+LF D T++I+M+GEIGG+AEEEAA+F+K KP Sbjct: 176 TCIGIGGDPIPGMNQIEALQLFQDDPDTDAIIMIGEIGGTAEEEAAEFIKSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGG+G AE+K A ++AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGQGTAEEKFAAFEKAGMAYTRSPAELGSTMLQVL 290 >gi|226951553|ref|ZP_03822017.1| succinyl-CoA synthetase alpha chain [Acinetobacter sp. ATCC 27244] gi|226837695|gb|EEH70078.1| succinyl-CoA synthetase alpha chain [Acinetobacter sp. ATCC 27244] Length = 296 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 162/299 (54%), Positives = 223/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T ++++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSAQALDYG-TKVVGGVTPGKGGTT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T A+ASVIYVP D+I+E++++ + LIV ITEG+P +DM++ K LE + Sbjct: 56 TMKEAVRETQADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTIDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G I+ L+LF D T++I+M+GEIGG+AEEEAA+F+K KP Sbjct: 176 TCIGIGGDPIPGMNQIEALQLFQDDPDTDAIIMIGEIGGTAEEEAAEFIKSNV----SKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGG+G AE+K A + AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGQGTAEEKFAAFERAGMAYTRSPAELGSTMMQVL 290 >gi|213851941|ref|ZP_03381473.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 263 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 164/272 (60%), Positives = 205/272 (75%), Gaps = 9/272 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T V+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTNVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 G++AG TAP G+ MGHAGA+I+GGKG A++K Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKF 263 >gi|240274070|gb|EER37588.1| conserved hypothetical protein [Ajellomyces capsulatus H143] gi|325095548|gb|EGC48858.1| succinyl-CoA ligase alpha-chain [Ajellomyces capsulatus H88] Length = 331 Score = 320 bits (820), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 172/294 (58%), Positives = 222/294 (75%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T VVGG +PKK G PVF T Sbjct: 36 NLRINSDTKVIYQGFTGKQGTFHAQQAIDY-GTNVVGGTNPKKAGQTHLGK----PVFAT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A +I E+IE+E+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 91 VRDAVKETGATASAIFVPPPLAAKSIEEAIESEVPLVVCITEGIPQHDMVRITDILKTQN 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLK E K + KP V Sbjct: 211 VGIGGDPFSGTNFIDCLKVFLNDEETDGIIMIGEIGGSAEEDAAEFLKQENK--KNKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L+ Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALETAGVIVERSPAALGKTLL 322 >gi|322436806|ref|YP_004219018.1| succinyl-CoA synthetase, alpha subunit [Acidobacterium sp. MP5ACTX9] gi|321164533|gb|ADW70238.1| succinyl-CoA synthetase, alpha subunit [Acidobacterium sp. MP5ACTX9] Length = 291 Score = 320 bits (820), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 173/298 (58%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVDKNT+++VQG+TG+ G FH + Y T VVGG+ P KG T G PVF Sbjct: 1 MAVLVDKNTRLIVQGITGREGLFHAQGCRDY-GTNVVGGVTPGKGGTTVDG----FPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T AN +VI+VPP A D I+E+ AEIPL++CITEGIP LDMV+ ++ S Sbjct: 56 TVAEAVASTGANVTVIFVPPPFAADGILEAAAAEIPLVICITEGIPTLDMVKAWDIVKAS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+++P K+GIMPG I ++GSVGI+S+SGTLTYEAV+Q + G+GQSTA Sbjct: 116 KSRLIGPNCPGVISPGKAKVGIMPGRIHKEGSVGIVSKSGTLTYEAVYQLTTRGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID L+L D TE+I+M+GEIGGSAEE AA+++K+ KKP+V Sbjct: 176 IGIGGDPIIGTTHIDALKLLNEDPETEAIIMIGEIGGSAEEAAAKYIKENV----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+ISGG+G A +K+ AM EAGI + SPA IG ++ LLG Sbjct: 232 GFIAGQTAPPGRRMGHAGAIISGGEGTAAEKMKAMAEAGITVVKSPAEIGEAMALLLG 289 >gi|194366935|ref|YP_002029545.1| succinyl-CoA synthetase subunit alpha [Stenotrophomonas maltophilia R551-3] gi|194349739|gb|ACF52862.1| succinyl-CoA synthetase, alpha subunit [Stenotrophomonas maltophilia R551-3] Length = 291 Score = 320 bits (820), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 175/299 (58%), Positives = 220/299 (73%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q I Y TQVVGG+ P KG T ++++PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMIEY-GTQVVGGVTPGKGGTT----HIDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T ANASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVQSTGANASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HPDTVLIGPNCPGVITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKQFV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ +L+ Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVVTVRSPGDLGAAIAKLV 290 >gi|294651210|ref|ZP_06728538.1| succinyl-CoA synthetase subunit alpha [Acinetobacter haemolyticus ATCC 19194] gi|292822863|gb|EFF81738.1| succinyl-CoA synthetase subunit alpha [Acinetobacter haemolyticus ATCC 19194] Length = 296 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 162/299 (54%), Positives = 223/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T ++++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSAQALDYG-TKVVGGVTPGKGGTT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T A+ASVIYVP D+I+E++++ + LIV ITEG+P +DM++ K LE + Sbjct: 56 TMKEAVRETQADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTIDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G I+ L+LF D T++I+M+GEIGG+AEEEAA+F+K KP Sbjct: 176 TCIGIGGDPIPGMNQIEALQLFQDDPDTDAIIMIGEIGGTAEEEAAEFIKSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGG+G AE+K A + AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGQGTAEEKFAAFERAGMAYTRSPAELGSTMMQVL 290 >gi|269139926|ref|YP_003296627.1| succinyl-CoA synthetase subunit alpha [Edwardsiella tarda EIB202] gi|267985587|gb|ACY85416.1| succinyl-CoA synthetase subunit alpha [Edwardsiella tarda EIB202] gi|304559761|gb|ADM42425.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Edwardsiella tarda FL6-60] Length = 290 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 167/298 (56%), Positives = 219/298 (73%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ T+V+ QG TG GTFH+EQA+ Y T++VGG+ P KG + G +PVF Sbjct: 1 MSILINHETRVICQGFTGSQGTFHSEQALAY-GTRLVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A+ASVIYVP D+I+E+I+ I LI+CITEGIP DM+ ++A+L++S Sbjct: 56 TVREAVLATDASASVIYVPAPFCKDSILEAIDGGISLIICITEGIPTQDMLVIRAKLDQS 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPNCPG++TP +CKIGIMPG I R G +GI+SRSGTLTYEAV QTS GLGQST Sbjct: 116 PGVRMIGPNCPGVITPGACKIGIMPGHIHRPGRIGIVSRSGTLTYEAVKQTSDVGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ G+ FID+L LF AD TE+IVM+GEIGG+AEEEAA ++K KP+ Sbjct: 176 CVGIGGDPIPGSSFIDILALFQADPQTEAIVMIGEIGGNAEEEAAAYIKAHV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG++ + L Sbjct: 232 IGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVVTVRSLADIGQAALRAL 289 >gi|262281283|ref|ZP_06059065.1| succinyl-CoA synthetase subunit alpha [Acinetobacter calcoaceticus RUH2202] gi|299768993|ref|YP_003731019.1| succinyl-CoA synthetase subunit alpha [Acinetobacter sp. DR1] gi|262257514|gb|EEY76250.1| succinyl-CoA synthetase subunit alpha [Acinetobacter calcoaceticus RUH2202] gi|298699081|gb|ADI89646.1| succinyl-CoA synthetase subunit alpha [Acinetobacter sp. DR1] Length = 296 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 162/299 (54%), Positives = 223/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T ++++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSAQALDYG-TKVVGGVTPGKGGTT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T A+ASVIYVP D+I+E++++ + LIV ITEG+P +DM++ K LE + Sbjct: 56 TMKEAVRETNADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTIDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G I+ L+LF D T++I+M+GEIGG+AEEEAA+F+K KP Sbjct: 176 TCIGIGGDPIPGMNQIEALQLFQDDPDTDAIIMIGEIGGTAEEEAAEFIKSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGG+G AE+K A + AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGQGTAEEKFAAFERAGMAYTRSPAELGSTMLQVL 290 >gi|320588196|gb|EFX00671.1| succinyl-synthetase alpha [Grosmannia clavigera kw1407] Length = 331 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 174/293 (59%), Positives = 221/293 (75%), Gaps = 6/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKVL QG TGK GTFH +QA+ Y T+VVGG +PKK T G +PVF T Sbjct: 34 NLRINSDTKVLYQGFTGKQGTFHAQQALDY-GTKVVGGTNPKKAGTTHLG----LPVFGT 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V+EA ++T A A+ I+VPP A I E+I AEIPLIVCITEGIP DM+R+ L+ +S Sbjct: 89 VSEAVKQTGATATAIFVPPPVAASGIEEAIAAEIPLIVCITEGIPQHDMLRITNILKTQS 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 149 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FLADE TE I+M+GEIGGSAEE+AA+FL KP+V Sbjct: 209 VGIGGDPFSGTNFIDCLKVFLADEETEGIIMIGEIGGSAEEDAAEFLLANNTVNGGKPVV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + PSPA +G++L Sbjct: 269 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKIRALEAAGVVVEPSPAGLGKAL 321 >gi|189345876|ref|YP_001942405.1| succinyl-CoA synthetase, alpha subunit [Chlorobium limicola DSM 245] gi|189340023|gb|ACD89426.1| succinyl-CoA synthetase, alpha subunit [Chlorobium limicola DSM 245] Length = 299 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 172/303 (56%), Positives = 227/303 (74%), Gaps = 10/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T++LVQG+TG GTFHT Q IL T VV G+ P KG + G + + Sbjct: 1 MSVLVNKDTRLLVQGITGGEGTFHTSQ-ILEYGTNVVAGVTPGKGGILYHGNDKDRFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV EA E+T AN SVI+VP AGDAI+E+ +A + +I+CITEG+PV DM+R A Sbjct: 60 VPVFNTVKEAVEKTEANTSVIFVPAPFAGDAIMEAADAGLKVIICITEGVPVNDMMRAYA 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + L+GPNCPG++TP KIGIMPG I +KGS+G++SRSGTLTYEAV Q + GL Sbjct: 120 FVQEKGAVLVGPNCPGVITPGEAKIGIMPGFIHKKGSIGVVSRSGTLTYEAVHQLTAVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT FID + +F D+ TE +VM+GEIGGSAEEEAA+++ K+ Sbjct: 180 GQSTCIGIGGDPIIGTRFIDAVRMFAKDDETEGLVMIGEIGGSAEEEAAEYI----KKYF 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VGF+AG+TAPPGR MGHAGA++SGGKG AEDKI AM+ AGI + +P IG ++++ Sbjct: 236 NKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAEDKIRAMEAAGIHVVDNPGDIGEAMMK 295 Query: 296 LLG 298 LG Sbjct: 296 ALG 298 >gi|83816633|ref|YP_444808.1| succinyl-CoA synthetase, alpha subunit [Salinibacter ruber DSM 13855] gi|83758027|gb|ABC46140.1| succinyl-CoA synthetase, alpha subunit [Salinibacter ruber DSM 13855] Length = 288 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 166/297 (55%), Positives = 211/297 (71%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD +T+V+VQGLTG GTFH EQ + Y T VV G+ P KG G PV+ Sbjct: 1 MSILVDDDTRVVVQGLTGSEGTFHAEQMMDYG-TNVVAGVTPGKGGQTHLG----RPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+ AN S+I+VPP A DAI ES +A +I+CITEGIPV DM ++K Sbjct: 56 TVAEAVEQENANTSIIFVPPPFAADAIQESADAGAEVIICITEGIPVADMKPTYQYVKKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG++TP + K+GIMP IF GS+GI+SRSGTLTYEAV Q ++ G GQSTA Sbjct: 116 GAHLIGPNCPGVITPGAAKVGIMPAMIFEPGSIGIISRSGTLTYEAVDQITRAGFGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID LELF D T+ IV++GEIGG+ E+EAA++++D P+ Sbjct: 176 VGIGGDPVIGTRFIDALELFEDDPDTDGIVLIGEIGGTDEQEAARYVQDH----MDTPVF 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGG G AE K A++EAG + +PA IG ++ ++L Sbjct: 232 GFIAGRTAPPGRRMGHAGAIVSGGSGTAEAKFQALEEAGATVVKNPALIGETVQDVL 288 >gi|110834353|ref|YP_693212.1| succinyl-CoA synthetase subunit alpha [Alcanivorax borkumensis SK2] gi|110647464|emb|CAL16940.1| succinyl-CoA synthetase, alpha subunit [Alcanivorax borkumensis SK2] Length = 291 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 170/299 (56%), Positives = 213/299 (71%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GT H+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGSQGTLHSEQAIEY-GTQMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EK 119 TVAEA T A ASVIYVP D+I+E+ +A I LIVCITEG+P LDM+ VK + K Sbjct: 56 TVAEAVAETGATASVIYVPAPFCKDSILEAADAGIELIVCITEGVPALDMLFVKEYISRK 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT++ G GQS+ Sbjct: 116 DGIRLIGPNCPGVITPGECKIGIMPGHIHTPGKVGIVSRSGTLTYEAVNQTTKLGFGQSS 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G FID LELF D TE+IVMVGEIGG+AE+EAA ++K+ KP+ Sbjct: 176 CIGIGGDPIPGMTFIDALELFQNDPQTEAIVMVGEIGGTAEDEAAAYIKEHV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG TAP G+ MGHAGA+I+GGKG A++K ++ AG+ +PA IG+++ E G Sbjct: 232 VSYIAGVTAPAGKRMGHAGAIIAGGKGTADEKFAVLEAAGVKTVRNPAEIGKAVKEATG 290 >gi|195953299|ref|YP_002121589.1| succinyl-CoA synthetase, alpha subunit [Hydrogenobaculum sp. Y04AAS1] gi|195932911|gb|ACG57611.1| succinyl-CoA synthetase, alpha subunit [Hydrogenobaculum sp. Y04AAS1] Length = 291 Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 165/299 (55%), Positives = 217/299 (72%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG+TGK G+FH Q Y TQVV G+ P K G +PVF Sbjct: 1 MSILVNKNTKVVVQGITGKEGSFHAIQCKNY-GTQVVAGVTPGKEGIEVEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A + T AN S+I+VPP A DAI+E+ +A I LI+CITEGIPV DM+ VK L+K+ Sbjct: 56 TVENAVKNTGANCSLIFVPPPFAADAIVEAADAGIELIICITEGIPVKDMIPVKYYLKKN 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +++LIGPNCPG +TP K+GIMPG IF+KG+VGI+SRSGTLTYEA FQ S +GQS Sbjct: 116 YPNTKLIGPNCPGAITPQEAKVGIMPGHIFKKGNVGIVSRSGTLTYEAAFQLSNLNIGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +A+GIGGDPV G DV+ +F D+ T++I+M+GEIGG++EEEAA+++ KKP Sbjct: 176 SAIGIGGDPVHGLSHKDVVAMFNEDQETKAILMIGEIGGTSEEEAAEYIASNV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + ++AG TAPPG+ MGHAGA+ISGGKG AE K+ A+KEA + + +PA IG+ + + L Sbjct: 232 VFAYIAGITAPPGKRMGHAGAIISGGKGTAESKMKALKEANVTVIENPAFIGKVIADAL 290 >gi|327300623|ref|XP_003235004.1| succinyl-CoA synthetase alpha subunit [Trichophyton rubrum CBS 118892] gi|326462356|gb|EGD87809.1| succinyl-CoA synthetase alpha subunit [Trichophyton rubrum CBS 118892] Length = 330 Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 173/294 (58%), Positives = 218/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T VVGG +PKK G PVF + Sbjct: 35 NLRINADTKVIFQGFTGKQGTFHAQQAIDYG-TNVVGGTNPKKAGETHLGK----PVFAS 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + T A AS I+VPPS A +I ESI AE+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 90 VEEAVKETGATASAIFVPPSVAAKSIEESIAAEVPLVVCITEGIPQHDMVRITDMLKSQN 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 150 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA FLK E K KP V Sbjct: 210 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAAFLKSENK--ANKPAV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AG +APPGR MGHAGA++SGGKGGA+ KI A+++AG+ + SPA +G++L+ Sbjct: 268 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALQDAGVIVERSPASLGKTLL 321 >gi|224824503|ref|ZP_03697610.1| succinyl-CoA synthetase, alpha subunit [Lutiella nitroferrum 2002] gi|224602996|gb|EEG09172.1| succinyl-CoA synthetase, alpha subunit [Lutiella nitroferrum 2002] Length = 294 Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 177/299 (59%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKVLVQG TGK GTFH EQA L T+VVGG+ P KG + G +PVF Sbjct: 1 MSVLVNKDTKVLVQGFTGKNGTFHAEQA-LKVGTKVVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A +T A+ASVIYVP + A D+I+E+++A + LIVCITEG+P LDM+ VK ++++ Sbjct: 56 TMKDAVRQTQADASVIYVPAAFAKDSILEAVDAGVKLIVCITEGVPTLDMLYVKKAVDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+TP CKIGIMP I G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GIRLIGPNCPGIITPGECKIGIMPWHIHNPGRIGIVSRSGTLTYEAVAQTTALGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID L+LF D T++IVM+GEIGGSAEEEAA+F K KP+V Sbjct: 176 IGIGGDPIPGTSHIDALKLFQDDPDTDAIVMIGEIGGSAEEEAAEFAKAYV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA IG+++ ELL S Sbjct: 232 GYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFKAFEQAGIAYTRSPAEIGKTMFELLKS 290 >gi|188996559|ref|YP_001930810.1| succinyl-CoA synthetase, alpha subunit [Sulfurihydrogenibium sp. YO3AOP1] gi|188931626|gb|ACD66256.1| succinyl-CoA synthetase, alpha subunit [Sulfurihydrogenibium sp. YO3AOP1] Length = 293 Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 169/300 (56%), Positives = 220/300 (73%), Gaps = 13/300 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN-VPVF 59 MS+LV+KNTKV+VQG+TG+ G+FH Q Y TQVVGG+ P K G NV +PVF Sbjct: 1 MSVLVNKNTKVIVQGITGREGSFHATQCKAY-GTQVVGGVTPGK-----KGENVEGIPVF 54 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EA + A+ S+I+VPP A DAI+E+++A I ++CITEGIPV DM+ VK ++K Sbjct: 55 DTVNEAVKEAGADCSLIFVPPPFAADAILEAVDAGIKTVICITEGIPVNDMLPVKQYIKK 114 Query: 120 S--SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + LIGPNCPG++TP KIGIMPG IF+KG+VGI+SRSGTLTYEA +Q + G+GQ Sbjct: 115 YYPDTVLIGPNCPGVITPGEAKIGIMPGHIFKKGNVGIVSRSGTLTYEAAYQLTTRGIGQ 174 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 STAVGIGGDP+ GT F DVL+ F D TE+IVM+GEIGG+AEEEAA+F+K KK Sbjct: 175 STAVGIGGDPIPGTVFADVLKWFQDDPETEAIVMIGEIGGTAEEEAAEFIKSYV----KK 230 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+V ++AG TAPPG+ MGHAGA+ISGGKG A +K A++ AG +P+ IG ++ ++L Sbjct: 231 PVVAYIAGVTAPPGKRMGHAGAIISGGKGTAAEKYKALESAGAITVKNPSIIGETVEKIL 290 >gi|312959848|ref|ZP_07774364.1| succinyl-CoA synthetase alpha [Pseudomonas fluorescens WH6] gi|311286014|gb|EFQ64579.1| succinyl-CoA synthetase alpha [Pseudomonas fluorescens WH6] Length = 293 Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 169/298 (56%), Positives = 214/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG+TG G+FHT+QAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGITGSQGSFHTQQAIEY-GTKMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP D+I+E+ I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKDAVAATGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVVLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|256822755|ref|YP_003146718.1| succinyl-CoA synthetase subunit alpha [Kangiella koreensis DSM 16069] gi|256796294|gb|ACV26950.1| succinyl-CoA synthetase, alpha subunit [Kangiella koreensis DSM 16069] Length = 290 Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 170/298 (57%), Positives = 211/298 (70%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG+TG GTFHTEQAI Y T +VGG+ P KG G +PVF Sbjct: 1 MSILINKDTKVICQGITGSQGTFHTEQAIEY-GTNMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP D+I+E+ I L+VCITEGIP +DM+ K + Sbjct: 56 TVKDAVEATGAEASVIYVPAPFCKDSILEAANGGIKLVVCITEGIPTMDMLEAKIVCDNL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDFGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D ATE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQDDPATEAIVMIGEIGGSAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A +K A+++AG+ S A IG L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAAEKFAALEDAGVKTVRSLADIGNGLKEVTG 289 >gi|322700273|gb|EFY92029.1| succinyl-CoA ligase alpha-chain precursor [Metarhizium acridum CQMa 102] Length = 389 Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 170/296 (57%), Positives = 225/296 (76%), Gaps = 8/296 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFT 60 ++ ++ +TKV+ QG TGK GTFH +QAI Y T+VVGG +PKK GST+ +++PVF Sbjct: 92 NLRINSDTKVIFQGFTGKQGTFHAQQAIEYG-TKVVGGTNPKKAGSTH-----LDLPVFK 145 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 V+EA + T A A+ ++VPP A I E+++AEIPL+VCITEGIP DMVR+ + L+ + Sbjct: 146 NVSEAVKETGATATALFVPPPVAAAGIEEALQAEIPLVVCITEGIPQHDMVRITSMLKSQ 205 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 206 SKTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSL 265 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT FID L++F DE T+ I+M+GEIGGSAEEEAA+FLK G KP+ Sbjct: 266 VVGIGGDPFSGTNFIDCLKVFTEDEDTDGIIMIGEIGGSAEEEAAEFLKQANTVGGGKPV 325 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 V F+AG +APPGR MGHAGA+++GGKGGA+ KI A++ AG+ + SPA +G++L + Sbjct: 326 VSFIAGISAPPGRRMGHAGAIVAGGKGGADSKIKALEAAGVIVERSPAGLGKALYD 381 >gi|187927575|ref|YP_001898062.1| succinyl-CoA synthetase subunit alpha [Ralstonia pickettii 12J] gi|187724465|gb|ACD25630.1| succinyl-CoA synthetase, alpha subunit [Ralstonia pickettii 12J] Length = 293 Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 162/301 (53%), Positives = 217/301 (72%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TV +AK +T A SVIYVPP+GA DAI E++EAE+ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YATVKDAKAQTGATVSVIYVPPAGAADAIWEAVEAELDLVVCITEGIPVRDMMMVKDKMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K+ S+ L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KAGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAYWIKDN----MK 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+E GI +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEECGIKTTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|293610892|ref|ZP_06693191.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826544|gb|EFF84910.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 296 Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 162/299 (54%), Positives = 224/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T ++++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSAQALDYG-TKVVGGVTPGKGGTT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T A+ASVIYVP D+I+E++++ + LIV ITEG+P +DM++ K LE + Sbjct: 56 TMKEAVGETNADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTIDMLKAKRYLETN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G I+ L+LF D T++I+M+GEIGG+AEEEAA+F+K KP Sbjct: 176 TCIGIGGDPIPGMNQIEALQLFQDDPDTDAIIMIGEIGGTAEEEAAEFIKSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+ MGHAGA+ISGG+G AE+K A ++AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGQGTAEEKFAAFEKAGMAYTRSPAELGSTMLQVL 290 >gi|78048904|ref|YP_365079.1| succinyl-CoA synthetase subunit alpha [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037334|emb|CAJ25079.1| succinyl-CoA synthetase alpha subunit [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 291 Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 173/299 (57%), Positives = 219/299 (73%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG T ++N+PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGTT----HINLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVQATGADASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HPDTVLIGPNCPGVITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D +LF D TE I+MVGEIGG AEE A+++K+ KKP Sbjct: 176 TCIGIGGDPINGLNFVDCFKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKNHV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L+ Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAALV 290 >gi|194335584|ref|YP_002017378.1| succinyl-CoA synthetase, alpha subunit [Pelodictyon phaeoclathratiforme BU-1] gi|194308061|gb|ACF42761.1| succinyl-CoA synthetase, alpha subunit [Pelodictyon phaeoclathratiforme BU-1] Length = 299 Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 169/303 (55%), Positives = 230/303 (75%), Gaps = 10/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T++LVQG+TG GTFHT Q IL T VV G+ P KG + G + Sbjct: 1 MSVLVNKDTRLLVQGITGGEGTFHTSQ-ILEYGTNVVAGVTPGKGGILYHGNEKDKFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV EA ++ ANA+VI+VP + A DA++E+ +A + +I+CITEGIPV DM++ A Sbjct: 60 VPVFDTVREAVQKAEANATVIFVPAAFAADAVMEAADAGLKVIICITEGIPVNDMMKAYA 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + L+GPNCPG++TP K+GIMPG I +KG++G++SRSGTLTYEAV Q ++ GL Sbjct: 120 FVKQKGAVLVGPNCPGVITPGEAKVGIMPGFIHKKGTIGVVSRSGTLTYEAVHQLTEVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT+FID ++LF D+ TE +VM+GEIGGSAEEEAA ++K+ Sbjct: 180 GQSTCIGIGGDPIIGTQFIDAIKLFAMDDETEGLVMIGEIGGSAEEEAAAYIKEY----F 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP++GF+AG+TAPPGR MGHAGA++SGGKG AEDKI AM+ AGI + SPA IG ++++ Sbjct: 236 KKPVIGFIAGRTAPPGRRMGHAGAIVSGGKGTAEDKITAMEAAGIHVVKSPADIGEAMLK 295 Query: 296 LLG 298 LG Sbjct: 296 ALG 298 >gi|77917862|ref|YP_355677.1| succinyl-CoA synthetase subunit alpha [Pelobacter carbinolicus DSM 2380] gi|77543945|gb|ABA87507.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Pelobacter carbinolicus DSM 2380] Length = 298 Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 162/300 (54%), Positives = 217/300 (72%), Gaps = 15/300 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ---TQVVGGIHPKKGSTYWTGGNVNVP 57 M+IL+D++++++VQGLTG +G H L C+ +QVV G+ P KG T+ ++P Sbjct: 1 MAILIDRHSRIVVQGLTGSSGRRHG----LLCRDYGSQVVAGVTPGKGGTHVE----DIP 52 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 VF TVAEA ER A+ ++I VPP A +AI+E+ +A + L VCITEGIPV DMV V L Sbjct: 53 VFDTVAEAVERCQADVTMILVPPQAAAEAILEADQAGVGLAVCITEGIPVRDMVLVNRAL 112 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 S+ RLIGPNCPG++TPD CK+GI+PG I R GS+G++SRSGTLTYEAV Q S GLGQ Sbjct: 113 TDSAMRLIGPNCPGLITPDQCKVGILPGDIHRPGSIGVVSRSGTLTYEAVQQLSDAGLGQ 172 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 ST VGIGGDP+ GT FID+L LF D TE + ++GEIGGSAEEEAA ++K +K Sbjct: 173 STCVGIGGDPIIGTSFIDILALFNDDPDTEGVFLIGEIGGSAEEEAAAWIKQYM----RK 228 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+ ++AG TAPPG+ MGHAGA++SGG G AEDKI +++ +G+ +A SPAR+ ++ + L Sbjct: 229 PVAAYIAGVTAPPGKRMGHAGAIVSGGSGRAEDKIASLRSSGVQVAGSPARMAEAMQDAL 288 >gi|328953555|ref|YP_004370889.1| succinyl-CoA synthetase, alpha subunit [Desulfobacca acetoxidans DSM 11109] gi|328453879|gb|AEB09708.1| succinyl-CoA synthetase, alpha subunit [Desulfobacca acetoxidans DSM 11109] Length = 290 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 167/290 (57%), Positives = 208/290 (71%), Gaps = 9/290 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNT V+VQG+TGK G+FH Q I Y T+VV G+ P KG +VPVF Sbjct: 1 MSVLVDKNTHVVVQGITGKEGSFHARQCIAY-GTKVVAGVTPGKGGQKMD----DVPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA AN S+I+VPP+ A DAI+E+ A I +IVCITEGIP L+MV+V RLE + Sbjct: 56 TVKEAVAAAGANTSLIFVPPAFAADAILEAAGAGIKVIVCITEGIPTLEMVKVARRLEGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI++P K+GIMPG I ++G V ++SRSGTLTYEAV+Q + GLGQST Sbjct: 116 DIRLIGPNCPGIISPGQAKVGIMPGPIHQEGPVALVSRSGTLTYEAVYQLTLRGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FID+L LF AD T+ IV++GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIIGTNFIDMLRLFQADPQTQGIVLIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 F+AG TAPPG+ MGHAGA+ISGG G A DKI A++ AG + + +G Sbjct: 232 AFIAGMTAPPGKRMGHAGAIISGGSGRAVDKIAALEAAGATVVRNIGELG 281 >gi|307825852|ref|ZP_07656068.1| succinyl-CoA synthetase, alpha subunit [Methylobacter tundripaludum SV96] gi|307733160|gb|EFO04021.1| succinyl-CoA synthetase, alpha subunit [Methylobacter tundripaludum SV96] Length = 288 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 174/293 (59%), Positives = 220/293 (75%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+TKV+ QG TGK GTFH++QA+ Y TQ+VGG+ P++G G +PVF Sbjct: 1 MSILIDKDTKVICQGFTGKQGTFHSQQALDY-GTQLVGGVTPERGGETHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVPP A DAI+E+++A I LIVCITEGIP+L M+RVKA +E + Sbjct: 56 TVQDAVSGTGATASVIYVPPFYAADAILEAVDAGIKLIVCITEGIPILQMLRVKAAMEGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I GS+GI+SRSGTLTYE+V QT+ +GLGQST Sbjct: 116 GVLLIGPNCPGVITPGECKIGIMPGHIHLPGSIGIVSRSGTLTYESVHQTTAQGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G F+DVL F ADE T+ IVMVGEIGG EEEAA+++K KP+V Sbjct: 176 VGIGGDPIHGMNFVDVLSRFQADEQTKGIVMVGEIGGGEEEEAAEYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG+TAPPG+ MGHAGA+++GGKG AE K+ A+K AGI + SP IG ++ Sbjct: 232 AYIAGQTAPPGKRMGHAGAIVTGGKGTAEGKVAALKAAGIEVVSSPTDIGVAM 284 >gi|58581217|ref|YP_200233.1| succinyl-CoA synthetase subunit alpha [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623134|ref|YP_450506.1| succinyl-CoA synthetase subunit alpha [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58425811|gb|AAW74848.1| succinyl-CoA synthetase alpha subunit [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367074|dbj|BAE68232.1| succinyl-CoA synthetase alpha subunit [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 291 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 173/299 (57%), Positives = 220/299 (73%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG T ++++PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGTT----HIDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVKATGADASVIYVPPPFAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 SSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HADTVLIGPNCPGVITPGQCKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K+ KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKNHV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L+ Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAALV 290 >gi|319795822|ref|YP_004157462.1| succinyL-CoA synthetase, alpha subunit [Variovorax paradoxus EPS] gi|315598285|gb|ADU39351.1| succinyl-CoA synthetase, alpha subunit [Variovorax paradoxus EPS] Length = 299 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 158/299 (52%), Positives = 216/299 (72%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+T+V+ QG+TGK G FHT Y Q V G++P K + G +PV Sbjct: 1 MSILINKHTRVITQGITGKTGQFHTAMCRDYGNGQKCFVAGVNPNKAGKSFDG----IPV 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV +AK T A SVIYVPP A AI E+++AE+ L++CITEGIPV DM+R + R+E Sbjct: 57 FGTVKDAKAETGATVSVIYVPPPFAAAAIDEAVDAELDLVICITEGIPVRDMIRTRHRME 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S + L+GPNCPG++TPD KIGIMPG I ++G +G++SRSGTLTYEA Q ++ G+GQS Sbjct: 117 GSRTLLLGPNCPGLITPDEIKIGIMPGHIHQRGRIGVVSRSGTLTYEAASQLARFGIGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV G + IDVL++F D T++++MVGEIGG+ EE A+++KD +KP Sbjct: 177 TVVGIGGDPVGGLKHIDVLKMFNDDPRTDAVIMVGEIGGNEEEICARWIKDHM----RKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG TAPPG+ MGHAGA++SGG+G A++K+ MKE GI + +PA +G+ L L+ Sbjct: 233 VVGFIAGATAPPGKRMGHAGAIVSGGRGTAQEKLAVMKECGIHVTSNPAEMGKLLASLV 291 >gi|90416061|ref|ZP_01223994.1| succinyl-CoA synthetase alpha chain [marine gamma proteobacterium HTCC2207] gi|90332435|gb|EAS47632.1| succinyl-CoA synthetase alpha chain [marine gamma proteobacterium HTCC2207] Length = 290 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 169/298 (56%), Positives = 213/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++++TKV+ QG TG GTFH+EQA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILINRDTKVICQGFTGGQGTFHSEQALEY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E T A ASVIYVP + D+I+E+ A + L+VCITEGIP DM+ K + Sbjct: 56 TVAEAVETTGAEASVIYVPAAFCKDSILEAANAGLKLVVCITEGIPTQDMLDCKVVCDTL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDYGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L LF D ATE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSSFIDILALFEKDPATEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA++SGGKG A++K A+++AG+ S A IG L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIVSGGKGTADEKFAALEDAGVKTVRSLADIGAGLKEITG 289 >gi|294506661|ref|YP_003570719.1| succinyl-CoA synthetase, alpha subunit [Salinibacter ruber M8] gi|294342989|emb|CBH23767.1| succinyl-CoA synthetase, alpha subunit [Salinibacter ruber M8] Length = 288 Score = 318 bits (816), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 165/297 (55%), Positives = 210/297 (70%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD +T+V+VQG TG GTFH EQ + Y T VV G+ P KG G PV+ Sbjct: 1 MSILVDDDTRVVVQGFTGSEGTFHAEQMMDYG-TNVVAGVTPGKGGQTHLG----RPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+ AN S+I+VPP A DAI ES +A +I+CITEGIPV DM ++K Sbjct: 56 TVAEAVEQENANTSIIFVPPPFAADAIQESADAGAEVIICITEGIPVADMKPTYQYVKKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG++TP + K+GIMP IF GS+GI+SRSGTLTYEAV Q ++ G GQSTA Sbjct: 116 GAHLIGPNCPGVITPGAAKVGIMPAMIFEPGSIGIISRSGTLTYEAVDQITRAGFGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID LELF D T+ IV++GEIGG+ E+EAA++++D P+ Sbjct: 176 VGIGGDPVIGTRFIDALELFEDDPDTDGIVLIGEIGGTDEQEAARYVQDH----MDTPVF 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGG G AE K A++EAG + +PA IG ++ ++L Sbjct: 232 GFIAGRTAPPGRRMGHAGAIVSGGSGTAEAKFQALEEAGATVVKNPALIGETVQDVL 288 >gi|197099378|ref|NP_001126825.1| succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Pongo abelii] gi|55732769|emb|CAH93082.1| hypothetical protein [Pongo abelii] Length = 346 Score = 318 bits (816), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 182/294 (61%), Positives = 226/294 (76%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQGK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLYV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE IV++GEIGG+AEE AA+FLK KP+V Sbjct: 225 GIGGDPFNGTDFIDCLEIFLNDSATEGIVLIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 338 >gi|328866700|gb|EGG15083.1| succinate-CoA ligase [Dictyostelium fasciculatum] Length = 320 Score = 318 bits (816), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 178/296 (60%), Positives = 228/296 (77%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ++V+K+TKV+ QG TGK GTFH++QAI Y TQ+VGG+ P KG + ++++PVF +V Sbjct: 27 VMVNKDTKVICQGFTGKQGTFHSQQAIDY-GTQMVGGVSPGKGGSK----HLDLPVFNSV 81 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 EAK+ T ANASVIYVPP A AIIE+IEAE+ L+VCITEGIP DMVRVK L + + Sbjct: 82 KEAKKATDANASVIYVPPPYAAQAIIEAIEAEMELVVCITEGIPQQDMVRVKYLLNRQNK 141 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST V Sbjct: 142 TRLIGPNCPGIIKPGECKIGIMPGHIHRPGKIGIVSRSGTLTYEAVAQTTAVGLGQSTCV 201 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D L+LF D TE I+++GEIGG AEEEAA +LK+ KP+V Sbjct: 202 GIGGDPFNGTNFVDCLKLFTKDPQTEGIILIGEIGGEAEEEAALWLKENPT---DKPVVS 258 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKGGA+ K+ A+++AG+ ++ SPA++G +++E + Sbjct: 259 FIAGLTAPPGRRMGHAGAIISGGKGGADSKMKALQDAGVIMSLSPAKLGVTMLEAM 314 >gi|309779741|ref|ZP_07674498.1| succinyl-CoA synthetase, alpha subunit [Ralstonia sp. 5_7_47FAA] gi|308921480|gb|EFP67120.1| succinyl-CoA synthetase, alpha subunit [Ralstonia sp. 5_7_47FAA] Length = 293 Score = 318 bits (815), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 162/301 (53%), Positives = 217/301 (72%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TV +AK +T A SVIYVPP+GA DAI E++EAE+ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YATVKDAKAQTGATVSVIYVPPAGAADAIWEAVEAELDLVVCITEGIPVRDMMMVKDKMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K+ S+ L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KAGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAYWIKDN----MK 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+E GI +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEECGIKTTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|188575736|ref|YP_001912665.1| succinyl-CoA synthetase subunit alpha [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520188|gb|ACD58133.1| chain A, Succinyl-Coa Synthetase (Succinate-Coa Ligase) (Adp-Forming) (E.C.) [Xanthomonas oryzae pv. oryzae PXO99A] Length = 291 Score = 318 bits (815), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 173/299 (57%), Positives = 220/299 (73%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG T ++++PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGTT----HIDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVKATGADASVIYVPPPFAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 SSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HADTVLIGPNCPGVITPGQCKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K+ KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKNHI----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L+ Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAALV 290 >gi|163784985|ref|ZP_02179728.1| succinyl-CoA ligase alpha subunit [Hydrogenivirga sp. 128-5-R1-1] gi|159879744|gb|EDP73505.1| succinyl-CoA ligase alpha subunit [Hydrogenivirga sp. 128-5-R1-1] Length = 292 Score = 318 bits (815), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 165/299 (55%), Positives = 220/299 (73%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KNTKV+VQG+TG+ G+FH Q Y TQVVGG+ P KG G +PVF Sbjct: 1 MSVLVNKNTKVIVQGITGREGSFHATQCKAY-GTQVVGGVTPGKGGQEVEG----IPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA + T A+ S+I+VPP A DAI+E+++A + ++CITEGIPV DM+ VK ++ Sbjct: 56 SVREAVDNTGADCSLIFVPPPFAADAIVEAVDAGVKTVICITEGIPVNDMIPVKNYIKTY 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP+ KIGIMPG IF+KG+VG++SRSGTLTYEA +Q +Q G+GQS Sbjct: 116 YPETVLIGPNCPGVITPEEAKIGIMPGHIFKKGNVGLVSRSGTLTYEAAYQLTQRGIGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV GT F DVL+ F D TE+IVM+GEIGG+AEEEAA+F+K+ KP Sbjct: 176 TAVGIGGDPVPGTVFADVLKWFQDDPETEAIVMIGEIGGTAEEEAAEFIKEYV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +V ++AG TAPPG+ MGHAGA+I+GGKG AE+K A++ AG + + IG + ++L Sbjct: 232 VVAYIAGVTAPPGKRMGHAGAIIAGGKGTAEEKYKALEAAGATTVKNISTIGEVVEKVL 290 >gi|229589341|ref|YP_002871460.1| succinyl-CoA synthetase subunit alpha [Pseudomonas fluorescens SBW25] gi|229361207|emb|CAY48071.1| succinyl-CoA synthetase alpha chain [Pseudomonas fluorescens SBW25] Length = 293 Score = 318 bits (815), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 169/298 (56%), Positives = 214/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG+TG G+FHT+QAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGITGSQGSFHTQQAIEY-GTKMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP D+I+E+ I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKDAVAATGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVILIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLADIGKALSELTG 289 >gi|163846286|ref|YP_001634330.1| succinyl-CoA synthetase subunit alpha [Chloroflexus aurantiacus J-10-fl] gi|222524042|ref|YP_002568512.1| succinyl-CoA synthetase subunit alpha [Chloroflexus sp. Y-400-fl] gi|163667575|gb|ABY33941.1| succinyl-CoA synthetase, alpha subunit [Chloroflexus aurantiacus J-10-fl] gi|222447921|gb|ACM52187.1| succinyl-CoA synthetase, alpha subunit [Chloroflexus sp. Y-400-fl] Length = 295 Score = 318 bits (815), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 171/299 (57%), Positives = 214/299 (71%), Gaps = 7/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NT++LVQG+TGK G FHT Q I Y T VV G+ P +G G V PVF Sbjct: 1 MSILIDANTRLLVQGITGKEGEFHTRQMIEY-GTNVVAGVVPGRGGQKAIDGRV--PVFN 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T AN +VIYVP A DAI ES A IPLIVCITEGIP LDMV A +++ Sbjct: 58 TVAEAVAATGANTAVIYVPAPFAPDAIRESAAARIPLIVCITEGIPALDMVSTYAFVQEC 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG+LTP + K+GI+PG+I G VGI+S+SGTLTYEAV ++ G+GQST Sbjct: 118 GVRLIGPNCPGLLTPGAAKVGIIPGNIAMPGPVGIVSKSGTLTYEAVDALTRLGIGQSTI 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVL +F AD TE+IV++GEIGG+AE+EAA ++K KP+V Sbjct: 178 VGIGGDPIIGTNFIDVLSMFEADPQTEAIVLIGEIGGTAEQEAAAYIKAHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPG+ MGHAGA+ISGG+G A++KI A++ G+ +A P I + E L + Sbjct: 234 GFIAGQTAPPGKRMGHAGAIISGGEGTAQEKIAALESVGVRVARMPTDIAGLVKEALSA 292 >gi|121712676|ref|XP_001273949.1| succinyl-CoA synthetase alpha subunit, putative [Aspergillus clavatus NRRL 1] gi|119402102|gb|EAW12523.1| succinyl-CoA synthetase alpha subunit, putative [Aspergillus clavatus NRRL 1] Length = 331 Score = 318 bits (815), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 172/294 (58%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKVL QG TGK GTFH EQAI Y T+VVGG +PKK T +++ PVF Sbjct: 36 NLRINGDTKVLFQGFTGKQGTFHAEQAIAYG-TKVVGGTNPKKAGTM----HLDRPVFAN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A I E+IEAE+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 91 VRDAIKETGATASAIFVPPPLAAAGIEEAIEAEMPLVVCITEGIPQHDMVRITDILKTQN 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL D+ T+ I+M+GEIGGSAEE+AA+F K A KP V Sbjct: 211 VGIGGDPFSGTNFIDCLRIFLEDKETDGIIMIGEIGGSAEEDAAEFFK--ANNKYNKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L+ Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALESAGVTVERSPAHLGKTLL 322 >gi|166713133|ref|ZP_02244340.1| succinyl-CoA synthetase subunit alpha [Xanthomonas oryzae pv. oryzicola BLS256] Length = 291 Score = 318 bits (815), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 173/299 (57%), Positives = 220/299 (73%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG T ++++PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGTT----HIDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVKATGADASVIYVPPPFAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 FPHTVLIGPNCPGVITPGQCKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K+ KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKNHV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L+ Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAALV 290 >gi|295674665|ref|XP_002797878.1| succinyl-CoA ligase subunit alpha [Paracoccidioides brasiliensis Pb01] gi|226280528|gb|EEH36094.1| succinyl-CoA ligase subunit alpha [Paracoccidioides brasiliensis Pb01] Length = 331 Score = 318 bits (814), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 171/294 (58%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T +VGG +PKK G PVF Sbjct: 36 NLRINSDTKVIYQGFTGKQGTFHAQQAIEY-GTNIVGGTNPKKAGETHLGK----PVFRN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + T A AS I+VPP A +I E+I AE+PL+VCITEGIP DMVR+ L+ +S Sbjct: 91 VEEAMKETGATASAIFVPPPVAASSIEEAIRAEVPLVVCITEGIPQHDMVRITDILKTQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHQRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLK E K KP V Sbjct: 211 IGIGGDPFSGTNFIDCLKIFLKDEETDGIIMIGEIGGSAEEDAAEFLKSENK--ANKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L+ Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALEAAGVIVERSPAALGKTLL 322 >gi|226941328|ref|YP_002796402.1| succinyl-CoA synthetase subunit alpha [Laribacter hongkongensis HLHK9] gi|226716255|gb|ACO75393.1| SucD [Laribacter hongkongensis HLHK9] Length = 294 Score = 318 bits (814), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 223/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+T+VLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG + G +PVF Sbjct: 1 MSVLVNKDTRVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A T A+ASVIYVP D++IE+++A + LIV ITEG+P LDM++VK +E+S Sbjct: 56 TMKDAVRETRADASVIYVPAPFVLDSVIEAVDAGVKLIVTITEGVPTLDMLKVKRYVEES 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GARLIGPNCPGIITPGECKIGIMPGHIHKPGRIGIVSRSGTLTYEAVAQTTVLGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID L+LF D T++IVM+GEIGG+AEEEAA+F K KPIV Sbjct: 176 IGIGGDPIPGTSHIDALKLFQDDPDTDAIVMIGEIGGTAEEEAAEFAKSYV----TKPIV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA IG +++ LL Sbjct: 232 GYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIRYTRSPAEIGTTMLALL 288 >gi|303270809|ref|XP_003054766.1| predicted protein [Micromonas pusilla CCMP1545] gi|226462740|gb|EEH60018.1| predicted protein [Micromonas pusilla CCMP1545] Length = 312 Score = 318 bits (814), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 183/297 (61%), Positives = 228/297 (76%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK+TKVLVQG TGK GTFH++QAI Y T++VGG+ PKKG + G +PVF T Sbjct: 18 AVFVDKDTKVLVQGFTGKNGTFHSQQAIAY-GTRMVGGVTPKKGGSTHLG----LPVFNT 72 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 VAEAK T ANAS IYVPP A AI+E++EAE+ L+VCITEGIP DM+RVK A + +S Sbjct: 73 VAEAKTATGANASAIYVPPPFAAKAILEAVEAELDLVVCITEGIPQHDMIRVKQAMMTQS 132 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I G +G++SRSGTLTYEAV+QT+ GLGQST Sbjct: 133 KTRLIGPNCPGIIKPGECKIGIMPGYIHTPGRIGVVSRSGTLTYEAVYQTTACGLGQSTV 192 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D+ TE I+M+GEIGG+AEEEAA+F+K G KP+V Sbjct: 193 VGIGGDPFNGTNFVDCLEKFVKDDQTEGIIMIGEIGGTAEEEAAEFIKAS---GTTKPVV 249 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+I+GGKGGA DKI A+K AG+ + PSPA +G ++ ++ Sbjct: 250 SFIAGLTAPPGRRMGHAGAIIAGGKGGAGDKIAALKAAGVTVVPSPAGMGEAMHQIF 306 >gi|301774949|ref|XP_002922907.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial-like [Ailuropoda melanoleuca] Length = 586 Score = 318 bits (814), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 182/294 (61%), Positives = 226/294 (76%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QG TGK GTFH++QA+ Y TQ+VGG P KG G +PVF TV Sbjct: 290 LYVDKNTKVICQGFTGKQGTFHSQQALDY-GTQLVGGTTPGKGGQTHLG----LPVFNTV 344 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE T A ASVIYVPP A AI E++EAE+PL+VCITEGIP DMVRVK +L + Sbjct: 345 KEAKEETGATASVIYVPPPFAAAAINEAVEAEVPLVVCITEGIPQQDMVRVKHKLLRQGK 404 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 405 TRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 464 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 465 GIGGDPFNGTDFIDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKAKPVVS 524 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 525 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 578 >gi|145253767|ref|XP_001398396.1| succinyl-CoA ligase [GDP-forming] subunit alpha [Aspergillus niger CBS 513.88] gi|134083968|emb|CAK43063.1| unnamed protein product [Aspergillus niger] Length = 332 Score = 318 bits (814), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 171/295 (57%), Positives = 221/295 (74%), Gaps = 8/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH EQAI Y T+VVGG +PKK + +++ PVF Sbjct: 37 NLRINGDTKVIFQGFTGKQGTFHAEQAIAYG-TKVVGGTNPKKAGSM----HLDRPVFAN 91 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V+EA + T A A+ ++VPP A I E+IEAEIPL VCITEGIP DMVR+ L+ ++ Sbjct: 92 VSEAVKETGATATALFVPPPLAAKGIEEAIEAEIPLAVCITEGIPQHDMVRITDILKTQN 151 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 152 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 211 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLK A KP V Sbjct: 212 VGIGGDPFSGTNFIDCLKIFLEDEETDGIIMIGEIGGSAEEDAAEFLK--ANNKYNKPAV 269 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L+ Sbjct: 270 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALEAAGVVVERSPASLGKALLN 324 >gi|308272219|emb|CBX28825.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [uncultured Desulfobacterium sp.] Length = 292 Score = 318 bits (814), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 165/298 (55%), Positives = 213/298 (71%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI V+ NT+++VQG+TGK G FHT Q + Y T VV G+ P KG +VPVF Sbjct: 1 MSIFVNNNTRLVVQGVTGKEGQFHTRQCVAY-GTSVVAGVTPGKGGQKMD----DVPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T AN S+I+VPP A DAI+ES +A I LIV ITEGIPV+DM++VK + Sbjct: 56 TVNEAVKKTEANCSMIFVPPPFAADAIMESADAGIELIVVITEGIPVMDMMKVKKYISGG 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS-VGILSRSGTLTYEAVFQTSQEGLGQST 179 SR+IGPNCPGI+TP CK+GIMPG I + G +G++SRSGTLTYE V Q +Q+G+GQ+T Sbjct: 116 KSRIIGPNCPGIITPGECKVGIMPGHIHKPGGPIGVVSRSGTLTYEVVHQLTQKGIGQTT 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FID L+ F DE T+ IVMVGEIGG++EEEA++F+ + KP+ Sbjct: 176 CIGIGGDPVNGTSFIDCLDAFQKDEQTKGIVMVGEIGGTSEEEASEFI----LKNVTKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +GF+AG TAPPGR MGHAGA+ISG G A+ KI AMK++GI I + +G V + Sbjct: 232 IGFIAGITAPPGRRMGHAGAIISGKSGTAQGKIEAMKKSGIHICENLGALGEICVSVF 289 >gi|255958286|ref|NP_063932.2| succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor [Mus musculus] gi|223634732|sp|Q9WUM5|SUCA_MOUSE RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor Length = 346 Score = 318 bits (814), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 180/294 (61%), Positives = 227/294 (77%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I +DKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 IYIDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQKHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS-S 121 EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DMVRVK RL + + Sbjct: 105 KEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGT 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS + Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCI 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG AEE AA FLK+ + KP+V Sbjct: 225 GIGGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENAAAFLKEHNSGPKAKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 338 >gi|221124756|ref|XP_002160938.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 285 Score = 318 bits (814), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 175/274 (63%), Positives = 208/274 (75%), Gaps = 6/274 (2%) Query: 21 GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPP 80 GTFH +QAI Y T++VGG+ P KG + G PVF +V EAKE T +ASVIYVPP Sbjct: 1 GTFHCQQAISY-GTKIVGGVSPNKGGSVHLG----RPVFNSVKEAKENTKCDASVIYVPP 55 Query: 81 SGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS-SRLIGPNCPGILTPDSCK 139 GA AIIE+IEAE+ LIVCITEGIP DMV+VK LE+ S SRL+GPNCPGI+ P CK Sbjct: 56 PGAAAAIIEAIEAEVGLIVCITEGIPQQDMVKVKHVLERQSVSRLLGPNCPGIIKPGECK 115 Query: 140 IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL 199 IGIMPG I + G +GI+SRSGTLTYEAV QTS GLGQS VGIGGDP GT FID LE+ Sbjct: 116 IGIMPGHIHKPGCIGIVSRSGTLTYEAVHQTSTVGLGQSLCVGIGGDPFNGTNFIDCLEV 175 Query: 200 FLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGA 259 FL D T+ ++M+GEIGG+AEE AA++L KKPIVGF+AG TAPPGR MGHAGA Sbjct: 176 FLKDPETKGMIMIGEIGGAAEERAAEYLLKYNSGPNKKPIVGFIAGLTAPPGRRMGHAGA 235 Query: 260 VISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 +ISGGKGGAEDKI A++EAG+ + SPA++G +L Sbjct: 236 IISGGKGGAEDKIKALEEAGVTVTRSPAQMGTTL 269 >gi|281342263|gb|EFB17847.1| hypothetical protein PANDA_011931 [Ailuropoda melanoleuca] Length = 308 Score = 317 bits (813), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 182/295 (61%), Positives = 226/295 (76%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 + VDKNTKV+ QG TGK GTFH++QA+ Y TQ+VGG P KG G +PVF T Sbjct: 19 HLYVDKNTKVICQGFTGKQGTFHSQQALDY-GTQLVGGTTPGKGGQTHLG----LPVFNT 73 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE T A ASVIYVPP A AI E++EAE+PL+VCITEGIP DMVRVK +L + Sbjct: 74 VKEAKEETGATASVIYVPPPFAAAAINEAVEAEVPLVVCITEGIPQQDMVRVKHKLLRQG 133 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 134 KTRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 193 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 194 VGIGGDPFNGTDFIDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKAKPVV 253 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 254 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 308 >gi|83746093|ref|ZP_00943148.1| Succinyl-CoA synthetase alpha chain [Ralstonia solanacearum UW551] gi|207742411|ref|YP_002258803.1| succinyl-coa synthetase alpha chain protein [Ralstonia solanacearum IPO1609] gi|83727276|gb|EAP74399.1| Succinyl-CoA synthetase alpha chain [Ralstonia solanacearum UW551] gi|206593801|emb|CAQ60728.1| succinyl-coa synthetase alpha chain protein [Ralstonia solanacearum IPO1609] Length = 293 Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 161/301 (53%), Positives = 217/301 (72%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TV +AK +T A+ SVIYVPP+GA DAI E++EAE+ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YATVKDAKAQTGASVSVIYVPPAGAADAIWEAVEAELDLVVCITEGIPVRDMMMVKDKMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K+ S+ L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KAGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAHWIKDN----MK 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+ GI +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEACGIKTTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|300705082|ref|YP_003746685.1| succinate-CoA ligase (gdp-forming) subunit alpha, NAD(P)-binding [Ralstonia solanacearum CFBP2957] gi|299072746|emb|CBJ44099.1| Succinate-CoA ligase (GDP-forming), alpha subunit, NAD(P)-binding [Ralstonia solanacearum CFBP2957] Length = 293 Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 161/301 (53%), Positives = 217/301 (72%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TV +AK +T A+ SVIYVPP+GA DAI E++EAE+ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YATVKDAKAQTGASVSVIYVPPAGAADAIWEAVEAELDLVVCITEGIPVRDMMMVKDKMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K+ S+ L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KAGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAHWIKDN----MK 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+ GI +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEACGIKTTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|258572074|ref|XP_002544815.1| succinyl-CoA ligase alpha-chain [Uncinocarpus reesii 1704] gi|237905085|gb|EEP79486.1| succinyl-CoA ligase alpha-chain [Uncinocarpus reesii 1704] Length = 331 Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 172/293 (58%), Positives = 219/293 (74%), Gaps = 8/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ TKVL QG TGK GTFH +QAI Y T+VVGG +PKK +++ PVF T Sbjct: 36 NLRINSETKVLYQGFTGKQGTFHAQQAIDYG-TKVVGGTNPKKAGEM----HLDRPVFAT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T ANAS I+VPP A +I E+IEAE+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 91 VRDAIKETGANASAIFVPPPVAAKSIEEAIEAEMPLVVCITEGIPQHDMVRITDILKTQN 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA+F K A KP V Sbjct: 211 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAEFFK--AANKANKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 GF+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALEAAGVIVERSPAALGKTL 321 >gi|304414845|ref|ZP_07395763.1| succinyl-CoA synthetase alpha subunit (NAD(P)-binding) [Candidatus Regiella insecticola LSR1] gi|304283114|gb|EFL91528.1| succinyl-CoA synthetase alpha subunit (NAD(P)-binding) [Candidatus Regiella insecticola LSR1] Length = 270 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 161/279 (57%), Positives = 207/279 (74%), Gaps = 9/279 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKKTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTMHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ +KA+L++S Sbjct: 56 TVRDAVKETGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLVIKAKLDQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAV Q + GLGQS+ Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHAPGKVGVVSRSGTLTYEAVKQITDIGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G F+D+L+LF AD TE IVM+GEIGG+AEEEAA+++K KP++ Sbjct: 176 VGIGGDPIAGANFVDILKLFQADPQTEIIVMIGEIGGNAEEEAAEYIKKHV----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 ++AG TAP G+ MGHAGA+I+GGKG AE+ + ++ G Sbjct: 232 AYIAGVTAPAGKRMGHAGAIIAGGKGTAEENLPRWRQQG 270 >gi|225678324|gb|EEH16608.1| succinyl-CoA ligase subunit alpha [Paracoccidioides brasiliensis Pb03] Length = 331 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 171/294 (58%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T +VGG +PKK G PVF Sbjct: 36 NLRINGDTKVIYQGFTGKQGTFHAQQAIEY-GTNIVGGTNPKKAGETHLGK----PVFRN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + T A AS I+VPP A +I E+I AE+PL+VCITEGIP DMVR+ L+ +S Sbjct: 91 VEEAMKETGATASAIFVPPPVAASSIEEAIRAEVPLVVCITEGIPQHDMVRITDILKTQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHQRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLK E K KP V Sbjct: 211 IGIGGDPFSGTNFIDCLKIFLKDEETDGIIMIGEIGGSAEEDAAEFLKSENK--ANKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L+ Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALEAAGVIVERSPASLGKTLL 322 >gi|32491165|ref|NP_871419.1| hypothetical protein WGLp416 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166372|dbj|BAC24562.1| sucD [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 296 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 162/297 (54%), Positives = 217/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QGLTGK GTFH + + L T++V G+ P KG T G +PVF Sbjct: 6 MSILIDKNTKVICQGLTGKQGTFHCKLS-LEGGTKIVAGVTPGKGGTNHIG----IPVFN 60 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T ANASVIYVP D+I+ESI++ I LIVCITEGIP+ DM+ VK +L++S Sbjct: 61 TMEEAVNNTGANASVIYVPAQFCKDSILESIDSNINLIVCITEGIPISDMIFVKNKLKRS 120 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++ +IGPNCPG++TP CKIGIMP +I G++GI+SRSGTLTYEAV Q + GLGQST Sbjct: 121 NTIMIGPNCPGVITPKQCKIGIMPENIHTPGNIGIISRSGTLTYEAVKQITDVGLGQSTC 180 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G++F D+++LF DE T +I+++GEIGG +EE AA+F+K+ KKPI Sbjct: 181 VGIGGDPIIGSDFKDIIKLFNFDENTHAILIIGEIGGDSEESAAKFIKNNV----KKPIF 236 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +++G TAP G+ MGHAGA+IS G+G A KI ++K AG+ I + ++IG + E L Sbjct: 237 AYISGITAPIGKRMGHAGAIISNGQGTAISKITSLKNAGVKIIDNLSKIGLCIKENL 293 >gi|226290626|gb|EEH46110.1| succinyl-CoA ligase subunit alpha [Paracoccidioides brasiliensis Pb18] Length = 331 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 171/294 (58%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T +VGG +PKK G PVF Sbjct: 36 NLRINGDTKVIYQGFTGKQGTFHAQQAIEY-GTNIVGGTNPKKAGETHLGK----PVFRN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + T A AS I+VPP A +I E+I AE+PL+VCITEGIP DMVR+ L+ +S Sbjct: 91 VEEAMKETGATASAIFVPPPVASSSIEEAIRAEVPLVVCITEGIPQHDMVRITDILKTQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHQRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLK E K KP V Sbjct: 211 IGIGGDPFSGTNFIDCLKIFLKDEETDGIIMIGEIGGSAEEDAAEFLKSENK--ANKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L+ Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALEAAGVIVERSPASLGKTLL 322 >gi|12836764|dbj|BAB23804.1| unnamed protein product [Mus musculus] gi|15029739|gb|AAH11087.1| Succinate-CoA ligase, GDP-forming, alpha subunit [Mus musculus] gi|148666584|gb|EDK99000.1| succinate-CoA ligase, GDP-forming, alpha subunit, isoform CRA_a [Mus musculus] Length = 333 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 180/294 (61%), Positives = 227/294 (77%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I +DKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 37 IYIDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQKHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS-S 121 EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DMVRVK RL + + Sbjct: 92 KEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGT 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS + Sbjct: 152 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCI 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG AEE AA FLK+ + KP+V Sbjct: 212 GIGGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENAAAFLKEHNSGPKAKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 272 FIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 325 >gi|254523794|ref|ZP_05135849.1| succinyl-CoA synthetase alpha subunit [Stenotrophomonas sp. SKA14] gi|219721385|gb|EED39910.1| succinyl-CoA synthetase alpha subunit [Stenotrophomonas sp. SKA14] Length = 288 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 172/296 (58%), Positives = 218/296 (73%), Gaps = 11/296 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 +++KNTKV+VQG TG+ GTFH Q I Y TQVVGG+ P KG T ++++PVF TVA Sbjct: 1 MINKNTKVIVQGFTGQQGTFHATQMIEY-GTQVVGGVTPGKGGTT----HIDLPVFNTVA 55 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS--S 121 +A + T ANASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 DAVQSTGANASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRSHPD 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQST + Sbjct: 116 TVLIGPNCPGVITPGECKIGIMPGHIHQPGKIGIVSRSGTLTYEAVKQTTEVGLGQSTCI 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K+ KKP+VG Sbjct: 176 GIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKNHV----KKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ +L+ Sbjct: 232 FIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVVTVRSPGDLGAAIAKLV 287 >gi|194333247|ref|YP_002015107.1| succinyl-CoA synthetase subunit alpha [Prosthecochloris aestuarii DSM 271] gi|194311065|gb|ACF45460.1| succinyl-CoA synthetase, alpha subunit [Prosthecochloris aestuarii DSM 271] Length = 300 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 168/303 (55%), Positives = 227/303 (74%), Gaps = 10/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T+++VQG+TG GTFHT Q IL T VV G+ P KG + G + Sbjct: 1 MSVLVNKDTRLVVQGITGGEGTFHTSQ-ILEYGTNVVAGVTPGKGGLQYNGNEKDAFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPV+ TV +A E ANASVI+VP A DAI+E+ EA + +I+CITEGIPV DM++ Sbjct: 60 VPVYNTVKDAVEEAGANASVIFVPAPFAADAIMEAAEAGLKVIICITEGIPVNDMMKAYN 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + LIGPNCPG++TPD K+GIMPG I +KG++G++SRSGTLTYEAV Q + GL Sbjct: 120 YVQEKGAVLIGPNCPGVITPDEAKVGIMPGFIHKKGTIGVVSRSGTLTYEAVHQLTDVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT FID ++LF D+ TE ++M+GEIGG+AEEEAA+++ KR Sbjct: 180 GQSTCIGIGGDPIIGTRFIDAIKLFAKDDETEGLIMIGEIGGTAEEEAAEYI----KRHF 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG A++KI AM+ AGI + +PA IG ++++ Sbjct: 236 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTADEKIKAMERAGIHVVENPADIGDAMLK 295 Query: 296 LLG 298 LG Sbjct: 296 ALG 298 >gi|21232523|ref|NP_638440.1| succinyl-CoA synthetase subunit alpha [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767392|ref|YP_242154.1| succinyl-CoA synthetase subunit alpha [Xanthomonas campestris pv. campestris str. 8004] gi|188990493|ref|YP_001902503.1| succinyl-CoA synthetase subunit alpha [Xanthomonas campestris pv. campestris str. B100] gi|21114314|gb|AAM42364.1| succinyl-CoA synthetase alpha subunit [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572724|gb|AAY48134.1| succinyl-CoA synthetase alpha subunit [Xanthomonas campestris pv. campestris str. 8004] gi|167732253|emb|CAP50445.1| succinate-CoA ligase (ADP-forming) alpha subunit [Xanthomonas campestris pv. campestris] Length = 291 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 174/299 (58%), Positives = 219/299 (73%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q I Y TQVVGG+ P KG T ++++PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMIEY-GTQVVGGVTPGKGGTT----HIDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVQSTGADASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HPDTVLIGPNCPGVITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKQFV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L+ Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAALV 290 >gi|319786170|ref|YP_004145645.1| succinyl-CoA synthetase, subunit alpha [Pseudoxanthomonas suwonensis 11-1] gi|317464682|gb|ADV26414.1| succinyl-CoA synthetase, alpha subunit [Pseudoxanthomonas suwonensis 11-1] Length = 291 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 174/299 (58%), Positives = 218/299 (72%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q I Y TQVVGG+ P KG T ++ +PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMIEY-GTQVVGGVTPGKGGTT----HLELPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L ++ Sbjct: 56 TVAEAVQSTGADASVIYVPPPFAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRT 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + L+GPNCPGI+TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 YPETVLVGPNCPGIITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++ KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIAKHV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ EL+ Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAELV 290 >gi|299067883|emb|CBJ39096.1| Succinate-CoA ligase (GDP-forming), alpha subunit, NAD(P)-binding [Ralstonia solanacearum CMR15] Length = 293 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 160/301 (53%), Positives = 216/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +AK +T A SVIYVPP+GA DAI E++EAE+ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YASVKDAKAQTGATVSVIYVPPAGAADAIWEAVEAELDLVVCITEGIPVRDMMMVKDKMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K+ S+ L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KAGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAHWIKDN----MK 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+ GI +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEACGIKTTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|241662077|ref|YP_002980437.1| succinyl-CoA synthetase subunit alpha [Ralstonia pickettii 12D] gi|240864104|gb|ACS61765.1| succinyl-CoA synthetase, alpha subunit [Ralstonia pickettii 12D] Length = 293 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 161/301 (53%), Positives = 217/301 (72%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TV +AK +T A SVIYVPP+GA +AI E++EAE+ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YATVKDAKAQTGATVSVIYVPPAGAANAIWEAVEAELDLVVCITEGIPVRDMMMVKDKMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K+ S+ L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KAGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAYWIKDN----MK 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+E GI +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEECGIKTTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|322708227|gb|EFY99804.1| succinyl-CoA ligase alpha-chain [Metarhizium anisopliae ARSEF 23] Length = 332 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 170/296 (57%), Positives = 224/296 (75%), Gaps = 8/296 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFT 60 ++ ++ +TKV+ QG TGK GTFH QAI Y T+VVGG +PKK GST+ +++PVF Sbjct: 35 NLRINGDTKVIFQGFTGKQGTFHARQAIEYG-TKVVGGTNPKKAGSTH-----LDLPVFK 88 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 V+EA + T A A+ ++VPP A I E+++AEIPL+VCITEGIP DMVR+ + L+ + Sbjct: 89 NVSEAVKETGATATALFVPPPVAAAGIEEALQAEIPLVVCITEGIPQHDMVRITSMLKSQ 148 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 149 SKTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSL 208 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT FID L++F DE T+ I+M+GEIGGSAEEEAA+FLK G KP+ Sbjct: 209 VVGIGGDPFSGTNFIDCLKVFTEDEDTDGIIMIGEIGGSAEEEAAEFLKQANTVGGGKPV 268 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 V F+AG +APPGR MGHAGA+++GGKGGA+ KI A++ AG+ + SPA +G++L + Sbjct: 269 VSFIAGISAPPGRRMGHAGAIVAGGKGGADSKIKALEAAGVIVERSPAGLGKALYD 324 >gi|298505175|gb|ADI83898.1| succinyl-CoA synthetase, alpha subunit [Geobacter sulfurreducens KN400] Length = 291 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 165/298 (55%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ ++K++VQG+TG++G FHT+Q Y T++V G+ P KG + G +PVF Sbjct: 1 MSILINSDSKIVVQGITGRSGLFHTQQCRDY-GTKIVAGVTPGKGGIHIEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA T AN S+I+VPP A DAI+E+ +A + L VCITEGIPV DMV VK L++S Sbjct: 56 SVEEAVRYTGANVSMIFVPPPAAADAILEAADAGLELAVCITEGIPVRDMVPVKRILQES 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CK+GIMPG I + G +G++SRSGTLTYEAV Q ++ GLGQST Sbjct: 116 RTRLVGPNCPGVITPGECKVGIMPGYIHKPGKIGVVSRSGTLTYEAVKQITEAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G FIDVL+LF D+ TE++ M+GEIGG+AEEEAA ++K+ KKP+ Sbjct: 176 VGIGGDPIIGMNFIDVLKLFNEDKNTEAVFMIGEIGGTAEEEAAYWIKENM----KKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPG+ MGHAGA+I+GGKG AEDKI + E G+ +A SP ++G +++E LG Sbjct: 232 SFIAGVTAPPGKRMGHAGAIITGGKGKAEDKIRTLSECGVVVATSPTKMGVAMLEALG 289 >gi|78187602|ref|YP_375645.1| succinyl-CoA ligase, alpha subunit [Chlorobium luteolum DSM 273] gi|78167504|gb|ABB24602.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Chlorobium luteolum DSM 273] Length = 299 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 168/303 (55%), Positives = 230/303 (75%), Gaps = 10/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T+++VQG+TG GTFHT Q IL T VV G+ P KG + G + + Sbjct: 1 MSVLVNKDTRLVVQGITGGEGTFHTSQ-ILEYGTNVVAGVTPGKGGVLYHGNDRDKFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV +A E+ ANA+VI+VP + A DAI+E+ +A + +I+CITEGIPV DM++ A Sbjct: 60 VPVFNTVKDAVEKAEANATVIFVPAAFAADAIMEAADAGLKVIICITEGIPVNDMMKAYA 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + L+GPNCPG++TP KIGIMPG I +KG++G++SRSGTLTYEAV Q + GL Sbjct: 120 FVQEKGAVLVGPNCPGVITPGEAKIGIMPGFIHKKGTIGVVSRSGTLTYEAVHQLTSVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT FID ++LF D+ TE ++M+GEIGGSAEEEAA+++ ++ Sbjct: 180 GQSTCIGIGGDPIIGTRFIDAVKLFAKDDETEGLIMIGEIGGSAEEEAAEYI----RKYF 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG AE+KI AM+ AGI + SPA IG ++++ Sbjct: 236 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAEEKIKAMEAAGIHVVDSPADIGEAMLK 295 Query: 296 LLG 298 LG Sbjct: 296 ALG 298 >gi|219849684|ref|YP_002464117.1| succinyl-CoA synthetase subunit alpha [Chloroflexus aggregans DSM 9485] gi|219543943|gb|ACL25681.1| succinyl-CoA synthetase, alpha subunit [Chloroflexus aggregans DSM 9485] Length = 296 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 169/299 (56%), Positives = 215/299 (71%), Gaps = 7/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NT++LVQG+TGK G FHT Q + Y T+VV G+ P +G G V PVF Sbjct: 1 MSILIDANTRLLVQGITGKEGEFHTRQMLDY-GTKVVAGVVPGRGGQMAIDGRV--PVFN 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA T AN +VIYVP A DAI ES A IPLIVCITEGIP LDMV A +++ Sbjct: 58 TVSEAVAATGANTAVIYVPAPFAPDAIRESAAARIPLIVCITEGIPALDMVSTYAFVQEC 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG+LTP + K+GI+PG+I G VGI+S+SGTLTYEAV ++ G+GQST Sbjct: 118 GVRLIGPNCPGLLTPGAAKVGIIPGNIAMPGPVGIVSKSGTLTYEAVDALTRIGIGQSTI 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVL +F AD TE+IV++GEIGG+AE+EAA ++K KP+V Sbjct: 178 VGIGGDPIIGTNFIDVLAMFEADPQTEAIVLIGEIGGTAEQEAAAYIKAHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPG+ MGHAGA+ISGG+G A++KI A++ G+ +A P I + E L + Sbjct: 234 GFIAGQTAPPGKRMGHAGAIISGGEGTAQEKIAALESVGVRVARMPTDIAGLVKEALAT 292 >gi|39996161|ref|NP_952112.1| succinyl-CoA synthase subunit alpha [Geobacter sulfurreducens PCA] gi|39982926|gb|AAR34385.1| succinyl-CoA synthase, alpha subunit [Geobacter sulfurreducens PCA] Length = 291 Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 165/298 (55%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ ++K++VQG+TG++G FHT+Q Y T++V G+ P KG + G +PVF Sbjct: 1 MSILINSDSKIVVQGITGRSGLFHTQQCRDY-GTRIVAGVTPGKGGIHIEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA T AN S+I+VPP A DAI+E+ +A + L VCITEGIPV DMV VK L++S Sbjct: 56 SVEEAVRYTGANVSMIFVPPPAAADAILEAADAGLELAVCITEGIPVRDMVPVKRILQES 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CK+GIMPG I + G +G++SRSGTLTYEAV Q ++ GLGQST Sbjct: 116 RTRLVGPNCPGVITPGECKVGIMPGYIHKPGKIGVVSRSGTLTYEAVKQITEAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G FIDVL+LF D+ TE++ M+GEIGG+AEEEAA ++K+ KKP+ Sbjct: 176 VGIGGDPIIGMNFIDVLKLFNEDKNTEAVFMIGEIGGTAEEEAAYWIKENM----KKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPG+ MGHAGA+I+GGKG AEDKI + E G+ +A SP ++G +++E LG Sbjct: 232 SFIAGVTAPPGKRMGHAGAIITGGKGKAEDKIRTLSECGVVVATSPTKMGVAMLEALG 289 >gi|297266410|ref|XP_001082705.2| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Macaca mulatta] Length = 382 Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 179/295 (60%), Positives = 227/295 (76%), Gaps = 6/295 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 61 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 115 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E++EAEIPL+VCITEGIP DMVRVK +L + Sbjct: 116 KEAKEQTGATASVIYVPPPFAAAAINEAVEAEIPLVVCITEGIPQQDMVRVKHKLLRQGK 175 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT++ GLGQS V Sbjct: 176 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTEVGLGQSLCV 235 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 236 GIGGDPFNGTDFIDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 295 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ ++ Sbjct: 296 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKV 350 >gi|296420574|ref|XP_002839844.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636050|emb|CAZ84035.1| unnamed protein product [Tuber melanosporum] Length = 326 Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 170/295 (57%), Positives = 222/295 (75%), Gaps = 8/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L++ +TKV+ QG TGK GTFH +QAI Y T VVGGI P+K + +++ PVF T Sbjct: 31 NLLINADTKVIFQGFTGKQGTFHAQQAIEYG-TNVVGGISPRKAGSQ----HLDRPVFGT 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + A+AS I+VPP A +I E+IEAEI L+VCITEGIP DMVRV L+ ++ Sbjct: 86 VKDAISKVGADASAIFVPPPVAAKSIEEAIEAEIKLVVCITEGIPQNDMVRVVDMLKTQN 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI++P CKIGIMPG I ++G +G++SRSGTLTYEAV QT+Q GLGQS Sbjct: 146 KTRLVGPNCPGIISPGQCKIGIMPGFIHKRGRIGVVSRSGTLTYEAVNQTTQVGLGQSLV 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT F D L +FL D+ T+ I+M+GEIGGSAEE+AA +LK A + KPIV Sbjct: 206 IGIGGDPFSGTSFTDALSVFLGDDETDGIIMIGEIGGSAEEDAADYLK--ANNPKNKPIV 263 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG +APPGR MGHAGA++SGGKGGAE KI+A+++AG + SPA +G+SL E Sbjct: 264 SFIAGISAPPGRRMGHAGAIVSGGKGGAESKISALEDAGAIVERSPASLGKSLYE 318 >gi|207728010|ref|YP_002256404.1| succinyl-coa synthetase alpha chain protein [Ralstonia solanacearum MolK2] gi|206591254|emb|CAQ56866.1| succinyl-coa synthetase alpha chain protein [Ralstonia solanacearum MolK2] Length = 293 Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 161/301 (53%), Positives = 216/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TV +AK +T A+ SVIYVPP+GA DAI E++EAE+ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YATVKDAKAQTGASVSVIYVPPAGAADAIWEAVEAELDLVVCITEGIPVRDMMMVKDKMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K S+ L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KVGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAHWIKDN----MK 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+ GI +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEACGIKTTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|289662935|ref|ZP_06484516.1| succinyl-CoA synthetase subunit alpha [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667063|ref|ZP_06488138.1| succinyl-CoA synthetase subunit alpha [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 291 Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 173/299 (57%), Positives = 219/299 (73%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG T ++++PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGTT----HIDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVKATGADASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HPDTVLIGPNCPGVITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKQYV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L+ Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAALV 290 >gi|34496531|ref|NP_900746.1| succinyl-CoA synthetase subunit alpha [Chromobacterium violaceum ATCC 12472] gi|34102385|gb|AAQ58751.1| succinyl-CoA synthetase alpha chain [Chromobacterium violaceum ATCC 12472] Length = 294 Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 174/299 (58%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKVLVQG TGK GTFH EQA L T+VVGG+ P KG + G +PVF Sbjct: 1 MSVLVNKDTKVLVQGFTGKNGTFHAEQA-LKVGTKVVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A +T A+ASVIYVP + A D+I+E++++ + LIVCITEG+P LDM+ VK ++++ Sbjct: 56 TMKDAVRQTQADASVIYVPAAFAKDSILEAVDSGVKLIVCITEGVPTLDMLYVKKAVDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+TP CKIGIMP I G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRLIGPNCPGIITPGECKIGIMPWHIHNPGRIGIVSRSGTLTYEAVAQTTALGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID L LF D T++IVM+GEIGG+AEEEAA+F K KP+V Sbjct: 176 IGIGGDPIPGTSHIDALRLFQDDPDTDAIVMIGEIGGTAEEEAAEFAKAYV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA IG+++ +LL S Sbjct: 232 GYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFKAFEKAGIAYTRSPAEIGKTMFDLLKS 290 >gi|146089165|ref|XP_001466253.1| succinyl-CoA synthetase alpha subunit [Leishmania infantum JPCM5] gi|134070355|emb|CAM68692.1| putative succinyl-CoA synthetase alpha subunit [Leishmania infantum JPCM5] gi|321398364|emb|CBZ08768.1| putative succinyl-CoA synthetase alpha subunit [Leishmania infantum JPCM5] gi|322499778|emb|CBZ34852.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 299 Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 173/296 (58%), Positives = 220/296 (74%), Gaps = 9/296 (3%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 V+K+TKV+VQG+TGKAGTFHT++A+ Y T+VVGG+ PKK T G VPVF T AE Sbjct: 11 VNKDTKVIVQGMTGKAGTFHTKEAMAY-GTKVVGGVSPKKAGTTALG----VPVFATAAE 65 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSR 123 A + T A ASV+YVP +I E+++AE+PL+V ITEGIP DM+RVK+ L ++ +R Sbjct: 66 AVKATGATASVLYVPAPSCAASIEEALDAELPLVVVITEGIPQWDMLRVKSMLLSQNKTR 125 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 LIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ EGLGQS VGI Sbjct: 126 LIGPNCPGIIKPAECKIGIMPGHIHQKGKIGIVSRSGTLTYEAVAQTTAEGLGQSLCVGI 185 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDP GT +D L LFL D TE I+++GEIGG+AEEEAA F+K+ KKPIV F+ Sbjct: 186 GGDPFNGTNMVDCLRLFLNDPETEGIILIGEIGGTAEEEAADFIKNSP---IKKPIVSFI 242 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G TAPPGR MGHAGA++SGG G A+ K +A++ AG+ I+ SPA +G+ + EL + Sbjct: 243 GGATAPPGRRMGHAGAIVSGGMGTAKGKKDALRAAGVTISDSPAHLGKHMAELFAT 298 >gi|330959052|gb|EGH59312.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. maculicola str. ES4326] Length = 269 Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 163/278 (58%), Positives = 205/278 (73%), Gaps = 9/278 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T ++N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVETTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVILIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEA 278 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++A Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDA 269 >gi|213404008|ref|XP_002172776.1| succinyl-CoA ligase subunit alpha [Schizosaccharomyces japonicus yFS275] gi|212000823|gb|EEB06483.1| succinyl-CoA ligase subunit alpha [Schizosaccharomyces japonicus yFS275] Length = 315 Score = 316 bits (809), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 172/298 (57%), Positives = 219/298 (73%), Gaps = 7/298 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++++ +TKVL QG TGK GTFH +QAI Y TQVVGG +PKK T G PVF Sbjct: 20 NLMISSSTKVLFQGFTGKQGTFHAQQAIDYG-TQVVGGTNPKKAGTTHLG----RPVFAD 74 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 +AEA + T A+AS I+VPP+ A AI E+IEAE+PL+V ITEGIP DM+R+ L+ +S Sbjct: 75 IAEAMKETKADASAIFVPPAFAAGAIAEAIEAEVPLVVAITEGIPQHDMLRISDMLKTQS 134 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMP I G +GI+SRSGTLTYEAV QT+Q LGQS Sbjct: 135 KTRLVGPNCPGVIRPGQCKIGIMPSHIHMPGRIGIISRSGTLTYEAVNQTTQTKLGQSLV 194 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKPI 239 +GIGGDP GT FID LELFL D T+ ++M+GEIGGSAEEEAA++LK+ R + KP+ Sbjct: 195 IGIGGDPFPGTNFIDGLELFLNDPNTDGVIMIGEIGGSAEEEAAEYLKNHNLTREKPKPV 254 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V F+AG TAPPGR MGHAGA+++GGKGGA DK+ A++ AG+ A SPA +G+ + E L Sbjct: 255 VSFIAGVTAPPGRRMGHAGAIVAGGKGGAMDKLLALEAAGVRTARSPAILGKLICEEL 312 >gi|193213404|ref|YP_001999357.1| succinyl-CoA synthetase subunit alpha [Chlorobaculum parvum NCIB 8327] gi|193086881|gb|ACF12157.1| succinyl-CoA synthetase, alpha subunit [Chlorobaculum parvum NCIB 8327] Length = 300 Score = 316 bits (809), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 167/303 (55%), Positives = 231/303 (76%), Gaps = 10/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T+++VQG+TG GTFHT Q IL T VV G+ P KG + G + Sbjct: 1 MSVLVNKDTRLVVQGITGGEGTFHTSQ-ILEYGTNVVAGVTPGKGGILYNGNEKDQFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV EA E+ ANA+VI+VP + A DAI+E+ +A + +I+CITEGIPV DM++ + Sbjct: 60 VPVFDTVREAVEKAEANATVIFVPAAFAADAIMEAADAGLKVIICITEGIPVNDMMKAYS 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + L+GPNCPG++TP K+GIMPG I +KGS+G++SRSGTLTYEAV Q ++ GL Sbjct: 120 FVQEKGAVLVGPNCPGVITPGEAKVGIMPGFIHKKGSIGVVSRSGTLTYEAVHQLTEVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT FID +++F D+ TE ++M+GEIGGSAEEEAA+++ K+ Sbjct: 180 GQSTCIGIGGDPIIGTRFIDAVKMFAKDDDTEGLIMIGEIGGSAEEEAAEYI----KKYF 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG AE+KI AM+ AGI + +PA IG+++++ Sbjct: 236 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAEEKIKAMEAAGIKVVENPADIGQAMLK 295 Query: 296 LLG 298 LG Sbjct: 296 ALG 298 >gi|57238882|ref|YP_180018.1| succinyl-CoA synthetase alpha chain [Ehrlichia ruminantium str. Welgevonden] gi|58578811|ref|YP_197023.1| succinyl-CoA synthetase alpha chain [Ehrlichia ruminantium str. Welgevonden] gi|58616870|ref|YP_196069.1| succinyl-CoA synthetase alpha chain [Ehrlichia ruminantium str. Gardel] gi|57160961|emb|CAH57867.1| succinyl-CoA synthetase, alpha subunit [Ehrlichia ruminantium str. Welgevonden] gi|58416482|emb|CAI27595.1| Succinyl-CoA synthetase alpha chain [Ehrlichia ruminantium str. Gardel] gi|58417437|emb|CAI26641.1| Succinyl-CoA synthetase alpha chain [Ehrlichia ruminantium str. Welgevonden] Length = 295 Score = 315 bits (808), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 187/300 (62%), Positives = 228/300 (76%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+ NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG TY ++N+PVF Sbjct: 1 MSILVNSNTKVICQGFTGAHGTFHSEQAIAY-GTKMVGGVTPGKGGTY----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +AK + ANA+VIYVP A DAI+E+IEAEI LI+CITEGIP LDMV+VK L S Sbjct: 56 TVKQAKLQVGANATVIYVPAPYAADAILEAIEAEIELIICITEGIPTLDMVQVKRALCNS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPGI+TP+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQST Sbjct: 116 KSILIGPNCPGIITPEECKIGIMPGYIHKRGHIGVISRSGTLTYEAVAQTTEAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G F D L+LF+ D T I+M+GEIGGS EEEAA+F+K G KPIV Sbjct: 176 IGIGGDPIHGMSFTDCLKLFINDPDTHGIIMIGEIGGSEEEEAAEFIK---LSGTTKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GFVAGKTAPPGR MGHAGA+ SG G AE KI MK AGI IA +PA IG+++ E + ++ Sbjct: 233 GFVAGKTAPPGRRMGHAGAISSGSSGSAESKIQIMKSAGIIIAETPAVIGKTMFEAMSNI 292 >gi|169624256|ref|XP_001805534.1| hypothetical protein SNOG_15384 [Phaeosphaeria nodorum SN15] gi|111056197|gb|EAT77317.1| hypothetical protein SNOG_15384 [Phaeosphaeria nodorum SN15] Length = 328 Score = 315 bits (808), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 172/295 (58%), Positives = 218/295 (73%), Gaps = 8/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKVL QG TGK GTFH +QAI Y T+VVGG +PKK + G PVF + Sbjct: 33 NLRINGDTKVLFQGFTGKQGTFHAQQAIEYG-TKVVGGTNPKKAGSEHLGK----PVFAS 87 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VA+A + T A AS I+VPP A +I E+I AE+PLIV ITEGIP DMVR+ L+ ++ Sbjct: 88 VADAIKETGATASAIFVPPPVAAKSIEEAIAAEVPLIVTITEGIPQHDMVRITDMLKSQN 147 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR++GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 148 KSRMVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 207 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA FLK+ KP+V Sbjct: 208 VGIGGDPFSGTNFIDCLKVFLQDEETDGIIMIGEIGGSAEEDAADFLKE--YNTANKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG +APPGR MGHAGA++SGGKG A KINA++ AG+ + SPAR+G +L + Sbjct: 266 SFIAGISAPPGRRMGHAGAIVSGGKGDANSKINALEAAGVVVERSPARLGSTLYD 320 >gi|186524998|ref|NP_001119263.1| succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative [Arabidopsis thaliana] gi|332005759|gb|AED93142.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-2 [Arabidopsis thaliana] Length = 297 Score = 315 bits (808), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 165/258 (63%), Positives = 193/258 (74%), Gaps = 9/258 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++V G+ PKKG T G +PVF T Sbjct: 46 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVAGVTPKKGGTEHLG----LPVFNT 100 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEAK T ANASVIYVP A AI+E + AE+ LIVCITEGIP DMVRVKA L +S Sbjct: 101 VAEAKAETKANASVIYVPAPFAAAAIMEGLAAELDLIVCITEGIPQHDMVRVKAALNSQS 160 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 161 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTC 220 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F D TE IV++GEIGG+AEE+AA +K+ G KP+V Sbjct: 221 VGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIKE---NGTDKPVV 277 Query: 241 GFVAGKTAPPGRTMGHAG 258 F+AG TAPPGR MGHAG Sbjct: 278 AFIAGLTAPPGRRMGHAG 295 >gi|85103754|ref|XP_961593.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Neurospora crassa OR74A] gi|74665374|sp|Q9P727|SUCA_NEUCR RecName: Full=Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor gi|7635789|emb|CAB88555.1| probable atp-specific succinyl-coa synthetase alpha subunit [Neurospora crassa] gi|28923140|gb|EAA32357.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Neurospora crassa OR74A] Length = 333 Score = 315 bits (807), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 170/294 (57%), Positives = 221/294 (75%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFT 60 ++ ++ +TKVL QG TGK GTFH +QAI Y T VVGG +PKK G T+ ++ PVF+ Sbjct: 36 NLKINGDTKVLFQGFTGKQGTFHAQQAIEYG-TNVVGGTNPKKAGQTH-----LDRPVFS 89 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 V+EA + T A A+ I+VPP A I E+++AEIPL VCITEGIP DMVR+ + L+ + Sbjct: 90 NVSEAVKETGATATAIFVPPPLAAAGIEEALQAEIPLAVCITEGIPQHDMVRITSMLKTQ 149 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 150 SKTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSL 209 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT FID L++FL D T+ I+M+GEIGGSAEEEAA FLK+ + KP+ Sbjct: 210 VVGIGGDPFSGTNFIDCLKVFLEDGDTDGIIMIGEIGGSAEEEAADFLKEYNTKNGGKPV 269 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 V F+AG +APPGR MGHAGA+++GGKGGA+ KI A++ AG+ + SPA +G++L Sbjct: 270 VSFIAGISAPPGRRMGHAGAIVAGGKGGADSKIKALEAAGVVVERSPASLGKAL 323 >gi|323451150|gb|EGB07028.1| hypothetical protein AURANDRAFT_28269 [Aureococcus anophagefferens] Length = 310 Score = 315 bits (807), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 174/296 (58%), Positives = 218/296 (73%), Gaps = 8/296 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + ++K TKV+ QG TGK GTFH+EQA+ Y T VVGG+ PKKG G +PVF TV Sbjct: 11 VWINKETKVICQGFTGKQGTFHSEQALAY-GTNVVGGVTPKKGGQEHLG----LPVFDTV 65 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 +AK+ +AS+IYVPP AI+++IEAEIPL+V ITEG+P DMV VK L +S+ Sbjct: 66 MDAKKAVNPDASMIYVPPPFCKAAIMDAIEAEIPLVVAITEGVPQQDMVEVKYHLTRQSA 125 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I +KG +G++SRSGTLTYEAV QT+ GLGQST V Sbjct: 126 TRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGVVSRSGTLTYEAVHQTTVTGLGQSTCV 185 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE F D TE I+M+GEIGGSAEEEAA++LK A KP+VG Sbjct: 186 GIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAAEWLK--AHGDPDKPVVG 243 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA++SGGKG A K A ++AG+ I+ SPA++G ++++ Sbjct: 244 FIAGTTAPPGRRMGHAGAIVSGGKGTAAAKFAAFEDAGVFISRSPAQLGSTMIQAF 299 >gi|289548927|ref|YP_003473915.1| succinyl-CoA synthetase subunit alpha [Thermocrinis albus DSM 14484] gi|289182544|gb|ADC89788.1| succinyl-CoA synthetase, alpha subunit [Thermocrinis albus DSM 14484] Length = 295 Score = 315 bits (807), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 168/302 (55%), Positives = 226/302 (74%), Gaps = 11/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+KNT+V+VQG+TGK G+FH Q Y TQVV G+ P KG ++PVF Sbjct: 1 MAILVNKNTRVVVQGITGKEGSFHALQCKAY-GTQVVAGVTPGKGGQKVE----DIPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T AN S+I+VPP+ A DAI+E+++A I L+VCITEGIPV DM+ VK + K+ Sbjct: 56 TVDEAVKETQANCSLIFVPPAFAADAIVEALDAGIELVVCITEGIPVRDMLMVKHYMLKN 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +++LIGPNCPG++TP K+GIMPG IF +GSVGI+SRSGTLTYEA +Q ++ G+GQS Sbjct: 116 YPNAKLIGPNCPGVITPGEAKVGIMPGHIFTRGSVGIVSRSGTLTYEAAYQLTKMGIGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV G DV+ LF D T++I+M+GEIGG+AEEEAA+++ KKP Sbjct: 176 TAVGIGGDPVHGLSHKDVIALFNEDPETQAILMIGEIGGTAEEEAAEYIASYV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + ++AG TAPPGR MGHAGA+ISGGKG A+ K+ A++EAG+ + +PA IG+++ E+LG Sbjct: 232 VFAYIAGITAPPGRRMGHAGAIISGGKGTAQAKMEALREAGVHVIENPAFIGKTVAEVLG 291 Query: 299 SL 300 + Sbjct: 292 GV 293 >gi|90076498|dbj|BAE87929.1| unnamed protein product [Macaca fascicularis] Length = 346 Score = 315 bits (807), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 179/294 (60%), Positives = 226/294 (76%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E++EAEIPL+VCITEGIP DMVRVK +L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAINEAVEAEIPLVVCITEGIPQQDMVRVKHKLLRQGK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT++ GLGQS V Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTEVGLGQSLCV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 225 GIGGDPFNGTDFIDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 338 >gi|299139180|ref|ZP_07032356.1| succinyl-CoA synthetase, alpha subunit [Acidobacterium sp. MP5ACTX8] gi|298598860|gb|EFI55022.1| succinyl-CoA synthetase, alpha subunit [Acidobacterium sp. MP5ACTX8] Length = 291 Score = 315 bits (807), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 178/298 (59%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNT+++VQG+TG+ GTFH + Y T+VVGG+ P KG T G PVF Sbjct: 1 MSVLVDKNTRLIVQGITGREGTFHAKGCAEY-GTKVVGGVTPGKGGTTHEG----WPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T ANA+VI+VPP A D I+E+ A +PL+VCITEGIPVLDMV+V ++ S Sbjct: 56 TVEEAVKETGANATVIFVPPPAAADGILEATAAGVPLVVCITEGIPVLDMVKVWEVVKTS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+++P KIGIMPG I ++GSVGI+S+SGTLTYEAV+Q +Q G+GQSTA Sbjct: 116 KSRLIGPNCPGVISPGKAKIGIMPGRIHKEGSVGIVSKSGTLTYEAVYQLTQRGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID L L D TE+I+M+GEIGGSAEE AA+F+K KKP+V Sbjct: 176 IGIGGDPIIGTTHIDALRLLNDDPETEAIIMIGEIGGSAEEAAAEFIKQHV----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+ISGG+G A K+ AM AGI + SPA IG ++ LLG Sbjct: 232 GFIAGQTAPPGRRMGHAGAIISGGEGTAASKMAAMSAAGITVVKSPAEIGDAMARLLG 289 >gi|156743668|ref|YP_001433797.1| succinyl-CoA synthetase subunit alpha [Roseiflexus castenholzii DSM 13941] gi|156234996|gb|ABU59779.1| succinyl-CoA synthetase, alpha subunit [Roseiflexus castenholzii DSM 13941] Length = 290 Score = 315 bits (807), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 165/297 (55%), Positives = 217/297 (73%), Gaps = 7/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNT++LVQG+TG+ G FHT Q I Y T VV G+ P +G G V PVF Sbjct: 1 MSILVDKNTRLLVQGITGREGEFHTRQMIAYG-TNVVAGVTPGRGGQTAIDGRV--PVFN 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA ++T AN SVIYVP + A DA+ E+ A IPLIVCITEGIP DMV A + + Sbjct: 58 TVAEAVKQTGANVSVIYVPAAFAPDAMREAAAAGIPLIVCITEGIPANDMVATYAFIREH 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG+LTP K+GI+PG+I G VG++S+SGTLTYEAV ++ GLGQ+T Sbjct: 118 GARLIGPNCPGLLTPAQAKVGIIPGNIASPGPVGVVSKSGTLTYEAVDALTRIGLGQTTI 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F+DVLE+F AD TE+IV++GEIGG+AE +AA++++ KP+V Sbjct: 178 VGIGGDPIIGTSFVDVLEMFQADPETEAIVLIGEIGGAAEIDAARYIQAHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA+I+GG+G A++KI A++ G+ +A P I + + E + Sbjct: 234 GFIAGQTAPPGKRMGHAGAIITGGEGTAQEKIAALEAVGVRVARLPTDIAQLVKESM 290 >gi|12832967|dbj|BAB22331.1| unnamed protein product [Mus musculus] Length = 333 Score = 315 bits (807), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 179/294 (60%), Positives = 226/294 (76%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I +DKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 37 IYIDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQKHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS-S 121 EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DMVRVK RL + + Sbjct: 92 KEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGT 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMP I +KG +GI+SRSGTLTYEAV QT+Q GLGQS + Sbjct: 152 TRLIGPNCPGVINPGECKIGIMPAHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCI 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG AEE AA FLK+ + KP+V Sbjct: 212 GIGGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENAAAFLKEHNSGPKAKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 272 FIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 325 >gi|39941136|ref|XP_360105.1| hypothetical protein MGG_05480 [Magnaporthe oryzae 70-15] gi|145022137|gb|EDK06157.1| hypothetical protein MGG_05480 [Magnaporthe oryzae 70-15] Length = 333 Score = 315 bits (807), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 169/294 (57%), Positives = 221/294 (75%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFT 60 ++ ++ +TKVL QG TGK GTFH +QAI Y TQVVGG +PKK G T+ +++PVF Sbjct: 36 NLRINSDTKVLFQGFTGKQGTFHAQQAIDYG-TQVVGGTNPKKAGQTH-----LDLPVFA 89 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 VA+ ++T ANA+ I+VPP A I E++ AE+PL+VCITEGIP DMVR+ + L+ + Sbjct: 90 NVADGVKQTGANATAIFVPPPLAAAGIEEAVAAEVPLVVCITEGIPQHDMVRITSILKSQ 149 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 150 NKTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSL 209 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT FID L++FL D T+ I+M+GEIGGSAEEEAA FL+ KP+ Sbjct: 210 VVGIGGDPFSGTNFIDCLKVFLQDGETDGIIMIGEIGGSAEEEAADFLRANNTVNGGKPV 269 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 V F+AG +AP GR MGHAGA++SGGKGGA+ KI A++ AG+ + PSPA +G++L Sbjct: 270 VSFIAGISAPAGRRMGHAGAIVSGGKGGADSKIKALEAAGVIVEPSPAGLGKAL 323 >gi|322492513|emb|CBZ27788.1| putative succinyl-CoA synthetase alpha subunit [Leishmania mexicana MHOM/GT/2001/U1103] Length = 299 Score = 315 bits (806), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 172/296 (58%), Positives = 219/296 (73%), Gaps = 9/296 (3%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 V+K+TKV+VQG+TGKAGTFHT++A+ Y T+VVGG+ PKK T G VPVF T AE Sbjct: 11 VNKDTKVIVQGMTGKAGTFHTKEAMAY-GTKVVGGVSPKKAGTTALG----VPVFATAAE 65 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSR 123 A + T A ASV+YVP +I E+++AE+PL+V ITEGIP DM+RVK+ L ++ +R Sbjct: 66 AVKATGATASVLYVPAPSCAASIEEALDAELPLVVVITEGIPQWDMLRVKSMLLSQNKTR 125 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 LIGPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ EGLGQS VGI Sbjct: 126 LIGPNCPGIIKPAECKIGIMPGHIHKRGKIGIVSRSGTLTYEAVAQTTAEGLGQSLCVGI 185 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDP GT +D L LFL D TE I+++GEIGG+AEEEAA F+K+ KKPIV F+ Sbjct: 186 GGDPFNGTNMVDCLRLFLNDPETEGIILIGEIGGTAEEEAADFIKNSPI---KKPIVSFI 242 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G TAPPGR MGHAGA++SGG G A+ K A++ AG+ I+ SPA +G+ + EL + Sbjct: 243 GGATAPPGRRMGHAGAIVSGGMGTAKGKKEALRAAGVTISDSPAHLGKHMAELFST 298 >gi|322492514|emb|CBZ27789.1| putative succinyl-CoA synthetase alpha subunit [Leishmania mexicana MHOM/GT/2001/U1103] Length = 299 Score = 315 bits (806), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 172/296 (58%), Positives = 219/296 (73%), Gaps = 9/296 (3%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 V+K+TKV+VQG+TGKAGTFHT++A+ Y T+VVGG+ PKK T G VPVF T AE Sbjct: 11 VNKDTKVIVQGMTGKAGTFHTKEAMAY-GTKVVGGVSPKKAGTTALG----VPVFATAAE 65 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSR 123 A + T A ASV+YVP +I E+++AE+PL+V ITEGIP DM+RVK+ L ++ +R Sbjct: 66 AVKATGATASVLYVPAPSCAASIEEALDAELPLVVVITEGIPQWDMLRVKSMLLSQNKTR 125 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 LIGPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ EGLGQS VGI Sbjct: 126 LIGPNCPGIIKPAECKIGIMPGHIHKRGKIGIVSRSGTLTYEAVAQTTAEGLGQSLCVGI 185 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDP GT +D L LFL D TE I+++GEIGG+AEEEAA F+K+ KKPIV F+ Sbjct: 186 GGDPFNGTNMVDCLRLFLNDPETEGIILIGEIGGTAEEEAADFIKNSPI---KKPIVSFI 242 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G TAPPGR MGHAGA++SGG G A+ K A++ AG+ I+ SPA +G+ + EL + Sbjct: 243 GGATAPPGRRMGHAGAIVSGGMGTAKGKKEALRAAGVTISDSPAHLGKHMAELFST 298 >gi|325921601|ref|ZP_08183442.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas gardneri ATCC 19865] gi|325922866|ref|ZP_08184590.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas gardneri ATCC 19865] gi|325923845|ref|ZP_08185454.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas gardneri ATCC 19865] gi|325545679|gb|EGD16924.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas gardneri ATCC 19865] gi|325546659|gb|EGD17789.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas gardneri ATCC 19865] gi|325547912|gb|EGD18925.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas gardneri ATCC 19865] Length = 291 Score = 315 bits (806), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 173/299 (57%), Positives = 218/299 (72%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q I Y TQVVGG+ P KG T ++++PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMIEY-GTQVVGGVTPGKGGTT----HIDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L ++ Sbjct: 56 TVADAVSATGADASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRA 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HPDTVLIGPNCPGVITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKQFV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L+ Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAALV 290 >gi|157870846|ref|XP_001683973.1| succinyl-CoA synthetase alpha subunit [Leishmania major strain Friedlin] gi|157870848|ref|XP_001683974.1| succinyl-CoA synthetase alpha subunit [Leishmania major strain Friedlin] gi|68127040|emb|CAJ05552.1| putative succinyl-CoA synthetase alpha subunit [Leishmania major strain Friedlin] gi|68127041|emb|CAJ05553.1| putative succinyl-CoA synthetase alpha subunit [Leishmania major strain Friedlin] Length = 299 Score = 315 bits (806), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 173/296 (58%), Positives = 220/296 (74%), Gaps = 9/296 (3%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 V+K+TKV+VQG+TGKAGTFHT++A+ Y T+VVGG+ PKK T G VPVF T AE Sbjct: 11 VNKDTKVIVQGMTGKAGTFHTKEAMAY-GTKVVGGVSPKKAGTTALG----VPVFATAAE 65 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSR 123 A + T A ASV+YVP +I E+++AE+PL+V ITEGIP DM+RVK+ L ++ +R Sbjct: 66 AVKATGATASVLYVPAPLCAASIEEALDAELPLVVVITEGIPQWDMLRVKSMLLSQNKTR 125 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 LIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ EGLGQS VGI Sbjct: 126 LIGPNCPGIIKPAECKIGIMPGHIHQKGKIGIVSRSGTLTYEAVAQTTAEGLGQSLCVGI 185 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDP GT +D L LFL D TE I+++GEIGG+AEEEAA F+K+ KKPIV F+ Sbjct: 186 GGDPFNGTNMVDCLRLFLNDPETEGIILIGEIGGTAEEEAADFIKNSP---IKKPIVSFI 242 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G TAPPGR MGHAGA++SGG G A+ K +A++ AG+ I+ SPA +G+ + EL + Sbjct: 243 GGATAPPGRRMGHAGAIVSGGMGTAKGKKDALRAAGVTISDSPAHLGKHMAELFAT 298 >gi|257453547|ref|ZP_05618837.1| succinate-CoA ligase, alpha subunit family [Enhydrobacter aerosaccus SK60] gi|257449005|gb|EEV23958.1| succinate-CoA ligase, alpha subunit family [Enhydrobacter aerosaccus SK60] Length = 300 Score = 315 bits (806), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 165/308 (53%), Positives = 217/308 (70%), Gaps = 19/308 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV K+TKVLVQG TGK GT H+EQ+I Y T +VGG+ P KG T +++ PVF Sbjct: 1 MSVLVGKDTKVLVQGFTGKNGTLHSEQSIAYG-TNIVGGVTPGKGGTT----HLDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T ANASVI+VP D+I+E+I + + LIV ITEG+P LDM++ K LE Sbjct: 56 TMDEAVTATGANASVIFVPAPFVLDSIVEAINSGVKLIVVITEGVPTLDMLKAKRYLENV 115 Query: 121 SS----------RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 ++ R++GPNCPG+++P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT Sbjct: 116 NADLQAKGEEIIRMVGPNCPGVISPGKCKIGIMPGHIHQEGKVGIISRSGTLTYEAVAQT 175 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 ++ G GQST +GIGGDP+ G ID L+L D TE+IV++GEIGG+AEEEAA ++KD Sbjct: 176 TKLGFGQSTCIGIGGDPIPGMNQIDALKLLQDDPQTEAIVLIGEIGGTAEEEAAAYVKDH 235 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 KP++G++AG TAP G+ MGHAGA+ISGGKG AE+K A +EAGI P++IG Sbjct: 236 V----TKPVIGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFKAFEEAGIAYTRDPSKIG 291 Query: 291 RSLVELLG 298 + E+ G Sbjct: 292 EKVKEVTG 299 >gi|115438324|ref|XP_001218037.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114188852|gb|EAU30552.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 331 Score = 314 bits (805), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 170/294 (57%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH EQAI Y T+VVGG +PKK T +++ PVF Sbjct: 36 NLRINADTKVIFQGFTGKQGTFHAEQAIAYG-TKVVGGTNPKKAGTM----HLDRPVFAN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A I E++EAEIPL VCITEGIP DMVR+ L+ ++ Sbjct: 91 VRDAVKETGATASAIFVPPPLAAKGIEEALEAEIPLAVCITEGIPQHDMVRITDMLKTQN 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+M+GEIGGSAEE+AA+F K A KP V Sbjct: 211 VGIGGDPFSGTNFIDCLKIFLEDPETDGIIMIGEIGGSAEEDAAEFFK--ANNVHNKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AG +APPGR MGHAGA++SGGKGGA+ KI+A+++AG+ + SPA +G++L+ Sbjct: 269 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALQDAGVVVERSPAGLGKALL 322 >gi|119356239|ref|YP_910883.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Chlorobium phaeobacteroides DSM 266] gi|119353588|gb|ABL64459.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Chlorobium phaeobacteroides DSM 266] Length = 299 Score = 314 bits (805), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 169/303 (55%), Positives = 228/303 (75%), Gaps = 10/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T+++VQG+TG GTFHT Q IL T VV G+ P KG T + G + Sbjct: 1 MSVLVNKDTRLVVQGITGGEGTFHTSQ-ILEYGTNVVAGVTPGKGGTIYHGNERDHFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV +A ++ ANA+VI+VP A DAI+E+ +A + +I+CITEGIPV DM++ A Sbjct: 60 VPVFNTVKDAVDKAEANATVIFVPAPFAADAIMEAADAGLKVIICITEGIPVNDMMKAYA 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + L+GPNCPG++TP K+GIMPG I KG++G++SRSGTLTYEAV Q + GL Sbjct: 120 FVKEKGAVLVGPNCPGVITPGEAKVGIMPGFIHMKGTIGVVSRSGTLTYEAVHQLTAVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT FID ++LF D+ TE +VM+GEIGGSAEEEAA+++ KR Sbjct: 180 GQSTCIGIGGDPIIGTRFIDAIKLFAKDDETEGLVMIGEIGGSAEEEAAEYI----KRYF 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG AEDKI+AM+ AGI + +P IG ++++ Sbjct: 236 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAEDKIHAMEAAGIHMVDNPGDIGTAMLK 295 Query: 296 LLG 298 LG Sbjct: 296 ALG 298 >gi|319779687|ref|YP_004130600.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Taylorella equigenitalis MCE9] gi|317109711|gb|ADU92457.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Taylorella equigenitalis MCE9] Length = 293 Score = 314 bits (805), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 163/301 (54%), Positives = 211/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TG G FHT Y + V G HPKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGNTGAFHTRMCRDYANGKECFVAGTHPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F V EAKE T A SVIYVPP A AIIE++EAE+ L++CITEGIPV DM+ V+ R++ Sbjct: 57 FAKVKEAKEATGATVSVIYVPPMAAAGAIIEAVEAELDLVICITEGIPVRDMLTVRQRMK 116 Query: 119 K--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S + L+GPNCPG++TPD KIGIMPG I RKG VGI+SRSGTLTYEAV Q ++ G+G Sbjct: 117 DLGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGKVGIVSRSGTLTYEAVAQVTELGMG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDVL++F D TE+++M+GEIGG E AA++ KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVLKMFNDDPETEAVIMIGEIGGPDEVNAAEWAKDN----MK 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI +P+ +G+ L + Sbjct: 233 KPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLEIMEACGIKTTRNPSEMGKLLKSI 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|285808255|gb|ADC35788.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [uncultured bacterium 282] Length = 291 Score = 314 bits (805), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 166/298 (55%), Positives = 225/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+K T+++VQG+TG+ GTFH + Y T+VVGG+ P KG T G PVF Sbjct: 1 MAVLVNKETRLIVQGITGREGTFHAKGCAEY-GTKVVGGVTPGKGGTTHEG----WPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T AN SVI+VPP A D I+E+ A +PL++CITEGIPVLDM++ +++S Sbjct: 56 TVEEAVKETGANVSVIFVPPPFAADGILEATAAGVPLVICITEGIPVLDMIKTWEVVKQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG+++P K+GIMPG I ++G+VGI+S+SGTLTYEAV+Q +Q G+GQSTA Sbjct: 116 KTRLIGPNCPGVISPGKAKVGIMPGRIHKEGNVGIVSKSGTLTYEAVYQLTQRGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID L+L D TE+I+M+GEIGG+AEE AA+++K+ KKP+V Sbjct: 176 IGIGGDPIIGTTHIDALKLLNEDPETEAIIMIGEIGGTAEEAAAKYIKENV----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+ISGG+G A +K+ AM AGI + SPA IG ++ ++LG Sbjct: 232 GFIAGQTAPPGRRMGHAGAIISGGEGTAAEKMKAMSAAGITVVKSPAEIGDAMAKVLG 289 >gi|163856373|ref|YP_001630671.1| succinyl-CoA synthetase subunit alpha [Bordetella petrii DSM 12804] gi|163260101|emb|CAP42402.1| Succinyl-CoA synthase, alpha subunit [Bordetella petrii] Length = 293 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 163/301 (54%), Positives = 217/301 (72%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G+HPKK + G VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCREYANGKAAFVAGVHPKKAGEDFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V +AK++T A SVIYVPP+GA AI E++EAE+ L++CITEGIPV DM+ VK R++ Sbjct: 57 FGSVQDAKDKTGATVSVIYVPPAGAAAAIWEAVEAELDLVICITEGIPVRDMLEVKNRMK 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 +S+ L+GPNCPG++TPD KIGIMPG I RKG +GI+SRSGTLTYEAV Q ++ GLG Sbjct: 117 AKNSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGIVSRSGTLTYEAVAQVTELGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + +DVL+LF D T++++M+GEIGG E AAQ+ KD K Sbjct: 177 QSSAVGIGGDPINGLKHVDVLKLFNDDPDTDAVIMIGEIGGPDEVNAAQWAKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI +P+ +G+ L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLEVMEACGIRTTRNPSEMGKLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|9483736|gb|AAD33927.2|AF144101_1 succinyl-CoA synthetase [Mus musculus] Length = 333 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 178/294 (60%), Positives = 226/294 (76%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I +DKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 37 IYIDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQKHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS-S 121 EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DMVRVK RL + + Sbjct: 92 KEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGT 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+S+SGTLTYEAV QT+Q GLG S + Sbjct: 152 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSKSGTLTYEAVHQTTQVGLGHSLCI 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG AEE AA FLK+ + KP+V Sbjct: 212 GIGGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENAAAFLKEHNSGPKAKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 272 FIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 325 >gi|319942904|ref|ZP_08017187.1| succinyl-CoA synthetase subunit alpha [Lautropia mirabilis ATCC 51599] gi|319743446|gb|EFV95850.1| succinyl-CoA synthetase subunit alpha [Lautropia mirabilis ATCC 51599] Length = 293 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 158/301 (52%), Positives = 215/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCRDYANGKNCFVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA DAI E+++A++ L++CITEGIPV DM+ V+ ++ Sbjct: 57 YGSVKEAKAETGATVSVIYVPPAGAADAIWEAVDADLDLVICITEGIPVRDMLVVRDKMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K++ + L+GPNCPG++TPD KIGIMPG I RKG +GI+SRSGTLTYEAV Q + GLG Sbjct: 117 KANKKTLLLGPNCPGVITPDELKIGIMPGHIHRKGRIGIVSRSGTLTYEAVAQVTDLGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QSTAVGIGGDP+ G + IDVL++F D T++++M+GEIGG E AA++ KD K Sbjct: 177 QSTAVGIGGDPINGLKHIDVLQMFNDDPDTDAVIMIGEIGGPDEVNAARWAKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI P+ +GR L ++ Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLEVMEACGIRTTRDPSEMGRLLKKV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|225874176|ref|YP_002755635.1| succinyl-CoA synthetase alpha chain [Acidobacterium capsulatum ATCC 51196] gi|225792317|gb|ACO32407.1| succinyl-CoA synthetase alpha chain [Acidobacterium capsulatum ATCC 51196] Length = 291 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 168/298 (56%), Positives = 226/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+K T+++VQG+TGK GTFH + Y T+VVGG+ P KG T G PVF Sbjct: 1 MAVLVNKETRLIVQGITGKEGTFHAKGCAEYG-TKVVGGVTPGKGGTTHEG----WPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T ANA+VI+VPP A DAI+E+ EA +PLI+CITEGIPV DMV+V + L+ S Sbjct: 56 TVQKAVEETGANATVIFVPPPFAADAILEANEAGLPLIICITEGIPVNDMVKVWSVLKHS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S L+GPNCPG+++P KIGIMPG I ++G+VGI+SRSGTLTYEAV+Q +Q G+GQSTA Sbjct: 116 KSTLVGPNCPGVISPGKAKIGIMPGRIHKEGNVGIVSRSGTLTYEAVYQLTQRGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT +D L+L D TE+I+++GEIGG+AEE AA+++++ KKP+V Sbjct: 176 IGIGGDPIIGTTHVDALKLLNEDSETEAIILIGEIGGTAEETAAEYVRNHV----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+ISGG+G A +K+ A+ AGI + SPA IG ++ ++G Sbjct: 232 GFIAGQTAPPGRRMGHAGAIISGGQGTAAEKMKALTAAGIHVVQSPAEIGETVARVIG 289 >gi|320108311|ref|YP_004183901.1| succinyl-CoA synthetase subunit alpha [Terriglobus saanensis SP1PR4] gi|319926832|gb|ADV83907.1| succinyl-CoA synthetase, alpha subunit [Terriglobus saanensis SP1PR4] Length = 291 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 169/298 (56%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVDKNT+++VQG+TG+ GTFH + Y T+VVGG+ P KG T G PVF Sbjct: 1 MAVLVDKNTRLIVQGITGREGTFHAKGCAEY-GTKVVGGVTPGKGGTIHEG----WPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T ANA+VI+VPP A D I+E++ A++PL++CITEGIP LDMV+ + ++ S Sbjct: 56 TVEEAVKETGANATVIFVPPPFAADGILEAVAAQLPLVICITEGIPTLDMVKAWSIVKDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG+++P KIGIMPG I ++G+VGI+SRSGTLTYEAV+Q + G+GQSTA Sbjct: 116 KSVLIGPNCPGVISPGKAKIGIMPGRIHKEGNVGIVSRSGTLTYEAVYQLTTRGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + L+L D TE+I+M+GEIGG+AEE AA F+K KKP+V Sbjct: 176 IGIGGDPIIGTNHVAALKLLNDDPETEAIIMIGEIGGTAEEAAADFIKQYV----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+ISGG+G AE K+ AM+ AGI + SPA IG + +LG Sbjct: 232 GFIAGQTAPPGRRMGHAGAIISGGEGTAESKMAAMEAAGIHVVKSPAEIGEMMARVLG 289 >gi|224370323|ref|YP_002604487.1| SucD2 [Desulfobacterium autotrophicum HRM2] gi|223693040|gb|ACN16323.1| SucD2 [Desulfobacterium autotrophicum HRM2] Length = 289 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 168/281 (59%), Positives = 202/281 (71%), Gaps = 10/281 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI VDK T+++VQG+TGK G FHT Q I Y T+VV G+ P KG VPVF Sbjct: 1 MSIFVDKETRLVVQGITGKEGQFHTRQCIEY-GTKVVAGVTPGKGGQQMD----KVPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+T ANAS+I+VPP DAI+E+ ++ + LIV ITEGIPV+DMVRVK L Sbjct: 56 TVAEAVEQTGANASMIFVPPPFCADAIMEAADSGVDLIVAITEGIPVMDMVRVKNFLVTK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS-VGILSRSGTLTYEAVFQTSQEGLGQST 179 + RLIGPNCPGI+TP CKIGIMPG I G G++SRSGTLTYE V Q ++ G+GQ+T Sbjct: 116 TCRLIGPNCPGIITPGECKIGIMPGKIHMPGGPAGVISRSGTLTYEVVDQLTKLGIGQTT 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT FIDVL+ F D T IVMVGEIGG+AEEEAA F+K KP+ Sbjct: 176 CIGIGGDPINGTNFIDVLQAFENDPDTRGIVMVGEIGGNAEEEAAAFIKAHV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 VGF+AG TAPPGR MGHAGA+ISGG G + KI AM++ GI Sbjct: 232 VGFIAGLTAPPGRRMGHAGAIISGGSGTGQAKIEAMEKNGI 272 >gi|15834829|ref|NP_296588.1| succinyl-CoA synthetase subunit alpha [Chlamydia muridarum Nigg] gi|270284995|ref|ZP_06194389.1| succinyl-CoA synthetase subunit alpha [Chlamydia muridarum Nigg] gi|270289018|ref|ZP_06195320.1| succinyl-CoA synthetase subunit alpha [Chlamydia muridarum Weiss] gi|301336392|ref|ZP_07224594.1| succinyl-CoA synthetase subunit alpha [Chlamydia muridarum MopnTet14] gi|7190246|gb|AAF39081.1| succinyl-CoA synthetase, alpha chain [Chlamydia muridarum Nigg] Length = 291 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 157/296 (53%), Positives = 213/296 (71%), Gaps = 9/296 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 L++K+ ++ QG+TGKAG+FHT Q + Y + VGG+ P KG T + +++P+F +V Sbjct: 4 LLNKDLPIITQGITGKAGSFHTTQCVAY-GSNFVGGVTPGKGGTQF----LDLPIFDSVL 58 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 EAK+ T AS+I+VPP A +AI E+ +A I LIVCITEGIPV DM+ V + +EKSS R Sbjct: 59 EAKQATGCRASMIFVPPPFAAEAIFEAEDAGIELIVCITEGIPVQDMLAVNSLMEKSSCR 118 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPNCPG++ P +CKIGIMPG I G+VG++SRSGTLTYEAV+Q +Q +GQS +GI Sbjct: 119 LVGPNCPGVIKPGACKIGIMPGYIHLPGNVGVISRSGTLTYEAVWQLTQRKIGQSVCIGI 178 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDP+ GT FIDVL+ DE TE+I+M+GEIGGSAEE+AA ++ KP++ F+ Sbjct: 179 GGDPLNGTSFIDVLQELEKDEQTEAILMIGEIGGSAEEDAADWISQHC----SKPVIAFI 234 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 AG TAP G+ MGHAGA+ISG G A K A++EAG+ + SPA IG ++ +L S Sbjct: 235 AGATAPKGKRMGHAGAIISGNSGDAFSKQRALREAGVVVVESPALIGEAVASVLNS 290 >gi|289743035|gb|ADD20265.1| succinyl-CoA synthetase alpha subunit [Glossina morsitans morsitans] Length = 331 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 173/300 (57%), Positives = 231/300 (77%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ +N++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF Sbjct: 34 NLLLTENSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFKN 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 VAEAK+ T +A+VIYVPP+GA AI+E++E+EIPLIVCITEG+P DMVRVK A L + Sbjct: 89 VAEAKKATDPHATVIYVPPAGAAAAILEALESEIPLIVCITEGVPQHDMVRVKHALLTQQ 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 149 KSRLVGPNCPGIIAPERCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVNQTTEVGLGQTLC 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA++L + KP+V Sbjct: 209 VGIGGDPFNGTDFIDCLEIFLRDPDTKGIILIGEIGGVAEEKAAEYLSYFNTGMKAKPVV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++A + + SPA++G+ L + + L Sbjct: 269 SFIAGLSAPPGRRMGHAGAIISGGKGGAGDKIKALEKANVIVTRSPAQMGKELHKEMKRL 328 >gi|291288246|ref|YP_003505062.1| succinyl-CoA synthetase, alpha subunit [Denitrovibrio acetiphilus DSM 12809] gi|290885406|gb|ADD69106.1| succinyl-CoA synthetase, alpha subunit [Denitrovibrio acetiphilus DSM 12809] Length = 295 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 162/299 (54%), Positives = 212/299 (70%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+ TKVLVQGLTG G FH ++ Y T +V G+ P KG G PVF Sbjct: 1 MSILVNNRTKVLVQGLTGSQGRFHAQKMKEY-GTNIVAGVVPGKGGLEVDG----TPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T ANAS++YVPP+ A DA+IESI+A + L VCITEGIPV DM+ VK + S Sbjct: 56 TVEEAIRKTGANASIVYVPPAYAADAVIESIDANLDLCVCITEGIPVKDMIMVKRLMTTS 115 Query: 121 SSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 SSR L+GPNCPG++TP CK+GIMPG I + G++GI+S+SGTLTYEAV Q EG GQS Sbjct: 116 SSRTMLVGPNCPGVITPGECKMGIMPGEIHKPGTIGIISKSGTLTYEAVKQVGAEGFGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ++ID+LE+F D TE +V++GEIGG AE +A +++ K+ KP Sbjct: 176 TCIGIGGDPIVGLKYIDLLEMFEYDAQTECVVLIGEIGGQAEVKAGEWI----KQNFSKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +V F+AG+TAP G+ MGHAGA+ISGG A K+ A++E G+ + SPA IG+ + E+L Sbjct: 232 VVSFIAGQTAPKGKRMGHAGAIISGGDDTAAAKMKALREHGVHVVESPADIGKKVAEVL 290 >gi|26354008|dbj|BAC40634.1| unnamed protein product [Mus musculus] Length = 333 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 179/294 (60%), Positives = 225/294 (76%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I +DKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 37 IYIDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQKHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS-S 121 EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DMVRVK RL + + Sbjct: 92 KEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGT 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P C IGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS + Sbjct: 152 TRLIGPNCPGIINPGECXIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCI 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GI GDP GT+FID LE+FL D ATE I+++GEIGG AEE AA FLK+ + KP+V Sbjct: 212 GIXGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENAAAFLKEHNSGPKAKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 272 FIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 325 >gi|193216377|ref|YP_001997576.1| succinyl-CoA synthetase subunit alpha [Chloroherpeton thalassium ATCC 35110] gi|193089854|gb|ACF15129.1| succinyl-CoA synthetase, alpha subunit [Chloroherpeton thalassium ATCC 35110] Length = 299 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 167/303 (55%), Positives = 227/303 (74%), Gaps = 10/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T+++VQG+TG GTFHT Q + Y T VV G+ P KG + G + Sbjct: 1 MSVLVNKDTRLVVQGITGGEGTFHTSQMLEY-GTNVVAGVTPGKGGMQYNGNEKDPFIRE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VP+F TV +A ++ AN SVI+VP + AGDAI+E+ EA I +I+CITEGIPV DM++ Sbjct: 60 VPIFNTVKDAVKKAEANTSVIFVPAAFAGDAIMEAAEAGIKVIICITEGIPVNDMMKAYF 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + L+GPNCPG++TP KIGIMPG I + GS+G++SRSGTLTYEAV Q +Q GL Sbjct: 120 FVKEKGAVLVGPNCPGVITPGEAKIGIMPGFIHKPGSIGVISRSGTLTYEAVNQLTQVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT+F+D ++LF D TE +V++GEIGG+AEEEAA ++ KR Sbjct: 180 GQSTCIGIGGDPIIGTKFLDAVKLFAKDPDTEGLVVIGEIGGNAEEEAAAYI----KRNY 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG AEDK+ AM+ AGI + +PA IG ++++ Sbjct: 236 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAEDKLAAMRSAGIYVVENPADIGETMLK 295 Query: 296 LLG 298 LG Sbjct: 296 ALG 298 >gi|118580135|ref|YP_901385.1| succinyl-CoA synthetase subunit alpha [Pelobacter propionicus DSM 2379] gi|118502845|gb|ABK99327.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Pelobacter propionicus DSM 2379] Length = 296 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 160/297 (53%), Positives = 211/297 (71%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NT+ +VQG+TG++G FH +Q Y +QVVGG+ P KG + G PVF Sbjct: 1 MSILIDGNTRFVVQGITGRSGLFHAQQCRAY-GSQVVGGVTPGKGGSEIDG----FPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A T A AS+I+VPP A D+I+E+++A + L VCITEGIPV DMV +A LE S Sbjct: 56 TLEQAVRATGATASLIFVPPPAAADSILEAVDAGLELCVCITEGIPVRDMVLARAVLEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPN PG++TP CK+GIMPG I G +G++SRSGTLTYE V Q + GLGQST Sbjct: 116 KTRLVGPNSPGVITPGQCKMGIMPGQIHAPGRIGVISRSGTLTYEIVRQLTDRGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGD + G +F DVL+LF D T+ + MVGEIGG+AEEEAA ++++ KP+ Sbjct: 176 VGIGGDAIIGMKFSDVLKLFNDDPDTDGVFMVGEIGGTAEEEAALWIRENM----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 FVAG +APPG+ MGHAGA+IS GKG A DKI +KE G+ +A SP R+G +++E L Sbjct: 232 AFVAGVSAPPGKRMGHAGAIISAGKGKATDKIRTLKECGVTVADSPIRMGEAMIEAL 288 >gi|239817448|ref|YP_002946358.1| succinyl-CoA synthetase subunit alpha [Variovorax paradoxus S110] gi|239804025|gb|ACS21092.1| succinyl-CoA synthetase, alpha subunit [Variovorax paradoxus S110] Length = 299 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 158/299 (52%), Positives = 211/299 (70%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+T+V+ QG+TGK G FHT Y Q V G++P K + G +PV Sbjct: 1 MSILINKHTRVITQGITGKTGQFHTAMCRDYANGQKCFVAGVNPNKAGKSFDG----IPV 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV EAK T A SVIYVPP A AI E+++A + L+VCITEGIPV DM+R + R+E Sbjct: 57 FGTVKEAKAETGATVSVIYVPPPFAAAAIDEAVDAGLDLVVCITEGIPVRDMIRTRHRME 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S + L+GPNCPG++TP+ KIGIMPG I +KG +G++SRSGTLTYEA Q + G+GQS Sbjct: 117 GSKTLLLGPNCPGLITPEEIKIGIMPGHIHQKGRIGVVSRSGTLTYEAASQLASFGIGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV G IDVL++F D T++++MVGEIGGS EE A+++ + +KP Sbjct: 177 TVVGIGGDPVGGLRHIDVLKMFNDDPRTDAVIMVGEIGGSDEETCARWISEHM----RKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG +APPG+ MGHAGA++SGGKG A +K+ MKE GI + +PA +G+ L L+ Sbjct: 233 VVGFIAGASAPPGKRMGHAGAIVSGGKGTAREKLAVMKECGIHVTDNPAEMGKLLASLV 291 >gi|331000519|ref|ZP_08324191.1| succinyl-CoA synthetase, alpha subunit [Parasutterella excrementihominis YIT 11859] gi|329571483|gb|EGG53168.1| succinyl-CoA synthetase, alpha subunit [Parasutterella excrementihominis YIT 11859] Length = 298 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 169/306 (55%), Positives = 217/306 (70%), Gaps = 18/306 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY-----CQTQVVGGIHPKKGSTYWTGGNVN 55 MSILV+KN++V+ QG+TGK G FHT Y C VGG++PKK W G Sbjct: 1 MSILVNKNSRVITQGMTGKTGQFHTRLCRDYGFGPEC---FVGGVNPKKAGQEWEG---- 53 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +P+F TV EA+ +T AN SVIYVPP+GA AI E+ +A I LIVCITEGIPV+DMV+V+ Sbjct: 54 LPIFGTVKEARAKTGANVSVIYVPPAGAAAAIQEASDAGIELIVCITEGIPVMDMVKVRD 113 Query: 116 RLEKSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 ++K+ S+ L+GPNCPGI+TP +GIMP I RKG +G++SRSGTLTYEAV Q + Sbjct: 114 HMKKTGSKSLLLGPNCPGIMTPGEINVGIMPAHIHRKGRIGVVSRSGTLTYEAVAQITAL 173 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 GLGQSTA+GIGGDP+ G + IDVL+LF D T+++VM+GEIGGS EE AA+++KD Sbjct: 174 GLGQSTAIGIGGDPINGLKHIDVLKLFNDDPETDAVVMIGEIGGSDEETAAEWVKDHM-- 231 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KKP+VGF+AG TAP G+ MGHAGA+ISGG G AE K+ M+ GI +P+ IG L Sbjct: 232 --KKPVVGFIAGVTAPAGKRMGHAGAIISGGTGTAEGKLAVMEACGIRTTRNPSEIGSLL 289 Query: 294 VELLGS 299 +L S Sbjct: 290 QSVLSS 295 >gi|33519794|ref|NP_878626.1| succinyl-CoA synthetase alpha chain [Candidatus Blochmannia floridanus] gi|33504139|emb|CAD83401.1| succinyl-CoA synthetase alpha chain [Candidatus Blochmannia floridanus] Length = 296 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 159/298 (53%), Positives = 216/298 (72%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+NTKV+ QG TGK +FH+ Q++LY T+++GG+ P KG G +PVF Sbjct: 1 MSILIDQNTKVICQGFTGKKASFHSRQSLLY-GTKILGGVTPGKGGYTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A SVIYVP DAI+E+I+++I LIVCITEG+P+LDM+ +K +L+K Sbjct: 56 TVHEAICHTNATVSVIYVPALFCKDAILEAIDSKIKLIVCITEGMPILDMLIIKNQLKKQ 115 Query: 121 SSR-LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +S +IGPNCPGI+TP+ CKIGIMPG I G++GI+SRSGTLTYE V Q + GLGQST Sbjct: 116 NSCIMIGPNCPGIITPNQCKIGIMPGYIHNAGNIGIVSRSGTLTYEVVKQITDIGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ G++FID+L LF D TE I+M+GEIGG +E+EAA ++ K+ KPI Sbjct: 176 CVGIGGDPILGSDFIDILRLFEKDPQTELIIMIGEIGGQSEQEAASYI----KKYITKPI 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V ++AG TAP G+ MGHAGA+ISG GA +K + ++G+ I + A IG+++ ++L Sbjct: 232 VAYIAGLTAPKGKRMGHAGAIISGKHSGAHEKCTVLSKSGVHIVNNFAYIGKTISKIL 289 >gi|261198353|ref|XP_002625578.1| succinyl-CoA synthetase alpha subunit [Ajellomyces dermatitidis SLH14081] gi|239594730|gb|EEQ77311.1| succinyl-CoA synthetase alpha subunit [Ajellomyces dermatitidis SLH14081] gi|239610147|gb|EEQ87134.1| succinyl-CoA synthetase alpha subunit [Ajellomyces dermatitidis ER-3] gi|327356378|gb|EGE85235.1| succinyl-CoA ligase alpha-chain [Ajellomyces dermatitidis ATCC 18188] Length = 331 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 169/294 (57%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T +VGG +PKK G PVF T Sbjct: 36 NLRINSDTKVIYQGFTGKQGTFHAQQAIEY-GTNIVGGTNPKKAGETHLGK----PVFAT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A +I E+IE+E+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 91 VRDAVKETGATASAIFVPPPVAAKSIEEAIESEVPLVVCITEGIPQHDMVRITDILKTQN 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D+ T+ I+M+GEIGGSAEEEAA+F K E KP V Sbjct: 211 VGIGGDPFSGTNFIDCLKVFLKDDETDGIIMIGEIGGSAEEEAAEFFKQE--NVGNKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L+ Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALEAAGVIVERSPAALGKTLL 322 >gi|303256572|ref|ZP_07342586.1| succinyl-CoA synthetase, alpha subunit [Burkholderiales bacterium 1_1_47] gi|302860063|gb|EFL83140.1| succinyl-CoA synthetase, alpha subunit [Burkholderiales bacterium 1_1_47] Length = 298 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 169/306 (55%), Positives = 217/306 (70%), Gaps = 18/306 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY-----CQTQVVGGIHPKKGSTYWTGGNVN 55 MSILV+KN++V+ QG+TGK G FHT Y C VGG++PKK W G Sbjct: 1 MSILVNKNSRVITQGMTGKTGQFHTRLCRDYGFGPEC---FVGGVNPKKAGQEWEG---- 53 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +P+F TV EA+ +T AN SVIYVPP+GA AI E+ +A I LIVCITEGIPV+DMV+V+ Sbjct: 54 LPIFGTVKEARAKTGANVSVIYVPPAGAAAAIQEASDAGIELIVCITEGIPVMDMVKVRD 113 Query: 116 RLEKSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 ++K+ S+ L+GPNCPGI+TP +GIMP I RKG +G++SRSGTLTYEAV Q + Sbjct: 114 HMKKTGSKSLLLGPNCPGIMTPGEINVGIMPAHIHRKGRIGVVSRSGTLTYEAVAQITAL 173 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 GLGQSTA+GIGGDP+ G + IDVL+LF D T+++VM+GEIGGS EE AA+++KD Sbjct: 174 GLGQSTAIGIGGDPINGLKHIDVLKLFNDDPETDAVVMIGEIGGSDEETAAEWVKDHM-- 231 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KKP+VGF+AG TAP G+ MGHAGA+ISGG G AE K+ M+ GI +P+ IG L Sbjct: 232 --KKPVVGFIAGVTAPTGKRMGHAGAIISGGTGTAEGKLAVMEACGIRTTRNPSEIGSLL 289 Query: 294 VELLGS 299 +L S Sbjct: 290 QSVLSS 295 >gi|309792412|ref|ZP_07686879.1| succinyl-CoA synthetase, alpha subunit [Oscillochloris trichoides DG6] gi|308225567|gb|EFO79328.1| succinyl-CoA synthetase, alpha subunit [Oscillochloris trichoides DG6] Length = 291 Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 167/298 (56%), Positives = 213/298 (71%), Gaps = 7/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ T++LVQG+TGK G FHT Q I Y TQVV G+ P +G G V PVF Sbjct: 1 MSILINNETRLLVQGITGKEGEFHTRQMIAYG-TQVVAGVVPGRGGQTAIDGQV--PVFN 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T AN SVIYVP + A DAI ES A IPL+VCITEGIP LDMV +++ Sbjct: 58 TVREAVEATGANVSVIYVPAAFAPDAIRESAAAGIPLVVCITEGIPALDMVATYEFVQQC 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP + K+GI+PG+I G VG++S+SGTLTYEAV ++ GLGQS+ Sbjct: 118 GSRLIGPNCPGLLTPGAAKVGIIPGNIATPGPVGVVSKSGTLTYEAVDALTRLGLGQSSI 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F+DVL +F ADE T++IV++GEIGG AE +AA F+K KP+V Sbjct: 178 VGIGGDPIIGTSFVDVLAMFQADEQTKAIVLIGEIGGDAEIQAANFIKANV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG+TAP G+ MGHAGA+ISGG+G A++KI A++ G +A P I + + E+LG Sbjct: 234 AFIAGQTAPEGKRMGHAGAIISGGEGTAQEKIRALEAVGAKVARLPTDIAQLVQEVLG 291 >gi|197116659|ref|YP_002137086.1| succinyl-CoA synthetase subunit alpha [Geobacter bemidjiensis Bem] gi|197086019|gb|ACH37290.1| succinyl-CoA synthetase, alpha subunit [Geobacter bemidjiensis Bem] Length = 298 Score = 312 bits (800), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 165/299 (55%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+++++VQG+TG++G FHT+Q Y + VV G+ P KG + G +PVF Sbjct: 1 MSILINKSSRIVVQGITGRSGLFHTQQCREY-GSNVVAGVTPGKGGIHIEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + T+AN S+I+VPP GA DAI+E+ A + L VCITEGIPV DMV VKA L++S Sbjct: 56 TVAEAVKYTSANVSMIFVPPPGAADAILEAAAAGLELAVCITEGIPVRDMVPVKAVLQQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP CKIGIMPG I + G +G++SRSGTLTYEAV Q + GLGQST Sbjct: 116 KLRLVGPNCPGVITPGECKIGIMPGHIHKPGKIGVVSRSGTLTYEAVKQLTDMGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G F+DVL++F D TE + M+GEIGG+AEEEAA +++ KKP+ Sbjct: 176 VGIGGDPIIGMNFVDVLKMFNEDPGTEGVFMIGEIGGAAEEEAAVWIQTHM----KKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPG+ MGHAGA+I+GGKG A DKI + E G+ +A SP ++G ++ +GS Sbjct: 232 AFIAGVTAPPGKRMGHAGAIITGGKGKAADKIRTLTECGVTVATSPTKMGEAMQTAMGS 290 >gi|198471011|ref|XP_002133634.1| GA23007 [Drosophila pseudoobscura pseudoobscura] gi|198145724|gb|EDY72261.1| GA23007 [Drosophila pseudoobscura pseudoobscura] Length = 340 Score = 312 bits (800), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 162/295 (54%), Positives = 222/295 (75%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K TK+LVQG TGK TFH+++A+ Y T VVGG+ PKKG T +++ PVF + Sbjct: 31 NLKINKETKLLVQGFTGKQATFHSQEALKY-GTNVVGGVSPKKGGTK----HLDKPVFKS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + +A+VI++PPS A D I +IE+EI LIV ITEGIP +DMVR+ L + Sbjct: 86 VAEATKELKPDATVIFIPPSNAADGIRSAIESEIGLIVAITEGIPQVDMVRIMQMLNCQE 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++PD CKIGIMPG I ++G VGI+SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLLGPNCPGIISPDQCKIGIMPGDIHKRGCVGIVSRSGTLTYEAVQQTTKTGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G GGDP GT FID L++FL+D T+ I+++GEIGGSAEE+AA+FLK + KP+V Sbjct: 206 IGCGGDPFNGTNFIDGLKIFLSDPETKGIILIGEIGGSAEEDAAEFLKQHNSGCKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG+TAPPGR MGHAGA+I+GGKG A K+ A+++AG+ ++ +P +G +L + Sbjct: 266 SFIAGQTAPPGRRMGHAGAIIAGGKGTAPAKVKALEKAGVIVSQNPCHMGSTLYK 320 >gi|296274211|ref|YP_003656842.1| succinyl-CoA synthetase subunit alpha [Arcobacter nitrofigilis DSM 7299] gi|296098385|gb|ADG94335.1| succinyl-CoA synthetase, alpha subunit [Arcobacter nitrofigilis DSM 7299] Length = 290 Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 166/297 (55%), Positives = 216/297 (72%), Gaps = 11/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHP-KKGSTYWTGGNVNVPVF 59 M+IL+DKNTKVLVQGLTG +FHT++AI Y T VV G+ P K+G + +++PV+ Sbjct: 1 MAILIDKNTKVLVQGLTGSQASFHTQRAIAY-GTNVVSGVVPGKRGQRH-----LDLPVY 54 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV AK T ANAS+IYVP DAIIE+ E I IVCITEGIP +DM+ +KA ++ Sbjct: 55 NTVECAKRLTGANASIIYVPAPFCKDAIIEASENGIETIVCITEGIPTIDMLDIKAVVDL 114 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + SRLIGPNCPGI+TP+ CK+GIMP SI GSVGI+SRSGTLTYEAV Q++ G GQST Sbjct: 115 NGSRLIGPNCPGIITPNQCKMGIMPESIHMAGSVGIVSRSGTLTYEAVNQSTLAGFGQST 174 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPV G++FID+L++F D T++IVM+GEIGG+ EE AA+++ K KP+ Sbjct: 175 CVGIGGDPVPGSDFIDILKMFEEDPDTKAIVMIGEIGGAKEEAAAEYI----KYNITKPV 230 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 V ++AG TAP G+ MGHAGA+I GGKG AE+K A++ AG+ + IG +L E+ Sbjct: 231 VSYIAGVTAPKGKRMGHAGAIIDGGKGTAEEKYLALERAGVTTVRTITAIGAALKEV 287 >gi|198433234|ref|XP_002123295.1| PREDICTED: similar to predicted protein [Ciona intestinalis] Length = 331 Score = 312 bits (799), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 172/295 (58%), Positives = 220/295 (74%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ TKV+ QG TGK GTFH++QAI Y T +VGG+ PKK T G +PVF Sbjct: 29 NMKINSQTKVICQGFTGKQGTFHSKQAIAY-GTNMVGGVSPKKAGTNHLG----LPVFKD 83 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 VAEA+E T A ASVIYVPP A AI+E+I+AEIPL+VCITEGIP DMV+VK RL++ Sbjct: 84 VAEAREATGAEASVIYVPPPFAAAAIMEAIDAEIPLVVCITEGIPQQDMVKVKRRLQQQD 143 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I G++GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 144 KTRLIGPNCPGIILPGECKIGIMPGHIHMPGNIGIVSRSGTLTYEAVHQTTNVGLGQTLC 203 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE+FL D TE I+++GEIGG AEE+AA +L + KP+V Sbjct: 204 VGIGGDPFNGTNFVDCLEVFLNDPQTEGILLIGEIGGGAEEKAAAYLAEHNTGANAKPVV 263 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGAE KI ++++AG+ + SPA +G ++++ Sbjct: 264 SFIAGLTAPPGRRMGHAGAIIAGGKGGAEGKIESLRDAGVNVTLSPAEMGITMIK 318 >gi|34557449|ref|NP_907264.1| succinyl-COA synthetase alpha chain [Wolinella succinogenes DSM 1740] gi|34483165|emb|CAE10164.1| SUCCINYL-COA SYNTHETASE ALPHA CHAIN [Wolinella succinogenes] Length = 294 Score = 312 bits (799), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 159/297 (53%), Positives = 216/297 (72%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K T+V+VQG TGK GTFH+EQ + Y TQ++GG+ P KG + G +PVF Sbjct: 1 MSILINKETRVIVQGFTGKEGTFHSEQCLAY-GTQILGGVTPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A AS+++VPP+ DA++E+ + I L V ITEG P+ DMV K +K Sbjct: 56 TVEEAVRETGAWASMVFVPPAFVADAVMEAASSGIKLAVVITEGAPIKDMVVAKRYAQKC 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPGI+T + CKIGIMPGSIF+ GS+G++S+SGTLTYEA Q Q G G STA Sbjct: 116 GMEIIGPNCPGIITSEECKIGIMPGSIFKSGSIGLISKSGTLTYEASHQIVQAGFGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G + ++L+ F DE TE+IV++GEIGG+ E EAA F+K+ KKP+V Sbjct: 176 IGIGGDPVIGLGYKELLDRFEKDEKTEAIVLIGEIGGTLEIEAASFIKERV----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAP G+ MGHAGA++SGG G A++K++A++EAG+ + SPA IG+++V LL Sbjct: 232 AFIAGQTAPKGKRMGHAGAIVSGGSGSAKEKMDALREAGVRVIESPADIGKAIVSLL 288 >gi|29840540|ref|NP_829646.1| succinyl-CoA synthetase subunit alpha [Chlamydophila caviae GPIC] gi|29834889|gb|AAP05524.1| succinyl-Coa synthetase, alpha chain [Chlamydophila caviae GPIC] Length = 291 Score = 312 bits (799), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 158/293 (53%), Positives = 214/293 (73%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M + K T ++ QG+TGKAG+FHTEQ + Y + +GG+ P KG T ++N+PV+ Sbjct: 1 MFCSLSKKTPIITQGITGKAGSFHTEQCLAY-GSNFIGGVTPGKGGTT----HLNLPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK+ T A++I+VPP+ A +AI+E+ +A I LIVCITEGIP+ DM+ V +E S Sbjct: 56 SVLEAKQATRCQATMIFVPPAYAAEAILEAEDAGIDLIVCITEGIPIKDMLEVSHVMEHS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPGI+ P +CKIGIMPG I G+VG++SRSGTLTYEAV+Q +Q +GQS Sbjct: 116 ASRLIGPNCPGIIKPGACKIGIMPGYIHLPGNVGLVSRSGTLTYEAVWQLTQRSIGQSVC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FIDVLE F D TE I+M+GEIGGSAEEEAA++++ KP+V Sbjct: 176 IGIGGDPLNGTSFIDVLEEFQNDPQTELILMIGEIGGSAEEEAAEWIQTYC----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG+TAP G+ MGHAGA+ISG G A+ K A+++AG+ + SPA IG ++ Sbjct: 232 AFIAGETAPKGKRMGHAGAIISGNSGDAKSKKEALRKAGVFVVESPALIGETV 284 >gi|116622479|ref|YP_824635.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Candidatus Solibacter usitatus Ellin6076] gi|116225641|gb|ABJ84350.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Candidatus Solibacter usitatus Ellin6076] Length = 288 Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 218/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKV+VQG TGK GTFH +Q+I Y V G + K G+ + PVF Sbjct: 1 MSVLVDKNTKVIVQGFTGKEGTFHAQQSIAYGTNVVGGVVPGKGGTQ-----QLERPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASVI+VPP A DAI+E+ +A + L+VCITEGIP LDMV+ A L+ Sbjct: 56 TVEQAVKATGANASVIFVPPPFAADAIMEAADAGVELVVCITEGIPALDMVKAWAFLQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI++P CKIGIMP SI R+G VG++SRSGTLTYEAV Q ++ G+GQST Sbjct: 116 KTRLIGPNCPGIISPGKCKIGIMPASIHREGHVGVVSRSGTLTYEAVGQLTKLGIGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT F+D LELF AD T +I+M+GEIGG+AEE AA ++K KKP+V Sbjct: 176 IGIGGDPIIGTTFLDALELFNADPDTHAIIMIGEIGGNAEETAAAYVKAHV----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GFVAG+TAPPGR MGHAGA+I+GG G AEDKI AM +AGI I +PA +G + L Sbjct: 232 GFVAGQTAPPGRRMGHAGAIIAGGSGKAEDKIAAMADAGITICSTPAELGEKVKSRL 288 >gi|148657356|ref|YP_001277561.1| succinyl-CoA synthetase subunit alpha [Roseiflexus sp. RS-1] gi|148569466|gb|ABQ91611.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Roseiflexus sp. RS-1] Length = 290 Score = 311 bits (798), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 164/297 (55%), Positives = 215/297 (72%), Gaps = 7/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNT++LVQG+TG+ G FHT Q I Y T VV G+ P +G G V PVF Sbjct: 1 MSILVDKNTRLLVQGITGREGEFHTRQMIAYG-TNVVAGVTPGRGGQTAIDGRV--PVFN 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA ++T AN SVIYVP + A DA+ E+ A IPLIVCITEGIP DMV A + + Sbjct: 58 TVAEAVKQTGANVSVIYVPAAFAPDAMREAAAAGIPLIVCITEGIPANDMVATYAFIREH 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG+LTP K+GI+PG+I G VG++S+SGTLTYEAV ++ GLGQ+T Sbjct: 118 GARLIGPNCPGLLTPGQAKVGIIPGNIATPGPVGVVSKSGTLTYEAVDALTRIGLGQTTI 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F+DVLE+F AD T +IV++GEIGG+AE +AA+++ KP+V Sbjct: 178 VGIGGDPIIGTSFVDVLEMFQADPETAAIVLIGEIGGAAEIDAAKYIAAHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAPPG+ MGHAGA+I+GG+G A++KI A++ G+ +A P I + + E+L Sbjct: 234 SFIAGQTAPPGKRMGHAGAIITGGEGTAQEKIAALEAVGVRVARLPTDIAQLVREVL 290 >gi|308512803|gb|ADO33055.1| succinyl-CoA synthetase alpha subunit [Biston betularia] Length = 300 Score = 311 bits (797), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 175/300 (58%), Positives = 224/300 (74%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++++ K TKV+VQG TGK GTFH++QA+ Y T +VGG+ PKK T G PVF T Sbjct: 3 NLVLTKATKVIVQGFTGKQGTFHSQQALDY-GTNIVGGVSPKKAGTEHLGK----PVFKT 57 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 V EA E+T +ASVIYVPP GA AI+E+IEAE+PLIVCITEG+P DMVRVK A L ++ Sbjct: 58 VREAMEKTQCHASVIYVPPPGAAAAILEAIEAEVPLIVCITEGVPQHDMVRVKHALLRQN 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ PD CKIGIMP ++ + G +G++SRSGTLTYEA QTS GLGQS Sbjct: 118 KSRLVGPNCPGIIAPDQCKIGIMPAAVHKAGMIGVVSRSGTLTYEACHQTSLTGLGQSLC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG+AEE A+++L + KP+V Sbjct: 178 VGIGGDPFNGTDFIDCLEVFLKDPNTKGIIVIGEIGGNAEELASEYLIQHNTGQKAKPVV 237 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPGR MGHAGA+ISGGKGGA DKI A+++A + + SPA++G L + + L Sbjct: 238 SFIAGLTAPPGRRMGHAGAIISGGKGGAMDKIKALEKANVIVTRSPAKMGVELHKEMKRL 297 >gi|325916244|ref|ZP_08178525.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas vesicatoria ATCC 35937] gi|325537538|gb|EGD09253.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas vesicatoria ATCC 35937] Length = 288 Score = 311 bits (797), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 171/296 (57%), Positives = 216/296 (72%), Gaps = 11/296 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 +++KNTKV+VQG TG+ GTFH Q I Y TQVVGG+ P KG T ++++PVF TVA Sbjct: 1 MINKNTKVIVQGFTGQQGTFHATQMIEY-GTQVVGGVTPGKGGTT----HIDLPVFNTVA 55 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS--S 121 +A + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 DAVQSTGADASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRSHPD 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQST + Sbjct: 116 TVLIGPNCPGVITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQSTCI 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K KKP+VG Sbjct: 176 GIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKQFV----KKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L+ Sbjct: 232 FIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAALV 287 >gi|302898208|ref|XP_003047801.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256728732|gb|EEU42088.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 329 Score = 311 bits (797), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 165/293 (56%), Positives = 221/293 (75%), Gaps = 6/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T+VVGG +PKK T ++++PVF Sbjct: 32 NLRINGDTKVIYQGFTGKQGTFHAQQAIEYG-TKVVGGTNPKKAGTT----HLDLPVFKN 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V++A + T A A+ ++VPP A I E++EAEIPL+VCITEGIP DMVR+ L+ ++ Sbjct: 87 VSDAVKATGATATALFVPPPVAAAGIEEALEAEIPLVVCITEGIPQHDMVRITDMLKSQN 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 147 KTRLVGPNCPGIIAPEQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++F D T+ I+M+GEIGGSAEE+AA+FLK KP+V Sbjct: 207 VGIGGDPFSGTNFIDCLKVFTEDPDTDGIIMIGEIGGSAEEDAAEFLKQANTVQGGKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG +APPGR MGHAGA++SGGKGGA+ KI A+++AG+ + SPA +G++L Sbjct: 267 SFIAGISAPPGRRMGHAGAIVSGGKGGADTKIKALEDAGVIVERSPAGLGKAL 319 >gi|262198320|ref|YP_003269529.1| succinyl-CoA synthetase, subunit alpha [Haliangium ochraceum DSM 14365] gi|262081667|gb|ACY17636.1| succinyl-CoA synthetase, alpha subunit [Haliangium ochraceum DSM 14365] Length = 293 Score = 311 bits (796), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 170/300 (56%), Positives = 221/300 (73%), Gaps = 10/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHP-KKGSTYWTGGNVNVPVF 59 MS+LV +T+++VQG+TG AG FHT QA+ Y T VV G+ P KKG+ G VPVF Sbjct: 1 MSVLVGNDTRLVVQGMTGSAGAFHTRQAMEY-GTNVVAGVTPGKKGAKVE--GLEKVPVF 57 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-- 117 + EA ANASV+YVPP A DAI+E+ A IPLI+ ITEGIP DM+RVK L Sbjct: 58 DSCEEAVREAGANASVVYVPPPFAADAIMEAAAAGIPLIIAITEGIPAHDMIRVKTMLAA 117 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++ LIGPNCPGI+TP+ CKIGIMPG I +KG+VG++SRSGTLTYE V Q S GLGQ Sbjct: 118 DHPNTVLIGPNCPGIITPEECKIGIMPGYIHKKGNVGVVSRSGTLTYEVVHQLSALGLGQ 177 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 STA+GIGGDPVKG +FI+ ++LF D TE+I ++GEIGGS+EE+AA ++K+ KK Sbjct: 178 STAIGIGGDPVKGLDFIECVKLFNEDPETEAIFLIGEIGGSSEEDAAAYIKEHV----KK 233 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+ F+AG+TAPPG+ MGHAGA+ISGGKG A KI A++ A I ++P+PA +G +L ++L Sbjct: 234 PVAAFIAGQTAPPGKRMGHAGAIISGGKGTASAKIEALQAANIAVSPTPAEMGTTLQKIL 293 >gi|195337228|ref|XP_002035231.1| GM14589 [Drosophila sechellia] gi|194128324|gb|EDW50367.1| GM14589 [Drosophila sechellia] Length = 328 Score = 311 bits (796), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 173/300 (57%), Positives = 231/300 (77%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLNGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 VAEAK+ T +A+VIYVPP GA AIIE++EAEIPLIVCITEG+P DMV+VK A + +S Sbjct: 86 VAEAKKATDPHATVIYVPPPGAAAAIIEALEAEIPLIVCITEGVPQHDMVKVKHALISQS 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLTEYNSGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 266 SFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKEMKRL 325 >gi|28574296|ref|NP_523905.2| succinyl coenzyme A synthetase alpha subunit, isoform A [Drosophila melanogaster] gi|320545545|ref|NP_001189044.1| succinyl coenzyme A synthetase alpha subunit, isoform B [Drosophila melanogaster] gi|195587550|ref|XP_002083524.1| GD13780 [Drosophila simulans] gi|41019545|sp|Q94522|SUCA_DROME RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor gi|19528345|gb|AAL90287.1| LD24889p [Drosophila melanogaster] gi|28380437|gb|AAF47796.2| succinyl coenzyme A synthetase alpha subunit, isoform A [Drosophila melanogaster] gi|194195533|gb|EDX09109.1| GD13780 [Drosophila simulans] gi|220953812|gb|ACL89449.1| Scsalpha-PA [synthetic construct] gi|318069129|gb|ADV37481.1| succinyl coenzyme A synthetase alpha subunit, isoform B [Drosophila melanogaster] Length = 328 Score = 311 bits (796), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 173/300 (57%), Positives = 231/300 (77%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLNGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 VAEAK+ T +A+VIYVPP GA AIIE++EAEIPLIVCITEG+P DMV+VK A + +S Sbjct: 86 VAEAKKATDPHATVIYVPPPGAAAAIIEALEAEIPLIVCITEGVPQHDMVKVKHALISQS 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLTEYNSGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 266 SFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKEMKRL 325 >gi|74316824|ref|YP_314564.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Thiobacillus denitrificans ATCC 25259] gi|74056319|gb|AAZ96759.1| succinyl-CoA ligase, alpha subunit [Thiobacillus denitrificans ATCC 25259] Length = 297 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 173/305 (56%), Positives = 230/305 (75%), Gaps = 15/305 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDK+TKV+ QG TGK G+FH+EQAI Y T++VGG+ P KG ++N+PVF Sbjct: 1 MSILVDKDTKVICQGFTGKQGSFHSEQAIAY-GTRMVGGVTPGKGGQT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ 114 TV +A T A A++IYVP + A D+I+E+ +A I +IVCITEGIPVLDM++VK Sbjct: 56 TVRDAVRETGAQATMIYVPAAFAADSILEAADAGIEVIVCITEGIPVLDMLQVKTALNVK 115 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 A L+ + ++LIGPNCPGI+T CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q G Sbjct: 116 AALKANGAKLIGPNCPGIITSGECKIGIMPGVIHQKGRIGIVSRSGTLTYEAVHQTTQLG 175 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 LGQST VGIGGDP+KG +FID LE+F AD TE++++VGEIGGS+EEEAA+++ Sbjct: 176 LGQSTCVGIGGDPIKGLDFIDCLEMFEADPQTEAVILVGEIGGSSEEEAAEYIHTR---- 231 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KKP+ ++AG+TAP G+ MGHAGA+I+GG G A+ KI A++ AG+ +A SPA +G ++ Sbjct: 232 MKKPVAAYIAGRTAPKGKRMGHAGAIIAGGAGTADAKIRALEAAGVVVAQSPAGLGEAVQ 291 Query: 295 ELLGS 299 LG+ Sbjct: 292 LALGA 296 >gi|46110296|ref|XP_382206.1| hypothetical protein FG02030.1 [Gibberella zeae PH-1] Length = 329 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 167/293 (56%), Positives = 217/293 (74%), Gaps = 6/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH EQAI Y T+VVGG +PKK G +PVF Sbjct: 32 NLRINSDTKVIYQGFTGKQGTFHAEQAIEYG-TKVVGGTNPKKAGQTHLG----LPVFKN 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V+EA + T A A+ ++VPP A I E++EAEIPL+VCITEGIP DMVR+ L+ + Sbjct: 87 VSEAVKATGATATGLFVPPPLAAAGIEEALEAEIPLVVCITEGIPQHDMVRITDMLKTQD 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 147 KTRLVGPNCPGIIAPEQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++F D T+ I+M+GEIGGSAEE+AA+FLK KP+V Sbjct: 207 VGIGGDPFSGTNFIDCLKVFTEDPNTDGIIMIGEIGGSAEEDAAEFLKQANTVNGGKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG +APPGR MGHAGA++SGGKGGA+ KI A+++AG+ + SPA +G++L Sbjct: 267 SFIAGISAPPGRRMGHAGAIVSGGKGGADTKIKALEDAGVIVERSPAGLGKAL 319 >gi|163783580|ref|ZP_02178570.1| succinyl-CoA ligase alpha subunit [Hydrogenivirga sp. 128-5-R1-1] gi|159881200|gb|EDP74714.1| succinyl-CoA ligase alpha subunit [Hydrogenivirga sp. 128-5-R1-1] Length = 305 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 166/302 (54%), Positives = 224/302 (74%), Gaps = 11/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVDKNTKV+VQG+TGK G+FH Q Y TQVV G+ P K G +PVF Sbjct: 1 MAILVDKNTKVVVQGITGKEGSFHATQCKAY-GTQVVAGVTPGKAGQEVEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T AN S+I+VP A DAI+E++++ I L+VCITEGIPV DM+ VK ++K+ Sbjct: 56 TVEDAVKETGANCSLIFVPAPFAADAIVEALDSGIELVVCITEGIPVKDMMMVKDYMKKA 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +++LIGPNCPG++TP K+GIMPG IFR+G VGI+SRSGTLTYEA +Q +Q G+GQ+ Sbjct: 116 YPNAKLIGPNCPGLITPGEAKVGIMPGHIFRRGKVGIVSRSGTLTYEAAYQLTQLGMGQT 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV G DV+ELF D TE+I+M+GEIGG+AEEEAA+F++ KP Sbjct: 176 TAVGIGGDPVHGLSHRDVIELFNEDPETEAILMIGEIGGTAEEEAAEFIESNV----DKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + ++AG TAPPG+ MGHAGA+I GGKG A+ K++A+++AG + +PA+IG ++ ++LG Sbjct: 232 VFAYIAGITAPPGKRMGHAGAIIMGGKGTAQAKMSALEKAGAYVIDNPAKIGETVAKILG 291 Query: 299 SL 300 L Sbjct: 292 VL 293 >gi|194749361|ref|XP_001957107.1| GF24225 [Drosophila ananassae] gi|190624389|gb|EDV39913.1| GF24225 [Drosophila ananassae] Length = 328 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 173/300 (57%), Positives = 230/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLTSDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 VAEAK+ T +A+VIYVPP GA AIIE++EAEIPLIVCITEG+P DMV+VK A + +S Sbjct: 86 VAEAKKATDPHATVIYVPPPGAAAAIIEALEAEIPLIVCITEGVPQHDMVKVKHALISQS 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLTEYNSGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 266 SFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKEMKRL 325 >gi|152990586|ref|YP_001356308.1| succinyl-CoA synthase, alpha subunit [Nitratiruptor sp. SB155-2] gi|151422447|dbj|BAF69951.1| succinyl-CoA synthase, alpha subunit [Nitratiruptor sp. SB155-2] Length = 290 Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 161/298 (54%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+VQG TGK GTFH+EQ I Y TQ+VGG+ P KG +++ PVF Sbjct: 1 MSILVNKDTKVIVQGFTGKEGTFHSEQCIEYG-TQIVGGVTPGKGGQT----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A S+I+VPP+ DA++E+ +A I L V ITEG PV DM+ K K Sbjct: 56 TVKEAVDATGATVSMIFVPPAFTADAVMEAADAGIELAVIITEGAPVKDMMYAKMYATKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + IGPNCPGI+T + CKIGIMPG IF+KG VG++S+SGTLTYEA Q +EG G +TA Sbjct: 116 GMKTIGPNCPGIITAEECKIGIMPGFIFKKGPVGLISKSGTLTYEASNQVVKEGYGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + +L +F AD TE+IVM+GEIGG+ E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLSYKQLLPMFEADPETEAIVMIGEIGGTLEIEAAEFIKENI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG+TAP G+ MGHAGA+ISGG+G A++K++A+ AG+ + SPA IG+++ ++LG Sbjct: 232 AFIAGQTAPKGKRMGHAGAIISGGQGTAQEKMDALAAAGVHVVKSPADIGKTVAKVLG 289 >gi|52138570|ref|NP_001002577.2| succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Danio rerio] gi|51858988|gb|AAH81520.1| Succinate-CoA ligase, GDP-forming, alpha subunit [Danio rerio] gi|182891226|gb|AAI64126.1| Suclg1 protein [Danio rerio] Length = 324 Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 171/295 (57%), Positives = 223/295 (75%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++KNTKV+ +G TGK GTFH++Q++ Y +Q+VGG+ P KG G +PVF + Sbjct: 27 NLYINKNTKVICRGFTGKQGTFHSQQSLDY-GSQLVGGVSPGKGGKTHLG----LPVFNS 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAK+ T A A+VIYVPP A AIIE+I+AE+PL VCITEGIP DMVRVK RL ++ Sbjct: 82 VKEAKDGTGAEATVIYVPPPFAAAAIIEAIDAEMPLAVCITEGIPQQDMVRVKHRLLRQN 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 142 KTRLVGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D TE I+++GEIGG AEE AA++LK KP+V Sbjct: 202 IGIGGDPFNGTNFIDCLEVFLQDPKTEGIILIGEIGGDAEENAAEYLKQHNSGANAKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 262 SFIAGLTAPPGRRMGHAGAFIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTIFK 316 >gi|324512857|gb|ADY45309.1| Succinyl-CoA ligase [GDP-forming] subunit alpha [Ascaris suum] Length = 325 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 167/295 (56%), Positives = 219/295 (74%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++++ NTKV++QGLTGK GTFH ++ I Y T VVGG+ P K T G PVF + Sbjct: 21 NLMIGSNTKVIIQGLTGKEGTFHGKKMIEY-NTNVVGGVSPNKAGTKHLG----RPVFGS 75 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V +A+E+T A+ASVI+VP + A AI E+I+AEIPL+VCITEGIP M+ +K +L + Sbjct: 76 VKDAREKTGADASVIFVPAAFAASAIEEAIDAEIPLVVCITEGIPQHQMIHIKKKLLNQD 135 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P+ CKIGIMPG+I +KG VGI+SRSGTLTYEAV Q+S GLGQ+ Sbjct: 136 KTRLLGPNCPGIIKPEECKIGIMPGNIHQKGVVGIVSRSGTLTYEAVQQSSNVGLGQTLC 195 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT F+D L +FL D T I+++GEIGG EEEAA+FLK+ + KP+V Sbjct: 196 IGIGGDPFNGTNFVDALHVFLNDPNTHGIILIGEIGGEDEEEAAKFLKEYNCGEQSKPVV 255 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG+TAPPGR MGHAGA+ISGGKG A KI A+KEAG+ ++ SPA++G + E Sbjct: 256 SFIAGQTAPPGRRMGHAGAIISGGKGTANGKIEALKEAGVIVSKSPAQMGELIAE 310 >gi|224050291|ref|XP_002188424.1| PREDICTED: succinate-CoA ligase, GDP-forming, alpha subunit [Taeniopygia guttata] Length = 331 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 176/295 (59%), Positives = 227/295 (76%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V+KNTKV+ QG TGK GTFH++QA+ Y T +VGGI P KG G +PVF + Sbjct: 34 NLYVNKNTKVICQGFTGKQGTFHSQQALEY-GTNLVGGISPGKGGKTHLG----LPVFNS 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A+A+VIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL ++ Sbjct: 89 VKEAKEQTGASATVIYVPPPFAAAAINEAIDAEMPLVVCITEGIPQQDMVRVKHRLLRQN 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 149 KTRLVGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSFC 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D TE I+++GEIGG+AEE+AA FLK+ KP+V Sbjct: 209 VGIGGDPFNGTNFIDCLDVFLKDPRTEGIILIGEIGGNAEEDAAAFLKENNAGPNAKPVV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 269 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTIYK 323 >gi|91087643|ref|XP_973269.1| PREDICTED: similar to succinyl-CoA synthetase small subunit, putative [Tribolium castaneum] gi|270010712|gb|EFA07160.1| hypothetical protein TcasGA2_TC010157 [Tribolium castaneum] Length = 622 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 162/290 (55%), Positives = 212/290 (73%), Gaps = 6/290 (2%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + K +K++ QG TGK TFH E+A+ Y T +VGG+ P KG G +PVF TV E Sbjct: 21 LTKASKLICQGFTGKQATFHCERALEY-GTLLVGGVTPGKGGKKHLG----LPVFNTVKE 75 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS-SR 123 A++ + S+IYVPP A A+ E++EAEIPLIVCITEGIP DMV+ + RL + SR Sbjct: 76 ARDALKPDVSIIYVPPFAATKALHEALEAEIPLIVCITEGIPQHDMVKFRYRLSRQDKSR 135 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPNCPGI+ P+ CK+GIMP I ++G +GI+SRSGTLTYEAV QT++ GLGQ+ VGI Sbjct: 136 LVGPNCPGIIAPEQCKVGIMPAMIHKRGCIGIVSRSGTLTYEAVNQTTKHGLGQTLVVGI 195 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDP GT FID L++FL D T+ I+++GEIGG AEEEAA+FLK ++KP+V ++ Sbjct: 196 GGDPYNGTNFIDCLDIFLKDPDTKGIILIGEIGGCAEEEAAEFLKKNNTGDKRKPVVSYI 255 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 AG +APPGR MGHAGA+ISGGKGGA +K+ A++ AG+ IA SPA +G L Sbjct: 256 AGLSAPPGRRMGHAGAIISGGKGGAPEKMAALRNAGVIIANSPALMGDHL 305 >gi|71896153|ref|NP_001025589.1| succinate-CoA ligase, GDP-forming alpha subunit [Xenopus (Silurana) tropicalis] gi|60551746|gb|AAH91038.1| succinate-CoA ligase, alpha subunit [Xenopus (Silurana) tropicalis] Length = 325 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 176/292 (60%), Positives = 227/292 (77%), Gaps = 6/292 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DK+T+V+ QG TGK GTFH++QA+ Y T++VGG+ P KG + G +PVF +V Sbjct: 29 LYIDKDTRVICQGFTGKQGTFHSQQALEY-GTKLVGGVSPGKGGSAHLG----LPVFNSV 83 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 AEAKE T A ASVIYVPP A AI E+I+AEI L+VCITEGIP DMVRVK RL +++ Sbjct: 84 AEAKEATGATASVIYVPPPFAAAAIHEAIDAEISLVVCITEGIPQQDMVRVKHRLLRQTT 143 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 144 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 203 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID L++FL+D TE I+++GEIGGSAEE AA+FL+ KP+V Sbjct: 204 GIGGDPFNGTNFIDCLDVFLSDPKTEGIILIGEIGGSAEENAAEFLRTNNAGPNAKPVVS 263 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A+++AG+ ++ SPA++G ++ Sbjct: 264 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQKAGVVVSMSPAQLGSTM 315 >gi|291279314|ref|YP_003496149.1| succinyl-CoA synthase subunit alpha [Deferribacter desulfuricans SSM1] gi|290754016|dbj|BAI80393.1| succinyl-CoA synthase, alpha subunit [Deferribacter desulfuricans SSM1] Length = 290 Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 157/299 (52%), Positives = 219/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+VQG+TG+ G+FH EQ + Y T++VGG+ P KG T G VPVF Sbjct: 1 MSILVNKDTKVIVQGITGREGSFHAEQCMAY-GTKIVGGVTPGKGGTEHLG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A S+++VPP+ DAI+E+ +A I LIV ITEG PV DM+ K L+ Sbjct: 56 TVEEAVKTTGATVSLVFVPPAFVADAIMEAADAGIELIVAITEGTPVKDMMYAKEYLKHR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+TP+ CKIGIMPG IF+KG VG++S+SGTLTYEA Q ++GLG STA Sbjct: 116 KVKMIGPNCPGIITPEECKIGIMPGFIFKKGPVGLISKSGTLTYEASNQIVKQGLGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L++F D T++IVM+GEIGG E +AA+++K+ KP+V Sbjct: 176 VGIGGDPIIGLSYKELLQMFEEDPETKAIVMIGEIGGDLEIQAAEYIKENI----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP G+ MGHAGA++SG KG A++K++A+ AG+ + SPA IG ++ ++L + Sbjct: 232 AFIAGQTAPKGKRMGHAGAIVSGSKGTAKEKMDALSAAGVHVVVSPAEIGETVAKVLSN 290 >gi|238231573|ref|NP_001153970.1| succinate-CoA ligase GDP-forming alpha subunit [Oncorhynchus mykiss] gi|223049433|gb|ACM80356.1| succinate-CoA ligase GDP-forming alpha subunit [Oncorhynchus mykiss] Length = 324 Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 173/295 (58%), Positives = 227/295 (76%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +DK+TKV+ QG TGK GTFH++QAI Y +++VGG+ P KG G VPVF + Sbjct: 27 NLYIDKDTKVICQGFTGKQGTFHSQQAIDY-GSRLVGGVSPGKGGRTHLG----VPVFNS 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA+E T A A+VIYVPP AG AIIE+I+A +PL+VCITEGIP DMV+VK +L +S Sbjct: 82 VKEAREGTGAEATVIYVPPPFAGAAIIEAIDAGMPLVVCITEGIPQQDMVKVKHKLLRQS 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 142 TTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D T+ I+++GEIGG+AEE AA +LK KP+V Sbjct: 202 IGIGGDPFNGTNFIDCLEVFLQDPKTDGIILIGEIGGNAEENAADYLKQHNSGANAKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A+++AG+ ++ SPA++G ++ + Sbjct: 262 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQQAGVVVSMSPAQLGSTMFK 316 >gi|197122637|ref|YP_002134588.1| succinyl-CoA synthetase, subunit alpha [Anaeromyxobacter sp. K] gi|196172486|gb|ACG73459.1| succinyl-CoA synthetase, alpha subunit [Anaeromyxobacter sp. K] Length = 341 Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 172/298 (57%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD+NT+VLVQG+TG AG+FH EQ + Y T VV G+ P +G T + G VP+F Sbjct: 1 MSILVDRNTRVLVQGITGSAGSFHAEQMLAYG-TNVVAGVTPNRGGTRFQG---TVPIFH 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TVA A + T ANA+ I+VPP A DAIIE+ E++I LIV ITEGIPVLDMVRV+ +E + Sbjct: 57 TVAAAVKETGANAAAIFVPPPFAADAIIEAAESDIELIVAITEGIPVLDMVRVRRYVESR 116 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPG++TP CKIGIMPG + R G +G++SRSGTL YEAV Q S GLGQST Sbjct: 117 PKTRLVGPNCPGVITPGQCKIGIMPGHVHRPGRIGVVSRSGTLNYEAVKQLSDLGLGQST 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +VGIGGDPV GT+F+ L+LF D T++++M+GEIGG EE+ A+F++D KP+ Sbjct: 177 SVGIGGDPVHGTDFVQALQLFEDDPETDAVIMIGEIGGGEEEKGAEFVRDHM----TKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPG+ MGHAGAVISGG G A+ K+ AM+EAGI + P +GR++ + L Sbjct: 233 VGFIAGRTAPPGKRMGHAGAVISGGAGTADAKMAAMREAGIVVVDGPHLLGRAMKDAL 290 >gi|71275181|ref|ZP_00651468.1| Succinyl-CoA ligase, alpha subunit [Xylella fastidiosa Dixon] gi|71899819|ref|ZP_00681969.1| Succinyl-CoA ligase, alpha subunit [Xylella fastidiosa Ann-1] gi|170731174|ref|YP_001776607.1| succinyl-CoA synthetase subunit alpha [Xylella fastidiosa M12] gi|71163990|gb|EAO13705.1| Succinyl-CoA ligase, alpha subunit [Xylella fastidiosa Dixon] gi|71730410|gb|EAO32491.1| Succinyl-CoA ligase, alpha subunit [Xylella fastidiosa Ann-1] gi|167965967|gb|ACA12977.1| succinyl-CoA synthetase, alpha subunit [Xylella fastidiosa M12] Length = 290 Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 214/298 (71%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG ++++PVF Sbjct: 1 MSVLVNKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGNT----HIDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A+ASVIYVPP A DAI+E+ A I +IV ITEGIPVLDM+RVK L+ S Sbjct: 56 TVCEAVQNTGADASVIYVPPPFAADAILEAAAAGIKVIVAITEGIPVLDMLRVKNVLKAS 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PEITLIGPNCPGVITPGECKIGIMPGHIHKPGHIGIVSRSGTLTYEAVKQTTDVGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G F+D L+LF D T+ I+MVGEIGG AEE A+++K KKP+ Sbjct: 176 CIGIGGDPINGLNFVDALKLFNNDPQTKGIIMVGEIGGDAEEAGAEYIKHHV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG +AP G+ MGHAGA+ SGG G AE K AM++AGI SP +G ++ L+ Sbjct: 232 VGFIAGASAPKGKRMGHAGAIASGGSGTAEGKFAAMEKAGIKTVRSPGDLGAAIASLV 289 >gi|15839137|ref|NP_299825.1| succinyl-CoA synthetase subunit alpha [Xylella fastidiosa 9a5c] gi|9107757|gb|AAF85345.1|AE004061_10 succinyl-CoA synthetase, alpha subunit [Xylella fastidiosa 9a5c] Length = 290 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 214/298 (71%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG ++++PVF Sbjct: 1 MSVLVNKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGNT----HIDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A+ASVIYVPP A DAI+E+ A I +IV ITEGIPVLDM+RVK L+ S Sbjct: 56 TVREAVQNTGADASVIYVPPPFAADAILEAAAAGIKVIVAITEGIPVLDMLRVKNVLKAS 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PEITLIGPNCPGVITPGECKIGIMPGHIHKPGHIGIVSRSGTLTYEAVKQTTDVGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G F+D L+LF D T+ I+MVGEIGG AEE A+++K KKP+ Sbjct: 176 CIGIGGDPINGLNFVDALKLFNNDPQTKGIIMVGEIGGDAEEAGAEYIKHHV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG +AP G+ MGHAGA+ SGG G AE K AM++AGI SP +G ++ L+ Sbjct: 232 VGFIAGASAPKGKRMGHAGAIASGGSGTAEGKFAAMEKAGIKTVRSPGDLGAAIASLV 289 >gi|224587121|gb|ACN58607.1| Succinyl-CoA ligase subunit alpha, mitochondrial precursor [Salmo salar] Length = 325 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 173/295 (58%), Positives = 227/295 (76%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +DK+TKV+ QG TGK GTFH++QAI Y +++VGG+ P KG G VPVF + Sbjct: 28 NLYIDKDTKVICQGFTGKQGTFHSQQAIDY-GSRLVGGVSPGKGGRTHLG----VPVFNS 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA+E T A A+VIYVPP AG AIIE+I+A +PL+VCITEGIP DMV+VK +L +S Sbjct: 83 VKEAREGTGAEATVIYVPPPFAGAAIIEAIDAGMPLVVCITEGIPQQDMVKVKHKLLRQS 142 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 143 TTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 202 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D T+ I+++GEIGG+AEE AA +LK KP+V Sbjct: 203 IGIGGDPFNGTNFIDCLEVFLQDPKTDGIILIGEIGGNAEENAADYLKQHNSGANAKPVV 262 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A+++AG+ ++ SPA++G ++ + Sbjct: 263 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQQAGVVVSMSPAQLGSTMFK 317 >gi|254468446|ref|ZP_05081852.1| succinyl-CoA ligase, alpha subunit [beta proteobacterium KB13] gi|207087256|gb|EDZ64539.1| succinyl-CoA ligase, alpha subunit [beta proteobacterium KB13] Length = 291 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 159/294 (54%), Positives = 206/294 (70%), Gaps = 9/294 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVD T+++ QG TGK GTFH+EQ + Y + G ++ +PVF Sbjct: 1 MSVLVDSKTRLICQGFTGKQGTFHSEQCLNYGTN-----LVGGVTPGKGGGKHLKLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T ANA++IYVPP+ A D+IIE+ EA I +IVCITEGIP DM++VK+ + + Sbjct: 56 TVKEAVNQTQANATMIYVPPAFAADSIIEASEAGIEIIVCITEGIPTFDMLKVKSIINSN 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPGI+TP CKIGIMPGSI G +GI+SRSGTLTYEAV QT+ LGQST Sbjct: 116 RSILIGPNCPGIITPGECKIGIMPGSIHLPGKIGIVSRSGTLTYEAVNQTTNNKLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+KG FI+ L+ F D T I++VGEIGGS EEEAA ++K++ KP+ Sbjct: 176 IGIGGDPIKGLNFIECLDFFENDPDTHGIILVGEIGGSDEEEAADYIKEKI----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 ++AG TAP G+ MGHAGA+IS G A DKINA+++AG IA SPA IG +++ Sbjct: 232 SYIAGMTAPEGKRMGHAGAIISKTSGKAIDKINALRKAGAVIANSPAEIGDAIL 285 >gi|17545274|ref|NP_518676.1| succinyl-CoA synthetase subunit alpha [Ralstonia solanacearum GMI1000] gi|17427565|emb|CAD14083.1| probable succinyl-coa synthetase alpha chain protein [Ralstonia solanacearum GMI1000] Length = 293 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 160/301 (53%), Positives = 218/301 (72%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK++T A SVIYVPP+GA AI E+++A++ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YASVKEAKDQTGATVSVIYVPPAGAAAAIWEAVDADLDLVVCITEGIPVRDMMEVKDKMR 116 Query: 119 KS--SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K ++ L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KQNKTTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA+++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAARWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+E GI +P+ +GR L L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEECGIKATKNPSEMGRLLKAL 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|71006306|ref|XP_757819.1| hypothetical protein UM01672.1 [Ustilago maydis 521] gi|46097056|gb|EAK82289.1| hypothetical protein UM01672.1 [Ustilago maydis 521] Length = 330 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 169/291 (58%), Positives = 218/291 (74%), Gaps = 7/291 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L++K+++V+ QG TGK GTFH +QA+ Y T++VGG+ PKK G +PVF + Sbjct: 32 NLLINKDSRVICQGFTGKTGTFHCQQALEY-GTKLVGGVSPKKAGQTHLG----LPVFGS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA T +ASV+YVPP GA DAIIE+IE E+PLIV ITEGIP D +RV A L +S Sbjct: 87 VKEAVRETKPHASVLYVPPPGAADAIIEAIENEVPLIVAITEGIPQKDEIRVAAALRSQS 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 147 KSRLVGPNCPGIINPEGCKIGIMPGHIHTPGRIGIVSRSGTLTYEAVNQTTQVGLGQSLC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL-KDEAKRGRKKPI 239 VGIGGDP G+ +D+++L L + +E IV++GEIGGS EE+AA++L K R KP+ Sbjct: 207 VGIGGDPFPGSTTLDLVKLLLDHDKSEGIVLIGEIGGSMEEDAAEYLAKYNKTRANPKPV 266 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 V F+AG+TAPPGR MGHAGA+I+GGKGGA+DK+ A+ EAG +A SPA+IG Sbjct: 267 VAFIAGRTAPPGRRMGHAGAIIAGGKGGADDKVKALTEAGAIVADSPAKIG 317 >gi|119498529|ref|XP_001266022.1| succinyl-CoA synthetase alpha subunit, putative [Neosartorya fischeri NRRL 181] gi|119414186|gb|EAW24125.1| succinyl-CoA synthetase alpha subunit, putative [Neosartorya fischeri NRRL 181] Length = 331 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 173/294 (58%), Positives = 220/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKVL QG TGK GTFH EQAI Y T+VVGG +PKK T +++ PVF Sbjct: 36 NLRINADTKVLFQGFTGKQGTFHAEQAIAYG-TKVVGGTNPKKAGTM----HLDRPVFAN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V+EA + T A AS I+VPP A I E+I AE+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 91 VSEAVKETGATASAIFVPPPLAAAGIEEAIAAEVPLVVCITEGIPQHDMVRITDILKTQN 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+F K A KP V Sbjct: 211 VGIGGDPFSGTNFIDCLKIFLEDEETDGIIMIGEIGGSAEEDAAEFFK--ANNKHNKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L+ Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALESAGVTVERSPAHLGKTLL 322 >gi|162457427|ref|YP_001619794.1| succinate--CoA ligase (ADP-forming) [Sorangium cellulosum 'So ce 56'] gi|161168009|emb|CAN99314.1| Succinate--CoA ligase (ADP-forming) [Sorangium cellulosum 'So ce 56'] Length = 293 Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 157/290 (54%), Positives = 208/290 (71%), Gaps = 8/290 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+T+V+ QG+TG G+ H I Y T+VV G+ P +G + VP+F Sbjct: 1 MSILVNKDTRVVFQGITGAYGSQHARACIEY-GTKVVAGVTPGRGGQRFED---KVPIFD 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A A S I+VPP GA DAI E+I+A L++CIT+G+PVLDM+RV+ LE Sbjct: 57 TVEQAVRNEGAEVSCIFVPPVGAADAITEAIDAGCKLVICITDGVPVLDMIRVRRFLEGK 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I +KG +G+LSRSGTLTYEAV Q S G+GQS+ Sbjct: 117 PARLIGPNCPGVITPGECKIGIMPGHIHKKGHIGVLSRSGTLTYEAVGQLSALGIGQSSC 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV G +FIDVLELF D T +V++GEIGG+AE+ AA ++ K+ KKP+ Sbjct: 177 VGIGGDPVGGMDFIDVLELFNQDPDTHGVVLIGEIGGTAEQRAAAWI----KKNMKKPVA 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 F+AG+ APPG+ MGHAGA+I+GG+G A +KI A++ AG +A +PA +G Sbjct: 233 AFIAGRAAPPGKRMGHAGAIIAGGEGTAAEKIAALEAAGAKVAATPAEMG 282 >gi|220917420|ref|YP_002492724.1| succinyl-CoA synthetase, alpha subunit [Anaeromyxobacter dehalogenans 2CP-1] gi|219955274|gb|ACL65658.1| succinyl-CoA synthetase, alpha subunit [Anaeromyxobacter dehalogenans 2CP-1] Length = 341 Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 172/298 (57%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD+NT+VLVQG+TG AG+FH EQ + Y T VV G+ P +G T + G VP+F Sbjct: 1 MSILVDRNTRVLVQGITGSAGSFHAEQMLAYG-TNVVAGVTPNRGGTRFQG---TVPIFH 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TVA A + T ANA+ I+VPP A DAIIE+ E++I LIV ITEGIPVLDMVRV+ +E + Sbjct: 57 TVAAAVKETGANAAAIFVPPPFAADAIIEAAESDIELIVAITEGIPVLDMVRVRRYVESR 116 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPG++TP CKIGIMPG + R G +G++SRSGTL YEAV Q S GLGQST Sbjct: 117 PKTRLVGPNCPGVITPGQCKIGIMPGHVHRPGRIGVVSRSGTLNYEAVKQLSDLGLGQST 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +VGIGGDPV GT+F+ L+LF D T++++M+GEIGG EE+ A+F++D KP+ Sbjct: 177 SVGIGGDPVHGTDFVQALQLFEDDPETDAVIMIGEIGGGEEEKGAEFVRDHM----TKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPG+ MGHAGAVISGG G A+ K+ AM+EAGI + P +GR++ + L Sbjct: 233 VGFIAGRTAPPGKRMGHAGAVISGGAGTADAKMAAMREAGIVVVDGPHLLGRAMKDAL 290 >gi|71029306|ref|XP_764296.1| succinyl-CoA synthetase subunit alpha [Theileria parva strain Muguga] gi|68351250|gb|EAN32013.1| succinyl-CoA synthetase, alpha subunit, putative [Theileria parva] Length = 329 Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 159/299 (53%), Positives = 218/299 (72%), Gaps = 7/299 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--GNVNVPVFT 60 + +DK+TK++ QGLTGK +FHT + + Y T+ VGG++PKKG + W +P+F+ Sbjct: 31 VYIDKDTKIICQGLTGKQASFHTTECLKYYGTKFVGGVNPKKGGSSWKSLDDKHTLPIFS 90 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V+EAK+ T A+ASVIYVPP GA DAI+E+IEAE+PL++CITEGIP DMV+VK L+ Sbjct: 91 SVSEAKKETGADASVIYVPPPGAADAIVEAIEAELPLVICITEGIPQHDMVKVKTLLKDP 150 Query: 121 SSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPGI+ P+ CKIGIMPG I +KG VGI+SRSGTLTYEAV QT++ GLGQS Sbjct: 151 YCKTTLIGPNCPGIIKPEECKIGIMPGHIHKKGVVGIISRSGTLTYEAVTQTTEIGLGQS 210 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GIGGDP G F D ++ F+ + T+ I+++GEIGG+AEE+ A ++K KP Sbjct: 211 VCIGIGGDPFGGITFTDAMKKFVKNPETKGILIIGEIGGTAEEDVADWIKANP---TDKP 267 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +V +AG +APPG+ MGHAGA+ISG KG A KI A+++AG+ + SPA +G ++ L Sbjct: 268 VVAIIAGISAPPGKRMGHAGAIISGNKGTAHGKIEALRDAGVVVPNSPAEMGLAMFNAL 326 >gi|149635493|ref|XP_001507019.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 388 Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 176/295 (59%), Positives = 223/295 (75%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V+K TKV+ QG TGK GTFH++QA+ Y T +VGG P KG G +PVF T Sbjct: 91 NLYVNKTTKVICQGFTGKQGTFHSQQALDY-GTNLVGGTSPGKGGKTHLG----LPVFNT 145 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EAKE+T A ASVIYVPP A AI E++EAE+PL+VCITEGIP DMVRVK L + S Sbjct: 146 VKEAKEQTGATASVIYVPPPFAAAAINEAVEAEMPLVVCITEGIPQQDMVRVKHSLTRQS 205 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 206 KTRLVGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSFC 265 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID LE+FL D +TE I+++GEIGG+AEE+AA +LK KP+V Sbjct: 266 VGIGGDPFNGTNFIDCLEVFLKDPSTEGIILIGEIGGNAEEDAAAYLKQHNSGPNAKPVV 325 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 326 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTMYK 380 >gi|4104377|gb|AAD02018.1| ATP-specific succinyl-CoA synthetase alpha subunit [Columba livia] gi|4104379|gb|AAD02019.1| GTP-specific succinyl-CoA synthetase alpha subunit [Columba livia] Length = 306 Score = 308 bits (790), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 175/295 (59%), Positives = 225/295 (76%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + KNTKV+ QG TGK GTFH++QA+ Y T +VGGI P KG G +PVF + Sbjct: 9 NLYISKNTKVICQGFTGKQGTFHSQQALDY-GTNLVGGISPGKGGKTHLG----LPVFNS 63 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A+A+VIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL + Sbjct: 64 VKEAKEQTGASATVIYVPPPFAAAAINEAIDAEMPLVVCITEGIPQQDMVRVKHRLVRQD 123 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QTSQ GLGQS Sbjct: 124 KTRLVGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTSQVGLGQSLC 183 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++FL D TE I+++GEIGG+AEE+AA FLK+ KP+V Sbjct: 184 IGIGGDPFNGTNFIDCLDVFLKDPHTEGIILIGEIGGNAEEDAAAFLKENNSGPNAKPVV 243 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 244 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQNAGVVVSMSPAQLGSTIYK 298 >gi|329943125|ref|ZP_08291899.1| succinate-CoA ligase, alpha subunit [Chlamydophila psittaci Cal10] gi|332287708|ref|YP_004422609.1| succinyl-CoA synthase subunit alpha [Chlamydophila psittaci 6BC] gi|313848282|emb|CBY17283.1| succinyl-CoA synthetase alpha chain [Chlamydophila psittaci RD1] gi|325506919|gb|ADZ18557.1| succinyl-CoA synthase subunit alpha [Chlamydophila psittaci 6BC] gi|328814672|gb|EGF84662.1| succinate-CoA ligase, alpha subunit [Chlamydophila psittaci Cal10] gi|328914961|gb|AEB55794.1| succinyl-Coa synthetase, alpha chain [Chlamydophila psittaci 6BC] Length = 291 Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 167/300 (55%), Positives = 217/300 (72%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M + KNT ++ QG+TGKAG+FHTEQ + Y + VGG+ P KG T ++N PV+ Sbjct: 1 MFCSLSKNTPIITQGITGKAGSFHTEQCLAY-GSNFVGGVTPGKGGTK----HLNRPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK+ T A++I+VPP+ A +AIIE+ +A I LIVCITEGIPV DM+ V ++ S Sbjct: 56 SVLEAKQATNCRATMIFVPPAYAAEAIIEAEDAGIELIVCITEGIPVKDMLEVSHVMQYS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPGI+ P CKIGIMPG I GSVG++SRSGTLTYEAV+Q +Q +GQS Sbjct: 116 SSRLIGPNCPGIIKPGVCKIGIMPGYIHLPGSVGVVSRSGTLTYEAVWQLTQRSIGQSLC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FIDVLE F D TE I+M+GEIGGSAEEEAA++++ KP++ Sbjct: 176 IGIGGDPLNGTSFIDVLEEFQNDPQTELILMIGEIGGSAEEEAAEWIQAYC----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG+TAP G+ MGHAGA+ISG G A+ K A++ AG+C+ SPA IG ++ LL SL Sbjct: 232 AFIAGETAPKGKRMGHAGAIISGNSGDAKSKKEALRRAGVCVVESPALIGETVETLLRSL 291 >gi|171921151|gb|ACB59227.1| succinyl-CoA synthetase alpha chain [Tetrathiobacter mimigardefordensis] Length = 293 Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 153/301 (50%), Positives = 216/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K++KV+ QG+TGK G FHT Y + V G++PK+ + G VP+ Sbjct: 1 MSILINKDSKVITQGITGKTGQFHTRMCRDYANGKEAFVAGVNPKRAGEDFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +AKE+T AN SVIYVPP+GA DAI E+++A++ L++CITEGIPV DM+ V+ R+ Sbjct: 57 YASVKDAKEQTGANVSVIYVPPAGAADAIWEAVDADLDLVICITEGIPVRDMLAVRNRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + + L+GPNCPG++TPD KIGIMP I +KG +G++SRSGTLTYEAV Q ++ GLG Sbjct: 117 QENKKTLLLGPNCPGLITPDELKIGIMPAHICKKGRIGVVSRSGTLTYEAVAQLTELGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + ID+L++F D T+++VM+GEIGG E AA++ KD Sbjct: 177 QSSAVGIGGDPINGLKHIDILKMFNDDPETDAVVMIGEIGGPDEVNAAEWAKDNM----S 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI +P+ +G+ L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLEIMEACGIRTTRNPSEMGKLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|170085075|ref|XP_001873761.1| succinyl-CoA-ligase [Laccaria bicolor S238N-H82] gi|164651313|gb|EDR15553.1| succinyl-CoA-ligase [Laccaria bicolor S238N-H82] Length = 330 Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 168/301 (55%), Positives = 221/301 (73%), Gaps = 10/301 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++++ K+TKVL QGLTGK TFH +A+ Y T +VGG+ PKK G +PVF + Sbjct: 32 NLMIHKDTKVLCQGLTGKTATFHITEALAY-GTNMVGGVSPKKAGQTHLG----LPVFGS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA T +A+++YVPP A DAIIE+IE EI LIVC+TEGIP D +RV L+ +S Sbjct: 87 VREAVRETKPDATILYVPPPTAADAIIEAIENEIGLIVCVTEGIPQADEIRVMNALKSQS 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPG++ P CK+GI PG I G++GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 147 RSRLVGPNCPGVINPLGCKMGIQPGHIHTPGNIGIVSRSGTLTYEAVAQTTDVGLGQSLC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK-RGRKKPI 239 VGIGGDP GT+ +DV+++FL D T+ IV++GEIGGS EEEAA++L+ K R KP+ Sbjct: 207 VGIGGDPFPGTQHVDVIKVFLEDPNTKGIVIIGEIGGSMEEEAAEYLERHNKTRSHPKPV 266 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VGF+AG+TAPPGR MGHAGA+ISGGKG A DK+ A+++AG+ + SPA+IG VE+L + Sbjct: 267 VGFIAGRTAPPGRRMGHAGAIISGGKGAASDKVKALEKAGVIVTDSPAKIG---VEILKA 323 Query: 300 L 300 + Sbjct: 324 M 324 >gi|226372794|gb|ACO52022.1| Succinyl-CoA ligase subunit alpha, mitochondrial precursor [Rana catesbeiana] Length = 325 Score = 308 bits (789), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 177/293 (60%), Positives = 223/293 (76%), Gaps = 6/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 + +DK+TKV+ QG TGK GTFH++QA+ Y T++VGG+ P KG G +PVF + Sbjct: 28 HLYIDKDTKVICQGFTGKQGTFHSQQALEY-GTKLVGGVSPGKGGKTHLG----LPVFNS 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK T A ASVIYVPP A AI ESI+AE+PL+VCITEGIP DMVRVK RL ++ Sbjct: 83 VAEAKAGTGATASVIYVPPPFAAAAIHESIDAEMPLVVCITEGIPQQDMVRVKHRLLRQT 142 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 143 TTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 202 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID E+FL D TE I+++GEIGGSAEE AA +LK+ KP+V Sbjct: 203 VGIGGDPFNGTNFIDCPEVFLNDPKTEGIILIGEIGGSAEENAANYLKEHNCGSNAKPVV 262 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ Sbjct: 263 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQRAGVVVSMSPAQLGSTM 315 >gi|300692430|ref|YP_003753425.1| succinate-CoA ligase (GDP-forming), alpha subunit, NAD(P)-binding [Ralstonia solanacearum PSI07] gi|299079490|emb|CBJ52166.1| Succinate-CoA ligase (GDP-forming), alpha subunit, NAD(P)-binding [Ralstonia solanacearum PSI07] Length = 293 Score = 308 bits (789), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 160/301 (53%), Positives = 216/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK +T A SVIYVPP+GA AI E+++A++ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YASVKEAKAQTGATVSVIYVPPAGAAAAIWEAVDADLDLVVCITEGIPVRDMMEVKDKMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K + + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KQNKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAYWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+E GI +P+ +GR L L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEECGIKATKNPSEMGRLLKAL 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|110598887|ref|ZP_01387138.1| succinyl-CoA synthetase, alpha subunit [Chlorobium ferrooxidans DSM 13031] gi|110339500|gb|EAT58024.1| succinyl-CoA synthetase, alpha subunit [Chlorobium ferrooxidans DSM 13031] Length = 299 Score = 308 bits (789), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 174/303 (57%), Positives = 228/303 (75%), Gaps = 10/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T++LVQG+TG GTFHT Q IL T VV G+ P KG + G + Sbjct: 1 MSVLVNKDTRLLVQGITGGEGTFHTSQ-ILEYGTNVVAGVTPGKGGVLYHGNEKDKFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV +A E+ ANA+VI+VP + A DAI+E+ A + +I+CITEGIPV DM++ A Sbjct: 60 VPVFNTVRDAVEKAEANATVIFVPAAFAADAIMEAAAAGLKVIICITEGIPVNDMMKAYA 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 ++K + L+GPNCPG++TP KIGIMPG I +KG++G++SRSGTLTYEAV Q SQ GL Sbjct: 120 FVQKKGALLVGPNCPGVITPGEAKIGIMPGFIHKKGTIGVVSRSGTLTYEAVHQLSQVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT FID ++LF DE TE +VM+GEIGGSAEEEAA+++ + Sbjct: 180 GQSTCIGIGGDPIIGTRFIDAIKLFANDEETEGLVMIGEIGGSAEEEAAEYI----SKHF 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG AEDKI AM+ AGI + SPA +G ++++ Sbjct: 236 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAEDKIKAMEAAGIHVVDSPADLGEAMLK 295 Query: 296 LLG 298 LG Sbjct: 296 ALG 298 >gi|161523834|ref|YP_001578846.1| succinyl-CoA synthetase subunit alpha [Burkholderia multivorans ATCC 17616] gi|189351404|ref|YP_001947032.1| succinyl-CoA synthetase subunit alpha [Burkholderia multivorans ATCC 17616] gi|221200156|ref|ZP_03573199.1| succinyl-CoA synthetase, alpha subunit [Burkholderia multivorans CGD2M] gi|221206691|ref|ZP_03579703.1| succinyl-CoA synthetase, alpha subunit [Burkholderia multivorans CGD2] gi|221211338|ref|ZP_03584317.1| succinyl-CoA synthetase, alpha subunit [Burkholderia multivorans CGD1] gi|254251509|ref|ZP_04944827.1| Succinyl-CoA synthetase [Burkholderia dolosa AUO158] gi|124894118|gb|EAY67998.1| Succinyl-CoA synthetase [Burkholderia dolosa AUO158] gi|160341263|gb|ABX14349.1| succinyl-CoA synthetase, alpha subunit [Burkholderia multivorans ATCC 17616] gi|189335426|dbj|BAG44496.1| succinyl-CoA synthetase alpha chain [Burkholderia multivorans ATCC 17616] gi|221168699|gb|EEE01167.1| succinyl-CoA synthetase, alpha subunit [Burkholderia multivorans CGD1] gi|221173346|gb|EEE05781.1| succinyl-CoA synthetase, alpha subunit [Burkholderia multivorans CGD2] gi|221180395|gb|EEE12799.1| succinyl-CoA synthetase, alpha subunit [Burkholderia multivorans CGD2M] Length = 293 Score = 308 bits (789), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 160/297 (53%), Positives = 211/297 (71%), Gaps = 12/297 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAKE T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKEETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGIKVTRNPSEMGRLL 289 >gi|66805061|ref|XP_636263.1| succinate-CoA ligase [Dictyostelium discoideum AX4] gi|166202795|sp|P36967|SUCA_DICDI RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; AltName: Full=p36; Flags: Precursor gi|60464615|gb|EAL62749.1| succinate-CoA ligase [Dictyostelium discoideum AX4] Length = 315 Score = 308 bits (789), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 174/297 (58%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 S+L++K+TKV+ QG TG GTFH++QAI Y T +VGG+ P KG ++++PVF T Sbjct: 21 SVLINKHTKVICQGFTGNQGTFHSKQAIEY-GTNMVGGVSPGKGGQK----HLDLPVFNT 75 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EAKE T ANA+VIYVPP A AI E+I+AE+ L+VCITEGIP DMV+VK L K + Sbjct: 76 VKEAKEATGANATVIYVPPPHAAAAIKEAIDAEMELVVCITEGIPQQDMVKVKYLLNKQN 135 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 136 KTRLIGPNCPGIIKPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVAQTTAVGLGQSTC 195 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++F D TE I+++GEIGG AEEEAAQ+L D KP+V Sbjct: 196 IGIGGDPFNGTNFIDCLKMFTQDPQTEGIILIGEIGGEAEEEAAQWLIDNP---TDKPVV 252 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APPGR MGHAGA+ISGGKG A KI A+K AG+ + SPA++G ++++ + Sbjct: 253 SFIAGLSAPPGRRMGHAGAIISGGKGDANSKIEALKAAGVTVTFSPAKLGETILQKM 309 >gi|253698898|ref|YP_003020087.1| succinyl-CoA synthetase, subunit alpha [Geobacter sp. M21] gi|251773748|gb|ACT16329.1| succinyl-CoA synthetase, alpha subunit [Geobacter sp. M21] Length = 298 Score = 308 bits (789), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 162/293 (55%), Positives = 216/293 (73%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K ++++VQG+TG++G FHT+Q Y + VV G+ P KG + G +PVF Sbjct: 1 MSILINKASRIVVQGITGRSGLFHTQQCREY-GSNVVAGVTPGKGGIHIEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + T+AN S+I+VPP GA DAI+E+ A + L VCITEGIPV DMV VKA L++S Sbjct: 56 TVAEAVKYTSANVSMIFVPPPGAADAILEAAAAGLELAVCITEGIPVRDMVPVKAVLQQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP CKIGIMPG I + G +G++SRSGTLTYEAV Q + GLGQS+ Sbjct: 116 KMRLVGPNCPGVITPGECKIGIMPGHIHKPGKIGVVSRSGTLTYEAVKQLTDMGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G F+DVL++F D TE + M+GEIGG+AEEEAA +++ KKP+ Sbjct: 176 VGIGGDPIIGMSFVDVLKMFNEDPGTEGVFMIGEIGGAAEEEAAVWIQKHM----KKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG TAPPG+ MGHAGA+I+GGKG A DKI + E G+ +A SP ++G ++ Sbjct: 232 AFIAGVTAPPGKRMGHAGAIITGGKGKAADKIRTLTECGVTVATSPTKMGEAM 284 >gi|28199798|ref|NP_780112.1| succinyl-CoA synthetase subunit alpha [Xylella fastidiosa Temecula1] gi|71898262|ref|ZP_00680436.1| Succinyl-CoA ligase, alpha subunit [Xylella fastidiosa Ann-1] gi|182682550|ref|YP_001830710.1| succinyl-CoA synthetase subunit alpha [Xylella fastidiosa M23] gi|28057919|gb|AAO29761.1| succinyl-CoA synthetase, alpha subunit [Xylella fastidiosa Temecula1] gi|71732001|gb|EAO34058.1| Succinyl-CoA ligase, alpha subunit [Xylella fastidiosa Ann-1] gi|182632660|gb|ACB93436.1| succinyl-CoA synthetase, alpha subunit [Xylella fastidiosa M23] gi|307578829|gb|ADN62798.1| succinyl-CoA synthetase subunit alpha [Xylella fastidiosa subsp. fastidiosa GB514] Length = 290 Score = 308 bits (789), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 214/298 (71%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG ++++PVF Sbjct: 1 MSVLVNKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGNT----HIDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A+ASVIYVPP A DAI+E+ A I +IV ITEGIPVLDM+RVK L+ S Sbjct: 56 TVREAVQNTGADASVIYVPPPFAADAILEAAAAGIKVIVAITEGIPVLDMLRVKNVLKAS 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PEITLIGPNCPGVITPGECKIGIMPGHIHKPGHIGIVSRSGTLTYEAVKQTTDVGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G F+D L+LF D T+ I+MVGEIGG AEE A+++K KKP+ Sbjct: 176 CIGIGGDPINGLNFVDALKLFNNDPQTKGIIMVGEIGGDAEEAGAEYIKHHV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG +AP G+ MGHAGA+ SGG G AE K AM++AGI SP +G ++ L+ Sbjct: 232 VGFIAGASAPKGKRMGHAGAIASGGSGTAEGKFAAMEKAGIKTVRSPGDLGAAIALLV 289 >gi|171692603|ref|XP_001911226.1| hypothetical protein [Podospora anserina S mat+] gi|170946250|emb|CAP73051.1| unnamed protein product [Podospora anserina S mat+] Length = 332 Score = 308 bits (788), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 166/293 (56%), Positives = 214/293 (73%), Gaps = 6/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKVL QG TGK GTFH +QAI Y T+VVGG +PKK G +PVF Sbjct: 35 NLRINSDTKVLFQGFTGKQGTFHAQQAIDYG-TKVVGGTNPKKAGQEHLG----LPVFAN 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V++A + T A A+ I+VPP A I E++ AEIPL+VCITEGIP DMVR+ + L+ ++ Sbjct: 90 VSDAVKETGATATAIFVPPPLAAAGIEEAVAAEIPLVVCITEGIPQHDMVRITSILKSQN 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 150 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+M+GEIGGSAEEEAA FLK KP+V Sbjct: 210 VGIGGDPFSGTNFIDCLKVFLEDGETDGIIMIGEIGGSAEEEAADFLKQYNTVNGGKPVV 269 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG +APPGR MGHAGA+++GGKG A KI A++ AG+ + SPA +G++L Sbjct: 270 SFIAGISAPPGRRMGHAGAIVAGGKGDANSKIKALEAAGVVVERSPASLGKAL 322 >gi|317402901|gb|EFV83443.1| succinyl-CoA ligase subunit alpha [Achromobacter xylosoxidans C54] Length = 293 Score = 308 bits (788), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 161/301 (53%), Positives = 214/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCREYANGKAAFVAGVNPKKAGEDFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V +AK T A SVIYVPP+GA AI E++EAE+ L++CITEGIPV DM+ VK R++ Sbjct: 57 FASVKDAKADTGATVSVIYVPPAGAAAAIWEAVEAELDLVICITEGIPVRDMLEVKNRMK 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S+ L+GPNCPG++TPD KIGIMPG I RKG +GI+SRSGTLTYEAV Q ++ GLG Sbjct: 117 AKGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGIVSRSGTLTYEAVAQVTELGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + +DVL++F D T++++M+GEIGG E AAQ+ KD K Sbjct: 177 QSSAVGIGGDPINGLKHVDVLKMFNDDPDTDAVIMIGEIGGPDEVNAAQWAKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI +P+ +G+ L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLEVMEACGIRTTRNPSEMGKLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|70998594|ref|XP_754019.1| succinyl-CoA synthetase alpha subunit [Aspergillus fumigatus Af293] gi|66851655|gb|EAL91981.1| succinyl-CoA synthetase alpha subunit, putative [Aspergillus fumigatus Af293] gi|159126247|gb|EDP51363.1| succinyl-CoA synthetase alpha subunit, putative [Aspergillus fumigatus A1163] Length = 331 Score = 308 bits (788), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 171/294 (58%), Positives = 220/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH EQAI Y T+VVGG +PKK T +++ PVF Sbjct: 36 NLRINADTKVIFQGFTGKQGTFHAEQAIAYG-TKVVGGTNPKKAGTM----HLDRPVFAN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V+EA + T A AS I+VPP A I E+I AE+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 91 VSEAVKETGATASAIFVPPPLAAAGIEEAIAAEVPLVVCITEGIPQHDMVRITDILKTQN 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+++GEIGGSAEE+AA+F K A KP V Sbjct: 211 VGIGGDPFSGTNFIDCLKIFLEDEETDGIILIGEIGGSAEEDAAEFFK--ANNKHNKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L+ Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALESAGVTVERSPAHLGKTLL 322 >gi|134296850|ref|YP_001120585.1| succinyl-CoA synthetase subunit alpha [Burkholderia vietnamiensis G4] gi|134140007|gb|ABO55750.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Burkholderia vietnamiensis G4] Length = 293 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 160/301 (53%), Positives = 212/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMQMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGITVTRNPSEMGRLLKKA 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|76808907|ref|YP_332389.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei 1710b] gi|121598420|ref|YP_993972.1| succinyl-CoA synthetase subunit alpha [Burkholderia mallei SAVP1] gi|124384244|ref|YP_001028361.1| succinyl-CoA synthetase subunit alpha [Burkholderia mallei NCTC 10229] gi|126451321|ref|YP_001079595.1| succinyl-CoA synthetase subunit alpha [Burkholderia mallei NCTC 10247] gi|134279750|ref|ZP_01766462.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 305] gi|217419486|ref|ZP_03450992.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 576] gi|226199403|ref|ZP_03794961.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei Pakistan 9] gi|237811013|ref|YP_002895464.1| succinate-CoA ligase, alpha subunit subfamily [Burkholderia pseudomallei MSHR346] gi|238563605|ref|ZP_00438605.2| succinate-CoA ligase, alpha subunit subfamily [Burkholderia mallei GB8 horse 4] gi|254177108|ref|ZP_04883765.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei ATCC 10399] gi|254181631|ref|ZP_04888228.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 1655] gi|254187589|ref|ZP_04894101.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei Pasteur 52237] gi|254196300|ref|ZP_04902724.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei S13] gi|254203785|ref|ZP_04910145.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei FMH] gi|254208762|ref|ZP_04915110.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei JHU] gi|254258780|ref|ZP_04949834.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 1710a] gi|254296290|ref|ZP_04963747.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 406e] gi|254360189|ref|ZP_04976459.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei 2002721280] gi|76578360|gb|ABA47835.1| succinyl-CoA synthase, alpha subunit [Burkholderia pseudomallei 1710b] gi|121227230|gb|ABM49748.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei SAVP1] gi|124292264|gb|ABN01533.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei NCTC 10229] gi|126244191|gb|ABO07284.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei NCTC 10247] gi|134248950|gb|EBA49032.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 305] gi|147745297|gb|EDK52377.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei FMH] gi|147750638|gb|EDK57707.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei JHU] gi|148029429|gb|EDK87334.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei 2002721280] gi|157805803|gb|EDO82973.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 406e] gi|157935269|gb|EDO90939.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei Pasteur 52237] gi|160698149|gb|EDP88119.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei ATCC 10399] gi|169653043|gb|EDS85736.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei S13] gi|184212169|gb|EDU09212.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 1655] gi|217396790|gb|EEC36806.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 576] gi|225928479|gb|EEH24508.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei Pakistan 9] gi|237505320|gb|ACQ97638.1| succinate-CoA ligase, alpha subunit subfamily [Burkholderia pseudomallei MSHR346] gi|238520368|gb|EEP83829.1| succinate-CoA ligase, alpha subunit subfamily [Burkholderia mallei GB8 horse 4] gi|254217469|gb|EET06853.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 1710a] Length = 309 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 159/297 (53%), Positives = 210/297 (70%), Gaps = 12/297 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 17 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGDNFEG----IPI 72 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 73 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 132 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 133 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 192 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 193 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 248 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L Sbjct: 249 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGITVTRNPSEMGRLL 305 >gi|310790373|gb|EFQ25906.1| succinate-CoA ligase [Glomerella graminicola M1.001] Length = 333 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 171/295 (57%), Positives = 217/295 (73%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ TKVL QG TGK GTFH +QAI Y T+VVGG +PKK G +PVF Sbjct: 36 NLRINSETKVLFQGFTGKQGTFHAQQAIDYG-TKVVGGTNPKKAGQEHLG----LPVFAN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + T A+A+ I+VPP A I E+I AE+PL+VCITEGIP DMVR+ L+ +S Sbjct: 91 VGEAVKETGADATAIFVPPPLAAAGIEEAIAAEVPLVVCITEGIPQHDMVRITNMLKTQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA FL+ KP+V Sbjct: 211 VGIGGDPFSGTNFIDCLNVFLKDEETDGIIMIGEIGGSAEEDAADFLRANNTVNGGKPVV 270 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG +APPGR MGHAGA++SGGKGGA+ KI+A+K AG+ + PSPA +G++L + Sbjct: 271 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALKSAGVIVEPSPAGLGKALYD 325 >gi|319760466|ref|YP_004124404.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Candidatus Blochmannia vafer str. BVAF] gi|318039180|gb|ADV33730.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Candidatus Blochmannia vafer str. BVAF] Length = 297 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 156/298 (52%), Positives = 213/298 (71%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+++NTKV+ QG TGK +FH++QA+ Y T++VGG+ P KG + G +PVF Sbjct: 1 MSILINRNTKVICQGFTGKKASFHSKQALSY-GTKIVGGVTPGKGGSIHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T A ASVIYVP DAI+E+I ++I LIVCITEGIP+LDM+ +K +L++ Sbjct: 56 TVYEAIQQTHATASVIYVPAPFCKDAILEAIYSKIHLIVCITEGIPILDMLIIKQQLQRQ 115 Query: 121 SSR-LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++ +IGPNCPG++TP CKIGIMP I G+VG++SRSGTLTYE V Q + GLGQST Sbjct: 116 NTCIMIGPNCPGVITPKQCKIGIMPDYIHNPGNVGVISRSGTLTYEVVKQITDSGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ G+ F D+L+LF D T+ I+M+GEIGG +EE+AA ++ K+ KPI Sbjct: 176 CVGIGGDPILGSNFTDILKLFEQDTQTKLIIMIGEIGGKSEEQAATYI----KKYMTKPI 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + ++AG TAP G+ MGHAGA+ISG +K A+ EAG+ IA + IG+ E+L Sbjct: 232 IAYIAGSTAPKGKRMGHAGAIISGKGTNVYEKYTALSEAGVYIAENFVNIGKMAKEIL 289 >gi|293604312|ref|ZP_06686719.1| succinyl-CoA synthetase subunit alpha [Achromobacter piechaudii ATCC 43553] gi|292817189|gb|EFF76263.1| succinyl-CoA synthetase subunit alpha [Achromobacter piechaudii ATCC 43553] Length = 293 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 161/301 (53%), Positives = 214/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCREYANGKAAFVAGVNPKKAGEDFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V EAK T A SVIYVPP+GA AI E++EAE+ L++CITEGIPV DM+ VK R++ Sbjct: 57 FASVKEAKADTGATVSVIYVPPAGAAAAIWEAVEAELDLVICITEGIPVRDMLEVKNRMK 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S+ L+GPNCPG++TPD KIGIMPG I RKG +GI+SRSGTLTYEAV Q ++ GLG Sbjct: 117 AKGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGIVSRSGTLTYEAVAQVTELGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + +DVL++F D T++++M+GEIGG E AA++ KD K Sbjct: 177 QSSAVGIGGDPINGLKHVDVLKMFNDDPDTDAVIMIGEIGGPDEVNAAEWAKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI +P+ +G+ L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLEVMEACGIRTTRNPSEMGKLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|61097981|ref|NP_001012910.1| succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Gallus gallus] gi|53130362|emb|CAG31510.1| hypothetical protein RCJMB04_7e3 [Gallus gallus] Length = 331 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 173/293 (59%), Positives = 226/293 (77%), Gaps = 6/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+ QG TGK GTFH++QA+ Y T +VGG+ P KG G +PVF + Sbjct: 34 NLYINKSTKVICQGFTGKQGTFHSQQALEY-GTNLVGGVSPGKGGKTHLG----LPVFNS 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A+A+VIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL ++ Sbjct: 89 VKEAKEQTGASATVIYVPPPFAAAAINEAIDAEMPLVVCITEGIPQQDMVRVKHRLLRQN 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 149 KTRLVGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSFC 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D TE I+++GEIGG+AEE+AA FLK+ KP+V Sbjct: 209 VGIGGDPFNGTNFIDCLDVFLKDPHTEGIILIGEIGGNAEEDAASFLKENNSGPNAKPVV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ Sbjct: 269 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTI 321 >gi|53724722|ref|YP_102102.1| succinyl-CoA synthetase subunit alpha [Burkholderia mallei ATCC 23344] gi|166998882|ref|ZP_02264734.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei PRL-20] gi|167718280|ref|ZP_02401516.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei DM98] gi|167737328|ref|ZP_02410102.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei 14] gi|167822917|ref|ZP_02454388.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei 9] gi|167844484|ref|ZP_02469992.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei B7210] gi|167909718|ref|ZP_02496809.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei 112] gi|52428145|gb|AAU48738.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei ATCC 23344] gi|243064962|gb|EES47148.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei PRL-20] Length = 293 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 159/297 (53%), Positives = 210/297 (70%), Gaps = 12/297 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGDNFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGITVTRNPSEMGRLL 289 >gi|322817830|gb|EFZ25427.1| succinyl-CoA synthetase alpha subunit, putative [Trypanosoma cruzi] Length = 303 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 164/295 (55%), Positives = 221/295 (74%), Gaps = 9/295 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 ++ NTKV+ QG+TGK GT+HT+QAI Y T++VGG++PKK + G +PVF TV Sbjct: 10 WINNNTKVICQGITGKHGTYHTQQAIEY-GTKMVGGVNPKKAGMNYLG----LPVFGTVT 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSS 122 EA + T A+A+VIYVP A+ E+++AEIPL+V ITEGIP DM+RVK+ L ++ + Sbjct: 65 EAVKATGADATVIYVPAPHCAAAVEEALDAEIPLVVVITEGIPQWDMLRVKSMLLSQNKT 124 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPNCPGI+ P+ CKIGIMPG I +KG +G++SRSGTLTYEAV QT+ + LGQS VG Sbjct: 125 RLIGPNCPGIIRPEECKIGIMPGHIHQKGCIGVVSRSGTLTYEAVAQTTAKNLGQSLCVG 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP GT ID ++ +L D ATE I+++GEIGG+AEEEAA+F+K+ KKP+V F Sbjct: 185 IGGDPFNGTNMIDCVKFYLEDPATEGIILIGEIGGTAEEEAAEFIKNHP---IKKPVVSF 241 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + G TAPPGR MGHAGAV+SGG+G A+ K+ A+K AG+ ++ SPA++G + E + Sbjct: 242 IGGMTAPPGRRMGHAGAVVSGGQGTAKGKMEALKAAGVIVSESPAQLGELMAEAI 296 >gi|325520206|gb|EGC99380.1| succinyl-CoA synthetase subunit alpha [Burkholderia sp. TJI49] Length = 293 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 160/301 (53%), Positives = 212/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAKE T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKEETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A K+ M+ GI + +P+ +GR L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAAAKLEIMEACGITVTRNPSEMGRLLKKA 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|167585556|ref|ZP_02377944.1| succinyl-CoA synthetase subunit alpha [Burkholderia ubonensis Bu] Length = 293 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 160/301 (53%), Positives = 212/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGITVTRNPSEMGRLLKKA 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|780694|gb|AAA85724.1| succinyl coenzyme A synthetase alpha subunit [Dictyostelium discoideum] Length = 310 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 174/295 (58%), Positives = 218/295 (73%), Gaps = 9/295 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 S+L++KNTKV+ QG TG GTFH++QAI Y T +VGG+ P KG ++++P F T Sbjct: 21 SVLINKNTKVICQGFTGNQGTFHSKQAIEY-GTNMVGGVSPGKGGQK----HLDLPAFNT 75 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EAKE T ANA+VIYVPP A AI E+I+AE+ L+VCITEGIP DMV+VK L K + Sbjct: 76 VKEAKEATGANATVIYVPPPHAAAAIKEAIDAEMELVVCITEGIPQQDMVKVKYLLNKQN 135 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 136 KTRLIGPNCPGIIKPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVAQTTAVGLGQSTC 195 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++F D TE I+++GEIGG AEEEAAQ+L D KP+V Sbjct: 196 IGIGGDPFNGTNFIDCLKMFTQDPQTEGIILIGEIGGEAEEEAAQWLIDNP---TDKPVV 252 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG +APPGR MGHAGA+ISGGKG A KI A+K AG+ + SPA++G +++ Sbjct: 253 SFIAGLSAPPGRRMGHAGAIISGGKGDANSKIEALKAAGVTVTFSPAKLGETILR 307 >gi|299755339|ref|XP_001828601.2| succinate-CoA ligase [Coprinopsis cinerea okayama7#130] gi|298411181|gb|EAU93204.2| succinate-CoA ligase [Coprinopsis cinerea okayama7#130] Length = 331 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 167/298 (56%), Positives = 218/298 (73%), Gaps = 7/298 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ K+TKVL QGLTGK GTFH +A+ Y T++VGG+ P K G +P+F + Sbjct: 33 NLLIHKDTKVLCQGLTGKTGTFHVREALAY-GTKMVGGVSPNKAGQTHLG----LPIFGS 87 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + T +A+V+YVPP A DAIIE+IE EI LIVCITEGIP D +RV L+ +S Sbjct: 88 VREAVKETQPDATVLYVPPPTAADAIIEAIENEISLIVCITEGIPQADEIRVMNALKSQS 147 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P CK+GI PG I + G +GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 148 KSRLVGPNCPGIINPLGCKMGIQPGHIHKPGKIGIVSRSGTLTYEAVAQTTDVGLGQSLC 207 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK-RGRKKPI 239 VGIGGDP GT+ +DV+++FL D TE IV++GEIGG+ EEEAA++L K KP+ Sbjct: 208 VGIGGDPFPGTQHVDVIKVFLEDPNTEGIVIIGEIGGTMEEEAAEYLAQYNKTSANPKPV 267 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGR MGHAGA+ISGGKG A DK+ A++ AG+ + SPA+IG +++ + Sbjct: 268 VGFIAGRTAPPGRRMGHAGAIISGGKGAAIDKVKALEAAGVIVTDSPAKIGSEMLKAM 325 >gi|332025029|gb|EGI65216.1| Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Acromyrmex echinatior] Length = 1767 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 171/278 (61%), Positives = 214/278 (76%), Gaps = 6/278 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +D NTKV+ QG TGK GTFH +QA+ Y T++VGG+ PKK G PV+ T Sbjct: 34 NLKIDANTKVMCQGFTGKQGTFHCQQALDYG-TKIVGGVSPKKAGIEHLGK----PVYKT 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE TAA A+VIYVPP A AI+E+I+AE+PLIVCITEGIP DMV+VK RL E++ Sbjct: 89 VKEAKEATAATATVIYVPPPAAASAIMEAIDAEMPLIVCITEGIPQHDMVKVKRRLLEQN 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 149 KSRLIGPNCPGIIAPEQCKIGIMPGHIHQKGKIGIVSRSGTLTYEAVNQTTLTGLGQTLC 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID L++FL D I+M+GEIGGSAEE AA++L ++ KP+V Sbjct: 209 VGIGGDPFNGTDFIDCLDVFLTDPDCCGIIMIGEIGGSAEEFAAEYLIEKNTGPTAKPVV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEA 278 F+AG TAPPGR MGHAGA+ISGGKGGA+DKI+A++++ Sbjct: 269 SFIAGLTAPPGRRMGHAGAIISGGKGGAQDKIDALEKS 306 >gi|187478793|ref|YP_786817.1| succinyl-CoA synthetase subunit alpha [Bordetella avium 197N] gi|115423379|emb|CAJ49913.1| succinyl-CoA synthetase alpha chain [Bordetella avium 197N] Length = 293 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 160/301 (53%), Positives = 215/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCRDYANGKAAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +AK+ T A SVIYVPP+GA AI E++EAE+ L+VCITEGIPV DM+ VK R+ Sbjct: 57 YASVKDAKDDTGATVSVIYVPPAGAAAAIWEAVEAELALVVCITEGIPVRDMLEVKNRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + S+ L+GPNCPG++TPD KIGIMPG I RKG +GI+SRSGTLTYEAV Q ++ GLG Sbjct: 117 EKGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGIVSRSGTLTYEAVAQVTELGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + +DVL+LF D T++++M+GEIGG E AA++ KD K Sbjct: 177 QSSAVGIGGDPINGLKHVDVLKLFNDDPETDAVIMIGEIGGPDEVAAAEWAKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI +P+ +G+ L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLEVMEACGIKTTRNPSEMGKLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|126438953|ref|YP_001057865.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei 668] gi|126452387|ref|YP_001065099.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei 1106a] gi|242317946|ref|ZP_04816962.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 1106b] gi|126218446|gb|ABN81952.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 668] gi|126226029|gb|ABN89569.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 1106a] gi|242141185|gb|EES27587.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 1106b] Length = 309 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 159/297 (53%), Positives = 210/297 (70%), Gaps = 12/297 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 17 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 72 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 73 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 132 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 133 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 192 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 193 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 248 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L Sbjct: 249 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGITVTRNPSEMGRLL 305 >gi|53718419|ref|YP_107405.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei K96243] gi|167814452|ref|ZP_02446132.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei 91] gi|167893010|ref|ZP_02480412.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei 7894] gi|167901474|ref|ZP_02488679.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei NCTC 13177] gi|167917741|ref|ZP_02504832.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei BCC215] gi|52208833|emb|CAH34772.1| succinyl-CoA ligase alpha-chain [Burkholderia pseudomallei K96243] Length = 293 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 159/297 (53%), Positives = 210/297 (70%), Gaps = 12/297 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGITVTRNPSEMGRLL 289 >gi|225707744|gb|ACO09718.1| Succinyl-CoA ligase subunit alpha, mitochondrial precursor [Osmerus mordax] Length = 324 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 171/295 (57%), Positives = 225/295 (76%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 + +DKNTKV+ QG TGK GTFH++Q++ Y +++VGG+ P KG G +PVF + Sbjct: 27 HLYIDKNTKVICQGFTGKQGTFHSQQSLDY-GSKLVGGVSPGKGGKTHLG----LPVFNS 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA+E T A+A+VIYVPP A AIIE+++AE+PL+VCITEGIP DMVRVK +L + Sbjct: 82 VKEAREGTGAHATVIYVPPPFAAAAIIEAVDAEMPLVVCITEGIPQQDMVRVKHKLLRQG 141 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 142 ITRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D TE I+++GEIGG+AEE AA++LK KP+V Sbjct: 202 IGIGGDPFNGTNFIDCLEVFLMDPKTEGIILIGEIGGNAEENAAEYLKQHNSGANAKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 262 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTMFK 316 >gi|73980931|ref|XP_532985.2| PREDICTED: similar to succinate-CoA ligase, GDP-forming, alpha subunit [Canis familiaris] Length = 333 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 182/294 (61%), Positives = 226/294 (76%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QG TGK GTFH++QA+ Y TQ+VGG P KG G +PVF TV Sbjct: 37 LYVDKNTKVICQGFTGKQGTFHSQQALDY-GTQLVGGTTPGKGGKTHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE T A ASVIYVPP A AI E++EAE+PL+VCITEGIP DMVRVK +L + Sbjct: 92 KEAKEETGATASVIYVPPPFAAAAINEAVEAEVPLVVCITEGIPQQDMVRVKHKLLRQGK 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 152 TRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 212 GIGGDPFNGTDFIDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKAKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 272 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 325 >gi|212535700|ref|XP_002148006.1| succinyl-CoA synthetase alpha subunit, putative [Penicillium marneffei ATCC 18224] gi|210070405|gb|EEA24495.1| succinyl-CoA synthetase alpha subunit, putative [Penicillium marneffei ATCC 18224] Length = 330 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 172/293 (58%), Positives = 222/293 (75%), Gaps = 8/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ T+V+ QG TGK GTFH EQAI Y T+VVGG +PKK T ++++PVF T Sbjct: 35 NLRINSETRVIFQGFTGKQGTFHAEQAIAYG-TKVVGGTNPKKAGTT----HLDLPVFAT 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V++A + T A AS I+VPP A I E+I AEIPL+VCITEGIP DMVR+ L+ + Sbjct: 90 VSDAVKETGATASAIFVPPPLAAAGIEEAIAAEIPLVVCITEGIPQHDMVRITDILKTQD 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 150 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLK E K + KP V Sbjct: 210 VGIGGDPFSGTNFIDCLKVFLEDEETDGIIMIGEIGGSAEEDAAEFLKSENK--KNKPTV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L Sbjct: 268 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALEAAGVIVERSPASLGKTL 320 >gi|300309993|ref|YP_003774085.1| succinyl-CoA synthetase subunit alpha [Herbaspirillum seropedicae SmR1] gi|124483476|emb|CAM32611.1| Succinyl-CoA synthetase alpha chain protein [Herbaspirillum seropedicae] gi|300072778|gb|ADJ62177.1| succinyl-CoA synthetase alpha chain protein [Herbaspirillum seropedicae SmR1] Length = 293 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 160/301 (53%), Positives = 214/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCRDYANGKNAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + V EAK T A SVIYVPP+GA AI E++EAE+ L +CITEGIPV DM+ +K R+ Sbjct: 57 YANVTEAKNATGATVSVIYVPPAGAAAAIWEAVEAELDLAICITEGIPVRDMLALKDRMA 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K+ S+ L+GPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KAGSKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E AA+++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEANAARWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+E GI + +P+ +GR L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLAIMEECGIKVTRNPSEMGRLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|189425774|ref|YP_001952951.1| succinyl-CoA synthetase, subunit alpha [Geobacter lovleyi SZ] gi|189422033|gb|ACD96431.1| succinyl-CoA synthetase, alpha subunit [Geobacter lovleyi SZ] Length = 290 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 167/297 (56%), Positives = 219/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K++K+LVQG+TGK+G FHT+Q Y +Q+V G+ P KG + G +PVF Sbjct: 1 MSILINKDSKILVQGITGKSGLFHTQQCRAY-GSQIVAGVTPGKGGIHIEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + T A S+I+VPP GA DAI+ES EA + L VCITEGIPV DMV +A +S Sbjct: 56 TVAEAVQYTGATISMIFVPPPGAADAILESCEAGLELAVCITEGIPVRDMVIARAVQAQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPGI+TP CK+GIMPG I G +G++SRSGTLTYEAV Q + GLGQST Sbjct: 116 KTLLVGPNCPGIITPGQCKLGIMPGYIHTPGKIGVVSRSGTLTYEAVKQLTDIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G ++IDVL++F D TE++ M+GEIGG AEEEAA ++K+ KKP+ Sbjct: 176 VGIGGDPIIGMKYIDVLKMFNEDPGTEAVFMIGEIGGGAEEEAAYWIKEN----MKKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPG+ MGHAGA+I+GGKG AEDKI ++E G+ ++ SP R+G ++ E L Sbjct: 232 AFIAGSTAPPGKRMGHAGAIITGGKGKAEDKIRTLQECGVTVSTSPPRMGEAMAEAL 288 >gi|300947192|ref|ZP_07161402.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 116-1] gi|300453178|gb|EFK16798.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 116-1] Length = 289 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 164/297 (55%), Positives = 208/297 (70%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y + + +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTK-----MVGGVTPGKGGPPPLGLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 288 >gi|5822495|pdb|2SCU|A Chain A, A Detailed Description Of The Structure Of Succinyl-Coa Synthetase From Escherichia Coli gi|5822497|pdb|2SCU|D Chain D, A Detailed Description Of The Structure Of Succinyl-Coa Synthetase From Escherichia Coli gi|157880064|pdb|1SCU|A Chain A, The Crystal Structure Of Succinyl-Coa Synthetase From Escherichia Coli At 2.5 Angstroms Resolution gi|227343895|pdb|1SCU|D Chain D, The Crystal Structure Of Succinyl-Coa Synthetase From Escherichia Coli At 2.5 Angstroms Resolution Length = 288 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 171/296 (57%), Positives = 216/296 (72%), Gaps = 9/296 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 SIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF T Sbjct: 1 SILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFNT 55 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 VREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST V Sbjct: 116 VRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+VG Sbjct: 176 GIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MG AGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 YIAGVTAPKGKRMGXAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 287 >gi|254457951|ref|ZP_05071378.1| succinyl-CoA ligase, alpha subunit [Campylobacterales bacterium GD 1] gi|207085344|gb|EDZ62629.1| succinyl-CoA ligase, alpha subunit [Campylobacterales bacterium GD 1] Length = 290 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 158/297 (53%), Positives = 209/297 (70%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+VQG TGK GTFH EQ + Y T++VGG+ P KG G PVF Sbjct: 1 MSILVNKDTKVIVQGFTGKEGTFHAEQCLAY-GTKIVGGVTPNKGGQEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A S+I+VPP+ GDA++E+ EA I L V ITEG PV DM KA K Sbjct: 56 TVKDAVSSTGATVSMIFVPPAFVGDAVMEAAEAGITLAVIITEGAPVKDMQAAKAHATKH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 IGPNCPGI+T + CKIGIMPGSIF+KG+VG++S+SGTLTYE Q EG G +TA Sbjct: 116 GMMTIGPNCPGIITAEECKIGIMPGSIFKKGNVGLISKSGTLTYEGANQVCNEGFGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G ++ +L +F AD T +IVM+GEIGG E +AA+ +K++ KP+V Sbjct: 176 VGIGGDPIIGLSYLQILPMFEADPDTHAIVMIGEIGGDLEIQAAKLIKEQI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAP G+TMGHAGA++SG G A++K+ A++ AG+ + SPA IG+++ E+L Sbjct: 232 AFIAGQTAPKGKTMGHAGAIVSGSAGTAKEKMEALEAAGVRVVVSPAEIGKAIAEVL 288 >gi|71667777|ref|XP_820834.1| succinyl-CoA synthetase alpha subunit [Trypanosoma cruzi strain CL Brener] gi|70886195|gb|EAN98983.1| succinyl-CoA synthetase alpha subunit, putative [Trypanosoma cruzi] Length = 303 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 163/295 (55%), Positives = 221/295 (74%), Gaps = 9/295 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 ++ NTKV+ QG+TGK GT+HT+QAI Y T+++GG++PKK + G +PVF TV Sbjct: 10 WINNNTKVICQGITGKHGTYHTQQAIEY-GTKMIGGVNPKKAGMNYLG----LPVFGTVT 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSS 122 EA + T A+A+VIYVP A+ E+++AEIPL+V ITEGIP DM+RVK+ L ++ + Sbjct: 65 EAVKATGADATVIYVPAPHCAAAVEEALDAEIPLVVVITEGIPQWDMLRVKSMLLSQNKT 124 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPNCPGI+ P+ CKIGIMPG I +KG +G++SRSGTLTYEAV QT+ + LGQS VG Sbjct: 125 RLIGPNCPGIIRPEECKIGIMPGHIHQKGCIGVVSRSGTLTYEAVAQTTAKSLGQSLCVG 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP GT ID ++ +L D ATE I+++GEIGG+AEEEAA+F+K+ KKP+V F Sbjct: 185 IGGDPFNGTNMIDCVKFYLEDPATEGIILIGEIGGTAEEEAAEFIKNHP---IKKPVVSF 241 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + G TAPPGR MGHAGAV+SGG+G A+ K+ A+K AG+ ++ SPA++G + E + Sbjct: 242 IGGMTAPPGRRMGHAGAVVSGGQGTAKGKMEALKAAGVIVSESPAQLGELMAEAI 296 >gi|298385587|ref|ZP_06995145.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Bacteroides sp. 1_1_14] gi|298261728|gb|EFI04594.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Bacteroides sp. 1_1_14] Length = 286 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 150/293 (51%), Positives = 213/293 (72%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+++VQG+TG+ G FH ++ Y T VVGG P KG T G +PVF Sbjct: 1 MSILIDKSTRLIVQGITGRDGLFHAKKMNEYG-TNVVGGTSPGKGGTEVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA E+T AN S+I+VP A DAI+E+ +A I LIVCI EGIP LD+++ E+ Sbjct: 56 TMYEAVEQTQANTSIIFVPARFAADAIMEAADAGIRLIVCIAEGIPTLDVIKAYRFAEQR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPG+++P +GI+PG +F+KG+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAMLVGPNCPGLISPGESMVGILPGQVFQKGNVGVISRSGTLTYEIVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+ +LE+F D T++IV++GEIGG+AEE+AA++++ KP+V Sbjct: 176 IGIGGDPVVGLHFLKLLEMFQNDPETKAIVLIGEIGGNAEEQAAEYIRSHV----NKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG++APPG+ MGHAGA++SGG G A+DKI A++ AGI +A P+ I + L Sbjct: 232 AFIAGQSAPPGKQMGHAGAIVSGGSGSAKDKIEALEAAGIRVAQEPSDIPKLL 284 >gi|311105072|ref|YP_003977925.1| succinyl-CoA ligase [Achromobacter xylosoxidans A8] gi|310759761|gb|ADP15210.1| succinyl-CoA ligase [Achromobacter xylosoxidans A8] Length = 293 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 160/301 (53%), Positives = 214/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCREYANGKAAFVAGVNPKKAGEDFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V +AK T A SVIYVPP+GA AI E++EAE+ L++CITEGIPV DM+ VK R++ Sbjct: 57 FASVKDAKADTGATVSVIYVPPAGAAAAIWEAVEAELDLVICITEGIPVRDMLEVKNRMK 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S+ L+GPNCPG++TPD KIGIMPG I RKG +GI+SRSGTLTYEAV Q ++ GLG Sbjct: 117 AKGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGIVSRSGTLTYEAVAQVTELGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + +DVL++F D T++++M+GEIGG E AA++ KD K Sbjct: 177 QSSAVGIGGDPINGLKHVDVLKMFNDDPDTDAVIMIGEIGGPDEVNAAEWAKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI +P+ +G+ L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLEVMEACGIRTTRNPSEMGKLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|329906525|ref|ZP_08274407.1| Succinyl-CoA ligase (ADP-forming) alpha chain [Oxalobacteraceae bacterium IMCC9480] gi|327547281|gb|EGF32127.1| Succinyl-CoA ligase (ADP-forming) alpha chain [Oxalobacteraceae bacterium IMCC9480] Length = 293 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 158/301 (52%), Positives = 212/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVVTQGITGKTGQFHTRMCREYANGANCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F VAEAK +T N SVIYVPP+GA AI E++EAE+ L +CITEGIPV DM+ +K R+ Sbjct: 57 FANVAEAKAKTGVNVSVIYVPPAGAAAAIWEAVEAELDLAICITEGIPVRDMMALKDRMA 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 KS S+ L+GPNCPG++TPD KIGIMPG I + G +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KSGSKTLLLGPNCPGLITPDEIKIGIMPGHIHKAGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + ID++ +F D T++++M+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDIMRMFNDDPDTDAVIMIGEIGGPDEANAAYWIKDN----MK 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+ GI + +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEACGITVTKNPSEMARLLKSM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|56476115|ref|YP_157704.1| succinyl-CoA synthetase subunit alpha [Aromatoleum aromaticum EbN1] gi|56312158|emb|CAI06803.1| Succinyl-CoA synthetase, alpha chain [Aromatoleum aromaticum EbN1] Length = 297 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 156/305 (51%), Positives = 216/305 (70%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHTE+ I Y + V G++PKK ++VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTEKCIEYANGKNCFVAGVNPKKAGEKI----LDVPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +AK+ T A SVIYVPP+GA DAI E+ EA++ L +CITEGIPV DM+ V+ +++ Sbjct: 57 YGSVKDAKQATGATVSVIYVPPAGAADAIWEACEADLDLAICITEGIPVRDMLIVRNKMK 116 Query: 119 KSSSR------LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + ++ L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ Sbjct: 117 QKVAKGGKETLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV+ +F D T++++M+GEIGG E EAAQ+ K Sbjct: 177 IGLGQSSAVGIGGDPINGLKHIDVMRMFNDDPDTDAVIMIGEIGGPDEAEAAQW----CK 232 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G + +P+ + + Sbjct: 233 ANMKKPIVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFTVTRNPSEMAKL 292 Query: 293 LVELL 297 L +L Sbjct: 293 LKAML 297 >gi|300710739|ref|YP_003736553.1| succinyl-CoA synthetase, alpha subunit [Halalkalicoccus jeotgali B3] gi|299124422|gb|ADJ14761.1| succinyl-CoA synthetase, alpha subunit [Halalkalicoccus jeotgali B3] Length = 289 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 154/298 (51%), Positives = 211/298 (70%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD++T+V+VQG+TG G FHTEQ + Y T VV G P +G G VPV+ Sbjct: 1 MSILVDEDTRVVVQGITGGEGKFHTEQMMEYG-TNVVAGAVPGRGGQEVAG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A A+ASVI+VPP+ A DAI ES+++E+ L V ITEGIP DM +V RL + Sbjct: 56 TVSQAVREEDADASVIFVPPAFAADAIFESLDSELDLAVAITEGIPTQDMSKVYKRLSEV 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPG++TPD K+GI+PG+IF G+VG++SRSGTLTY+ V + GLGQ+TA Sbjct: 116 DTHLVGPNCPGLITPDEAKLGILPGNIFSSGNVGLVSRSGTLTYQVVDNLTNRGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F+D L LF D T+++VM GEIGG EE+AA+F+ + P+ Sbjct: 176 VGIGGDPIIGTSFVDALSLFEEDPETDAVVMCGEIGGEDEEQAAEFIAEN----MDTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G AE KI+A+ +AG+ + +P + ++ +LL Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAESKIDALNDAGVPVGDTPEEVADNVEDLL 289 >gi|154338904|ref|XP_001565674.1| succinyl-CoA synthetase alpha subunit [Leishmania braziliensis MHOM/BR/75/M2904] gi|154338906|ref|XP_001565675.1| succinyl-CoA synthetase alpha subunit [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062726|emb|CAM39169.1| putative succinyl-CoA synthetase alpha subunit [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062727|emb|CAM39170.1| putative succinyl-CoA synthetase alpha subunit [Leishmania braziliensis MHOM/BR/75/M2904] Length = 300 Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 168/296 (56%), Positives = 216/296 (72%), Gaps = 9/296 (3%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 ++K+TK++VQG+TGKAG+FHT+ A+ Y T+VVGG+ PKK T G VPVF T AE Sbjct: 11 INKDTKLIVQGMTGKAGSFHTKAAMAY-GTKVVGGVSPKKAGTTALG----VPVFATTAE 65 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSR 123 A + T A ASV+YVP +I E++EAE+PL+V ITEGIP DM+RVK+ L ++ +R Sbjct: 66 AVKATGATASVLYVPAPLCAASIEEALEAEVPLVVVITEGIPQWDMLRVKSMLLSQNKTR 125 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 LIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQS VGI Sbjct: 126 LIGPNCPGIIKPGECKIGIMPGHIHQKGKIGIVSRSGTLTYEAVAQTTAVGLGQSLCVGI 185 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDP GT +D L LFL D TE I+++GEIGG+AEEEAA F+K+ KKP V F+ Sbjct: 186 GGDPFNGTNMVDCLRLFLNDPETEGIILIGEIGGTAEEEAADFIKNSP---IKKPTVSFI 242 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G TAPPGR MGHAGA++SGG G A+ K A++ AG+ ++ SPA +G+ + EL + Sbjct: 243 GGATAPPGRRMGHAGAIVSGGMGTAKGKKEALRAAGVTVSDSPAHLGKHMAELFAT 298 >gi|156778115|gb|ABU95432.1| Scs alpha [Sawyeria marylandensis] Length = 307 Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 166/294 (56%), Positives = 219/294 (74%), Gaps = 9/294 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 +L++K+TKV+ QG+TG G+FH++Q I Y T++VGG++PKK G +P+F V Sbjct: 21 VLINKDTKVICQGITGNQGSFHSQQMINY-GTKMVGGVNPKKVGEKHLG----LPIFKDV 75 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSS 121 +A + T +AS+++VPP AI+E IEAEIPLIVCITEGIP DMV+V + L+ + Sbjct: 76 RQAVKETGCHASMVFVPPPAGAAAIMEGIEAEIPLIVCITEGIPQHDMVKVVSALKTQKK 135 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RL+GPNCPG++ P+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQST V Sbjct: 136 TRLVGPNCPGVIKPNECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVSQTTAAGLGQSTVV 195 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FIDVL++FL D TE I+M+GEIGG AEE AA FL KKP+VG Sbjct: 196 GIGGDPFNGTNFIDVLDMFLHDPETEGIIMIGEIGGQAEEMAAHFLDISP---IKKPVVG 252 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGAVISGG G A+ + AM++ GI ++ +PA++G ++V+ Sbjct: 253 FIAGVTAPPGRRMGHAGAVISGGNGDAKSIMAAMEKVGIRMSATPAKMGTTMVQ 306 >gi|187925264|ref|YP_001896906.1| succinyl-CoA synthetase subunit alpha [Burkholderia phytofirmans PsJN] gi|187716458|gb|ACD17682.1| succinyl-CoA synthetase, alpha subunit [Burkholderia phytofirmans PsJN] Length = 293 Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 158/301 (52%), Positives = 213/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAYVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +VAEAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ +KAR+ Sbjct: 57 YASVAEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIELKARMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 +S+ L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 AKNSKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTAIGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T++++M+GEIGG E AA+++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVIMIGEIGGPDEANAAEWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGIKVTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|89898037|ref|YP_515147.1| succinyl-CoA synthetase subunit alpha [Chlamydophila felis Fe/C-56] gi|89331409|dbj|BAE81002.1| succinyl-CoA synthetase alpha chain [Chlamydophila felis Fe/C-56] Length = 291 Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 157/300 (52%), Positives = 213/300 (71%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M + K ++ QG+TGKAG+FHTE+ + Y + V G+ P KG T ++N+PV+ Sbjct: 1 MFCSLSKKIPIITQGITGKAGSFHTEKCLEY-GSNFVAGVTPGKGGTK----HLNLPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK+ T ++I+VPP+ A +AI+E+ +A I LIVCITEGIP+ DM+ V ++ S Sbjct: 56 SVLEAKQATNCQITMIFVPPAYAAEAILEAEDAGIELIVCITEGIPIKDMLEVSHVMQHS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPGI+ P +CKIGIMPG I G+VG++SRSGTLTYEAV+Q +Q +GQS Sbjct: 116 ASRLIGPNCPGIIKPGACKIGIMPGYIHLPGNVGVVSRSGTLTYEAVWQLTQRSIGQSVC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FIDVLE F D TE I+M+GEIGGSAEEEAA++++ KP+V Sbjct: 176 LGIGGDPLNGTSFIDVLEEFQNDPQTELILMIGEIGGSAEEEAAEWIQSYC----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG+TAP G+ MGHAGA+ISG G A+ K A+K AG+ + SPA IG ++ + SL Sbjct: 232 AFIAGETAPKGKRMGHAGAIISGNSGDAKSKKKALKRAGVSVVESPALIGEAVETVFRSL 291 >gi|195569663|ref|XP_002102828.1| GD20111 [Drosophila simulans] gi|194198755|gb|EDX12331.1| GD20111 [Drosophila simulans] Length = 421 Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 153/272 (56%), Positives = 205/272 (75%), Gaps = 6/272 (2%) Query: 25 TEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAG 84 ++++I Y T +VGG++PKKG T G PVF +VAEA E+ +A+VI++PP A Sbjct: 134 SKESIKY-GTNIVGGVNPKKGGTEHLGK----PVFKSVAEAVEKAKPDATVIFIPPPSAA 188 Query: 85 DAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTPDSCKIGIM 143 + I +IE+EI LIV ITEGIP DMVR+ L + SRL+GPNCPGI++PD CKIGIM Sbjct: 189 EGICAAIESEIGLIVAITEGIPQSDMVRISQMLNCQEKSRLLGPNCPGIISPDQCKIGIM 248 Query: 144 PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLAD 203 PG I ++G VGI+SRSGTLTYE+V QT+ GLGQ+ VG+GGDP GT FID L++FL+D Sbjct: 249 PGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALCVGLGGDPFNGTSFIDALKVFLSD 308 Query: 204 EATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISG 263 + + IVM+GEIGGSAEE+AA FLK++ KP+VGF+AG+TAPPGR MGHAGA+ISG Sbjct: 309 KEIKGIVMIGEIGGSAEEDAADFLKEKNTGCEAKPVVGFIAGQTAPPGRRMGHAGAIISG 368 Query: 264 GKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GKG A+DK+ A+++AG+ + +P +G +L+E Sbjct: 369 GKGAAKDKVAALEKAGVRMTANPCHLGSTLLE 400 >gi|167561702|ref|ZP_02354618.1| succinyl-CoA synthetase subunit alpha [Burkholderia oklahomensis EO147] gi|167568938|ref|ZP_02361812.1| succinyl-CoA synthetase subunit alpha [Burkholderia oklahomensis C6786] Length = 293 Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 158/297 (53%), Positives = 210/297 (70%), Gaps = 12/297 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGITVTRNPSEMGRLL 289 >gi|296157295|ref|ZP_06840131.1| succinyl-CoA synthetase, alpha subunit [Burkholderia sp. Ch1-1] gi|295892631|gb|EFG72413.1| succinyl-CoA synthetase, alpha subunit [Burkholderia sp. Ch1-1] Length = 293 Score = 305 bits (782), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 158/301 (52%), Positives = 212/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAYVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL- 117 + +VAEAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ +KAR+ Sbjct: 57 YASVAEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIELKARMR 116 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 E + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 AENRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTAIGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T++++M+GEIGG E AA+++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVIMIGEIGGPDEANAAEWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGITVTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|86158053|ref|YP_464838.1| succinyl-CoA synthetase alpha subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85774564|gb|ABC81401.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Anaeromyxobacter dehalogenans 2CP-C] Length = 341 Score = 305 bits (782), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 172/298 (57%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD+NT+VLVQG+TG AG+FHTEQ + Y T VV G+ P +G T + G VP+F Sbjct: 1 MSILVDRNTRVLVQGITGSAGSFHTEQMLAYG-TNVVSGVTPNRGGTRFQG---TVPIFH 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TVA A + T ANA+ I+VPP A DAIIE+ EA+I LIV ITEGIPVLDMVRV+ +E + Sbjct: 57 TVAAAVKETGANAAAIFVPPPFAADAIIEAAEADIELIVAITEGIPVLDMVRVRRYVESR 116 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPG++TP CKIGIMPG + R G +G++SRSGTL YEAV Q S GLGQST Sbjct: 117 PKTRLVGPNCPGVITPGQCKIGIMPGHVHRPGRIGVVSRSGTLNYEAVKQLSDLGLGQST 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +VGIGGDPV GT+F+ L+LF D T++++M+GEIGG EE+ A F+++ KP+ Sbjct: 177 SVGIGGDPVHGTDFVQALQLFEDDPDTDAVIMIGEIGGGEEEKGAAFVREHM----TKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPG+ MGHAGAVISGG G A+ K+ AM+EAG+ + P +GR++ + L Sbjct: 233 VGFIAGRTAPPGKRMGHAGAVISGGAGTADAKMAAMREAGVVVVDGPHLLGRAMKDAL 290 >gi|78067444|ref|YP_370213.1| succinyl-CoA synthetase subunit alpha [Burkholderia sp. 383] gi|107023584|ref|YP_621911.1| succinyl-CoA synthetase subunit alpha [Burkholderia cenocepacia AU 1054] gi|115352746|ref|YP_774585.1| succinyl-CoA synthetase subunit alpha [Burkholderia ambifaria AMMD] gi|116690668|ref|YP_836291.1| succinyl-CoA synthetase subunit alpha [Burkholderia cenocepacia HI2424] gi|170734012|ref|YP_001765959.1| succinyl-CoA synthetase subunit alpha [Burkholderia cenocepacia MC0-3] gi|171319343|ref|ZP_02908454.1| succinyl-CoA synthetase, alpha subunit [Burkholderia ambifaria MEX-5] gi|172061610|ref|YP_001809262.1| succinyl-CoA synthetase subunit alpha [Burkholderia ambifaria MC40-6] gi|206559350|ref|YP_002230111.1| succinyl-CoA synthetase subunit alpha [Burkholderia cenocepacia J2315] gi|254247314|ref|ZP_04940635.1| Succinyl-CoA synthetase, alpha subunit [Burkholderia cenocepacia PC184] gi|77968189|gb|ABB09569.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Burkholderia sp. 383] gi|105893773|gb|ABF76938.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Burkholderia cenocepacia AU 1054] gi|115282734|gb|ABI88251.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Burkholderia ambifaria AMMD] gi|116648757|gb|ABK09398.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Burkholderia cenocepacia HI2424] gi|124872090|gb|EAY63806.1| Succinyl-CoA synthetase, alpha subunit [Burkholderia cenocepacia PC184] gi|169817254|gb|ACA91837.1| succinyl-CoA synthetase, alpha subunit [Burkholderia cenocepacia MC0-3] gi|171095450|gb|EDT40420.1| succinyl-CoA synthetase, alpha subunit [Burkholderia ambifaria MEX-5] gi|171994127|gb|ACB65046.1| succinyl-CoA synthetase, alpha subunit [Burkholderia ambifaria MC40-6] gi|198035388|emb|CAR51264.1| succinyl-CoA ligase alpha-chain [Burkholderia cenocepacia J2315] Length = 293 Score = 305 bits (782), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 159/301 (52%), Positives = 212/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA+++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAEWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGITVTRNPSEMGRLLKKA 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|331212315|ref|XP_003307427.1| succinyl-CoA ligase subunit alpha [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309297830|gb|EFP74421.1| succinyl-CoA ligase subunit alpha [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 330 Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 158/281 (56%), Positives = 209/281 (74%), Gaps = 10/281 (3%) Query: 22 TFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPS 81 TFH ++ + Y T+ VGG+ PKK G +PVF +V +A + T +A+VIYVPP Sbjct: 49 TFHCKEGLAY-GTKFVGGVSPKKAGQQHLG----LPVFGSVTQAVKETKPDATVIYVPPP 103 Query: 82 GAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTPD---S 137 A DA+IE++E EI LIVCITEGIP D VR+ L+ +S SRL+GPNCPGI++PD Sbjct: 104 FAADAVIEAVENEIGLIVCITEGIPQQDEVRIAQVLKSQSKSRLVGPNCPGIMSPDVGGG 163 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 CKIGIMP +IF G +G++SRSGTLTYEAV QT++ GLGQ+ VGIGGDP GT+ IDVL Sbjct: 164 CKIGIMPSNIFSPGCIGVVSRSGTLTYEAVDQTTKVGLGQTLCVGIGGDPFPGTQHIDVL 223 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK-RGRKKPIVGFVAGKTAPPGRTMGH 256 + F+ D+AT+ IV++GEIGGS EEEAA++LK K R KP+V F+AG+TAPPGR MGH Sbjct: 224 KAFMEDDATKGIVLIGEIGGSMEEEAAEYLKQFNKSRSVPKPVVSFIAGRTAPPGRRMGH 283 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 AGA+ISGGKG AEDK+ A++EAG ++ SPA++G +++ + Sbjct: 284 AGAIISGGKGKAEDKVKALEEAGAVVSDSPAKLGDLMLKAM 324 >gi|224535693|ref|ZP_03676232.1| hypothetical protein BACCELL_00557 [Bacteroides cellulosilyticus DSM 14838] gi|224522693|gb|EEF91798.1| hypothetical protein BACCELL_00557 [Bacteroides cellulosilyticus DSM 14838] Length = 291 Score = 305 bits (781), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 152/289 (52%), Positives = 211/289 (73%), Gaps = 9/289 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T++LVQG+TG+ G FH + Y T VVGG P KG + G +PVF Sbjct: 1 MSILIDKSTRLLVQGITGRDGHFHAVKMKEYG-TNVVGGTSPGKGGSTVDG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA E+T ANAS+++VP S A DAI+E+ +A I LI+CI+EGIP LD+++ + Sbjct: 56 TMYEAVEKTQANASILFVPASYAADAIMEAADAGIKLIICISEGIPTLDVIKAYRFTQLK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P+ GI+PG++F+KG+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAMLIGPNCPGLISPEKSLAGILPGNVFKKGNVGVISRSGTLTYEIVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDPV G F ++LE+F D+ TESIVM+GEIGG+AEE AA+++K KP+V Sbjct: 176 IGMGGDPVVGLYFRELLEMFQNDKDTESIVMIGEIGGNAEELAAEYIKKHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 F+AG++APPG+ MGHAGA+ISG G AE+KI A+ AGI +A PA + Sbjct: 232 AFIAGQSAPPGKQMGHAGAIISGNSGSAEEKIAALTAAGIQVANEPAEV 280 >gi|33593523|ref|NP_881167.1| succinyl-CoA synthetase subunit alpha [Bordetella pertussis Tohama I] gi|33597219|ref|NP_884862.1| succinyl-CoA synthetase subunit alpha [Bordetella parapertussis 12822] gi|33601065|ref|NP_888625.1| succinyl-CoA synthetase subunit alpha [Bordetella bronchiseptica RB50] gi|33572879|emb|CAE42815.1| succinyl-CoA synthetase, alpha chain [Bordetella pertussis Tohama I] gi|33573646|emb|CAE37931.1| succinyl-CoA synthetase, alpha chain [Bordetella parapertussis] gi|33575500|emb|CAE32578.1| succinyl-CoA synthetase, alpha chain [Bordetella bronchiseptica RB50] gi|332382931|gb|AEE67778.1| succinyl-CoA synthetase subunit alpha [Bordetella pertussis CS] Length = 293 Score = 305 bits (781), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 160/301 (53%), Positives = 213/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCREYANGKAAFVAGVNPKKAGEDFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + V +AK T A SVIYVPP+GA AI E++EAE+ L++CITEGIPV DM+ VK R++ Sbjct: 57 YANVKDAKADTGATVSVIYVPPAGAAAAIWEAVEAELDLVICITEGIPVRDMLEVKNRMQ 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 +S+ L+GPNCPG++TPD KIGIMPG I RKG +GI+SRSGTLTYEAV Q ++ GLG Sbjct: 117 AMNSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGIVSRSGTLTYEAVAQVTELGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + +DVL+LF D T++++M+GEIGG E AAQ+ KD K Sbjct: 177 QSSAVGIGGDPINGLKHVDVLKLFNDDPDTDAVIMIGEIGGPDEVNAAQWAKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+ GI +P+ +G+ L + Sbjct: 233 KPVVGFIAGVTAPAGKRMGHAGALISGGADTADAKLEVMEACGIRTTRNPSEMGKLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|166154166|ref|YP_001654284.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis 434/Bu] gi|166155041|ref|YP_001653296.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|237805175|ref|YP_002889329.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis B/TZ1A828/OT] gi|301335410|ref|ZP_07223654.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis L2tet1] gi|165930154|emb|CAP03638.1| succinyl-CoA synthetase alpha chain [Chlamydia trachomatis 434/Bu] gi|165931029|emb|CAP06592.1| succinyl-CoA synthetase alpha chain [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|231273475|emb|CAX10391.1| succinyl-CoA synthetase alpha chain [Chlamydia trachomatis B/TZ1A828/OT] Length = 291 Score = 305 bits (781), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 152/294 (51%), Positives = 210/294 (71%), Gaps = 9/294 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 L+ K+ ++ QG+TGKAG+FHT Q + Y + VGG+ P KG + + +++P+F +V Sbjct: 4 LLSKDLPIITQGITGKAGSFHTTQCVAY-GSNFVGGVTPGKGGSQF----LDLPIFDSVL 58 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 EAK+ T AS+I+VPP A +AI E+ +A I LIVCITEGIP+ DM+ V + +EKS+S Sbjct: 59 EAKQATGCRASMIFVPPPFAAEAIFEAEDAGIELIVCITEGIPIKDMLEVASLMEKSASS 118 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 LIGPNCPG++ P CKIGIMPG I G VG++SRSGTLTYEAV+Q +Q +GQS +GI Sbjct: 119 LIGPNCPGVIKPGVCKIGIMPGYIHLPGKVGVVSRSGTLTYEAVWQLTQRKIGQSVCIGI 178 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDP+ GT FID L+ F D TE+++M+GEIGGSAEEEAA +++ + KP++ F+ Sbjct: 179 GGDPLNGTSFIDALQEFEKDSQTEAVLMIGEIGGSAEEEAADWIRQHS----SKPVIAFI 234 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 AG TAP G+ MGHAGA+ISG G A K A+++AG+ + SPA IG ++ +L Sbjct: 235 AGATAPKGKRMGHAGAIISGKSGDAFSKQEALRQAGVTVVESPALIGEAVASVL 288 >gi|288941231|ref|YP_003443471.1| succinyl-CoA synthetase subunit alpha [Allochromatium vinosum DSM 180] gi|288896603|gb|ADC62439.1| succinyl-CoA synthetase, alpha subunit [Allochromatium vinosum DSM 180] Length = 291 Score = 305 bits (780), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 172/297 (57%), Positives = 217/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD T+V+ QG TGK GTFH+EQAI Y T +VGG+ P KG +++ PVF Sbjct: 1 MSILVDAKTRVICQGFTGKQGTFHSEQAIAY-GTHLVGGVTPGKGGQR----HLDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A T A+AS+IYVP A DAI+E+ +A I +IVCITEGIPVLDM+RVKA L + Sbjct: 56 TVSDAVRETGADASMIYVPARFAADAILEAADAGIRVIVCITEGIPVLDMLRVKAALSGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG++TP +CKIGIMPG I + G VGI+SRSGTLTYEAV+QT+Q GLGQST Sbjct: 116 GAVLIGPNCPGVITPGACKIGIMPGHIHQPGRVGIVSRSGTLTYEAVYQTTQAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G +FID L LF D TE I++VGEIGG AEE AA+ ++ E KP+V Sbjct: 176 VGIGGDPIHGLDFIDCLRLFERDPQTEGIILVGEIGGEAEEAAAEVIRTEI----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+++GG G AE K A++ AG+ SPA++G L E L Sbjct: 232 AYIAGVTAPAGKRMGHAGAIVTGGAGTAEGKYAALEAAGVLTVRSPAQMGARLAERL 288 >gi|83720356|ref|YP_441203.1| succinyl-CoA synthetase subunit alpha [Burkholderia thailandensis E264] gi|167579960|ref|ZP_02372834.1| succinyl-CoA synthetase subunit alpha [Burkholderia thailandensis TXDOH] gi|167621353|ref|ZP_02389984.1| succinyl-CoA synthetase subunit alpha [Burkholderia thailandensis Bt4] gi|257140131|ref|ZP_05588393.1| succinyl-CoA synthetase subunit alpha [Burkholderia thailandensis E264] gi|83654181|gb|ABC38244.1| succinyl-CoA synthase, alpha subunit [Burkholderia thailandensis E264] Length = 293 Score = 305 bits (780), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 158/297 (53%), Positives = 210/297 (70%), Gaps = 12/297 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGIKVTRNPSEMGRLL 289 >gi|326919639|ref|XP_003206087.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial-like, partial [Meleagris gallopavo] Length = 337 Score = 305 bits (780), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 172/295 (58%), Positives = 226/295 (76%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH++QA+ Y T +VGG+ P KG G +PVF + Sbjct: 40 NLYINNSTKVICQGFTGKQGTFHSQQALEY-GTNLVGGVSPGKGGKTHLG----LPVFNS 94 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A+A+VIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL ++ Sbjct: 95 VKEAKEQTGASATVIYVPPPFAAAAINEAIDAEMPLVVCITEGIPQQDMVRVKHRLLRQN 154 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 155 KTRLVGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSFC 214 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D TE I+++GEIGG+AEE+AA FLK+ KP+V Sbjct: 215 VGIGGDPFNGTNFIDCLDVFLKDPHTEGIILIGEIGGNAEEDAAAFLKENNSGPNAKPVV 274 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 275 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTIYK 329 >gi|68163283|dbj|BAE02672.1| succinyl-CoA synthetase small subunit [Hydrogenobacter thermophilus] Length = 272 Score = 305 bits (780), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 156/278 (56%), Positives = 205/278 (73%), Gaps = 11/278 (3%) Query: 22 TFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPS 81 +FH Q Y TQVV G+ P KG G +PVF TV EA + T AN S+I+VPP+ Sbjct: 1 SFHAAQCKAY-GTQVVAGVTPGKGGQSVEG----IPVFNTVEEAVQETNANCSLIFVPPA 55 Query: 82 GAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS--SSRLIGPNCPGILTPDSCK 139 A DAI+E+++A I LIVCITEG+PV DM+ VK + K+ S++LIGPNCPG++TP K Sbjct: 56 FAADAIVEALDAGIELIVCITEGVPVKDMMMVKDYMRKNYPSAKLIGPNCPGVITPGEAK 115 Query: 140 IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL 199 +GIMPG +F++GSVGI+SRSGTLTYEA +Q + GLGQSTAVGIGGDPV G DV+ + Sbjct: 116 VGIMPGHVFKRGSVGIVSRSGTLTYEAAYQLTMVGLGQSTAVGIGGDPVHGLSHKDVISM 175 Query: 200 FLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGA 259 F D TE+I+++GEIGG+AEEEAA+++K KKP+ ++AG TAPPGR MGHAGA Sbjct: 176 FNEDPETEAILIIGEIGGTAEEEAAEYIKHHV----KKPVFAYIAGITAPPGRRMGHAGA 231 Query: 260 VISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +ISGG+G A+ K+ A++EAG+ + +PA IG+SL ELL Sbjct: 232 IISGGRGTAQAKMQALREAGVYVIENPAFIGKSLQELL 269 >gi|332826623|gb|EGJ99452.1| hypothetical protein HMPREF9455_00485 [Dysgonomonas gadei ATCC BAA-286] Length = 290 Score = 305 bits (780), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 150/299 (50%), Positives = 216/299 (72%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++++T+++VQG+TG+ G+FHT++ + Y T +VGG P KG T G VPVF Sbjct: 1 MSILINESTRLIVQGITGRDGSFHTKKMLEYG-TNIVGGTSPGKGGTEILG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T AN S+I+VP A DAI+E+ +A + LI+CI+EG+P LD V+ + Sbjct: 56 TVYEAVQQTQANTSIIFVPAKFAADAIMEAADAGVRLIICISEGLPTLDAVKAFRYTQMK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG+++PD C +GI+PG IF+KG++G++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GVMLIGPNCPGLMSPDKCLVGILPGQIFKKGNIGVISRSGTLTYEVVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDPV G + ++LE+ D T++IVM+GEIGG+AEE+AA++++ KP+V Sbjct: 176 VGMGGDPVVGLYYRELLEMLQNDPDTDAIVMIGEIGGNAEEQAAEYIRKHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+ AP G+ MGHAGA+I+GG G A DKI A++ AG+ +A P+ I L E LG+ Sbjct: 232 GFIAGQAAPQGKQMGHAGAIIAGGSGTAADKIAALEAAGVRVAKEPSEIPGLLKERLGN 290 >gi|332531167|ref|ZP_08407080.1| succinyl-CoA synthetase subunit alpha [Hylemonella gracilis ATCC 19624] gi|332039274|gb|EGI75687.1| succinyl-CoA synthetase subunit alpha [Hylemonella gracilis ATCC 19624] Length = 297 Score = 305 bits (780), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 157/306 (51%), Positives = 218/306 (71%), Gaps = 18/306 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKK-GSTYWTGGNVNVP 57 MSI ++KNTKV+ QG+TGK G FHTE+ Y + V G++PKK G + + N+P Sbjct: 1 MSIYINKNTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGESIF-----NIP 55 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 ++ +V EA ++T A SVIYVPP+GA DAI E++EA++ L +CITEGIPV DM+ V+ ++ Sbjct: 56 IYASVKEAAKQTGATVSVIYVPPAGAADAIWEAVEADLDLAICITEGIPVRDMLVVRNKM 115 Query: 118 EKSS------SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 ++ + L+GPNCPG++TPD KIGIMPG I +KG VG++SRSGTLTYEAV Q S Sbjct: 116 KEKEAKGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRVGVVSRSGTLTYEAVAQLS 175 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + G+GQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAA++ Sbjct: 176 ELGIGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAARW----C 231 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 K KKPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + +P+ +G+ Sbjct: 232 KANMKKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFKVTRNPSEMGK 291 Query: 292 SLVELL 297 L +L Sbjct: 292 LLKAML 297 >gi|330980736|gb|EGH78839.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 294 Score = 304 bits (779), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 169/299 (56%), Positives = 215/299 (71%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T ++N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVDTTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVVLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 V-GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V GGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+ Sbjct: 176 VGIGGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 VSYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 290 >gi|223634702|sp|O19069|SUCA_PIG RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor Length = 346 Score = 304 bits (779), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 173/294 (58%), Positives = 218/294 (74%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QG TGK GTFH++QA+ Y V ++ +PVF TV Sbjct: 50 LYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVG-----GTTPGKGGKTHLGLPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 225 GIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYK 338 >gi|320161459|ref|YP_004174683.1| succinyl-CoA synthetase alpha chain [Anaerolinea thermophila UNI-1] gi|319995312|dbj|BAJ64083.1| succinyl-CoA synthetase alpha chain [Anaerolinea thermophila UNI-1] Length = 287 Score = 304 bits (779), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 154/289 (53%), Positives = 206/289 (71%), Gaps = 7/289 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K T+++VQG+TG G FHT Q + Y T VV G+ P KG + G + PVF Sbjct: 1 MSILVNKQTRLVVQGITGNEGLFHTTQMVAY-GTNVVAGVTPGKGGEWVLEGKI--PVFD 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A E T AN SVI+VP A DAI+E+ +A + LIVCITEGIPV DM+RV++ L++ Sbjct: 58 TVRSAVETTGANTSVIFVPARFAPDAILEAADAGVSLIVCITEGIPVQDMMRVRSYLDQK 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPGILTP K+GI+P +I G++GI+SRSGTLTYE ++ G G ST Sbjct: 118 KVRLVGPNCPGILTPGEAKVGIIPNNISIPGNIGIVSRSGTLTYEVLYALKMAGKGASTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F+DVL++F AD T+ +VM+GEIGG+ EE+AA+F+ R KP+V Sbjct: 178 VGIGGDPINGTNFVDVLDMFEADPHTDQVVMIGEIGGTDEEKAAEFI----ARNMTKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 F+AG++APPG+ MGHAGA+I GG G A DK+ A++++G+ +A P I Sbjct: 234 AFIAGQSAPPGKRMGHAGAIIEGGTGTARDKVLALEKSGVRVANHPEEI 282 >gi|2258465|gb|AAB94003.1| succinyl-CoA synthetase alpha subunit [Sus scrofa] Length = 333 Score = 304 bits (779), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 173/294 (58%), Positives = 218/294 (74%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QG TGK GTFH++QA+ Y V ++ +PVF TV Sbjct: 37 LYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVG-----GTTPGKGGKTHLGLPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL + Sbjct: 92 KEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGK 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 152 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 212 GIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 272 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYK 325 >gi|330818196|ref|YP_004361901.1| succinyl-CoA synthetase subunit alpha [Burkholderia gladioli BSR3] gi|327370589|gb|AEA61945.1| succinyl-CoA synthetase subunit alpha [Burkholderia gladioli BSR3] Length = 293 Score = 304 bits (779), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 158/297 (53%), Positives = 209/297 (70%), Gaps = 12/297 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK+ T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKQETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+ +F D T+++VM+GEIGG E AA+++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMRMFNDDPDTDAVVMIGEIGGPDEATAAEWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ +GR L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGIKVTRNPSEMGRLL 289 >gi|312797175|ref|YP_004030097.1| succinyl-CoA synthetase alpha chain [Burkholderia rhizoxinica HKI 454] gi|312168950|emb|CBW75953.1| Succinyl-CoA synthetase alpha chain (EC 6.2.1.5) [Burkholderia rhizoxinica HKI 454] Length = 313 Score = 304 bits (779), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 156/301 (51%), Positives = 214/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 21 MSILINKDTKVITQGITGKTGQFHTRACREYANGRAAYVAGVNPKKAGEDFEG----IPI 76 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V EAK +T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ R+ Sbjct: 77 FGSVKEAKAQTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVRDRMR 136 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + + L+GPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q + GLG Sbjct: 137 RENRKTLLLGPNCPGVITPDELKIGIMPGHIHKKGRIGVVSRSGTLTYEAVAQLTALGLG 196 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T++++M+GEIGG E A+ ++KD K Sbjct: 197 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVIMIGEIGGPDEANASYWIKDNM----K 252 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L + Sbjct: 253 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMESCGIKVTKNPSEMGRLLKSV 312 Query: 297 L 297 L Sbjct: 313 L 313 >gi|188591291|ref|YP_001795891.1| succinyl-CoA synthetase subunit alpha [Cupriavidus taiwanensis LMG 19424] gi|170938185|emb|CAP63171.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Cupriavidus taiwanensis LMG 19424] Length = 293 Score = 304 bits (779), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 156/301 (51%), Positives = 215/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +AK +T A SVIYVPP+GA AI E+++A++ L+VCITEGIPV DM+ VK R+ Sbjct: 57 YASVKDAKAQTGATVSVIYVPPAGAAAAIWEAVDADLDLVVCITEGIPVRDMMEVKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + + L+GPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 RENKKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAHWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI + +P+ +GR L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLEIMEACGIKVTKNPSEMGRLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|195043171|ref|XP_001991567.1| GH12731 [Drosophila grimshawi] gi|193901325|gb|EDW00192.1| GH12731 [Drosophila grimshawi] Length = 334 Score = 304 bits (779), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 161/293 (54%), Positives = 212/293 (72%), Gaps = 6/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K TKV+VQG TGK TFH+ ++ Y T++VGG+ PKKG T +++ PVF Sbjct: 30 NLKINKETKVMVQGFTGKQATFHSTESKAY-GTKIVGGVSPKKGGTK----HLDAPVFKD 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + +A+VI++PP A I E+IE EI LIV ITEGIP +DMVR+ L + Sbjct: 85 VKEAVKELKPDATVIFIPPPNAAHGICEAIENEIGLIVVITEGIPQMDMVRIMQMLNCQE 144 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++ D CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 145 KSRLLGPNCPGIISADQCKIGIMPGHIHKRGLVGIVSRSGTLTYEAVHQTTNVGLGQTLC 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDP GT FID L++FL D+ T+ I+++GEIGG+AEEEAA++L KP+V Sbjct: 205 IGVGGDPFNGTNFIDALKIFLPDKETKGIILIGEIGGTAEEEAAEYLTKHNTGCEAKPVV 264 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG TAPPGR MGHAGA+ISGGKGGA DK+ A+K AG+ IA +P +G L Sbjct: 265 AFIAGITAPPGRRMGHAGAIISGGKGGAADKLKALKAAGVVIALNPCHLGTLL 317 >gi|91785105|ref|YP_560311.1| succinyl-CoA synthetase subunit alpha [Burkholderia xenovorans LB400] gi|91689059|gb|ABE32259.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Burkholderia xenovorans LB400] Length = 293 Score = 304 bits (779), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 158/301 (52%), Positives = 211/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAYVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL- 117 + +VAEAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ +KAR+ Sbjct: 57 YASVAEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIELKARMR 116 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 E + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 AENRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTAIGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T++++M+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVIMIGEIGGPDEANAAYWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGITVTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|326479950|gb|EGE03960.1| succinate-CoA ligase [Trichophyton equinum CBS 127.97] Length = 326 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 167/294 (56%), Positives = 213/294 (72%), Gaps = 12/294 (4%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GT + T VVGG +PKK G PVF + Sbjct: 35 NLRINADTKVIFQGFTGKQGTVNAR-----IGTNVVGGTNPKKAGETHLGK----PVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + T A AS I+VPPS A +I ESI AE+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 86 VEEAVKETGATASAIFVPPSVAAKSIEESIAAEVPLVVCITEGIPQHDMVRITDMLKSQN 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 146 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA FLK E K KP V Sbjct: 206 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAAFLKSENK--ANKPAV 263 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AG +APPGR MGHAGA++SGGKGGA+ KI+A+++AG+ + SPA +G++L+ Sbjct: 264 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALQDAGVIVERSPASLGKTLL 317 >gi|255019806|ref|ZP_05291882.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Acidithiobacillus caldus ATCC 51756] gi|254970735|gb|EET28221.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Acidithiobacillus caldus ATCC 51756] Length = 290 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 169/298 (56%), Positives = 214/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ ++T VL QG TGK G+FH++QA+ Y T++VGG+ P KG + G +PVF Sbjct: 1 MSILLHRDTAVLCQGFTGKQGSFHSQQAMAY-GTRMVGGVTPGKGGSEHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A T A ASVIYVP A DAI+E+ A I LIVCITEGIP+ DM+ V+ L S Sbjct: 56 TVADAVAATGATASVIYVPSPFAADAIVEAAAAGIELIVCITEGIPIHDMLAVRHYLAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPGI+TP + KIGIMPG+I R G VGI+SRSGTLTYEAV QT++ GLGQST Sbjct: 116 NARLIGPNCPGIITPGASKIGIMPGAIHRPGRVGIVSRSGTLTYEAVEQTTRLGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G F+DVL LF D TE ++MVGEIGG EE+AA F++ +KP+V Sbjct: 176 VGIGGDPLIGMNFVDVLALFEEDPQTEIVLMVGEIGGRLEEDAAAFIRAH----MRKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA+I GG G A +K + EAG+ SPA++G+ E+LG Sbjct: 232 AFIAGATAPKGKRMGHAGAIIDGGSGSAAEKYAVLAEAGVHCVDSPAQMGQKAAEILG 289 >gi|158520090|ref|YP_001527960.1| succinyl-CoA synthetase, alpha subunit [Desulfococcus oleovorans Hxd3] gi|158508916|gb|ABW65883.1| succinyl-CoA synthetase, alpha subunit [Desulfococcus oleovorans Hxd3] Length = 289 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 164/281 (58%), Positives = 203/281 (72%), Gaps = 10/281 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I VDK T+++VQG+TGK G FHT Q + Y T+VV G+ P KG G +PVF Sbjct: 1 MAIFVDKETRLVVQGITGKEGGFHTRQCVAY-GTKVVAGVTPGKGGQDVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A +T AN S+I+VPP+ A DAI E+ A + LIV ITEGIPVLDM+RVK L+ Sbjct: 56 TVADAVHQTGANCSMIFVPPAFAADAICEAAYAGVDLIVAITEGIPVLDMMRVKHILKGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS-VGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPGI+TP KIGIMPG I + G +G++SRSGTLTYE V Q + +G+GQ+T Sbjct: 116 PIRLIGPNCPGIITPGQAKIGIMPGPIHKPGGPIGVVSRSGTLTYEVVHQLTGQGIGQTT 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPV GT+FID L+ F D T IVMVGEIGG+AEE+AA+F+ E KP+ Sbjct: 176 CVGIGGDPVNGTDFIDCLKAFQNDPDTRGIVMVGEIGGNAEEKAAEFIATEV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 VGFVAG TAPPGR MGHAGA+ISG G AE K+ A++ AG+ Sbjct: 232 VGFVAGLTAPPGRRMGHAGAIISGKSGTAEGKLAALEGAGV 272 >gi|114778148|ref|ZP_01453035.1| succinyl-CoA synthetase, alpha subunit [Mariprofundus ferrooxydans PV-1] gi|114551566|gb|EAU54120.1| succinyl-CoA synthetase, alpha subunit [Mariprofundus ferrooxydans PV-1] Length = 289 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 166/297 (55%), Positives = 207/297 (69%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DK T+V+ QG TGK G+FH++Q I Y T VGG+ P KG ++N PVF Sbjct: 1 MSVLLDKQTRVICQGFTGKQGSFHSQQMIEY-GTTFVGGVTPGKGGQT----HLNRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VA+A + A A+VI+VPP A AIIE+ A I LI CITEGIPV DM+ VK +L Sbjct: 56 SVADAVAKEGAEATVIFVPPRFAAAAIIEAATAGIRLIACITEGIPVQDMLAVKRQLAAF 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPGI+TP KIGIMPG I G VG++SRSGTLTYEAV Q SQ GLGQST Sbjct: 116 DCTLIGPNCPGIITPGEAKIGIMPGHIHLPGRVGVISRSGTLTYEAVEQLSQTGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDP+ G FID L LF DE TE +VM+GEIGG+ EE AA F++D KP+V Sbjct: 176 IGMGGDPIHGMNFIDALRLFELDEQTEGVVMIGEIGGADEEHAAAFIRDHV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAP G+ MGHAGA+ISGGKG AE K NA++EAG+ + +P +G+ + LL Sbjct: 232 AFIAGATAPAGKRMGHAGAIISGGKGTAEAKFNALEEAGVSVEHNPTLLGKRMQALL 288 >gi|29346197|ref|NP_809700.1| succinyl-CoA synthetase alpha chain [Bacteroides thetaiotaomicron VPI-5482] gi|253568371|ref|ZP_04845782.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 1_1_6] gi|29338092|gb|AAO75894.1| succinyl-CoA synthetase alpha chain [Bacteroides thetaiotaomicron VPI-5482] gi|251842444|gb|EES70524.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 1_1_6] Length = 286 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 149/293 (50%), Positives = 212/293 (72%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+++VQG+TG+ G FH ++ Y T VVGG P KG T G +PVF Sbjct: 1 MSILIDKSTRLIVQGITGRDGLFHAKKMKEYG-TNVVGGTSPGKGGTEVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA ++T AN S+I+VP A D I+E+ +A I LIVCI EGIP LD+++ E+ Sbjct: 56 TMHEAVKQTQANTSIIFVPARFAADTIMEAADAGIRLIVCIAEGIPTLDVIKAHRFAEQR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPG+++P +GI+PG +F+KG+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAMLVGPNCPGLISPGESMVGILPGQVFQKGNVGVISRSGTLTYEIVYHLTTNGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+ +LE+F D T++IV++GEIGG+AEE+AA++++ KP+V Sbjct: 176 IGIGGDPVVGLHFLKLLEMFQNDPETKAIVLIGEIGGNAEEQAAEYIRSHV----NKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG++APPG+ MGHAGA+ISGG G A+DKI A++ AGI +A P+ I + L Sbjct: 232 AFIAGQSAPPGKQMGHAGAIISGGSGSAKDKIEALEAAGIRVAQEPSDIPKLL 284 >gi|167835577|ref|ZP_02462460.1| succinyl-CoA synthetase subunit alpha [Burkholderia thailandensis MSMB43] Length = 293 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 158/297 (53%), Positives = 209/297 (70%), Gaps = 12/297 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEATAAQWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ +GR L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGIKVTRNPSEMGRLL 289 >gi|332284599|ref|YP_004416510.1| succinyl-CoA synthetase subunit alpha [Pusillimonas sp. T7-7] gi|330428552|gb|AEC19886.1| succinyl-CoA synthetase subunit alpha [Pusillimonas sp. T7-7] Length = 293 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 159/301 (52%), Positives = 211/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G+HPKK + G VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTHMCREYANGKDAFVAGVHPKKAGENFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV +AK T A SVIYVPP+GA AI E++EA++ L++CITEGIPV DM+ ++ R+ Sbjct: 57 FGTVKDAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLVICITEGIPVRDMLELRNRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ GLG Sbjct: 117 DQNKKTLLLGPNCPGLITPDELKIGIMPGHISRKGRIGVVSRSGTLTYEAVAQLTELGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QSTAVGIGGDP+ G + IDVL++F D T+++VM+GEIGG E AA++ KD K Sbjct: 177 QSTAVGIGGDPINGLKHIDVLQMFNDDPDTDAVVMIGEIGGPDEVNAAEWAKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+ GI P+ +G+ L + Sbjct: 233 KPVVGFIAGVTAPAGKRMGHAGALISGGADTADAKLEIMEACGIRTTRDPSEMGKLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|307721037|ref|YP_003892177.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Sulfurimonas autotrophica DSM 16294] gi|306979130|gb|ADN09165.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Sulfurimonas autotrophica DSM 16294] Length = 291 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 156/299 (52%), Positives = 212/299 (70%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+VQG TGK GTFH EQ I Y T++VGG+ P KG G PVF Sbjct: 1 MSILVNKDTKVIVQGFTGKEGTFHAEQCIDY-GTKIVGGVTPNKGGETHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A S+++VPP+ DA++E+ +A I L V ITEG PV DM+ K K Sbjct: 56 TVKDAVDATGATVSMVFVPPAFVADAVMEAADAGIELAVIITEGAPVKDMMYAKQYATKH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + + IGPNCPGI+T D CKIGIMPG IF+KG+VG++S+SGTLTYE Q +EG G +TA Sbjct: 116 NMKTIGPNCPGIITADECKIGIMPGMIFKKGNVGLISKSGTLTYEGANQVVKEGFGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + +L +F AD TE+IVM+GEIGG E +AA+ +K++ KP+V Sbjct: 176 VGIGGDPIIGLSYKQILPMFEADPETEAIVMIGEIGGDLEIQAAKLIKEQI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP G+ MGHAGA+ISG G A++K++A++ AG+ + SPA IG+++ E+L + Sbjct: 232 AFIAGQTAPKGKRMGHAGAIISGSAGTAKEKMDALEAAGVKVVVSPAEIGKAVAEVLAA 290 >gi|9955019|pdb|1EUC|A Chain A, Crystal Structure Of Dephosphorylated Pig Heart, Gtp- Specific Succinyl-Coa Synthetase Length = 311 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 173/295 (58%), Positives = 218/295 (73%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 + VDKNTKV+ QG TGK GTFH++QA+ Y V ++ +PVF T Sbjct: 14 HLYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVG-----GTTPGKGGKTHLGLPVFNT 68 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A ASVIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL + Sbjct: 69 VKEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQG 128 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 129 KTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 188 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 189 VGIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVV 248 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 249 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYK 303 >gi|149200488|ref|ZP_01877501.1| succinyl-CoA synthetase subunit alpha [Lentisphaera araneosa HTCC2155] gi|149136411|gb|EDM24851.1| succinyl-CoA synthetase subunit alpha [Lentisphaera araneosa HTCC2155] Length = 290 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 154/293 (52%), Positives = 206/293 (70%), Gaps = 8/293 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV + T+V+VQG+TG G FHT Y VV G+ P KG G PV+ Sbjct: 1 MAILVTEKTRVVVQGITGSQGAFHTGLMKEYMDNFVVAGVTPGKGGQDLEG----TPVYN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA + N SVI+VPP A DAI+E+++AE+ L++CITEGIPVLDM++VK ++ S Sbjct: 57 SVAEAVKEQQVNTSVIFVPPPFAADAILEAVDAELDLVICITEGIPVLDMMKVKHAMKDS 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP KIGIMP I G +GI+SRSGTLTYEAV Q ++ GLG+ST Sbjct: 117 KTRLIGPNCPGVITPGIGKIGIMPADIHMPGKIGIISRSGTLTYEAVDQITKAGLGESTC 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT+ IDV++LF D TE IV++GEIGG AEE+AA ++K+ KP+V Sbjct: 177 VGIGGDPINGTQHIDVVKLFAEDPQTEGIVLIGEIGGDAEEQAALWIKEN----YDKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 GF+AG TAPPG+ MGHAGA++ GG +K+ +K+ GI + SP+ IG ++ Sbjct: 233 GFIAGLTAPPGKRMGHAGAIVGGGDRTGAEKVQYLKDCGIKMVQSPSDIGEAM 285 >gi|224373251|ref|YP_002607623.1| succinyl-CoA synthetase alpha chain [Nautilia profundicola AmH] gi|223588988|gb|ACM92724.1| succinyl-CoA synthetase alpha chain [Nautilia profundicola AmH] Length = 292 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 158/297 (53%), Positives = 210/297 (70%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+VQG TGK GTFH EQ + Y TQ+VGG+ P KG G PVF Sbjct: 1 MSILVNKDTKVIVQGFTGKEGTFHAEQCMAYG-TQIVGGVTPNKGGMTHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A S+I+VPP+ DA++E+ +A I L V ITEG PV DM+ K +K Sbjct: 56 TVEDAVKATGATVSMIFVPPAFVADAVMEAADAGIELAVIITEGAPVKDMMYAKHYAQKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 IGPNCPGI+T + CKIGIMPG+IF+KG+VG++S+SGTLTYEA Q +EG G +TA Sbjct: 116 GMNTIGPNCPGIITAEECKIGIMPGNIFKKGNVGLISKSGTLTYEASNQVVKEGFGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + +L +F AD TE+IVM+GEIGG E +AA+ +K++ KP+V Sbjct: 176 VGIGGDPIIGLSYKQLLPMFEADPETEAIVMIGEIGGDLEIQAAKLIKEQI----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAP G+ MGHAGA+ISG KG A +K+ A++EAG+ + SPA IG ++ + L Sbjct: 232 AFIAGQTAPKGKRMGHAGAIISGSKGTAAEKMAALEEAGVYVVKSPADIGATVAKAL 288 >gi|218199895|gb|EEC82322.1| hypothetical protein OsI_26601 [Oryza sativa Indica Group] Length = 432 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 163/262 (62%), Positives = 202/262 (77%), Gaps = 8/262 (3%) Query: 37 VGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIP 96 VGG+ PKKG T ++ +PVF +VAEAK T ANASVIYVPP A AI+E++EAE+ Sbjct: 171 VGGVTPKKGGTE----HLGLPVFNSVAEAKAETKANASVIYVPPPFAAAAIMEAMEAELD 226 Query: 97 LIVCITEGIPVLDMVRVKARLEKSS-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGI 155 L+VCITEGIP DMV+VKA L K S +RLIGPNCPGI+ P CKIGIMPG I + G VGI Sbjct: 227 LVVCITEGIPQHDMVKVKAALNKQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGI 286 Query: 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEI 215 +SRSGTLTYEAVFQT+ GLGQST VGIGGDP GT F+D LE F+ D TE IV++GEI Sbjct: 287 VSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEI 346 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 GG+AEE+AA F+++ +KP+V F+AG TAPPGR MGHAGA++SGGKG A+DKI A+ Sbjct: 347 GGTAEEDAAAFIQESKT---QKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKAL 403 Query: 276 KEAGICIAPSPARIGRSLVELL 297 +EAG+ + SPA+IG ++ E+ Sbjct: 404 REAGVTVVESPAKIGSTMFEIF 425 >gi|242793763|ref|XP_002482233.1| succinyl-CoA synthetase alpha subunit, putative [Talaromyces stipitatus ATCC 10500] gi|218718821|gb|EED18241.1| succinyl-CoA synthetase alpha subunit, putative [Talaromyces stipitatus ATCC 10500] Length = 330 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 171/293 (58%), Positives = 220/293 (75%), Gaps = 8/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ T+V+ QG TGK GTFH EQAI Y T+VVGG +PKK T +++ PVF T Sbjct: 35 NLRINSETRVIFQGFTGKQGTFHAEQAIAYG-TKVVGGTNPKKAGTT----HLDRPVFAT 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V++A + T A AS I+VPP A I E+I AEIPL+VCITEGIP DMVR+ L+ ++ Sbjct: 90 VSDAVKETGATASAIFVPPPLAAAGIEEAIAAEIPLVVCITEGIPQHDMVRITDILKTQN 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 150 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTHAGLGQSLV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA+FLK E K + KP V Sbjct: 210 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAEFLKSENK--QNKPTV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L Sbjct: 268 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALEAAGVIVERSPAHLGKAL 320 >gi|295677588|ref|YP_003606112.1| succinyl-CoA synthetase, alpha subunit [Burkholderia sp. CCGE1002] gi|307730897|ref|YP_003908121.1| succinyl-CoA synthetase subunit alpha [Burkholderia sp. CCGE1003] gi|295437431|gb|ADG16601.1| succinyl-CoA synthetase, alpha subunit [Burkholderia sp. CCGE1002] gi|307585432|gb|ADN58830.1| succinyl-CoA synthetase, alpha subunit [Burkholderia sp. CCGE1003] Length = 293 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 156/301 (51%), Positives = 211/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAYVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +VAEAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ +K R+ Sbjct: 57 YASVAEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEIKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 RENRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTAIGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T++++M+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVIMIGEIGGPDEANAAHWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGIKVTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|183221439|ref|YP_001839435.1| succinyl-CoA synthetase subunit alpha [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911527|ref|YP_001963082.1| succinyl-CoA synthetase subunit alpha [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776203|gb|ABZ94504.1| Succinyl-CoA synthetase, alpha subunit [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779861|gb|ABZ98159.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 296 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 156/295 (52%), Positives = 208/295 (70%), Gaps = 7/295 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGG-NVNVPVF 59 M++LVD+NT+V+VQG+TGK G+FH Q + Y T+VV G+ P KG WT + PV Sbjct: 1 MAVLVDENTRVVVQGITGKEGSFHATQMLEY-GTKVVAGVTPGKGGQTWTSEFGKSAPVR 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 T+ +A + ANA+VI+VPP A DAI+E I AEIPL+VCITEGIP DM++V + L Sbjct: 60 NTIKDAMKEDGANAAVIFVPPPFAADAILEGIFAEIPLVVCITEGIPTHDMLKVYSVLRN 119 Query: 120 SSSRLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S ++L+GPNCPG++ P + K+GIMPG I G++GI+SRSGTLTYE+V + GLGQS Sbjct: 120 SKTKLVGPNCPGVINPRYNVKMGIMPGFIHTPGNIGIVSRSGTLTYESVASLTAAGLGQS 179 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDPV G ++ + L D TE IVM+GEIGG++EEEAA ++K KKP Sbjct: 180 TCIGIGGDPVPGMNHVEAVRLLNEDPDTEGIVMIGEIGGTSEEEAAAYIKAHV----KKP 235 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 +VGF+AG+TAPPG+ MGHAGA+ISGG G A KI AM++AG+ I +G + Sbjct: 236 VVGFIAGQTAPPGKRMGHAGAIISGGMGTATSKIAAMQDAGVSICAHIGEVGEKM 290 >gi|124010173|ref|ZP_01694830.1| succinyl-CoA synthetase alpha chain [Microscilla marina ATCC 23134] gi|123983764|gb|EAY24186.1| succinyl-CoA synthetase alpha chain [Microscilla marina ATCC 23134] Length = 294 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 156/300 (52%), Positives = 213/300 (71%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG G+FH Q I Y + VVGG+ P KG ++ PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGSFHAGQMIEY-GSNVVGGVTPGKGGMT----HLERPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A+ S+I+VPP+ A DAI+E+ +A I +I+ ITEGIP+LDMV+ K ++ Sbjct: 56 TVKEAVKATGADVSIIFVPPAFASDAIMEAADAGIKVIIAITEGIPILDMVKAKQYIQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP K+GIMPG I G +GI+SRSGTLTYEAV Q ++ GLGQST Sbjct: 116 DVRLVGPNCPGVITPGEAKVGIMPGFIHNPGRIGIVSRSGTLTYEAVDQITKAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT + +EL + D T++I+M+GEIGGS E EAA ++K + G +KP+V Sbjct: 176 IGIGGDPVIGTTTKEAVELLMNDPDTDAIIMIGEIGGSMEAEAANWIKAD---GNRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAP GR MGHAGA+I G AE K+ M+E G+ + SPA IG ++V+ L S+ Sbjct: 233 GFIAGQTAPKGRRMGHAGAIIGGKDDTAEAKMRIMRECGLHVVASPAEIGATMVKALESV 292 >gi|90109572|pdb|2FPG|A Chain A, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa Synthetase In Complex With Gdp Length = 305 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 173/295 (58%), Positives = 218/295 (73%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 + VDKNTKV+ QG TGK GTFH++QA+ Y V ++ +PVF T Sbjct: 8 HLYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVG-----GTTPGKGGKTHLGLPVFNT 62 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A ASVIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL + Sbjct: 63 VKEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQG 122 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 123 KTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 182 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 183 VGIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVV 242 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 243 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYK 297 >gi|145590010|ref|YP_001156607.1| succinyl-CoA synthetase subunit alpha [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048416|gb|ABP35043.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 297 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 155/306 (50%), Positives = 213/306 (69%), Gaps = 18/306 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKK-GSTYWTGGNVNVP 57 MSIL++KNTKV+ QG+TGK G FHTE+ Y + V G++PKK G + + N+P Sbjct: 1 MSILINKNTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGESIF-----NIP 55 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 ++ TV EA ++T A SVIYVPP GA AI E++EA++ ++CITEGIPV DM+ V+ ++ Sbjct: 56 IYGTVKEAAQQTGATTSVIYVPPPGAAAAIWEAVEADLDFVICITEGIPVRDMLEVRNKM 115 Query: 118 EKSSSR------LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + L+GPNCPGI+TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q + Sbjct: 116 HAKEAAGGKKTLLLGPNCPGIITPDELKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLT 175 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 GLGQSTAVGIGGDP+ G + ID++ +F D T++++M+GEIGG E EAA++ K+ Sbjct: 176 AIGLGQSTAVGIGGDPINGLKHIDIMRMFNEDPETDAVIMIGEIGGPDEAEAARWCKEN- 234 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 KKP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + +P+ + Sbjct: 235 ---MKKPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAVMEECGFKVTKNPSEMAA 291 Query: 292 SLVELL 297 L +L Sbjct: 292 LLKAML 297 >gi|255349226|ref|ZP_05381233.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis 70] gi|255503763|ref|ZP_05382153.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis 70s] gi|255507444|ref|ZP_05383083.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis D(s)2923] gi|289525868|emb|CBJ15350.1| succinyl-CoA synthetase alpha chain [Chlamydia trachomatis Sweden2] gi|296435453|gb|ADH17631.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis E/150] gi|296439170|gb|ADH21323.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis E/11023] Length = 291 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 152/294 (51%), Positives = 210/294 (71%), Gaps = 9/294 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 L+ K+ ++ QG+TGKAG+FHT Q + Y + VGG+ P KG + + +++P+F +V Sbjct: 4 LLSKDLPIITQGITGKAGSFHTTQCVAY-GSNFVGGVTPGKGGSQF----LDLPIFDSVL 58 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 EAK+ T AS+I+VPP A +AI E+ +A I LIVCITEGIP+ DM+ V + +EKS+S Sbjct: 59 EAKQATGCRASMIFVPPPFAVEAIFEAEDAGIELIVCITEGIPIKDMLEVASLMEKSASS 118 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 LIGPNCPG++ P CKIGIMPG I G VG++SRSGTLTYEAV+Q +Q +GQS +GI Sbjct: 119 LIGPNCPGVIKPGVCKIGIMPGYIHLPGKVGVVSRSGTLTYEAVWQLTQRKIGQSVCIGI 178 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDP+ GT FID L+ F D TE+++M+GEIGGSAEEEAA +++ + KP++ F+ Sbjct: 179 GGDPLNGTSFIDALQEFENDSQTEAVLMIGEIGGSAEEEAADWIRQHS----SKPVIAFI 234 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 AG TAP G+ MGHAGA+ISG G A K A+++AG+ + SPA IG ++ +L Sbjct: 235 AGATAPKGKHMGHAGAIISGKSGDAFSKQEALRQAGVTVVESPALIGEAVASVL 288 >gi|148266010|ref|YP_001232716.1| succinyl-CoA synthetase, alpha subunit [Geobacter uraniireducens Rf4] gi|146399510|gb|ABQ28143.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Geobacter uraniireducens Rf4] Length = 297 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 163/298 (54%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K++K++VQG+TG++G FHT+Q Y +++V G+ P KG + G +PVF Sbjct: 1 MSILLNKDSKIVVQGITGRSGLFHTQQCRDY-GSKIVAGVTPGKGGIHIEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A+ S+I+VPP GA DAI+E+ +A I L VCITEGIPV DMV + LE Sbjct: 56 TVDEAVHYTNADVSMIFVPPPGAADAILEAADAGIELAVCITEGIPVRDMVLARRVLEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP CK+GIMPG I +KG +G++SRSGTLTYEAV Q + GLGQST Sbjct: 116 KMRLVGPNCPGVITPGECKVGIMPGHIHKKGKIGVVSRSGTLTYEAVKQLTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G +FIDVL+LF D TE++ M+GEIGG AEEEAA ++K+ KKP+ Sbjct: 176 VGIGGDPIIGLKFIDVLKLFNEDPQTEAVFMIGEIGGGAEEEAAYWIKENM----KKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPG+ MGHAGA+I+GGKG AEDKI ++E G+ ++ SP ++G ++ ++G Sbjct: 232 AFIAGVTAPPGKRMGHAGAIITGGKGKAEDKIKTLQECGVAVSTSPTKMGETMQSVMG 289 >gi|251772186|gb|EES52756.1| succinyl-CoA synthetase, alpha subunit [Leptospirillum ferrodiazotrophum] Length = 305 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 165/302 (54%), Positives = 217/302 (71%), Gaps = 14/302 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD++T+V+VQG+TGK G++H Y T+V+GG+ P KG T G PV+ Sbjct: 1 MSILVDRSTRVIVQGITGKEGSYHATACREY-GTRVLGGVTPGKGGTVHEG----FPVWD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 +V +A + + S+I+VPP+ A DAI+E+ +A + LIVCITEGIPV DM+RV+ L Sbjct: 56 SVRDAVDAVHPDVSLIFVPPAFAADAILEAADAGVELIVCITEGIPVQDMMRVRRILDIR 115 Query: 118 --EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 E + RLIGPNCPGI+TPD KIGIMPG I ++G VG++SRSGTLTYEAV+Q +Q GL Sbjct: 116 HEEGETVRLIGPNCPGIITPDGAKIGIMPGYIHKRGKVGVVSRSGTLTYEAVWQLTQLGL 175 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G+ST VGIGGDPV+G F+DVL LF D TE+IVM+GEIGG EE AA F + Sbjct: 176 GESTCVGIGGDPVRGLNFLDVLALFEKDPETEAIVMIGEIGGDDEERAAAFARAHM---- 231 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP++GF+AG TAPPGR MGHAGA++SGGKG A DK+ A++ GI + +P+ IG+++ E Sbjct: 232 TKPVIGFIAGLTAPPGRRMGHAGAIVSGGKGSARDKMKALESYGIIVVDNPSIIGKTVAE 291 Query: 296 LL 297 L Sbjct: 292 TL 293 >gi|269925409|ref|YP_003322032.1| succinyl-CoA synthetase, alpha subunit [Thermobaculum terrenum ATCC BAA-798] gi|269789069|gb|ACZ41210.1| succinyl-CoA synthetase, alpha subunit [Thermobaculum terrenum ATCC BAA-798] Length = 290 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 161/296 (54%), Positives = 209/296 (70%), Gaps = 11/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNT++LVQG+TG+ G+FHT+Q + Y T VV G+ P G VPV+ Sbjct: 1 MSILVDKNTRLLVQGITGREGSFHTQQMVEY-GTNVVAGVTPGAAGREVCG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T AN S++YVP A DA+ E+ A I LIVCITE IP +D V++ + + Sbjct: 56 TVREAVEATGANTSIVYVPAPFAPDAVYEAASAGISLIVCITEHIPAVDEVKMYHYVREK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+ TP K+GI+PG+I ++G VGI+SRSGTLTYEAV + +GQST Sbjct: 116 GSRLIGPNCPGLTTPGEAKVGIIPGNIHKRGPVGIVSRSGTLTYEAVAALTAADIGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F +VLE+F D T ++V++GEIGG+AEEEAA+++ R KP+V Sbjct: 176 VGIGGDPIVGTSFREVLEMFEDDPETHAVVLIGEIGGNAEEEAAEYI-----RQMTKPVV 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 F+AG+TAPPGR MGHAGA+ISGG G AE KI A++ A IA +P++I LVE+ Sbjct: 231 AFIAGRTAPPGRRMGHAGAIISGGSGTAESKIRALEGANAHIAETPSQIAE-LVEV 285 >gi|94309415|ref|YP_582625.1| succinyl-CoA synthetase subunit alpha [Cupriavidus metallidurans CH34] gi|93353267|gb|ABF07356.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Cupriavidus metallidurans CH34] Length = 293 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 156/301 (51%), Positives = 216/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +AKE+T A SVIYVPP+GA AI E+++A++ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YASVKDAKEQTGATVSVIYVPPAGAAAAIWEAVDADLDLVVCITEGIPVRDMMEVKDKMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 RQNKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++K+ K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAYWIKENM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI + +P+ +GR L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLEIMEACGIKVTKNPSEMGRLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|71892112|ref|YP_277844.1| succinyl-CoA synthetase, alpha chain [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796218|gb|AAZ40969.1| succinyl-CoA synthetase, alpha chain [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 293 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 153/291 (52%), Positives = 207/291 (71%), Gaps = 9/291 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TK++ QG TGK +FH++QA+ Y T++VGG+ P KG + G +P+F Sbjct: 1 MSILVNKDTKIICQGFTGKHASFHSQQALNY-GTKIVGGVTPGKGGSIHLG----LPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T+A S+IYVP DAI+ESI A I LIVCITEGIP+LDM+ +K +L+K Sbjct: 56 TVGEAINNTSATTSIIYVPAPFCKDAILESIHAGIKLIVCITEGIPILDMLLIKQQLKKH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++ +IGPNCPGI+TP CK+GIMP I G VGI+SRSGTLTYE V QT+ GLGQST Sbjct: 116 NTCMIGPNCPGIITPGQCKLGIMPSDIHNPGCVGIISRSGTLTYEVVKQTTDLGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G++FID+L LF D T +VM+GEIGG +EE+AA+++ + KKP++ Sbjct: 176 VGIGGDPILGSDFIDILSLFEQDPQTSLMVMIGEIGGRSEEKAAKYI----NKYIKKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 ++AG TAP G+ MGHAGA+ISG A +K + ++G+ I + IG+ Sbjct: 232 AYIAGTTAPKGKRMGHAGAIISGIGSTAHEKYEILSQSGVHIVNNFINIGQ 282 >gi|195438794|ref|XP_002067317.1| GK16245 [Drosophila willistoni] gi|194163402|gb|EDW78303.1| GK16245 [Drosophila willistoni] Length = 351 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 159/293 (54%), Positives = 215/293 (73%), Gaps = 6/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + K TKV++QG TGK GTFH + A Y T +VGG+ P KG T +++ PVF T Sbjct: 36 NLKIKKETKVMIQGFTGKQGTFHAKAAQEY-GTNIVGGVSPSKGGTT----HLDKPVFKT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + +A+ I++PP+ AG+ I +IE EI LIV ITEGIP +DMVR+ L + Sbjct: 91 VKEAVKELKPDATAIFIPPNNAGEGICAAIENEIGLIVAITEGIPQVDMVRIMQMLNCQE 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++P+ CKIGIMP I ++G+VGI+SRSGTLTYEAV QT+ GLGQS Sbjct: 151 KSRLLGPNCPGIISPEQCKIGIMPSHIHKRGTVGIVSRSGTLTYEAVLQTTSVGLGQSLC 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G GGDP GT FID L++FLAD T+ I+++GEIGGSAEE+AA +LK+ KP+V Sbjct: 211 IGCGGDPFNGTSFIDGLKIFLADPETKGIILIGEIGGSAEEDAADYLKEHNSGCNAKPVV 270 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG++APPGR MGHAGA+ISGGKG A+DK+ A+++AG+ +A +P +G+ L Sbjct: 271 SFIAGQSAPPGRRMGHAGAIISGGKGAAKDKVAALEKAGVIVAKNPCHMGQLL 323 >gi|319956116|ref|YP_004167379.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nitratifractor salsuginis DSM 16511] gi|319418520|gb|ADV45630.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nitratifractor salsuginis DSM 16511] Length = 290 Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 160/297 (53%), Positives = 209/297 (70%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+VQG TGK GTFH Q I Y T++VGG+ P KG G PVF Sbjct: 1 MSILVNKDTKVIVQGFTGKEGTFHASQCIDY-GTKIVGGVTPGKGGQEHLG----RPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A S+I+VPP+ DA++E+ EA I L V ITEG PV DM+ K K Sbjct: 56 TVKEAVDSTGATVSMIFVPPAFVADAVMEAAEAGIDLAVIITEGAPVKDMMYAKMYATKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + IGPNCPGI+T + CKIGIMPG+IF+KG+VG++S+SGTLTYEA Q QEG G +TA Sbjct: 116 GMKTIGPNCPGIITAEECKIGIMPGNIFKKGNVGLISKSGTLTYEASHQVVQEGYGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + +L +F AD TE+IVM+GEIGG E +AA ++K+ KP+V Sbjct: 176 VGIGGDPIIGLSYKQLLPMFEADPETEAIVMIGEIGGDLEIQAAAYIKENI----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAP G+ MGHAGA+ISGG G A +K+ A++ AG+ + SPA IG+++ E+L Sbjct: 232 AFIAGQTAPKGKRMGHAGAIISGGSGTAAEKMAALEAAGVKVVVSPADIGKAVKEVL 288 >gi|157835422|pdb|2NU6|A Chain A, C123aa Mutant Of E. Coli Succinyl-Coa Synthetase gi|157835424|pdb|2NU6|D Chain D, C123aa Mutant Of E. Coli Succinyl-Coa Synthetase Length = 288 Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 170/296 (57%), Positives = 215/296 (72%), Gaps = 9/296 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 SIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF T Sbjct: 1 SILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFNT 55 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 VREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPN PG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST V Sbjct: 116 VRMIGPNAPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+VG Sbjct: 176 GIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MG AGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 YIAGVTAPKGKRMGXAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 287 >gi|323527260|ref|YP_004229413.1| succinyl-CoA synthetase subunit alpha [Burkholderia sp. CCGE1001] gi|323384262|gb|ADX56353.1| succinyl-CoA synthetase, alpha subunit [Burkholderia sp. CCGE1001] Length = 293 Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 156/301 (51%), Positives = 211/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAYVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +VAEAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ +K R+ Sbjct: 57 YASVAEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEIKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 RENRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTAIGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T++++M+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVIMIGEIGGPDEANAAYWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGIKVTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|195130923|ref|XP_002009900.1| GI14987 [Drosophila mojavensis] gi|193908350|gb|EDW07217.1| GI14987 [Drosophila mojavensis] Length = 337 Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 164/293 (55%), Positives = 209/293 (71%), Gaps = 6/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K TK+LVQG TGK TFH E+A Y T +VGG PKKG T ++++PVF Sbjct: 36 NLKINKETKLLVQGFTGKQATFHAEEAQKY-GTTIVGGTSPKKGGTT----HMDLPVFKN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + +A+VI++PPS A I +IE E+ LIV ITEGIP +DMVR+ L + Sbjct: 91 VKEAVKAVKPDATVIFIPPSTAAIGICAAIENEVGLIVAITEGIPQVDMVRILQMLHSQE 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++P+ CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 151 KSRLLGPNCPGIISPEQCKIGIMPGHIHKRGCVGIVSRSGTLTYEAVHQTTNVGLGQTLC 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDP GT FID L +FL D+ T+ I+++GEIGGSAEEEAA FLK KP+V Sbjct: 211 IGVGGDPFNGTNFIDALNIFLYDKETKGIILIGEIGGSAEEEAADFLKANNSGCDAKPVV 270 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG TAPPGR MGHAGA+ISGGKG A DK+ A+K AG IA +P +G L Sbjct: 271 AFIAGVTAPPGRRMGHAGAIISGGKGAASDKLKALKAAGALIALNPNHLGTIL 323 >gi|312220828|emb|CBY00769.1| similar to succinyl-coa ligase subunit alpha [Leptosphaeria maculans] Length = 328 Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 171/295 (57%), Positives = 219/295 (74%), Gaps = 8/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ TKVL QG TGK GTFH +QAI Y T+VVGG +PKK T ++++PVF Sbjct: 33 NLRINSETKVLFQGFTGKQGTFHAQQAIEYG-TKVVGGTNPKKAGTQ----HLSLPVFKN 87 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + T A A+ I+VPP A +I E+I AE+PLIV ITEGIP DMVR+ L+ ++ Sbjct: 88 VAEAIKETQATATAIFVPPPVAAASIEEAIAAEVPLIVTITEGIPQHDMVRITDMLKSQN 147 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR++GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 148 KSRMVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 207 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA FLK+ KP+V Sbjct: 208 VGIGGDPFSGTNFIDCLKVFLQDEETDGIIMIGEIGGSAEEDAADFLKE--YNTANKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG +APPGR MGHAGA++SGGKG A KINA++ AG+ + SPA++G +L + Sbjct: 266 SFIAGISAPPGRRMGHAGAIVSGGKGDANSKINALEAAGVVVERSPAKLGSTLYD 320 >gi|157835434|pdb|2NU9|A Chain A, C123at Mutant Of E. Coli Succinyl-Coa Synthetase Orthorhombic Crystal Form gi|157835436|pdb|2NU9|D Chain D, C123at Mutant Of E. Coli Succinyl-Coa Synthetase Orthorhombic Crystal Form gi|157835438|pdb|2NU9|F Chain F, C123at Mutant Of E. Coli Succinyl-Coa Synthetase Orthorhombic Crystal Form gi|157835440|pdb|2NU9|H Chain H, C123at Mutant Of E. Coli Succinyl-Coa Synthetase Orthorhombic Crystal Form Length = 288 Score = 302 bits (774), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 170/296 (57%), Positives = 215/296 (72%), Gaps = 9/296 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 SIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF T Sbjct: 1 SILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFNT 55 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 VREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPN PG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST V Sbjct: 116 VRMIGPNTPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+VG Sbjct: 176 GIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MG AGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 YIAGVTAPKGKRMGXAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 287 >gi|152992173|ref|YP_001357894.1| succinyl-CoA synthase, alpha subunit [Sulfurovum sp. NBC37-1] gi|151424034|dbj|BAF71537.1| succinyl-CoA synthase, alpha subunit [Sulfurovum sp. NBC37-1] Length = 290 Score = 302 bits (773), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 159/297 (53%), Positives = 208/297 (70%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+VQG TGK G+FH EQ I Y T +VGG+ P KG G PVF Sbjct: 1 MSILVNKDTKVIVQGFTGKEGSFHAEQCIDY-GTNIVGGVTPNKGGQVHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + T A S+I+VPP+ GDA++E+ EA I L V ITEG PV DM KA K Sbjct: 56 TVAEAVKETGATVSMIFVPPAFVGDAVMEAAEAGIELAVIITEGAPVKDMQAAKAYATKH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + IGPNCPGI+T + CKIGIMPG IF+KG+VG++S+SGTLTYE Q G G +TA Sbjct: 116 GMKTIGPNCPGIITAEECKIGIMPGMIFKKGNVGLISKSGTLTYEGANQVCNVGYGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + +L +F AD TE IVM+GEIGG E +AA+ +K++ KP+V Sbjct: 176 VGIGGDPIIGLSYKQILPMFEADPDTECIVMIGEIGGDLEIQAAKLIKEQI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAP G+TMGHAGA++SG G A++K+ A++ AG+ + SPA IG+++ E+L Sbjct: 232 AFIAGQTAPKGKTMGHAGAIVSGSAGTAKEKMEALEAAGVKVVVSPAEIGKAVKEVL 288 >gi|219119890|ref|XP_002180696.1| ligase succinate-coa ligase [Phaeodactylum tricornutum CCAP 1055/1] gi|217408169|gb|EEC48104.1| ligase succinate-coa ligase [Phaeodactylum tricornutum CCAP 1055/1] Length = 309 Score = 302 bits (773), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 178/297 (59%), Positives = 222/297 (74%), Gaps = 8/297 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKN++V+ QG TGK GTFH+ QAI Y T +VGG+ PKKG ++ +PVF TV Sbjct: 7 VWVDKNSRVICQGFTGKQGTFHSTQAIDY-GTNMVGGVTPKKGGQE----HLGLPVFNTV 61 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSS 121 EA + +ASVIYVPP A AI+++IEAEI L+VCITEGIP DM RVK L + Sbjct: 62 QEAVDGVQPDASVIYVPPPYAAQAILDAIEAEIGLVVCITEGIPQQDMARVKHALRLQDR 121 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I R G +G++SRSGTLTYEAV+QT+ GLGQST V Sbjct: 122 TRLIGPNCPGIIKPGECKIGIMPGYIHRPGKIGVVSRSGTLTYEAVWQTTVTGLGQSTCV 181 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE F D TE I+M+GEIGGSAEEEAA++LK+ KP+VG Sbjct: 182 GIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAAEWLKEYGD--PNKPVVG 239 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA+I+GGKGGAE+K A++ AG+ ++ SPAR+G +++E +G Sbjct: 240 FIAGLTAPPGRRMGHAGAIIAGGKGGAEEKFQALESAGVHVSRSPARLGATMLEAMG 296 >gi|73540237|ref|YP_294757.1| succinyl-CoA synthetase subunit alpha [Ralstonia eutropha JMP134] gi|72117650|gb|AAZ59913.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ralstonia eutropha JMP134] Length = 293 Score = 302 bits (773), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 155/297 (52%), Positives = 212/297 (71%), Gaps = 12/297 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +AK +T A SVIYVPP+GA AI E+++A++ L+VCITEGIPV DM+ VK R+ Sbjct: 57 YASVKDAKAQTGATVSVIYVPPAGAAAAIWEAVDADLDLVVCITEGIPVRDMMEVKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 RENKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAYWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI + +P+ + R L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLEIMEACGITVTKNPSEMARLL 289 >gi|113866576|ref|YP_725065.1| succinyl-CoA synthetase subunit alpha [Ralstonia eutropha H16] gi|113525352|emb|CAJ91697.1| Succinyl-CoA synthetase alpha chain [Ralstonia eutropha H16] Length = 293 Score = 302 bits (773), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 157/301 (52%), Positives = 215/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL- 117 + +V +AK +T A SVIYVPP+GA AI E+++A++ L+VCITEGIPV DM+ VK R+ Sbjct: 57 YASVKDAKAQTGATVSVIYVPPAGAAAAIWEAVDADLDLVVCITEGIPVRDMMEVKDRMR 116 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 EK + L+GPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REKKKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++K+ K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAYWIKENM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI + +P+ +GR L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLEIMEACGIKVTKNPSEMGRLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|225713784|gb|ACO12738.1| Succinyl-CoA ligase subunit alpha, mitochondrial precursor [Lepeophtheirus salmonis] Length = 294 Score = 302 bits (773), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 156/271 (57%), Positives = 206/271 (76%), Gaps = 6/271 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++++ K++KV+ QG TGK GTFH++QAI Y T +VGG+ PKK G +PVF Sbjct: 29 MNMMLTKDSKVICQGFTGKQGTFHSQQAIDY-GTNMVGGVSPKKAGQTHLG----LPVFG 83 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 +V EA A+A+VIYVPP GA AI+E+I+AE+PLIVCITEG+P DMV+V +L+ + Sbjct: 84 SVKEAMTEVKADATVIYVPPPGAAAAILEAIDAEVPLIVCITEGVPQHDMVKVIRKLKNQ 143 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S+LIGPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT+Q GLGQ+ Sbjct: 144 DKSKLIGPNCPGIIAPNKCKIGIMPGHIHQEGCIGVVSRSGTLTYEAVHQTTQVGLGQTL 203 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP GT FID L++FL D T+ I+M+GEIGG+AEE+AA +L++ +KP+ Sbjct: 204 CIGIGGDPFNGTNFIDCLDIFLKDPKTKGIIMIGEIGGAAEEKAADYLQEHNSGANQKPV 263 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 V F+AG TAPPGR MGHAGA+ISGGKG A + Sbjct: 264 VSFIAGVTAPPGRRMGHAGAIISGGKGTAHN 294 >gi|228473900|ref|ZP_04058642.1| succinyl-CoA synthetase, alpha subunit [Capnocytophaga gingivalis ATCC 33624] gi|228274741|gb|EEK13575.1| succinyl-CoA synthetase, alpha subunit [Capnocytophaga gingivalis ATCC 33624] Length = 290 Score = 301 bits (772), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 166/297 (55%), Positives = 215/297 (72%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K+LVQG TG GTFH EQ I Y T VVGG+ P KG G PVF Sbjct: 1 MSVLVNKNSKILVQGFTGSEGTFHAEQMIQYG-TNVVGGVTPNKGGQTHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E+ A+ S+I+VPP+ A DAI+E+ EA I +I+ ITEGIPV DMV+V A ++ Sbjct: 56 SVKEAVEKVGADTSIIFVPPAFAADAIMEAAEAGIKVIITITEGIPVADMVKVAAYIKDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP+ K+GIMPG +F+KG VGI+S+SGTLTYEA Q ++GLG STA Sbjct: 116 DCRLIGPNCPGVITPEEAKVGIMPGFVFKKGKVGIVSKSGTLTYEAADQVVRQGLGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +ELF+ D TE IVM+GEIGG E EAA+++K+ G KKP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELFMNDPETELIVMIGEIGGQLEVEAARWIKE---TGNKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGA++ G + AE K M+E GI + SPA+IG + E+L Sbjct: 233 GFIAGETAPKGRTMGHAGAIVGGSEDTAEAKKRIMRECGIHVVDSPAKIGEKVKEVL 289 >gi|210076220|ref|XP_504333.2| YALI0E24013p [Yarrowia lipolytica] gi|199426960|emb|CAG79932.2| YALI0E24013p [Yarrowia lipolytica] Length = 328 Score = 301 bits (772), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 175/296 (59%), Positives = 223/296 (75%), Gaps = 7/296 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ NTKVL QG TGK GTFH +QAI Y T+VVGG +PKK G +P+F T Sbjct: 30 NLKINSNTKVLFQGFTGKQGTFHAQQAIDY-GTKVVGGTNPKKAGQSHLG----LPIFGT 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + T +AS I+VPP A +I E+IEAE+PL+VCITEGIP DM+RV L+ +S Sbjct: 85 VAEAMKETGCDASAIFVPPPLAAASIEEAIEAELPLVVCITEGIPQHDMIRVVDMLKTQS 144 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMP SI ++G +G++SRSGTLTYEAV QT+Q GLGQS Sbjct: 145 KTRLVGPNCPGIIAPGQCKIGIMPSSIHKRGRIGVVSRSGTLTYEAVNQTTQVGLGQSLV 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK-RGRKKPI 239 VGIGGDP GT FID L++FL DE T+ I+M+GEIGG+AEEEAA FLK + R KP+ Sbjct: 205 VGIGGDPFAGTNFIDCLKVFLEDENTDGIIMIGEIGGTAEEEAADFLKQYNQTREVPKPV 264 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG +APPGR MGHAGA+ISGGKGGA KI+A++ AG+ + PSPAR+G++L + Sbjct: 265 CSFIAGVSAPPGRRMGHAGAIISGGKGGAGSKISALEAAGVAVEPSPARLGKTLYD 320 >gi|171464129|ref|YP_001798242.1| succinyl-CoA synthetase, alpha subunit [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193667|gb|ACB44628.1| succinyl-CoA synthetase, alpha subunit [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 297 Score = 301 bits (772), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 153/305 (50%), Positives = 210/305 (68%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++KNTKV+ QG+TGK G FHTE+ Y + V G++PKK + N+P+ Sbjct: 1 MSILINKNTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGEFI----FNIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TV EA ++T A SVIYVPP GA AI E++EA++ ++CITEGI V DM+ V+ ++ Sbjct: 57 YGTVKEAAQQTGATTSVIYVPPPGAAAAIWEAVEADLDFVICITEGISVRDMLEVRNKMH 116 Query: 119 KS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPGI+TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q + Sbjct: 117 AKEAAGGKKTLLLGPNCPGIITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLTA 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 LGQSTAVGIGGDP+ G + ID++++F D T++++M+GEIGG E EAA++ KD Sbjct: 177 IDLGQSTAVGIGGDPINGLKHIDIMKMFNEDPETDAVIMIGEIGGPDEAEAARWCKDN-- 234 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + +P+ + Sbjct: 235 --MKKPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAVMEECGFKVTRNPSEMAAL 292 Query: 293 LVELL 297 L +L Sbjct: 293 LKAML 297 >gi|72386785|ref|XP_843817.1| succinyl-CoA synthetase alpha subunit [Trypanosoma brucei TREU927] gi|62360279|gb|AAX80696.1| succinyl-CoA synthetase alpha subunit, putative [Trypanosoma brucei] gi|70800349|gb|AAZ10258.1| succinyl-CoA synthetase alpha subunit, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 301 Score = 301 bits (772), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 170/297 (57%), Positives = 226/297 (76%), Gaps = 11/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFTT 61 + +++NTKV+ QG+TGK GT+HTEQAI Y T++VGG++PKK GSTY +N+PVF T Sbjct: 9 LWINQNTKVICQGITGKHGTYHTEQAIAY-GTKMVGGVNPKKAGSTY-----LNLPVFGT 62 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEA + T A+A+VIYVP A+ E++ AE+PL+V ITEGIP DM+RVK+ L ++ Sbjct: 63 VAEAVKNTGADATVIYVPAPHCAAAVEEALVAEVPLVVVITEGIPQWDMLRVKSMLLSQN 122 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P+ CKIGIMPG I +KG +G++SRSGTLTYEAV QT+ LGQS Sbjct: 123 KTRLIGPNCPGIIRPEECKIGIMPGHIHKKGCIGVVSRSGTLTYEAVAQTTAVNLGQSLC 182 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT ID ++L+L D TE I+++GEIGG+AEEEAA+F+K+ KKP+V Sbjct: 183 VGIGGDPFNGTNMIDCVKLYLEDPGTEGIILIGEIGGTAEEEAAEFIKNHPI---KKPLV 239 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+ G TAPPGR MGHAGAV+SGG+G A+ K+ A++ AG +A SPA++G + EL+ Sbjct: 240 TFIGGATAPPGRRMGHAGAVVSGGQGTAKGKMEALEAAGAVVAHSPAQLGALMAELM 296 >gi|261326909|emb|CBH09882.1| succinyl-CoA synthetase alpha subunit, putative [Trypanosoma brucei gambiense DAL972] Length = 301 Score = 301 bits (771), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 170/297 (57%), Positives = 226/297 (76%), Gaps = 11/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFTT 61 + +++NTKV+ QG+TGK GT+HTEQAI Y T++VGG++PKK GSTY +N+PVF T Sbjct: 9 LWINQNTKVICQGITGKHGTYHTEQAIAY-GTKMVGGVNPKKAGSTY-----LNLPVFGT 62 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEA + T A+A+VIYVP A+ E++ AE+PL+V ITEGIP DM+RVK+ L ++ Sbjct: 63 VAEAVKNTGADATVIYVPAPHCAAAVEEALVAEVPLVVVITEGIPQWDMLRVKSMLLSQN 122 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P+ CKIGIMPG I +KG +G++SRSGTLTYEAV QT+ LGQS Sbjct: 123 KTRLIGPNCPGIIRPEECKIGIMPGHIHKKGCIGVVSRSGTLTYEAVAQTTAVNLGQSLC 182 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT ID ++L+L D TE I+++GEIGG+AEEEAA+F+K+ KKP+V Sbjct: 183 VGIGGDPFNGTNMIDCVKLYLEDPGTEGIILIGEIGGTAEEEAAEFIKNHPI---KKPLV 239 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+ G TAPPGR MGHAGAV+SGG+G A+ K+ A++ AG +A SPA++G + EL+ Sbjct: 240 TFIGGATAPPGRRMGHAGAVVSGGQGTAKGKMEALEAAGAVVAHSPAQLGALMAELM 296 >gi|82594494|ref|XP_725448.1| succinyl-CoA synthetase subunit alpha [Plasmodium yoelii yoelii str. 17XNL] gi|23480460|gb|EAA17013.1| Succinyl-CoA synthetase alpha subunit [Plasmodium yoelii yoelii] Length = 330 Score = 301 bits (771), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 166/308 (53%), Positives = 218/308 (70%), Gaps = 16/308 (5%) Query: 8 NTKVLVQGLTG-------KAGTFHTEQAILYCQTQVVGGIHP-KKGSTYWTGGN-VNVPV 58 N + + TG ++G+FHT +A+ Y T++VGG++P KKGST+ + N +PV Sbjct: 23 NISLFCKHFTGTKLFCYQQSGSFHTTEALKY-GTKMVGGVNPSKKGSTWASIDNKYTLPV 81 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V EAKE+T ASVIYVP A +AIIESIE+EIPLIVCITEGI DM+ VKA L Sbjct: 82 FGSVLEAKEKTNCYASVIYVPHQHAKNAIIESIESEIPLIVCITEGICQHDMLEVKACLN 141 Query: 119 KSS-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 S SRLIGPNCPGI+ P KIGI+P I +KG VGI+SRSGTLTYE V QT++ GLGQ Sbjct: 142 MSKKSRLIGPNCPGIIKPGESKIGILPSHIHKKGCVGIVSRSGTLTYEGVNQTTKVGLGQ 201 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL-----KDEAK 232 ST +GIGGDP GT FID L+LFL D+ T+ I+++GEIGG+AEE+ A++L D K Sbjct: 202 STCIGIGGDPFHGTNFIDCLKLFLEDDETKCILLIGEIGGNAEEQVAEWLIENNVDDPEK 261 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 + +KK I F+AGK APPG+ MGHAGA+ISGGKG A+ KI A++ AG+ + +P +IG Sbjct: 262 KKKKKNIFAFIAGKCAPPGKRMGHAGALISGGKGTADGKIEALRNAGVHVVINPTKIGEE 321 Query: 293 LVELLGSL 300 + ++ + Sbjct: 322 IYNVMKDI 329 >gi|170693428|ref|ZP_02884587.1| succinyl-CoA synthetase, alpha subunit [Burkholderia graminis C4D1M] gi|170141583|gb|EDT09752.1| succinyl-CoA synthetase, alpha subunit [Burkholderia graminis C4D1M] Length = 293 Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 156/301 (51%), Positives = 211/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAYVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +VAEAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ +K R+ Sbjct: 57 YASVAEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEIKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 RENRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTAIGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T++++M+GEIGG E AA+++K K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVIMIGEIGGPDEANAAEWIKGNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGIKVTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|78777249|ref|YP_393564.1| succinyl-CoA synthetase alpha subunit [Sulfurimonas denitrificans DSM 1251] gi|78497789|gb|ABB44329.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Sulfurimonas denitrificans DSM 1251] Length = 290 Score = 301 bits (770), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 155/297 (52%), Positives = 210/297 (70%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+VQG TGK G+FH EQ + Y T++VGG+ P KG T G PVF Sbjct: 1 MSILVNKDTKVIVQGFTGKEGSFHAEQCLAY-GTKIVGGVTPNKGGTEHLGQ----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A S+I+VPP+ DA++E+ +A I L V ITEG PV DM KA K Sbjct: 56 TVKEAVKTTGATVSMIFVPPAFVADAVMEAADAGIELAVIITEGAPVRDMQAAKAYAIKH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + + IGPNCPGI+T + CKIGIMPG IF+KG++G++S+SGTLTYE Q ++G G STA Sbjct: 116 NMKTIGPNCPGIITAEECKIGIMPGMIFKKGNIGLISKSGTLTYEGANQVVKQGFGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + +L +F AD T +IVM+GEIGG E +AA ++K+ KP+V Sbjct: 176 VGIGGDPIIGLSYKQLLPMFEADPETHAIVMIGEIGGDLEIQAAAYIKEHI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAP G+ MGHAGA++SGG G A +K+ A+++AG+ + SPA IG+++ E+L Sbjct: 232 AFIAGQTAPAGKRMGHAGAIVSGGAGTAAEKMAALEDAGVKVVVSPADIGKAIAEVL 288 >gi|194768527|ref|XP_001966363.1| GF22035 [Drosophila ananassae] gi|190617127|gb|EDV32651.1| GF22035 [Drosophila ananassae] Length = 356 Score = 301 bits (770), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 158/293 (53%), Positives = 214/293 (73%), Gaps = 6/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V+K+TKV+VQG TGK TFH++++I Y T++VGG+ P KG T +++ PVF Sbjct: 47 NLKVNKDTKVMVQGFTGKQATFHSKESIKY-GTKIVGGVSPNKGGTQ----HLDKPVFKD 101 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + +A+VI++PP A + I +IE EI LIV ITEGIP +DMVR+ L + Sbjct: 102 VAEAVKELKPDATVIFIPPPSAAEGICAAIENEIGLIVAITEGIPQVDMVRIMQMLRCQE 161 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPG+++PD CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 162 KSRLLGPNCPGLISPDQCKIGIMPGHIHKRGCVGIVSRSGTLTYEAVHQTTGVGLGQALC 221 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G GGDP GT FID L +FL D+ + I+++GEIGG+AEEEAA +L KP+V Sbjct: 222 IGCGGDPFNGTSFIDALRIFLPDKEVKGIILIGEIGGTAEEEAADYLMANNTGCEAKPVV 281 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG+TAPPGR MGHAGA+ISGGKG A DK+ A+++AG+ +A +P +G +L Sbjct: 282 AFIAGQTAPPGRRMGHAGAIISGGKGAASDKVKALEKAGVKVATNPCHMGITL 334 >gi|149194473|ref|ZP_01871569.1| Succinyl-CoA ligase, alpha subunit [Caminibacter mediatlanticus TB-2] gi|149135217|gb|EDM23697.1| Succinyl-CoA ligase, alpha subunit [Caminibacter mediatlanticus TB-2] Length = 292 Score = 301 bits (770), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 156/297 (52%), Positives = 211/297 (71%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+VQG TGK GTFH+EQ + Y T +VGG+ P KG G PVF Sbjct: 1 MSILVNKDTKVIVQGFTGKEGTFHSEQCMAY-GTNIVGGVTPNKGGMTHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A S+I+VPP+ DA++E+ +A + L V ITEG PV DM+ K K Sbjct: 56 TVEEAVKATGATVSMIFVPPAFVADAVMEAADAGVELAVIITEGAPVKDMMYAKHYAVKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + IGPNCPGI+T + CKIGIMPG+IF+KG+VG++S+SGTLTYEA Q +EGLG +TA Sbjct: 116 GMKTIGPNCPGIITAEECKIGIMPGNIFKKGNVGLISKSGTLTYEASNQVVKEGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L +F D+ TE+IVM+GEIGG E +AA+ +K++ KP++ Sbjct: 176 VGIGGDPIIGLSYKELLPMFEEDDETEAIVMIGEIGGDLEIQAAKLIKEKI----SKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAP G+ MGHAGA+ISG KG A +K+ A++EAG + SPA IG ++ + L Sbjct: 232 AFIAGQTAPKGKRMGHAGAIISGSKGTAAEKMAALEEAGAYVVKSPADIGATVAKAL 288 >gi|62185363|ref|YP_220148.1| succinyl-CoA synthetase subunit alpha [Chlamydophila abortus S26/3] gi|62148430|emb|CAH64198.1| succinyl-CoA synthetase alpha chain [Chlamydophila abortus S26/3] Length = 291 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 162/299 (54%), Positives = 215/299 (71%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M + K ++ QG+TGKAG+FHTEQ + Y + VGG+ P KG T ++N+ V+ Sbjct: 1 MFCSLSKKIPIITQGITGKAGSFHTEQCLAY-GSNFVGGVTPGKGGTK----HLNLHVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK+ T A++I+VPP+ A +AIIE+ +A I LIVCITEGIPV DM+ V ++ S Sbjct: 56 SVLEAKQATNCRATMIFVPPAYAAEAIIEAEDAGIELIVCITEGIPVKDMLEVSHVMQHS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPGI+ P +CKIGIMPG I G+VG++SRSGTLTYEAV+Q +Q +GQS Sbjct: 116 SSRLIGPNCPGIIKPGACKIGIMPGYIHLPGNVGVVSRSGTLTYEAVWQLTQRSIGQSVC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FIDVLE F D TE I+M+GEIGGSAEEEAA++++ KP++ Sbjct: 176 IGIGGDPLNGTSFIDVLEEFQHDPQTELILMIGEIGGSAEEEAAEWIQAYC----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP G+ MGHAGA+ISG G A+ K A++ AG+C+ SPA IG ++ LL S Sbjct: 232 AFIAGETAPKGKRMGHAGAIISGNSGDAKSKKEALRRAGVCVVESPALIGETVETLLRS 290 >gi|255036670|ref|YP_003087291.1| succinyl-CoA synthetase, alpha subunit [Dyadobacter fermentans DSM 18053] gi|254949426|gb|ACT94126.1| succinyl-CoA synthetase, alpha subunit [Dyadobacter fermentans DSM 18053] Length = 292 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 164/298 (55%), Positives = 219/298 (73%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K++VQG TG G+FH +Q I Y T VVGG+ P KG ++ PVF Sbjct: 1 MSVLVNKNSKIIVQGFTGSEGSFHAQQMIEY-GTNVVGGVTPGKGGL----SHLERPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A T A+ S+I+VPP+ A DAI+E+ +A I +IVCITEGIP DM++ K ++ Sbjct: 56 TVDLAVRATGADVSIIFVPPAFAADAIMEAADAGIGVIVCITEGIPTKDMMQAKEYIKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPGI+T + CK+GIMPG IF+KG++G++S+SGTLTYEAV Q S+ GLGQ+TA Sbjct: 116 NTRLIGPNCPGIITAEECKVGIMPGFIFKKGTIGLVSKSGTLTYEAVDQLSRAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D+ TE+IVM+GEIGGS E +AA ++K G KKP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDDETEAIVMIGEIGGSMEADAAAYIKS---TGNKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GR MGHAGA+I G AE KI MKE+GI +A SPA IG +++ LG Sbjct: 233 GFIAGQTAPKGRRMGHAGAIIGGADDTAEAKIRIMKESGIFVAESPALIGETMLLALG 290 >gi|15605557|ref|NP_220343.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis D/UW-3/CX] gi|76789567|ref|YP_328653.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis A/HAR-13] gi|237803254|ref|YP_002888448.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis B/Jali20/OT] gi|255311662|ref|ZP_05354232.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis 6276] gi|255317963|ref|ZP_05359209.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis 6276s] gi|3329291|gb|AAC68419.1| Succinyl-CoA Synthetase, Alpha [Chlamydia trachomatis D/UW-3/CX] gi|76168097|gb|AAX51105.1| succinyl-CoA synthetase alpha chain [Chlamydia trachomatis A/HAR-13] gi|231274488|emb|CAX11284.1| succinyl-CoA synthetase alpha chain [Chlamydia trachomatis B/Jali20/OT] gi|296436377|gb|ADH18551.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis G/9768] gi|296437308|gb|ADH19478.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis G/11222] gi|296438236|gb|ADH20397.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis G/11074] gi|297140737|gb|ADH97495.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis G/9301] gi|297748951|gb|ADI51497.1| Succinyl-CoA synthetase alpha chain [Chlamydia trachomatis D-EC] gi|297749831|gb|ADI52509.1| Succinyl-CoA synthetase alpha chain [Chlamydia trachomatis D-LC] Length = 291 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 152/294 (51%), Positives = 208/294 (70%), Gaps = 9/294 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 L+ K+ ++ QG+TGKAG+FHT Q + Y + VGG+ P KG + + +++P+F +V Sbjct: 4 LLSKDLPIITQGITGKAGSFHTTQCVAY-GSNFVGGVTPGKGGSQF----LDLPIFDSVL 58 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 EAK+ T AS+I+VPP A +AI E+ +A I LIVCITEGIP+ DM+ V + +EKS+S Sbjct: 59 EAKQATGCRASMIFVPPPFAAEAIFEAEDAGIELIVCITEGIPIKDMLEVASLMEKSASS 118 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 LIGPNCPG++ P CKIGIMPG I G VG++SRSGTLTYEAV+Q +Q +GQS +GI Sbjct: 119 LIGPNCPGVIKPGVCKIGIMPGYIHLPGKVGVVSRSGTLTYEAVWQLTQRKIGQSVCIGI 178 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDP+ GT FID L+ F D TE+++M+GEIGGSAEEEAA D ++ KP++ F+ Sbjct: 179 GGDPLNGTSFIDALQEFEKDSQTEAVLMIGEIGGSAEEEAA----DWTRQHSSKPVIAFI 234 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 AG TAP G+ MGHAGA+ISG G A K A+++AG+ + S A IG ++ +L Sbjct: 235 AGATAPKGKRMGHAGAIISGKSGDAFSKQEALRQAGVTVVESLALIGEAVASVL 288 >gi|186475212|ref|YP_001856682.1| succinyl-CoA synthetase subunit alpha [Burkholderia phymatum STM815] gi|184191671|gb|ACC69636.1| succinyl-CoA synthetase, alpha subunit [Burkholderia phymatum STM815] Length = 293 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 156/301 (51%), Positives = 209/301 (69%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T++++M+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVIMIGEIGGPDEANAAYWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M GI + +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLEIMDACGIKVTKNPSEMARLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|15618882|ref|NP_225168.1| succinyl-CoA synthetase subunit alpha [Chlamydophila pneumoniae CWL029] gi|15836506|ref|NP_301030.1| succinyl-CoA synthetase subunit alpha [Chlamydophila pneumoniae J138] gi|16752057|ref|NP_445423.1| succinyl-CoA synthetase subunit alpha [Chlamydophila pneumoniae AR39] gi|33242341|ref|NP_877282.1| succinyl-CoA synthetase subunit alpha [Chlamydophila pneumoniae TW-183] gi|4377300|gb|AAD19111.1| Succinyl-CoA Synthetase, Alpha [Chlamydophila pneumoniae CWL029] gi|7189798|gb|AAF38673.1| succinyl-Coa synthetase, alpha chain [Chlamydophila pneumoniae AR39] gi|8979347|dbj|BAA99181.1| succinyl-CoA synthetase, alpha [Chlamydophila pneumoniae J138] gi|33236852|gb|AAP98939.1| succinate-CoA ligase alpha chain [Chlamydophila pneumoniae TW-183] gi|269302764|gb|ACZ32864.1| succinyl-CoA synthetase, alpha subunit [Chlamydophila pneumoniae LPCoLN] Length = 293 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 159/293 (54%), Positives = 212/293 (72%), Gaps = 9/293 (3%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + KNT ++ QG+TGKAG+FHTEQ + Y T VGG+ P KG T W +++PV+ +V E Sbjct: 5 LSKNTPIITQGITGKAGSFHTEQCLAY-GTNFVGGVTPGKGGTLW----LDLPVYDSVLE 59 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 AK+ T A++I+VPP A +AI+E+ EA I LIVCITEGIPV DM+ V ++ S+S+L Sbjct: 60 AKQATGCRATMIFVPPPYAAEAILEAEEAGIELIVCITEGIPVRDMLEVARVMDNSTSQL 119 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPNCPGI+ P CKIGIMPG I G++G++SRSGTLTYEAV+Q +Q +GQS VGIG Sbjct: 120 IGPNCPGIIKPGECKIGIMPGYIHLPGNIGVVSRSGTLTYEAVWQLTQLKIGQSICVGIG 179 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 GDP+ GT FIDVL+ D TE I+M+GEIGGSAEEEAA +++ KP+V F+A Sbjct: 180 GDPLNGTSFIDVLQALEEDPYTELILMIGEIGGSAEEEAAAWIQAHC----TKPVVAFIA 235 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G TAP G+ MGHAGA+ISG G A+ KI ++E+G+ + SPA IG+++ +L Sbjct: 236 GVTAPKGKRMGHAGAIISGNSGDAKSKIQVLRESGVTVVESPAHIGKTVDAVL 288 >gi|237718599|ref|ZP_04549080.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 2_2_4] gi|229452059|gb|EEO57850.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 2_2_4] Length = 286 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 148/293 (50%), Positives = 213/293 (72%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+++VQG+TG+ G FH ++ Y T+VVGG P KG T G +PVF Sbjct: 1 MSILIDKSTRLIVQGITGRDGLFHAKKMKEYG-TKVVGGTSPGKGGTDVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A E+T AN S+I+VP A DAI+E+ +A I LIVCI EGIP LD+++ +E+ Sbjct: 56 TMYDAVEQTKANTSIIFVPARFAADAIMEAADAGIRLIVCIAEGIPTLDVIKAHQFVEQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P +GI+PG +F +G+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAMLIGPNCPGLISPGKSMVGILPGQVFLEGNVGVISRSGTLTYEIVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F +LE+F D TE+IV++GEIGG+AEE+AA+++++ KP+V Sbjct: 176 IGIGGDPVVGLHFRQLLEMFQNDPETEAIVLIGEIGGNAEEQAAEYIRNNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG++APPG+ MGHAGA+ISG G A++KI +++ AGI +A P+ I + L Sbjct: 232 AFIAGQSAPPGKQMGHAGAIISGSSGSAKEKIKSLEAAGIRVAQEPSDIPKLL 284 >gi|209518326|ref|ZP_03267151.1| succinyl-CoA synthetase, alpha subunit [Burkholderia sp. H160] gi|209501245|gb|EEA01276.1| succinyl-CoA synthetase, alpha subunit [Burkholderia sp. H160] Length = 293 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 155/301 (51%), Positives = 211/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAYVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +VAEAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ +K R+ Sbjct: 57 YASVAEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEIKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 RENRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTAIGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T++++M+GEIGG E AA+++K K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVIMIGEIGGPDEANAAEWIKGNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGIKVTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|198282729|ref|YP_002219050.1| succinyl-CoA synthetase subunit alpha [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666152|ref|YP_002424923.1| succinyl-CoA synthetase, alpha subunit [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247250|gb|ACH82843.1| succinyl-CoA synthetase, alpha subunit [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518365|gb|ACK78951.1| succinyl-CoA synthetase, alpha subunit [Acidithiobacillus ferrooxidans ATCC 23270] Length = 290 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 172/298 (57%), Positives = 214/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ ++T+V+ QG TGK GTFH++QA+ Y T++VGG+ P KG + ++++PVF Sbjct: 1 MSILLSRDTRVICQGFTGKQGTFHSQQAVAY-GTRMVGGVTPGKGGSR----HLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A ASVIYVP A DAIIE+ A I LIVCITEGIPV DM+ VK L + Sbjct: 56 TVADAVQDTGAEASVIYVPSPFAADAIIEAAAAGIQLIVCITEGIPVHDMLMVKHYLAGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + RLIGPNCPGI+TP KIGIMPG+I + G VGI+SRSGTLTYEAV QT++ GLGQST Sbjct: 116 AVRLIGPNCPGIITPGQSKIGIMPGAIHQPGRVGIVSRSGTLTYEAVEQTTRLGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G FI+VL LF AD TE IVMVGEIGG EE+AA F++ +KP+V Sbjct: 176 VGIGGDPLIGMSFIEVLALFEADPQTEVIVMVGEIGGRMEEDAAGFIQAHV----RKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 FVAG TAP G+ MGHAGA+I GG G A K ++ AG+ SPA +G E+LG Sbjct: 232 AFVAGSTAPRGKRMGHAGAIIDGGAGTAAAKYAVLEAAGVHCVHSPADLGTRAAEVLG 289 >gi|327399555|ref|YP_004340424.1| succinyl-CoA synthetase subunit alpha [Hippea maritima DSM 10411] gi|327182184|gb|AEA34365.1| succinyl-CoA synthetase, alpha subunit [Hippea maritima DSM 10411] Length = 295 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 162/301 (53%), Positives = 214/301 (71%), Gaps = 16/301 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ---TQVVGGIHPKKGSTYWTGGNV-NV 56 M++ V + ++VLVQG+TGK G++H L C+ T++V G+ P KG G V ++ Sbjct: 1 MAVCVYRTSRVLVQGITGKEGSYHA----LACKDYGTKIVAGVTPGKG-----GQKVGDI 51 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF TV EA + T N S+I+VPP A DAI+E++ + I IVCITEGIPVLDMV+VK Sbjct: 52 PVFNTVEEAVKETHPNVSLIFVPPPFAADAILEAVGSGIKTIVCITEGIPVLDMVKVKRV 111 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 +EK LIGPNCPGI+TP + KIGIMPG IF +GSVGI+SRSGTL YE Q ++ GLG Sbjct: 112 IEKEGVTLIGPNCPGIITPGATKIGIMPGHIFTRGSVGIISRSGTLLYETADQITRAGLG 171 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QST VGIGGDP+ GT++I L+ F D TE+++MVGEIGG+AEE+AA+F+ AK G K Sbjct: 172 QSTCVGIGGDPIVGTDYIFWLKKFEEDPETEAVMMVGEIGGNAEEKAAEFI---AKGGIK 228 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+ F+AG+TAPPGR MGHAGA+I G G AE K A+++AG+ +P IG + ++ Sbjct: 229 KPVFAFIAGRTAPPGRRMGHAGAIIMGKSGTAESKYEALRKAGVHTIENPGYIGEMIAKV 288 Query: 297 L 297 L Sbjct: 289 L 289 >gi|160884541|ref|ZP_02065544.1| hypothetical protein BACOVA_02526 [Bacteroides ovatus ATCC 8483] gi|260174864|ref|ZP_05761276.1| succinyl-CoA synthetase alpha chain [Bacteroides sp. D2] gi|315923109|ref|ZP_07919349.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. D2] gi|156110280|gb|EDO12025.1| hypothetical protein BACOVA_02526 [Bacteroides ovatus ATCC 8483] gi|313696984|gb|EFS33819.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. D2] Length = 286 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 148/293 (50%), Positives = 212/293 (72%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+++VQG+TG+ G FH ++ Y T VVGG P KG T G +PVF Sbjct: 1 MSILIDKSTRLIVQGITGRDGLFHAKKMKEYG-THVVGGTSPGKGGTDVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A E+T AN S+I+VP A DAI+E+ +A I LIVCI EGIP LD+++ +E+ Sbjct: 56 TMYDAVEQTKANTSIIFVPARFAADAIMEAADAGIRLIVCIAEGIPTLDVIKAHQFVEQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P +GI+PG +F +G+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAMLIGPNCPGLISPGKSMVGILPGQVFLEGNVGVISRSGTLTYEIVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F +LE+F D TE+IV++GEIGG+AEE+AA+++++ KP+V Sbjct: 176 IGIGGDPVVGLHFRQLLEMFQNDPETEAIVLIGEIGGNAEEQAAEYIRNNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG++APPG+ MGHAGA+ISG G A++KI +++ AGI +A P+ I + L Sbjct: 232 AFIAGQSAPPGKQMGHAGAIISGSSGSAKEKIESLEAAGIRVAQKPSDIPKLL 284 >gi|237750567|ref|ZP_04581047.1| succinyl-CoA synthetase alpha subunit [Helicobacter bilis ATCC 43879] gi|229373657|gb|EEO24048.1| succinyl-CoA synthetase alpha subunit [Helicobacter bilis ATCC 43879] Length = 296 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 160/299 (53%), Positives = 209/299 (69%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK G+FH+EQ + Y TQ+VGG+ P KG + G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEGSFHSEQCMAY-GTQIVGGVTPNKGGSEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A S+I+VPP+ DAIIE+ I L V ITEG P D++ K +K Sbjct: 56 TVKEAVAKTGATVSMIFVPPAFVADAIIEAAAGGIKLAVVITEGAPTKDIMFAKMYAKKQ 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS--VGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPGI+T D CKIGIMPG IF+K S +G++S+SGTLTYE+ Q +GLG S Sbjct: 116 GMDMIGPNCPGIITSDECKIGIMPGYIFKKSSTNIGLISKSGTLTYESANQLVTQGLGIS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDP+ G + +L +F AD T++IVMVGEIGGS E +AA +K++ KKP Sbjct: 176 TAVGIGGDPIIGLSYKQILPMFEADPETKAIVMVGEIGGSLEIDAAALIKEQI----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +V F++G TAP G+ MGHAGA++SGGKG A +K A++ AG+ +A SPA IG ++ +LL Sbjct: 232 VVAFISGATAPKGKRMGHAGAIVSGGKGTAAEKQEALRAAGVMVAESPAVIGETMKKLL 290 >gi|116198547|ref|XP_001225085.1| hypothetical protein CHGG_07429 [Chaetomium globosum CBS 148.51] gi|88178708|gb|EAQ86176.1| hypothetical protein CHGG_07429 [Chaetomium globosum CBS 148.51] Length = 333 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 166/296 (56%), Positives = 218/296 (73%), Gaps = 6/296 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 ++ ++ +TKVL QG TGK GTFH +QAI Y T+VVGG +PKK G +PVF Sbjct: 35 QNLRINGDTKVLYQGFTGKQGTFHAQQAIDYG-TKVVGGTNPKKAGQTHLG----LPVFA 89 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 V++A + T ANA+ I+VPP A I E+I AE+PL+VCITEGIP DMVR+ + L+ + Sbjct: 90 NVSDAVKETGANATAIFVPPPLAAAGIEEAIAAEVPLVVCITEGIPQHDMVRITSMLKSQ 149 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 150 SKTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTHAGLGQSL 209 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT FID L++FL D T+ I+M+GEIGGSAEE+AA F+++ KP+ Sbjct: 210 VVGIGGDPFSGTNFIDCLKVFLEDPETDGIIMIGEIGGSAEEDAADFIRENNTANGGKPV 269 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 V F+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L + Sbjct: 270 VSFIAGISAPPGRRMGHAGAIVSGGKGGADSKIKALEAAGVIVERSPAGLGKALRD 325 >gi|238028529|ref|YP_002912760.1| succinyl-CoA synthetase subunit alpha [Burkholderia glumae BGR1] gi|237877723|gb|ACR30056.1| Succinyl-CoA synthase, alpha subunit [Burkholderia glumae BGR1] Length = 293 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 157/297 (52%), Positives = 208/297 (70%), Gaps = 12/297 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA+++K K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEATAAEWIKGNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ +GR L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGIKVTRNPSEMGRLL 289 >gi|86133486|ref|ZP_01052068.1| Succinyl-CoA synthetase, alpha subunit [Polaribacter sp. MED152] gi|85820349|gb|EAQ41496.1| Succinyl-CoA synthetase, alpha subunit [Polaribacter sp. MED152] Length = 290 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 159/297 (53%), Positives = 215/297 (72%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K++VQG TG GTFH Q I Y T VVGG+ P KG G PVF Sbjct: 1 MSVLVNKNSKIIVQGFTGSEGTFHAGQMIDYG-TNVVGGVTPGKGGQEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+ A+ S+I+VPP+ A DAI+ES +A I +I+CITEGIP DMV+VKA + Sbjct: 56 TVVEAVEKAGADTSIIFVPPAFAADAIMESADAGIKVIICITEGIPTADMVKVKAYIADK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD K+GIMPG IF+KG VGI+S+SGTLTYEA Q ++G G +TA Sbjct: 116 DTRLVGPNCPGVITPDEAKVGIMPGFIFKKGKVGIVSKSGTLTYEAADQVVKQGYGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +E+ + D+ TE+IVM+GEIGG+ E EAAQ++K + G +KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVEMLMNDDETEAIVMIGEIGGNLEAEAAQWIKAD---GNRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGA++ G A+ K+ ++E G+ + SPA+IG + +L Sbjct: 233 GFIAGQTAPAGRTMGHAGAIVGGADDTAQAKMKILEENGVHVVSSPAKIGEMVASVL 289 >gi|313682584|ref|YP_004060322.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Sulfuricurvum kujiense DSM 16994] gi|313155444|gb|ADR34122.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Sulfuricurvum kujiense DSM 16994] Length = 291 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 156/297 (52%), Positives = 208/297 (70%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K++KV+VQG TGK GTFH EQ I Y T++VGG+ P KG G PVF Sbjct: 1 MSILVNKDSKVIVQGFTGKEGTFHAEQCIAY-GTKIVGGVTPGKGGQEHLGQ----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A S+I+VPP+ DA++E+ +A I L V ITEG PV DM+ KA K Sbjct: 56 TVEEAVRSTGATVSMIFVPPAFVSDAVMEAADAGIELAVIITEGAPVKDMMYAKAYAVKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + IGPNCPGI+T D CKIGIMPG IF+KG++G++S+SGTLTYE+ Q +EG G +TA Sbjct: 116 NMMTIGPNCPGIITADECKIGIMPGFIFKKGNIGLISKSGTLTYESANQVVKEGFGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + +L +F AD T +IVM+GEIGG E +AA ++K+ KP+V Sbjct: 176 VGIGGDPIIGLSYKQLLPMFEADPETHAIVMIGEIGGDLEIQAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAP G+ MGHAGA+ISGG G A +K+ A++ AG+ + SPA IG+++ E++ Sbjct: 232 AFIAGQTAPAGKRMGHAGAIISGGSGTAAEKMAALEAAGVKVVVSPADIGKAVAEVM 288 >gi|153806392|ref|ZP_01959060.1| hypothetical protein BACCAC_00655 [Bacteroides caccae ATCC 43185] gi|149131069|gb|EDM22275.1| hypothetical protein BACCAC_00655 [Bacteroides caccae ATCC 43185] Length = 322 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 146/289 (50%), Positives = 210/289 (72%), Gaps = 9/289 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+++VQG+TG+ G FH + Y T VVGG P KG + G +PVF Sbjct: 1 MSILIDKSTRLIVQGITGRDGLFHARKMKEYG-TNVVGGTSPGKGGSDANG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA E+T AN S+I+VP A DAI+E+ +A I LIVCI EGIP LD+++ +++ Sbjct: 56 TMYEAVEQTQANTSIIFVPARFAADAIMEAADAGIQLIVCIAEGIPTLDVIKAHQFIKQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPG+++P +GI+PG +F+KG+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAILVGPNCPGLISPGKSMVGILPGQVFQKGNVGVISRSGTLTYEIVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F ++LE+F D TE+IV++GEIGG+AEE+AA+++++ KP+V Sbjct: 176 IGIGGDPVVGLHFRELLEMFQNDTETEAIVLIGEIGGNAEEQAAEYIRNHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 F+AG++AP G+ MGHAGA+ISG G A++KI A++ AGI +A P+ I Sbjct: 232 AFIAGQSAPLGKQMGHAGAIISGTSGSAKEKIEALEAAGIQVAQEPSDI 280 >gi|255536041|ref|YP_003096412.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Flavobacteriaceae bacterium 3519-10] gi|255342237|gb|ACU08350.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Flavobacteriaceae bacterium 3519-10] Length = 290 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 164/298 (55%), Positives = 217/298 (72%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG GTFH +Q I Y T V+GG+ P KG + G PVF Sbjct: 1 MSVLVNKDSKVVVQGFTGNEGTFHAQQMIEYG-TNVIGGVTPGKGGSEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+E+ E+ AN S+I+VPP+ A DAI+E+ +A I +IVCITEGIPV DMV+VKA + Sbjct: 56 TVSESVEKAGANVSIIFVPPAFAADAIMEAADAGIKVIVCITEGIPVEDMVKVKAYIADR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+T D KIGIMPG +F+KG VGI+S+SGTLTYEA Q + G G STA Sbjct: 116 ETRLIGPNCPGIITSDEAKIGIMPGFVFKKGRVGIVSKSGTLTYEAADQVVKAGYGVSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + LELF+ D T+++VM+GEIGG+ E EAA++ K+ G KP+V Sbjct: 176 IGIGGDPIIGTTTKEALELFINDPETDAVVMIGEIGGNLEAEAARWYKE---SGSTKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + A+ K+ M E GI + SPA IG ++ ++LG Sbjct: 233 GFIAGQTAPKGRTMGHAGAIVGGDEDTAQAKMAIMSENGINVVDSPAEIGATVAKVLG 290 >gi|223937438|ref|ZP_03629343.1| succinyl-CoA synthetase, alpha subunit [bacterium Ellin514] gi|223893989|gb|EEF60445.1| succinyl-CoA synthetase, alpha subunit [bacterium Ellin514] Length = 296 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 167/304 (54%), Positives = 220/304 (72%), Gaps = 15/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV TK+LVQG+TG G HT+ ++ Y +QVV G+ P KG + VP+F Sbjct: 1 MSILVTPTTKILVQGITGSFGAKHTQLSLAY-GSQVVAGVTPGKGGQLFEN---KVPIFD 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + T A S I+VPP A DAI+E+++A + L VCITEGIPV DMV+VK ++ S Sbjct: 57 TVAEAAKLTGATVSAIFVPPPFAADAILEAVDAGLDLAVCITEGIPVNDMVKVKRAMQGS 116 Query: 121 SSRLIGPNCPGILTP----DS---CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +RLIGPNCPG++TP DS C+IGI PG I +KG++G++SRSGTLTYEAV+Q + Sbjct: 117 KTRLIGPNCPGLVTPGEGKDSHGGCRIGIAPGYIHKKGNIGVVSRSGTLTYEAVWQLTCR 176 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G+GQST VGIGGDPV GT +D++++F D T I+M+GEIGGSAEEEAA+++K Sbjct: 177 GVGQSTCVGIGGDPVNGTSHLDIVKMFNDDPETHGIIMIGEIGGSAEEEAAEWIKKNC-- 234 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KKP+ GF+AG TAPPGR MGHAGA++SGGKG A KI A KEAGI IA +P+ + +L Sbjct: 235 --KKPVAGFIAGATAPPGRRMGHAGAIVSGGKGTAAAKIAAFKEAGIGIAATPSEMADTL 292 Query: 294 VELL 297 ++++ Sbjct: 293 LKMM 296 >gi|154312746|ref|XP_001555700.1| hypothetical protein BC1G_05074 [Botryotinia fuckeliana B05.10] gi|150849776|gb|EDN24969.1| hypothetical protein BC1G_05074 [Botryotinia fuckeliana B05.10] Length = 329 Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 171/294 (58%), Positives = 221/294 (75%), Gaps = 10/294 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFT 60 ++ + K+T+V+ QG TGK GTFH +QAI Y T VVGG +PKK G T+ +++PVF Sbjct: 34 NLRITKDTRVIYQGFTGKQGTFHAQQAIEY-GTTVVGGTNPKKAGQTH-----LDLPVFA 87 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TV +A + A AS I+VPP A I E+I AEIPL+VCITEGIP DMVR+ L+ + Sbjct: 88 TVEQAVKEAGATASAIFVPPPLAAAGIEEAIAAEIPLVVCITEGIPQHDMVRITDILKTQ 147 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPG++ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 148 GKTRLVGPNCPGLIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSL 207 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLKD KKP+ Sbjct: 208 VVGIGGDPFSGTNFIDCLKVFLEDEETDGIIMIGEIGGSAEEDAAEFLKD--YNTAKKPV 265 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 V F+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L Sbjct: 266 VSFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALEAAGVIVERSPALLGKTL 319 >gi|223949411|gb|ACN28789.1| unknown [Zea mays] Length = 263 Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 160/263 (60%), Positives = 201/263 (76%), Gaps = 8/263 (3%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 +VGG+ PKKG T G +PVF +VAEAK T ANA+VIYVPP A AI+E++EAE+ Sbjct: 1 MVGGVTPKKGGTEHLG----LPVFNSVAEAKAETKANATVIYVPPPFAAAAIMEAMEAEL 56 Query: 96 PLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 L VCITEGIP DMV+VKA L +S +RLIGPNCPGI+ P CKIGIMPG I + G +G Sbjct: 57 DLAVCITEGIPQHDMVKVKAALNSQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIG 116 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 I+SRSGTLTYEAVFQT+ GLGQST VGIGGDP GT F+D LE F+ D TE IV++GE Sbjct: 117 IVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFVNDPQTEGIVLIGE 176 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 IGG+AEE+AA F+++ + KP+V F+AG TAPPGR MGHAGA+++GGKG A+DKI A Sbjct: 177 IGGTAEEDAATFIQESKTQ---KPVVAFIAGLTAPPGRRMGHAGAIVAGGKGTAQDKIKA 233 Query: 275 MKEAGICIAPSPARIGRSLVELL 297 ++EAG+ + SPA+IG ++ E+ Sbjct: 234 LREAGVTVVESPAKIGSTMFEIF 256 >gi|296223417|ref|XP_002757610.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial-like [Callithrix jacchus] Length = 346 Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 181/294 (61%), Positives = 226/294 (76%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLHQGK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 225 GIGGDPFNGTDFIDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 338 >gi|189190502|ref|XP_001931590.1| succinyl-CoA ligase subunit alpha [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973196|gb|EDU40695.1| succinyl-CoA ligase subunit alpha [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 328 Score = 299 bits (765), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 170/295 (57%), Positives = 219/295 (74%), Gaps = 8/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKVL QG TGK GTFH +QAI Y T+VVGG +PKK T G +PVF + Sbjct: 33 NLRINGDTKVLFQGFTGKQGTFHAQQAIEYG-TKVVGGTNPKKAGTQHLG----LPVFKS 87 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VA+A + T A+A+ I+VPP A +I E+I AE+PLIV ITEGIP DMVR+ L+ ++ Sbjct: 88 VADAVKETQASATAIFVPPPVAAASIEEAIAAEVPLIVTITEGIPQHDMVRITDMLKSQN 147 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR++GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 148 KSRMVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 207 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA FLK+ KP+V Sbjct: 208 VGIGGDPFSGTNFIDCLKVFLKDEETDGIIMIGEIGGSAEEDAADFLKEY--NTANKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG +APPGR MGHAGA++SGGKG A KI A++ AG+ + SPA++G +L + Sbjct: 266 SFIAGISAPPGRRMGHAGAIVSGGKGDANSKITALEAAGVTVERSPAKLGSTLYD 320 >gi|109452591|ref|NP_003840.2| succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor [Homo sapiens] gi|223634731|sp|P53597|SUCA_HUMAN RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor gi|119619964|gb|EAW99558.1| succinate-CoA ligase, GDP-forming, alpha subunit [Homo sapiens] Length = 346 Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 181/294 (61%), Positives = 226/294 (76%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 225 GIGGDPFNGTDFIDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 338 >gi|189053840|dbj|BAG36098.1| unnamed protein product [Homo sapiens] Length = 333 Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 181/294 (61%), Positives = 225/294 (76%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 37 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 92 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEK 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 152 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 212 GIGGDPFNGTDFIDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G + + Sbjct: 272 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTFYK 325 >gi|12653465|gb|AAH00504.1| SUCLG1 protein [Homo sapiens] gi|48146395|emb|CAG33420.1| SUCLG1 [Homo sapiens] gi|62988720|gb|AAY24107.1| unknown [Homo sapiens] Length = 333 Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 181/294 (61%), Positives = 226/294 (76%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 37 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 92 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEK 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 152 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 212 GIGGDPFNGTDFIDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 272 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 325 >gi|255931937|ref|XP_002557525.1| Pc12g06870 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582144|emb|CAP80314.1| Pc12g06870 [Penicillium chrysogenum Wisconsin 54-1255] Length = 329 Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 170/294 (57%), Positives = 218/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+T+VL QG TGK GTFH EQAI Y T VVGG +PKK T +++ PVF Sbjct: 34 NLKINKDTRVLFQGFTGKQGTFHAEQAIAY-GTNVVGGTNPKKAGTT----HLDRPVFAN 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V++A + T A AS I+VPP A I E+I AE+ L+VCITEGIP DMVR+ L+ ++ Sbjct: 89 VSDAVKETGATASAIFVPPPLAAAGIEEAIAAEMGLVVCITEGIPQHDMVRITDILKTQN 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 149 KTRLIGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+M+GEIGGSAEE+AA+F K A KP V Sbjct: 209 VGIGGDPFSGTNFIDCLKVFLEDPETDGIIMIGEIGGSAEEDAAEFFK--ANNIHNKPAV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AG +APPGR MGHAGA++SGGKGGA+ KI+A+ +AG+ + SPA +G++L+ Sbjct: 267 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALTDAGVIVERSPASLGKTLL 320 >gi|88803193|ref|ZP_01118719.1| succinyl-CoA synthase, alpha subunit [Polaribacter irgensii 23-P] gi|88780759|gb|EAR11938.1| succinyl-CoA synthase, alpha subunit [Polaribacter irgensii 23-P] Length = 292 Score = 298 bits (764), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 160/298 (53%), Positives = 216/298 (72%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K++VQG TG GTFH Q I Y T VVGG+ P KG G PVF Sbjct: 1 MSVLVNKNSKIIVQGFTGSEGTFHAGQMIDY-GTNVVGGVTPGKGGQEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV E+ E A+ S+I+VPP+ A DAI+E+ +A I +I+CITEGIP DMV+VKA ++ Sbjct: 56 TVLESVEEVGADTSIIFVPPAFAADAIMEAADAGIKVIICITEGIPTADMVKVKAYIDTR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TPD K+GIMPG IF+KG+VGI+S+SGTLTYEA Q ++G G +TA Sbjct: 116 DCRLIGPNCPGVITPDEAKVGIMPGFIFKKGNVGIVSKSGTLTYEAADQVVKQGYGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D+ TE+IVM+GEIGG+ E EAAQ++K + G +KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDDETEAIVMIGEIGGNLEAEAAQWIKAD---GNRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G A+ K+ + E G+ + SPA+IG + ++LG Sbjct: 233 GFIAGQTAPAGRTMGHAGAIVGGADDTAQAKMKILAECGVHVVSSPAKIGEMVAKVLG 290 >gi|315022910|gb|EFT35933.1| succinyl-CoA synthetase, alpha subunit [Riemerella anatipestifer RA-YM] gi|325336452|gb|ADZ12726.1| Succinyl-CoA synthetase, alpha subunit [Riemerella anatipestifer RA-GD] Length = 290 Score = 298 bits (764), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 165/298 (55%), Positives = 214/298 (71%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+++V+VQG TG GTFH Q I Y T VVGG+ P KG T G PVF Sbjct: 1 MSVLVNKDSRVIVQGFTGNEGTFHAGQMIDY-GTNVVGGVTPGKGGTEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A E+ AN S+I+VPP+ A DAI+E+ +A I +IVCITEGIPV DM +VK + Sbjct: 56 TVADAVEKAGANVSIIFVPPAFAADAIMEAADAGIKVIVCITEGIPVADMTKVKNYIADK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+T D KIGIMPG +F+KG VGI+S+SGTLTYEA Q + G G STA Sbjct: 116 DCRLIGPNCPGIITSDEAKIGIMPGFVFKKGKVGIVSKSGTLTYEAADQVVRAGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + LE+F+ D TE++VM+GEIGG+ E EAA++ K G KKP+V Sbjct: 176 IGIGGDPIIGTTTKEALEMFINDPETEAVVMIGEIGGNLEAEAAKWYK---ASGSKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + A+ K+ M+E GI + SPA IG ++ ++LG Sbjct: 233 GFIAGQTAPKGRTMGHAGAIVGGAEDTAQAKMAIMRENGINVVDSPADIGVTIAKVLG 290 >gi|9409794|gb|AAD17940.2| succinyl-CoA synthetase alpha subunit [Homo sapiens] Length = 333 Score = 298 bits (764), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 181/294 (61%), Positives = 226/294 (76%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 37 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTLPGKGGQTHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 92 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEK 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 152 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 212 GIGGDPFNGTDFIDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 272 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 325 >gi|302695055|ref|XP_003037206.1| hypothetical protein SCHCODRAFT_13366 [Schizophyllum commune H4-8] gi|300110903|gb|EFJ02304.1| hypothetical protein SCHCODRAFT_13366 [Schizophyllum commune H4-8] Length = 324 Score = 298 bits (764), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 165/298 (55%), Positives = 215/298 (72%), Gaps = 7/298 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + K+TKVLVQG+TGK TFH +A+ Y T +VGG+ PKK G +PVF + Sbjct: 26 NLRIHKDTKVLVQGVTGKTATFHAAEALKY-GTNMVGGVSPKKAGQTHLG----LPVFGS 80 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA T +A+V+YVPP A DAII++IE EI LIVCITEGIP D +RV L+ +S Sbjct: 81 VKEAVRETHPDATVLYVPPPSAADAIIDAIENEIGLIVCITEGIPQQDEIRVANALKNQS 140 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P CK+GI PG I G +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 141 KSRLVGPNCPGIINPLGCKMGIQPGHIHTPGKIGIVSRSGTLTYEAVAQTTDVGLGQTLC 200 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK-RGRKKPI 239 VGIGGDP GT +DV+++FL D TE IV++GEIGGS EE+AA++L+ K R KP+ Sbjct: 201 VGIGGDPFPGTTHLDVVKVFLEDPNTEGIVIIGEIGGSMEEDAAEYLEKYNKTRAVPKPV 260 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGR MGHAGA+I+GGKG A DK+ A++ AG + SPA+IG +++ + Sbjct: 261 VGFIAGRTAPPGRRMGHAGAIIAGGKGAASDKVKALEAAGAIVTDSPAKIGSEMLKAM 318 >gi|158255600|dbj|BAF83771.1| unnamed protein product [Homo sapiens] Length = 333 Score = 298 bits (764), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 181/294 (61%), Positives = 226/294 (76%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 37 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 92 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEK 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 152 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 212 GIGGDPFNGTDFIDCLEIFLDDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 272 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 325 >gi|313672319|ref|YP_004050430.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Calditerrivibrio nitroreducens DSM 19672] gi|312939075|gb|ADR18267.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Calditerrivibrio nitroreducens DSM 19672] Length = 290 Score = 298 bits (764), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 158/298 (53%), Positives = 213/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K TKV+VQG TGK G+FH +Q + Y T +VGG+ P KG T G PVF Sbjct: 1 MSILVNKYTKVIVQGFTGKEGSFHAQQCMEY-GTNIVGGVTPGKGGTDHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A S+I+VPP+ GDAI+E+ +A I L V ITEG PV D++ KA K Sbjct: 56 TVEEAVKSTGAEVSIIFVPPAFLGDAIMEAADAGIKLAVAITEGAPVRDIMVAKAYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPGI+T + CKIGIMPG IF+KG+VG++S+SGTLTYEA Q + G G +TA Sbjct: 116 GMMMIGPNCPGIITAEECKIGIMPGFIFKKGNVGLISKSGTLTYEASNQIVKAGYGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L +F AD T++IVM+GEIGG+ E EAA+ +K++ KP+V Sbjct: 176 VGIGGDPIIGLSYKELLPMFEADPETKAIVMIGEIGGTLEIEAAELIKEKI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG+TAP G+ MGHAGA+I+GGKG A++K++A+ AG + SPA IG ++ ++LG Sbjct: 232 AFIAGQTAPKGKRMGHAGAIIAGGKGTAKEKMDALTAAGAHVVVSPADIGTTVAKVLG 289 >gi|313206103|ref|YP_004045280.1| succinyl-CoA synthetase, alpha subunit [Riemerella anatipestifer DSM 15868] gi|312445419|gb|ADQ81774.1| succinyl-CoA synthetase, alpha subunit [Riemerella anatipestifer DSM 15868] Length = 290 Score = 298 bits (764), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 165/298 (55%), Positives = 214/298 (71%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+++V+VQG TG GTFH Q I Y T VVGG+ P KG T G PVF Sbjct: 1 MSVLVNKDSRVIVQGFTGNEGTFHAGQMIDY-GTNVVGGVTPGKGGTEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A E+ AN S+I+VPP+ A DAI+E+ +A I +IVCITEGIPV DM +VK + Sbjct: 56 TVADAVEKADANVSIIFVPPAFAADAIMEAADAGIKVIVCITEGIPVADMTKVKNYIADK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+T D KIGIMPG +F+KG VGI+S+SGTLTYEA Q + G G STA Sbjct: 116 DCRLIGPNCPGIITSDEAKIGIMPGFVFKKGKVGIVSKSGTLTYEAADQVVRAGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + LE+F+ D TE++VM+GEIGG+ E EAA++ K G KKP+V Sbjct: 176 IGIGGDPIIGTTTKEALEMFINDPETEAVVMIGEIGGNLEAEAAKWYK---ASGSKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + A+ K+ M+E GI + SPA IG ++ ++LG Sbjct: 233 GFIAGQTAPKGRTMGHAGAIVGGAEDTAQAKMAIMRENGINVVDSPADIGVTIAKVLG 290 >gi|221633776|ref|YP_002523002.1| succinyl-CoA synthetase subunit alpha [Thermomicrobium roseum DSM 5159] gi|221157054|gb|ACM06181.1| succinyl-CoA synthetase alpha chain [Thermomicrobium roseum DSM 5159] Length = 291 Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 164/299 (54%), Positives = 215/299 (71%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVD++T++LVQG+TGK G+FHT Q I Y T+VV G+ P G G VPVF Sbjct: 1 MAILVDESTRLLVQGITGKEGSFHTGQMIEY-GTRVVAGVTPGAGGRVVHG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T N S I VP A DAI+E+ +A IPLIVCITEGIPVL+M+RV + + Sbjct: 56 TVTDAVAATQPNVSFIAVPAPFAPDAILEAADAGIPLIVCITEGIPVLEMLRVYHAVRQR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG+++P K+GIMPG I G VGI+SRSGTLTYE V+ ++ G+GQS+A Sbjct: 116 GVRLIGPNCPGLISPGKAKVGIMPGFIHTPGPVGIVSRSGTLTYEVVWALTRAGIGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F+DVLELF D T +IV++GEIGG+ EE AA +++++ KP+V Sbjct: 176 VGIGGDPIIGTSFVDVLELFENDPETRAIVLIGEIGGADEEAAAAYIREQV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+ISGG+G A +KI A++ AG+ +A PA I + E+L + Sbjct: 232 GFIAGRTAPPGRRMGHAGAIISGGRGTAAEKIAALEAAGVHVAERPAEIADLMREILAN 290 >gi|300776448|ref|ZP_07086306.1| succinate--CoA ligase (ADP-forming) [Chryseobacterium gleum ATCC 35910] gi|300501958|gb|EFK33098.1| succinate--CoA ligase (ADP-forming) [Chryseobacterium gleum ATCC 35910] Length = 290 Score = 298 bits (763), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 167/298 (56%), Positives = 214/298 (71%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K++KV+VQG TG GTFH Q I Y T VVGG+ P KG + G PVF Sbjct: 1 MSILVNKDSKVIVQGFTGNEGTFHAGQMIEY-GTNVVGGVTPGKGGSEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A E+ AN S+I+VPP+ A DAI+E+ EA I +IVCITEGIPV DMV+VK+ + Sbjct: 56 TVADAVEKAGANVSIIFVPPAFAADAIMEAAEAGIKVIVCITEGIPVADMVKVKSYIADR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+T + KIGIMPG +F+KG VGI+S+SGTLTYEA Q + G G STA Sbjct: 116 DCRLIGPNCPGIITSEEAKIGIMPGFVFKKGKVGIVSKSGTLTYEAADQVVRAGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + LELF+ D TE++VM+GEIGG E EAA++ K G KP+V Sbjct: 176 IGIGGDPIIGTTTREALELFINDPETEAVVMIGEIGGGLEAEAARWYK---ASGSTKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + A+ K+ M+E GI + SPA IG ++ ++LG Sbjct: 233 GFIAGQTAPKGRTMGHAGAIVGGAEDTAQAKMEIMRENGINVVDSPADIGATVAKILG 290 >gi|284038109|ref|YP_003388039.1| succinyl-CoA synthetase, subunit alpha [Spirosoma linguale DSM 74] gi|283817402|gb|ADB39240.1| succinyl-CoA synthetase, alpha subunit [Spirosoma linguale DSM 74] Length = 291 Score = 298 bits (763), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 162/298 (54%), Positives = 216/298 (72%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG G+FH +Q I Y T VVGG+ P KG +++ PVF Sbjct: 1 MSVLVNKDSKVIVQGFTGSEGSFHAQQMIEY-GTNVVGGVTPGKGGQT----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ++ AN S+I+VPP+ A DAI+E+ EA I +I+CITEGIP DMV VK L Sbjct: 56 TVQQAVDQAGANVSIIFVPPAFAADAIMEAAEAGIKVIICITEGIPTEDMVAVKNYLSDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++T D CK+GIMPG IF KG++GI+S+SGTLTYEAV Q ++ GLGQSTA Sbjct: 116 DVRLIGPNCPGVMTADECKVGIMPGFIFTKGTIGIVSKSGTLTYEAVDQLTKAGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE+IVM+GEIGG E EAA+++K + G +KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPDTEAIVMIGEIGGGMEAEAARWIKAD---GNRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GR MGHAGA++ G A K+ M+E GI + SPA IG ++++ LG Sbjct: 233 GFIAGQTAPKGRRMGHAGAIVGGADDTAAAKMAIMRECGIHVVESPALIGDTMLKALG 290 >gi|217969349|ref|YP_002354583.1| succinyl-CoA synthetase subunit alpha [Thauera sp. MZ1T] gi|217506676|gb|ACK53687.1| succinyl-CoA synthetase, alpha subunit [Thauera sp. MZ1T] Length = 297 Score = 298 bits (763), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 157/305 (51%), Positives = 215/305 (70%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHTE+ I Y + V G++PKK ++VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTEKCIEYANGKNCFVAGVNPKKAGEKI----LDVPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +AK+ T A SVIYVPP+GA AI E+ EA++ L +CITEGIPV DM+ V+ R++ Sbjct: 57 YGSVKDAKDATGATVSVIYVPPAGAAAAIWEACEADLDLAICITEGIPVRDMLVVRNRMK 116 Query: 119 KS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ Sbjct: 117 QKVAAGGKETLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV+ +F D T++++M+GEIGG E EAAQ+ K Sbjct: 177 IGLGQSSAVGIGGDPINGLKHIDVMRMFNDDPDTDAVIMIGEIGGPDEAEAAQW----CK 232 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G + +P+ +G+ Sbjct: 233 ANMKKPIVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFKVTRNPSEMGKL 292 Query: 293 LVELL 297 L +L Sbjct: 293 LKAML 297 >gi|85860261|ref|YP_462463.1| succinyl-CoA synthetase subunit alpha [Syntrophus aciditrophicus SB] gi|85723352|gb|ABC78295.1| succinyl-CoA synthetase alpha chain [Syntrophus aciditrophicus SB] Length = 291 Score = 298 bits (763), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 151/290 (52%), Positives = 207/290 (71%), Gaps = 9/290 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+++NT+V VQG+TG G FH + I Y T+VV G+ P KG G VPVF Sbjct: 1 MSILINENTRVAVQGITGTEGAFHARRMIEY-GTKVVAGVTPGKGGLVHDG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 ++ EA + TA + SVI+VP A DA++E+ EA I L+VC EGIPVLD V + LE+ Sbjct: 56 SMREAAQETAPDVSVIFVPAPYAADAVMEATEAGIKLVVCPAEGIPVLDTVLARRYLEER 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPN PGI++P CK+G+M G I R+GSVG++SRSGTLTYEAV Q S++G+GQST Sbjct: 116 KVMLIGPNTPGIISPGKCKVGLMAGYIHRQGSVGVVSRSGTLTYEAVHQLSRKGIGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+D+L+L+ D T+++V++GEIGGS EE+AA+F + KP++ Sbjct: 176 LGIGGDPVVGLSFVDILQLYEEDPGTKAVVLIGEIGGSMEEKAAEFFRTTM----TKPLI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 ++AG TAPP R MGHAGA+IS +GGA++KI A+++AG+ + +PA IG Sbjct: 232 AYIAGVTAPPERRMGHAGAIISRNRGGAQEKIRALEDAGVIVVRNPAEIG 281 >gi|114578453|ref|XP_525798.2| PREDICTED: similar to succinate-CoA ligase, GDP-forming, alpha subunit isoform 2 [Pan troglodytes] Length = 371 Score = 298 bits (762), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 180/295 (61%), Positives = 226/295 (76%), Gaps = 6/295 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 225 GIGGDPFNGTDFTDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ ++ Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKV 339 >gi|68075515|ref|XP_679676.1| succinyl-CoA synthetase alpha subunit [Plasmodium berghei strain ANKA] gi|56500478|emb|CAI04443.1| succinyl-CoA synthetase alpha subunit, putative [Plasmodium berghei] Length = 294 Score = 298 bits (762), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 159/288 (55%), Positives = 207/288 (71%), Gaps = 9/288 (3%) Query: 21 GTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--GNVNVPVFTTVAEAKERTAANASVIYV 78 G+FHT +A+ Y T++VGG++P K + WT +PVF +V EAKE+T ASVIYV Sbjct: 7 GSFHTTEALKY-GTKMVGGVNPSKKGSTWTSIDNKYTLPVFGSVFEAKEKTNCYASVIYV 65 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS-SRLIGPNCPGILTPDS 137 P A +AIIESIE+EIPLIVCITEGI DM+ VKA L S SRLIGPNCPGI+ P Sbjct: 66 PHQHAKNAIIESIESEIPLIVCITEGICQHDMLEVKACLNMSKKSRLIGPNCPGIIKPGE 125 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 KIGI+P I +KG VGI+SRSGTLTYE V QT++ GLGQST +GIGGDP GT FID L Sbjct: 126 SKIGILPSHIHKKGCVGIVSRSGTLTYEGVNQTTKVGLGQSTCIGIGGDPFHGTSFIDCL 185 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFL-----KDEAKRGRKKPIVGFVAGKTAPPGR 252 +LFL D+ T+ I+++GEIGG+AEE+ A++L D K+ +KK I F+AG+ APPG+ Sbjct: 186 KLFLEDDETKCILLIGEIGGNAEEQVAEWLIENNVDDPEKKKKKKNIFAFIAGRCAPPGK 245 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 MGHAGA+ISGGKG A+ KI A++ AG+ + +P +IG + ++ + Sbjct: 246 RMGHAGALISGGKGTADGKIEALRNAGVHVVINPTKIGEEIYNVMKDI 293 >gi|330918877|ref|XP_003298377.1| hypothetical protein PTT_09097 [Pyrenophora teres f. teres 0-1] gi|311328415|gb|EFQ93517.1| hypothetical protein PTT_09097 [Pyrenophora teres f. teres 0-1] Length = 328 Score = 298 bits (762), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 169/295 (57%), Positives = 219/295 (74%), Gaps = 8/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKVL QG TGK GTFH +QAI Y T+VVGG +PKK T G +PVF + Sbjct: 33 NLRINGDTKVLFQGFTGKQGTFHAQQAIEYG-TKVVGGTNPKKAGTQHLG----LPVFKS 87 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VA+A + T A+A+ I+VPP A +I E+I AE+PLIV ITEGIP DMVR+ L+ ++ Sbjct: 88 VADAIKETQASATAIFVPPPVAAASIEEAIAAEVPLIVTITEGIPQHDMVRITDMLKSQN 147 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR++GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 148 KSRMVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 207 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D+ T+ I+M+GEIGGSAEE+AA FLK+ KP+V Sbjct: 208 VGIGGDPFSGTNFIDCLKVFLEDQETDGIIMIGEIGGSAEEDAADFLKEY--NTANKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG +APPGR MGHAGA++SGGKG A KI A++ AG+ + SPA++G +L + Sbjct: 266 SFIAGISAPPGRRMGHAGAIVSGGKGDANSKITALEAAGVTVERSPAKLGSTLYD 320 >gi|293370302|ref|ZP_06616859.1| succinyl-CoA synthetase subunit alpha [Bacteroides ovatus SD CMC 3f] gi|299145916|ref|ZP_07038984.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Bacteroides sp. 3_1_23] gi|292634597|gb|EFF53129.1| succinyl-CoA synthetase subunit alpha [Bacteroides ovatus SD CMC 3f] gi|298516407|gb|EFI40288.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Bacteroides sp. 3_1_23] Length = 286 Score = 298 bits (762), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 147/293 (50%), Positives = 211/293 (72%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+++VQG+TG+ G FH ++ Y T VVGG P KG T G +PVF Sbjct: 1 MSILIDKSTRLIVQGITGRDGLFHAKKMKEYG-TNVVGGTSPGKGGTDVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A E+T AN S+I+VP A DAI+E+ +A I +IVCI EGIP LD+++ E+ Sbjct: 56 TMYDAVEQTKANTSIIFVPARFAADAIMEAADAGIRIIVCIAEGIPTLDVIKAHQFAEQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P +GI+PG +F +G+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAMLIGPNCPGLISPGKSMVGILPGQVFLEGNVGVISRSGTLTYEIVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F +LE+F D TE+IV++GEIGG+AEE+AA+++++ KP+V Sbjct: 176 IGIGGDPVVGLHFRQLLEMFQNDPETEAIVLIGEIGGNAEEQAAEYIRNNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG++APPG+ MGHAGA+ISG G A++KI +++ AGI +A P+ I + L Sbjct: 232 AFIAGQSAPPGKQMGHAGAIISGSSGSAKEKIKSLEAAGIRVAQEPSDIPKLL 284 >gi|149244140|ref|XP_001526613.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] gi|146449007|gb|EDK43263.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] Length = 323 Score = 298 bits (762), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 175/297 (58%), Positives = 223/297 (75%), Gaps = 10/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFT 60 ++ ++K+TKV+ QG TG+ GTFH EQAI Y T VVGGI+PKK G T+ ++ PVF Sbjct: 24 NLKINKDTKVIFQGFTGRQGTFHAEQAIAYG-TDVVGGINPKKAGQTH-----LDRPVFG 77 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TVAEA + A A+ I+VPP A AI E+I AEIPL V ITEGIP DMVRV L+ + Sbjct: 78 TVAEAMKEAGATATGIFVPPPLAAGAIEEAIAAEIPLAVAITEGIPQKDMVRVAQILKTQ 137 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S +RL+GPNCPGI++PD CKIGIMP SIF++G VG++S+SGTLTYEAV QT+Q GLGQS Sbjct: 138 SKTRLVGPNCPGIISPDQCKIGIMPQSIFKRGKVGVVSKSGTLTYEAVAQTTQVGLGQSL 197 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE--AKRGRKK 237 +G+GGDP GT FID L LFL D TE I+++GEIGGSAEEEA++FLK + K Sbjct: 198 VIGMGGDPFPGTNFIDSLTLFLNDPETEGIILIGEIGGSAEEEASEFLKQHNLTRPEGAK 257 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 P+VGF+AG +APPGR MGHAGA+++GGKG A+ KI A++ AG+ + SPAR+G SL+ Sbjct: 258 PVVGFIAGVSAPPGRRMGHAGAIVAGGKGDAKSKIAALEAAGVVVEKSPARLGNSLL 314 >gi|298484466|ref|ZP_07002620.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Bacteroides sp. D22] gi|298269375|gb|EFI10982.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Bacteroides sp. D22] Length = 286 Score = 298 bits (762), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 147/293 (50%), Positives = 212/293 (72%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+++VQG+TG+ G FH ++ Y T+VVGG P KG T G +PVF Sbjct: 1 MSILIDKSTRLIVQGITGRDGLFHAKKMKEYG-TKVVGGTSPGKGGTDVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A E+T AN S+I+VP A DAI+E+ +A I +IVCI EGIP LD+++ E+ Sbjct: 56 TMYDAVEQTKANTSIIFVPARFAADAIMEAADAGIRIIVCIAEGIPTLDVIKAHRFAEQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P +GI+PG +F +G+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAMLIGPNCPGLISPGKSMVGILPGQVFLEGNVGVISRSGTLTYEIVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F +LE+F D TE+IV++GEIGG+AEE+AA+++++ KP+V Sbjct: 176 IGIGGDPVVGLHFRQLLEMFQNDPETEAIVLIGEIGGNAEEQAAEYIRNNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG++APPG+ MGHAGA+ISG G A++KI +++ AGI +A P+ I + L Sbjct: 232 AFIAGQSAPPGKQMGHAGAIISGSSGSAKEKIESLEAAGIRVAQEPSDIPKLL 284 >gi|237713288|ref|ZP_04543769.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. D1] gi|262406573|ref|ZP_06083122.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 2_1_22] gi|294647280|ref|ZP_06724875.1| succinyl-CoA synthetase subunit alpha [Bacteroides ovatus SD CC 2a] gi|294808525|ref|ZP_06767273.1| succinyl-CoA synthetase subunit alpha [Bacteroides xylanisolvens SD CC 1b] gi|229446755|gb|EEO52546.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. D1] gi|262355276|gb|EEZ04367.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 2_1_22] gi|292637356|gb|EFF55779.1| succinyl-CoA synthetase subunit alpha [Bacteroides ovatus SD CC 2a] gi|294444258|gb|EFG12977.1| succinyl-CoA synthetase subunit alpha [Bacteroides xylanisolvens SD CC 1b] Length = 286 Score = 298 bits (762), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 147/293 (50%), Positives = 212/293 (72%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+++VQG+TG+ G FH ++ Y T+VVGG P KG T G +PVF Sbjct: 1 MSILIDKSTRLIVQGITGRDGLFHAKKMKEYG-TKVVGGTSPGKGGTDVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A E+T AN S+I+VP A DAI+E+ +A I +IVCI EGIP LD+++ E+ Sbjct: 56 TMYDAVEQTKANTSIIFVPARFAADAIMEAADAGIRVIVCIAEGIPTLDVIKAHQFAEQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P +GI+PG +F +G+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAMLIGPNCPGLISPGKSMVGILPGQVFLEGNVGVISRSGTLTYEIVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F +LE+F D TE+IV++GEIGG+AEE+AA+++++ KP+V Sbjct: 176 IGIGGDPVVGLHFRQLLEMFQNDPETEAIVLIGEIGGNAEEQAAEYIRNNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG++APPG+ MGHAGA+ISG G A++KI +++ AGI +A P+ I + L Sbjct: 232 AFIAGQSAPPGKQMGHAGAIISGSSGSAKEKIESLEAAGIRVAQEPSDIPKLL 284 >gi|294339388|emb|CAZ87744.1| Succinyl-CoA ligase [ADP-forming] subunit alpha (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) [Thiomonas sp. 3As] Length = 298 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 155/305 (50%), Positives = 214/305 (70%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 M+IL++++TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MAILINQDTKVITQGITGKTGQFHTRMCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TVA+AK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ R++ Sbjct: 57 YGTVADAKAATGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVKDMLLVRNRMK 116 Query: 119 KS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TPD KIGIMPG I RKG +GI+SRSGTLTYEAV Q ++ Sbjct: 117 DKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGIVSRSGTLTYEAVAQVTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + ID++ F D T++++M+GEIGGS E EAA++ K Sbjct: 177 LGLGQSSAVGIGGDPINGLKHIDIMRAFNDDPDTDAVIMIGEIGGSDEAEAARWCKAHM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + +P+ +G+ Sbjct: 236 ---KKPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFTVTRNPSEMGKL 292 Query: 293 LVELL 297 L ++L Sbjct: 293 LKQVL 297 >gi|9955021|pdb|1EUD|A Chain A, Crystal Structure Of Phosphorylated Pig Heart, Gtp-Specific Succinyl-Coa Synthetase Length = 311 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 172/295 (58%), Positives = 217/295 (73%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 + VDKNTKV+ QG TGK GTFH++QA+ Y V ++ +PVF T Sbjct: 14 HLYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVG-----GTTPGKGGKTHLGLPVFNT 68 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A ASVIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL + Sbjct: 69 VKEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQG 128 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 129 KTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 188 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 189 VGIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVV 248 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MG AGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 249 SFIAGLTAPPGRRMGXAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYK 303 >gi|156052230|ref|XP_001592076.1| hypothetical protein SS1G_07524 [Sclerotinia sclerotiorum 1980] gi|154705300|gb|EDO05039.1| hypothetical protein SS1G_07524 [Sclerotinia sclerotiorum 1980 UF-70] Length = 329 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 170/294 (57%), Positives = 221/294 (75%), Gaps = 10/294 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFT 60 ++ + K+T+V+ QG TGK GTFH +QAI Y T VVGG +PKK G T+ +++PVF+ Sbjct: 34 NLRITKDTRVIYQGFTGKQGTFHAQQAIEY-GTTVVGGTNPKKAGQTH-----LDLPVFS 87 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 V +A + A AS I+VPP A I E+I AEIPL+VCITEGIP DMVR+ L+ + Sbjct: 88 NVEQAVKEAGATASAIFVPPPLAAAGIEEAIAAEIPLVVCITEGIPQHDMVRITDILKTQ 147 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPG++ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 148 GKTRLVGPNCPGLIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSL 207 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLKD KKP+ Sbjct: 208 VVGIGGDPFSGTNFIDCLKVFLEDEETDGIIMIGEIGGSAEEDAAEFLKD--YNTSKKPV 265 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 V F+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L Sbjct: 266 VSFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALEAAGVIVERSPALLGKTL 319 >gi|90109554|pdb|2FP4|A Chain A, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa Synthetase In Complex With Gtp gi|90109574|pdb|2FPI|A Chain A, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa Synthetase From Polyethylene Glycol gi|90109582|pdb|2FPP|A Chain A, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa Synthetase From Polyethylene Glycol With Chloride Ions Length = 305 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 172/295 (58%), Positives = 217/295 (73%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 + VDKNTKV+ QG TGK GTFH++QA+ Y V ++ +PVF T Sbjct: 8 HLYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVG-----GTTPGKGGKTHLGLPVFNT 62 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A ASVIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL + Sbjct: 63 VKEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQG 122 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 123 KTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 182 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 183 VGIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVV 242 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MG AGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 243 SFIAGLTAPPGRRMGXAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYK 297 >gi|114578451|ref|XP_001164971.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial isoform 1 [Pan troglodytes] Length = 346 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 180/294 (61%), Positives = 225/294 (76%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 225 GIGGDPFNGTDFTDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 338 >gi|78045537|ref|NP_001030254.1| succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor [Bos taurus] gi|223634714|sp|Q58DR8|SUCA_BOVIN RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor gi|61553261|gb|AAX46376.1| succinate-CoA ligase, GDP-forming, alpha subunit [Bos taurus] Length = 346 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 177/294 (60%), Positives = 224/294 (76%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VD+NTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 LYVDRNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGKTHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAE+ L+VCITEGIP DMVRVK +L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAVAAIDEAIEAEVSLVVCITEGIPQQDMVRVKHKLLRQGK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RL+GPNCPG++ P CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLVGPNCPGVINPGECKIGIMPGHIHKKGRVGIVSRSGTLTYEAVHQTTQVGLGQSLCV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 225 GIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKAKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGTTMYK 338 >gi|258592193|emb|CBE68502.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [NC10 bacterium 'Dutch sediment'] Length = 289 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 170/301 (56%), Positives = 222/301 (73%), Gaps = 15/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ---TQVVGGIHPKKGSTYWTGGNVNVP 57 MSILVD+ T+V+VQG+TGK GTFH L C+ T+VV G+ P KG G +P Sbjct: 1 MSILVDRQTRVVVQGITGKEGTFHA----LACREYGTRVVAGVTPGKGGISHEG----IP 52 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 VF TV EA E+ AN ++I+VP + A DAI+E+I+A IPL+VCITEGIP+LDMVRV L Sbjct: 53 VFDTVREAVEKEDANTALIFVPAAFAADAILEAIDAAIPLVVCITEGIPILDMVRVARIL 112 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 S +RL+GPNCPGI++PD K+GIMPG I R G VG++SRSGTLTYEAV Q ++ GLGQ Sbjct: 113 HGSDTRLVGPNCPGIISPDQAKVGIMPGRIHRPGRVGVISRSGTLTYEAVNQLTRLGLGQ 172 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 ST +GIGGDP+ GT F+D L LF D ATE+I+M+GEIGG+AEEEAA F+ +R K Sbjct: 173 STCIGIGGDPIIGTTFVDCLALFENDGATEAILMIGEIGGTAEEEAAAFV----ERHVTK 228 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P++ +VAG APP R MGHAGA+ISGG+G A +KI+A++ A I + +PA IG ++ +++ Sbjct: 229 PVIAYVAGLAAPPERRMGHAGAIISGGRGTATEKISALRRADIAVVHNPADIGAAVKKVI 288 Query: 298 G 298 G Sbjct: 289 G 289 >gi|160896317|ref|YP_001561899.1| succinyl-CoA synthetase subunit alpha [Delftia acidovorans SPH-1] gi|160361901|gb|ABX33514.1| succinyl-CoA synthetase, alpha subunit [Delftia acidovorans SPH-1] Length = 297 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 156/305 (51%), Positives = 213/305 (69%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+TKV+ QG+TGK G FHTE+ I Y + V G++PKK +VP+ Sbjct: 1 MSIYINKDTKVITQGITGKTGQFHTEKCIEYANGKNCFVAGVNPKKAGEKI----FDVPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EA + T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ ++ Sbjct: 57 YASVKEAAQGTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMR 116 Query: 119 KSSSR------LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKRTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+GQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAA++ KD Sbjct: 177 LGIGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAARWCKDNM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G I +P+ +GR Sbjct: 236 ---KKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFVITRNPSEMGRL 292 Query: 293 LVELL 297 L L+ Sbjct: 293 LKGLI 297 >gi|326335682|ref|ZP_08201868.1| succinyl-CoA synthetase subunit alpha [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692111|gb|EGD34064.1| succinyl-CoA synthetase subunit alpha [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 347 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 162/297 (54%), Positives = 213/297 (71%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K+LVQG TG GTFH EQ I Y T VVGG+ P KG G PVF Sbjct: 57 MSVLVNKNSKILVQGFTGSEGTFHAEQMIQYG-TNVVGGVTPNKGGQTHLGK----PVFN 111 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V +A + A+ S+I+VPP+ A DAI+E+ EA I +I+ ITEGIPV DMV+V A ++ Sbjct: 112 SVKDAVTKVGADTSIIFVPPAFAADAIMEAAEAGIKVIITITEGIPVADMVKVAAYIKDK 171 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP+ K+GIMPG +F+KG VGI+S+SGTLTYEA Q ++GLG STA Sbjct: 172 DCRLIGPNCPGVITPEEAKVGIMPGFVFKKGEVGIVSKSGTLTYEAADQVVRQGLGISTA 231 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +ELF+ D TE IVM+GEIGG E EAA+++K+ G +KP+V Sbjct: 232 IGIGGDPIIGTTTKEAIELFMNDPETEIIVMIGEIGGQLEVEAARWIKE---TGNRKPVV 288 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGA++ G + AE K M+E GI + SPA+IG + E+ Sbjct: 289 GFIAGETAPKGRTMGHAGAIVGGSEDTAEAKKRIMRECGIHVVDSPAKIGEKVKEVF 345 >gi|21673108|ref|NP_661173.1| succinyl-CoA synthetase, alpha subunit [Chlorobium tepidum TLS] gi|21646181|gb|AAM71515.1| succinyl-CoA synthetase, alpha subunit [Chlorobium tepidum TLS] Length = 300 Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 166/303 (54%), Positives = 227/303 (74%), Gaps = 10/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T+++VQG+TG GTFHT Q IL T VV G+ P KG + G + Sbjct: 1 MSVLVNKDTRLVVQGITGGEGTFHTSQ-ILEYGTNVVAGVTPGKGGILYNGNEKDQFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV EA ++ ANA+VI+VP A DAI+E+ A + +I+CITEGIPV DM++ + Sbjct: 60 VPVFDTVQEAVDKAEANATVIFVPAPFAADAIMEAAAAGLKVIICITEGIPVNDMMKAYS 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 ++ + L+GPNCPG++TP K+GIMPG I +KG++G++SRSGTLTYEAV Q ++ GL Sbjct: 120 YVQAKGAVLVGPNCPGVITPGEAKVGIMPGFIHKKGTIGVVSRSGTLTYEAVHQLTEVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT F+D ++LF D+ TE +VM+GEIGGSAEEEAA+++ K+ Sbjct: 180 GQSTCIGIGGDPIIGTRFLDAVKLFAKDDETEGLVMIGEIGGSAEEEAAEYI----KKYF 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG AE+KI AM+ AGI + +PA IG ++++ Sbjct: 236 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAEEKIKAMEAAGIKVVENPADIGEAMLK 295 Query: 296 LLG 298 LG Sbjct: 296 ALG 298 >gi|221069775|ref|ZP_03545880.1| succinyl-CoA synthetase, alpha subunit [Comamonas testosteroni KF-1] gi|220714798|gb|EED70166.1| succinyl-CoA synthetase, alpha subunit [Comamonas testosteroni KF-1] Length = 299 Score = 295 bits (756), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 157/305 (51%), Positives = 211/305 (69%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+TKV+ QG+TGK G FHTE+ Y + V G++PKK ++P+ Sbjct: 1 MSIFINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGEKI----FDIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V +A + T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ +++ Sbjct: 57 FGSVKDAAKETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMK 116 Query: 119 KS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TPD KIGIMPG I +KG VG++SRSGTLTYEAV Q S+ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRVGVVSRSGTLTYEAVAQLSE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+GQS+AVGIGGDP+ G + IDV+ F D T++++M+GEIGG E EAAQ+ K Sbjct: 177 LGIGQSSAVGIGGDPINGLKHIDVMRAFNDDPDTDAVIMIGEIGGPDEAEAAQW----CK 232 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G I +P+ +GR Sbjct: 233 ANMKKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFTITRNPSEMGRL 292 Query: 293 LVELL 297 L LL Sbjct: 293 LQGLL 297 >gi|295084311|emb|CBK65834.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Bacteroides xylanisolvens XB1A] Length = 286 Score = 295 bits (756), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 146/293 (49%), Positives = 210/293 (71%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+++VQG+TG+ G FH ++ Y T VVGG P KG G +PVF Sbjct: 1 MSILIDKSTRLIVQGITGRDGLFHAKKMKEYG-TNVVGGTSPGKGGIDVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A E+T AN S+I+VP A DAI+E+ +A I +IVCI EGIP LD+++ E+ Sbjct: 56 TMYDAVEQTKANTSIIFVPARFAADAIMEAADAGIRIIVCIAEGIPTLDVIKAHQFAEQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P +GI+PG +F +G+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAMLIGPNCPGLISPGKSMVGILPGQVFLEGNVGVISRSGTLTYEIVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F +LE+F D TE+IV++GEIGG+AEE+AA+++++ KP+V Sbjct: 176 IGIGGDPVVGLHFRQLLEMFQNDPETEAIVLIGEIGGNAEEQAAEYIRNNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG++APPG+ MGHAGA+ISG G A++KI +++ AGI +A P+ I + L Sbjct: 232 AFIAGQSAPPGKQMGHAGAIISGSSGSAKEKIESLEAAGIRVAQEPSDIPKLL 284 >gi|167521159|ref|XP_001744918.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776532|gb|EDQ90151.1| predicted protein [Monosiga brevicollis MX1] Length = 315 Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 176/290 (60%), Positives = 221/290 (76%), Gaps = 9/290 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+ QG TGK GTFH+E AI Y TQ+VGG+ P KG ++++PVF + Sbjct: 21 ALRINKDTKVICQGFTGKQGTFHSEAAIAY-GTQMVGGVSPGKGGRE----HLDLPVFNS 75 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 V EAK+ T A+A+VIYVPP A AI E++EAEIPL VCITEGIP DMVRVK A + + Sbjct: 76 VKEAKDATNADATVIYVPPPFAAAAIFEAMEAEIPLAVCITEGIPQADMVRVKHALVRQD 135 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I G++GI+SRSGTLTYEAV QTS GLGQS Sbjct: 136 KTRLIGPNCPGIIKPGECKIGIMPGHIHVPGNIGIVSRSGTLTYEAVGQTSAVGLGQSLC 195 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID LE+FL D T+ I+M+GEIGGSAEEEAA++LK + +P+V Sbjct: 196 VGIGGDPFNGTNFIDCLEVFLNDPETKGIIMIGEIGGSAEEEAAEYLK---QHNTVRPVV 252 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 F+AG TAPPGR MGHAGA+ISGGKGGA KI A+++AG+ ++ SPA++G Sbjct: 253 SFIAGLTAPPGRRMGHAGAIISGGKGGAGAKIAALEDAGVIVSKSPAQMG 302 >gi|120436119|ref|YP_861805.1| succinyl-CoA ligase subunit alpha [Gramella forsetii KT0803] gi|117578269|emb|CAL66738.1| succinyl-CoA ligase subunit alpha [Gramella forsetii KT0803] Length = 291 Score = 295 bits (755), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 159/299 (53%), Positives = 217/299 (72%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG GTFH EQ I Y T VVGG+ P KG ++N PVF Sbjct: 1 MSVLVNKDSKVIVQGFTGSEGTFHAEQMIEYG-TNVVGGVTPGKGGQK----HLNKPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A E+T A+ ++I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DMV+ ++ Sbjct: 56 TVSDAVEQTGADVTIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMVKASDYIKDR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG +F+KG VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLIGPNCPGVITPGEAKVGIMPGFVFKKGKVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + DE TE IVM+GEIGG E +AAQ++K + G +KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDEETECIVMIGEIGGQLEADAAQWVK---QNGNRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAP GRTMGHAGA++ G + A+ K ++E GI + SPA IG+ + E+L S Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSEDTAQAKKKILRENGIHVVDSPAEIGKKVAEVLNS 291 >gi|333029755|ref|ZP_08457816.1| succinyl-CoA synthetase, alpha subunit [Bacteroides coprosuis DSM 18011] gi|332740352|gb|EGJ70834.1| succinyl-CoA synthetase, alpha subunit [Bacteroides coprosuis DSM 18011] Length = 291 Score = 295 bits (754), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 155/297 (52%), Positives = 213/297 (71%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK TKVLVQG+TG+ G+FHTE+ +L+ TQ+V G P KG T G VPVF Sbjct: 1 MSILIDKKTKVLVQGITGRDGSFHTEK-MLHSHTQIVAGTSPGKGGTTIHG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 V+EA E+T AN S+I+VP A DAI+E+ + I LI+CITEGIP +D+V+ + Sbjct: 56 LVSEAVEKTGANTSIIFVPAPFAADAIMEAAASGIQLIICITEGIPTIDVVKAYKYATRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++ + +GI+P IF+KG +G++SRSGTLTYE V+Q S+ GLGQSTA Sbjct: 116 GALLIGPNCPGLMSSEESLVGILPAQIFKKGPIGVVSRSGTLTYEVVYQLSKAGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV G FID+L F D T+ IV++GEIGG AEE AA+++++ KP+V Sbjct: 176 VGIGGDPVVGLYFIDILRRFELDPETKGIVLIGEIGGDAEECAAEYIREHV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG++AP G+ MGHAGA+IS G G AE+KI ++K AG+ +A P+ I + + ++L Sbjct: 232 AFIAGRSAPAGKQMGHAGAIISSGSGTAEEKIESLKAAGVKVAQKPSEIPQLMKDVL 288 >gi|301629459|ref|XP_002943857.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-like [Xenopus (Silurana) tropicalis] Length = 298 Score = 294 bits (753), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 153/302 (50%), Positives = 213/302 (70%), Gaps = 18/302 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKK-GSTYWTGGNVNVP 57 MSI ++K+TKV+ QG+TGK G FHTE+ Y + V G++PKK G + + N+P Sbjct: 1 MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKHCFVAGVNPKKAGESIF-----NIP 55 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 +++TV EA ++T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ ++ Sbjct: 56 IYSTVKEAAQQTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKM 115 Query: 118 EKSSSR------LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + + L+GPNCPG++TPD KIGIMP I RKG +G++SRSGTLTYEAV + Sbjct: 116 KAKQAAGGKKTLLLGPNCPGLITPDEIKIGIMPXHIHRKGRIGVVSRSGTLTYEAVAMLT 175 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + GLGQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAAQ+ K Sbjct: 176 EVGLGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAAQWCKAH- 234 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 KKP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + +P+ +G+ Sbjct: 235 ---MKKPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLATMQECGFVVTRNPSELGK 291 Query: 292 SL 293 L Sbjct: 292 LL 293 >gi|264680906|ref|YP_003280816.1| succinyl-CoA synthetase, subunit alpha [Comamonas testosteroni CNB-2] gi|299530897|ref|ZP_07044311.1| succinyl-CoA synthetase subunit alpha [Comamonas testosteroni S44] gi|262211422|gb|ACY35520.1| succinyl-CoA synthetase, alpha subunit [Comamonas testosteroni CNB-2] gi|298721118|gb|EFI62061.1| succinyl-CoA synthetase subunit alpha [Comamonas testosteroni S44] Length = 299 Score = 294 bits (753), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 156/305 (51%), Positives = 211/305 (69%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+TKV+ QG+TGK G FHTE+ Y + V G++PKK ++P+ Sbjct: 1 MSIFINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGEKI----FDIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V +A + T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ +++ Sbjct: 57 FGSVKDAAKETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMK 116 Query: 119 KS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TPD KIGIMPG I +KG VG++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRVGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+GQS+AVGIGGDP+ G + IDV+ F D T++++M+GEIGG E EAAQ+ K Sbjct: 177 LGIGQSSAVGIGGDPINGLKHIDVMRAFNDDPDTDAVIMIGEIGGPDEAEAAQW----CK 232 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G I +P+ +GR Sbjct: 233 ANMKKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFTITRNPSEMGRL 292 Query: 293 LVELL 297 L LL Sbjct: 293 LQGLL 297 >gi|209885685|ref|YP_002289542.1| succinate-CoA ligase, alpha subunit subfamily [Oligotropha carboxidovorans OM5] gi|209873881|gb|ACI93677.1| succinate-CoA ligase, alpha subunit subfamily [Oligotropha carboxidovorans OM5] Length = 293 Score = 294 bits (753), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 154/297 (51%), Positives = 206/297 (69%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVDK TKVL QG+TG AGT HT + + Y T+VV G+ P KG ++ +PV+ Sbjct: 1 MAILVDKETKVLCQGMTGWAGTHHTARMMEYG-TEVVAGVTPGKGGRT----HLELPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+AK T ANAS+I+VPP+ A A+IE+IEAE+PL+V +TE +P LDMVRV+ L+ S Sbjct: 56 TVAQAKAETGANASMIFVPPANAAKAMIEAIEAELPLVVVVTERVPALDMVRVRQALDGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPN GIL P+ CKIG+M R G VGI+SRS +LT E V Q S EGLGQST Sbjct: 116 KTRLVGPNSQGILAPEICKIGVMATGSERPGGVGIVSRSASLTSEVVAQISGEGLGQSTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ G + +ELFLAD TE IV++GEIGG+ E+E A++L+ R KP+V Sbjct: 176 VGVGGDPIHGMSMVQCVELFLADPETEGIVLIGEIGGTEEQEVAEYLQ---ARKASKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG+ APP R MGH+G + G+G A KI A++ A + IAPS +GR++ + L Sbjct: 233 ALIAGQYAPPERRMGHSGTLTMYGRGDAGSKIAALERASVEIAPSSHLVGRTIRDAL 289 >gi|110668755|ref|YP_658566.1| succinate--CoA ligase, alpha subunit (ADP-forming) [Haloquadratum walsbyi DSM 16790] gi|109626502|emb|CAJ52964.1| succinate--CoA ligase, alpha subunit (ADP-forming) [Haloquadratum walsbyi DSM 16790] Length = 289 Score = 294 bits (753), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 150/298 (50%), Positives = 201/298 (67%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI VD T+V+VQG+TG G FHT + I Y T VV G P +G G VPV+ Sbjct: 1 MSIFVDDETRVVVQGITGGEGKFHTSEMITYG-TNVVAGAVPGRGGDEING----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A ANA+V++VPP A DAI E+++A++ L+V ITEGIP DM +V RL + Sbjct: 56 TVDAAVRTEDANAAVVFVPPRFASDAIFEALDADLELVVAITEGIPTQDMTKVHQRLSEV 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TP K+GI+PG+IF GSVG++SRSGTLTY+ V + +GQ+TA Sbjct: 116 DTRLIGPNCPGIITPGQTKLGILPGNIFEPGSVGLVSRSGTLTYQVVSNLTDRDIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+ F +D TE++VM GEIGG EE+AA F+ ++ P+ Sbjct: 176 IGIGGDPIVGTSFIDTLDAFESDPHTEAVVMCGEIGGEDEEQAAAFITEQ----MDTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G AE KINA+ +A + + +P + + L Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAESKINALTDADVPVGNTPDEVAEYIESFL 289 >gi|313203889|ref|YP_004042546.1| succinyL-CoA synthetase, alpha subunit [Paludibacter propionicigenes WB4] gi|312443205|gb|ADQ79561.1| succinyl-CoA synthetase, alpha subunit [Paludibacter propionicigenes WB4] Length = 291 Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 153/297 (51%), Positives = 206/297 (69%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTK+LVQG+TG+ G FHT + Y T VV G+ P K G VPVF Sbjct: 1 MSILVNKNTKLLVQGITGRDGKFHTGKMREYG-TNVVAGVSPGKEGVVLDG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VA A E T AN S+I+VP + A DAI+E+ EA I L++ I+EG+P+ DM+R+ L+++ Sbjct: 56 SVASAVEATGANTSIIFVPAAFAADAILEASEAGIELVIAISEGLPIQDMIRITPILKQN 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG++TP +GI+P +IF+KG++G +SRSGTLTYE V ++ GQ+T Sbjct: 116 GTLLIGPNCPGLITPGESLVGILPANIFKKGNIGFISRSGTLTYEVVNLLTENDFGQTTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV G FID+LE F D T ++V++GEIGG AEE+AAQF+ D+ KP+V Sbjct: 176 VGIGGDPVAGLYFIDLLERFENDPETIAVVVIGEIGGDAEEQAAQFIADK----MTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAPPG+ MGHAGA+IS G G A +KI A +AG+ +A P I L + L Sbjct: 232 AFIAGQTAPPGKRMGHAGAIISSGSGTAAEKIAAFNKAGVPVAKEPNEIPELLRQKL 288 >gi|302404970|ref|XP_003000322.1| succinyl-CoA ligase subunit alpha [Verticillium albo-atrum VaMs.102] gi|261360979|gb|EEY23407.1| succinyl-CoA ligase subunit alpha [Verticillium albo-atrum VaMs.102] Length = 329 Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 165/294 (56%), Positives = 209/294 (71%), Gaps = 9/294 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ TKVL QG TGK GTFH +QAI Y T+VVGG +PKK + G +PVF Sbjct: 37 NLRINGETKVLFQGFTGKQGTFHAQQAIDY-GTKVVGGTNPKKAGSEHLG----LPVFGN 91 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V+EA + T A A+ I+VPP A I E+IEAEIPL+VCITEGIP M + SS Sbjct: 92 VSEAVKATGATATAIFVPPPVAAAGIEEAIEAEIPLVVCITEGIPQHGMFCAPSPRPVSS 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 + PNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 152 A----PNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLVV 207 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID L+ FL DE T+ I+M+GEIGGSAEE+AA+FL+ KP+V Sbjct: 208 GIGGDPFSGTNFIDCLQTFLKDEETDGIIMIGEIGGSAEEDAAEFLRANNTVNGGKPVVS 267 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L + Sbjct: 268 FIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALEAAGVIVERSPAGLGKALYD 321 >gi|223999547|ref|XP_002289446.1| precursor of synthetase [Thalassiosira pseudonana CCMP1335] gi|220974654|gb|EED92983.1| precursor of synthetase [Thalassiosira pseudonana CCMP1335] Length = 299 Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 170/297 (57%), Positives = 215/297 (72%), Gaps = 8/297 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DK+T+V+ QG TGK GTFH+ QAI Y T +VGG+ PKKG G +PVF +V Sbjct: 7 VWIDKDTRVICQGFTGKQGTFHSTQAIEY-GTNMVGGVTPKKGGQEHLG----LPVFDSV 61 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKSS 121 A+A +ASVIYVPP AI+++IE EIPL+V ITEG+P DMVRVK A L + Sbjct: 62 ADAVLEVKPDASVIYVPPPYCAAAILDAIENEIPLVVAITEGVPQQDMVRVKKALLSQDK 121 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G +G++SRSGTLTYEAV QT+ GLGQST V Sbjct: 122 TRLIGPNCPGIIKPGECKIGIMPGYIHKAGKIGVVSRSGTLTYEAVHQTTVTGLGQSTCV 181 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE F D TE I+M+GEIGGSAEEEAA++ + KP+VG Sbjct: 182 GIGGDPFNGTNFIDCLERFRDDPQTEGIIMIGEIGGSAEEEAAEWWANNGD--PNKPVVG 239 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA+++GGKGGA +K A++ AGI + SPA++G +++ +G Sbjct: 240 FIAGMTAPPGRRMGHAGAIVAGGKGGANEKFAALEAAGIHVTRSPAQLGTTMMRAMG 296 >gi|171914559|ref|ZP_02930029.1| succinyl-CoA synthetase, alpha subunit [Verrucomicrobium spinosum DSM 4136] Length = 302 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 162/307 (52%), Positives = 219/307 (71%), Gaps = 12/307 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD +T++LVQG+TG G+ H + ++ Y TQ+V G+ P KG + G VPV+ Sbjct: 1 MSILVDPSTRILVQGITGDFGSRHAKASLDY-GTQLVAGVTPGKGGQTFDHGTHKVPVYD 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T A SVI+VPP A DAI+E ++A + L+VCITEGIPV DM++VK+ ++ S Sbjct: 60 TVDEAVKQTGATVSVIFVPPPFAADAILEGVDAGLDLVVCITEGIPVNDMIKVKSAMQGS 119 Query: 121 SSRLIGPNCPGILTPDS-------CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +RLIGPNCPG++TP + C+IGI PG I ++G++G++SRSGTLTYEAV+Q + Sbjct: 120 KTRLIGPNCPGLVTPGTGDKSYGGCRIGIAPGYIHKRGNIGVVSRSGTLTYEAVWQLTTR 179 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G GQST VGIGGDPV GT +DVL++F D TE I+M+GEIGGSAE EAA++ AK Sbjct: 180 GYGQSTCVGIGGDPVNGTSHLDVLKMFNEDPETEGIIMIGEIGGSAEAEAARW----AKE 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KKPI GF+AG TAPPGR MGHAGA++ G + AE K + E GI ++ SPA + +L Sbjct: 236 NCKKPIAGFIAGATAPPGRRMGHAGAIVGGEEDTAEAKKKILAECGIAVSDSPADMAVTL 295 Query: 294 VELLGSL 300 + ++G L Sbjct: 296 LRVMGKL 302 >gi|168699853|ref|ZP_02732130.1| succinyl-CoA synthetase, alpha subunit [Gemmata obscuriglobus UQM 2246] Length = 304 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 172/305 (56%), Positives = 219/305 (71%), Gaps = 13/305 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV--NVPV 58 MSILVDK+T+V+ QG+TGK G FHT+Q +LY TQ VGG P G T W G +PV Sbjct: 1 MSILVDKSTRVICQGITGKHGAFHTDQCLLY-GTQFVGGTKPGAGGTTWKGDKSGKELPV 59 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TVA+A + T A AS+I+VPP+GA AIIE+ +A I LIV ITEGIPVLDM + K L+ Sbjct: 60 FNTVADAVKATGATASMIFVPPAGAAAAIIEAADAGIQLIVAITEGIPVLDMAKAKRYLK 119 Query: 119 -KSSSRLIGPNCPGILTPDSCKIGIMPGSIFR-----KGSVGILSRSGTLTYEAVFQTSQ 172 K RL+GPNCPG++TP CKIGIMPG I + + +G++SRSGTLTYEAVFQ + Sbjct: 120 TKPGVRLVGPNCPGVITPGQCKIGIMPGHIHKPCGPGEKGIGVISRSGTLTYEAVFQLTA 179 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GL QST VGIGGDPV GT I++LE+F DE T +I+M+GEIGG+AEE AA A Sbjct: 180 LGLPQSTCVGIGGDPVIGTNQIELLEMFEKDEGTSAILMIGEIGGTAEEAAAA----YAA 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 + KP+ F+AG+TAPPGR MGHAGA++SGG G AEDKI A++ AG +AP+PA +G + Sbjct: 236 KNVTKPLAAFIAGQTAPPGRRMGHAGAIVSGGSGKAEDKIAALEAAGFVVAPTPADLGAA 295 Query: 293 LVELL 297 + + + Sbjct: 296 VQQAI 300 >gi|332881132|ref|ZP_08448793.1| succinyl-CoA synthetase, alpha subunit [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680927|gb|EGJ53863.1| succinyl-CoA synthetase, alpha subunit [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 291 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 162/297 (54%), Positives = 212/297 (71%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+KV+VQG TG GTFH EQ I Y T VVGGI P KG G PVF Sbjct: 1 MSVLVNKNSKVIVQGFTGSEGTFHAEQMIAY-GTNVVGGITPNKGGQTHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VPP+ A DAI+E+ EA I +I+ ITEGIPV DMV+V A ++ Sbjct: 56 TVADAVKATGADVSIIFVPPAFAADAIMEAAEAGIKVIITITEGIPVADMVKVAAYIKNR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP+ K+GIMPG IF+KG VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLIGPNCPGVITPEEAKVGIMPGFIFKKGHVGIVSKSGTLTYEAADQIVRQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D T IVM+GEIGG E EAA+++K G KKP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETHCIVMIGEIGGQLEPEAARWIK---ANGNKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAP GRTMGHAGA++ G + AE K ++E G+ + SPA+IG + E++ Sbjct: 233 SFIAGETAPKGRTMGHAGAIVGGAEDTAEAKKRILRECGVHVVDSPAKIGEKVKEIM 289 >gi|319764916|ref|YP_004128853.1| succinyl-CoA synthetase, alpha subunit [Alicycliphilus denitrificans BC] gi|330827120|ref|YP_004390423.1| succinyl-CoA synthetase subunit alpha [Alicycliphilus denitrificans K601] gi|317119477|gb|ADV01966.1| succinyl-CoA synthetase, alpha subunit [Alicycliphilus denitrificans BC] gi|329312492|gb|AEB86907.1| succinyl-CoA synthetase, alpha subunit [Alicycliphilus denitrificans K601] Length = 297 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 154/305 (50%), Positives = 214/305 (70%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+T+V+ QG+TGK G FHTE+ Y + V G++PKK ++P+ Sbjct: 1 MSIYINKDTRVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGEKI----FDIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +A ++T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ +++ Sbjct: 57 YGSVKDAAQQTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMK 116 Query: 119 KSSSR------LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TPD KIGIMPG I +KG VG++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKRTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRVGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+GQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAA++ KD Sbjct: 177 LGIGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAARWCKDNM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G I +P+ +GR Sbjct: 236 ---KKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFRITRNPSEMGRI 292 Query: 293 LVELL 297 L LL Sbjct: 293 LKGLL 297 >gi|108804114|ref|YP_644051.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Rubrobacter xylanophilus DSM 9941] gi|108765357|gb|ABG04239.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rubrobacter xylanophilus DSM 9941] Length = 292 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 152/298 (51%), Positives = 207/298 (69%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL D+NT++LVQG+TG+ G FHT + +L T+VV G+ P KG + G VPVF Sbjct: 1 MAILADQNTRLLVQGITGREGAFHTRR-MLGSGTRVVAGVTPGKGGQSFEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+ A T AN S+I+VP A DAI E+++A I + CITEG+PV DM++V L+ Sbjct: 56 TVSRAVRETGANTSIIFVPAPFAADAIYEALDAGIEAVCCITEGVPVHDMMKVTDYLKLR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPGI +P + IMP IF G VG++SRSGTLTY+ V + +Q GLGQSTA Sbjct: 116 GATLIGPNCPGIFSPGKANVSIMPADIFSPGGVGVVSRSGTLTYQIVNELTQIGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT+FI+VL F AD TE +VM+GEIGG+AE+ AA+++ E + P+V Sbjct: 176 VGIGGDPIIGTDFIEVLRKFEADPETECVVMIGEIGGNAEQRAAEYISSEM----ETPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+TMGHAGA++SGG+ A+ K A++ AGI A +P+ + R + E LG Sbjct: 232 AYIAGFTAPEGKTMGHAGAIVSGGETTAQAKSEALRRAGIRAAENPSEVARLVAEALG 289 >gi|124265264|ref|YP_001019268.1| succinyl-CoA synthetase subunit alpha [Methylibium petroleiphilum PM1] gi|124258039|gb|ABM93033.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methylibium petroleiphilum PM1] Length = 297 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 156/305 (51%), Positives = 211/305 (69%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++KNTKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKNTKVITQGITGKTGQFHTRGCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EA +T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ +++ Sbjct: 57 YASVKEAAGQTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVKDMLLVRNKMK 116 Query: 119 KS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q S+ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVAQLSE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV+ F D T++++M+GEIGG E EAA++ K Sbjct: 177 LGLGQSSAVGIGGDPINGLKHIDVMRAFNDDPDTDAVIMIGEIGGPDEAEAARW----CK 232 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + +P+ +G+ Sbjct: 233 ANMKKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFTVTRNPSEMGKL 292 Query: 293 LVELL 297 L LL Sbjct: 293 LKGLL 297 >gi|120613314|ref|YP_972992.1| succinyl-CoA synthetase subunit alpha [Acidovorax citrulli AAC00-1] gi|326319397|ref|YP_004237069.1| succinyl-CoA synthetase subunit alpha [Acidovorax avenae subsp. avenae ATCC 19860] gi|120591778|gb|ABM35218.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Acidovorax citrulli AAC00-1] gi|323376233|gb|ADX48502.1| succinyl-CoA synthetase, alpha subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 298 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 153/302 (50%), Positives = 213/302 (70%), Gaps = 18/302 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKK-GSTYWTGGNVNVP 57 MSI ++K+TKV+ QG+TGK G FHTE+ Y + V G++PKK G + + N+P Sbjct: 1 MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGESIF-----NIP 55 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 ++ +V EA ++T A SVIYVPP+GA AI E++EA++ + +CITEGIPV DM+ V+ ++ Sbjct: 56 IYGSVKEAAQQTGATVSVIYVPPAGAAAAIWEAVEADLDMAICITEGIPVRDMLEVRNKM 115 Query: 118 EKS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV + Sbjct: 116 KAKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAMLT 175 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + GLGQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAAQ+ Sbjct: 176 EVGLGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAAQW----C 231 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 K KKPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + +P+ +G+ Sbjct: 232 KANMKKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFVVTRNPSELGK 291 Query: 292 SL 293 L Sbjct: 292 LL 293 >gi|255009308|ref|ZP_05281434.1| succinyl-CoA synthetase alpha chain [Bacteroides fragilis 3_1_12] gi|313147061|ref|ZP_07809254.1| succinyl-CoA synthetase subunit alpha [Bacteroides fragilis 3_1_12] gi|313135828|gb|EFR53188.1| succinyl-CoA synthetase subunit alpha [Bacteroides fragilis 3_1_12] Length = 289 Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 148/289 (51%), Positives = 205/289 (70%), Gaps = 8/289 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T++LVQG+TG+ G FH ++ Y T VVGG P KG T + PVF Sbjct: 1 MSILIDKSTRLLVQGITGRDGLFHAKKMAEYG-TNVVGGTSPGKGGTMI---DDTFPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA RT AN SVI+VP A DAI+E+ +A I LI+CITEGIP LD+++ +E Sbjct: 57 TMYEAVRRTQANTSVIFVPARFAADAIMEAADAGIRLIICITEGIPTLDIIKAYRFVELK 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++LIGPNCPG+++P +GI+PG +F G++G++SRSGTLTYE V + +G+GQSTA Sbjct: 117 GAKLIGPNCPGLISPGKSLVGILPGQVFTPGNIGVISRSGTLTYEIVSHLTAKGMGQSTA 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDPV G F D+L + D T++IVM+GEIGG+AEE AA +++ KP+V Sbjct: 177 IGMGGDPVVGLYFRDLLGMLQNDPQTDAIVMIGEIGGNAEEAAATYIRKHV----TKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 F+AGK+APPG+ MGHAGA+ISG G A +KI+A++ AGI +A P++I Sbjct: 233 AFIAGKSAPPGKQMGHAGAIISGSSGSAAEKISALEAAGIRVAGEPSKI 281 >gi|47210731|emb|CAF89706.1| unnamed protein product [Tetraodon nigroviridis] Length = 311 Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 174/295 (58%), Positives = 229/295 (77%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++++TKV+ QG TGK GTFH++Q++ Y +Q+VGG+ P KG G +PVF + Sbjct: 14 NLCINRSTKVICQGFTGKQGTFHSQQSLDY-GSQLVGGVSPGKGGKTHLG----LPVFNS 68 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA ERT A+A+VIYVPP A AIIE+I+AE+PL+VCITEGIP DMV+VK RL +S Sbjct: 69 VKEATERTGADATVIYVPPPYAAAAIIEAIDAEVPLVVCITEGIPQQDMVKVKHRLLRQS 128 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 129 TTRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 188 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D TE I+++GEIGGSAEE AA++LK+ KP+V Sbjct: 189 IGIGGDPFNGTNFIDCLEVFLQDPKTEGIILIGEIGGSAEENAAEYLKEHNSGSNGKPVV 248 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 249 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTIFK 303 >gi|330443808|ref|YP_004376794.1| succinyl-Coa synthetase, alpha chain [Chlamydophila pecorum E58] gi|328806918|gb|AEB41091.1| succinyl-Coa synthetase, alpha chain [Chlamydophila pecorum E58] Length = 291 Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 155/300 (51%), Positives = 213/300 (71%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M L+ ++ ++ QG+TGKAG+FHTEQ + Y + VGG+ P KG + ++N+PV+ Sbjct: 1 MFQLLSRDLPIITQGITGKAGSFHTEQCLAY-GSNFVGGVTPGKGGST----HLNLPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA++ T A++I+VPP A +AIIE+ A + LIVCITEGIPV DM+ V +E S Sbjct: 56 SVLEARKETGCQATMIFVPPPFAAEAIIEAEAAGVELIVCITEGIPVRDMLEVANLMENS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SS+LIGPNCPGI+ P +CKIGIMPG I G+VG++SRSGTLTYEAV+Q +Q +GQS Sbjct: 116 SSQLIGPNCPGIIKPGACKIGIMPGYIHLPGNVGLVSRSGTLTYEAVWQLTQRNIGQSVC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FID L F D T+ I+M+GEIGGSAEE+AA+++++ KP+V Sbjct: 176 VGIGGDPLNGTSFIDALLQFERDPQTQCILMIGEIGGSAEEDAAEWIRENC----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAP G+ MGHAGA+IS G A+ K+ A++ AG+ + SPA IG ++ +L L Sbjct: 232 AFIAGATAPKGKRMGHAGAIISSNSGDAQSKMQALRVAGVFVVESPAMIGEAVEAVLQDL 291 >gi|148642288|ref|YP_001272801.1| succinyl-CoA synthetase subunit alpha [Methanobrevibacter smithii ATCC 35061] gi|222444540|ref|ZP_03607055.1| hypothetical protein METSMIALI_00152 [Methanobrevibacter smithii DSM 2375] gi|148551305|gb|ABQ86433.1| succinyl-CoA synthetase, alpha subunit, SucD [Methanobrevibacter smithii ATCC 35061] gi|222434105|gb|EEE41270.1| hypothetical protein METSMIALI_00152 [Methanobrevibacter smithii DSM 2375] Length = 286 Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 149/287 (51%), Positives = 202/287 (70%), Gaps = 10/287 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D +TK LVQG+TGK G+FHTEQ + Y T ++ G+ P KG + G VPVF ++ Sbjct: 2 ILLDNDTKCLVQGITGKQGSFHTEQMLEY-NTNILAGVTPGKGGQDFLG----VPVFNSI 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EAKE T N+S+I+VP A DA ESI + L+V I+E IPV D +++ + + Sbjct: 57 EEAKEETGVNSSIIFVPAKFAKDAAFESIR-HLDLVVIISEHIPVHDSLKIMNYAREMDT 115 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PGI+TP K+GIMP IF +G+VG++SRSGTLTYE Q ++ G+GQST VG Sbjct: 116 TVIGPNTPGIITPGVGKLGIMPTHIFEEGNVGVISRSGTLTYEVASQLTRGGIGQSTCVG 175 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT +ID+L+ F D+ TE+IV++GEIGG+AEE AA+F+KD KP+V + Sbjct: 176 IGGDPVIGTNYIDILKKFEEDDDTEAIVLIGEIGGNAEENAAEFIKDNI----SKPVVSY 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +AG+TAPPG+ MGHAGA+I G G AE KINA+ +AG+ +A P+ I Sbjct: 232 IAGRTAPPGKRMGHAGAIIHGSSGTAESKINALTDAGVSVAKMPSEI 278 >gi|325109410|ref|YP_004270478.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Planctomyces brasiliensis DSM 5305] gi|324969678|gb|ADY60456.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Planctomyces brasiliensis DSM 5305] Length = 299 Score = 292 bits (748), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 160/299 (53%), Positives = 214/299 (71%), Gaps = 14/299 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ------TQVVGGIHPKKGSTYWTGGNV 54 M+ILVD+ TK++ QG+TG AG FH++Q Y + +VGG+ P KG Sbjct: 1 MAILVDRETKIITQGITGNAGLFHSQQCRAYAEEVRPGEQVMVGGVTPGKGGQTVD---- 56 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + PVF TV EA + T AN S+I+VPP GDAI+E+ +A I LIV ITEGIPV+DM RV Sbjct: 57 DFPVFNTVEEAVKETGANTSLIFVPPPFCGDAILEAADAGIELIVAITEGIPVMDMARVA 116 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 +LE LIGPNCPGI+TP KIGIMPG I + G +G++S+SGTLTYEA +Q G Sbjct: 117 KKLEDYPCTLIGPNCPGIITPGVAKIGIMPGYIHKPGRIGLISKSGTLTYEATWQLGNLG 176 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +GQSTA+GIGGDP+ GT FID+L++F D+ T++I+M+GEIGG+AE EAA ++K+ Sbjct: 177 MGQSTAIGIGGDPIIGTTFIDLLDMFEEDDETDAILMIGEIGGTAEIEAADYIKEYI--- 233 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+ F+AGKTAPPG+ MGHAGA+ISGGKG AE+K+ A++ AG+ +A SPA +G ++ Sbjct: 234 -SKPVGAFIAGKTAPPGKRMGHAGAIISGGKGTAEEKVEALEAAGVVVAESPADMGAAV 291 >gi|221126323|ref|XP_002165744.1| PREDICTED: similar to mitochondrial putative GDP-forming succinate-CoA ligase alpha subunit [Hydra magnipapillata] gi|260221893|emb|CBA30912.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Curvibacter putative symbiont of Hydra magnipapillata] Length = 297 Score = 292 bits (748), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 154/306 (50%), Positives = 213/306 (69%), Gaps = 18/306 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKK-GSTYWTGGNVNVP 57 MSI ++K+TKV+ QG+TGK G FHTE+ Y + V G++PKK G + + N+P Sbjct: 1 MSIFINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGESIF-----NIP 55 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 ++ +V +A T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ R+ Sbjct: 56 IYASVKDAAAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVKDMLEVRNRM 115 Query: 118 EKS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + Sbjct: 116 KAKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLT 175 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + GLGQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAA++ Sbjct: 176 EIGLGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAARW----C 231 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 K KKP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + +P+ + + Sbjct: 232 KLNMKKPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAVMEECGFKVTRNPSEMAK 291 Query: 292 SLVELL 297 L LL Sbjct: 292 LLKALL 297 >gi|190346572|gb|EDK38689.2| hypothetical protein PGUG_02787 [Meyerozyma guilliermondii ATCC 6260] Length = 404 Score = 292 bits (748), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 222/298 (74%), Gaps = 10/298 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFT 60 ++ V+ +TKV+ QG TG+ GTFH EQAI Y T++VGG +PKK GST+ ++ PVF Sbjct: 105 NLKVNSDTKVIYQGFTGRQGTFHAEQAIAY-GTKIVGGTNPKKAGSTH-----LDRPVFA 158 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 V++A + T ANA+ I+VPPS A AI E+IEAEI L V ITEGIP DMVR+ L+ + Sbjct: 159 NVSDAIKETGANATAIFVPPSIAAAAIEEAIEAEIELAVAITEGIPQHDMVRIAQMLKTQ 218 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S +RL+GPNCPG++ PD CKIGIMP I ++G VG++SRSGTLTYEAV QT+ GLGQS Sbjct: 219 SKTRLVGPNCPGLIAPDQCKIGIMPSHIHQRGKVGVISRSGTLTYEAVAQTTGVGLGQSL 278 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE--AKRGRKK 237 +G+GGDP GT FID L LFL D+ TE I+++GEIGG+AEEEA++FLK + K Sbjct: 279 VIGMGGDPFPGTNFIDALTLFLEDKETEGIILIGEIGGTAEEEASEFLKQHNLTRPDGPK 338 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 P+V F+AG +APPGR MGHAGA+ISGGKG A+ KI A++ AG+ + SPAR+G SL+E Sbjct: 339 PVVSFIAGVSAPPGRRMGHAGAIISGGKGDAKSKIAALESAGVVVERSPARLGNSLLE 396 >gi|256818907|ref|YP_003140186.1| succinyl-CoA synthetase, alpha subunit [Capnocytophaga ochracea DSM 7271] gi|315224288|ref|ZP_07866122.1| succinyl-CoA synthetase subunit alpha [Capnocytophaga ochracea F0287] gi|256580490|gb|ACU91625.1| succinyl-CoA synthetase, alpha subunit [Capnocytophaga ochracea DSM 7271] gi|314945678|gb|EFS97693.1| succinyl-CoA synthetase subunit alpha [Capnocytophaga ochracea F0287] Length = 291 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 160/297 (53%), Positives = 211/297 (71%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+KV+VQG TG GTFH EQ I Y T VVGGI P KG G PVF Sbjct: 1 MSVLVNKNSKVIVQGFTGSEGTFHAEQMIAY-GTNVVGGITPNKGGQTHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DMV+V A ++ Sbjct: 56 TVADAVKATGADVSIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMVKVAAYIKNR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP+ K+GIMPG IF+KG VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLVGPNCPGVITPEEAKVGIMPGFIFKKGHVGIVSKSGTLTYEAADQIVRQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D T IVM+GEIGG E EAA+++K G KKP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETHCIVMIGEIGGQLEPEAARWIK---ANGNKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAP GRTMGHAGA++ G AE K ++E G+ + SPA+IG + E++ Sbjct: 233 SFIAGETAPKGRTMGHAGAIVGGADDTAEAKKRILRECGVHVVDSPAKIGEKVAEIM 289 >gi|241764839|ref|ZP_04762844.1| succinyl-CoA synthetase, alpha subunit [Acidovorax delafieldii 2AN] gi|241365634|gb|EER60358.1| succinyl-CoA synthetase, alpha subunit [Acidovorax delafieldii 2AN] Length = 298 Score = 292 bits (747), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 154/302 (50%), Positives = 211/302 (69%), Gaps = 18/302 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKK-GSTYWTGGNVNVP 57 MSI ++K+TKV+ QG+TGK G FHTE+ Y + V G++PKK G + + N+P Sbjct: 1 MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGESIF-----NIP 55 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 ++ +V EA +T A SVIYVPP+GA AI E++EA++ + +CITEGIPV DM+ V+ ++ Sbjct: 56 IYASVKEAATQTGATVSVIYVPPAGAAAAIWEAVEADLDMAICITEGIPVRDMLEVRNKM 115 Query: 118 EKS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + + L+GPNCPGI+TPD KIGIMPG I RKG +G++SRSGTLTYEAV + Sbjct: 116 KAKEAAGGKKTLLLGPNCPGIITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAMLT 175 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + GLGQSTAVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAAQ+ Sbjct: 176 EVGLGQSTAVGIGGDPINGLKHIDVMKAFNEDPDTDAVIMIGEIGGPDEAEAAQW----C 231 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 K KKPIVGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G + +P+ +G+ Sbjct: 232 KANMKKPIVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFVVTRNPSELGK 291 Query: 292 SL 293 L Sbjct: 292 LL 293 >gi|296135286|ref|YP_003642528.1| succinyl-CoA synthetase, alpha subunit [Thiomonas intermedia K12] gi|295795408|gb|ADG30198.1| succinyl-CoA synthetase, alpha subunit [Thiomonas intermedia K12] Length = 298 Score = 292 bits (747), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 153/305 (50%), Positives = 212/305 (69%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 M+IL+++ TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MAILINQGTKVITQGITGKTGQFHTRMCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TVA+A+ T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ R++ Sbjct: 57 YGTVADARAATGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVKDMLLVRNRMK 116 Query: 119 KS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TPD KIGIMPG I RKG +GI+SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGIVSRSGTLTYEAVAQVTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + ID++ F D T++++M+GEIGGS E EAA++ K Sbjct: 177 LGLGQSSAVGIGGDPINGLKHIDIMRAFNDDPDTDAVIMIGEIGGSDEAEAARWCKAHM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKP+VGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G + +P+ +G+ Sbjct: 236 ---KKPVVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFTVTRNPSEMGKL 292 Query: 293 LVELL 297 L ++L Sbjct: 293 LKQVL 297 >gi|50426799|ref|XP_461997.1| DEHA2G10384p [Debaryomyces hansenii CBS767] gi|49657667|emb|CAG90471.1| DEHA2G10384p [Debaryomyces hansenii] Length = 323 Score = 292 bits (747), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 170/297 (57%), Positives = 219/297 (73%), Gaps = 8/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V+ +TKV+ QG TGK GTFH EQAI Y TQVVGG +PKK + +++ PVF T Sbjct: 24 NLKVNSDTKVIYQGFTGKQGTFHAEQAIAYG-TQVVGGTNPKKAGSK----HLDRPVFAT 78 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A+A+ I+VPPS A AI E+IEAEI L V ITEGIP DMVR+ L+ +S Sbjct: 79 VKDAMKETGASATAIFVPPSIAAGAIEEAIEAEIALAVAITEGIPQHDMVRIAQMLKTQS 138 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P+ CKIGIMP I ++G VG++SRSGTLTYEAV QT+Q GLGQS Sbjct: 139 KTRLVGPNCPGIIAPEQCKIGIMPSHIHKRGKVGVISRSGTLTYEAVSQTTQVGLGQSLV 198 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE--AKRGRKKP 238 +G+GGDP GT FID L LFL D TE I+++GEIGG+AEEEAA+FLK + KP Sbjct: 199 IGMGGDPFPGTNFIDALTLFLNDPETEGIILIGEIGGTAEEEAAEFLKQHNLTRPEGPKP 258 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 +V F+AG +APPGR MGHAGA+++GGKG A KI A++ AG+ + SPAR+G SL++ Sbjct: 259 VVSFIAGVSAPPGRRMGHAGAIVAGGKGDANSKIAALQSAGVVVEKSPARLGNSLLQ 315 >gi|222112554|ref|YP_002554818.1| succinyl-CoA synthetase subunit alpha [Acidovorax ebreus TPSY] gi|221731998|gb|ACM34818.1| succinyl-CoA synthetase, alpha subunit [Acidovorax ebreus TPSY] Length = 297 Score = 292 bits (747), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 155/305 (50%), Positives = 212/305 (69%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+TKV+ QG+TGK G FHTE+ Y + V G++PKK ++P+ Sbjct: 1 MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGEKI----FDIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V +A + T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ +++ Sbjct: 57 FGSVKDAAKETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMK 116 Query: 119 KSSSR------LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TPD KIGIMPG I +KG VG++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKRTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRVGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+GQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAA++ K Sbjct: 177 LGIGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAARW----CK 232 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G I +P+ +GR Sbjct: 233 ANMKKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFTITRNPSEMGRL 292 Query: 293 LVELL 297 L LL Sbjct: 293 LKGLL 297 >gi|89890686|ref|ZP_01202195.1| succinyl-CoA ligase alpha-chain [Flavobacteria bacterium BBFL7] gi|89516831|gb|EAS19489.1| succinyl-CoA ligase alpha-chain [Flavobacteria bacterium BBFL7] Length = 290 Score = 292 bits (747), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 157/298 (52%), Positives = 217/298 (72%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG +++ PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIEYG-TNVVGGVTPGKGGQT----HLDKPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA E+ AN ++I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DMV+ +++ Sbjct: 56 TVSEAVEKVGANVTIIFVPPAFAADAIMEAADAGIEVIITITEGIPVADMVKAADYIKEK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + RL+GPNCPG++TP K+GIMPG +F+KG VGI+S+SGTLTYEA Q ++G G STA Sbjct: 116 NCRLVGPNCPGVITPGEAKVGIMPGFVFKKGKVGIVSKSGTLTYEASDQVVKQGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +ELF+ D TE+IVM+GEIGG E +AAQ++K G KKP++ Sbjct: 176 IGIGGDPIIGTTTKEAVELFMNDPETEAIVMIGEIGGQLEADAAQWIK---ATGNKKPVI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + A+ K M+E+GI + SPA IG+ + E+LG Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSEDTAQAKKAIMRESGIHVVDSPAEIGKKVAEVLG 290 >gi|257092291|ref|YP_003165932.1| succinyl-CoA synthetase subunit alpha [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044815|gb|ACV34003.1| succinyl-CoA synthetase, alpha subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 297 Score = 292 bits (747), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 151/305 (49%), Positives = 209/305 (68%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TK++ QG+TGK G FHTE+ Y + V G++PKK G +P+ Sbjct: 1 MSILINKDTKIITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGESIFG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V +A +T A SVIYVPP GA AI E++EA++ L+VCITEGIPV DM+ V+ ++ Sbjct: 57 FGSVKDAAAQTGATVSVIYVPPPGAAAAIWEAVEADLDLVVCITEGIPVRDMLVVRNKML 116 Query: 119 KS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ Sbjct: 117 RKEAAGGKKTLLLGPNCPGLITPDEVKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVG GGDP+ G + ID++ LF D T++++M+GEIGG E +AA + K Sbjct: 177 IGLGQSSAVGTGGDPINGLKHIDIMRLFNDDPDTDAVIMIGEIGGPDEADAAVW----CK 232 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G + P+ +G+ Sbjct: 233 ANMKKPIVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFTVTRDPSEMGKL 292 Query: 293 LVELL 297 + L+ Sbjct: 293 IKALI 297 >gi|285808573|gb|ADC36094.1| succinyl-CoA synthetase alpha subunit [uncultured bacterium 164] Length = 271 Score = 291 bits (746), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 159/267 (59%), Positives = 203/267 (76%), Gaps = 9/267 (3%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 T +VGG+ P KG T G VPVF TV +A TAANASV+YVPP+ A DAI+E+ +A Sbjct: 9 TNIVGGVTPGKGGTTHEG----VPVFNTVGDAVRDTAANASVVYVPPAFAADAIMEAADA 64 Query: 94 EIPLIVCITEGIPVLDMVRVKARL-EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 +PLIV ITEGIPV DMV+V L ++ ++R+IGPNCPGI++P CKIGIMPG I ++G Sbjct: 65 ALPLIVAITEGIPVADMVKVNEYLGDRPATRMIGPNCPGIISPGKCKIGIMPGHIHKEGR 124 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 +G++SRSGTLTYEAV Q + GLGQSTA+GIGGDP+ GT D L LF AD+ T++IVM+ Sbjct: 125 IGVVSRSGTLTYEAVGQLTALGLGQSTAIGIGGDPIIGTTHTDALRLFQADDETDAIVMI 184 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 GEIGG+AEE+AA F KD KPIV F+AG+TAPPGR MGHAGA+ISGGKG A +K+ Sbjct: 185 GEIGGTAEEDAAAFAKDNV----TKPIVAFIAGQTAPPGRRMGHAGAIISGGKGTAAEKM 240 Query: 273 NAMKEAGICIAPSPARIGRSLVELLGS 299 A+++AGI + SPA IG ++ E+LG+ Sbjct: 241 AALRDAGIHVVESPADIGAAVQEVLGA 267 >gi|213962729|ref|ZP_03390990.1| succinate-CoA ligase, alpha subunit subfamily [Capnocytophaga sputigena Capno] gi|213954724|gb|EEB66045.1| succinate-CoA ligase, alpha subunit subfamily [Capnocytophaga sputigena Capno] Length = 291 Score = 291 bits (746), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 159/297 (53%), Positives = 212/297 (71%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K++VQG TG GTFH EQ I Y T +VGGI P KG G PVF Sbjct: 1 MSVLVNKNSKIIVQGFTGSEGTFHAEQMIAY-GTNIVGGITPNKGGQTHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DMV+V A ++ Sbjct: 56 TVADAVKATGADVSIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMVKVAAYIKNR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP+ K+GIMPG IF+KG+VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 ECRLVGPNCPGVITPEEAKVGIMPGFIFKKGNVGIVSKSGTLTYEAADQIVRQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D T IVM+GEIGG E EAA+++K G +KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETHCIVMIGEIGGQLEPEAARWIK---ANGNQKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAP GRTMGHAGA++ G AE K ++E GI + SPA+IG + E+L Sbjct: 233 SFIAGETAPKGRTMGHAGAIVGGADDTAEAKKRILRECGIHVVDSPAKIGEKVAEIL 289 >gi|71908975|ref|YP_286562.1| succinyl-CoA synthetase subunit alpha [Dechloromonas aromatica RCB] gi|71848596|gb|AAZ48092.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Dechloromonas aromatica RCB] Length = 297 Score = 291 bits (746), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 150/306 (49%), Positives = 211/306 (68%), Gaps = 18/306 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKK-GSTYWTGGNVNVP 57 MSI ++KNT+++ QG+TGK G FHTE+ Y + V G++PKK G + + N+P Sbjct: 1 MSIFINKNTRIITQGITGKTGQFHTEKCQEYANGKECFVAGVNPKKAGESIF-----NIP 55 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 ++ +V EA T A SVIYVPP GA AI E++EA++ + +CITEGIPV DM+ ++ ++ Sbjct: 56 IYASVKEAAAETGATVSVIYVPPPGAAAAIWEAVEADLDMAICITEGIPVRDMLMLRNKM 115 Query: 118 EKSS------SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 ++ + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + Sbjct: 116 KEKEAKGGKKTLLLGPNCPGLITPDEVKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLT 175 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + GLGQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAA + K+ Sbjct: 176 EIGLGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAAMWCKEN- 234 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 KKPIVGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+ G + +P+ + + Sbjct: 235 ---MKKPIVGFIAGVTAPAGKRMGHAGALISGGADTADAKLEIMEACGFTVTRNPSEMAK 291 Query: 292 SLVELL 297 L LL Sbjct: 292 LLKALL 297 >gi|146418184|ref|XP_001485058.1| hypothetical protein PGUG_02787 [Meyerozyma guilliermondii ATCC 6260] Length = 404 Score = 291 bits (746), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 222/298 (74%), Gaps = 10/298 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFT 60 ++ V+ +TKV+ QG TG+ GTFH EQAI Y T++VGG +PKK GST+ ++ PVF Sbjct: 105 NLKVNLDTKVIYQGFTGRQGTFHAEQAIAY-GTKIVGGTNPKKAGSTH-----LDRPVFA 158 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 V++A + T ANA+ I+VPPS A AI E+IEAEI L V ITEGIP DMVR+ L+ + Sbjct: 159 NVSDAIKETGANATAIFVPPSIAAAAIEEAIEAEIELAVAITEGIPQHDMVRIAQMLKTQ 218 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S +RL+GPNCPG++ PD CKIGIMP I ++G VG++SRSGTLTYEAV QT+ GLGQS Sbjct: 219 SKTRLVGPNCPGLIAPDQCKIGIMPSHIHQRGKVGVISRSGTLTYEAVAQTTGVGLGQSL 278 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE--AKRGRKK 237 +G+GGDP GT FID L LFL D+ TE I+++GEIGG+AEEEA++FLK + K Sbjct: 279 VIGMGGDPFPGTNFIDALTLFLEDKETEGIILIGEIGGTAEEEASEFLKQHNLTRPDGPK 338 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 P+V F+AG +APPGR MGHAGA+ISGGKG A+ KI A++ AG+ + SPAR+G SL+E Sbjct: 339 PVVSFIAGVSAPPGRRMGHAGAIISGGKGDAKSKIAALESAGVVVERSPARLGNSLLE 396 >gi|222053862|ref|YP_002536224.1| succinyl-CoA synthetase, alpha subunit [Geobacter sp. FRC-32] gi|221563151|gb|ACM19123.1| succinyl-CoA synthetase, alpha subunit [Geobacter sp. FRC-32] Length = 298 Score = 291 bits (746), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 164/298 (55%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K++K+LVQG+TG++G FHT+Q Y +++V G+ P KG + G +PVF Sbjct: 1 MSILLNKDSKILVQGITGRSGLFHTQQCRDY-GSRIVAGVTPGKGGIHIEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T AN S+I+VPP A DAI+E+ +A + L VCITEGIPV DMV + LE Sbjct: 56 TVEEAVHYTQANVSMIFVPPPAAADAILEAADAGMDLAVCITEGIPVRDMVLARRVLESK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TPD CK+GIMPG I +KG +G++SRSGTLTYEAV Q + GLGQST Sbjct: 116 KMRLVGPNCPGVITPDECKVGIMPGHIHKKGKIGVVSRSGTLTYEAVKQLTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G +FIDVL+LF D AT+ + M+GEIGG AEEEAA+++K+ KKP+ Sbjct: 176 VGIGGDPIIGMKFIDVLQLFNEDPATDGVFMIGEIGGGAEEEAAEWIKENM----KKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPG+ MGHAGA+I+GGKG AEDKI ++E G+ ++ SP ++G ++ ++G Sbjct: 232 AFIAGITAPPGKRMGHAGAIITGGKGRAEDKIQVLRECGVTVSTSPTQMGETMQAVMG 289 >gi|332526157|ref|ZP_08402292.1| succinyl-CoA synthetase subunit alpha [Rubrivivax benzoatilyticus JA2] gi|332109997|gb|EGJ10625.1| succinyl-CoA synthetase subunit alpha [Rubrivivax benzoatilyticus JA2] Length = 297 Score = 291 bits (746), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 152/305 (49%), Positives = 212/305 (69%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+T+V+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTRVITQGITGKTGQFHTHMCRDYANGRNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EA +T A SVIYVPP+GA AI E++EAE+ L +CITEGIP+ DM+ V+ R++ Sbjct: 57 YASVKEAAAQTGATVSVIYVPPAGAAAAIWEAVEAELDLAICITEGIPIKDMLEVRNRMK 116 Query: 119 KS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG +TP+ KIGIMPG I +KG +G++SRSGTLTYEAV Q S+ Sbjct: 117 AKEAAGGKKTLLLGPNCPGTITPEEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVAQLSE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+GQS+AVGIGGDP+ G + IDV+ LF D T++++M+GEIGG E +AA++ K+ Sbjct: 177 LGIGQSSAVGIGGDPINGLKHIDVMRLFNEDPDTDAVIMIGEIGGPDEADAARWCKEHM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKP+VGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G I +P+ +GR Sbjct: 236 ---KKPVVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFTITRNPSEMGRL 292 Query: 293 LVELL 297 L +L+ Sbjct: 293 LQKLI 297 >gi|298208207|ref|YP_003716386.1| succinyl-CoA synthase, alpha subunit [Croceibacter atlanticus HTCC2559] gi|83848128|gb|EAP85998.1| succinyl-CoA synthase, alpha subunit [Croceibacter atlanticus HTCC2559] Length = 290 Score = 291 bits (745), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 158/298 (53%), Positives = 215/298 (72%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG +++ PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIEYG-TNVVGGVTPGKGGQT----HLDKPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + A+ S+I+VPP+ A DAI+E+ EA I +I+CITEGIPV DM+ VK +E Sbjct: 56 TVDEAVKEAKADTSIIFVPPAFAADAIMEAAEAGIKVIICITEGIPVKDMITVKNYIENK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG +F+KG+VGI+S+SGTLTYEA Q ++ LG +TA Sbjct: 116 DVRLIGPNCPGVITPGEAKVGIMPGFVFKKGNVGIVSKSGTLTYEAADQVVKQNLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +E+ + D+ T+ IVM+GEIGG E +AA++ K+ G KKPIV Sbjct: 176 IGIGGDPIIGTTTKEAVEMLINDDETDCIVMIGEIGGQLEADAAKWYKE---SGSKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + A+ K +KE+GI + SPA IG+ + E+LG Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSEDTAQAKKKILKESGIHVVDSPAEIGKKVAEVLG 290 >gi|261350921|ref|ZP_05976338.1| succinyl-CoA synthetase subunit alpha [Methanobrevibacter smithii DSM 2374] gi|288860259|gb|EFC92557.1| succinyl-CoA synthetase subunit alpha [Methanobrevibacter smithii DSM 2374] Length = 286 Score = 291 bits (745), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 148/287 (51%), Positives = 202/287 (70%), Gaps = 10/287 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D +TK LVQG+TGK G+FHTEQ + Y T ++ G+ P KG + G VPVF ++ Sbjct: 2 ILLDNDTKCLVQGITGKQGSFHTEQMLEY-NTNILAGVTPGKGGQDFLG----VPVFNSI 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EAKE T N+S+I+VP A DA ESI + L+V I+E IPV D +++ + + Sbjct: 57 EEAKEETGVNSSIIFVPAKFAKDAAFESIR-HLDLVVIISEHIPVHDSLKIMNYAREMDT 115 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PGI+TP K+GIMP IF +G+VG++SRSGTLTYE Q ++ G+GQST VG Sbjct: 116 TVIGPNTPGIITPGVGKLGIMPTHIFEEGNVGVISRSGTLTYEVASQLTRGGIGQSTCVG 175 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT +ID+L+ F D+ TE+IV++GEIGG+AEE AA+F+K+ KP+V + Sbjct: 176 IGGDPVIGTNYIDILKKFEEDDDTEAIVLIGEIGGNAEENAAEFIKNNI----SKPVVSY 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +AG+TAPPG+ MGHAGA+I G G AE KINA+ +AG+ +A P+ I Sbjct: 232 IAGRTAPPGKRMGHAGAIIHGSSGTAESKINALTDAGVSVAKMPSEI 278 >gi|312130295|ref|YP_003997635.1| succinyl-CoA synthetase, alpha subunit [Leadbetterella byssophila DSM 17132] gi|311906841|gb|ADQ17282.1| succinyl-CoA synthetase, alpha subunit [Leadbetterella byssophila DSM 17132] Length = 291 Score = 291 bits (745), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 162/298 (54%), Positives = 212/298 (71%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KN+KV+VQG TG GTFH Q I Y T VVGG+ P KG +++ PVF Sbjct: 1 MSILVNKNSKVIVQGFTGSEGTFHAGQMIEY-GTNVVGGVTPGKGGQT----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A+ S+I+VPP A DAI+E+ +A I +IVCITEGIP DMV+ K+ + Sbjct: 56 TVEEAVKETGADVSIIFVPPGFAADAIMEAAQAGIKVIVCITEGIPTKDMVKAKSFISTY 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPGI+T + K+GIMPG IF+KG++G++S+SGTLTYEAV Q ++ GLGQSTA Sbjct: 116 DCTLIGPNCPGIITAEEAKVGIMPGFIFKKGTIGVVSKSGTLTYEAVDQLTKVGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT +E+ + D TE IVM+GEIGG E EAA+++K+ G KKP+V Sbjct: 176 IGIGGDPIIGTTTKQAVEMLMNDPETEGIVMIGEIGGGMEAEAARYIKE---TGNKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GR MGHAGA+I G A K+ M+E GI + SPA IG ++++ LG Sbjct: 233 GFIAGQTAPKGRRMGHAGAIIGGADDTAAAKMAIMRECGIHVVDSPAEIGETMLKALG 290 >gi|327405863|ref|YP_004346701.1| succinyl-CoA synthetase subunit alpha [Fluviicola taffensis DSM 16823] gi|327321371|gb|AEA45863.1| succinyl-CoA synthetase, alpha subunit [Fluviicola taffensis DSM 16823] Length = 292 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 162/298 (54%), Positives = 214/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+KV+VQG TG GTFH Q I Y T VVGG+ P KG + +++ PVF Sbjct: 1 MSVLVNKNSKVIVQGFTGSEGTFHAGQMIEY-GTNVVGGVTPGKGGSS----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A +T A+ S+I+VPP+ A DAI+E+ A I +IVCITEGIPV DMV+ K L+ S Sbjct: 56 TVADAVAKTGADVSIIFVPPAFAADAIMEAANAGIKVIVCITEGIPVNDMVKAKEYLKGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++T K+GIMPG +F+KG +GI+S+SGTLTYEA Q ++ GLG +TA Sbjct: 116 GARLIGPNCPGVITAGEAKVGIMPGFVFKKGKIGIVSKSGTLTYEAADQVAKAGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE IVM+GEIGGS E AA+++K+ KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETEGIVMIGEIGGSLEAIAARWIKEHG----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G AE K M+E GI + SPA+IG + E+LG Sbjct: 232 GFIAGETAPKGRTMGHAGAIVGGDDDTAEAKKRIMRECGIHVVDSPAQIGAKMAEILG 289 >gi|53713545|ref|YP_099537.1| succinyl-CoA synthetase alpha chain [Bacteroides fragilis YCH46] gi|60681830|ref|YP_211974.1| succinyl-CoA synthetase alpha chain [Bacteroides fragilis NCTC 9343] gi|253565537|ref|ZP_04842992.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 3_2_5] gi|265763870|ref|ZP_06092438.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 2_1_16] gi|52216410|dbj|BAD49003.1| succinyl-CoA synthetase alpha chain [Bacteroides fragilis YCH46] gi|60493264|emb|CAH08048.1| succinyl-CoA synthetase alpha chain [Bacteroides fragilis NCTC 9343] gi|251945816|gb|EES86223.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 3_2_5] gi|263256478|gb|EEZ27824.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 2_1_16] gi|301163322|emb|CBW22872.1| succinyl-CoA synthetase alpha chain [Bacteroides fragilis 638R] Length = 289 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 147/289 (50%), Positives = 205/289 (70%), Gaps = 8/289 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T++LVQG+TG+ G FH ++ Y T VVGG P KG T + PVF Sbjct: 1 MSILIDKSTRLLVQGITGRDGLFHAKKMAEYG-TNVVGGTSPGKGGTMI---DDTFPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA RT AN SVI+VP A DAI+E+ +A I LI+CITEGIP LD+++ +E Sbjct: 57 TMHEAVRRTQANTSVIFVPARFAADAIMEAADAGIRLIICITEGIPTLDVIKAYRFVELK 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++LIGPNCPG+++P +GI+PG +F G++G++SRSGTLTYE V + +G+GQSTA Sbjct: 117 GAKLIGPNCPGLISPGESLVGILPGQVFTPGNIGVISRSGTLTYEIVSHLTAKGMGQSTA 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDPV G F D+L + D T++IVM+GEIGG+AEE AA ++++ KP+V Sbjct: 177 IGMGGDPVVGLYFRDLLGMLQNDPQTDAIVMIGEIGGNAEELAATYIREHV----TKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 F+AG++APPG+ MGHAGA+ISG G A +KI+A++ AGI +A P+ I Sbjct: 233 AFIAGRSAPPGKQMGHAGAIISGSSGSATEKISALEAAGIRVAGEPSEI 281 >gi|332526923|ref|ZP_08403016.1| succinyl-CoA synthetase subunit alpha [Rubrivivax benzoatilyticus JA2] gi|332111365|gb|EGJ11349.1| succinyl-CoA synthetase subunit alpha [Rubrivivax benzoatilyticus JA2] Length = 297 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 151/305 (49%), Positives = 212/305 (69%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+T+V+ QG+TGK G FHT Y Q V G++PKK + G +P+ Sbjct: 1 MSILINKDTRVITQGITGKTGQFHTRMCRDYANGQNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EA +T A SVIYVPP+GA AI E++EAE+ L +CITEGIP+ DM+ V+ +++ Sbjct: 57 YASVKEAAAQTGATVSVIYVPPAGAAAAIWEAVEAELDLAICITEGIPIKDMLEVRNKMK 116 Query: 119 KS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG +TP+ KIGIMPG I +KG +G++SRSGTLTYEAV Q S+ Sbjct: 117 AKEAAGGKKTLLLGPNCPGTITPEEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVAQLSE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+GQS+AVGIGGDP+ G + +DV+ LF D T++++M+GEIGG E +AA++ K+ Sbjct: 177 LGIGQSSAVGIGGDPINGLKHLDVMRLFNEDPDTDAVIMIGEIGGPDEADAARWCKEHM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKP+VGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G I +P+ +GR Sbjct: 236 ---KKPVVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFTITRNPSEMGRL 292 Query: 293 LVELL 297 L +L+ Sbjct: 293 LQKLI 297 >gi|11499767|ref|NP_071010.1| succinyl-CoA synthetase, alpha subunit (sucD-2) [Archaeoglobus fulgidus DSM 4304] gi|6647837|sp|O28098|SUCD2_ARCFU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha 2; AltName: Full=Succinyl-CoA synthetase subunit alpha 2; Short=SCS-alpha 2 gi|2648340|gb|AAB89067.1| succinyl-CoA synthetase, alpha subunit (sucD-2) [Archaeoglobus fulgidus DSM 4304] Length = 287 Score = 290 bits (743), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 151/297 (50%), Positives = 212/297 (71%), Gaps = 10/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I+VD+ TKV+VQG+TG G FHTE+ + Y T++V G+ P KG T G VPV+ Sbjct: 1 MAIIVDERTKVVVQGITGYQGKFHTERMLNYG-TKIVAGVTPGKGGTEVLG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA ANASVI+VP A DA++E+ +A I +IVCITEGIPV D +++ R++++ Sbjct: 56 SVKEAVREADANASVIFVPAPFAADAVMEAADAGIKVIVCITEGIPVHDELKMYWRVKEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPGI++P +GIMP IF+ G+VGI+SRSGTLTY+ + ++ GLGQST Sbjct: 116 GATLIGPNCPGIISPGKTHLGIMPVQIFKPGNVGIVSRSGTLTYQIAYNLTKLGLGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGD + GT+F++VL LF D+ T+++V+VGEIGG EE AA+F+++ + KP+V Sbjct: 176 VGIGGDRIIGTDFVEVLRLFEDDKETKAVVLVGEIGGRDEEVAAEFIREMS-----KPVV 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G+VAG TAPPG+ MGHAGA+I GG G AE KI A++ AG + +P + + E+L Sbjct: 231 GYVAGLTAPPGKRMGHAGAIIEGGVGTAESKIKALEAAGARVGKTPMEVAELVAEIL 287 >gi|121596330|ref|YP_988226.1| succinyl-CoA synthetase subunit alpha [Acidovorax sp. JS42] gi|120608410|gb|ABM44150.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Acidovorax sp. JS42] Length = 297 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 154/305 (50%), Positives = 211/305 (69%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+TKV+ QG+TGK G FHTE+ Y + V G++PKK ++P+ Sbjct: 1 MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGEKI----FDIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V +A + T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ +++ Sbjct: 57 FGSVKDAAKETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMK 116 Query: 119 KSSSR------LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TPD KIGIMPG I +KG VG++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKRTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRVGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+GQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAA++ K Sbjct: 177 LGIGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAARW----CK 232 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G I +P+ + R Sbjct: 233 ANMKKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFTITRNPSEMARL 292 Query: 293 LVELL 297 L LL Sbjct: 293 LKGLL 297 >gi|86148932|ref|ZP_01067164.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|85840290|gb|EAQ57547.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni CF93-6] Length = 289 Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 155/298 (52%), Positives = 200/298 (67%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y T +VGG+ P KG G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTNIVGGVTPHKGGQTHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+AS+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVADAVKATKADASLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T + CK+GIMPG IF+KG VG++S+SGTLTYEA Q Q G G STA Sbjct: 116 GMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVVQGGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D+ T++IVM+GEIGGS E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFQKDDETKAIVMIGEIGGSLEVEAAKFIKENI----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++LG Sbjct: 232 AFIAGATAPKGKRMGHAGAIVGSADESAAAKKEALKSYGIHVVDSPALIGEEIQKILG 289 >gi|260910326|ref|ZP_05917000.1| succinyl-CoA synthetase subunit alpha [Prevotella sp. oral taxon 472 str. F0295] gi|260635578|gb|EEX53594.1| succinyl-CoA synthetase subunit alpha [Prevotella sp. oral taxon 472 str. F0295] Length = 292 Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 144/289 (49%), Positives = 203/289 (70%), Gaps = 9/289 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNT+++VQG+TG+ G FH + Y T VVGG P K +G +PVF Sbjct: 1 MSILINKNTRLIVQGITGRDGGFHATKMKAYG-TNVVGGTSPGKAGQEVSG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T AN SVI+VP + A DA++E+ +A I LI+CITEG+P LD+V+ + + Sbjct: 56 TVRDAVEATQANTSVIFVPAAFAKDAMMEAADAGIQLIICITEGVPTLDVVQAYNYIRQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++LIGPNCPG+++P+ +GIMP +IF+KG G++SRSGTLTYE V+ +Q G+GQSTA Sbjct: 116 GAKLIGPNCPGLISPEESMVGIMPTNIFKKGGTGVISRSGTLTYEVVYNLTQNGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ G F D+LE+F D AT+SI ++GEIGG AEE AA+++K KP+ Sbjct: 176 VGVGGDPIVGLYFQDLLEMFENDPATDSIAIIGEIGGDAEERAAEYIKAHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 F++G+ AP G+ MGHAGA+IS G G A++K+ A + AGI +A + I Sbjct: 232 AFISGREAPKGKQMGHAGAIISSGSGTAKEKVAAFEAAGIPVARETSEI 280 >gi|89902703|ref|YP_525174.1| succinyl-CoA synthetase subunit alpha [Rhodoferax ferrireducens T118] gi|89347440|gb|ABD71643.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodoferax ferrireducens T118] Length = 297 Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 152/305 (49%), Positives = 209/305 (68%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHTE+ Y + V G++PKK ++P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGEKI----FDIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V EA +T A SVIYVPP+GA AI E++EA++ L +CITEGIP+ DM+ V+ ++ Sbjct: 57 FASVKEAASQTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPIRDMLEVRNKMR 116 Query: 119 KS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TPD KIGIMP I RKG +G++SRSGTLTYEAV Q ++ Sbjct: 117 AKVAAGGKETLLLGPNCPGLITPDEIKIGIMPAHIHRKGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + ID++ LF D T++++M+GEIGG E +AA++ K Sbjct: 177 IGLGQSSAVGIGGDPINGLKHIDIMRLFNDDPDTDAVIMIGEIGGPDEADAARW----CK 232 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAP G+ MGHAGA+ISGG AE K+ M+E G I +P+ + + Sbjct: 233 ANMKKPIVGFIAGVTAPAGKRMGHAGALISGGGDTAEAKLAVMEECGFKITRNPSELAKL 292 Query: 293 LVELL 297 L +L Sbjct: 293 LKAML 297 >gi|315638489|ref|ZP_07893666.1| succinyl-CoA synthetase subunit alpha [Campylobacter upsaliensis JV21] gi|315481480|gb|EFU72107.1| succinyl-CoA synthetase subunit alpha [Campylobacter upsaliensis JV21] Length = 289 Score = 289 bits (740), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 155/297 (52%), Positives = 199/297 (67%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y TQ+VGG+ P KG T G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTQIVGGVTPFKGGTEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA + T A+ S+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVSEAVKATGADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T CK+GIMPG IF+KG VG++S+SGTLTYEA Q +Q G G STA Sbjct: 116 GMKIIGPNCPGIITSQECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVAQSGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D T++IVM+GEIGGS E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFEKDAETKAIVMIGEIGGSLEVEAAKFIKENI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++L Sbjct: 232 AFIAGATAPKGKRMGHAGAIVGSSDESAAAKKEALKSYGIHVVDSPALIGEEIKKIL 288 >gi|255730485|ref|XP_002550167.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240132124|gb|EER31682.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 323 Score = 289 bits (740), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 168/295 (56%), Positives = 218/295 (73%), Gaps = 8/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK TFH EQAI Y TQVVGGI+P+K T +++ PVF T Sbjct: 24 NLKINSDTKVIYQGFTGKQATFHAEQAIAYG-TQVVGGINPRKAGTT----HLDRPVFGT 78 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + A A+ I+VPP A AI E+I AEIPL V ITEGIP DMVR+ L+ + Sbjct: 79 VAEAMKEAGATATGIFVPPPLAAAAIEEAITAEIPLAVAITEGIPQKDMVRIAQILKTQD 138 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG+++PD CKIGIMP I ++G VGI+SRSGTLTYEAV QT+ GLGQS Sbjct: 139 KTRLVGPNCPGVISPDQCKIGIMPSQIHQRGKVGIISRSGTLTYEAVAQTTAVGLGQSLV 198 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK--DEAKRGRKKP 238 +G+GGDP GT FID L LFL D+ TE I+++GEIGGSAEEEA++FLK + + KP Sbjct: 199 IGMGGDPFPGTNFIDALTLFLNDKETEGIILIGEIGGSAEEEASEFLKQYNLTRPEGPKP 258 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 +V F+AG +APPGR MGHAGA+++GGKG A+ KI A++ AG+ + SPAR+G+SL Sbjct: 259 VVSFIAGVSAPPGRRMGHAGAIVAGGKGDAKSKIAALESAGVVVEKSPARLGKSL 313 >gi|163755589|ref|ZP_02162708.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [Kordia algicida OT-1] gi|161324502|gb|EDP95832.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [Kordia algicida OT-1] Length = 290 Score = 289 bits (740), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 156/298 (52%), Positives = 214/298 (71%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG +++ PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIEY-GTNVVGGVTPGKGGQT----HLDKPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA E+ A+ ++I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DM +V A + Sbjct: 56 TVSEAVEKVGADTTIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMTKVAAYISDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP K+GIMPG +F++G VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLVGPNCPGVITPGEAKVGIMPGFVFKEGKVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + DEATE +VM+GEIGG E +AA++ K+ G KKP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLINDEATECVVMIGEIGGQLEADAAKWYKE---SGSKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G AE K M+E GI + SPA IG+ + E++G Sbjct: 233 GFIAGETAPKGRTMGHAGAIVGGADDTAEAKKRIMRECGIHVVDSPAEIGKKVAEVVG 290 >gi|311748277|ref|ZP_07722062.1| succinyl-CoA synthase, alpha subunit [Algoriphagus sp. PR1] gi|126576772|gb|EAZ81020.1| succinyl-CoA synthase, alpha subunit [Algoriphagus sp. PR1] Length = 293 Score = 289 bits (740), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 156/298 (52%), Positives = 216/298 (72%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+KV+VQG TG G+FH +Q I Y T VVGG+ P KG + ++ PVF Sbjct: 1 MSVLVNKNSKVIVQGFTGSEGSFHAQQMIEYG-TNVVGGVTPGKGGST----HLEKPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA + T A+ S+I+VPP+ A DAI+E+ EA I +I+ ITEGIPV DM++ K + + Sbjct: 56 SVEEAVQTTGADTSIIFVPPAFAADAIMEAAEAGIKVIIAITEGIPVADMMKAKPYIIER 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG++TP K+GIMPG +F++G +GI+S+SGTLTYEA Q ++ GLG STA Sbjct: 116 GATLIGPNCPGVITPGEAKVGIMPGFVFKQGRIGIVSKSGTLTYEAADQVAKAGLGVSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ++L + D T++IVM+GEIGG+ E EAA+++++ G KKP+V Sbjct: 176 IGIGGDPIIGTSTKQAVQLLMEDPETDAIVMIGEIGGNYEAEAAKWIRE---TGNKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+I G AE K+ M+E GI +A SPA IG ++ + LG Sbjct: 233 GFIAGQTAPPGRRMGHAGAIIGGADDTAEAKMRIMRENGIHVADSPAEIGATMAKALG 290 >gi|57242652|ref|ZP_00370589.1| SucD [Campylobacter upsaliensis RM3195] gi|57016581|gb|EAL53365.1| SucD [Campylobacter upsaliensis RM3195] Length = 289 Score = 289 bits (740), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 155/297 (52%), Positives = 199/297 (67%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y TQ+VGG+ P KG T G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTQIVGGVTPFKGGTEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA + T A+ S+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVSEAIKATGADMSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T CK+GIMPG IF+KG VG++S+SGTLTYEA Q +Q G G STA Sbjct: 116 GMKIIGPNCPGIITSQECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVAQSGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D T++IVM+GEIGGS E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFEKDAETKAIVMIGEIGGSLEVEAAKFIKENI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++L Sbjct: 232 AFIAGATAPKGKRMGHAGAIVGSSDESAAAKKEALKSYGIHVVDSPALIGEEIKKIL 288 >gi|320581273|gb|EFW95494.1| succinate-CoA ligase [Pichia angusta DL-1] Length = 319 Score = 289 bits (739), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 166/296 (56%), Positives = 213/296 (71%), Gaps = 7/296 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+ QG TG+ TFH EQA+ Y T++VGG +PKK G PVF + Sbjct: 21 NLKINKDTKVIYQGFTGRQATFHAEQALAYG-TKIVGGTNPKKAGQTHLGK----PVFAS 75 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VA+A + T A AS I+VPP A AI E++ AEIPL+V ITEGIP DM+RV L +S Sbjct: 76 VADAIKETGATASGIFVPPPIAASAIEEAVAAEIPLVVAITEGIPQADMLRVSQLLRTQS 135 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P+ CKIGIMP +I +KG +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 136 KTRLVGPNCPGIIAPEQCKIGIMPQNIHKKGRIGIVSRSGTLTYEAVNQTTKVGLGQSLV 195 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKPI 239 +G+GGDP GT FID L LFL D TE I+++GEIGG AEEEAA++LK R KP+ Sbjct: 196 IGMGGDPCPGTNFIDALTLFLNDPETEGIILIGEIGGEAEEEAAEYLKQYNLTRDVPKPV 255 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 V F+AG TAPPGR MGHAGA+ISGGKG A+ KI A+ A + PSP R+G++L + Sbjct: 256 VSFIAGVTAPPGRRMGHAGALISGGKGTAKSKIEALTAAEAVVVPSPGRLGKALYD 311 >gi|285017466|ref|YP_003375177.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit protein [Xanthomonas albilineans GPE PC73] gi|283472684|emb|CBA15189.1| probable succinyl-coa synthetase, nad(p)-binding, alpha subunit protein [Xanthomonas albilineans] Length = 290 Score = 289 bits (739), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 213/298 (71%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K TKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG + G +PVF Sbjct: 1 MSVLINKKTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGSTHIG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L++ Sbjct: 56 TVREAVQATGADASVIYVPPPFAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLKQH 115 Query: 121 SSR-LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 L+GPNCPGI+TP CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PDVVLVGPNCPGIITPGECKIGIMPGHIHQKGKIGIVSRSGTLTYEAVKQTTAAGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G F+D L+LF D TE I+MVGEIGG+AEE A ++K KKP+ Sbjct: 176 VIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGAAEEAGAAYIKQHV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG +AP G+ MGHAGA+ SGG G AE K AM+ AG+ SP +G ++ L+ Sbjct: 232 VGFIAGASAPKGKRMGHAGAIASGGSGTAEGKFAAMEAAGVKTVRSPGDLGAAIASLV 289 >gi|327274280|ref|XP_003221906.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial-like [Anolis carolinensis] Length = 328 Score = 288 bits (738), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 173/295 (58%), Positives = 226/295 (76%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + K+TKV+ QG TGK GTFH++QA+ Y T +VGGI P KG G +PVF + Sbjct: 31 NLYITKDTKVICQGFTGKQGTFHSQQALEY-GTNLVGGISPGKGGKTHLG----LPVFNS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V+EA +T A+ASVIYVPP+ A AI E+I+AEI L+VCITEGIP DMVRVK RL ++ Sbjct: 86 VSEAIAKTGASASVIYVPPAFAAAAINEAIDAEISLVVCITEGIPQQDMVRVKHRLLRQN 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RL+GPNCPG++ P CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 146 NTRLVGPNCPGVINPGECKIGIMPGHIHKKGRVGIVSRSGTLTYEAVHQTTQVGLGQSFC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID LE+FL D TE I+++GEIGG+AEE+AA++L+ KP+V Sbjct: 206 VGIGGDPFNGTNFIDCLEVFLKDPHTEGIILIGEIGGNAEEDAAEYLRKNNSGQDSKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 266 SFIAGVTAPPGRRMGHAGAIIAGGKGGAKEKIMALQNAGVIVSMSPAQLGSTIYK 320 >gi|218562186|ref|YP_002343965.1| succinyl-coA synthetase alpha chain [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|112359892|emb|CAL34680.1| succinyl-coA synthetase alpha chain [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 289 Score = 288 bits (738), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 155/298 (52%), Positives = 199/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y T +VGGI P KG G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTNIVGGITPHKGGQTHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T + CK+GIMPG IF+KG VG++S+SGTLTYEA Q Q G G STA Sbjct: 116 GMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVVQGGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D+ T++IVM+GEIGGS E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFQKDDETKAIVMIGEIGGSLEVEAAKFIKENI----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++LG Sbjct: 232 AFIAGATAPKGKRMGHAGAIVGSADESAAAKKEALKSYGIHVVDSPALIGEEIQKILG 289 >gi|295134220|ref|YP_003584896.1| succinyl-CoA ligase subunit alpha [Zunongwangia profunda SM-A87] gi|294982235|gb|ADF52700.1| succinyl-CoA ligase subunit alpha [Zunongwangia profunda SM-A87] Length = 290 Score = 288 bits (738), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 153/298 (51%), Positives = 218/298 (73%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH EQ I Y + VVGG+ P KG +++ PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAEQMIEYG-SNVVGGVTPGKGGQK----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A + T A+ ++I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DMV+ ++ Sbjct: 56 TVSDAVKETGADVTIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMVKASNYIKNK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG +F+KG+VGI+S+SGTLTYEA Q +EGLG +TA Sbjct: 116 DCRLIGPNCPGVITPGEAKVGIMPGFVFKKGTVGIVSKSGTLTYEAADQVVKEGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D+ T++IVM+GEIGG E +AA+++K+ G KKP++ Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDDETKAIVMIGEIGGQLEADAAKWIKE---NGNKKPVI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + A+ K +KE G+ + SPA IG+ + E+LG Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSEDTAQAKKAILKENGVHVVDSPAEIGKKVAEVLG 290 >gi|220672696|emb|CAX13903.1| succinate-CoA ligase, GDP-forming, alpha subunit [Danio rerio] gi|220679279|emb|CAX13849.1| succinate-CoA ligase, GDP-forming, alpha subunit [Danio rerio] Length = 324 Score = 288 bits (738), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 172/295 (58%), Positives = 224/295 (75%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++KNTKV+ QG TGK GTFH++Q++ Y +Q+VGG+ P KG G +PVF + Sbjct: 27 NLYINKNTKVICQGFTGKQGTFHSQQSLDY-GSQLVGGVSPGKGGKTHLG----LPVFNS 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAK+ T A A+VIYVPP A AIIE+I+AE+PL VCITEGIP DMVRVK RL ++ Sbjct: 82 VKEAKDGTGAEATVIYVPPPFAAAAIIEAIDAEMPLAVCITEGIPQQDMVRVKHRLLRQN 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 142 KTRLVGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D TE I+++GEIGG AEE AA++LK KP+V Sbjct: 202 IGIGGDPFNGTNFIDCLEVFLQDPKTEGIILIGEIGGDAEENAAEYLKQHNSGANAKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 262 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTIFK 316 >gi|19115142|ref|NP_594230.1| succinate-CoA ligase alpha subunit [Schizosaccharomyces pombe 972h-] gi|3183164|sp|O13750|SUCA_SCHPO RecName: Full=Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor gi|2330705|emb|CAB11045.1| succinate-CoA ligase alpha subunit [Schizosaccharomyces pombe] Length = 331 Score = 288 bits (737), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 167/301 (55%), Positives = 215/301 (71%), Gaps = 7/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +++++ +TKV+ QG TGK GTFH + A+ Y T+VVGG +PKK T G PVF T Sbjct: 34 NLMINSDTKVIFQGFTGKQGTFHAQHAMDYG-TKVVGGTNPKKAGTTHLGK----PVFGT 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 + EA + T A+AS ++VPP A AI E+I AE+PLIV ITEGIP DM+RV L+ +S Sbjct: 89 IEEAMKETKADASAVFVPPPLAAGAIEEAIAAEVPLIVAITEGIPQHDMLRVSDILKTQS 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P CKIGIMP I + G +GI+SRSGTLTYEAV QT+Q LGQS Sbjct: 149 KSRLVGPNCPGIIRPGQCKIGIMPSHIHKPGCIGIVSRSGTLTYEAVNQTTQTDLGQSLV 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK-DEAKRGRKKPI 239 +GIGGDP GT FID L+LFL D T+ I+++GEIGGSAEE+AA+F++ A R KP+ Sbjct: 209 IGIGGDPFPGTNFIDALKLFLDDPNTQGIILIGEIGGSAEEDAAEFIRAANASRSTPKPV 268 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V F+AG TAP GR MGHAGA+++GGKG A K A++ AG+ I+ SPA +G +VE L Sbjct: 269 VSFIAGATAPKGRRMGHAGAIVAGGKGTAAAKFEALEAAGVRISRSPATLGSLIVEELNK 328 Query: 300 L 300 L Sbjct: 329 L 329 >gi|205355390|ref|ZP_03222161.1| succinyl-CoA synthetase alpha chain [Campylobacter jejuni subsp. jejuni CG8421] gi|205346624|gb|EDZ33256.1| succinyl-CoA synthetase alpha chain [Campylobacter jejuni subsp. jejuni CG8421] Length = 289 Score = 288 bits (737), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 154/298 (51%), Positives = 199/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y T +VGG+ P KG G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTNIVGGVTPHKGGQTHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T + CK+GIMPG IF+KG VG++S+SGTLTYEA Q Q G G STA Sbjct: 116 GMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVVQGGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D+ T++IVM+GEIGGS E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFQKDDETKAIVMIGEIGGSLEVEAAKFIKENI----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++LG Sbjct: 232 AFIAGATAPKGKKMGHAGAIVGSADESAAAKKEALKSYGIHVVDSPALIGEEIQKILG 289 >gi|119899621|ref|YP_934834.1| succinyl-CoA synthetase subunit alpha [Azoarcus sp. BH72] gi|119672034|emb|CAL95948.1| probable succinyl-CoA synthetase, alpha chain [Azoarcus sp. BH72] Length = 297 Score = 288 bits (737), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 152/305 (49%), Positives = 209/305 (68%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+TKV+ QG+TGK G FHTE+ Y + V G++PKK ++P+ Sbjct: 1 MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGERI----FDIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EA T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ +++ Sbjct: 57 YASVKEAASETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMK 116 Query: 119 KS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAA + K Sbjct: 177 LGLGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAALW----CK 232 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKP+VGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G + +P+ +G+ Sbjct: 233 ANMKKPVVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFKVTRNPSEMGKL 292 Query: 293 LVELL 297 L LL Sbjct: 293 LKSLL 297 >gi|194220542|ref|XP_001497635.2| PREDICTED: similar to Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) [Equus caballus] Length = 391 Score = 288 bits (737), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 177/295 (60%), Positives = 223/295 (75%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 + +DKNTKV+ QG TGK GTFH++QA+ Y TQ+VG ++ +PVF T Sbjct: 94 HLYIDKNTKVICQGFTGKQGTFHSQQALEY-GTQLVG----GTTPGKGGKTHLGLPVFNT 148 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A ASVIYVPP A AI E+IEAE+ L+VCITEGIP DMVRVK RL + Sbjct: 149 VKEAKEQTGATASVIYVPPPFAAAAINEAIEAEVSLVVCITEGIPQQDMVRVKHRLLRQG 208 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++ P CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 209 KTRLIGPNCPGVINPGECKIGIMPGHIHKKGRVGIVSRSGTLTYEAVHQTTQVGLGQSLC 268 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 269 VGIGGDPFNGTDFIDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKAKPVV 328 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 329 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQNAGVVVSMSPAQLGTTIYK 383 >gi|319796537|ref|YP_004158177.1| succinyL-CoA synthetase, alpha subunit [Variovorax paradoxus EPS] gi|315599000|gb|ADU40066.1| succinyl-CoA synthetase, alpha subunit [Variovorax paradoxus EPS] Length = 297 Score = 288 bits (737), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 151/302 (50%), Positives = 212/302 (70%), Gaps = 18/302 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKK-GSTYWTGGNVNVP 57 MSI ++K+TKV+ QG+TGK G FHTE+ Y + V G++PKK G + + N+P Sbjct: 1 MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKNAFVAGVNPKKAGESIF-----NIP 55 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 +F +V EA +T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ ++ Sbjct: 56 IFGSVKEAASQTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKM 115 Query: 118 EKS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + Sbjct: 116 KAKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLT 175 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + GLGQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E +AA++ K+ Sbjct: 176 EIGLGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEADAARWCKEH- 234 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 KKP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + + + + + Sbjct: 235 ---MKKPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFTVTRNFSELAK 291 Query: 292 SL 293 L Sbjct: 292 LL 293 >gi|57238266|ref|YP_178653.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni RM1221] gi|86151870|ref|ZP_01070084.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|86153373|ref|ZP_01071577.1| succinyl-CoA synthetase alpha chain [Campylobacter jejuni subsp. jejuni HB93-13] gi|88596905|ref|ZP_01100141.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|121613423|ref|YP_001000234.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|157414815|ref|YP_001482071.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 81116] gi|167005190|ref|ZP_02270948.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|283954178|ref|ZP_06371703.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 414] gi|315124058|ref|YP_004066062.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|57167070|gb|AAW35849.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni RM1221] gi|85841499|gb|EAQ58747.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|85843099|gb|EAQ60310.1| succinyl-CoA synthetase alpha chain [Campylobacter jejuni subsp. jejuni HB93-13] gi|87250024|gb|EAQ72982.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|88190594|gb|EAQ94567.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|157385779|gb|ABV52094.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 81116] gi|283794457|gb|EFC33201.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 414] gi|307747453|gb|ADN90723.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Campylobacter jejuni subsp. jejuni M1] gi|315017780|gb|ADT65873.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315057952|gb|ADT72281.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Campylobacter jejuni subsp. jejuni S3] gi|315927032|gb|EFV06387.1| Succinyl-CoA synthetase subunit alpha [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929567|gb|EFV08755.1| Succinyl-CoA ligase subunit alpha [Campylobacter jejuni subsp. jejuni 305] gi|315931728|gb|EFV10683.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Campylobacter jejuni subsp. jejuni 327] Length = 289 Score = 288 bits (737), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 154/298 (51%), Positives = 199/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y T +VGG+ P KG G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTNIVGGVTPHKGGQTHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T + CK+GIMPG IF+KG VG++S+SGTLTYEA Q Q G G STA Sbjct: 116 GMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVVQGGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D+ T++IVM+GEIGGS E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFQKDDETKAIVMIGEIGGSLEVEAAKFIKENI----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++LG Sbjct: 232 AFIAGATAPKGKRMGHAGAIVGSADESAAAKKEALKSYGIHVVDSPALIGEEIQKILG 289 >gi|288924930|ref|ZP_06418866.1| succinyl-CoA synthase, alpha subunit [Prevotella buccae D17] gi|288338120|gb|EFC76470.1| succinyl-CoA synthase, alpha subunit [Prevotella buccae D17] Length = 290 Score = 288 bits (737), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 146/289 (50%), Positives = 200/289 (69%), Gaps = 9/289 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNT+++VQG+TG+ G+FH + Y T VVGG P K +G +PVF Sbjct: 1 MSILINKNTRLIVQGITGRDGSFHATKMKEYG-TNVVGGTSPGKAGQEVSG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T AN SVI+VP A DA++E+ +A I LI+CITEG+P LD+V+ + + Sbjct: 56 TVRDAVEATQANTSVIFVPAPFAKDAMMEAADAGINLIICITEGVPTLDVVQAYNYIRQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P+ +GIMP IF+KG G++SRSGTLTYE V+ +Q GLGQSTA Sbjct: 116 GANLIGPNCPGLISPEESMVGIMPTGIFKKGRTGVISRSGTLTYEVVYNLTQSGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ G F D+LE+F D T+SI ++GEIGG AEE AA ++K KP+V Sbjct: 176 VGVGGDPIVGLYFQDLLEMFEKDAETDSIAIIGEIGGDAEERAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 F++G+ AP G+ MGHAGA+IS G G A++K+ A + AGI +A A I Sbjct: 232 AFISGREAPKGKQMGHAGAIISSGSGTAKEKVAAFEAAGIPVARETAEI 280 >gi|225012880|ref|ZP_03703313.1| succinyl-CoA synthetase, alpha subunit [Flavobacteria bacterium MS024-2A] gi|225003002|gb|EEG40979.1| succinyl-CoA synthetase, alpha subunit [Flavobacteria bacterium MS024-2A] Length = 290 Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 157/298 (52%), Positives = 212/298 (71%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K++VQG TG GTFH Q I Y T +VGG+ P KG +++ PVF Sbjct: 1 MSVLVNKNSKIIVQGFTGSEGTFHATQMIEY-GTNIVGGVTPGKGGQT----HLDKPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA + A+ ++I+VPP+ A DAI+E+ EA I +I+ ITEGIPV DM + A ++ Sbjct: 56 SVAEAVKTAGADTTIIFVPPAFAADAIMEAAEAGIKVIITITEGIPVNDMTKAYAYVKSQ 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG++TP+ K+GIMPG +F+KG VGI+S+SGTLTYEA Q +GLG STA Sbjct: 116 GATLIGPNCPGVITPEEAKVGIMPGFVFKKGRVGIVSKSGTLTYEASDQVVAQGLGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT D +ELF+ D T+ IVM+GEIGG E +AAQ++K G KP++ Sbjct: 176 IGIGGDPIIGTTTKDAVELFMNDSETDCIVMIGEIGGQLEADAAQWIK---ANGNMKPVI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + AE K M+E GI + SPA+IG + E+LG Sbjct: 233 GFIAGETAPKGRTMGHAGAIVGGSEDTAEAKKRIMRECGIHVVDSPAQIGAKVAEVLG 290 >gi|332520441|ref|ZP_08396903.1| succinyl-CoA synthetase, alpha subunit [Lacinutrix algicola 5H-3-7-4] gi|332043794|gb|EGI79989.1| succinyl-CoA synthetase, alpha subunit [Lacinutrix algicola 5H-3-7-4] Length = 290 Score = 288 bits (736), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 153/298 (51%), Positives = 213/298 (71%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG +++ PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIEY-GTNVVGGVTPGKGGQT----HLDKPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+ A+ ++I+VPP+ A DAI+E+ +A I +I+CITEGIPV DM++ ++ Sbjct: 56 TVTEAVEKVGADTTIIFVPPAFAADAIMEAADAGIKVIICITEGIPVADMIKASDYIKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP K+GIMPG +F++G VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLVGPNCPGVITPGEAKVGIMPGFVFKQGKVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D+ATE +VM+GEIGG E +AA + K+ G KKPI+ Sbjct: 176 IGIGGDPIIGTTTKEAVELLINDDATECVVMIGEIGGQLEADAANWYKN---SGSKKPII 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G A+ K M++ GI + SPA IG+ + E+LG Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSDDTAQAKKAIMRDCGIHVVDSPAEIGKKVAEVLG 290 >gi|288929100|ref|ZP_06422946.1| succinyl-CoA synthase, alpha subunit [Prevotella sp. oral taxon 317 str. F0108] gi|288330084|gb|EFC68669.1| succinyl-CoA synthase, alpha subunit [Prevotella sp. oral taxon 317 str. F0108] Length = 292 Score = 288 bits (736), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 143/289 (49%), Positives = 202/289 (69%), Gaps = 9/289 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNT+++VQG+TG+ G FH + Y T VVGG P K +G +PVF Sbjct: 1 MSILINKNTRLIVQGITGRDGGFHATKMKAYG-TNVVGGTSPGKAGQEVSG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T AN SVI+VP + A DA++E+ +A I LI+CITEG+P LD+V+ + + Sbjct: 56 TVRDAVEATQANTSVIFVPAAFAKDAMMEAADAGIQLIICITEGVPTLDVVQAYNYIHQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++LIGPNCPG+++P+ +GIMP +IF+KG G++SRSGTLTYE V+ +Q G+GQSTA Sbjct: 116 GAKLIGPNCPGLISPEESMVGIMPTNIFKKGGTGVISRSGTLTYEVVYNLTQNGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ G F D+LE+F D T+SI ++GEIGG AEE AA+++K KP+ Sbjct: 176 VGVGGDPIVGLYFQDLLEMFENDPETDSIAIIGEIGGDAEERAAEYIKAHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 F++G+ AP G+ MGHAGA+IS G G A++K+ A + AGI +A + I Sbjct: 232 AFISGREAPKGKQMGHAGAIISSGSGTAKEKVAAFEAAGIPVARETSEI 280 >gi|148925904|ref|ZP_01809591.1| succinyl-coA synthetase alpha chain [Campylobacter jejuni subsp. jejuni CG8486] gi|145844890|gb|EDK21994.1| succinyl-coA synthetase alpha chain [Campylobacter jejuni subsp. jejuni CG8486] gi|284925797|gb|ADC28149.1| succinyl-coA synthetase alpha chain [Campylobacter jejuni subsp. jejuni IA3902] Length = 289 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 153/298 (51%), Positives = 199/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y T +VGG+ P KG G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTNIVGGVTPHKGGQTHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T + CK+GIMPG IF+KG VG++S+SGTLTYEA Q Q G G STA Sbjct: 116 GMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVVQGGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D+ T++I+M+GEIGGS E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFQKDDETKAIIMIGEIGGSLEVEAAKFIKENI----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++LG Sbjct: 232 AFIAGATAPKGKRMGHAGAIVGSADESAAAKKEALKSYGIHVVDSPALIGEEIQKILG 289 >gi|146300647|ref|YP_001195238.1| succinyl-CoA synthetase, alpha subunit [Flavobacterium johnsoniae UW101] gi|146155065|gb|ABQ05919.1| succinyl-CoA synthetase, alpha subunit [Flavobacterium johnsoniae UW101] Length = 290 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 153/298 (51%), Positives = 217/298 (72%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG T +++ PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHASQMIEYG-TNVVGGVTPGKGGT----SHLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ++ A+ S+I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DM++ +++ Sbjct: 56 TVKDAVDQAGADTSIIFVPPAFAADAIMEAADAGIKVIIAITEGIPVADMIKANNYVKER 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPG++TP K+GIMPG +F+KG+VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 SSRLIGPNCPGVITPGEAKVGIMPGFVFKKGTVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE+I+M+GEIGG E +AA+++K + G +KP++ Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETEAIIMIGEIGGQLEADAAKWVKAD---GNRKPVI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G A K M++ GI + SPA IG+ + E+LG Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSDDTAAAKKQIMRDNGIHVVDSPAEIGKKVKEVLG 290 >gi|68475125|ref|XP_718448.1| hypothetical protein CaO19.10866 [Candida albicans SC5314] gi|68475666|ref|XP_718181.1| hypothetical protein CaO19.3358 [Candida albicans SC5314] gi|46439937|gb|EAK99249.1| hypothetical protein CaO19.3358 [Candida albicans SC5314] gi|46440213|gb|EAK99522.1| hypothetical protein CaO19.10866 [Candida albicans SC5314] Length = 323 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 169/296 (57%), Positives = 217/296 (73%), Gaps = 8/296 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V K+TKV+ QG TGK TFH EQAI Y T VVGGI+P+K T +++ PVF T Sbjct: 24 NLKVTKDTKVIYQGFTGKQATFHAEQAIAYG-TDVVGGINPRKAGTT----HLDRPVFGT 78 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + A+A+ I+VPP A AI E+I AEIPL V ITEGIP DMVR+ L+ + Sbjct: 79 VAEAMKEAGASATGIFVPPPLAAAAIEEAIAAEIPLAVAITEGIPQKDMVRISQILKTQE 138 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ PD CKIGIMP SI ++G VG++S+SGTLTYEAV QT+ GLGQS Sbjct: 139 KTRLVGPNCPGLIAPDQCKIGIMPSSIHQRGKVGVISKSGTLTYEAVAQTTAVGLGQSLV 198 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE--AKRGRKKP 238 +G+GGDP GT FID L L+L D TE I+M+GEIGGSAEEEA++FLK + KP Sbjct: 199 IGMGGDPFPGTNFIDALTLYLNDPETEGIIMIGEIGGSAEEEASEFLKQHNLTRPEGPKP 258 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 +VGF+AG +APPGR MGHAGA+++GGKG A+ KI A++ AG+ + SPAR+G SL+ Sbjct: 259 VVGFIAGVSAPPGRRMGHAGAIVAGGKGDAKSKIAALESAGVVVEKSPARLGNSLL 314 >gi|121606839|ref|YP_984168.1| succinyl-CoA synthetase subunit alpha [Polaromonas naphthalenivorans CJ2] gi|120595808|gb|ABM39247.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Polaromonas naphthalenivorans CJ2] Length = 298 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 153/305 (50%), Positives = 204/305 (66%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++KNTKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSIYINKNTKVITQGITGKTGQFHTRMCREYANGKEAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F V EA + T A SVIYVPP+GA AI E++EA + L +CITEGIPV DM+ V+ R++ Sbjct: 57 FANVTEAAQATGATVSVIYVPPAGAAAAIWEAVEANLDLAICITEGIPVKDMLEVRNRMK 116 Query: 119 KSSSR------LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TPD KIGIMPG I R G +G++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRAGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV+ F D T++++M+GEIGG E EAA++ K Sbjct: 177 IGLGQSSAVGIGGDPINGLKHIDVMRAFNDDPDTDAVIMIGEIGGPDEAEAAEW----CK 232 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+ G + +P+ + + Sbjct: 233 ANMKKPIVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEACGFTVTRNPSEMAKL 292 Query: 293 LVELL 297 L LL Sbjct: 293 LKALL 297 >gi|239818149|ref|YP_002947059.1| succinyl-CoA synthetase subunit alpha [Variovorax paradoxus S110] gi|239804726|gb|ACS21793.1| succinyl-CoA synthetase, alpha subunit [Variovorax paradoxus S110] Length = 297 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 151/302 (50%), Positives = 212/302 (70%), Gaps = 18/302 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKK-GSTYWTGGNVNVP 57 MSI ++K+TKV+ QG+TGK G FHTE+ Y + V G++PKK G + + N+P Sbjct: 1 MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGESIF-----NIP 55 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 +F +V EA +T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ ++ Sbjct: 56 IFGSVKEAASQTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKM 115 Query: 118 EKS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + Sbjct: 116 KAKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLT 175 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + GLGQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E +AA++ K+ Sbjct: 176 EIGLGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEADAARWCKEH- 234 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 KKP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + + + + + Sbjct: 235 ---MKKPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFTVTRNFSELAK 291 Query: 292 SL 293 L Sbjct: 292 LL 293 >gi|283955956|ref|ZP_06373446.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 1336] gi|283792616|gb|EFC31395.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 1336] Length = 289 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 154/298 (51%), Positives = 199/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y T +VGG+ P KG G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTNIVGGVTPHKGGQTHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T + CK+GIMPG IF+KG VG++S+SGTLTYEA Q Q G G STA Sbjct: 116 GMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVVQGGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D+ T++IVM+GEIGGS E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFQKDDETKAIVMIGEIGGSLEVEAAKFIKENI----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++LG Sbjct: 232 AFIAGATAPKGKRMGHAGAIVGSADESAVAKKEALKSYGIHVVDSPALIGEEIQKILG 289 >gi|291386439|ref|XP_002709730.1| PREDICTED: succinate-CoA ligase, GDP-forming alpha subunit [Oryctolagus cuniculus] Length = 346 Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 179/294 (60%), Positives = 225/294 (76%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DKNTKV+ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 LYIDKNTKVICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGKTHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAE+PL+VCITEGIP DMVRVK +L ++ Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAIDEAIEAEMPLVVCITEGIPQQDMVRVKHKLLRQAK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE+FL D TE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 225 GIGGDPFNGTNFIDCLEIFLNDSTTEGIILIGEIGGNAEENAAEFLKQHNSGPNAKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 338 >gi|153951047|ref|YP_001398438.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. doylei 269.97] gi|152938493|gb|ABS43234.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. doylei 269.97] Length = 289 Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 154/298 (51%), Positives = 199/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y T +VGGI P KG G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTNIVGGITPHKGGQTHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T + CK+GIMPG IF+KG VG++S+SGTLTYEA Q Q G G STA Sbjct: 116 GMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVVQGGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D+ T++IVM+GEIGGS E EAA+F+++ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFQKDDETKAIVMIGEIGGSLEVEAAKFIQENI----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++LG Sbjct: 232 AFIAGATAPKGKRMGHAGAIVGSADESATAKKEALKSYGIHVVDSPALIGEEIQKILG 289 >gi|171057185|ref|YP_001789534.1| succinyl-CoA synthetase subunit alpha [Leptothrix cholodnii SP-6] gi|171059381|ref|YP_001791730.1| succinyl-CoA synthetase subunit alpha [Leptothrix cholodnii SP-6] gi|170774630|gb|ACB32769.1| succinyl-CoA synthetase, alpha subunit [Leptothrix cholodnii SP-6] gi|170776826|gb|ACB34965.1| succinyl-CoA synthetase, alpha subunit [Leptothrix cholodnii SP-6] Length = 297 Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 152/305 (49%), Positives = 209/305 (68%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTE--QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+T+V+ QG+TGK G FHT QA + V G++PKK + ++P+ Sbjct: 1 MSILINKDTRVITQGITGKTGQFHTLGCQAYANGKNAFVAGVNPKKAGEKFA----DIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EA ++ A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ +++ Sbjct: 57 YASVKEAAQQQGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMK 116 Query: 119 KS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TP+ KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPEEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV+ F D T++++M+GEIGG E EAA + K Sbjct: 177 IGLGQSSAVGIGGDPINGLKHIDVMRAFNDDPDTDAVIMIGEIGGPDEAEAAMW----CK 232 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G I +P+ + R Sbjct: 233 ANMKKPIVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFTITRNPSEMARL 292 Query: 293 LVELL 297 L LL Sbjct: 293 LKALL 297 >gi|307566441|ref|ZP_07628876.1| succinyl-CoA synthetase, alpha subunit [Prevotella amnii CRIS 21A-A] gi|307344866|gb|EFN90268.1| succinyl-CoA synthetase, alpha subunit [Prevotella amnii CRIS 21A-A] Length = 289 Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 146/290 (50%), Positives = 202/290 (69%), Gaps = 11/290 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN-VPVF 59 MSIL++KNT+++VQG+TG+ G+FH + Y T VVGG P KG G NVN +PVF Sbjct: 1 MSILINKNTRLIVQGITGRDGSFHATKMKEYG-TNVVGGTSPGKG-----GQNVNDIPVF 54 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EA + T AN S+I+VP + A DA+ E+I+ I L+VCITEG+P LD V + + Sbjct: 55 NTVKEAVKATRANTSIIFVPAAFAKDAMFEAIDGGIELVVCITEGVPTLDAVAAQRYAKL 114 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++IGPNCPG+++PD +GIMP +IF+KG G++SRSGTLTYE V+ +QEGLG S+ Sbjct: 115 RGVKVIGPNCPGLISPDESMVGIMPTNIFKKGHTGVISRSGTLTYEVVYNLTQEGLGLSS 174 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+G+GGDPV G F D+L++F D T+SI ++GEIGG AEE AA+F+K+ KP+ Sbjct: 175 AIGVGGDPVVGLYFEDLLQMFQDDPETDSIALIGEIGGDAEERAAKFIKEHV----TKPV 230 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 F++G+ APPG+ MGHAGA+IS G G A++KI A + G+ +A I Sbjct: 231 AVFISGQQAPPGKQMGHAGAIISSGSGTAKEKIAAFEAVGVPVAKETKEI 280 >gi|57167579|ref|ZP_00366719.1| SucD [Campylobacter coli RM2228] gi|305433085|ref|ZP_07402241.1| succinyl-CoA synthetase subunit alpha [Campylobacter coli JV20] gi|57020701|gb|EAL57365.1| SucD [Campylobacter coli RM2228] gi|304443786|gb|EFM36443.1| succinyl-CoA synthetase subunit alpha [Campylobacter coli JV20] Length = 289 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 154/298 (51%), Positives = 198/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y T +VGG+ P KG G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTNIVGGVTPHKGGQTHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVADAVKATGADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T + CK+GIMPG IF+KG VG++S+SGTLTYEA Q Q G G STA Sbjct: 116 GMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVVQGGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D T++IVM+GEIGGS E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFEKDNETKAIVMIGEIGGSLEVEAAKFIKENI----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++LG Sbjct: 232 AFIAGATAPKGKRMGHAGAIVGSADESAAAKKEALKSYGIHVVDSPALIGEEIQKILG 289 >gi|317484136|ref|ZP_07943066.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6] gi|316924640|gb|EFV45796.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6] Length = 290 Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 152/282 (53%), Positives = 199/282 (70%), Gaps = 8/282 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D ++VLVQG+TG+ G FHTE+ I Y T+VVGG+ P +G G VPVF Sbjct: 1 MSILIDDGSRVLVQGITGREGQFHTERMIRY-GTRVVGGVTPGRGGQSTLG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V +A T A+ SV +VP + A DA E+ EA I L+V I E +PVLDMVRVKA + Sbjct: 56 SVRQAVRETEADVSVAFVPAALAADAACEASEAGIRLVVVIAEHVPVLDMVRVKAFFRER 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPGI++P CK+GIMPG I R G VG++SRSGTLTYEAV Q + GLGQS+ Sbjct: 116 GTLLVGPNCPGIISPGKCKVGIMPGYIHRPGGVGLVSRSGTLTYEAVHQLTAAGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G F+D+L+L+ D TE++ ++GEIGG AEE AA++++ KP+ Sbjct: 176 VGIGGDPIHGLSFVDLLKLYGDDPETEAVCLIGEIGGDAEERAAEYIRSSRY---PKPVF 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 GF+AG TAPPG+ MGHAGA+ISG G EDKI A +EAG+ + Sbjct: 233 GFIAGLTAPPGKRMGHAGAIISGTSGRGEDKIAAFEEAGVTV 274 >gi|241948219|ref|XP_002416832.1| succinyl-coa ligase [GDP-forming] alpha-chain, mitochondrial precursor, putative; succinyl-coa synthetase, alpha chain, putative [Candida dubliniensis CD36] gi|223640170|emb|CAX44417.1| succinyl-coa ligase [GDP-forming] alpha-chain, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 323 Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 168/296 (56%), Positives = 217/296 (73%), Gaps = 8/296 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V K+T+V+ QG TGK TFH EQAI Y T VVGGI+P+K T +++ PVF T Sbjct: 24 NLKVTKDTRVIYQGFTGKQATFHAEQAIAYG-TNVVGGINPRKAGTT----HLDRPVFGT 78 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + A+A+ I+VPP A AI E+I AEIPL V ITEGIP DMVR+ L+ + Sbjct: 79 VAEAIKEAGASATGIFVPPPLAAAAIEEAIAAEIPLAVAITEGIPQKDMVRIAQILKTQD 138 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ PD CKIGIMP SI ++G VG++S+SGTLTYEAV QT+ GLGQS Sbjct: 139 KTRLVGPNCPGLIAPDQCKIGIMPSSIHKRGKVGVISKSGTLTYEAVAQTTAVGLGQSLV 198 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE--AKRGRKKP 238 +G+GGDP GT FID L L+L D TE I+M+GEIGGSAEEEA++FLK + KP Sbjct: 199 IGMGGDPFPGTNFIDALTLYLNDPETEGIIMIGEIGGSAEEEASEFLKQHNLTRPEGPKP 258 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 +VGF+AG +APPGR MGHAGA+++GGKG A+ KI A++ AG+ + SPAR+G SL+ Sbjct: 259 VVGFIAGVSAPPGRRMGHAGAIVAGGKGDAKSKIAALESAGVVVEKSPARLGNSLL 314 >gi|332295921|ref|YP_004437844.1| succinyl-CoA synthetase, alpha subunit [Thermodesulfobium narugense DSM 14796] gi|332179024|gb|AEE14713.1| succinyl-CoA synthetase, alpha subunit [Thermodesulfobium narugense DSM 14796] Length = 319 Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 147/286 (51%), Positives = 197/286 (68%), Gaps = 10/286 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK +K+LVQG+TG+ G+FHTEQ + Y ++VV G+ PKKG T + VP+F Sbjct: 1 MSILLDKRSKILVQGITGREGSFHTEQMLNY-PSKVVAGVTPKKGGTLFLD---KVPIFD 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 +V EA + T AN SVI+VPP DAI E+I A+I LI+CITEG+ + +M V + L+ K Sbjct: 57 SVEEAVKETGANVSVIFVPPFACQDAIFEAIFAKIKLIICITEGVSLHEMADVYSFLKTK 116 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++ P CK GIMP + F G VGI+SRSGTLTYE + + G+GQST Sbjct: 117 KDIRLIGPNCPGVIVPGVCKAGIMPANAFMPGPVGIVSRSGTLTYEISYLLTSNGIGQST 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPV GT F DVL LF D TE + ++GEIGG+ EE+A +F+++ KP+ Sbjct: 177 VVGIGGDPVIGTTFKDVLMLFERDSQTELVFLIGEIGGTDEEDACEFIRE-----MTKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 V F++G +AP G+ MGHAGA++ G G + KI A + AG+ +A S Sbjct: 232 VAFISGASAPEGKRMGHAGAIVYGKMGSVQSKIEAFRSAGVIVAES 277 >gi|238879344|gb|EEQ42982.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Candida albicans WO-1] Length = 323 Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 168/296 (56%), Positives = 216/296 (72%), Gaps = 8/296 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V K+TKV+ QG TGK TFH EQAI Y T VVGGI+P+K T +++ PVF T Sbjct: 24 NLKVTKDTKVIYQGFTGKQATFHAEQAIAYG-TDVVGGINPRKAGTT----HLDRPVFGT 78 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + A+A+ I+VPP A AI E+I AEIPL V ITEGIP DMVR+ L+ + Sbjct: 79 VAEAMKEAGASATGIFVPPPLAAAAIEEAIAAEIPLAVAITEGIPQKDMVRISQILKTQE 138 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R +GPNCPG++ PD CKIGIMP SI ++G VG++S+SGTLTYEAV QT+ GLGQS Sbjct: 139 KTRFVGPNCPGLIAPDQCKIGIMPSSIHQRGKVGVISKSGTLTYEAVAQTTAVGLGQSLV 198 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE--AKRGRKKP 238 +G+GGDP GT FID L L+L D TE I+M+GEIGGSAEEEA++FLK + KP Sbjct: 199 IGMGGDPFPGTNFIDALTLYLNDPETEGIIMIGEIGGSAEEEASEFLKQHNLTRPEGPKP 258 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 +VGF+AG +APPGR MGHAGA+++GGKG A+ KI A++ AG+ + SPAR+G SL+ Sbjct: 259 VVGFIAGVSAPPGRRMGHAGAIVAGGKGDAKSKIAALESAGVVVEKSPARLGNSLL 314 >gi|49901174|gb|AAH76216.1| Succinate-CoA ligase, GDP-forming, alpha subunit [Danio rerio] Length = 324 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 171/295 (57%), Positives = 223/295 (75%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++KNTKV+ QG TGK GTFH++Q++ Y +Q+VGG+ P KG G +PVF + Sbjct: 27 NLYINKNTKVICQGFTGKQGTFHSQQSLDY-GSQLVGGVSPGKGGKTHLG----LPVFNS 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAK+ T A A+VIYVPP A AIIE+I+AE+PL VCITEGIP DMVRVK RL ++ Sbjct: 82 VKEAKDGTGAEATVIYVPPPFAAAAIIEAIDAEMPLAVCITEGIPQQDMVRVKHRLLRQN 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMPG I +KG +GI+SRSGTL YEAV QT+Q GLGQS Sbjct: 142 KTRLVGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLPYEAVHQTTQVGLGQSLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D TE I+++GEIGG AEE AA++LK KP+V Sbjct: 202 IGIGGDPFNGTNFIDCLEVFLQDPKTEGIILIGEIGGDAEENAAEYLKQHNSGANAKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 262 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTIFK 316 >gi|187736199|ref|YP_001878311.1| succinyl-CoA synthetase, alpha subunit [Akkermansia muciniphila ATCC BAA-835] gi|187426251|gb|ACD05530.1| succinyl-CoA synthetase, alpha subunit [Akkermansia muciniphila ATCC BAA-835] Length = 295 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 160/298 (53%), Positives = 210/298 (70%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ L+DKNT+++VQG+TG AG FH + + + T VV G+ P KG + G VPVF Sbjct: 1 MTSLIDKNTRLVVQGITGSAGAFHAKNCMDF-GTNVVAGVTPGKGGQLFEG---KVPVFD 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK+ T NAS+I+VPP A DAI+E+ +A + LIVCITEGIPV DM +VK L+ Sbjct: 57 TVAEAKKATDCNASMIFVPPPFAADAIMEAADAGVKLIVCITEGIPVQDMQKVKTFLKDK 116 Query: 121 SSRLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 LIGPNCPGI+ P +CKIGIMP IF+ G +GI+SRSGTLTYEAV+Q + GLGQS Sbjct: 117 DVTLIGPNCPGIVNPSANCKIGIMPAYIFKPGRIGIVSRSGTLTYEAVWQVTNMGLGQSM 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV G ++ F D T++ +M+GEIGGS EEEAA+++K+ KKP+ Sbjct: 177 CIGIGGDPVHGMTQQQAVQFFTEDPNTDAFIMIGEIGGSEEEEAAEWIKNNC----KKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAP GR MGHAGA+++GGKG A K A+K AGI +A +PA++G +L E + Sbjct: 233 AAFIAGATAPKGRRMGHAGAIVAGGKGTAAAKQEALKNAGIVVAKTPAQMGAALAEAM 290 >gi|226227051|ref|YP_002761157.1| succinyl-CoA synthetase alpha chain [Gemmatimonas aurantiaca T-27] gi|226090242|dbj|BAH38687.1| succinyl-CoA synthetase alpha chain [Gemmatimonas aurantiaca T-27] Length = 290 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 155/297 (52%), Positives = 207/297 (69%), Gaps = 12/297 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +D +TK++VQG+TG+ G+FH +Q I Y T+VV G+ P KG + G P+F Sbjct: 1 MSIFIDNSTKLVVQGITGRDGSFHAKQMIEY-GTKVVAGVTPGKGGQTFEG---TAPIFD 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T AN SVIYVPP A DAI+E+ A + IVCITEG+PVLDM +V +++ Sbjct: 57 TVYDAVQATGANTSVIYVPPMYAADAIMEAAAAGVKFIVCITEGVPVLDMTKVYPYVKEH 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP K+GI+PG I G VG++SRSGTLTYE V ++ G+GQST Sbjct: 117 GARLLGPNCPGLITPGESKVGIIPGRICAPGPVGVVSRSGTLTYEVVNALTKAGIGQSTC 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FID L F D T+++ M+GEIGG+ E+EAA F+K+ KP+V Sbjct: 177 VGIGGDPINGTNFIDCLAAFEKDPNTKAVAMMGEIGGTDEQEAATFIKEH----MTKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISG G A +KI++ K AG+ +A P VEL+ Sbjct: 233 GFIAGQTAPPGRRMGHAGAIISGSAGTAAEKIDSFKAAGMGVAQRPI----DFVELI 285 >gi|91217713|ref|ZP_01254670.1| Succinyl-CoA ligase, alpha subunit [Psychroflexus torquis ATCC 700755] gi|91184217|gb|EAS70603.1| Succinyl-CoA ligase, alpha subunit [Psychroflexus torquis ATCC 700755] Length = 302 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 154/297 (51%), Positives = 212/297 (71%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K++VQG TG G+FH EQ I Y T VVGG+ P KG T G PVF Sbjct: 12 MSVLVNKNSKIIVQGFTGSEGSFHAEQMIDY-GTNVVGGVTPGKGGTTHLG----RPVFN 66 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A E+ A+ S+I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DM++ ++ Sbjct: 67 TVSDAVEKAGADTSIIFVPPAFAADAIMEAADAGIKVIIAITEGIPVSDMIKASDYIKDK 126 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG +F+KG VGI+S+SGTLTYEA Q +EG G +TA Sbjct: 127 DCRLIGPNCPGVITPGEAKVGIMPGFVFKKGKVGIVSKSGTLTYEAADQVVKEGYGITTA 186 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +E+ + D TE +VM+GEIGG E EAA++ K+ G KKP++ Sbjct: 187 IGIGGDPIIGTTTKEAVEMLVNDPETECVVMIGEIGGQLEAEAAKWYKE---SGSKKPVI 243 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGA++ G + A+ K +K++GI + SPA IG+ + E+L Sbjct: 244 GFIAGETAPAGRTMGHAGAIVGGSEDTAQAKKAILKDSGIHVVDSPAEIGKKVAEVL 300 >gi|159901078|ref|YP_001547325.1| succinyl-CoA synthetase subunit alpha [Herpetosiphon aurantiacus ATCC 23779] gi|159894117|gb|ABX07197.1| succinyl-CoA synthetase, alpha subunit [Herpetosiphon aurantiacus ATCC 23779] Length = 293 Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 161/299 (53%), Positives = 215/299 (71%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL DKNT+++VQG+TG+ G FH+ Q + Y T +VGG+ P +G G V PVF Sbjct: 1 MSILADKNTRLIVQGITGREGEFHSRQMLEYG-TNLVGGVTPGRGGQKAVDGRV--PVFN 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANA+VIYVP + A DA+ E+ +A IPLIVCITEG+P LDMV ++ Sbjct: 58 TVKQAVKETGANATVIYVPAAFAPDAVREAADAGIPLIVCITEGVPALDMVATYEFVKLK 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP K+GI+PGSI + G VG++S+SGTLTYEAV ++ GLGQ++ Sbjct: 118 GSRLIGPNCPGLLTPGEAKLGIIPGSIAKPGPVGVVSKSGTLTYEAVDALTRIGLGQTSI 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVL +F AD ATE+IV++GEIGG+AE++AA F+K+ KP+V Sbjct: 178 VGIGGDPIIGTNFIDVLAMFQADPATEAIVLIGEIGGNAEQDAAAFIKENV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGG-AEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG++APPG+ MGHAGA+I G G A++KI A++ G +A P I + + E LG Sbjct: 234 SFIAGQSAPPGKRMGHAGAIIGAGGEGTAQEKIEALEAVGAKVAKLPTDIAKLVAESLG 292 >gi|325287862|ref|YP_004263652.1| succinyl-CoA synthetase subunit alpha [Cellulophaga lytica DSM 7489] gi|324323316|gb|ADY30781.1| succinyl-CoA synthetase, alpha subunit [Cellulophaga lytica DSM 7489] Length = 290 Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 158/298 (53%), Positives = 210/298 (70%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH EQ I Y T VVGG+ P KG G PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAEQMIEY-GTNVVGGVTPGKGGQEHLG----RPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+ A+ ++I+VPP+ A DAI+E+ A I +I+ ITEGIPV DMV+ ++ Sbjct: 56 TVLEAVEKVGADTTIIFVPPAFAADAIMEAANAGIKVIITITEGIPVADMVKASDYIKDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG +F+ G+VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLIGPNCPGVITPGEAKVGIMPGFVFKSGTVGIVSKSGTLTYEAADQVVRQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D ATE +VM+GEIGG E +AA++ K+ G KKPIV Sbjct: 176 IGIGGDPIIGTTTKEAVELLINDPATECVVMIGEIGGQLEADAAKWYKE---SGSKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G A+ K MKE GI + SPA IG+ + E++G Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSDDTAQAKKAIMKECGIHVVDSPAEIGKKVKEVMG 290 >gi|260944128|ref|XP_002616362.1| hypothetical protein CLUG_03602 [Clavispora lusitaniae ATCC 42720] gi|238850011|gb|EEQ39475.1| hypothetical protein CLUG_03602 [Clavispora lusitaniae ATCC 42720] Length = 324 Score = 285 bits (729), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 167/297 (56%), Positives = 217/297 (73%), Gaps = 8/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V+K+TKV+ QG TGK TFH EQAI Y T+VVGG +PKK T +++ PVF Sbjct: 25 NLKVNKDTKVIYQGFTGKQATFHAEQAIAYG-TKVVGGTNPKKAGTT----HLDRPVFAN 79 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A A+ I+VPP A AI E+IEAEI L V ITEGIP DMVR+ L+ +S Sbjct: 80 VRDAIKETGATATGIFVPPPIAAAAIEEAIEAEIELAVAITEGIPQHDMVRIAQILKTQS 139 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ PD CKIGIMP SI ++G VGI+SRSGTLTYEAV QT+ GLGQS Sbjct: 140 KTRLVGPNCPGLIAPDQCKIGIMPSSIHKRGRVGIISRSGTLTYEAVAQTTNVGLGQSLV 199 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE--AKRGRKKP 238 +G+GGDP GT FID L L+L D TE I+++GEIGG+AEEEA++FLK + KP Sbjct: 200 IGMGGDPFPGTNFIDALTLYLNDPETEGIILIGEIGGTAEEEASEFLKQHNLTRPEGPKP 259 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 +V F+AG +APPGR MGHAGA+++GGKG A+ KI A++ AG+ + SPAR+G SL++ Sbjct: 260 VVSFIAGVSAPPGRRMGHAGAIVAGGKGDAKSKIAALESAGVVVEKSPARLGNSLLQ 316 >gi|260062944|ref|YP_003196024.1| succinyl-CoA synthetase subunit alpha [Robiginitalea biformata HTCC2501] gi|88784512|gb|EAR15682.1| succinyl-CoA synthetase, alpha subunit [Robiginitalea biformata HTCC2501] Length = 290 Score = 285 bits (729), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 158/297 (53%), Positives = 208/297 (70%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH EQ I Y T VVGG+ P KG G PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAEQMIDYG-TNVVGGVTPGKGGQKHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A+ S+I+VPP+ A DAI+E+ A I +I+ ITEGIPV DM++ + ++ Sbjct: 56 TVQDAVSETGADTSIIFVPPAFAADAIMEAAHAGIKVIITITEGIPVADMIKAHSYVKDR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TP K+GIMPG +F KG VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 GSRLIGPNCPGVITPGEAKVGIMPGFVFEKGGVGIVSKSGTLTYEAADQVVRQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + LEL + D TE +VM+GEIGG E EAA++ K+ G KKP+V Sbjct: 176 IGIGGDPIIGTTTREALELLVTDPETECVVMIGEIGGQLEAEAARWYKES---GSKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGA++ G A+ K M+E GI + SPA+IG + E+L Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSDDTAQAKKRIMRECGIHVVDSPAKIGEKVSEVL 289 >gi|301065030|ref|ZP_07205375.1| succinyl-CoA synthetase, alpha subunit [delta proteobacterium NaphS2] gi|300440879|gb|EFK05299.1| succinyl-CoA synthetase, alpha subunit [delta proteobacterium NaphS2] Length = 291 Score = 285 bits (728), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 163/300 (54%), Positives = 216/300 (72%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD ++V+VQG+TG+ GTFHT+Q + Y T VVGG+ P KG G VPVF Sbjct: 1 MSILVDDKSRVVVQGITGREGTFHTKQMLAY-GTSVVGGVTPGKGGQVAEG----VPVFH 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V +A ER A+ S I+VPP A DA++E+ + I +IVCITEGIP LDMV+V L+ Sbjct: 56 SVRDAVEREGADVSCIFVPPPFAADAVMEAAASGIKVIVCITEGIPTLDMVKVDRFLKDR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPGI++P K+GIMPG I R G +G++SRSGTLTYE V Q + GLGQST Sbjct: 116 DVVLIGPNCPGIISPGKTKVGIMPGDIHRPGRMGVISRSGTLTYEVVGQLTGVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G+ FID L F D T +V++GEIGG+AEEEAA+++K KP+ Sbjct: 176 IGIGGDPIIGSSFIDHLNRFKDDPETNGVVLIGEIGGTAEEEAAEYIKASF----SKPVT 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AGKTAPPG+ MGHAGA+I+GGKG A+DKI A+K AGI +APS A +G+++++++G + Sbjct: 232 AFIAGKTAPPGKRMGHAGAIIAGGKGKAQDKIKALKAAGIAVAPSLAELGKTVLKVMGRI 291 >gi|313125862|ref|YP_004036132.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Halogeometricum borinquense DSM 11551] gi|312292227|gb|ADQ66687.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Halogeometricum borinquense DSM 11551] Length = 289 Score = 285 bits (728), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 148/298 (49%), Positives = 211/298 (70%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD +T+V+VQG+TG G FHT+Q + Y T VV G P KG G +PV+ Sbjct: 1 MSILVDDDTRVVVQGITGGEGNFHTQQMVEYG-TNVVAGAVPGKGGQEVDG----IPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E A+ASV++VPP+ AGDA+ E+++ ++ L+V ITEGIP DM +V RL + Sbjct: 56 TVNQAVEEEDADASVVFVPPAFAGDAVFEALDTDLDLVVAITEGIPTQDMAKVNKRLSEV 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPG++TP K+GI+PG+IF G+VG++SRSGTLTY+ V + G+GQ+TA Sbjct: 116 DTHLVGPNCPGLITPGEAKLGILPGNIFESGNVGLVSRSGTLTYQVVSNLTDRGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT F+D LELF AD+ T+++VM GEIGG EE+AA+++ + P+ Sbjct: 176 IGIGGDPIIGTSFVDALELFEADKDTDAVVMCGEIGGEDEEQAAKYIAEN----MDTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G AE KI+A+ +AG+ + +P + + + L Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAESKISALNDAGVPVGDTPNEVADHIEDFL 289 >gi|315607960|ref|ZP_07882953.1| succinyl-CoA synthetase subunit alpha [Prevotella buccae ATCC 33574] gi|315250429|gb|EFU30425.1| succinyl-CoA synthetase subunit alpha [Prevotella buccae ATCC 33574] Length = 290 Score = 285 bits (728), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 145/289 (50%), Positives = 198/289 (68%), Gaps = 9/289 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNT+++VQG+TG+ G+FH + Y T VVGG P K +G +PVF Sbjct: 1 MSILINKNTRLIVQGITGRDGSFHATKMKEYG-TNVVGGTSPGKAGQEVSG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T AN SVI+VP A DA++E+ +A I LI+CITEG+P LD+V+ + + Sbjct: 56 TVRDAVEATQANTSVIFVPAPFAKDAMMEAADAGINLIICITEGVPTLDVVQAYNYIRQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P+ GIMP IF+KG G++SRSGTLTYE V+ +Q GLGQSTA Sbjct: 116 GANLIGPNCPGLISPEESMAGIMPTGIFKKGRTGVISRSGTLTYEVVYNLTQSGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ G F D+LE+F D T+SI ++GEIGG AEE AA ++K KP+V Sbjct: 176 VGVGGDPIVGLYFQDLLEMFEKDAETDSIAIIGEIGGDAEERAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 F++G+ AP G+ MGHAGA+IS G G A++K+ A + GI +A A I Sbjct: 232 AFISGREAPKGKQMGHAGAIISSGSGTAKEKVAAFEAVGIPVARETAEI 280 >gi|313675255|ref|YP_004053251.1| succinyl-CoA synthetase, alpha subunit [Marivirga tractuosa DSM 4126] gi|312941953|gb|ADR21143.1| succinyl-CoA synthetase, alpha subunit [Marivirga tractuosa DSM 4126] Length = 291 Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 156/297 (52%), Positives = 211/297 (71%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG GTFH EQ I Y T VVGG+ P KG +++ PVF Sbjct: 1 MSVLVNKDSKVIVQGFTGSEGTFHAEQMIEYG-TNVVGGVTPGKGGQK----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + AN S+I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DM++ K ++ Sbjct: 56 TVEDAVKEAGANVSIIFVPPAFAADAIMEAADAGIKVIITITEGIPVKDMMKAKTYIQDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP K+GIMPG +F+KG +GI+S+SGTLTYEA Q + GLG STA Sbjct: 116 DLTLIGPNCPGVITPGEAKVGIMPGFVFKKGKIGIVSKSGTLTYEAADQIVKAGLGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +++ + D+ TE+IVM+GEIGG+ E EAA+++K+ G KKP+V Sbjct: 176 IGIGGDPIIGTPTKEAVKMLMEDDETEAIVMIGEIGGNYEAEAARWIKE---NGNKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AGKTAP GR MGHAGA+I G AE K+ M E GI + SPA IG ++ + L Sbjct: 233 GFIAGKTAPAGRRMGHAGAIIGGKDDTAEAKMKIMDECGIYVVQSPADIGETMKKAL 289 >gi|332883390|gb|EGK03673.1| hypothetical protein HMPREF9456_01740 [Dysgonomonas mossii DSM 22836] Length = 290 Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 148/297 (49%), Positives = 217/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++++T+++VQG+TG+ G+FHT++ + Y T+VVGG P KG T G VPVF Sbjct: 1 MSILINESTRLIVQGITGRDGSFHTKKMLEYG-TKVVGGTTPGKGGTDILG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T AN S+I+VP A DAI+E+ +A I LI+CI+EG+P LD+V+ ++ Sbjct: 56 TVADAVKATQANTSIIFVPARFAADAIMEAADAGIELIICISEGVPTLDVVKAHRFVQMK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P+ +GI+PG IF+KG++G++SRSGTLTYE V+ + +GQS+A Sbjct: 116 GAILIGPNCPGLMSPEKSLVGILPGQIFKKGNIGVISRSGTLTYEVVYHLTANSMGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDPV G F ++LE+ D T++IVM+GEIGG+AEE+AA+++K KP+V Sbjct: 176 IGMGGDPVVGLYFRELLEMLQNDPDTDAIVMIGEIGGNAEEQAAEYIKKHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG++APPG+ MGHAGA+IS G G A +KI A++ AG+ +A P+ I L E L Sbjct: 232 GFIAGQSAPPGKQMGHAGAIISSGSGTAAEKIAALEAAGVQVAKEPSEIPGILKEKL 288 >gi|15606732|ref|NP_214112.1| succinyl-CoA ligase alpha subunit [Aquifex aeolicus VF5] gi|6647848|sp|O67547|SUCD_AQUAE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|2983962|gb|AAC07509.1| succinyl-CoA ligase alpha subunit [Aquifex aeolicus VF5] Length = 305 Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 151/299 (50%), Positives = 211/299 (70%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+K+TKV+VQG+TGK G+FH +Q Y TQVV G+ P KG G +PVF Sbjct: 1 MAILVNKDTKVVVQGITGKEGSFHAKQCKEY-GTQVVAGVTPGKGGMEVEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T AN S+I+VP A DAI+E+++A I L+VCITEGIPV DM+ VK + K+ Sbjct: 56 TVKEAVKETGANCSLIFVPAPFAADAIVEALDAGIELVVCITEGIPVKDMMMVKDYMLKN 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +++L+GPNCPG++TP K+GIMPG IF++G +GI+SRSGTLTYEA +Q ++ GLGQS Sbjct: 116 YPNAKLVGPNCPGVITPGEAKVGIMPGHIFKRGKIGIVSRSGTLTYEAAYQLTKYGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV G DV+E+F D TE+I+M+ G + + ++ KP Sbjct: 176 TAVGIGGDPVHGLTHRDVIEMFNKDPETEAILMI----GEIGGTEEEEAAEYIEKEVDKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + ++AG TAPPG+ MGHAGA+I GGKG A+ K+ A+++AG + +PA+IG ++ ++L Sbjct: 232 VFAYIAGITAPPGKRMGHAGAIIMGGKGTAKAKMEALEKAGAYVIENPAKIGETVAKIL 290 >gi|150025053|ref|YP_001295879.1| succinyl-CoA synthetase, alpha subunit [Flavobacterium psychrophilum JIP02/86] gi|149771594|emb|CAL43066.1| Succinyl-CoA synthetase, alpha subunit [Flavobacterium psychrophilum JIP02/86] Length = 290 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 154/298 (51%), Positives = 214/298 (71%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH EQ I Y T VVGG+ P KG T +++ PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAEQMIEY-GTNVVGGVTPGKGGTM----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E+ A+ ++I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DM++ ++ Sbjct: 56 TVKDAVEKAGADTTIIFVPPAFAADAIMEAADAGIKVIIAITEGIPVADMIKANDYIKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + RLIGPNCPGI+TP K+GIMPG +F+KG+VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 NCRLIGPNCPGIITPGEAKVGIMPGFVFKKGNVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D T IVM+GEIGG E +AA++++ + G +KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETHCIVMIGEIGGQLEADAAKWVRAD---GNRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAP GRTMGHAGA++ G AE K ++E GI + SPA IG+ + E+LG Sbjct: 233 GFIAGVTAPAGRTMGHAGAIVGGEDDTAEAKKRILRENGIHVVDSPAEIGKKVKEVLG 290 >gi|91790510|ref|YP_551462.1| succinyl-CoA synthetase subunit alpha [Polaromonas sp. JS666] gi|91699735|gb|ABE46564.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Polaromonas sp. JS666] Length = 297 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 151/305 (49%), Positives = 206/305 (67%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++++TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSIYINQHTKVITQGITGKTGQFHTRMCRDYANGKECFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + V EA + T A SVIYVPP+GA AI E++EA + L +CITEGIPV DM+ V+ R++ Sbjct: 57 YANVTEAAQATGATVSVIYVPPAGAAAAIWEAVEANLDLAICITEGIPVRDMLEVRNRMK 116 Query: 119 KSSSR------LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TP+ KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKRTLLLGPNCPGLITPEEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAA + K Sbjct: 177 IGLGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAAVW----CK 232 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G + +P+ + + Sbjct: 233 ANMKKPIVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFTVTRNPSEMAKL 292 Query: 293 LVELL 297 L LL Sbjct: 293 LKALL 297 >gi|332666698|ref|YP_004449486.1| succinyl-CoA synthetase subunit alpha [Haliscomenobacter hydrossis DSM 1100] gi|332335512|gb|AEE52613.1| succinyl-CoA synthetase, alpha subunit [Haliscomenobacter hydrossis DSM 1100] Length = 290 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 154/298 (51%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+K+++++VQG TGK GTFH Q + Y +T ++GG+ P KG T +++ PV+ Sbjct: 1 MAVLVNKDSRIIVQGFTGKEGTFHATQMLEY-KTNLIGGVTPGKGGTT----HLDKPVWD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + A+ SVI+VPP+ A DAI+E+ +A I +I+CITEGIPV DMV+VKA + Sbjct: 56 TVEQAVKLGGADVSVIFVPPAFAADAIMEAADAGIKVIICITEGIPVQDMVKVKAYIATR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TPD K GIMPG I +KG++GI+SRSGTLTYEAV Q ++ GLGQST Sbjct: 116 DCRLIGPNCPGVITPDEAKCGIMPGFIHKKGTIGIVSRSGTLTYEAVDQVTKAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE+I+M+GEIGG E EAA++++ KP+V Sbjct: 176 IGIGGDPIVGTSTKEAVELLMNDPETEAIIMIGEIGGGMEAEAARYVQAFG----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GR MGHAGA+I G AE K+ ++E GI + SPA +G ++++ LG Sbjct: 232 GFIAGQTAPKGRKMGHAGAIIGGDDDTAEAKMKILEECGIHVVKSPADLGTTVLKALG 289 >gi|332293185|ref|YP_004431794.1| succinyl-CoA synthetase, alpha subunit [Krokinobacter diaphorus 4H-3-7-5] gi|332171271|gb|AEE20526.1| succinyl-CoA synthetase, alpha subunit [Krokinobacter diaphorus 4H-3-7-5] Length = 291 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 153/298 (51%), Positives = 212/298 (71%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG +++ PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIDY-GTNVVGGVTPGKGGQT----HLDKPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+ A+ ++I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DM++ + Sbjct: 56 TVQEAVEKVGADTTIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMIKASDYISTK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG +F+KG+VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 ECRLIGPNCPGVITPGEAKVGIMPGFVFKKGTVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE++VM+GEIGG E +AA++ K+ G KKP++ Sbjct: 176 IGIGGDPIIGTTTKEAVELLINDPETEAVVMIGEIGGQLEGDAAKWYKE---SGSKKPVI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G A+ K M+E GI + SPA IG+ + E+LG Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSDDTAQAKKAIMRECGIHVVDSPAEIGKKVAEVLG 290 >gi|292656586|ref|YP_003536483.1| succinyl-CoA synthase subunit alpha [Haloferax volcanii DS2] gi|291372295|gb|ADE04522.1| succinyl-CoA synthase, alpha subunit [Haloferax volcanii DS2] Length = 289 Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 148/298 (49%), Positives = 208/298 (69%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI VD +T+V+VQG+TG G FHT Q + Y T VV G P KG G +PV+ Sbjct: 1 MSIFVDDDTRVVVQGITGGEGKFHTRQMVEYG-TNVVAGTSPGKGGQDVDG----IPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + ANASV++VPP+ AGDAI E+++ ++ L+V ITEG+P DM +V RL ++ Sbjct: 56 TVEEAVDEEDANASVVFVPPAFAGDAIFEALDTDLDLVVAITEGVPTQDMAKVNKRLSET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TP K+GI+PG+IF +G+VG++SRSGTLTY+ V ++ G+GQ+TA Sbjct: 116 DTRLIGPNCPGIITPGEAKLGILPGNIFEEGNVGLVSRSGTLTYQVVSNLTERGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT F+D LE F D T ++VM GEIGG EE+AA+++ + P+ Sbjct: 176 IGIGGDPIIGTSFVDALEAFENDPDTHAVVMCGEIGGEDEEQAAKYIAEN----MDTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G AE KI+A+ +A + + +P + + + L Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAESKISALNDASVPVGDTPNEVADHIEDFL 289 >gi|222480618|ref|YP_002566855.1| succinyl-CoA synthetase, alpha subunit [Halorubrum lacusprofundi ATCC 49239] gi|222453520|gb|ACM57785.1| succinyl-CoA synthetase, alpha subunit [Halorubrum lacusprofundi ATCC 49239] Length = 289 Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 155/298 (52%), Positives = 207/298 (69%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI VD +T+V+VQG+TG G FH Q I Y T VV G P KG G VPV+ Sbjct: 1 MSIFVDDDTRVVVQGITGGEGKFHAGQMIEYG-TNVVAGAVPGKGGQEVEG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E A+ASVI+VPP+ A DAI ES++ ++ L V ITEGIP DM +V RL + Sbjct: 56 TVDEAVEAENADASVIFVPPAFAADAIFESLDTDLDLAVAITEGIPTQDMAKVNKRLSEV 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TP K+GI+PG+IF G+VG++SRSGTLTY+ V ++ GLGQSTA Sbjct: 116 DTRLIGPNCPGIITPGEAKLGILPGNIFSDGNVGLVSRSGTLTYQVVDNLTERGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+ F AD+ T+++VM GEIGG EE+AA+F+ + P+ Sbjct: 176 IGIGGDPIIGTSFIDALDAFEADDDTDAVVMCGEIGGEDEEQAARFIGEH----MDTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G A+ KI+A+ +AG+ + +P + + + L Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAQSKIDALNDAGVPVGDTPEEVADHVEDFL 289 >gi|86130217|ref|ZP_01048817.1| Succinyl-CoA synthetase, alpha subunit [Dokdonia donghaensis MED134] gi|85818892|gb|EAQ40051.1| Succinyl-CoA synthetase, alpha subunit [Dokdonia donghaensis MED134] Length = 290 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 153/298 (51%), Positives = 212/298 (71%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG +++ PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIDY-GTNVVGGVTPGKGGQV----HLDKPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+ A+ ++I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DM++ + Sbjct: 56 TVQEAVEKVGADTTIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMIKASDYIATK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG +F++G VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 ECRLIGPNCPGVITPGEAKVGIMPGFVFKEGKVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D ATE++VM+GEIGG E +AA++ K+ G KKP++ Sbjct: 176 IGIGGDPIIGTTTKEAVELLINDPATEAVVMIGEIGGQLEGDAAKWYKE---SGSKKPVI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G A+ K M+E GI + SPA IG+ + E+LG Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSDDTAQAKKAIMRECGIHVVDSPAEIGKKVAEVLG 290 >gi|86143292|ref|ZP_01061694.1| Succinyl-CoA ligase, alpha subunit [Leeuwenhoekiella blandensis MED217] gi|85830197|gb|EAQ48657.1| Succinyl-CoA ligase, alpha subunit [Leeuwenhoekiella blandensis MED217] Length = 290 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 154/297 (51%), Positives = 210/297 (70%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG ++ PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIEYG-TNVVGGVTPGKGGQT----HLEKPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A+ S+I+VPP+ A DAI+ES +A I +I+ ITEGIPV DM++ ++ Sbjct: 56 TVEDAVKETGADVSIIFVPPAFAADAIMESADAGIKVIIAITEGIPVADMIKAADYIKDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG +F+KG VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLIGPNCPGVITPGEAKVGIMPGFVFKKGKVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE++VM+GEIGG E +AA+++K G KP++ Sbjct: 176 IGIGGDPIIGTTTKEAVELLINDPETEAVVMIGEIGGQLEADAAKWIK---ASGTTKPVI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGA++SG A DK +KE G+ + SPA IG+ + ELL Sbjct: 233 GFIAGETAPAGRTMGHAGAIVSGEGESAADKKKILKENGVHVVDSPAEIGKKVAELL 289 >gi|227823163|ref|YP_002827135.1| succinyl-CoA synthetase subunit alpha [Sinorhizobium fredii NGR234] gi|227342164|gb|ACP26382.1| succinyl-CoA synthetase alpha subunit [Sinorhizobium fredii NGR234] Length = 299 Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 147/304 (48%), Positives = 204/304 (67%), Gaps = 13/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNT+V+VQG TGK G+FH E Y T VVGG+ P KG ++ +PVF Sbjct: 1 MSILLDKNTRVIVQGFTGKIGSFHAEDMKRY-GTNVVGGVTPGKGGQ----AHLGMPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV A + T A+AS+I+VPP A D+I+E+ +A I L VCIT+GIP DM+RVK + + Sbjct: 56 TVKGAVQETGADASIIFVPPPFAADSIMEAADAGIRLCVCITDGIPSQDMIRVKRYMRRY 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 LIGPNC G++TP +GIMPGSI+ G +GI+ RSGTL YEA Q G+G Sbjct: 116 RFEDRMTLIGPNCAGMITPGEAMMGIMPGSIYLPGRIGIVGRSGTLGYEAASQMKALGVG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST++GIGGDPV G+ F D+LELF D T++++M+GEIGG E EAA + +D K Sbjct: 176 VSTSIGIGGDPVNGSSFKDMLELFEKDPGTDAVLMIGEIGGPQEAEAALWARDHM----K 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ ++AG +AP GR MGHAGA+IS A++K+ +K AG+ I P+P+ G ++ ++ Sbjct: 232 KPLIAYIAGLSAPKGRRMGHAGAIISAFGESAQEKVEILKSAGVTIVPTPSSFGETVADV 291 Query: 297 LGSL 300 L ++ Sbjct: 292 LSAM 295 >gi|126305401|ref|XP_001380103.1| PREDICTED: similar to Phosphoribosyl transferase domain containing 1 [Monodelphis domestica] Length = 341 Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 171/295 (57%), Positives = 223/295 (75%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +DKNT+++ QG TGK GTFH++QA+ Y V G K G T+ + +PVF T Sbjct: 44 NLYIDKNTRIICQGFTGKQGTFHSQQALDYGTNLVGGTTPGKGGKTH-----LGLPVFNT 98 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 V EAKE+T A ASVIYVPP A A+ E++EAE+PL+VCITEGIP DMVRVK A + + Sbjct: 99 VKEAKEQTGATASVIYVPPQFAAAAVKEAVEAEMPLVVCITEGIPQQDMVRVKHALMRQG 158 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 159 KTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 218 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT+FID L++FL D ATE I+++GEIGG+AEE AA FLK+ KP+V Sbjct: 219 IGIGGDPFNGTDFIDCLDVFLKDPATEGIILIGEIGGNAEENAAAFLKEHNSGPNAKPVV 278 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 279 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQNAGVVVSMSPAQLGSTIYK 333 >gi|154174472|ref|YP_001408276.1| succinate-CoA ligase subunit alpha [Campylobacter curvus 525.92] gi|112802748|gb|EAU00092.1| succinate-CoA ligase, alpha subunit subfamily [Campylobacter curvus 525.92] Length = 290 Score = 282 bits (721), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 146/300 (48%), Positives = 204/300 (68%), Gaps = 12/300 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNT+V+VQG+TGK G+FHT+ + Y TQ+ G+ P KG G V ++ Sbjct: 1 MSILIDKNTRVIVQGITGKEGSFHTQSCMDY-GTQIAAGVTPFKGGQTHLG----VKIYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK+ + A+AS+I+VP DAIIE+ +A I L V ITE +PVLDM+ KA K Sbjct: 56 TVKEAKDASGADASMIFVPAGFCKDAIIEAADAGIKLCVVITEHVPVLDMLAAKAYANKR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS--VGILSRSGTLTYEAVFQTSQEGLGQS 178 ++IGPNCPG+++ + CK+GIMP ++F++ S +GI+S+SGTLTYEA Q ++G G S Sbjct: 116 GMKIIGPNCPGVISANECKLGIMPSAVFKRASLNIGIISKSGTLTYEAANQICEQGYGIS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGD V G + ++L LF DE T+++VM+GEIGG E A+Q +++ KKP Sbjct: 176 TAIGIGGDAVIGMAYDEILPLFDEDEDTKAVVMIGEIGGELESRASQIIEN-----FKKP 230 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 IV F+AG +AP GR MGHAGA+I+ A+ K ++ AG I +PA+IG L E+LG Sbjct: 231 IVAFIAGASAPEGRKMGHAGAIINSKNASAKAKFEVLRAAGAHIVTNPAKIGEKLKEILG 290 >gi|296482469|gb|DAA24584.1| succinate-CoA ligase, GDP-forming alpha subunit precursor [Bos taurus] Length = 346 Score = 282 bits (721), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 177/294 (60%), Positives = 224/294 (76%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VD+NTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 LYVDRNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGKTHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAE+ L+VCITEGIP DMVRVK +L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAIDEAIEAEVSLVVCITEGIPQQDMVRVKHKLLRQGK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RL+GPNCPG++ P CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLVGPNCPGVINPGECKIGIMPGHIHKKGRVGIVSRSGTLTYEAVHQTTQVGLGQSLCV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 225 GIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKAKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGTTMYK 338 >gi|257051526|ref|YP_003129359.1| succinyl-CoA synthetase, alpha subunit [Halorhabdus utahensis DSM 12940] gi|256690289|gb|ACV10626.1| succinyl-CoA synthetase, alpha subunit [Halorhabdus utahensis DSM 12940] Length = 289 Score = 281 bits (720), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 154/296 (52%), Positives = 207/296 (69%), Gaps = 11/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD++T+V+VQG+TG G FH EQ I Y T VV G P KG G VPV+ Sbjct: 1 MSILVDEDTRVIVQGITGGEGEFHAEQMIEYG-TNVVAGAVPGKGGQEVHG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A A+ASV++VPP+ A DA+ E+++A + ++V ITEGIP D+ V A LE + Sbjct: 56 TVDRAAREEDADASVVFVPPAFAADALFEALDAPLDVVVAITEGIPTQDVSEVYAELEDT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPG++TP K+GI+PG+IF +GSVG++SRSGTLTY+ V ++ G+GQ+TA Sbjct: 116 DTHLVGPNCPGVITPGESKLGILPGNIFSEGSVGLVSRSGTLTYQIVDSLTERGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FID LELF AD TE++VM GEIGG EE AA+ P+V Sbjct: 176 VGIGGDPIVGTGFIDALELFEADPETEAVVMCGEIGGEDEEAAAE----YIAEEMDTPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVIS-GGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+AG+TAPPG+ MGHAGA++S GG G A+ KI+A++ AG+ + +P+ + LVE Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGGGTGTAQSKIDALEAAGVEVGETPSDVA-DLVE 286 >gi|268679714|ref|YP_003304145.1| succinyl-CoA synthetase, subunit alpha [Sulfurospirillum deleyianum DSM 6946] gi|268617745|gb|ACZ12110.1| succinyl-CoA synthetase, alpha subunit [Sulfurospirillum deleyianum DSM 6946] Length = 290 Score = 281 bits (719), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 154/297 (51%), Positives = 208/297 (70%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ K+TKV+VQG TGK G+FH EQ + Y TQ+VGG+ P KG + G PVF Sbjct: 1 MSILIHKDTKVVVQGFTGKEGSFHAEQCMAY-GTQIVGGVTPGKGGSVHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T A S+++VPP+ DAI+E+ +A I L V ITEG PV DM R KA K Sbjct: 56 TMKEAIASTGATVSMVFVPPAFVADAILEAADAGIELAVIITEGAPVRDMQRSKAYATKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + IGPNCPGI+T + CKIGIMPG+IF+KGS+G++S+SGTLTYE Q +EG G STA Sbjct: 116 GMKTIGPNCPGIITAEECKIGIMPGAIFKKGSIGLISKSGTLTYEGANQVCKEGFGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G + ++L +F D TE+IVM+GEIGG E +AAQF+K+ KPIV Sbjct: 176 IGIGGDPIIGLSYKELLAMFEEDSQTEAIVMIGEIGGDLEIQAAQFIKEHI----SKPIV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG++AP G+ MGHAGA++SG A++K++A+ G+ + SPA+IG+ + E+L Sbjct: 232 AFIAGQSAPKGKRMGHAGAIVSGSSCTAQEKMSALALVGVHVVKSPAQIGKKVAEVL 288 >gi|307128645|ref|YP_003880675.1| succinyl-CoA synthetase subunit alpha [Candidatus Sulcia muelleri CARI] gi|306483107|gb|ADM89977.1| succinyl-CoA synthetase, alpha subunit [Candidatus Sulcia muelleri CARI] Length = 291 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 155/298 (52%), Positives = 207/298 (69%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K +K++VQG TGK G+FH+++ I Y T ++GG+ P KG ++ PVF Sbjct: 1 MSILVNKFSKIIVQGFTGKEGSFHSKKMISY-GTPIIGGVTPGKGGK----KHLGKPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TV EA ++ AN S+I+VPP A DAIIESI++ I +IVCITEGIP+ DM+++K + K Sbjct: 56 TVEEAVKKLNANVSIIFVPPMFAYDAIIESIDSGIKIIVCITEGIPISDMLKIKNYINFK 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 LIGPNCPGI+TP+ K+GIMPG IF+KG VGI+S+SGTLTYEA Q + G G ST Sbjct: 116 KKCLLIGPNCPGIITPNEAKVGIMPGFIFKKGRVGIVSKSGTLTYEAADQIVKSGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDP+ GT ++ F D T+ IVM+GEIGG E +AA+++K++ KKP+ Sbjct: 176 AVGIGGDPIIGTTMKYIISEFFNDSETDIIVMIGEIGGKLEIDAAKWIKNKK---NKKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +GF+AG TAP GRTMGHAGA+I A KIN +K GI I SP++IG ++ Sbjct: 233 LGFIAGHTAPKGRTMGHAGAIIGNKNDTAIYKINILKNCGIHIVKSPSQIGNAVFNYF 290 >gi|256371137|ref|YP_003108961.1| succinyl-CoA synthetase, alpha subunit [Acidimicrobium ferrooxidans DSM 10331] gi|256007721|gb|ACU53288.1| succinyl-CoA synthetase, alpha subunit [Acidimicrobium ferrooxidans DSM 10331] Length = 295 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 161/303 (53%), Positives = 203/303 (66%), Gaps = 12/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI VD++T+V+VQGLTG+ G FH + Y TQVV G+ P KG T G +PVF Sbjct: 1 MSIFVDEHTRVIVQGLTGRQGMFHGLRNRAY-GTQVVAGVTPGKGGTDVEG----IPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD--MVRVKARLE 118 TV EA T ANAS I VPP A +AI+E+ A IPLIVCITE IP D MV R + Sbjct: 56 TVKEAAAATNANASFIVVPPRFAPEAILEAAAAGIPLIVCITEFIPAKDEAMVAAVLRRD 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS-VGILSRSGTLTYEAVFQTSQEGLGQ 177 +RLIGPNCPGI++P C IGI G I R G VGI+SRSGTLTY+A+++ SQ+G+GQ Sbjct: 116 YPGTRLIGPNCPGIISPGRCNIGITAGEIARPGGPVGIVSRSGTLTYQALYELSQQGVGQ 175 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 +T VGIGGDPV GT FID L F AD T +++M+GEIGG EE AA F+ + K Sbjct: 176 TTCVGIGGDPVPGTTFIDCLAAFEADPETRAVLMIGEIGGQDEELAAAFIAEH----MTK 231 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+V ++AG TAPPGR MGHAGA++SG G A+ KI A++ AG +A +P G +VE++ Sbjct: 232 PVVAYIAGVTAPPGRRMGHAGAIVSGSSGTAQAKIEALRAAGAIVAQNPTEAGERMVEVV 291 Query: 298 GSL 300 L Sbjct: 292 SRL 294 >gi|126273963|ref|XP_001387359.1| succinate-CoA ligase [Scheffersomyces stipitis CBS 6054] gi|126213229|gb|EAZ63336.1| succinate-CoA ligase [Pichia stipitis CBS 6054] Length = 324 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 171/298 (57%), Positives = 217/298 (72%), Gaps = 10/298 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFT 60 ++ V+ +TKV+ QG TGK TFH EQAI Y TQVVGG +PKK G T+ ++ PVF Sbjct: 25 NLKVNADTKVIYQGFTGKQATFHAEQAIAYG-TQVVGGTNPKKAGQTH-----LDRPVFA 78 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 +V +A +T A A+ I+VPP A AI E+I AEIPL V ITEGIP DMVRV L+ + Sbjct: 79 SVKDAIAQTGATATGIFVPPPIAAAAIEEAIAAEIPLAVAITEGIPQKDMVRVAQILKTQ 138 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI++PD CKIGIMP I ++G VGI+SRSGTLTYEAV QT+ GLGQS Sbjct: 139 EKTRLVGPNCPGIISPDQCKIGIMPSHIHQRGRVGIISRSGTLTYEAVAQTTAVGLGQSL 198 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE--AKRGRKK 237 +G+GGDP GT FID L LFL DE TE I+++GEIGG+AEEEAA+FLK + K Sbjct: 199 VIGMGGDPFPGTNFIDALTLFLRDEETEGIILIGEIGGTAEEEAAEFLKQHNLTRPQGPK 258 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 P+V F+AG +APPGR MGHAGA++SGGKG A+ KI +++ AG+ + SPAR+G SL+ Sbjct: 259 PVVSFIAGVSAPPGRRMGHAGAIVSGGKGDAKSKIASLQSAGVVVEASPARLGNSLLN 316 >gi|217977879|ref|YP_002362026.1| succinyl-CoA synthetase subunit alpha [Methylocella silvestris BL2] gi|217503255|gb|ACK50664.1| succinyl-CoA synthetase, alpha subunit [Methylocella silvestris BL2] Length = 308 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 148/302 (49%), Positives = 201/302 (66%), Gaps = 13/302 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+N++VLVQG TG GTFH ++ ++ C T VVGG+ P KG G PVF Sbjct: 1 MSILIDENSRVLVQGFTGDKGTFHAKE-MIECGTNVVGGVTPGKGGATHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T AN S+ +V P+ DAI+E+ +A I L+ IT+GIP DM+RVK L + Sbjct: 56 TVKDAVRATGANCSITFVAPAFCADAIMEAADAGIGLVCSITDGIPAQDMMRVKRYLLRY 115 Query: 121 S----SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + ++GPNC GI++P +GIMP +I+ +GSVGI+SRSGTL YEA Q + G+G Sbjct: 116 QRGRRTLMVGPNCAGIISPGKAMLGIMPSNIYMRGSVGIVSRSGTLGYEAAAQMKELGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L LF D TE+++M+GEIGG E EAA ++KD Sbjct: 176 VSTSVGIGGDPINGSSFLDHLILFEQDPETEAVMMIGEIGGPQEAEAAAWIKDN----MT 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VG+VAG TAP GR MGHAGA+IS A +K MK G+ +APSP+ +G ++ + Sbjct: 232 KPVVGYVAGLTAPKGRRMGHAGAIISASGDSAAEKSEIMKSYGLTVAPSPSELGATMARV 291 Query: 297 LG 298 LG Sbjct: 292 LG 293 >gi|254443608|ref|ZP_05057084.1| succinyl-CoA synthetase, alpha subunit subfamily [Verrucomicrobiae bacterium DG1235] gi|198257916|gb|EDY82224.1| succinyl-CoA synthetase, alpha subunit subfamily [Verrucomicrobiae bacterium DG1235] Length = 307 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 155/302 (51%), Positives = 212/302 (70%), Gaps = 12/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ TK+++QG+TG+ G H ++ Y TQVV G+ P KG + +VP+F+ Sbjct: 1 MSILITPETKIIIQGITGEFGARHARLSLDY-GTQVVAGVTPGKGGQTFEHAGKSVPIFS 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VA+A T A SVI+VPP A DAI+E ++A++ L V ITEGIPV DMVRVK +E S Sbjct: 60 SVADAVAATGATVSVIFVPPPFAADAILECVDAKVELAVAITEGIPVRDMVRVKRAMEGS 119 Query: 121 SSRLIGPNCPGILTP----DS---CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 S+RL+GPNCPG+++P DS C+IGI PG I +KG VG++SRSGTLTYEAV+Q + + Sbjct: 120 STRLVGPNCPGLVSPGEGEDSSGGCRIGIAPGYIHKKGHVGVVSRSGTLTYEAVYQLTVK 179 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +GQST VGIGGDPV GT +DV++LF D T I+++GEIGG+AE EAA+++K+ Sbjct: 180 DIGQSTCVGIGGDPVNGTSHLDVIKLFNEDPDTHGIILIGEIGGNAEVEAARWIKENC-- 237 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+ GF+AG TAPPGR MGHAGA++ G + AE KI KE GI +A +P+ + +L Sbjct: 238 --TKPVAGFIAGATAPPGRRMGHAGAIVGGAEDTAEAKIAVFKECGIEVADTPSDMADAL 295 Query: 294 VE 295 + Sbjct: 296 LR 297 >gi|163788965|ref|ZP_02183409.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [Flavobacteriales bacterium ALC-1] gi|159875629|gb|EDP69689.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [Flavobacteriales bacterium ALC-1] Length = 290 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 151/298 (50%), Positives = 209/298 (70%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+ ++VQG TG GTFH Q I Y T VVGG+ P KG +++ PVF Sbjct: 1 MSVLVNKNSNIIVQGFTGSEGTFHAGQMIEY-GTNVVGGVTPGKGGQT----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA E+ A+ ++I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DM++ ++ Sbjct: 56 TVSEAVEKVNADTTIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMIKAADYIKDR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP K+GIMPG +F+ G VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLVGPNCPGVITPGEAKVGIMPGFVFKSGRVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE++VM+GEIGG E +AA + K+ G KKP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLINDPETEAVVMIGEIGGQLEADAANWYKES---GSKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G A+ K M+ GI + SPA IG+ + E+LG Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSDDTAQAKKKIMRACGIHVVDSPAEIGKKVAEVLG 290 >gi|114706298|ref|ZP_01439200.1| succinyl-CoA synthetase alpha subunit [Fulvimarina pelagi HTCC2506] gi|114538159|gb|EAU41281.1| succinyl-CoA synthetase alpha subunit [Fulvimarina pelagi HTCC2506] Length = 298 Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 143/303 (47%), Positives = 206/303 (67%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+ K+TKV+VQG TGK GTFH E I Y T+VVGG+ P KG ++++PVF Sbjct: 1 MAVLLTKDTKVIVQGFTGKIGTFHAEDMIRY-GTKVVGGVTPSKGGQM----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 TV A E T A AS+++VPP A D+I+E+ +A I VCIT+GIP DM+RVK + Sbjct: 56 TVRGAVEETGAEASIVFVPPPFAADSIMEAADAGIKFCVCITDGIPAQDMMRVKRYMRRY 115 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ RL GPNC G+++P +GIMP +I+ +G +GI++RSGTL+YEA Q ++G+G Sbjct: 116 RQEDKMRLFGPNCAGMISPGHGFMGIMPTNIYEQGRIGIVARSGTLSYEAASQMLEKGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST++GIGGDP+ G+ F D LELF AD T+++VM+GEIGG E EAA++ A++ Sbjct: 176 VSTSIGIGGDPINGSSFKDCLELFEADPETDAVVMIGEIGGPQEAEAARW----AQKNMS 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+ ++AG +AP G+ MGHAGA++S A +KI MKE GI + P P+ G + E+ Sbjct: 232 KPVAAYIAGASAPKGKRMGHAGAIVSTEGESAAEKIEIMKECGIHVVPHPSAFGEVVEEM 291 Query: 297 LGS 299 +G+ Sbjct: 292 IGA 294 >gi|288931611|ref|YP_003435671.1| succinyl-CoA synthetase, subunit alpha [Ferroglobus placidus DSM 10642] gi|288893859|gb|ADC65396.1| succinyl-CoA synthetase, alpha subunit [Ferroglobus placidus DSM 10642] Length = 292 Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 144/289 (49%), Positives = 210/289 (72%), Gaps = 9/289 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I++D+NTK +VQG+TG G FHTE+ + Y T++V G+ P KG + G VPVF Sbjct: 1 MAIIIDENTKAIVQGITGSQGRFHTERMLAYG-TKIVAGVTPGKGGSEVLG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 V+EA E+T ANASVI+VP A DAI E++EA + ++VCITEGIPV D ++ R++++ Sbjct: 56 RVSEAVEKTGANASVIFVPAPFATDAIFEAVEAGVEVVVCITEGIPVYDELKAYKRVKEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG+++ +GIMP IF++G+VGI+SRSGTLTY+ + ++ G+GQST Sbjct: 116 GVILIGPNCPGVISVGKSHLGIMPTQIFKEGNVGIVSRSGTLTYQIAYNLTRLGIGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGD + G F+++LE+F D+ T+ +V++GEIGG+ EEEAA+F+ ++ KP+V Sbjct: 176 VGIGGDRIVGMSFVEILEMFEEDDQTDLVVLIGEIGGTDEEEAAKFI----EKKMSKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G++AG TAPPG+ MGHAGA+I GG+G AE KI A++E G+ + +P + Sbjct: 232 GYIAGITAPPGKRMGHAGAIIEGGRGTAESKIKALEEVGVEVGRTPMEV 280 >gi|315426476|dbj|BAJ48109.1| succinyl-CoA synthetase alpha subunit [Candidatus Caldiarchaeum subterraneum] gi|315427976|dbj|BAJ49566.1| succinyl-CoA synthetase alpha subunit [Candidatus Caldiarchaeum subterraneum] Length = 291 Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 145/298 (48%), Positives = 201/298 (67%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+ +T+VLVQG+TG+ G FHT +A+L T+V+ G+ P K G VPV+ Sbjct: 1 MAILVNDDTRVLVQGITGRQGAFHT-RAMLKYGTKVLAGVTPGKSGHSVEG----VPVYN 55 Query: 61 TVAEAKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA N S++ VP AGDA+IE+++A I L+V ITE +P+ D ++ Sbjct: 56 SVEEAMANYPEINTSMVMVPAPYAGDAVIEALDAGIKLVVVITEHVPIHDAMKFITYARL 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S ++GPNCPG++TP + K+GIMPG IF+KG VGI+SRSGTLTYE + +GLGQST Sbjct: 116 RGSNIVGPNCPGVITPGAAKVGIMPGHIFKKGVVGIVSRSGTLTYEIAHAITVKGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV G FIDVLE+F DE TE++V++GEIGG EE AA ++ K KP+ Sbjct: 176 CIGIGGDPVVGLNFIDVLEMFRRDEETEAVVLIGEIGGDLEERAADYI---VKTRYPKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V ++AG+TAPP + MGHAGA+IS G G K+ A+ +AG+ +A +P + LV+LL Sbjct: 233 VAYIAGRTAPPEKRMGHAGAIISLGAGDPASKVKALTQAGVHVASTPGEVADKLVQLL 290 >gi|261749652|ref|YP_003257338.1| succinyl-CoA synthetase subunit alpha [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497745|gb|ACX84195.1| succinyl-CoA synthetase, alpha subunit [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 296 Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 159/298 (53%), Positives = 207/298 (69%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+ +V+VQGLTGK G FHTEQ I Y T +VGG+ P KG + G VP+F Sbjct: 1 MSILIDKHIRVIVQGLTGKEGLFHTEQMINY-GTCIVGGVTPGKGGRKYLG----VPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T + SVI+VP A DAI+ESI + +IVCITEGIPV +M+++K L+ Sbjct: 56 TMYEAVSYTGGDVSVIFVPSFFASDAILESISMNMRVIVCITEGIPVSNMIQIKNFLKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPGI++P+ K+GIMP +F +KG VGI+SRSGTLTYEA Q Q G G ST Sbjct: 116 KPRLIGPNCPGIISPEESKVGIMPNLVFNKKGKVGIVSRSGTLTYEAADQIVQYGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGD + G D+L+LFL D T+ IVM+GEIGG E +AA++ ++ KKPI Sbjct: 176 AIGIGGDSIIGMTITDILDLFLKDTETKCIVMIGEIGGKLEIDAAEWWIKNSE--NKKPI 233 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +GF+AG+TAP GRTMGHAGAVI A+ K++ +K+ GI + SPA IG + E+L Sbjct: 234 IGFIAGQTAPKGRTMGHAGAVIGNKSETAQVKMDILKKNGIHVVISPADIGMKVHEVL 291 >gi|254571903|ref|XP_002493061.1| Alpha subunit of succinyl-CoA ligase [Pichia pastoris GS115] gi|238032859|emb|CAY70882.1| Alpha subunit of succinyl-CoA ligase [Pichia pastoris GS115] gi|328352924|emb|CCA39322.1| succinyl-CoA synthetase alpha subunit [Pichia pastoris CBS 7435] Length = 320 Score = 278 bits (712), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 164/296 (55%), Positives = 214/296 (72%), Gaps = 7/296 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V+ +TKV+ QG TGK GTFH +QAI Y TQVVGG +PKK G +PVF Sbjct: 22 NLQVNSSTKVIFQGFTGKQGTFHAQQAIDYG-TQVVGGTNPKKAGQLHLG----LPVFKN 76 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VA+A + A AS I+VPPS A AI E++EAEIPL VCITEGIP DM+RV L+ +S Sbjct: 77 VADAVRQAGATASGIFVPPSIAAAAIEEAVEAEIPLAVCITEGIPQHDMLRVADILKSQS 136 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P+ CKIGIMPG I +KG +GI+S+SGTLTYEAV QT+ GLGQ+ Sbjct: 137 KTRLVGPNCPGIIAPEQCKIGIMPGFIHKKGKIGIVSKSGTLTYEAVSQTTNVGLGQNLV 196 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE-AKRGRKKPI 239 +G+GGD + GT ++V+ L+L D E I+M+GEIGG+AE EAA+ +K + KP Sbjct: 197 IGVGGDSIPGTNLLEVVNLYLNDPEVEGIIMIGEIGGTAEIEAAELIKQHNSTVSVPKPF 256 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 V F+AG TAPPGR MGHAGA+ISGGKG A+ KI A++ AG+ ++PSP R+G+ L + Sbjct: 257 VSFIAGVTAPPGRRMGHAGAIISGGKGDAKSKIAALESAGVIVSPSPGRLGKLLYD 312 >gi|198433232|ref|XP_002123142.1| PREDICTED: similar to ATP-specific succinyl-CoA synthetase alpha subunit [Ciona intestinalis] Length = 333 Score = 278 bits (712), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 164/295 (55%), Positives = 212/295 (71%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I VD +TKV+ QG TGK GT+++ QAI Y T VVGG+ PKK T ++ +PVF Sbjct: 29 NIKVDSDTKVIYQGFTGKHGTYNSRQAIEY-GTNVVGGVSPKKAGT----SHLGLPVFKD 83 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 VAEA+E T A ASVI+VPP A DAI+E+I+AEIPL+VCITEGIP DMV+VK RLE+ Sbjct: 84 VAEAREATGAEASVIFVPPRFAADAIMEAIDAEIPLVVCITEGIPQQDMVKVKTRLEQQD 143 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPN PGI+ P CK+G+MPG I R G + I+SRSGTL YEAV G GQ+ Sbjct: 144 KTRLVGPNSPGIIVPGKCKLGVMPGHIHRGGEIAIVSRSGTLMYEAVDGIINAGFGQTIC 203 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D L++FL D+ TE I ++GEIG AEEEAA++LK KP+ Sbjct: 204 VGIGGDPFNGTNFVDCLDVFLKDDKTEGIFLIGEIGVEAEEEAAEYLKMNNVGKGAKPVA 263 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 ++AG TAPP R MGHAGA+I+GGKGGAE KI A+++AG+ + +PAR+G ++ Sbjct: 264 AYIAGVTAPPDRRMGHAGAIIAGGKGGAEGKIKALRDAGVNVTLNPARMGWVMLR 318 >gi|305666764|ref|YP_003863051.1| succinyl-CoA synthetase subunit alpha [Maribacter sp. HTCC2170] gi|88708988|gb|EAR01222.1| succinyl-CoA synthetase, alpha subunit [Maribacter sp. HTCC2170] Length = 290 Score = 278 bits (712), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 155/298 (52%), Positives = 206/298 (69%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG G PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIDY-GTNVVGGVTPGKGGQEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+ A+ ++I+VPP+ A DAI+E+ A I +I+ ITEGIPV DMV+ ++ Sbjct: 56 TVEEAVEKAGADTTIIFVPPAFAADAIMEAANAGIKVIITITEGIPVADMVKASDYIKDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP K+GIMPG +F+KG+VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLVGPNCPGVITPGEAKVGIMPGFVFKKGNVGIVSKSGTLTYEAADQVVRQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D T+ +VM+GEIGG E +AAQ+ K G KKPIV Sbjct: 176 IGIGGDPIIGTTTKEAVELLINDPETDCVVMIGEIGGQLEADAAQWYK---ASGSKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G A+ K M E GI + SPA IG + E++G Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSDDTAQAKKRIMSECGINVVDSPAEIGIKVKEVMG 290 >gi|11499134|ref|NP_070368.1| succinyl-CoA synthetase, alpha subunit (sucD-1) [Archaeoglobus fulgidus DSM 4304] gi|6647839|sp|O28733|SUCD1_ARCFU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha 1; AltName: Full=Succinyl-CoA synthetase subunit alpha 1; Short=SCS-alpha 1 gi|2649022|gb|AAB89707.1| succinyl-CoA synthetase, alpha subunit (sucD-1) [Archaeoglobus fulgidus DSM 4304] Length = 291 Score = 278 bits (711), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 139/297 (46%), Positives = 211/297 (71%), Gaps = 17/297 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 ++ILVD+NT+V+VQG+TG G+F ++ + Y T+VVGG+ P KG + G +PV+ Sbjct: 4 VAILVDENTRVIVQGITGFQGSFQAKRMLDY-GTKVVGGVTPGKGGSEVHG----IPVYN 58 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A+ S+IYVP A DAI E+ +A + L+VC+TEGIP+ D + + +L + Sbjct: 59 TVEEAVAETNADTSIIYVPARFATDAIFEAFDAGLRLVVCVTEGIPLYDEMLIHRKLREV 118 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S L+GPNCPG+++P K+G++P F +G++G++SRSGTLTY+ ++ G+GQST Sbjct: 119 KSMLLGPNCPGVISPGRSKVGLLPDRSFTQGNLGVVSRSGTLTYQICENLTKAGIGQSTV 178 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G F+DVL++F DE T+++++VGEIGG+AEE+AA+F+K + KP+V Sbjct: 179 VGIGGDPMPGLTFVDVLKMFEEDEETKAVLLVGEIGGTAEEKAAEFIKQMS-----KPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAPPG+ MGHAGA+I G G AE K+ A+++AG AR+ +L++++ Sbjct: 234 AFIAGRTAPPGKRMGHAGAIIEGSTGTAEAKMAALRDAG-------ARVAETLLDVV 283 >gi|307249681|ref|ZP_07531663.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858290|gb|EFM90364.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 218 Score = 278 bits (711), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 140/216 (64%), Positives = 169/216 (78%), Gaps = 5/216 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTKLVGGVSPNKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A ASVIYVP G DAI+E+I+A I LIVCITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVEKTGATASVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMICVKQKLKES 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPGI+TPD CKIGIMP I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGIITPDECKIGIMPAHIHKKGKIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIG 216 VGIGGDP+ G+ FID+L+LF AD TE+IVM+GEIG Sbjct: 176 VGIGGDPIPGSSFIDILKLFQADPETEAIVMIGEIG 211 >gi|319955636|ref|YP_004166903.1| succinyl-CoA synthetase, alpha subunit [Cellulophaga algicola DSM 14237] gi|319424296|gb|ADV51405.1| succinyl-CoA synthetase, alpha subunit [Cellulophaga algicola DSM 14237] Length = 290 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 154/298 (51%), Positives = 207/298 (69%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T +VGG+ P KG G PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIDY-GTNIVGGVTPGKGGQEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+ A+ ++I+VPP+ A DAI+E+ A I +I+ ITEGIPV DMV+ ++ Sbjct: 56 TVHEAVEKVGADTTIIFVPPAFAADAIMEAANAGIKVIITITEGIPVADMVKASNYIKDM 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG +F+KG+VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLIGPNCPGVITPGEAKVGIMPGFVFKKGNVGIVSKSGTLTYEAADQVVRQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +E+ + D TE +VM+GEIGG E +AA++ K G KKPIV Sbjct: 176 IGIGGDPIIGTTTKEAVEMLINDPETECVVMIGEIGGQLEPDAARWYK---ASGSKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G A+ K M+E GI + SPA IG + E++G Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSDDTAQAKKRIMRECGIHVVESPAEIGLKVKEVMG 290 >gi|114326717|ref|YP_743874.1| succinyl-CoA synthetase subunit alpha [Granulibacter bethesdensis CGDNIH1] gi|114314891|gb|ABI60951.1| succinyl-CoA synthetase alpha chain [Granulibacter bethesdensis CGDNIH1] Length = 298 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 146/301 (48%), Positives = 198/301 (65%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K TK+++QG TG GTFH + I Y T VVGG+ P KG G PVF Sbjct: 1 MSILINKQTKIIIQGFTGDKGTFHGREMIDYG-TNVVGGVTPGKGGQTHLG----RPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A AS+ +V P+ DAI+E +A + LI IT+GIP DM+RVK L + Sbjct: 56 TVEDAVRETGAQASITFVAPAFCADAIMEGADAGLELICTITDGIPAQDMMRVKRYLRRY 115 Query: 121 S----SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 +RL+GPNC GI++P +GIMPG I+++G VGI+SRSGTL YEA Q + G+G Sbjct: 116 QKDRRTRLVGPNCAGIISPGQAMLGIMPGHIYKEGHVGIVSRSGTLGYEAAAQLKELGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L+LF AD T +++M+GEIGG E EAA+++ + Sbjct: 176 VSTSVGIGGDPINGSSFLDHLQLFEADPETHAVLMIGEIGGPQEAEAAKWISENM----S 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VG+VAG TAP GR MGHAGA+ISG A +K M+ G+ +APSP +G ++ + Sbjct: 232 KPVVGYVAGLTAPKGRRMGHAGAIISGEGDSAAEKSEIMRSYGLTVAPSPGELGSTVAAV 291 Query: 297 L 297 L Sbjct: 292 L 292 >gi|303236675|ref|ZP_07323256.1| succinate-CoA ligase, alpha subunit [Prevotella disiens FB035-09AN] gi|302483179|gb|EFL46193.1| succinate-CoA ligase, alpha subunit [Prevotella disiens FB035-09AN] Length = 290 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 141/298 (47%), Positives = 201/298 (67%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+T+++VQG+TG+ G+FH + Y T VVGG P K G +PVF Sbjct: 1 MSILINKDTRLIVQGITGRDGSFHATKMKEYG-TNVVGGTSPGKAGQEVAG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A +T AN SVI+VP + A DA++E+ +A I LI+CITEG+P LD+V ++ Sbjct: 56 TVKDAVAKTNANTSVIFVPAAFAKDAMLEAADAGIKLIICITEGVPTLDVVEAYNYIKIK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++PD +GIMP +IF+KG G++SRSGTLTY+ V + G+GQS+A Sbjct: 116 GANLIGPNCPGLISPDESMVGIMPTNIFKKGHTGVISRSGTLTYQVVASLTAAGMGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDP+ G F ++LE+F D T+SI ++GEIGG AEE AA+++K KP+V Sbjct: 176 IGVGGDPIVGLYFQELLEMFQNDPETDSIALIGEIGGDAEERAAEYIKQYV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F++G+ AP G+ MGHAGA+IS G G A +K+ A + AGI +A I L + LG Sbjct: 232 AFISGREAPKGKQMGHAGAIISSGSGTAAEKVAAFEAAGIPVARETHEIPELLKQKLG 289 >gi|15790523|ref|NP_280347.1| hypothetical protein VNG1542G [Halobacterium sp. NRC-1] gi|169236261|ref|YP_001689461.1| succinate--CoA ligase (ADP-forming) alpha subunit [Halobacterium salinarum R1] gi|10581029|gb|AAG19827.1| succinyl-CoA synthetase alpha chain [Halobacterium sp. NRC-1] gi|167727327|emb|CAP14113.1| succinate--CoA ligase (ADP-forming) alpha subunit [Halobacterium salinarum R1] Length = 289 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 153/298 (51%), Positives = 206/298 (69%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD +T+V+VQG+TG G FH EQ I Y T VV G P KG G VPV+ Sbjct: 1 MSILVDDDTRVVVQGITGGEGKFHAEQMIEYG-TNVVAGAVPGKGGQEVAG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A A+ASV+ VPP+ A DA+ E+++ + L+V ITEGIP DM +V RL + Sbjct: 56 TVNQAVVAENADASVVLVPPAFAADAVFEALDTPLDLVVAITEGIPSQDMAKVYKRLSEV 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+TP K+GI+PG+IF G+VG++SRSGTLTY+ V + G+GQ+TA Sbjct: 116 DTRLLGPNCPGIITPGEAKLGILPGNIFEAGNVGLVSRSGTLTYQVVDSLTARGVGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT+FID LELF AD TE++VM GEIGG EE AA ++ + P+ Sbjct: 176 IGIGGDPIIGTDFIDALELFEADPETEAVVMCGEIGGEDEEAAAAYIDEH----MDTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G A+ KI+A+ +AG+ + +P + + ELL Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTADSKISALNDAGVPVGDTPEEVADDIEELL 289 >gi|284992794|ref|YP_003411348.1| succinyl-CoA synthetase subunit alpha [Geodermatophilus obscurus DSM 43160] gi|284066039|gb|ADB76977.1| succinyl-CoA synthetase, alpha subunit [Geodermatophilus obscurus DSM 43160] Length = 292 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 144/299 (48%), Positives = 204/299 (68%), Gaps = 7/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +++N+KV+VQG+TG G HT Q +L T +VGG++PKK VPVF Sbjct: 1 MSIFLNENSKVIVQGMTGSEGRKHT-QRMLASGTAIVGGVNPKKAGQSVDFDGAGVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 VAEA + T A+ SVI+VPP+GA +A+IE+++A+I L V ITEGIPV D A + Sbjct: 60 NVAEAMKETGADVSVIFVPPAGAKNAVIEAVDAQIGLAVVITEGIPVHDSTHFWAHAQGG 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S+R+IGPNCPG+++P GI+P +I ++G +G++S+SGTLTY+ +++ +G ST Sbjct: 120 STRIIGPNCPGLISPGRSNAGIIPANITKQGKIGLVSKSGTLTYQMMYELRD--IGFSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L+ F D TE+IVM+GEIGG AEE AA F++ KP+V Sbjct: 178 VGIGGDPVIGTTHIDCLQAFQDDPETEAIVMIGEIGGDAEERAADFIRANV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ R + E++G+ Sbjct: 234 GYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKQEALEAAGVRVGKTPSETARLMREIVGA 292 >gi|282879134|ref|ZP_06287893.1| succinate-CoA ligase, alpha subunit [Prevotella buccalis ATCC 35310] gi|281298776|gb|EFA91186.1| succinate-CoA ligase, alpha subunit [Prevotella buccalis ATCC 35310] Length = 288 Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 142/297 (47%), Positives = 197/297 (66%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ +TK++VQG+TG+ G+FH + Y T VVGG P K G +PVF Sbjct: 1 MSILINHDTKLIVQGITGRDGSFHATKMKEYG-TNVVGGTSPGKAGQEVAG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T AN SVI+VP + A DA++E+ +A I LI+CITEG+P LD+V + Sbjct: 56 TVKDAVKATGANTSVIFVPAAFAKDAMLEAADAGIQLIICITEGVPTLDVVEAYRYISDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++LIGPNCPG+++P+ +GIMP +IF+KG G++SRSGTLTY+ V + G GQSTA Sbjct: 116 GAKLIGPNCPGLISPEESMVGIMPTNIFKKGHTGVISRSGTLTYQVVADLTAAGFGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ G F D+LE+F D T+SI ++GEIGG AEE AA ++K KP+V Sbjct: 176 VGVGGDPIVGLYFQDLLEMFQNDPETDSIALIGEIGGDAEERAADYIKQHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F++G+ AP G+ MGHAGA+IS G G A +KI A + AG+ +A I L E + Sbjct: 232 AFISGREAPKGKQMGHAGAIISSGSGTAAEKIAAFEAAGVPVARETCEIPALLKERM 288 >gi|256272767|gb|EEU07738.1| Lsc1p [Saccharomyces cerevisiae JAY291] Length = 329 Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 151/304 (49%), Positives = 199/304 (65%), Gaps = 10/304 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ K+TKV+ QG TGK GTFH + Y T VVGG +PKK G PVF + Sbjct: 30 NLLLPKDTKVIFQGFTGKQGTFHASISQEYG-TNVVGGTNPKKAGQTHLGQ----PVFAS 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A AI ESIEAEIPL VCITEGIP DM+ + L+ + Sbjct: 85 VKDAIKETGATASAIFVPPPIAAAAIKESIEAEIPLAVCITEGIPQHDMLYIAEMLQTQD 144 Query: 121 SSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI+ P + +IGI P IF+ G +GI+SRSGTLTYEAV QT++ LGQS Sbjct: 145 KTRLVGPNCPGIINPATKVRIGIQPPKIFQAGKIGIISRSGTLTYEAVQQTTKTDLGQSL 204 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKP 238 +G+GGD GT+FID L+LFL DE TE I+M+GEIGG AE EAAQFLK+ R + P Sbjct: 205 VIGMGGDAFPGTDFIDALKLFLEDETTEGIIMLGEIGGKAEIEAAQFLKEYNFSRSKPMP 264 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG A G MGH+GA++ G AE K A+++ G+ + SP +G++L++ Sbjct: 265 VASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKQALRDVGVAVVESPGYLGQALLDQ 324 Query: 297 LGSL 300 Sbjct: 325 FAKF 328 >gi|256420259|ref|YP_003120912.1| succinyl-CoA synthetase, alpha subunit [Chitinophaga pinensis DSM 2588] gi|256035167|gb|ACU58711.1| succinyl-CoA synthetase, alpha subunit [Chitinophaga pinensis DSM 2588] Length = 293 Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 163/300 (54%), Positives = 215/300 (71%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+KV+VQG TG GTFH Q I Y TQVVGG+ P KG + +++ PVF Sbjct: 1 MSVLVNKNSKVIVQGFTGTEGTFHATQMIEY-GTQVVGGVTPGKGGSK----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A+ S+I+VPP A DAI+E+ EA I LIVCITEGIPV DM+R K L Sbjct: 56 TVDDAVKATGADVSIIFVPPGFAADAIMEAAEAGIALIVCITEGIPVQDMIRAKNFLVGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPG++T + K+GIMPG IF+KG++GI+S+SGTLTYEA Q + GLG STA Sbjct: 116 NSRLIGPNCPGVITAEEAKVGIMPGFIFKKGNIGIVSKSGTLTYEAADQVVKAGLGVSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT D +EL + D T I+M+GEIGGS E +AA+++K+ KP+V Sbjct: 176 IGIGGDPIIGTPTKDAVELLMNDPETVGIIMIGEIGGSMEADAAKWIKENG----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAPPGR MGHAGA+I G A K+ M E G+ + SPA IG+++ E+L ++ Sbjct: 232 GFIAGQTAPPGRRMGHAGAIIGGADDTAAAKMKIMAECGVHVVESPANIGKTMAEVLKAV 291 >gi|6324716|ref|NP_014785.1| Lsc1p [Saccharomyces cerevisiae S288c] gi|1711576|sp|P53598|SUCA_YEAST RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor gi|1164984|emb|CAA64059.1| YOR3352w [Saccharomyces cerevisiae] gi|1420358|emb|CAA99342.1| unnamed protein product [Saccharomyces cerevisiae] gi|285815021|tpg|DAA10914.1| TPA: Lsc1p [Saccharomyces cerevisiae S288c] Length = 329 Score = 275 bits (703), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 151/304 (49%), Positives = 199/304 (65%), Gaps = 10/304 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ K+TKV+ QG TGK GTFH + Y T VVGG +PKK G PVF + Sbjct: 30 NLLLPKDTKVIFQGFTGKQGTFHASISQEYG-TNVVGGTNPKKAGQTHLGQ----PVFAS 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A AI ESIEAEIPL VCITEGIP DM+ + L+ + Sbjct: 85 VKDAIKETGATASAIFVPPPIAAAAIKESIEAEIPLAVCITEGIPQHDMLYIAEMLQTQD 144 Query: 121 SSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI+ P + +IGI P IF+ G +GI+SRSGTLTYEAV QT++ LGQS Sbjct: 145 KTRLVGPNCPGIINPATKVRIGIQPPKIFQAGKIGIISRSGTLTYEAVQQTTKTDLGQSL 204 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKP 238 +G+GGD GT+FID L+LFL DE TE I+M+GEIGG AE EAAQFLK+ R + P Sbjct: 205 VIGMGGDAFPGTDFIDALKLFLEDETTEGIIMLGEIGGKAEIEAAQFLKEYNFSRSKPMP 264 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG A G MGH+GA++ G AE K A+++ G+ + SP +G++L++ Sbjct: 265 VASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKQALRDVGVAVVESPGYLGQALLDQ 324 Query: 297 LGSL 300 Sbjct: 325 FAKF 328 >gi|151945761|gb|EDN64002.1| ligase of succinyl-coa [Saccharomyces cerevisiae YJM789] gi|190407466|gb|EDV10733.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Saccharomyces cerevisiae RM11-1a] gi|207341121|gb|EDZ69263.1| YOR142Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|259149625|emb|CAY86429.1| Lsc1p [Saccharomyces cerevisiae EC1118] gi|323331502|gb|EGA72917.1| Lsc1p [Saccharomyces cerevisiae AWRI796] gi|323346554|gb|EGA80841.1| Lsc1p [Saccharomyces cerevisiae Lalvin QA23] gi|323352108|gb|EGA84645.1| Lsc1p [Saccharomyces cerevisiae VL3] Length = 329 Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 151/304 (49%), Positives = 199/304 (65%), Gaps = 10/304 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ K+TKV+ QG TGK GTFH + Y T VVGG +PKK G PVF + Sbjct: 30 NLLLPKDTKVIFQGFTGKQGTFHASISQEYG-TNVVGGTNPKKAGQTHLGQ----PVFAS 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A AI ESIEAEIPL VCITEGIP DM+ + L+ + Sbjct: 85 VKDAIKETGATASAIFVPPPIAAAAIKESIEAEIPLAVCITEGIPQHDMLYIAEMLQTQD 144 Query: 121 SSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI+ P + +IGI P IF+ G +GI+SRSGTLTYEAV QT++ LGQS Sbjct: 145 KTRLVGPNCPGIINPATKVRIGIQPPKIFQAGKIGIISRSGTLTYEAVQQTTKTDLGQSL 204 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKP 238 +G+GGD GT+FID L+LFL DE TE I+M+GEIGG AE EAAQFLK+ R + P Sbjct: 205 VIGMGGDAFPGTDFIDALKLFLEDETTEGIIMLGEIGGKAEIEAAQFLKEYNFSRSKPMP 264 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG A G MGH+GA++ G AE K A+++ G+ + SP +G++L++ Sbjct: 265 VASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKKALRDVGVAVVESPGYLGQALLDQ 324 Query: 297 LGSL 300 Sbjct: 325 FAKF 328 >gi|182416041|ref|YP_001821107.1| succinyl-CoA synthetase, alpha subunit [Opitutus terrae PB90-1] gi|177843255|gb|ACB77507.1| succinyl-CoA synthetase, alpha subunit [Opitutus terrae PB90-1] Length = 307 Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 154/302 (50%), Positives = 208/302 (68%), Gaps = 12/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV TK+L+QG+TG+ G HT+ ++ Y TQVV G+ P KG ++ VP+F Sbjct: 1 MSILVTPETKILIQGITGEFGARHTKLSLDY-GTQVVAGVTPGKGGQFFEHNGAKVPIFN 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V +A T A S I+VPP A DA++E ++AE+ L V ITEGIPV DMVRVK ++ Sbjct: 60 SVKDAAAATGATVSAIFVPPPFAADAVLECVDAELALAVAITEGIPVRDMVRVKRVMQGR 119 Query: 121 SSRLIGPNCPGILTP----DS---CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R++GPNCPGI+TP DS C+IGI PG I +KG VG++SRSGTLTYEAV+Q + Sbjct: 120 KTRVVGPNCPGIVTPGTGKDSSGGCRIGIAPGYIHKKGHVGVVSRSGTLTYEAVYQLTTR 179 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G+GQ+T+VGIGGDPV G+ +DV+++F D T I+M+GEIGG+AE EAA+++K Sbjct: 180 GIGQTTSVGIGGDPVNGSSHLDVIKMFNDDPETYGIIMIGEIGGNAEAEAARWIKANC-- 237 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KKP+ GF+AG TAP GR MGHAGAVI G + A KI KE GI +A +P+ + +L Sbjct: 238 --KKPVAGFIAGATAPAGRRMGHAGAVIGGKEDTAAAKIAIFKECGIEVAVTPSDMADAL 295 Query: 294 VE 295 + Sbjct: 296 IR 297 >gi|323302899|gb|EGA56703.1| Lsc1p [Saccharomyces cerevisiae FostersB] Length = 329 Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 151/304 (49%), Positives = 199/304 (65%), Gaps = 10/304 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ K+TKV+ QG TGK GTFH + Y T VVGG +PKK G PVF + Sbjct: 30 NLLLPKDTKVIFQGFTGKQGTFHASISQEYG-TNVVGGTNPKKAGQTHLGQ----PVFAS 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A AI ESIEAEIPL VCITEGIP DM+ + L+ + Sbjct: 85 VKDAIKETGATASAIFVPPPIAAAAIKESIEAEIPLAVCITEGIPQHDMLYIAEMLQTQD 144 Query: 121 SSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI+ P + +IGI P IF+ G +GI+SRSGTLTYEAV QT++ LGQS Sbjct: 145 KTRLVGPNCPGIINPATKVRIGIQPPKIFQAGKIGIISRSGTLTYEAVQQTTKTDLGQSL 204 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKP 238 +G+GGD GT+FID L+LFL DE TE I+M+GEIGG AE EAAQFLK+ R + P Sbjct: 205 VIGMGGDAFPGTDFIDALKLFLEDETTEGIIMLGEIGGKAEIEAAQFLKEYNFSRSKPMP 264 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG A G MGH+GA++ G AE K A+++ G+ + SP +G++L++ Sbjct: 265 VASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKKALRDVGVAVVESPGYLGQALLDQ 324 Query: 297 LGSL 300 Sbjct: 325 FAKF 328 >gi|289580417|ref|YP_003478883.1| succinyl-CoA synthetase subunit alpha [Natrialba magadii ATCC 43099] gi|289529970|gb|ADD04321.1| succinyl-CoA synthetase, alpha subunit [Natrialba magadii ATCC 43099] Length = 290 Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 159/299 (53%), Positives = 210/299 (70%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVD +T+V+VQG+TG G FH EQ I Y T VV G P KG G VPV+ Sbjct: 1 MSVLVDDDTRVVVQGITGGEGKFHAEQMIEYG-TNVVAGAVPGKGGQEAAG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E A+ SVI+VPP+ AGDAI E++++E+ L V ITEGIP DM +V RL ++ Sbjct: 56 TVHEAVEEENADTSVIFVPPAFAGDAIFEALDSELDLAVAITEGIPTQDMAKVNKRLSET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP K+GI+PG+IF G VG++SRSGTLTY+ V + G+GQ+TA Sbjct: 116 DTRLIGPNCPGLITPGEAKLGILPGNIFSDGKVGLVSRSGTLTYQVVDNLTNRGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT+F+D LELF D+ TE+IVM GEIGG EEEAA F+ + P+ Sbjct: 176 IGIGGDPIIGTDFVDALELFENDDETEAIVMCGEIGGEDEEEAAAFIDEHV----DTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPG+ MGHAGA++SG G G AE KI+A+ +AG+ + +P + + E LG Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAESKISALNDAGVPVGDTPEEVADHIEEFLG 290 >gi|184201463|ref|YP_001855670.1| succinyl-CoA synthetase subunit alpha [Kocuria rhizophila DC2201] gi|183581693|dbj|BAG30164.1| succinyl-CoA synthetase alpha chain [Kocuria rhizophila DC2201] Length = 305 Score = 275 bits (702), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 148/309 (47%), Positives = 210/309 (67%), Gaps = 19/309 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT + +L TQV+GG++ +K T + G V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHTAR-MLAAGTQVMGGVNARKAGTTVSHQDKDGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PV+ +V+EA + T ANAS+++VPP+ DA+IE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVYGSVSEAMKETGANASIVFVPPAFCKDAVIEAIDAEIPLVVVITEGIPVQDSAEFWA 119 Query: 116 RLE-------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + K +R+IGPNCPGI++P+ +GI P +I KG +G++S+SGTLTY+ ++ Sbjct: 120 HSQANTGADGKPKTRIIGPNCPGIISPEESLLGITPANITGKGKLGLVSKSGTLTYQMMY 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + LG +TA+GIGGDPV GT ID LE F AD TE+IVM+GEIGG AEE AA F+K Sbjct: 180 ELRD--LGFTTAIGIGGDPVIGTTHIDALEAFEADPETEAIVMIGEIGGDAEERAADFIK 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 238 ANV----TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSE 293 Query: 289 IGRSLVELL 297 + + E+ Sbjct: 294 TAQLMREIF 302 >gi|51893670|ref|YP_076361.1| succinyl-CoA synthetase alpha subunit [Symbiobacterium thermophilum IAM 14863] gi|51857359|dbj|BAD41517.1| succinyl-CoA synthetase alpha subunit [Symbiobacterium thermophilum IAM 14863] Length = 290 Score = 275 bits (702), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 141/290 (48%), Positives = 197/290 (67%), Gaps = 10/290 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++++D+NT+ +VQG+TG G FHT Q + + T +VGG++ KK G VPVF Sbjct: 1 MAVIIDRNTRAIVQGITGSQGQFHTGQMLAFG-TNIVGGVNFKKAGQQVQG----VPVFA 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T ANASV++VP G DA E+I A I ++V I E +P + + + A ++ Sbjct: 56 TVHEAVEKTGANASVMFVPAPGVKDAAFEAIHAGIKVLVLIPEHVPTQETMEIMAYAKRH 115 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPN GI++P + CK+GIMP I++ G VGI++RSGTL+YE F S GLGQ+T Sbjct: 116 GVRVIGPNTFGIISPGEKCKLGIMPNHIYKPGPVGIVARSGTLSYEIAFNLSNAGLGQTT 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +G+GGD V GT F+D LELF AD ATE+IVMVGEIGG EE AA+++K +KP+ Sbjct: 176 VIGMGGDRVIGTNFVDALELFNADPATEAIVMVGEIGGIQEELAAEYIKQHV----RKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 V ++AGK+APPG+ MGHAGA+I G +G + K+ A+ AG+ +A P I Sbjct: 232 VAYLAGKSAPPGKRMGHAGAIIEGNRGTYQSKVEALTAAGVKVAALPWEI 281 >gi|323335536|gb|EGA76821.1| Lsc1p [Saccharomyces cerevisiae Vin13] Length = 329 Score = 274 bits (701), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 151/304 (49%), Positives = 199/304 (65%), Gaps = 10/304 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ K+TKV+ QG TGK GTFH + Y T VVGG +PKK G PVF + Sbjct: 30 NLLLPKDTKVIFQGFTGKQGTFHASISQEYG-TNVVGGTNPKKAGQTHLGQ----PVFAS 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A AI ESIEAEIPL VCITEGIP DM+ + L+ + Sbjct: 85 VKDAIKETGATASAIFVPPPIAAAAIKESIEAEIPLAVCITEGIPQHDMLYIAEMLQTQD 144 Query: 121 SSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI+ P + +IGI P IF+ G +GI+SRSGTLTYEAV QT++ LGQS Sbjct: 145 KTRLVGPNCPGIINPATKVRIGIQPPKIFQAGKIGIISRSGTLTYEAVQQTTKTDLGQSL 204 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKP 238 +G+GGD GT+FID L+LFL DE TE I+M+GEIGG AE EAAQFLK+ R + P Sbjct: 205 VIGMGGDAFPGTDFIDALKLFLEDETTEGIIMLGEIGGKAEIEAAQFLKEYNFSRSKPMP 264 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG A G MGH+GA++ G AE K A+++ G+ + SP +G++L++ Sbjct: 265 VASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKKALRDVGVXVVESPGYLGQALLDQ 324 Query: 297 LGSL 300 Sbjct: 325 FAKF 328 >gi|269986366|gb|EEZ92663.1| succinyl-CoA synthetase, alpha subunit [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 288 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 146/295 (49%), Positives = 199/295 (67%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNT+VLVQG+TG G FH+ +A+L T+VV G+ P KG G V VF Sbjct: 1 MAILMDKNTRVLVQGITGHQGRFHS-KAMLELGTKVVAGVTPGKGGQRVNG----VRVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V+EA E+T AN+SVI+VP S D++IE+I++ I LI ITE +P DM+R++ Sbjct: 56 SVSEAVEKTGANSSVIFVPASLTEDSVIEAIDSGIKLITIITEHVPFQDMLRIRDYANMH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPGI P K+GI+P S +KGSVG++SRSGTLTYE V ++ G+G+ST Sbjct: 116 GVTIIGPNCPGIAVPGVGKLGIIPNSTLKKGSVGVISRSGTLTYEIVNVLTENGMGESTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGD V G FID L LF D T+++V+VGEIGG EE+AA+F+++ G KP+V Sbjct: 176 LGIGGDKVPGISFIDALRLFKQDGQTKAVVIVGEIGGDEEEKAAEFIRN----GFDKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+ G APPG+ MGHAGA+ISG G AE K+ A ++A + +A + I LV Sbjct: 232 AFIDGIYAPPGKRMGHAGAIISGKTGTAESKLKAFEKANVPVAKNFKEIATYLVN 286 >gi|325958385|ref|YP_004289851.1| succinyl-CoA synthetase subunit alpha [Methanobacterium sp. AL-21] gi|325329817|gb|ADZ08879.1| succinyl-CoA synthetase, alpha subunit [Methanobacterium sp. AL-21] Length = 286 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 140/295 (47%), Positives = 202/295 (68%), Gaps = 10/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I++D+NT+ +VQG+TGK G+FH EQ + Y T +V G P KG + G +P++ ++ Sbjct: 2 IILDENTRCIVQGITGKQGSFHAEQMLKY-NTNIVAGTSPGKGGQNFNG----LPIYNSI 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EAK+ NAS+I+VP S A DA E+I +++ L V ITE IPV D + + +K ++ Sbjct: 57 EEAKDELDINASIIFVPASFAKDAAFEAI-SQLDLAVIITEHIPVHDSMEIVEYAKKENT 115 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PGI++P K+GIMP IF +G++GI+SRSGTLTYE Q + G+GQST VG Sbjct: 116 IVIGPNTPGIISPGIGKLGIMPTHIFNEGNIGIVSRSGTLTYEVANQVTNAGMGQSTCVG 175 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV G +F DVL+ F D+ T ++VM+GEIGG+AEE AA ++K+ KP++ + Sbjct: 176 IGGDPVVGLDFADVLQRFEDDDDTAAMVMIGEIGGNAEEMAADYIKENI----SKPVIAY 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG TAPPG+ MGHAGA+I G G AE KINA++++G +A P+ I + +L+ Sbjct: 232 IAGVTAPPGKRMGHAGAIIEGDAGTAETKINALEKSGAHVADRPSEIADLIWDLI 286 >gi|76802811|ref|YP_330906.1| succinate--CoA ligase (ADP-forming), alpha subunit [Natronomonas pharaonis DSM 2160] gi|76558676|emb|CAI50268.1| succinate--CoA ligase (ADP-forming), alpha subunit [Natronomonas pharaonis DSM 2160] Length = 289 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 150/298 (50%), Positives = 208/298 (69%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD +T+V+VQG+TG G FHT Q + Y T VV G P +G G VPV+ Sbjct: 1 MSILVDNDTRVVVQGITGGEGKFHTGQMLEYG-TNVVAGAVPGRGGQEVEG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ANA+V++VPP+ A DA+ E++++ + L+V ITEGIP DM +V +L ++ Sbjct: 56 TVHKAAREEDANAAVVFVPPAFAADALFEALDSPVDLVVAITEGIPQQDMAKVYRKLRET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG++TP K+GI+PG+IF +G+VG++SRSGTLTY+ V +Q G+GQ+TA Sbjct: 116 DTNLIGPNCPGLITPGEAKLGILPGNIFAEGNVGLVSRSGTLTYQVVDSLTQRGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT+F+D LE+F D TE++VM GEIGG EEEAA+F+ P+ Sbjct: 176 VGIGGDPIIGTDFVDALEMFENDPDTEAVVMCGEIGGEDEEEAAEFI----GANMDTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G AE KINA+ AG+ + +P + ++ L Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAESKINALNNAGVPVGDTPEEVADNIESFL 289 >gi|53803923|ref|YP_114180.1| succinyl-CoA synthase subunit alpha [Methylococcus capsulatus str. Bath] gi|53757684|gb|AAU91975.1| succinyl-CoA synthase, alpha subunit [Methylococcus capsulatus str. Bath] Length = 300 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 146/296 (49%), Positives = 202/296 (68%), Gaps = 6/296 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV-NVPVF 59 MS+ V+K++KV+ QG TG+ TFH + A + T+VVGG+ P KG T + ++PVF Sbjct: 1 MSVFVNKHSKVIFQGFTGEHATFHAKDA-MRMGTRVVGGVTPGKGGTRHPDPELAHLPVF 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAEA T A+ S ++VPP DA++E+I+A I + V I +GIPV DM+R++ Sbjct: 60 DTVAEAVAATGADVSAVFVPPPFNADALMEAIDAGIRVAVTIADGIPVHDMIRLQRYRVG 119 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S +IGPN PGI+TP CK+GIMP I++KG+VGI+SRSGTL YEA Q + GLG +T Sbjct: 120 KDSIVIGPNTPGIITPGECKVGIMPSHIYKKGNVGIVSRSGTLNYEATEQMAALGLGITT 179 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +VGIGGDP+ GT+F+ VL F AD TE +VM+GEIGG E AA++ AK KP+ Sbjct: 180 SVGIGGDPINGTDFVTVLRAFEADPETEIVVMIGEIGGPQEVAAARW----AKENMTKPV 235 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 +GFVAG AP GR MGHAGA+IS A K++AM+ G+ +A +PA+IG++++ Sbjct: 236 IGFVAGLAAPTGRRMGHAGAIISSEADTAGAKMDAMEALGLYVARNPAQIGQTVLR 291 >gi|110227027|gb|ABG56533.1| ScsA [Penicillium marneffei] Length = 266 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 156/261 (59%), Positives = 200/261 (76%), Gaps = 7/261 (2%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 T+VVGG +PKK T ++++PVF TV++A + T A AS I+VPP A I E+I A Sbjct: 2 TKVVGGTNPKKAGTT----HLDLPVFATVSDAVKETGATASAIFVPPPLAAAGIEEAIAA 57 Query: 94 EIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 EIPL+VCITEGIP DMVR+ L+ + +RL+GPNCPGI+ P CKIGIMPG I ++G Sbjct: 58 EIPLVVCITEGIPQHDMVRITDILKTQDKTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGR 117 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 +GI+SRSGTLTYEAV QT+Q GLGQS VGIGGDP GT FID L++FL DE T+ I+M+ Sbjct: 118 IGIVSRSGTLTYEAVNQTTQAGLGQSLVVGIGGDPFSGTNFIDCLKVFLEDEETDGIIMI 177 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 GEIGGSAEE+AA+FLK E K + KP V F+AG +APPGR MGHAGA++SGGKGGA+ KI Sbjct: 178 GEIGGSAEEDAAEFLKSENK--KNKPTVSFIAGISAPPGRRMGHAGAIVSGGKGGADSKI 235 Query: 273 NAMKEAGICIAPSPARIGRSL 293 +A++ AG+ + SPA +G++L Sbjct: 236 SALEAAGVIVERSPASLGKTL 256 >gi|195162297|ref|XP_002021992.1| GL14403 [Drosophila persimilis] gi|194103890|gb|EDW25933.1| GL14403 [Drosophila persimilis] Length = 323 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 147/295 (49%), Positives = 206/295 (69%), Gaps = 23/295 (7%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K TK+LVQG TGK TFH+++A+ Y T VVGG+ PKKG T +++ PVF + Sbjct: 31 NLKINKETKLLVQGFTGKQATFHSQEALKY-GTNVVGGVSPKKGGTK----HLDKPVFKS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + +A+VI++PPS A D I +IE+EI LIV ITEGIP +DMVR+ L + Sbjct: 86 VAEATKELKPDATVIFIPPSNAADGIRSAIESEIGLIVAITEGIPQVDMVRIMQMLNCQE 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++PD CKIGIMPG I ++G T++ GLGQ+ Sbjct: 146 KSRLLGPNCPGIISPDQCKIGIMPGDIHKRGC-----------------TTKTGLGQTLC 188 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G GGDP GT FID L++FL+D T+ I+++GEIGGSAEE+AA+FLK + KP+V Sbjct: 189 IGCGGDPFNGTNFIDGLKIFLSDPETKGIILIGEIGGSAEEDAAEFLKQHNSGCKAKPVV 248 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG+TAPPGR MGHAGA+I+GGKG A K+ A+++AG+ ++ +P +G +L + Sbjct: 249 SFIAGQTAPPGRRMGHAGAIIAGGKGTAPAKVKALEKAGVIVSQNPCHMGSTLYK 303 >gi|220926858|ref|YP_002502160.1| succinyl-CoA synthetase subunit alpha [Methylobacterium nodulans ORS 2060] gi|219951465|gb|ACL61857.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium nodulans ORS 2060] Length = 297 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 146/303 (48%), Positives = 200/303 (66%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T +L+QG+TG G+FH ++ I Y + VVGG+ P KG G +PVF Sbjct: 1 MSILIDEKTPILIQGITGDKGSFHAKEMIEYG-SNVVGGVTPGKGGRSHLG----IPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV +A ++T A AS+ +V P A DAI+E+ +A I LI IT+GIP DM+RVK L++ Sbjct: 56 TVKDAVKQTGATASITFVAPPFAADAIMEAADAGIRLICSITDGIPAQDMMRVKRYLKRY 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S ++GPNC GI++P +GIMPG I+ KG+VG++SRSGTL YEA Q GLG Sbjct: 116 PKERRSMVVGPNCAGIISPGKSMLGIMPGHIYLKGNVGVISRSGTLGYEAASQMKAVGLG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L LF D T++++M+GEIGG E EAA ++K+ Sbjct: 176 ISTSVGIGGDPINGSSFLDHLALFEQDPETDAVLMIGEIGGPQEAEAAAWIKEN----MS 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGFVAG TAP GR MGHAGA+IS A +K M+ G+ +APSP G ++ + Sbjct: 232 KPVVGFVAGLTAPKGRRMGHAGAIISAAGDSAAEKAEIMRSYGLTVAPSPGEFGATMARV 291 Query: 297 LGS 299 + S Sbjct: 292 MES 294 >gi|13471374|ref|NP_102940.1| succinyl-CoA synthetase subunit alpha [Mesorhizobium loti MAFF303099] gi|14022116|dbj|BAB48726.1| succinyl-CoA synthetase alpha subunit [Mesorhizobium loti MAFF303099] Length = 299 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 143/304 (47%), Positives = 202/304 (66%), Gaps = 13/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++++T+V+VQG TGK G+FH E Y T++VGG+ P KG G +PVF Sbjct: 1 MAILLNRSTRVIVQGFTGKIGSFHAEDMKRYG-TKLVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV A T A AS+++VPP A D+I+E+ +A I L VCIT+GIP DM++VK + + Sbjct: 56 TVKGAVRETRAEASIVFVPPPFAADSIMEAADAGIKLCVCITDGIPSQDMMQVKRYMRRY 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 RLIGPNC G++TP +GIMPGSI+ G VGI+ RSGTL YEA Q G+G Sbjct: 116 RFEDRMRLIGPNCAGMITPGQALMGIMPGSIYLPGRVGIVGRSGTLGYEAASQMKALGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+L+LF D+ T+++VM+GEIGG E EAA + +D + Sbjct: 176 VSTSVGIGGDPINGSSFKDILKLFEQDDETDAVVMIGEIGGPQEAEAAIWARDNM----R 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ ++AG +AP GR MGHAGA+IS A++K+ +KEAG+ I P+P+ G + + Sbjct: 232 KPLIAYIAGLSAPKGRRMGHAGAIISAFGESAQEKVEILKEAGVIIVPTPSSFGEVVADT 291 Query: 297 LGSL 300 L + Sbjct: 292 LARM 295 >gi|170744592|ref|YP_001773247.1| succinyl-CoA synthetase subunit alpha [Methylobacterium sp. 4-46] gi|168198866|gb|ACA20813.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium sp. 4-46] Length = 299 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 146/301 (48%), Positives = 198/301 (65%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T +L+QG+TG G+FH ++ I Y + VVGG+ P KG G +PVF Sbjct: 1 MSILIDEKTPILIQGITGDKGSFHAKEMIEYG-SNVVGGVTPGKGGRSHLG----IPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA +T A S+ +V P A DAI+E+ +A I LI IT+GIP DM+RVK L++ Sbjct: 56 TVKEAVRQTGATTSITFVAPPFAADAIMEAADAGIRLICSITDGIPAQDMMRVKRYLKRY 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S ++GPNC GI++P +GIMPG I+ KG+VG++SRSGTL YEA Q GLG Sbjct: 116 PKERRSMVVGPNCAGIISPGKSMLGIMPGHIYLKGNVGVISRSGTLGYEAASQMKAVGLG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L LF D T++++M+GEIGG E EAA ++KD Sbjct: 176 ISTSVGIGGDPINGSSFLDHLALFEEDPETDAVLMIGEIGGPQEAEAAAWIKDNM----S 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGFVAG TAP GR MGHAGA+IS A +K M+ G+ +APSP G ++ ++ Sbjct: 232 KPVVGFVAGLTAPKGRRMGHAGAIISAVGDSAAEKAEIMRSYGLTVAPSPGEFGSTMAKV 291 Query: 297 L 297 + Sbjct: 292 M 292 >gi|325954133|ref|YP_004237793.1| succinyl-CoA synthetase, subunit alpha [Weeksella virosa DSM 16922] gi|323436751|gb|ADX67215.1| succinyl-CoA synthetase, alpha subunit [Weeksella virosa DSM 16922] Length = 289 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 160/298 (53%), Positives = 213/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+K++K++VQG TGK GTFH EQ I Y TQVVGG P KG T G PVF Sbjct: 1 MAVLVNKDSKIIVQGFTGKEGTFHAEQMIEY-GTQVVGGTTPGKGGTEHLGR----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A+ S+I+VPP+ A DA++E+ +A I +I+CITEGIPV DMV+V+A +++ Sbjct: 56 TVREAVKETGADVSIIFVPPAFAADAVMEAADAGIRVIICITEGIPVEDMVKVQAYVDQR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++T K+GIMPG IF+ G VGI+S+SGTLTYEA Q + G G STA Sbjct: 116 DVTLIGPNCPGVITSGEAKVGIMPGFIFKPGKVGIVSKSGTLTYEAADQVVKAGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +ELF+ D TE IVM+GEIGG E EAA+++K+ KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELFMNDPETECIVMIGEIGGQLEAEAARWIKEHG----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + A+ K+ M E GI + SPA IG ++ ++LG Sbjct: 232 GFIAGQTAPKGRTMGHAGAIVGGAEDTAQAKMKIMAECGIHVVESPAHIGETVAKVLG 289 >gi|254512676|ref|ZP_05124742.1| succinyl-CoA ligase [GDP-forming] subunit alpha-2 [Rhodobacteraceae bacterium KLH11] gi|221532675|gb|EEE35670.1| succinyl-CoA ligase [GDP-forming] subunit alpha-2 [Rhodobacteraceae bacterium KLH11] Length = 295 Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 145/295 (49%), Positives = 202/295 (68%), Gaps = 8/295 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI VD NT+V+VQG+TG+AGTF+T+QA+ Y T VGG+ P KG T ++++P+F Sbjct: 1 MSIFVDANTRVIVQGMTGRAGTFYTDQAVRYGST-YVGGVRPGKGGTR----HLDMPMFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T ANAS++ VP A +A+IE+IEA I +IVC+TE +P DM RVKA LE + Sbjct: 56 TVAEAMTETGANASLVIVPAPHAAEAMIEAIEAGIGVIVCVTERVPQHDMSRVKAALEGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPN GILTP+ CKIG+MP + GSVGI SRS +LT E + Q S+ G+GQST Sbjct: 116 DCVLIGPNSQGILTPEQCKIGVMPTRNAQPGSVGIASRSASLTSEILAQFSKAGMGQSTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGD + G +F++ L+ F D TE++V++GEIGG +EE+AA++L+ KP++ Sbjct: 176 VGIGGDTLHGVDFVECLKRFRDDAETEAVVLIGEIGGRSEEDAAEYLR---SVDYGKPVI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 V G+ AP GR MGHAG + G A++KI ++ AG+ IA + + S+++ Sbjct: 233 ALVVGRHAPKGRRMGHAGTLSVLGGDSAQEKIANLRNAGVFIADNADDVVASVLQ 287 >gi|298244137|ref|ZP_06967943.1| succinyl-CoA synthetase, alpha subunit [Ktedonobacter racemifer DSM 44963] gi|297551618|gb|EFH85483.1| succinyl-CoA synthetase, alpha subunit [Ktedonobacter racemifer DSM 44963] Length = 288 Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 154/283 (54%), Positives = 200/283 (70%), Gaps = 9/283 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+V+VQG+TG+ G +HT I T VVGG+ P KG G VPVF Sbjct: 1 MSILLDKSTRVIVQGITGREGQYHTHNMIA-AGTTVVGGVTPGKGGQEVEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+AK RT ANA+ I+VPP+GA DAI E+ A I LIVCITEGIPV+DM R + + Sbjct: 56 TVAQAKARTDANATCIFVPPAGAADAIEEAAYAGIELIVCITEGIPVVDMTRAILAVREK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+ TP KIGI+P +F G VG +SRSGTLTYE V + EGLGQST Sbjct: 116 GATLIGPNCPGLCTPGHGKIGIIPYGMFTPGPVGFISRSGTLTYEVVSLLTNEGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G+ F D L+ F D TE +VM GEIGGS EE+AA++++ + KKP+V Sbjct: 176 IGIGGDPIIGSTFADYLKRFDEDPQTEVVVMCGEIGGSDEEDAAEYIRTQ----MKKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 F++G+TAPPG+ MGHAGA++SG G A+ K+ A++ AG+ +A Sbjct: 232 AFISGRTAPPGKRMGHAGAIVSGNTGTAQGKVEALQAAGVPVA 274 >gi|325927499|ref|ZP_08188738.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas perforans 91-118] gi|325542126|gb|EGD13629.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas perforans 91-118] Length = 237 Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 148/246 (60%), Positives = 185/246 (75%), Gaps = 11/246 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG T ++N+PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGTT----HINLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVQATGADASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HPDTVLIGPNCPGVITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K+ KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKNHV----KKP 231 Query: 239 IVGFVA 244 +VGF+A Sbjct: 232 VVGFIA 237 >gi|257388753|ref|YP_003178526.1| succinyl-CoA synthetase, subunit alpha [Halomicrobium mukohataei DSM 12286] gi|257171060|gb|ACV48819.1| succinyl-CoA synthetase, alpha subunit [Halomicrobium mukohataei DSM 12286] Length = 289 Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 147/298 (49%), Positives = 207/298 (69%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVD++T+V+VQG+TG G FHTEQ + Y T VV G P +G G VPV+ Sbjct: 1 MSVLVDEDTRVVVQGITGGEGKFHTEQMMEYG-TNVVAGAVPGRGGQEVAG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A AN +V++VPP+ AGDA+ E+++A + L+V ITEGIP DM RVK + +++ Sbjct: 56 TVDRAAREENANTAVVFVPPAFAGDALFEALDAPVDLVVAITEGIPTQDMSRVKRKQDET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPG++TP K+GI+PG+IF G VG++SRSGTLTY+ V + +GQSTA Sbjct: 116 DTHLVGPNCPGVITPGVAKLGILPGNIFSSGDVGLVSRSGTLTYQVVDNLTNRDIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID LELF AD T+++VM GEIGG EE+AA+++ + P+ Sbjct: 176 IGIGGDPIIGTSFIDALELFEADPDTKAVVMCGEIGGEDEEQAARYIGEH----MDTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G AE KI A++ G+ + +P + + ++L Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAESKIEALESNGVPVGDTPEEVVDHVEDIL 289 >gi|149201847|ref|ZP_01878821.1| succinyl-CoA synthetase subunit alpha [Roseovarius sp. TM1035] gi|149144895|gb|EDM32924.1| succinyl-CoA synthetase subunit alpha [Roseovarius sp. TM1035] Length = 294 Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 140/301 (46%), Positives = 197/301 (65%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I++DKN++VLV GLTG+ G+FHT+ I + T VVGG+ P KG T G +PVF Sbjct: 2 MAIIIDKNSRVLVTGLTGRIGSFHTQDMINH-GTNVVGGVTPGKGGTKHNG----LPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A T A+ + +VPP A D+I+E+ +A I VCI +GIP DM++VK + + Sbjct: 57 TVKGAVAETGADLVICFVPPPFAADSIMEAADAGITTCVCIADGIPASDMIKVKRYMRRY 116 Query: 121 SS----RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + RLIGPNC GI+TP G+MP I++ G VGI+ RSGTL YEA Q + G+G Sbjct: 117 KAEKRMRLIGPNCAGIITPGQAFAGLMPPHIYKPGRVGIIGRSGTLGYEAASQMKERGIG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+LELF DE T+++VMVGEIGG E EAA +++D Sbjct: 177 VSTSVGIGGDPINGSSFRDILELFENDEGTDAVVMVGEIGGPQEAEAAAYIRDHM----S 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+ ++AG +AP GR MGHAGA++S A++K+ + EAG+ I P+P+ G + + Sbjct: 233 KPVAAYIAGLSAPKGRRMGHAGAIVSAFGESAQEKVEILSEAGVTIVPTPSSFGEVVARM 292 Query: 297 L 297 + Sbjct: 293 V 293 >gi|302348870|ref|YP_003816508.1| Succinyl-CoA synthetase alpha chain [Acidilobus saccharovorans 345-15] gi|302329282|gb|ADL19477.1| Succinyl-CoA synthetase alpha chain [Acidilobus saccharovorans 345-15] Length = 293 Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 147/298 (49%), Positives = 200/298 (67%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M I+VD+NTKV+VQG+TG+ G+FHT + Y T+VV G+ P KG T G VPV+ Sbjct: 1 MGIIVDENTKVIVQGITGREGSFHTRLMLQYG-TKVVAGVTPGKGGTTVEG----VPVYD 55 Query: 61 TVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 T+ EA K AN S+I+VP A DA+ E+I+A I IV ITE IP+ D + ++ Sbjct: 56 TMDEAVKAHPDANTSIIFVPAKFAADAVFEAIDAGIKTIVVITEHIPIHDAMAFVNYAKE 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S +IGPNCPGI+ P K+GIMP ++F G VG++SRSGTLTYE + S+ GLGQST Sbjct: 116 KGSIIIGPNCPGIINPGKTKVGIMPANVFTPGPVGVMSRSGTLTYEVSYFLSKAGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +G+GGDP+ G F +V E+F D T++IVMVGEIGG AEE A+ +K+ R KPI Sbjct: 176 VIGVGGDPITGLTFPEVAEMFERDPQTKAIVMVGEIGGDAEERVAKMVKEGKIR---KPI 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V F+AG+TAP G+ MGHAGA+I G G +DK+ A+++AG+ +A +P I + + E L Sbjct: 233 VAFIAGRTAPEGKRMGHAGAIIMLGTGAYKDKVAALEDAGVRVAITPYEIPKLVSEAL 290 >gi|312138583|ref|YP_004005919.1| succinyl-CoA synthetase alpha subunit [Rhodococcus equi 103S] gi|325676350|ref|ZP_08156029.1| succinyl-CoA synthetase subunit alpha [Rhodococcus equi ATCC 33707] gi|311887922|emb|CBH47234.1| succinyl-CoA synthetase alpha subunit [Rhodococcus equi 103S] gi|325552911|gb|EGD22594.1| succinyl-CoA synthetase subunit alpha [Rhodococcus equi ATCC 33707] Length = 300 Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 151/307 (49%), Positives = 209/307 (68%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 M+I + K++KV+VQG+TG GT HT +L TQVVGG++ +K T + G V Sbjct: 1 MAIFLTKDSKVIVQGITGGEGTKHT-ALMLKAGTQVVGGVNARKAGTTVSHTDKDGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TVAEA + T A+ S+ +VPP+ + DAI+E+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFATVAEAMKETGADVSIAFVPPAFSKDAIVEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +EK + +R+IGPNCPGI+TP+ +GI P +I KG VG++S+SGTLTY+ +F+ + Sbjct: 120 YNVEKGNKTRIIGPNCPGIITPEEALVGITPANIAGKGPVGLVSKSGTLTYQMMFELREY 179 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 180 GF--STAIGIGGDPVIGTTHIDAIEAFEKDPETKLIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K +A++ AG+ + +P+ Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKDALEAAGVKVGKTPSETAALA 293 Query: 294 VELLGSL 300 E+L +L Sbjct: 294 REILQNL 300 >gi|156838644|ref|XP_001643024.1| hypothetical protein Kpol_440p13 [Vanderwaltozyma polyspora DSM 70294] gi|156113611|gb|EDO15166.1| hypothetical protein Kpol_440p13 [Vanderwaltozyma polyspora DSM 70294] Length = 328 Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 149/304 (49%), Positives = 201/304 (66%), Gaps = 10/304 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ TKV+ QG TGK TFH E + Y T VVGG +PKK G PVF T Sbjct: 29 NLLIPNGTKVIFQGFTGKQATFHAEISQKYG-TDVVGGTNPKKAGQTHLGQ----PVFAT 83 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + T A AS I++PP A AI E++EAEIPL V +TEGIP DM+ + L+ + Sbjct: 84 VAEAVKETGATASGIFIPPPFAAAAIKEAVEAEIPLAVAVTEGIPQHDMLYIAEMLKSQD 143 Query: 121 SSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI+ P S +IGI P SIF+ G +GI+S+SGTLTYEAV QT+ GLGQ+ Sbjct: 144 KTRLVGPNCPGIVNPVSKVRIGIQPTSIFKPGKIGIISKSGTLTYEAVQQTTLTGLGQTL 203 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKP 238 +G+GGD GT+FID L+LFL D+ATE I+M+GEIGG+AE EAA++LK+ R KP Sbjct: 204 VIGMGGDAFPGTDFIDSLQLFLEDDATEGIIMLGEIGGTAELEAAEYLKEFNNSRAVPKP 263 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG A G MGH+GA++ G AE K A+++ G+ + SP +G++L++ Sbjct: 264 VASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKRALRDVGVAVVESPGHLGKALLDQ 323 Query: 297 LGSL 300 L Sbjct: 324 FAKL 327 >gi|186470718|ref|YP_001862036.1| succinyl-CoA synthetase, alpha subunit [Burkholderia phymatum STM815] gi|184197027|gb|ACC74990.1| succinyl-CoA synthetase, alpha subunit [Burkholderia phymatum STM815] Length = 301 Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 141/303 (46%), Positives = 203/303 (66%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T+V+VQG TG +FH ++ I Y T VVGG+ P KG + ++ PVF Sbjct: 1 MSILIDETTRVIVQGFTGDKASFHAKEMIAY-GTNVVGGVTPGKGGKH----HLERPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 TV +A T A AS+++VPP DAI+E+ +A + L+ IT+GIP DM+RVK L Sbjct: 56 TVKDAARETGATASLVFVPPPYCADAIMEAADAGLKLVCVITDGIPAQDMMRVKRYLLRY 115 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 +++ + ++GPNC GI++ +GIMPG I+R+G++GI+SRSGTL YEA Q + GLG Sbjct: 116 PKEARTMVVGPNCAGIISAGRAMLGIMPGHIYRRGNIGIVSRSGTLGYEAAAQLNALGLG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 +T+VGIGGDP+ G+ F+D L+LF D TE++VM+GEIGG E EAA+++ + Sbjct: 176 VTTSVGIGGDPINGSSFLDHLKLFEQDPDTEAVVMIGEIGGPQEAEAARWVSEH----MT 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VG+VAG TAP GR MGHAGA+IS A +K M+ G+ +APS + +G ++ + Sbjct: 232 KPVVGYVAGLTAPKGRRMGHAGAIISAAGDSAAEKAQIMQSYGLSVAPSASELGATVASV 291 Query: 297 LGS 299 L S Sbjct: 292 LES 294 >gi|260459593|ref|ZP_05807847.1| succinyl-CoA synthetase, alpha subunit [Mesorhizobium opportunistum WSM2075] gi|259034395|gb|EEW35652.1| succinyl-CoA synthetase, alpha subunit [Mesorhizobium opportunistum WSM2075] Length = 299 Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 140/304 (46%), Positives = 202/304 (66%), Gaps = 13/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++++T+V+VQG TGK G+FH E Y T++VGG+ P KG G +PVF Sbjct: 1 MAILLNRSTRVIVQGFTGKIGSFHAEDMKRYG-TKLVGGVTPGKGGQKHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV A T A AS+++VPP A D+I+E+ +A I L VCIT+GIP DM++VK + + Sbjct: 56 TVKGAVRETRAEASIVFVPPPFAADSIMEAADAGIKLCVCITDGIPSQDMMQVKRYMRRY 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 RL+GPNC G++TP +GIMPG+I+ G +GI+ RSGTL YEA Q G+G Sbjct: 116 RFEDRMRLVGPNCAGVITPGQALMGIMPGNIYLPGRIGIVGRSGTLGYEAASQMKALGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+L+LF D+ T+++VM+GEIGG E EAA + +D + Sbjct: 176 VSTSVGIGGDPINGSSFKDILKLFEQDDETDAVVMIGEIGGPQEAEAAIWARDNM----R 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ ++AG +AP GR MGHAGA+IS A++K+ +KEAG+ I P+P+ G + + Sbjct: 232 KPLIAYIAGLSAPKGRRMGHAGAIISAFGESAQEKVEILKEAGVIIVPTPSSFGEVVADT 291 Query: 297 LGSL 300 L + Sbjct: 292 LARM 295 >gi|226365052|ref|YP_002782835.1| succinyl-CoA synthetase subunit alpha [Rhodococcus opacus B4] gi|226243542|dbj|BAH53890.1| succinyl-CoA synthetase alpha chain [Rhodococcus opacus B4] Length = 300 Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 151/303 (49%), Positives = 206/303 (67%), Gaps = 10/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVF 59 M+I + K++KV+VQG+TG GT HT +L TQVVGG++ +K G+T G V +PVF Sbjct: 1 MAIFLTKDSKVIVQGITGGEGTKHT-ALMLKAGTQVVGGVNARKAGTTVTHDGGVELPVF 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--L 117 TVAEA E+T A+ S+ +VPP+ A DAI+E+I+AEIPL+V ITEGIPV D A Sbjct: 60 GTVAEAIEKTGADVSIAFVPPAFAKDAIVEAIDAEIPLLVVITEGIPVQDSAYAWAYNVS 119 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + + +R+IGPNCPGI+TP +GI P +I G +G++S+SGTLTY+ +F+ G Sbjct: 120 KGNKTRIIGPNCPGIITPGESLVGITPANIAGSGPIGLVSKSGTLTYQMMFELRD--FGF 177 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K K Sbjct: 178 STAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKANV----TK 233 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+VG+VAG TAP G+TMGHAGA++SG G A+ K +A++ AG+ + +P+ E+L Sbjct: 234 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKDALEAAGVKVGKTPSETAALAREIL 293 Query: 298 GSL 300 SL Sbjct: 294 QSL 296 >gi|111022540|ref|YP_705512.1| succinyl-CoA synthetase subunit alpha [Rhodococcus jostii RHA1] gi|110822070|gb|ABG97354.1| succinate--CoA ligase alpha subunit [Rhodococcus jostii RHA1] Length = 300 Score = 271 bits (693), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 151/303 (49%), Positives = 206/303 (67%), Gaps = 10/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVF 59 M+I + K++KV+VQG+TG GT HT +L TQVVGG++ +K G+T G V +PVF Sbjct: 1 MAIFLTKDSKVIVQGITGGEGTKHT-ALMLKAGTQVVGGVNARKAGTTVTHDGGVELPVF 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--L 117 TVAEA E+T A+ S+ +VPP+ A DAI+E+I+AEIPL+V ITEGIPV D A Sbjct: 60 GTVAEAIEKTGADVSIAFVPPAFAKDAIVEAIDAEIPLLVVITEGIPVQDSAYAWAYNVS 119 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + + +R+IGPNCPGI+TP +GI P +I G +G++S+SGTLTY+ +F+ G Sbjct: 120 KGNKTRIIGPNCPGIITPGESLVGITPANIAGTGPIGLVSKSGTLTYQMMFELRD--FGF 177 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K K Sbjct: 178 STAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKANV----TK 233 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+VG+VAG TAP G+TMGHAGA++SG G A+ K +A++ AG+ + +P+ E+L Sbjct: 234 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKDALEAAGVKVGKTPSETAALAREIL 293 Query: 298 GSL 300 SL Sbjct: 294 QSL 296 >gi|145222456|ref|YP_001133134.1| succinyl-CoA synthetase subunit alpha [Mycobacterium gilvum PYR-GCK] gi|315442902|ref|YP_004075781.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Mycobacterium sp. Spyr1] gi|145214942|gb|ABP44346.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Mycobacterium gilvum PYR-GCK] gi|315261205|gb|ADT97946.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Mycobacterium sp. Spyr1] Length = 300 Score = 271 bits (693), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 152/307 (49%), Positives = 209/307 (68%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++ ++KV+VQG+TG GT HT + +L TQ+VGG++ +K T T G +VN Sbjct: 1 MSIFLNADSKVIVQGITGGEGTKHT-KLMLKAGTQIVGGVNARKAGTEVTHQDKDGKDVN 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA + T A+ S+ +VPP+ + DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMKETGADVSIAFVPPAFSKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +EK +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 YNVEKGEKTRIIGPNCPGIITPGESLVGITPNNITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE+AA ++K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKLIVMIGEIGGDAEEKAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++S G G A K A++ AG+ + +P+ Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSDGAGTAAGKQEALEAAGVKVGKTPSETAAKA 293 Query: 294 VELLGSL 300 ELL +L Sbjct: 294 RELLQNL 300 >gi|256824635|ref|YP_003148595.1| succinyl-CoA synthetase subunit alpha [Kytococcus sedentarius DSM 20547] gi|256688028|gb|ACV05830.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Kytococcus sedentarius DSM 20547] Length = 297 Score = 271 bits (693), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 144/302 (47%), Positives = 204/302 (67%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVF 59 M+I ++ ++KV+VQG+TG G HT Q +L T VVGG++PKK G+ G +VPVF Sbjct: 1 MAIFLNNDSKVIVQGMTGSEGMKHT-QRMLTSGTNVVGGVNPKKAGTEVEFEGGTSVPVF 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA E T AN SV++VPP + DA++E++EAEI L V ITEGIPV D A +K Sbjct: 60 GSVKEAMEATGANVSVLFVPPKFSKDAVLEAVEAEIELAVVITEGIPVQDSAEFWAEAKK 119 Query: 120 S-SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI++P GI+P +I G +G++S+SGTLTY+ +++ G S Sbjct: 120 AGKTRIIGPNCPGIISPGQSNAGIIPANIAEGGRIGLVSKSGTLTYQMMYELRD--FGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID LE F D+ T++IVM+GEIGG AEE AA ++K+ KP Sbjct: 178 TAIGIGGDPIVGTTHIDALEAFQNDDETDAIVMIGEIGGDAEERAADYIKEHV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G AE K A++ G+ + +P++ + E++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAEAKKEALEAVGVKVGKTPSQTADLMREIMK 293 Query: 299 SL 300 L Sbjct: 294 GL 295 >gi|312080934|ref|XP_003142812.1| succinate-CoA ligase [Loa loa] gi|307762022|gb|EFO21256.1| succinate-CoA ligase [Loa loa] Length = 238 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 140/234 (59%), Positives = 180/234 (76%), Gaps = 1/234 (0%) Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS-SR 123 A+E T A+ASVIYVP A AI E+I+AEIPL+VC+TEG+P DMV+V+ RL K + +R Sbjct: 1 AREATGADASVIYVPARFAAKAIEEAIDAEIPLVVCVTEGVPQQDMVKVRNRLMKQNKTR 60 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPNCPGI+ P+ CKIGIMPG I RKG +G++SRSGTLTYEAV QT+ GLGQ+ VGI Sbjct: 61 LLGPNCPGIICPEECKIGIMPGHIHRKGVIGVVSRSGTLTYEAVHQTTLFGLGQTLCVGI 120 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDP GT FID L++FL D T+ I+++GEIGG EE+AA+FLK+ KP+V F+ Sbjct: 121 GGDPFNGTNFIDCLDIFLRDPQTKGIILIGEIGGQDEEKAAEFLKENNSGPNAKPVVSFI 180 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 AG+TAPPGR MGHAGA+I+GGKG A DKI A+K G+ ++ SPA++G + E L Sbjct: 181 AGQTAPPGRRMGHAGAIIAGGKGTAADKIEALKSVGVLVSASPAQMGAMMAEAL 234 >gi|124027099|ref|YP_001012419.1| succinyl-CoA synthetase alpha chain [Hyperthermus butylicus DSM 5456] gi|123977793|gb|ABM80074.1| Succinyl-CoA synthetase alpha chain [Hyperthermus butylicus DSM 5456] Length = 293 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 146/298 (48%), Positives = 203/298 (68%), Gaps = 18/298 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL D+NT+V+VQG+TG+ G+FHT+ + Y T++V G+ P KG G VPV+ Sbjct: 1 MAILADENTRVIVQGITGREGSFHTKLMLEYG-TKIVAGVTPGKGGMEVHG----VPVYD 55 Query: 61 TVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EA +E ANAS+++VP A DA+ E+I+A + L+V ITE IPV + +R + Sbjct: 56 TVEEALEEHPDANASIVFVPARFAPDAVYEAIDAGLKLVVVITEHIPVHETMRFVNYARQ 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +IGPNCPGI++P KIGIMPG +F G VGI+SRSGTLTYE + ++ G+GQST Sbjct: 116 RGTVIIGPNCPGIISPGKTKIGIMPGRVFTPGPVGIVSRSGTLTYEIAYALTRSGIGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKP 238 VGIGGDP+ G F + +ELF D T+ +V++GEIGG EE AA+ +++ GR KP Sbjct: 176 VVGIGGDPIVGLSFTEAMELFERDPETKVLVLIGEIGGDMEERAARMIEE----GRFTKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +V F+AG+TAPPG+ MGHAGA+I G G EDK+ A+++AG AR+ RSL E+ Sbjct: 232 VVAFIAGRTAPPGKRMGHAGAIIMMGTGRYEDKVRALEKAG-------ARVARSLSEI 282 >gi|304314712|ref|YP_003849859.1| succinyl-CoA synthase, subunit alpha [Methanothermobacter marburgensis str. Marburg] gi|302588171|gb|ADL58546.1| succinyl-CoA synthase, subunit alpha [Methanothermobacter marburgensis str. Marburg] Length = 289 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 144/298 (48%), Positives = 198/298 (66%), Gaps = 10/298 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D++T+ LVQG+TGK G+FHTEQ + Y T++V G+ P KG + G + V+ +V Sbjct: 2 ILLDEDTRCLVQGITGKQGSFHTEQMLEYG-TRIVAGVTPGKGGQEFLG----LGVYNSV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E +E NAS+I+VP A DA ESI + L+V ITE IPV D +++ E+ Sbjct: 57 EEVREEMDVNASIIFVPAPFAKDAAFESIR-HLDLVVIITEHIPVHDSMQIMEYAERMGK 115 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PGI+TP K+GIMP +IF +G++GI+SRSGTLTYE Q ++ G GQST VG Sbjct: 116 TVIGPNTPGIITPGVGKLGIMPTNIFTEGNIGIVSRSGTLTYEFAAQLTEAGFGQSTCVG 175 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV G F+DVLE F D T+++V++GEIGG AEE AA+++ D KP+ F Sbjct: 176 IGGDPVTGLGFVDVLERFEEDPQTDAVVLIGEIGGDAEERAAEYIGDHM----SKPVFAF 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 ++G TAPPG+ MGHAGA+I GG G A+ K A++ AG + P+ I R L + G+L Sbjct: 232 ISGSTAPPGKRMGHAGAIIEGGAGTAQSKREALEAAGAVVVDRPSAIVRELRRMEGAL 289 >gi|118474078|ref|YP_892080.1| succinyl-CoA synthetase, alpha subunit [Campylobacter fetus subsp. fetus 82-40] gi|118413304|gb|ABK81724.1| succinyl-CoA synthetase, alpha subunit [Campylobacter fetus subsp. fetus 82-40] Length = 290 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 149/300 (49%), Positives = 193/300 (64%), Gaps = 12/300 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNTKV+VQG TGK TFH EQ + Y T +VGG+ P KG G PVF Sbjct: 1 MSILVDKNTKVIVQGFTGKEATFHAEQCLAY-GTNIVGGVTPFKGGMIHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A S+I+VP +IIE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVVEAVKSTNATVSLIFVPAKFVAASIIEAADAGIELAVVITEHTPVRDMLEAKNYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKG--SVGILSRSGTLTYEAVFQTSQEGLGQS 178 +LIGPNCPGI++ D K+GIMP +F++ ++G++S+SGTLTYE Q EG G S Sbjct: 116 GMKLIGPNCPGIISADQAKLGIMPAMVFKRAGVNIGLISKSGTLTYEGANQILSEGYGIS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGD V G + ++L +F D T++IVM+GEIGGS E EA +K+ KKP Sbjct: 176 TAVGIGGDSVIGLTYSELLPMFENDPDTKAIVMIGEIGGSLEIEACNIIKN-----MKKP 230 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V F+AG++AP G+ MGHAGA+ISG A K+ A+ AG + SPA IG+ + EL+G Sbjct: 231 VVAFIAGQSAPKGKRMGHAGAIISGEDSTAAGKMKALSAAGAHVVASPAHIGKKIKELIG 290 >gi|293977872|ref|YP_003543302.1| succinyl-CoA synthetase subunit alpha [Candidatus Sulcia muelleri DMIN] gi|292667803|gb|ADE35438.1| succinyl-CoA synthetase, alpha subunit [Candidatus Sulcia muelleri DMIN] Length = 294 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 152/298 (51%), Positives = 206/298 (69%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K +K++VQG TGK G+FH+++ I Y T ++GG+ P KG G P+F Sbjct: 1 MSILVNKFSKIIVQGFTGKEGSFHSQKMISY-GTPIMGGVTPGKGGKIHLGK----PIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++ AN S+++VPP A DAIIESI + I +I+CITEGIP+ DM+++K + K Sbjct: 56 TVEEAVKKLNANISILFVPPMFAYDAIIESIYSGIKIIICITEGIPISDMLKIKNIINKK 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + LIGPNCPGI+TP+ K+GIMPG IF+KG VGI+S+SGTLTYEA Q + G G ST Sbjct: 116 KNCILIGPNCPGIITPNEAKVGIMPGFIFKKGRVGIVSKSGTLTYEAANQVVKSGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDP+ GT ++ F D T+ IVM+GEIGG E AA+ + +KKP+ Sbjct: 176 AVGIGGDPIIGTSMKSIISEFFNDSETDIIVMIGEIGGKLEINAAK---WIKNQKKKKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +GF+AG+TAP GRTMGHAGA++ A KIN +K+ GI I SP++IG + ++L Sbjct: 233 LGFIAGQTAPKGRTMGHAGAIVGEKNDTAIYKINMLKKCGIKIIKSPSQIGDEVFKIL 290 >gi|269955536|ref|YP_003325325.1| succinyl-CoA synthetase subunit alpha [Xylanimonas cellulosilytica DSM 15894] gi|269304217|gb|ACZ29767.1| succinyl-CoA synthetase, alpha subunit [Xylanimonas cellulosilytica DSM 15894] Length = 298 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 147/305 (48%), Positives = 203/305 (66%), Gaps = 12/305 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++K++VQG+TG G HT +L Q+VGG++ +K T T G +V Sbjct: 1 MSIYLNKDSKIIVQGITGGMGAKHT-ALMLDSGAQIVGGVNARKAGTTVTHKNHEGDDVT 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV EA T AN SV++VPP+ DA IE+++A +PLIV ITEG+PV D V A Sbjct: 60 LPVFGTVKEAMAETGANVSVLFVPPAFTKDAAIEAVDAGMPLIVVITEGVPVQDTAEVWA 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 L+ +R+IGPNCPGI+TP GI P +I KG VG++S+SGTLTY+ +++ L Sbjct: 120 YLQGKQTRMIGPNCPGIITPGESLAGITPHTITGKGPVGLVSKSGTLTYQMMYELRD--L 177 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G STA+GIGGDPV GT ID LE F D T++IVM+GEIGG AEE AA ++K+ Sbjct: 178 GFSTAIGIGGDPVVGTTHIDALEAFENDPETQAIVMIGEIGGDAEERAAAYIKEHV---- 233 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ G+ + +P+ L E Sbjct: 234 TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAVGVRVGKTPSETASLLRE 293 Query: 296 LLGSL 300 +L ++ Sbjct: 294 VLAAV 298 >gi|299133559|ref|ZP_07026753.1| succinyl-CoA synthetase, alpha subunit [Afipia sp. 1NLS2] gi|298591395|gb|EFI51596.1| succinyl-CoA synthetase, alpha subunit [Afipia sp. 1NLS2] Length = 293 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 156/299 (52%), Positives = 207/299 (69%), Gaps = 12/299 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVDK+TKVL QG+TG AGT HT + + Y T VV G+ P KG ++N+PV+ Sbjct: 1 MAILVDKDTKVLCQGMTGWAGTHHTARMMEYGTT-VVAGVTPGKGGR----SHLNLPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+AK T ANAS+I+VPP+ A A+IE+IEAEIPLIV +TE +P LDMVRV+ L S Sbjct: 56 TVAKAKAETEANASMIFVPPANAAAAMIEAIEAEIPLIVAVTERVPALDMVRVRQALNGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPN GIL P+ C IG+M R G+VGI+SRS +LT E V Q S EGLGQST Sbjct: 116 KTRLIGPNSQGILAPEICMIGVMATGSERPGNVGIVSRSASLTSEVVAQISSEGLGQSTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK--KP 238 VG+GGDP+ G + +ELFL D T+ IV++GEIGG+ E+E A++L+ GRK KP Sbjct: 176 VGVGGDPIHGMSMLQCVELFLEDPETKGIVLIGEIGGTEEQEVAEYLQ-----GRKVAKP 230 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +V +AG+ APP R MGH+G + G+G A KI A++ AG+ +APS +G ++ + L Sbjct: 231 VVALIAGQYAPPERRMGHSGTLTMYGRGDANSKIAALERAGVQVAPSSHLVGATIRQAL 289 >gi|282879725|ref|ZP_06288455.1| succinate-CoA ligase, alpha subunit [Prevotella timonensis CRIS 5C-B1] gi|281306394|gb|EFA98424.1| succinate-CoA ligase, alpha subunit [Prevotella timonensis CRIS 5C-B1] Length = 288 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 140/297 (47%), Positives = 195/297 (65%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ +TK++VQG+TG+ G+FH + Y T VVGG P K G + VF Sbjct: 1 MSILINHDTKLIVQGITGRDGSFHATKMKEY-GTNVVGGTSPGKAGQEVAG----ISVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T AN SVI+VP + A DA++E+ +A I LI+CITEG+P LD+V + Sbjct: 56 TVKDAVKATGANTSVIFVPAAFAKDAMLEAADAGIQLIICITEGVPTLDVVEAYRYISDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++LIGPNCPG+++P+ +GIMP +IF+KG G++SRSGTLTY+ V + G GQSTA Sbjct: 116 GAKLIGPNCPGLISPEESMVGIMPTNIFKKGHTGVISRSGTLTYQVVADLTAAGFGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ G F D+LE+F D T+ I ++GEIGG AEE AA ++K KP+V Sbjct: 176 VGVGGDPIVGLYFQDLLEMFQNDPETDCIALIGEIGGDAEERAADYIKQHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F++G+ AP G+ MGHAGA+IS G G A +KI A + AG+ +A I L E + Sbjct: 232 AFISGREAPKGKQMGHAGAIISSGSGTAAEKIAAFEAAGVPVARETCEIPALLKERM 288 >gi|85706353|ref|ZP_01037447.1| succinyl-CoA synthetase alpha subunit [Roseovarius sp. 217] gi|85669126|gb|EAQ23993.1| succinyl-CoA synthetase alpha subunit [Roseovarius sp. 217] Length = 294 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 140/294 (47%), Positives = 194/294 (65%), Gaps = 13/294 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I++DKN++VLV GLTG+ G+FHT+ I + T VVGG+ P KG T G +PVF Sbjct: 2 MAIIIDKNSRVLVTGLTGRIGSFHTQDMINH-GTNVVGGVTPGKGGTKHNG----LPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A T A+ + +VPP A D+I+E+ +A I VCI +GIP DM++VK + + Sbjct: 57 TVKGAVAETGADLVICFVPPPFAADSIMEAADAGITTCVCIADGIPASDMIKVKRYMRRY 116 Query: 121 SS----RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + RLIGPNC GI+TP G+MP I++ G VGI+ RSGTL YEA Q + G+G Sbjct: 117 KAEKRMRLIGPNCAGIITPGQAFAGLMPPHIYKPGRVGIIGRSGTLGYEAASQMKERGIG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+LELF DE T+++VMVGEIGG E EAA +++D Sbjct: 177 VSTSVGIGGDPINGSSFRDILELFENDEGTDAVVMVGEIGGPQEAEAAAYIRDHM----T 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 KP+ ++AG +AP GR MGHAGA++S A++K+ + EAG+ I P+P+ G Sbjct: 233 KPVAAYIAGLSAPKGRRMGHAGAIVSAFGESAQEKVEILSEAGVTIVPTPSSFG 286 >gi|302342617|ref|YP_003807146.1| succinyl-CoA synthetase, subunit alpha [Desulfarculus baarsii DSM 2075] gi|301639230|gb|ADK84552.1| succinyl-CoA synthetase, alpha subunit [Desulfarculus baarsii DSM 2075] Length = 289 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 158/298 (53%), Positives = 208/298 (69%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KN++V+VQG+TG+ G FHTE+ I Y T VV G+ P KG + G PVF Sbjct: 1 MSILVNKNSRVVVQGVTGREGMFHTEKMIEY-GTNVVAGVTPGKGGSTVLGA----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A +T A+ SV++VP + A DA E+ +A I L+V ITE IP DM+ KA L Sbjct: 56 TVAQAVAQTGADVSVVFVPAAFAADAACEAADAGIKLVVVITEHIPAKDMIMAKAYLRAR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++GPNCPG++TP CK+GIMPG I + G VG++SRSGTLTYE V Q +Q GLGQST Sbjct: 116 GVLMVGPNCPGVITPGECKLGIMPGYIHKPGKVGLISRSGTLTYEVVHQLTQAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G F+++L+LF AD+ TE++ +GEIGG AEE AA + K G KP+ Sbjct: 176 IGIGGDPIIGLGFVELLKLFAADDQTEAVCTIGEIGGDAEERAAALV----KAGYPKPVF 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GFVAG TAPPG+ MGHAGA+ISGGKG A DK+ AM++AGI + G ++ ++LG Sbjct: 232 GFVAGLTAPPGKRMGHAGAIISGGKGKAADKLAAMEDAGITVVRRLGDFGATVAKVLG 289 >gi|284165338|ref|YP_003403617.1| succinyl-CoA synthetase, subunit alpha [Haloterrigena turkmenica DSM 5511] gi|284014993|gb|ADB60944.1| succinyl-CoA synthetase, alpha subunit [Haloterrigena turkmenica DSM 5511] Length = 290 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 157/298 (52%), Positives = 210/298 (70%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVD +T+V+VQG+TG G FH +Q + Y T VV G P KG G VPV+ Sbjct: 1 MSVLVDDDTRVVVQGITGGEGKFHAKQMMEYG-TNVVAGAVPGKGGQEVEG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E A+ SVI+VPP+ AGDA+ ES++A++ L V ITEGIP DM RV RL ++ Sbjct: 56 TVHEAVEEENADTSVIFVPPAFAGDAVFESLDADLDLAVAITEGIPTQDMARVNKRLTET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP K+GI+PG+IF +G+VG++SRSGTLTY+ V + G+GQ+TA Sbjct: 116 DTRLIGPNCPGLITPGEAKLGILPGNIFAEGNVGLVSRSGTLTYQVVDSLTNRGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT+F+D LELF D T++IVM GEIGG EEEAA F+ D P+ Sbjct: 176 IGIGGDPIIGTDFVDALELFEDDPDTDAIVMCGEIGGEDEEEAAAFIDDYV----DTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G AE KI+A+ +AG+ + +P + + E L Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAESKISALNDAGVPVGDTPEEVADHIEEFL 289 >gi|161833762|ref|YP_001597958.1| succinyl-CoA synthetase subunit alpha [Candidatus Sulcia muelleri GWSS] gi|152206252|gb|ABS30562.1| succinyl-CoA synthetase, alpha subunit [Candidatus Sulcia muelleri GWSS] Length = 291 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 152/298 (51%), Positives = 205/298 (68%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K +K++VQG TGK G+FH+ + I Y T ++GG+ P KG G P+F Sbjct: 1 MSILVNKFSKIIVQGFTGKEGSFHSHKMISY-GTPIMGGVTPGKGGKIHLGK----PIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++ AN S+++VPP A DAIIESI + I +I+CITEGIP+ DM+++K + K Sbjct: 56 TVEEAVKKLNANISILFVPPMFAYDAIIESIYSGIKIIICITEGIPISDMLKIKNIINKK 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + LIGPNCPGI+TP+ K+GIMPG IF+KG VGI+S+SGTLTYEA Q + G G ST Sbjct: 116 KNCILIGPNCPGIITPNEAKVGIMPGFIFKKGRVGIVSKSGTLTYEAANQVVKSGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDP+ GT ++ F D T+ IVM+GEIGG E AA+ + +KKP+ Sbjct: 176 AVGIGGDPIIGTSMKSIISEFFNDSETDIIVMIGEIGGKLEINAAK---WIKNQKKKKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +GF+AG+TAP GRTMGHAGA++ A KIN +K+ GI I SP++IG + ++L Sbjct: 233 LGFIAGQTAPKGRTMGHAGAIVGEKNDTAIYKINMLKKCGIKIIKSPSQIGDEVFKIL 290 >gi|229821497|ref|YP_002883023.1| succinyl-CoA synthetase, alpha subunit [Beutenbergia cavernae DSM 12333] gi|229567410|gb|ACQ81261.1| succinyl-CoA synthetase, alpha subunit [Beutenbergia cavernae DSM 12333] Length = 296 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 146/302 (48%), Positives = 199/302 (65%), Gaps = 12/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 M+I +D ++ V+VQG+TG GT HT + +L T +VGG++P+K T GG V+ Sbjct: 1 MAIFIDASSTVIVQGMTGSEGTKHTTR-MLASGTNIVGGVNPRKAGQSQTFPAPDGGEVD 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TVA+A T AN SVI+VPP+ A++E+IEA +PL+V ITEG+PV D Sbjct: 60 VPVFGTVADAVAATGANVSVIFVPPAFTKAAVVEAIEAGVPLVVIITEGVPVADTAEFFT 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 + RLIGPNCPG+++P +GI+P +I G VG++S+SGTLTY+ +++ Sbjct: 120 LAHERGVRLIGPNCPGVISPGLSNVGIIPANITGPGKVGLVSKSGTLTYQMMYELRD--F 177 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G STAVGIGGDPV GT ID L F AD TE+IVM+GEIGG AEE AA+F+K Sbjct: 178 GFSTAVGIGGDPVIGTTHIDALAAFEADPETEAIVMIGEIGGDAEERAAEFIKANV---- 233 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + Sbjct: 234 TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSETAELVRA 293 Query: 296 LL 297 LL Sbjct: 294 LL 295 >gi|50290257|ref|XP_447560.1| hypothetical protein [Candida glabrata CBS 138] gi|49526870|emb|CAG60497.1| unnamed protein product [Candida glabrata] Length = 319 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 149/304 (49%), Positives = 200/304 (65%), Gaps = 10/304 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ K+TKV+ QG TGK GTFH + + Y T VVGG +PKK G PVF + Sbjct: 21 NLLLPKDTKVMFQGFTGKQGTFHAKISQEYG-TNVVGGTNPKKAGQTHLGQ----PVFAS 75 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V + + T A S I+VPP AG AI E+IEAEIPL VCITEGIP D++ + L+ ++ Sbjct: 76 VKDCVKETGATVSGIFVPPPIAGAAIQEAIEAEIPLAVCITEGIPQHDLLYISEMLKSQN 135 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPG++ P + ++GI P IF+ G +GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 136 KTRLVGPNCPGVINPANHVRVGIQPTRIFKPGKIGIVSRSGTLTYEAVQQTTLSGLGQSL 195 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKP 238 VGIGGD GT+FIDVL+LFL D TE I+M+GEIGG E EAA+FL++ + KP Sbjct: 196 VVGIGGDAFPGTDFIDVLKLFLEDPQTEGIIMLGEIGGKPEIEAAEFLQEYNFSKANPKP 255 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AGK A G MGH+GA++ G AE K A++ G+ + SP +G++L+E Sbjct: 256 VASFIAGKVAGQMKGVRMGHSGAIVEGSGTDAESKKEALRNVGVQVVESPGYLGQTLLEQ 315 Query: 297 LGSL 300 L Sbjct: 316 FSKL 319 >gi|15806267|ref|NP_294972.1| succinyl-CoA synthetase subunit alpha [Deinococcus radiodurans R1] gi|6458991|gb|AAF10818.1|AE001972_8 succinyl-CoA synthetase, alpha subunit [Deinococcus radiodurans R1] Length = 301 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 144/294 (48%), Positives = 199/294 (67%), Gaps = 20/294 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M ILVDKN+KV+VQG+TG G H+ +A+ TQVV G+ P KG + G P++ Sbjct: 1 MGILVDKNSKVIVQGMTGSEGAKHS-RAMKEFGTQVVAGVTPGKGGQDFEG----WPIYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEAKE+ AN S+I+VPP+GA DA++E+ A IPLIV ITEG+P +DM+R +++ Sbjct: 56 SVAEAKEKHGANVSIIFVPPAGAADAVLEAAHAGIPLIVLITEGVPTVDMMRAVQEVKEL 115 Query: 121 SS----------RLIGPNCPGILTPDSCKIGIMPGSIFRK-GSVGILSRSGTLTYEAVFQ 169 + RLIG NCPG++T K+GIMP I+ G +G++SRSGTLTYEA Sbjct: 116 DAHSKANGGQGVRLIGGNCPGLVTNGEAKVGIMPNRIYTNPGRIGLISRSGTLTYEAAKL 175 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + G+G ST VGIGGDPV GT F DVL +F ADE T+++V++GEIGG+ EE AA+++K+ Sbjct: 176 LNDAGMGTSTTVGIGGDPVIGTTFADVLPMFEADEGTDAVVVIGEIGGADEEAAAEYIKN 235 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 KKP+V F++G++AP G+ MGHAGA+I G G E K+ A K A + +A Sbjct: 236 N----MKKPVVAFISGRSAPAGKRMGHAGAIIMGDVGTPESKLAAFKAANVPVA 285 >gi|255717731|ref|XP_002555146.1| KLTH0G02464p [Lachancea thermotolerans] gi|238936530|emb|CAR24709.1| KLTH0G02464p [Lachancea thermotolerans] Length = 326 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 149/304 (49%), Positives = 202/304 (66%), Gaps = 10/304 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + K+TKV++QG TGK TFH + + Y T +VGG +PKK G PVF T Sbjct: 28 NLRLTKDTKVIIQGFTGKQATFHAKLSQEYG-TNIVGGTNPKKAGQTHLGQ----PVFAT 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA ++T A A+ I+VPP A AI E+IEAEIPL V ITEGIP DM+ V L+ + Sbjct: 83 VAEAMKQTGATATGIFVPPPIAAKAIREAIEAEIPLAVSITEGIPQHDMLYVAEMLKSQQ 142 Query: 121 SSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI++P++ +IGI P IF+ G +GI+S+SGTLTYEAV QT+ GLGQ+ Sbjct: 143 KTRLVGPNCPGIISPEARVRIGIQPSRIFKPGKIGIVSKSGTLTYEAVQQTTITGLGQTL 202 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKP 238 +G+GGD GT+FID L+ F+ D ATE IVM+GEIGG AE EAAQFLK+ R P Sbjct: 203 VIGMGGDAFPGTDFIDTLKYFMEDPATEGIVMLGEIGGKAEIEAAQFLKEFNLTRSNPMP 262 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG A G MGH+GA++ G AE K A+++AG+ + SP +G++L++ Sbjct: 263 VASFIAGAVAGQMKGVRMGHSGAIVEGSGTDAESKKAALRDAGVAVVESPGHLGKALLDE 322 Query: 297 LGSL 300 L Sbjct: 323 FAKL 326 >gi|126663987|ref|ZP_01734981.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [Flavobacteria bacterium BAL38] gi|126623936|gb|EAZ94630.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [Flavobacteria bacterium BAL38] Length = 290 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 156/298 (52%), Positives = 216/298 (72%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K++VQG TG GTFH Q I Y T VVGG+ P KG + +++ PVF Sbjct: 1 MSVLVNKNSKIIVQGFTGSEGTFHASQMIEY-GTNVVGGVTPGKGGST----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E+ A+ S+I+VPP+ A DAI+E+ EA I +I+CITEGIPV DM++ ++ Sbjct: 56 TVKDAVEKAGADTSIIFVPPAFAADAIMEAAEAGIKVIICITEGIPVADMIKAYDYIKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP+ K+GIMPG +F+KG+VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLVGPNCPGVITPEEAKVGIMPGFVFKKGTVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE I+M+GEIGG E +AA+++K + G +KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETEIIIMIGEIGGQLEADAAKWIKAD---GNRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G AE K M+E GI + SPA IG+ + E+LG Sbjct: 233 GFIAGETAPKGRTMGHAGAIVGGADDTAEAKKRIMRENGIHVVDSPAEIGKKVKEVLG 290 >gi|188581005|ref|YP_001924450.1| succinyl-CoA synthetase subunit alpha [Methylobacterium populi BJ001] gi|179344503|gb|ACB79915.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium populi BJ001] Length = 296 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 143/301 (47%), Positives = 196/301 (65%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T +LVQG+TG GTFH ++ I Y + VVGG+ P KG G VPVF Sbjct: 1 MSILIDEKTPILVQGITGDKGTFHAKEMIAY-GSNVVGGVTPGKGGKTHCG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E T A S+ +V P A DAI+E+ +A + L+ IT+GIP DM+RVK L + Sbjct: 56 TVKEAVEATGATTSITFVAPPFAADAIMEAADAGLRLVCSITDGIPAQDMMRVKRYLRRY 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + ++GPNC GI++P +GIMPG I+ G VG++SRSGTL YEA Q + G+G Sbjct: 116 PKEKRTMVVGPNCAGIISPGKSMLGIMPGHIYLPGKVGVISRSGTLGYEAAAQMKELGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L LF D TE+++M+GEIGG E EA+ ++K+ Sbjct: 176 ISTSVGIGGDPINGSSFLDHLALFEQDPETEAVLMIGEIGGPQEAEASAWIKEN----FS 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++GFVAG TAP GR MGHAGA+IS A +K M+ G+ +AP P G+++ ++ Sbjct: 232 KPVIGFVAGLTAPKGRRMGHAGAIISATGDSAAEKAEIMRSYGLTVAPDPGSFGQTVADV 291 Query: 297 L 297 L Sbjct: 292 L 292 >gi|119719431|ref|YP_919926.1| succinyl-CoA synthetase, alpha subunit [Thermofilum pendens Hrk 5] gi|119524551|gb|ABL77923.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Thermofilum pendens Hrk 5] Length = 294 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 146/301 (48%), Positives = 200/301 (66%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVD+ T+VLVQG+TGK G HTEQ + Y T++V G+ P KG + G VPV+ Sbjct: 1 MAILVDEKTRVLVQGITGKQGMLHTEQMLRYG-TRIVAGVTPGKGGSTIVG----VPVYN 55 Query: 61 TVAEAKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-VKARLE 118 TVAEA ++ N S+++VP A DA+ E+++A I +V ITE IPV + + V+ L Sbjct: 56 TVAEAVDKHPEINTSIVFVPAPYAPDAVYEALDAGIKKVVVITEHIPVHETIEFVRYALS 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 K + +IGPN PG+++P K+GIMPG F+ G+VG++SRSGTLTYE + G G S Sbjct: 116 KQAV-IIGPNTPGVISPGKSKVGIMPGEYFKPGNVGVVSRSGTLTYEVSLRLLASGFGVS 174 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV G F DV ELF D+ T +V+VGEIGG+ EE A++ AK KKP Sbjct: 175 TAVGIGGDPVTGLSFEDVYELFARDDETRLVVLVGEIGGTKEERFAEYY---AKLSSKKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V F+AGK+APPGR MGHAGA++ G +G E K+NA++ +GI +A S I + +L Sbjct: 232 VVAFIAGKSAPPGRKMGHAGAIVFGSEGSYESKVNALRRSGIYVAQSLREIAEIVARVLS 291 Query: 299 S 299 + Sbjct: 292 T 292 >gi|269986563|gb|EEZ92846.1| succinyl-CoA synthetase, alpha subunit [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 288 Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 143/295 (48%), Positives = 198/295 (67%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DK+TKVLVQG+TG G FH+ +A++ T+VV G+ P KG G V VF Sbjct: 1 MAILIDKDTKVLVQGITGHQGKFHS-KAMIDLGTKVVAGVTPGKGGERVNG----VRVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 V A E+T ANASV++VP D++IE+I+A I LI ITE +P DM+++ + Sbjct: 56 DVKTAVEKTGANASVVFVPALMTRDSVIEAIDAGIKLITIITEHVPFQDMLKINEYAKLK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPG+ P K+GI+P +I +KG VG++SRSGTLTYE V ++ GLG+ST Sbjct: 116 DVKIIGPNCPGLAAPGIGKLGIIPNTILKKGVVGVISRSGTLTYEIVNVITETGLGESTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGD V G FID L+LF DE T+++V+VGEIGG EE+AA+F++ E KP+V Sbjct: 176 LGIGGDKVPGIGFIDALKLFKQDEQTKAVVIVGEIGGDEEEKAAEFIRKEF----DKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+ G APPG+ MGHAGA+ISG G AE K+ A K+A + +A + +I L+ Sbjct: 232 AFIDGIYAPPGKRMGHAGAIISGKTGTAESKLKAFKKANVPVAKNFKKIATYLIN 286 >gi|163851227|ref|YP_001639270.1| succinyl-CoA synthetase subunit alpha [Methylobacterium extorquens PA1] gi|218530095|ref|YP_002420911.1| succinyl-CoA synthetase subunit alpha [Methylobacterium chloromethanicum CM4] gi|240138380|ref|YP_002962852.1| Malate thiokinase, small subunit [Methylobacterium extorquens AM1] gi|254560926|ref|YP_003068021.1| malate thiokinase, small subunit [Methylobacterium extorquens DM4] gi|259016277|sp|P53595|MTKB_METEA RecName: Full=Malate--CoA ligase subunit alpha; AltName: Full=MTK-alpha; AltName: Full=Malate thiokinase; AltName: Full=Malyl-CoA synthetase gi|163662832|gb|ABY30199.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium extorquens PA1] gi|218522398|gb|ACK82983.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium chloromethanicum CM4] gi|240008349|gb|ACS39575.1| Malate thiokinase, small subunit [Methylobacterium extorquens AM1] gi|254268204|emb|CAX24130.1| Malate thiokinase, small subunit [Methylobacterium extorquens DM4] Length = 296 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 143/301 (47%), Positives = 195/301 (64%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T +LVQG+TG GTFH ++ I Y + VVGG+ P KG G VPVF Sbjct: 1 MSILIDEKTPILVQGITGDKGTFHAKEMIAY-GSNVVGGVTPGKGGKTHCG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E T A S+ +V P A DAI+E+ +A + L+ IT+GIP DM+RVK L + Sbjct: 56 TVKEAVEATGATTSITFVAPPFAADAIMEAADAGLKLVCSITDGIPAQDMMRVKRYLRRY 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + ++GPNC GI++P +GIMPG I+ G VG++SRSGTL YEA Q + G+G Sbjct: 116 PKEKRTMVVGPNCAGIISPGKSMLGIMPGHIYLPGKVGVISRSGTLGYEAAAQMKELGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L LF D TE+++M+GEIGG E EA+ ++K+ Sbjct: 176 ISTSVGIGGDPINGSSFLDHLALFEQDPETEAVLMIGEIGGPQEAEASAWIKEN----FS 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++GFVAG TAP GR MGHAGA+IS A +K M+ G+ +AP P G ++ ++ Sbjct: 232 KPVIGFVAGLTAPKGRRMGHAGAIISATGDSAAEKAEIMRSYGLTVAPDPGSFGSTVADV 291 Query: 297 L 297 L Sbjct: 292 L 292 >gi|325105144|ref|YP_004274798.1| succinyl-CoA synthetase, alpha subunit [Pedobacter saltans DSM 12145] gi|324973992|gb|ADY52976.1| succinyl-CoA synthetase, alpha subunit [Pedobacter saltans DSM 12145] Length = 344 Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 158/297 (53%), Positives = 212/297 (71%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG GT+H Q I Y TQVVGG+ P KG +++ PVF Sbjct: 55 MSVLVNKDSKVIVQGFTGNEGTYHATQMIEY-GTQVVGGVTPGKGGQ----KHLDRPVFN 109 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ++T A+ S+I+VPP+ A DAI+E+ EA I +IVCITEGIP DM++VK + Sbjct: 110 TVKDAVDQTGADVSIIFVPPAFAADAIMEAAEAGIKVIVCITEGIPTKDMIQVKEYISDK 169 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+T D KIGIMPG IF+KG++G++S+SGTLTYEAV Q + GLG +TA Sbjct: 170 DCRLIGPNCPGIITADEAKIGIMPGFIFKKGNIGVVSKSGTLTYEAVDQVVKAGLGITTA 229 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D T I+M+GEIGG E EAA+++K+ KP+V Sbjct: 230 IGIGGDPIIGTPTKEAVELLMNDPETHGIIMIGEIGGGMEAEAARWIKEHG----TKPVV 285 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++ G A K+ M+E GI + SPA IG ++ +LL Sbjct: 286 GFIAGQTAPPGRRMGHAGAIVGGADDTAAAKMKIMRECGITVVESPAEIGAAMAKLL 342 >gi|325001242|ref|ZP_08122354.1| succinyl-CoA synthetase subunit alpha [Pseudonocardia sp. P1] Length = 295 Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 145/299 (48%), Positives = 202/299 (67%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +++N+KV+VQG+TG GT H + ++ T +VGG++ +K T T G+ +V V+ Sbjct: 1 MSIFLNENSKVIVQGITGGEGTKHATK-MIASGTNIVGGVNARKAGTTHTVGDKDVTVYG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 TV EA + T A+ SV++VPP A DA+IE+I+AEIPL V ITEGIPV D A + Sbjct: 60 TVEEAMKETGADVSVLFVPPKFAKDAVIEAIDAEIPLAVVITEGIPVHDSAYFWAHAVAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI++P GI+P +I G +G++S+SGTLTY+ +F+ + G S Sbjct: 120 GNKTRIIGPNCPGIISPGKSNAGIIPANIAGPGKIGLVSKSGTLTYQMMFELRE--FGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDPV GT ID LE F AD TE+IVM+GEIGG AEE AA F+K KP Sbjct: 178 TAIGIGGDPVIGTTHIDALEAFEADPDTEAIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + G+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + E+L Sbjct: 234 VAGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAALMKEIL 292 >gi|254456457|ref|ZP_05069886.1| malate--CoA ligase subunit alpha [Candidatus Pelagibacter sp. HTCC7211] gi|207083459|gb|EDZ60885.1| malate--CoA ligase subunit alpha [Candidatus Pelagibacter sp. HTCC7211] Length = 295 Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 138/301 (45%), Positives = 202/301 (67%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++++ K+TK+L+QG TGK GTFH E+ I Y + V+GG+ P KG +++ PVF Sbjct: 1 MAVIIQKDTKILIQGFTGKMGTFHAEEMIKYG-SNVIGGVTPGKGGQK----HLDKPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A AS+++VPP+ A D+ +E+ +A I V I +GIP DM+R+K + + Sbjct: 56 TVKDAVQETGATASILFVPPAFAADSAMEAADAGIKTCVAIVDGIPSHDMIRIKRYMRRY 115 Query: 121 SSR----LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S + L+GPNC GI++P +GIMPG I+++G VGI+SRSGTL YEA Q +G Sbjct: 116 SRKEKMTLVGPNCAGIISPGKSMLGIMPGHIYKEGRVGIISRSGTLGYEAAQQLMDLNIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D++E F D+ T+ I+M+GEIGG E A +F AK K Sbjct: 176 ISTSVGIGGDPINGSSFRDIIEKFETDDETDLILMIGEIGGPQEVAAGEF----AKENMK 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KPIVG++AG TAP GR MGHAGA++S A +K+ +KE G+ I+ +P+ +G ++ E+ Sbjct: 232 KPIVGYIAGLTAPKGRVMGHAGAIVSAYGESAVEKVELLKECGVTISKNPSVMGETVKEV 291 Query: 297 L 297 L Sbjct: 292 L 292 >gi|225165682|ref|ZP_03727484.1| succinyl-CoA synthetase, alpha subunit [Opitutaceae bacterium TAV2] gi|224800071|gb|EEG18498.1| succinyl-CoA synthetase, alpha subunit [Opitutaceae bacterium TAV2] Length = 311 Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 151/306 (49%), Positives = 209/306 (68%), Gaps = 16/306 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+ TKVLVQG+TG G H + ++ Y T++V G+ P KG ++ N VP+F Sbjct: 1 MAILITPETKVLVQGITGDFGGRHAKLSLDY-GTKIVAGVTPGKGGQFFIHENHKVPIFN 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV +A + T A S ++VPP A DAI+E ++A + L+V ITEGIP+ DMVRVK +++ Sbjct: 60 TVKDAVKATGATVSAVFVPPPFAADAILEGVDAGLDLVVTITEGIPIKDMVRVKRAMQRT 119 Query: 120 ---SSSRLIGPNCPGILTP----DS---CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 S +RL+GPNCPG++ P DS C+IGI PG I +KG VG++SRSGTLTYEAV+Q Sbjct: 120 TQSSKTRLVGPNCPGLVCPGEGKDSKGGCRIGIAPGYINKKGHVGVVSRSGTLTYEAVYQ 179 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + +G+GQST VGIGGDPV GT +DV++LF D T I+++GEIGG+AE EAA+++K Sbjct: 180 LTTKGIGQSTTVGIGGDPVNGTSHLDVIKLFNEDPDTHGIILIGEIGGNAEVEAARWIKK 239 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KKP+ GF+AG TAP GR MGHAGA++ G + A KI KE GI +A +P+ + Sbjct: 240 HC----KKPVAGFIAGATAPAGRRMGHAGAIVGGAEDTAAAKIAVFKECGIEVAETPSDM 295 Query: 290 GRSLVE 295 +L+ Sbjct: 296 ADALLR 301 >gi|169628152|ref|YP_001701801.1| succinyl-CoA synthetase subunit alpha [Mycobacterium abscessus ATCC 19977] gi|169240119|emb|CAM61147.1| Succinyl-CoA synthetase, alpha chain [Mycobacterium abscessus] Length = 300 Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 151/307 (49%), Positives = 209/307 (68%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQVVGG++ +K T + G +V+ Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHT-ALMLKAGTQVVGGVNARKAGTTVSHVDKSGQSVD 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA + T A+ S+ +VPP+ + DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAIKETGADVSIAFVPPAFSKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +EK + +R+IGPNCPGI+TP +GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 YNVEKGNKTRIIGPNCPGIITPGEALVGITPNNITGTGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKIIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSETAKLA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILQSL 300 >gi|296447388|ref|ZP_06889314.1| succinyl-CoA synthetase, alpha subunit [Methylosinus trichosporium OB3b] gi|296255091|gb|EFH02192.1| succinyl-CoA synthetase, alpha subunit [Methylosinus trichosporium OB3b] Length = 295 Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 145/301 (48%), Positives = 197/301 (65%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T +LVQG+TG G+FH ++ I Y T VV G+ P KG G VP+F Sbjct: 1 MSILIDEKTPILVQGITGDKGSFHAKEMIDYG-TNVVAGVTPGKGGKTVHG----VPIFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 TV EA ++T A S+ +V P A DAI+E+ +A I LI IT+GIP DM+RVK Sbjct: 56 TVREAVKQTGATTSITFVAPPFAADAIMEAADAGIRLICSITDGIPAQDMMRVKRYFLRY 115 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + ++GPNC GI++P +GIMPG I+++G+VG++SRSGTL YEA Q + G+G Sbjct: 116 PRERRPTMVGPNCAGIISPGKAMLGIMPGHIYKQGNVGLISRSGTLGYEAASQLKELGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L LF D TE+++++GEIGG E EAA ++K+ Sbjct: 176 ISTSVGIGGDPINGSSFLDHLVLFDQDPETEAVLIIGEIGGPQEAEAAAWIKENF----S 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGFVAG TAP GR MGHAGA+IS A +K MK G+ +APSPA G ++ + Sbjct: 232 KPVVGFVAGLTAPKGRRMGHAGAIISATGDSAAEKTEIMKSYGLTVAPSPAEFGSAVASV 291 Query: 297 L 297 L Sbjct: 292 L 292 >gi|313901648|ref|ZP_07835083.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Thermaerobacter subterraneus DSM 13965] gi|313468090|gb|EFR63569.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Thermaerobacter subterraneus DSM 13965] Length = 288 Score = 268 bits (685), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 143/297 (48%), Positives = 197/297 (66%), Gaps = 10/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+D+ T+V+VQG+TG G+FHT Q I Y T+VV G+ P K G VPV+ Sbjct: 1 MAILIDERTRVVVQGITGHQGSFHTGQMIEYG-TRVVAGVSPGKEGQEVKG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A E+ A ASVI+VP DA++E++EA I L+V ITE +P+ D + + AR Sbjct: 56 TVEAAVEKHGATASVIFVPAPFTKDAVLEALEAGIKLVVVITEHVPLHDAMEIMARARLK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + +IGPN G+++P KIGIMP I+ G VGI++RSGTL+YE SQ G GQST Sbjct: 116 GATIIGPNTFGVISPGKSKIGIMPNQIYTPGRVGIVARSGTLSYEIAASLSQAGFGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGD V G FIDVL++F D TE++V+VGEIGG+AEEEAA+++K G KP+V Sbjct: 176 VGMGGDRVVGLSFIDVLKMFEQDRETEAVVLVGEIGGTAEEEAAEYIK-----GMSKPVV 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AGK APPG+ MGHAGA+I G+G + K+ A++ AG +A P ++ + E L Sbjct: 231 AYLAGKHAPPGKRMGHAGAIIERGRGTYQSKVEALEAAGAWVAALPWQVADLVREAL 287 >gi|170291006|ref|YP_001737822.1| succinyl-CoA synthetase, alpha subunit [Candidatus Korarchaeum cryptofilum OPF8] gi|170175086|gb|ACB08139.1| succinyl-CoA synthetase, alpha subunit [Candidatus Korarchaeum cryptofilum OPF8] Length = 291 Score = 268 bits (685), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 144/299 (48%), Positives = 197/299 (65%), Gaps = 12/299 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHP-KKGSTYWTGGNVNVPVF 59 M+ILV + +VLVQG+TG+ GT HT+ + Y T++V G+ P K G+ + +VPVF Sbjct: 1 MAILVREGMRVLVQGITGRQGTIHTKLMLEYG-TKIVAGVTPGKSGAKVY-----DVPVF 54 Query: 60 TTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 +V EA +E+ +AS+++VP A DA+IE+++ IPL+V ITEGIPV D + + Sbjct: 55 DSVEEAVREKGPIDASIVFVPAPYAMDAVIEAVDNAIPLVVVITEGIPVHDTAKFVSYAR 114 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +IGPNCPGI+ P KIGIMP F G VGI+SRSGTLTYE G G S Sbjct: 115 SMGTTIIGPNCPGIIAPGKVKIGIMPADSFAPGPVGIVSRSGTLTYEISLSLKNAGYGSS 174 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G FI+VLELF D T+++V+VGEIGG AEE AA+++ +G KP Sbjct: 175 TTIGIGGDPITGLNFIEVLELFKEDPETKAVVIVGEIGGDAEERAAKYI----AQGYPKP 230 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +V +VAG+TAPPG+ MGHAGA+I+ G+G E K A EAG+ +A +P + L E L Sbjct: 231 VVAYVAGRTAPPGKRMGHAGAIITAGQGTVESKERAFSEAGVPVARTPFEVAPLLAERL 289 >gi|326799823|ref|YP_004317642.1| succinyl-CoA synthetase, subunit alpha [Sphingobacterium sp. 21] gi|326550587|gb|ADZ78972.1| succinyl-CoA synthetase, alpha subunit [Sphingobacterium sp. 21] Length = 293 Score = 268 bits (685), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 161/300 (53%), Positives = 213/300 (71%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG G+FH Q I Y T VVGG+ P KG +++ PVF Sbjct: 1 MSVLVNKDSKVIVQGFTGTEGSFHASQMIEY-GTNVVGGVTPGKGGQT----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T AN S+I+VPP+ A DAI+E+ A + +IVCITEGIP DM++VK L+ Sbjct: 56 TVQDAVDTTGANVSIIFVPPAFAADAIMEAASAGVEVIVCITEGIPTKDMIQVKEYLKDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+T D KIGIMPG IF+KG+VG++S+SGTLTYEAV QT + GLG +TA Sbjct: 116 KSRLIGPNCPGIITADEAKIGIMPGFIFKKGNVGVVSKSGTLTYEAVDQTVKAGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE I+M+GEIGG E EAA+++K+ KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETEGIIMIGEIGGGMEAEAARWIKEHG----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAPPGR MGHAGA++ G A K+ M+E GI + SPA IG ++ E L + Sbjct: 232 GFIAGQTAPPGRRMGHAGAIVGGADDTAAAKMKIMRECGIRVVESPAEIGVAIAEELAKV 291 >gi|215402753|ref|ZP_03414934.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis 02_1987] Length = 352 Score = 268 bits (685), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 154/304 (50%), Positives = 203/304 (66%), Gaps = 18/304 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP----ARI 289 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P AR Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAARP 293 Query: 290 GRSL 293 GRSL Sbjct: 294 GRSL 297 >gi|289744683|ref|ZP_06504061.1| succinyl-CoA synthetase alpha subunit sucD [Mycobacterium tuberculosis 02_1987] gi|289685211|gb|EFD52699.1| succinyl-CoA synthetase alpha subunit sucD [Mycobacterium tuberculosis 02_1987] Length = 355 Score = 268 bits (684), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 154/304 (50%), Positives = 203/304 (66%), Gaps = 18/304 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNV-- 238 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP----ARI 289 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P AR Sbjct: 239 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAARP 296 Query: 290 GRSL 293 GRSL Sbjct: 297 GRSL 300 >gi|323357165|ref|YP_004223561.1| succinyl-CoA synthetase, alpha subunit [Microbacterium testaceum StLB037] gi|323273536|dbj|BAJ73681.1| succinyl-CoA synthetase, alpha subunit [Microbacterium testaceum StLB037] Length = 300 Score = 268 bits (684), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 146/307 (47%), Positives = 206/307 (67%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQVVGG++ +K T T G +V Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHT-ALMLKAGTQVVGGVNARKAGTTVTHKDASGNDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV-- 113 +PVF +V EA T A+ S+ +VPP+ DA++E+I+AEIPL+V ITEG+PV D Sbjct: 60 LPVFASVEEAMRETGADVSIAFVPPAFTKDAMVEAIDAEIPLLVVITEGVPVGDTAEAWA 119 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 A+ + +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +F+ Sbjct: 120 YAKSKGEKTRIIGPNCPGIITPGEALVGITPANITGKGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID L F AD T++IVM+GEIGG AEE AA ++ + Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDALAAFEADPETKAIVMIGEIGGDAEERAAAYIAENV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETASLM 293 Query: 294 VELLGSL 300 E++ +L Sbjct: 294 REIIEAL 300 >gi|329938122|ref|ZP_08287573.1| succinyl-CoA synthetase subunit alpha [Streptomyces griseoaurantiacus M045] gi|329302611|gb|EGG46501.1| succinyl-CoA synthetase subunit alpha [Streptomyces griseoaurantiacus M045] Length = 294 Score = 268 bits (684), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 147/299 (49%), Positives = 199/299 (66%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++K++KV+VQG+TG G HT + +L T+VVGG++P+K VPVF Sbjct: 1 MAIWLNKDSKVIVQGMTGATGMKHT-KLMLGDGTEVVGGVNPRKAGQTVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E+T AN SVI+VP DA++E+I+AEIPL V ITEGI V D A K Sbjct: 60 TVKEAIEKTGANVSVIFVPEKFTKDAVVEAIDAEIPLAVVITEGIAVHDSASFWAYAGKK 119 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI+TP +GI+PG I + G +G++S+SGTLTY+ +++ LG S Sbjct: 120 GNKTRIIGPNCPGIITPGQSNVGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--LGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA F+K+ KP Sbjct: 178 TAVGIGGDPIIGTTHIDALAAFEADPETDLIVMIGEIGGDAEERAADFIKENV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P + E+L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAKLAREIL 292 >gi|121609682|ref|YP_997489.1| succinyl-CoA synthetase subunit alpha [Verminephrobacter eiseniae EF01-2] gi|121554322|gb|ABM58471.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Verminephrobacter eiseniae EF01-2] Length = 298 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 149/301 (49%), Positives = 206/301 (68%), Gaps = 16/301 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++++TKV+ QG+TGK G FHTE+ Y ++ V G++P+K G +P+ Sbjct: 1 MSIYINQDTKVITQGITGKTGQFHTEKCQAYANGKSAFVAGVNPRKAGESIFG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EA +T A SVIYVPP+ A AI E++EA++ L +CITEGIPV DM+ V+ R+ Sbjct: 57 YASVGEAATQTGATVSVIYVPPAAAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNRMR 116 Query: 119 KS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TP+ KIGIMPG I RKG +G++SRSGTLTYEAV ++ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPEEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAMLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQSTAVGIGGDP+ G + IDV++ F D T+++VM+GEIGG E AA++ K Sbjct: 177 VGLGQSTAVGIGGDPINGLKHIDVMQAFNDDPGTDAVVMIGEIGGPDEAIAARWCKTHM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KP+VGF+AG TAPPG+ MGHAGA+IS G AE K+ M+E+G + +P+ +GR Sbjct: 236 ---TKPVVGFIAGVTAPPGKRMGHAGALISDGADTAEAKLAIMQESGFVVTRNPSELGRL 292 Query: 293 L 293 L Sbjct: 293 L 293 >gi|298524444|ref|ZP_07011853.1| succinyl-CoA ligase subunit alpha [Mycobacterium tuberculosis 94_M4241A] gi|298494238|gb|EFI29532.1| succinyl-CoA ligase subunit alpha [Mycobacterium tuberculosis 94_M4241A] Length = 309 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 155/310 (50%), Positives = 206/310 (66%), Gaps = 19/310 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNV-- 238 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP---ARIG 290 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P A + Sbjct: 239 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALA 296 Query: 291 RSLVELLGSL 300 R + LLGSL Sbjct: 297 REI--LLGSL 304 >gi|218884351|ref|YP_002428733.1| succinyl-CoA synthetase, alpha subunit [Desulfurococcus kamchatkensis 1221n] gi|218765967|gb|ACL11366.1| succinyl-CoA synthetase, alpha subunit [Desulfurococcus kamchatkensis 1221n] Length = 291 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 139/298 (46%), Positives = 201/298 (67%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M I+VD T+VLVQG+TG+ G FHT+ + Y T++V G P KG TY G VPV+ Sbjct: 1 MGIIVDSRTRVLVQGITGREGGFHTKLMLEYG-TKIVAGTSPGKGGTYVHG----VPVYN 55 Query: 61 TVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 ++ EA +E+ +AS+I+VP A DA+ E+++ + IV ITEGIP+ D +R Sbjct: 56 SINEAIREQGTIDASIIFVPARFASDAVYEAVDNGVKTIVVITEGIPLHDELRFVNYARS 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S LIGPN PGI+T K+GIMP +F+ G +GI+SRSGTLTYE + ++G G ST Sbjct: 116 RSVTLIGPNTPGIMTVGEAKLGIMPSHVFKPGRIGIVSRSGTLTYEVARELIKQGYGVST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +G+GGDPV G +FIDV ++F D++T+++V++GEIGG AEE A+F R KP+ Sbjct: 176 VLGLGGDPVTGLDFIDVFKMFSKDDSTDAVVLIGEIGGDAEERFARFYSQYDGR---KPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V ++AG+TAPPG+ MGHAGA+IS G G K ++++EAGI +A +P++I + L ++L Sbjct: 233 VAYIAGRTAPPGKRMGHAGAIISMGIGDYASKRSSLEEAGIPVADTPSQIHQLLSKIL 290 >gi|262201314|ref|YP_003272522.1| succinyl-CoA synthetase subunit alpha [Gordonia bronchialis DSM 43247] gi|262084661|gb|ACY20629.1| succinyl-CoA synthetase, alpha subunit [Gordonia bronchialis DSM 43247] Length = 304 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 152/311 (48%), Positives = 206/311 (66%), Gaps = 21/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKG-----STYWTGGNVN 55 MSI ++K+ K++VQG+TG GT HT +L + +VGG++ +K T G +V Sbjct: 1 MSIFLNKDNKIIVQGITGGEGTKHT-ALMLKAGSNIVGGVNARKAGTTVAHTAKDGSDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA + T A+ S+ +VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAIKETGADTSIAFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEKSSS-----RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 LEK S R+IGPNCPGI+TP+ +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 YNLEKGGSEGPKTRIIGPNCPGIITPEESLVGITPANITGKGPIGLVSKSGTLTYQMMYE 179 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 180 LRD--LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYVKA 237 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP--- 286 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P Sbjct: 238 NV----SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSET 293 Query: 287 ARIGRSLVELL 297 A++ R L E L Sbjct: 294 AKLARELYESL 304 >gi|215410542|ref|ZP_03419350.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis 94_M4241A] Length = 306 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 155/310 (50%), Positives = 206/310 (66%), Gaps = 19/310 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP---ARIG 290 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P A + Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALA 293 Query: 291 RSLVELLGSL 300 R + LLGSL Sbjct: 294 REI--LLGSL 301 >gi|325283197|ref|YP_004255738.1| succinyl-CoA synthetase, alpha subunit [Deinococcus proteolyticus MRP] gi|324315006|gb|ADY26121.1| succinyl-CoA synthetase, alpha subunit [Deinococcus proteolyticus MRP] Length = 301 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 146/294 (49%), Positives = 200/294 (68%), Gaps = 20/294 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M ILV+K++KV+VQG+TG G H+ +A+ TQVV G+ P KG + G P++ Sbjct: 1 MGILVNKDSKVIVQGMTGSEGAKHS-RAMKEFGTQVVAGVTPGKGGQDFEG----WPIYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR----VKAR 116 +VAEAKE+ AN S+I+VPP+GA DA++E+ A IPLIV ITEG+P +DM+R VKA Sbjct: 56 SVAEAKEKHGANVSIIFVPPAGAADAVLEAAHAGIPLIVLITEGVPTVDMMRAVQEVKAL 115 Query: 117 LEKSSS------RLIGPNCPGILTPDSCKIGIMPGSIFRK-GSVGILSRSGTLTYEAVFQ 169 +S RLIG NCPG++T K+GIMP I+ G +G++SRSGTLTYEA Sbjct: 116 DAESRKNGGEGIRLIGGNCPGLVTNGEAKVGIMPNRIYTNPGRIGLISRSGTLTYEAAKL 175 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + G+G ST VGIGGDPV GT F DVL +F ADE T+++V++GEIGG+ EE AA+++K+ Sbjct: 176 LNDAGMGTSTTVGIGGDPVIGTTFADVLPMFEADEGTDAVVVIGEIGGADEEAAAEYIKN 235 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 KKP+V F++G++AP G+ MGHAGA+I G G E K+ A K A + +A Sbjct: 236 N----MKKPVVAFISGRSAPAGKRMGHAGAIIMGDVGTPESKLAAFKAANVPVA 285 >gi|31792141|ref|NP_854634.1| succinyl-CoA synthetase subunit alpha [Mycobacterium bovis AF2122/97] gi|121636877|ref|YP_977100.1| succinyl-CoA synthetase subunit alpha [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989348|ref|YP_002644035.1| succinyl-CoA synthetase subunit alpha [Mycobacterium bovis BCG str. Tokyo 172] gi|289446524|ref|ZP_06436268.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis CPHL_A] gi|289573582|ref|ZP_06453809.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis K85] gi|289749476|ref|ZP_06508854.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis T92] gi|289753008|ref|ZP_06512386.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis EAS054] gi|77417495|sp|Q7U0Z0|SUCD_MYCBO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|31617729|emb|CAD93838.1| PROBABLE SUCCINYL-COA SYNTHETASE (ALPHA CHAIN) SUCD (SCS-ALPHA) [Mycobacterium bovis AF2122/97] gi|121492524|emb|CAL70992.1| Probable succinyl-CoA synthetase (alpha chain) sucD [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772461|dbj|BAH25267.1| succinyl-CoA synthetase subunit alpha [Mycobacterium bovis BCG str. Tokyo 172] gi|289419482|gb|EFD16683.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis CPHL_A] gi|289538013|gb|EFD42591.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis K85] gi|289690063|gb|EFD57492.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis T92] gi|289693595|gb|EFD61024.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis EAS054] Length = 303 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 152/307 (49%), Positives = 203/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKTNV-- 238 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 239 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALA 296 Query: 294 VELLGSL 300 E+L SL Sbjct: 297 REILLSL 303 >gi|215426223|ref|ZP_03424142.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis T92] gi|215429811|ref|ZP_03427730.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis EAS054] gi|260185852|ref|ZP_05763326.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis CPHL_A] gi|260204158|ref|ZP_05771649.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis K85] Length = 300 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 152/307 (49%), Positives = 203/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKTNV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILLSL 300 >gi|290558795|gb|EFD92189.1| succinyl-CoA synthetase, alpha subunit [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 289 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 143/298 (47%), Positives = 199/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DK+TKVLVQG+TG G FH+ +A++ T+VV G+ P KG G V VF Sbjct: 1 MAILIDKDTKVLVQGITGHQGKFHS-KAMIDLGTKVVAGVTPGKGGERVNG----VRVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 V A E+T ANASV++VP D++IE+I+A I LI ITE +P DM+++ + Sbjct: 56 DVKTAVEKTGANASVVFVPALMTRDSVIEAIDAGIKLITIITEHVPFQDMLKINEYAKLK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPG+ P K+GI+P +I +KG VG++SRSGTLTYE V ++ GLG+ST Sbjct: 116 DVKIIGPNCPGLAAPGIGKLGIIPNTILKKGVVGVISRSGTLTYEIVNVITETGLGESTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGD V G FIDVL+LF D+ T IV+VGEIGG+ EE+AA F+ ++ KKP+ Sbjct: 176 LGIGGDKVPGLNFIDVLKLFNEDKQTRGIVIVGEIGGNEEEKAADFI----RKNVKKPVF 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+ G APPG+ MGHAGA+ISG G A+ K+ A K+A + +A + + +V+ LG Sbjct: 232 AFIDGVYAPPGKRMGHAGAIISGKTGTAKSKLAAFKKANVPVAKTFDELSSLMVKKLG 289 >gi|163839117|ref|YP_001623522.1| succinyl-CoA synthetase subunit alpha [Renibacterium salmoninarum ATCC 33209] gi|162952593|gb|ABY22108.1| succinyl-CoA synthetase alpha chain [Renibacterium salmoninarum ATCC 33209] Length = 305 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 150/312 (48%), Positives = 205/312 (65%), Gaps = 19/312 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT IL TQVVGG++ +K T + G V Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHT-ALILKAGTQVVGGVNARKAGTTVSHTDAAGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF V EA E+T A+ S+I+VPP+ DA++E+IEA I L+V ITEG+PV D A Sbjct: 60 LPVFGGVTEAIEKTGADVSIIFVPPAFTKDAVVEAIEAGIGLVVIITEGVPVQDSAEFWA 119 Query: 116 RLE-------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + K +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ ++ Sbjct: 120 LAQSKVDADGKQVTRIIGPNCPGIITPGESLVGITPNNITSKGPIGLVSKSGTLTYQMMY 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + LG STA+GIGGDPV GT ID L F AD T++IVM+GEIGG AEE AA F+K Sbjct: 180 ELRD--LGFSTAIGIGGDPVIGTTHIDALAAFEADPETKAIVMIGEIGGDAEERAADFIK 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 238 ANV----TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSE 293 Query: 289 IGRSLVELLGSL 300 + L E+ +L Sbjct: 294 SAKLLREVFAAL 305 >gi|167967814|ref|ZP_02550091.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis H37Ra] gi|215410540|ref|ZP_03419348.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis 94_M4241A] gi|294996437|ref|ZP_06802128.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis 210] gi|297633474|ref|ZP_06951254.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis KZN 4207] gi|297730459|ref|ZP_06959577.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis KZN R506] gi|313657787|ref|ZP_07814667.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis KZN V2475] Length = 300 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 152/307 (49%), Positives = 203/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILLSL 300 >gi|15608092|ref|NP_215467.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis H37Rv] gi|15840376|ref|NP_335413.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis CDC1551] gi|148660731|ref|YP_001282254.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis H37Ra] gi|148822161|ref|YP_001286915.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis F11] gi|253800021|ref|YP_003033022.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis KZN 1435] gi|254363878|ref|ZP_04979924.1| succinyl-CoA synthetase (alpha chain) sucD [Mycobacterium tuberculosis str. Haarlem] gi|289555267|ref|ZP_06444477.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis KZN 605] gi|298524443|ref|ZP_07011852.1| succinyl-CoA synthetase, alpha subunit [Mycobacterium tuberculosis 94_M4241A] gi|308231677|ref|ZP_07413419.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu001] gi|308370119|ref|ZP_07420341.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu002] gi|308370544|ref|ZP_07421953.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu003] gi|308371807|ref|ZP_07426317.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu004] gi|308372977|ref|ZP_07430634.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu005] gi|308374142|ref|ZP_07435033.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu006] gi|308375298|ref|ZP_07443466.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu007] gi|308376559|ref|ZP_07439286.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu008] gi|308377557|ref|ZP_07479657.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu009] gi|308378769|ref|ZP_07483850.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu010] gi|308379913|ref|ZP_07488086.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu011] gi|308397513|ref|ZP_07492587.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu012] gi|2829505|sp|P71558|SUCD_MYCTU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|1524210|emb|CAB01998.1| PROBABLE SUCCINYL-CoA SYNTHETASE (ALPHA CHAIN) SUCD (SCS-ALPHA) [Mycobacterium tuberculosis H37Rv] gi|13880543|gb|AAK45227.1| succinyl-CoA synthetase, alpha subunit [Mycobacterium tuberculosis CDC1551] gi|134149392|gb|EBA41437.1| succinyl-CoA synthetase (alpha chain) sucD [Mycobacterium tuberculosis str. Haarlem] gi|148504883|gb|ABQ72692.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis H37Ra] gi|148720688|gb|ABR05313.1| succinyl-CoA synthetase alpha subunit sucD [Mycobacterium tuberculosis F11] gi|253321524|gb|ACT26127.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis KZN 1435] gi|289439899|gb|EFD22392.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis KZN 605] gi|298494237|gb|EFI29531.1| succinyl-CoA synthetase, alpha subunit [Mycobacterium tuberculosis 94_M4241A] gi|308216429|gb|EFO75828.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu001] gi|308325241|gb|EFP14092.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu002] gi|308331629|gb|EFP20480.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu003] gi|308335440|gb|EFP24291.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu004] gi|308339246|gb|EFP28097.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu005] gi|308342890|gb|EFP31741.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu006] gi|308346808|gb|EFP35659.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu007] gi|308350725|gb|EFP39576.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu008] gi|308355386|gb|EFP44237.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu009] gi|308359325|gb|EFP48176.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu010] gi|308363232|gb|EFP52083.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu011] gi|308366889|gb|EFP55740.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu012] gi|323720663|gb|EGB29741.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis CDC1551A] gi|328459763|gb|AEB05186.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis KZN 4207] Length = 303 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 152/307 (49%), Positives = 203/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNV-- 238 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 239 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALA 296 Query: 294 VELLGSL 300 E+L SL Sbjct: 297 REILLSL 303 >gi|296393908|ref|YP_003658792.1| succinyl-CoA synthetase subunit alpha [Segniliparus rotundus DSM 44985] gi|296181055|gb|ADG97961.1| succinyl-CoA synthetase, alpha subunit [Segniliparus rotundus DSM 44985] Length = 301 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 151/304 (49%), Positives = 205/304 (67%), Gaps = 14/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWT----GGNVN 55 MSI ++K++KV+VQG+TG GT HT +L T VVGG++ KK GST G +V Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHT-ALMLKAGTNVVGGVNAKKAGSTVSHKDKGGNDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TVAEAKE+T A+ S+++VPP+ AI+E+I+AEIPL+V ITEG+PV D V A Sbjct: 60 LPVFGTVAEAKEKTGADVSIVFVPPAFTKSAIVEAIDAEIPLLVVITEGVPVHDTVAAFA 119 Query: 116 --RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + + S +R+IGPNCPGI+TP +GI P +I G VG++S+SGTLTY+ +F+ Sbjct: 120 HNKAKGSKTRVIGPNCPGIITPGESLVGITPANIAGSGPVGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID ++ F D ATE IVM+GEIGG AEE AA ++K+ Sbjct: 179 -FGFSTAIGIGGDPVIGTTHIDAIKAFQEDPATEIIVMIGEIGGDAEERAAAYIKENV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P+ Sbjct: 236 --TKPVVAYVAGFTAPEGKTMGHAGAIVSGSAGTAAAKKVALEAVGVKVGKTPSGTAALA 293 Query: 294 VELL 297 E+L Sbjct: 294 REIL 297 >gi|118431319|ref|NP_147697.2| succinyl-CoA synthetase alpha chain [Aeropyrum pernix K1] gi|116062642|dbj|BAA80057.2| succinyl-CoA synthetase alpha chain [Aeropyrum pernix K1] Length = 292 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 137/290 (47%), Positives = 197/290 (67%), Gaps = 9/290 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD T+VLVQG+TG+ G+FH +A+L T+VV G+ P KG + G VPV+ Sbjct: 1 MAVLVDSETRVLVQGITGREGSFHA-KAMLEYGTKVVAGVTPGKGGSEVHG----VPVYD 55 Query: 61 TVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA E N S+++VP A DA+ E+++A I L+V ITEGIPV D +R + Sbjct: 56 SVKEALAEHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQ 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +IGPNCPG +TP K+GIMPG IF++G V ++SRSGTLTYE + +++G+GQST Sbjct: 116 KGATIIGPNCPGAITPGQAKVGIMPGHIFKEGGVAVVSRSGTLTYEISYMLTRQGIGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G F + L+LF D TE++V++GEIGG EE AA+ +K K KP+ Sbjct: 176 VIGIGGDPIVGLSFTEALKLFQEDPQTEALVLIGEIGGDMEERAAEMIK---KGEFTKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + ++AG+TAPP + MGHAGA+I G G E K+ A++EAG+ +A +P + Sbjct: 233 IAYIAGRTAPPEKRMGHAGAIIMMGTGTYEGKVKALREAGVEVAETPFEV 282 >gi|323136041|ref|ZP_08071124.1| succinyl-CoA synthetase, alpha subunit [Methylocystis sp. ATCC 49242] gi|322399132|gb|EFY01651.1| succinyl-CoA synthetase, alpha subunit [Methylocystis sp. ATCC 49242] Length = 295 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 145/301 (48%), Positives = 198/301 (65%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T +L+QG+TG G+FH ++ I Y + VV G+ P KG G VPVF Sbjct: 1 MSILIDEKTPILIQGITGDKGSFHAKEMIEY-GSNVVAGVTPGKGGKTHHG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA---RL 117 TV EA + T A AS+ +V P+ DAI+E+ +A I LI IT+GIP DM++VK R Sbjct: 56 TVKEAVKATGAQASITFVAPAFCADAIMEAADAGIRLICSITDGIPAQDMMKVKRYFLRF 115 Query: 118 EKSSS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K ++GPNC GI++P +GIMPG I+ KGSVG++SRSGTL YEA Q + GLG Sbjct: 116 PKDRRPMMVGPNCAGIISPGKAMLGIMPGHIYAKGSVGLISRSGTLGYEAASQLKELGLG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L LF D TE+++++GEIGG E EA+ ++K+ Sbjct: 176 ISTSVGIGGDPINGSSFLDHLVLFDKDPETEAVLLIGEIGGPQEAEASAWIKEN----FS 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++GFVAG TAP GR MGHAGA+IS A +K MK G+ +AP+PA G ++ ++ Sbjct: 232 KPVIGFVAGLTAPKGRRMGHAGAIISATGDSAAEKTEIMKSYGLTVAPNPAEFGTTVAKV 291 Query: 297 L 297 L Sbjct: 292 L 292 >gi|288560348|ref|YP_003423834.1| succinate-CoA ligase alpha subunit SucD [Methanobrevibacter ruminantium M1] gi|288543058|gb|ADC46942.1| succinate-CoA ligase alpha subunit SucD [Methanobrevibacter ruminantium M1] Length = 289 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 142/297 (47%), Positives = 200/297 (67%), Gaps = 11/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I++D+N K LVQG+TGK G+FHTEQ + Y T++V G+ P KG G VPVF ++ Sbjct: 2 IILDENVKCLVQGITGKQGSFHTEQMLKY-NTKIVAGVTPGKGGQEILG----VPVFDSI 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEG-IPVLDMVRVKARLEKSS 121 EAKE T NAS+I+VP A DA ESI+ + L++ IT P+ D + + A + Sbjct: 57 EEAKENTDVNASIIFVPAPFAKDAAFESID-HLDLVIIITRATFPIHDTMEIMAYAKAKG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +IGPN PG+++P K+GIMP IF +G+VG++SRSGTLTYE Q S+ +GQST V Sbjct: 116 VTVIGPNTPGVISPKVGKLGIMPTHIFSEGTVGVISRSGTLTYEIASQLSRAEIGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDPV GT +I+VL++F D T IV++GEIGGSAEE+AA ++K+ KP+V Sbjct: 176 GIGGDPVIGTPYIEVLQMFEDDPETTEIVLIGEIGGSAEEDAAAYIKENI----TKPVVA 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG +APPG+ MGHAGA+I+G G A+ K+ A++ AG+ +A P+ I + E+ G Sbjct: 232 YIAGISAPPGKRMGHAGAIIAGNSGTAKSKMEALESAGVKVARKPSEIVEYIKEIRG 288 >gi|291298134|ref|YP_003509412.1| succinyl-CoA synthetase subunit alpha [Stackebrandtia nassauensis DSM 44728] gi|290567354|gb|ADD40319.1| succinyl-CoA synthetase, alpha subunit [Stackebrandtia nassauensis DSM 44728] Length = 295 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 140/302 (46%), Positives = 201/302 (66%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +++N+K++VQG+TG GT HT + +L VVGG++P+K + +PVF Sbjct: 1 MTIFLNENSKIIVQGMTGAEGTKHTRR-MLASGANVVGGVNPRKAGSKVDFDGTELPVFA 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A+ +V++VPP A DA++E++ AEI L V ITEGIPV D V A+ + Sbjct: 60 TVAEAMTETGADTTVVFVPPKFAKDAVLEAVNAEIGLCVVITEGIPVHDSVTFWAQSQAK 119 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPG+++P GI+P I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GGKTRIIGPNCPGVISPGKSNAGIIPADITKPGKIGLVSKSGTLTYQLMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV GT ID L F D TE+IVM+GEIGG AEE AA F+K+ KP Sbjct: 178 TCVGIGGDPVIGTTHIDCLRAFQDDPETEAIVMIGEIGGDAEERAADFIKENV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAPPG+TMGHAGA+ISG G A+ K A++ AG+ + +P++ + E++ Sbjct: 234 VVGYIAGFTAPPGKTMGHAGAIISGSAGTADAKAKALEAAGVRVGKTPSQTAELMREVVK 293 Query: 299 SL 300 L Sbjct: 294 GL 295 >gi|47523876|ref|NP_999574.1| succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Sus scrofa] gi|2258467|gb|AAB94004.1| succinyl-CoA synthetase alpha subunit [Sus scrofa] Length = 350 Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 165/313 (52%), Positives = 213/313 (68%), Gaps = 27/313 (8%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QG TGK GTFH++QA+ Y V ++ +PVF TV Sbjct: 37 LYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVG-----GTTPGKGGKTHLGLPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL + Sbjct: 92 KEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGK 151 Query: 122 SRLIGPNCPGILT-------------------PDSCKIGIMPGSIFRKGSVGILSRSGTL 162 +RLIGPNCPG++ + KI ++ G+ R +GI+SRSGTL Sbjct: 152 TRLIGPNCPGVINRFLRFAVYITSRVFTCTQQEEYRKIPLLFGT--RSIHMGIVSRSGTL 209 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 TYEAV QT+Q GLGQS VGIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE Sbjct: 210 TYEAVHQTTQVGLGQSLCVGIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEEN 269 Query: 223 AAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 AA+FLK + KP+V F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ + Sbjct: 270 AAEFLKQHNSGPKSKPVVSFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVV 329 Query: 283 APSPARIGRSLVE 295 + SPA++G ++ + Sbjct: 330 SMSPAQLGTTIYK 342 >gi|218752617|ref|ZP_03531413.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis GM 1503] Length = 300 Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 151/307 (49%), Positives = 203/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+++AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAVDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILLSL 300 >gi|289761087|ref|ZP_06520465.1| succinyl-CoA synthetase (alpha chain) sucD [Mycobacterium tuberculosis GM 1503] gi|289708593|gb|EFD72609.1| succinyl-CoA synthetase (alpha chain) sucD [Mycobacterium tuberculosis GM 1503] Length = 303 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 151/307 (49%), Positives = 203/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+++AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAVDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNV-- 238 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 239 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALA 296 Query: 294 VELLGSL 300 E+L SL Sbjct: 297 REILLSL 303 >gi|158431280|pdb|2YV2|A Chain A, Crystal Structure Of Succinyl-Coa Synthetase Alpha Chain From Aeropyrum Pernix K1 Length = 297 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 137/290 (47%), Positives = 197/290 (67%), Gaps = 9/290 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD T+VLVQG+TG+ G+FH +A+L T+VV G+ P KG + G VPV+ Sbjct: 6 MAVLVDSETRVLVQGITGREGSFHA-KAMLEYGTKVVAGVTPGKGGSEVHG----VPVYD 60 Query: 61 TVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA E N S+++VP A DA+ E+++A I L+V ITEGIPV D +R + Sbjct: 61 SVKEALAEHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQ 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +IGPNCPG +TP K+GIMPG IF++G V ++SRSGTLTYE + +++G+GQST Sbjct: 121 KGATIIGPNCPGAITPGQAKVGIMPGHIFKEGGVAVVSRSGTLTYEISYMLTRQGIGQST 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G F + L+LF D TE++V++GEIGG EE AA+ +K K KP+ Sbjct: 181 VIGIGGDPIVGLSFTEALKLFQEDPQTEALVLIGEIGGDMEERAAEMIK---KGEFTKPV 237 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + ++AG+TAPP + MGHAGA+I G G E K+ A++EAG+ +A +P + Sbjct: 238 IAYIAGRTAPPEKRMGHAGAIIMMGTGTYEGKVKALREAGVEVAETPFEV 287 >gi|284046984|ref|YP_003397324.1| succinyl-CoA synthetase, subunit alpha [Conexibacter woesei DSM 14684] gi|283951205|gb|ADB53949.1| succinyl-CoA synthetase, alpha subunit [Conexibacter woesei DSM 14684] Length = 291 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 146/300 (48%), Positives = 202/300 (67%), Gaps = 10/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVD +T+++V G+TG+ GTFH Y TQVV G+ P KG G +PVF Sbjct: 1 MSVLVDNDTRLVVTGITGREGTFHATNNKRYG-TQVVAGVTPGKGGQDVEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+A++ ++ AN ++I+VPP A D+I+E+ +A I LI+ ITEGIP D +RV +L ++ Sbjct: 56 TIADSVDKAGANTAMIFVPPRFAADSILEAADAGIRLIIAITEGIPAHDELRVYTQLRRN 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RL+GPNCPGIL+P +GI+P S F+ G+VG++SRSGTLTY+ + +Q G G S+ Sbjct: 116 PDVRLVGPNCPGILSPGKASVGIIPASFFKPGNVGVVSRSGTLTYQIGNELAQRGFGNSS 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPV G+ FID++ELF D TE IVM GEIGGSAEEEAA+++ KP+ Sbjct: 176 IVGIGGDPVPGSSFIDIIELFEQDPETELIVMSGEIGGSAEEEAAEYIAANV----SKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V ++AG TAPPG+TMGHAGA++SG G A K A++ G+ + +P + LLGS Sbjct: 232 VAYIAGFTAPPGKTMGHAGAIVSGNAGTARAKAEALEAKGVKVGRTPTETAELAMSLLGS 291 >gi|298486520|ref|ZP_07004580.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158997|gb|EFI00058.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 255 Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 136/233 (58%), Positives = 170/233 (72%), Gaps = 5/233 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T ++N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVDTTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVILIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K + Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHVDQ 228 >gi|182436515|ref|YP_001824234.1| succinyl-CoA synthetase subunit alpha [Streptomyces griseus subsp. griseus NBRC 13350] gi|326777137|ref|ZP_08236402.1| succinyl-CoA synthetase, alpha subunit [Streptomyces cf. griseus XylebKG-1] gi|178465031|dbj|BAG19551.1| putative succinyl-CoA synthetase alpha chain [Streptomyces griseus subsp. griseus NBRC 13350] gi|326657470|gb|EGE42316.1| succinyl-CoA synthetase, alpha subunit [Streptomyces cf. griseus XylebKG-1] Length = 294 Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 144/301 (47%), Positives = 201/301 (66%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT + +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGATGMKHT-KLMLADGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 +VAEA E+T AN SV++VPP+ + A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 SVAEAMEKTGANVSVLFVPPAFSKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAYAGAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA F+K KP Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPETDLIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P + E+LG Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAKLAREILG 293 Query: 299 S 299 + Sbjct: 294 A 294 >gi|308176363|ref|YP_003915769.1| succinyl-CoA synthetase subunit alpha [Arthrobacter arilaitensis Re117] gi|307743826|emb|CBT74798.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Arthrobacter arilaitensis Re117] Length = 300 Score = 265 bits (678), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 144/307 (46%), Positives = 202/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K++KV+VQG+TG GT HT +L T +VGG++ +K T T G ++ V+ Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHT-ALMLKAGTNIVGGVNARKAGTTVTHGEQDIKVYG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 TVAEAK T A+ S+++VPP DA++E+IEAE+ L+V ITEG+PV D A + Sbjct: 60 TVAEAKAETGADVSIVFVPPKFTKDAVVEAIEAEVGLVVVITEGVPVQDSAEFWALAQSK 119 Query: 119 -----KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 VDADGNQITRIIGPNCPGIITPGEALVGITPNNITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID L F AD T++IVM+GEIGG AEE AA ++K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDALAAFEADPETKAIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ L Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAVLL 293 Query: 294 VELLGSL 300 E+ +L Sbjct: 294 REVFAAL 300 >gi|170750064|ref|YP_001756324.1| succinyl-CoA synthetase subunit alpha [Methylobacterium radiotolerans JCM 2831] gi|170656586|gb|ACB25641.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium radiotolerans JCM 2831] Length = 296 Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 139/301 (46%), Positives = 197/301 (65%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T ++VQG+TG GTFH ++ + Y T VVGG+ P KG G +PVF Sbjct: 1 MSILIDETTPIIVQGITGDKGTFHAKEMLDY-GTNVVGGVTPGKGGRTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 TV EA T A S+ +V P A DAI+E+ +A + L+ IT+GIP DM+RVK L Sbjct: 56 TVKEAVAATGATTSITFVAPPFAADAIMEAADAGLRLVCSITDGIPAQDMMRVKRYLYRY 115 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ + ++GPNC GI++P +GIMPG I+ G+VG++SRSGTL YEA Q + GLG Sbjct: 116 PKEKRTMVVGPNCAGIISPGKAMLGIMPGHIYLPGNVGVISRSGTLGYEAASQLKELGLG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L LF D T++++M+GEIGG E EA+ ++++ Sbjct: 176 ISTSVGIGGDPINGSSFLDHLALFETDPDTDAVLMIGEIGGPQEAEASAWIREN----MS 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++GFVAG TAP GR MGHAGA+IS A +K M+ G+ +AP P G+++ ++ Sbjct: 232 KPVIGFVAGLTAPKGRRMGHAGAIISAAGDSAAEKAEIMRSYGLTVAPDPGSFGQTVADV 291 Query: 297 L 297 L Sbjct: 292 L 292 >gi|311896478|dbj|BAJ28886.1| putative succinyl-CoA synthetase alpha chain [Kitasatospora setae KM-6054] Length = 297 Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 142/301 (47%), Positives = 201/301 (66%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT + +L TQ+VGG++P+K T VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGSEGMKHTRR-MLASGTQIVGGVNPRKAGTTVDVDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 TVAEA E+T A+ +VI+VPP+ A++E+I+AEIPL V ITEG+PV D A + Sbjct: 60 TVAEAIEKTGADVTVIFVPPAFTKSAVVEAIDAEIPLAVVITEGVPVHDTAAFWAHAGAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG+++P GI+P +I G +G++S+SGTLTY+ +++ LG S Sbjct: 120 GNKTRIIGPNCPGLISPGQSNAGIIPANITGPGKIGLVSKSGTLTYQLMYELRD--LGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L+ F D TE IVM+GEIGG AEE AA ++ + KP Sbjct: 178 SAVGIGGDPVIGTTHIDALKAFQEDPETELIVMIGEIGGDAEERAAAYIAEHV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ R EL+ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSETARLARELIA 293 Query: 299 S 299 + Sbjct: 294 A 294 >gi|295698454|ref|YP_003603109.1| succinyl-CoA synthetase alpha chain [Candidatus Riesia pediculicola USDA] gi|291157077|gb|ADD79522.1| succinyl-CoA synthetase alpha chain [Candidatus Riesia pediculicola USDA] Length = 289 Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 139/294 (47%), Positives = 205/294 (69%), Gaps = 10/294 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNT+V+ QGLTGK G+FH++ + Y T++V G+ P KG+TY G +P+F Sbjct: 1 MSILINKNTRVVCQGLTGKKGSFHSDIDMKY-GTKIVSGVVPGKGNTYHLG----IPIFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T AN SVIYVP +AI+E++++ I LI+ ITEGIP+LDM+ VK +L+++ Sbjct: 56 TVKEAVFYTKANTSVIYVPAIFCKEAILEAVDSGIELIIVITEGIPILDMMVVKKKLQEN 115 Query: 121 SSR-LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +IGPN PGI++P CKIGI P SI + G+VGI+SRSGTL YEAV Q S+ G+GQST Sbjct: 116 QDIIMIGPNSPGIISPGQCKIGIQPYSIHKIGAVGIISRSGTLMYEAVDQISRLGIGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGD + G +FI++L LF D T+ I+M+GEIGG+ EE+AA +++ + KP+ Sbjct: 176 CVGIGGDMISGCDFIEILPLFEDDIDTKVILMIGEIGGNREEKAASYIQSKV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 + ++AG P + MGHAGA++ E+K+ +++ GI + + ++IG ++ Sbjct: 232 LAYIAGLHVPRDQQMGHAGAILENVDLDIEEKMKFLEKNGIEVIQNISKIGENI 285 >gi|99034388|ref|ZP_01314404.1| hypothetical protein Wendoof_01000791 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 204 Score = 265 bits (676), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 131/209 (62%), Positives = 164/209 (78%), Gaps = 5/209 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+T+++ QG TG GTFH+EQAI Y T++VGG+ P KG + ++N+PVF Sbjct: 1 MSVLVNKDTRLICQGFTGAQGTFHSEQAIDY-GTKMVGGVTPGKGGST----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAKE+T ANA+VIYVP A AI+E+I+A+I LI+CITEGIP+LDMV+VK L S Sbjct: 56 TVAEAKEKTGANATVIYVPAKFAAAAILEAIDAKIELIICITEGIPILDMVKVKRALIGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRLIGPNCPGIITPEECKIGIMPGHIHKRGHIGIMSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESI 209 +GIGGDPV G F+D +ELFL D T I Sbjct: 176 IGIGGDPVHGITFVDCMELFLKDNDTHGI 204 >gi|152967941|ref|YP_001363725.1| succinyl-CoA synthetase subunit alpha [Kineococcus radiotolerans SRS30216] gi|151362458|gb|ABS05461.1| succinyl-CoA synthetase, alpha subunit [Kineococcus radiotolerans SRS30216] Length = 299 Score = 265 bits (676), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 146/306 (47%), Positives = 204/306 (66%), Gaps = 13/306 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKG--STYWTGGN---VN 55 MSI ++ ++KVLVQG+TG G HT Q +L TQVVGG+ P KG S +TG + V Sbjct: 1 MSIFINSDSKVLVQGMTGSEGRKHT-QRMLTSGTQVVGGVTPGKGGQSVEFTGADGSPVQ 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF++V EA+E T A+ SVI+VP A++E++EA PL+V ITEG+PV D A Sbjct: 60 VPVFSSVGEAREATGADVSVIFVPAKFTKGAVVEAVEAATPLVVVITEGVPVADSAEFYA 119 Query: 116 RLEKS-SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 KS ++RLIGPNCPG+++P +GI+P I G +G++S+SGTLTY+ +++ Sbjct: 120 LAAKSGTTRLIGPNCPGLISPGKSNVGIIPADITPPGRIGLVSKSGTLTYQMMYELRD-- 177 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G S+AVGIGGDPV GT ID L+ F D T+ IVM+GEIGG AEE AA+F++ Sbjct: 178 IGFSSAVGIGGDPVIGTTHIDALQAFQDDPETDVIVMIGEIGGDAEERAAKFIEANV--- 234 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K +A++ AG+ + +P+ Sbjct: 235 -TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKDALEAAGVKVGKTPSETAALAR 293 Query: 295 ELLGSL 300 E+ +L Sbjct: 294 EIFQAL 299 >gi|289641098|ref|ZP_06473266.1| succinyl-CoA synthetase, alpha subunit [Frankia symbiont of Datisca glomerata] gi|289509039|gb|EFD29970.1| succinyl-CoA synthetase, alpha subunit [Frankia symbiont of Datisca glomerata] Length = 291 Score = 265 bits (676), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 143/302 (47%), Positives = 203/302 (67%), Gaps = 13/302 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +D+ +K+LVQG+TG G HT + +L +++VGG +PKK T G VPVF Sbjct: 1 MAIWLDETSKILVQGITGSEGRKHTAR-MLRAGSKIVGGTNPKKAGTEVEG----VPVFA 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR--VKARLE 118 TVAE E+T A+ SV+YVPP+G A+IE+I+A IPL+V ITEG+PV D A+ Sbjct: 56 TVAETIEKTGADVSVVYVPPAGTKAAVIEAIDAGIPLVVVITEGVPVHDTTDFWAYAKSR 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +S+R+IGPNCPGI++P GI+P I +G +G++S+SGTLTY+ +++ G S Sbjct: 116 GNSTRIIGPNCPGIISPGRSNAGIIPADITPQGRIGLVSKSGTLTYQMMYELRD--FGFS 173 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV GT ID L F D T++IVM+GEIGG AEE AA ++++ KP Sbjct: 174 TCVGIGGDPVIGTTHIDALAAFETDPDTDAIVMIGEIGGDAEERAAAYIEEHV----TKP 229 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A+++AG+ + +P+ R + +++ Sbjct: 230 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTALAKKEALEKAGVRVGKTPSETARLMADVVR 289 Query: 299 SL 300 SL Sbjct: 290 SL 291 >gi|15826979|ref|NP_301242.1| succinyl-CoA synthetase subunit alpha [Mycobacterium leprae TN] gi|221229457|ref|YP_002502873.1| succinyl-CoA synthetase subunit alpha [Mycobacterium leprae Br4923] gi|4455692|emb|CAB36666.1| probable succinyl-CoA synthetase alpha subunit [Mycobacterium leprae] gi|13092526|emb|CAC29664.1| succinyl-CoA synthase [alpha] chain [Mycobacterium leprae] gi|219932564|emb|CAR70249.1| succinyl-CoA synthase [alpha] chain [Mycobacterium leprae Br4923] Length = 300 Score = 265 bits (676), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 150/307 (48%), Positives = 204/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 M+I + K+ V+VQG+TG HT + +L TQ+VGG++ +K T T G + Sbjct: 1 MAIFLTKDNTVIVQGITGSEAAVHTAR-MLKAGTQIVGGVNARKAGTNVTHEDKHGRIIT 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TVAEA E T A+ S+I+VPP A +AIIE++EAEIPL+V ITEGIPV D V A Sbjct: 60 LPVFGTVAEAIENTGADVSIIFVPPRFAKEAIIEAVEAEIPLLVIITEGIPVQDSVYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 L K + +R+IGPNCPGI+TP +GI P +I G +G++S+SGTLTY+ +F+ S Sbjct: 120 YNLNKGTKTRIIGPNCPGIITPGQSLVGITPATITGAGPIGLVSKSGTLTYQMMFELSD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTAIGIGGDPVIGTTHIDAIEAFEQDPDTKIIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K +A++ AG+ + +P+ + Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAVKKDALEAAGVKVGKTPSETAVLV 293 Query: 294 VELLGSL 300 E+L +L Sbjct: 294 REILCTL 300 >gi|297526342|ref|YP_003668366.1| succinyl-CoA synthetase, alpha subunit [Staphylothermus hellenicus DSM 12710] gi|297255258|gb|ADI31467.1| succinyl-CoA synthetase, alpha subunit [Staphylothermus hellenicus DSM 12710] Length = 296 Score = 265 bits (676), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 195/290 (67%), Gaps = 9/290 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M +LV+KNT+VLVQG+TG+ G+FHT+ + Y T++V G+ P KG G VPV+ Sbjct: 1 MGVLVNKNTRVLVQGITGREGSFHTKLMLEYG-TKIVAGVTPGKGGMNVYG----VPVYD 55 Query: 61 TVAEAKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EA E +AS+I+VP A DA+ E+I+A+I IV ITEGIPV + + +K Sbjct: 56 TVYEAIENIGEIDASIIFVPAKFASDAVFEAIDADIKTIVVITEGIPVHEELEFVKYAKK 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++ +IGPN PGI+ P KIGIMP +F+ G +G++SRSGTLTYE + ++G G ST Sbjct: 116 KNTVIIGPNTPGIMVPGETKIGIMPAHVFKPGKIGLISRSGTLTYEIARELGKKGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +G+GGDPV G F++ ELF+ D +T ++V++GEIGG AEE +F K A+ KKP+ Sbjct: 176 VIGLGGDPVTGLNFVEAYELFIKDPSTRAVVLIGEIGGDAEE---RFAKYYAELSMKKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 V +VAGKTAPPG+ MGHAGA+IS G G + K A+ +A I +A P+ I Sbjct: 233 VAYVAGKTAPPGKRMGHAGAIISMGVGDYQSKKQALLKANIPVAEKPSDI 282 >gi|254549932|ref|ZP_05140379.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 295 Score = 264 bits (675), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 148/294 (50%), Positives = 198/294 (67%), Gaps = 14/294 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPS 287 >gi|54026964|ref|YP_121206.1| succinyl-CoA synthetase subunit alpha [Nocardia farcinica IFM 10152] gi|54018472|dbj|BAD59842.1| putative succinyl-CoA synthetase alpha subunit [Nocardia farcinica IFM 10152] Length = 304 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 149/305 (48%), Positives = 207/305 (67%), Gaps = 17/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT +L T++VGG++ +K T + G V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHT-ALMLKAGTKIVGGVNARKAGTTVSHTDKDGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TVAEA + T A+ S+ +VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGTVAEAIKETGADVSIAFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +EK + +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 YNVEKGNKTRIIGPNCPGIITPGESLVGITPANITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G ST++GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTSIGIGGDPVIGTTHIDAIEAFEKDPETKLIVMIGEIGGDAEERAAAYIKANVT- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP---ARIG 290 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K +A++ AG+ + +P A + Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKDALEAAGVKVGKTPSETAALA 293 Query: 291 RSLVE 295 R ++E Sbjct: 294 REILE 298 >gi|254231259|ref|ZP_04924586.1| succinyl-CoA synthetase (alpha chain) sucD [Mycobacterium tuberculosis C] gi|124600318|gb|EAY59328.1| succinyl-CoA synthetase (alpha chain) sucD [Mycobacterium tuberculosis C] Length = 298 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 148/294 (50%), Positives = 198/294 (67%), Gaps = 14/294 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNV-- 238 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 239 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPS 290 >gi|322370344|ref|ZP_08044903.1| succinyl-CoA synthetase, alpha subunit [Haladaptatus paucihalophilus DX253] gi|320550052|gb|EFW91707.1| succinyl-CoA synthetase, alpha subunit [Haladaptatus paucihalophilus DX253] Length = 289 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 148/298 (49%), Positives = 202/298 (67%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD +T+V+VQG+TG G+FHTEQ + Y T VV G P KG G VPV+ Sbjct: 1 MSILVDDDTRVVVQGITGGEGSFHTEQMMEYG-TNVVAGAVPGKGGQEVQG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E A+ASVI+VPP+ AGDAI E+++ ++ L V ITEG+P DM +V RL ++ Sbjct: 56 TVNEAVEEEDADASVIFVPPAFAGDAIFEALDTDLDLAVAITEGVPTQDMSKVYKRLSET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+TP K+GI+PG+IF G+VG++SRSGTLTY+ V +Q G+GQ+TA Sbjct: 116 DTRLLGPNCPGIITPGEAKLGILPGNIFESGNVGLVSRSGTLTYQVVDSLTQRGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT+FID L LF D T+++VM G E + P+ Sbjct: 176 IGIGGDPIIGTDFIDALSLFEDDPDTDAVVMC----GEIGGEDEEEAAAFIAENMDTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G AE KINA+ +AG+ + +P + ++ + L Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAESKINALNDAGVPVGDTPEEVADNIEDFL 289 >gi|189219058|ref|YP_001939699.1| Succinyl-CoA synthetase, alpha subunit [Methylacidiphilum infernorum V4] gi|161075763|gb|ABX56629.1| succinyl-CoA synthetase subunit alpha [Methylacidiphilum infernorum V4] gi|189185916|gb|ACD83101.1| Succinyl-CoA synthetase, alpha subunit [Methylacidiphilum infernorum V4] Length = 299 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 142/295 (48%), Positives = 203/295 (68%), Gaps = 8/295 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+ K +V VQG+TGK G+FH Y T++ G+ P KG + + +P+F Sbjct: 1 MAILLKKTDRVAVQGITGKYGSFHARLCREY-GTKITAGVTPGKGGGVF---DETIPLFD 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EAKE+T N S+I+VP A DAI+E++ ++ L++CITEGIP+LDM ++K ++ + Sbjct: 57 TLKEAKEKTGCNVSLIFVPAPFAVDAIMEAVSCQMDLVICITEGIPILDMAKIKRKIVQQ 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +L+GPNCPG++TP K GIMPG I + G VGI+SRSGTLTYEAV+Q ++ GLGQS+ Sbjct: 117 GIKLVGPNCPGVITPGESKAGIMPGYIHKPGKVGIVSRSGTLTYEAVWQITRLGLGQSSC 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G +V+E+F D TE+++++GEIGG E+EAAQ++K+ KKP+ Sbjct: 177 VGIGGDPIHGLSLREVIEMFWEDPQTEAVLIIGEIGGGEEQEAAQWIKENP----KKPVA 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 FVAG TAP G+ MGHAGA+I G G K+ A +EAGI + S + IG+ + E Sbjct: 233 AFVAGLTAPLGKRMGHAGAIILGQSGTVAAKLEAFREAGIKVIHSVSEIGKGVGE 287 >gi|50308181|ref|XP_454091.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643226|emb|CAG99178.1| KLLA0E03235p [Kluyveromyces lactis] Length = 318 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 145/299 (48%), Positives = 199/299 (66%), Gaps = 10/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L++ +TKV+ QG TGK TFH + + Y T +VGG +PKK G PVF + Sbjct: 23 NLLLNHDTKVIFQGFTGKQATFHAKISQEYG-TNIVGGTNPKKAGQVHLGQ----PVFAS 77 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + T A A+ I+VPPS A AI E+IEA+IPL V ITEGIP DM+ + L+ + Sbjct: 78 VAEAVKETGATATGIFVPPSIAAPAIKEAIEAQIPLAVAITEGIPQHDMLYIAEMLKSQD 137 Query: 121 SSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI++P + C+IGI P SIF+ G +GI+S+SGTLTYEAV QT+ LGQS Sbjct: 138 KTRLVGPNCPGIISPSARCRIGIQPTSIFKPGKIGIVSKSGTLTYEAVQQTTITDLGQSL 197 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKP 238 +GIGGD GT+FID L LFL D TE I+++GEIGG+AE EAA++LK R + P Sbjct: 198 VIGIGGDAFPGTDFIDALTLFLNDPQTEGIILLGEIGGTAEIEAAEYLKSYNLTREKPLP 257 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 + F+AG A G MGH+GA++ G AE K A++ A + + SP +G++L++ Sbjct: 258 VASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKKALRSANVAVVESPGHLGKALLD 316 >gi|149914670|ref|ZP_01903200.1| succinyl-CoA synthetase subunit alpha [Roseobacter sp. AzwK-3b] gi|149811463|gb|EDM71298.1| succinyl-CoA synthetase subunit alpha [Roseobacter sp. AzwK-3b] Length = 293 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 139/301 (46%), Positives = 195/301 (64%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+D +TKVLV G TG+ GTFHT+ I + T VVGG+ P KG + G +PVF Sbjct: 1 MAILIDSDTKVLVTGFTGRIGTFHTQDMITH-GTNVVGGVTPGKGGSTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A T A + +VPP A D+I+E+ +A I VCI +GIP DM+RVK + + Sbjct: 56 TVKGAVAETGAELVISFVPPPFAADSIMEAADAGIKTCVCIADGIPAADMIRVKRYMRRY 115 Query: 121 SS----RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + RLIGPNC GI+TP G+MP I+ G VGI+ RSGTL YEA Q +G+G Sbjct: 116 KADRRMRLIGPNCAGIITPGQAFAGLMPPHIYMPGRVGIVGRSGTLGYEAASQMKAKGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+++GIGGDP+ G+ F D+LELF AD T+++VMVGEIGG E EAA++++ Sbjct: 176 VSSSIGIGGDPINGSSFRDILELFEADPDTDAVVMVGEIGGPQEAEAAEYIETH----MT 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+ +VAG +AP GR MGHAGA++S A++K+ +K +G+ I P+P+ G ++ ++ Sbjct: 232 KPVAAYVAGLSAPKGRRMGHAGAIVSAFGESAQEKVEILKSSGVTIVPTPSAFGETVAKM 291 Query: 297 L 297 L Sbjct: 292 L 292 >gi|294631007|ref|ZP_06709567.1| succinyl-CoA synthetase, alpha subunit [Streptomyces sp. e14] gi|292834340|gb|EFF92689.1| succinyl-CoA synthetase, alpha subunit [Streptomyces sp. e14] Length = 294 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 145/299 (48%), Positives = 198/299 (66%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++K++KV+VQG+TG G HT + +L T VVGG++P+K VPVF Sbjct: 1 MAIWLNKDSKVIVQGMTGATGMKHT-KLMLGDGTNVVGGVNPRKAGQTVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E+T A+ SVI+VP DA++E+I+AEIPL V ITEGI V D A K Sbjct: 60 TVKEAIEKTGADVSVIFVPEKFTKDAVVEAIDAEIPLAVVITEGIAVHDTAAFWAYAGKK 119 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI+TP +GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGIITPGQSNVGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA F+K+ KP Sbjct: 178 TAVGIGGDPIIGTTHIDALAAFQADPDTDLIVMIGEIGGDAEERAAAFIKENV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P + E+L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAKLAREIL 292 >gi|116669381|ref|YP_830314.1| succinyl-CoA synthetase subunit alpha [Arthrobacter sp. FB24] gi|116609490|gb|ABK02214.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Arthrobacter sp. FB24] Length = 300 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 144/307 (46%), Positives = 202/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K++KV+VQG+TG GT HT +L T +VGG++ +K T G+ + VF Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHT-ALMLKAGTNIVGGVNARKAGTTVLHGDNEITVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 TV EA T A+ S+++VPP+ DA++E+IEA I L+V ITEG+PV D A + Sbjct: 60 TVKEAMAETGADVSIVFVPPAFTKDAVVEAIEAGIGLVVVITEGVPVQDSAEFWALAQSK 119 Query: 119 -----KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 K +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 VDANGKQVTRIIGPNCPGIITPGEALVGITPANITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID LE F AD T++IVM+GEIGG AEE AA ++K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDALEAFEADPETKAIVMIGEIGGDAEERAADYIKAHV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + L Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAKLL 293 Query: 294 VELLGSL 300 E+ +L Sbjct: 294 REVYATL 300 >gi|300024656|ref|YP_003757267.1| succinyl-CoA synthetase, subunit alpha [Hyphomicrobium denitrificans ATCC 51888] gi|299526477|gb|ADJ24946.1| succinyl-CoA synthetase, alpha subunit [Hyphomicrobium denitrificans ATCC 51888] Length = 299 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 143/302 (47%), Positives = 196/302 (64%), Gaps = 13/302 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +++ T +L+QG TG+ GTFH ++ I Y + VVGG+ P KG T G PVF Sbjct: 1 MAIFINEKTPILIQGFTGRIGTFHAQEMIDY-GSNVVGGVTPGKGGTSHLG----RPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK--ARLE 118 TV A + T A AS+++VPP A DAI+E+ +A I VCIT+GIP DM+RVK R Sbjct: 56 TVKGAVDETGAEASIVFVPPPFAADAIMEAADAGIKYCVCITDGIPAQDMIRVKRYMRRY 115 Query: 119 KSSSRLI--GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K +R+I GPNC G ++P +GIMPG I+ G VGI+ RSGTL YEA Q G+G Sbjct: 116 KKEARMILTGPNCAGTISPGKAMLGIMPGHIYLPGRVGIVGRSGTLGYEAAAQLKALGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ DVLE F D T++I+M+GEIGG E EA F AK K Sbjct: 176 VSTSVGIGGDPINGSSHRDVLEHFENDPETDAILMIGEIGGPQEAEAGLF----AKEHMK 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ ++AG +AP GR MGHAGA++S A +K+ +K G+ IAP+P+ +G ++ ++ Sbjct: 232 KPVIAYIAGLSAPKGRRMGHAGAIVSAFGESAAEKVEILKGCGVAIAPTPSEMGSTVAQV 291 Query: 297 LG 298 LG Sbjct: 292 LG 293 >gi|331699079|ref|YP_004335318.1| succinyl-CoA synthetase subunit alpha [Pseudonocardia dioxanivorans CB1190] gi|326953768|gb|AEA27465.1| succinyl-CoA synthetase, alpha subunit [Pseudonocardia dioxanivorans CB1190] Length = 295 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 144/302 (47%), Positives = 202/302 (66%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +++N+KV+VQG+TG GT H + +L T +VGG++ +K T T G ++ VF Sbjct: 1 MSIFLNENSKVIVQGITGGEGTKHATK-MLAAGTNIVGGVNARKAGTTVTIGGKDLTVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 TV EA + T A+ SV++VPP A DA+IE+I+AEIPL V ITEGIPV D A + Sbjct: 60 TVEEAIKETGADVSVVFVPPKFAKDAVIEAIDAEIPLAVVITEGIPVHDSAYFWAHAVAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI++P GI+P I G +G++S+SGTLTY+ +++ + +G S Sbjct: 120 GNKTRIIGPNCPGIISPGKSNAGIIPADIAGPGKIGLVSKSGTLTYQMMYELRE--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDPV GT ID LE F AD T +IVM+GEIGG AEE AA F++ KP Sbjct: 178 TAIGIGGDPVIGTTHIDALEAFEADPETAAIVMIGEIGGDAEERAAAFIQANV----SKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + E++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAALMREIIA 293 Query: 299 SL 300 L Sbjct: 294 GL 295 >gi|254466505|ref|ZP_05079916.1| succinyl-CoA synthase, alpha subunit [Rhodobacterales bacterium Y4I] gi|206687413|gb|EDZ47895.1| succinyl-CoA synthase, alpha subunit [Rhodobacterales bacterium Y4I] Length = 297 Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 147/301 (48%), Positives = 196/301 (65%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+++KV+VQG+TGK FHT+ I Y V G + K G T VPVF Sbjct: 1 MSILLDRDSKVIVQGITGKIARFHTKDMIEYGTNVVGGVVPGKGGETVE-----GVPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E T ANAS+++VPP A D+I+E+ +A I VCIT+GIP DM+RVK + + Sbjct: 56 TVKEAVEATGANASLVFVPPPFAADSIMEAADAGIKYCVCITDGIPAQDMIRVKRYMYRY 115 Query: 120 -SSSRLI--GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 R+I GPNC G ++P +GIMPG I+ G+VGI+ RSGTL YEA Q + GLG Sbjct: 116 PKDKRMILTGPNCAGTISPGKALLGIMPGHIYLPGTVGIIGRSGTLGYEAAAQLKELGLG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+LE F D TE I M+GEIGG E EAA++++D Sbjct: 176 VSTSVGIGGDPINGSSFKDILEWFEKDPETEVIAMIGEIGGPQEAEAAEYIRDHV----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V +VAG TAP GRTMGHAGA+IS A +K+ + AG+ +A +PA IG ++ + Sbjct: 232 KPVVAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILSAAGVTVAENPAVIGETIASV 291 Query: 297 L 297 + Sbjct: 292 M 292 >gi|239943708|ref|ZP_04695645.1| succinyl-CoA synthetase subunit alpha [Streptomyces roseosporus NRRL 15998] gi|239990158|ref|ZP_04710822.1| succinyl-CoA synthetase subunit alpha [Streptomyces roseosporus NRRL 11379] gi|291447170|ref|ZP_06586560.1| succinyl-CoA synthetase subunit alpha [Streptomyces roseosporus NRRL 15998] gi|291350117|gb|EFE77021.1| succinyl-CoA synthetase subunit alpha [Streptomyces roseosporus NRRL 15998] Length = 294 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 143/301 (47%), Positives = 200/301 (66%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT + +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGATGMKHT-KLMLGDGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 +V EA E+T AN SV++VPP+ + A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 SVKEAMEKTGANVSVLFVPPAFSKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAYANEK 119 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA F+K KP Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P + E+LG Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAKLAREILG 293 Query: 299 S 299 + Sbjct: 294 A 294 >gi|302308680|ref|NP_985681.2| AFR134Cp [Ashbya gossypii ATCC 10895] gi|299790743|gb|AAS53505.2| AFR134Cp [Ashbya gossypii ATCC 10895] Length = 319 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 150/299 (50%), Positives = 194/299 (64%), Gaps = 10/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ K TKV+ QG TGK TFH + + Y TQVVGG +PKK G PVF + Sbjct: 23 NLLMPKGTKVIFQGFTGKQATFHAKISQEYG-TQVVGGTNPKKAGQVHLGQ----PVFAS 77 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA T A A+ I+VPP A AI E+IEAE+PL VC+TEGIP DM+ + L + Sbjct: 78 VAEAVRETGATATGIFVPPPIAAPAIREAIEAEVPLAVCVTEGIPQHDMLYIAEMLRTQD 137 Query: 121 SSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI+ P S +IGI P IF G +GI+S+SGTLTYEAV QTS GLGQS Sbjct: 138 KTRLVGPNCPGIINPGSNVRIGIQPTKIFTPGKIGIVSKSGTLTYEAVQQTSLVGLGQSL 197 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK-RGRKKP 238 +GIGGD GT+FID L LF+ D TE I+++GEIGG AE EAA+FLK + R P Sbjct: 198 VIGIGGDAFPGTDFIDALRLFMEDGVTEGIILLGEIGGKAEIEAAEFLKAYNQTRATPMP 257 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 + F+AG A G MGH+GA++ G AE K A++ AG+ + SP R+G +L++ Sbjct: 258 VASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKAALRAAGVAVVESPGRLGEALLK 316 >gi|282858270|ref|ZP_06267456.1| succinyl-CoA synthetase subunit alpha [Prevotella bivia JCVIHMP010] gi|282588979|gb|EFB94098.1| succinyl-CoA synthetase subunit alpha [Prevotella bivia JCVIHMP010] Length = 302 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 143/289 (49%), Positives = 199/289 (68%), Gaps = 9/289 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNT+++VQG+TG+ G+FH + Y T VVGG P KG G +PVF Sbjct: 13 MSILINKNTRLIVQGITGRDGSFHATKMKEYG-TNVVGGTSPGKGGQEVKG----IPVFN 67 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T AN S+I+VP + A DA++E+I+ + L++CITEG+P +D V + + Sbjct: 68 TVKEAVAATKANTSIIFVPAAFAKDAMLEAIDGGVELVICITEGVPTVDAVAAQRYAKLR 127 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPG+++P+ GIMP +IF+KG G++SRSGTLTYE V+ +QEGLGQSTA Sbjct: 128 GVKVIGPNCPGLISPEESMAGIMPTNIFKKGHTGVISRSGTLTYEVVYNLTQEGLGQSTA 187 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDPV G F D+L++F D T+SI ++GEIGG AEE AAQF+K KP+ Sbjct: 188 VGVGGDPVVGLYFEDLLQMFQDDPETDSIALIGEIGGDAEERAAQFIKAHV----TKPVA 243 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 F++G+ APPG+ MGHAGA+IS G G A++KI A + G+ +A + I Sbjct: 244 VFISGQQAPPGKQMGHAGAIISSGSGTAKEKIAAFEAVGVPVAKETSEI 292 >gi|312892445|ref|ZP_07751939.1| succinyl-CoA synthetase, alpha subunit [Mucilaginibacter paludis DSM 18603] gi|311295079|gb|EFQ72254.1| succinyl-CoA synthetase, alpha subunit [Mucilaginibacter paludis DSM 18603] Length = 292 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 160/300 (53%), Positives = 209/300 (69%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG GT+H Q I Y TQ+VGG+ P KG +++ PVF Sbjct: 1 MSVLVNKDSKVIVQGFTGNEGTYHASQMIEY-GTQLVGGVTPGKGGQ----SHLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A +T A+ S+I+VPP+ A DAI+E+ EA I +IVCITEGIP DMV+VK + Sbjct: 56 TVADAVAQTGADVSIIFVPPAFAADAIMEAAEAGIKVIVCITEGIPTKDMVQVKEYISDR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+T KIGIMPG IFRKG+VG++S+SGTLTYEAV Q + GLG +TA Sbjct: 116 DCRLIGPNCPGIITAGEAKIGIMPGFIFRKGNVGVVSKSGTLTYEAVDQVVKAGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D T I+M+GEIGG E EAA+++K+ KP+V Sbjct: 176 IGIGGDPIIGTPTKEAVELLMNDPETHGIIMIGEIGGGMEAEAARWIKEHG----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAP GR MGHAGA++ G A K+ M E GI + SPA IG ++ E L L Sbjct: 232 GFIAGQTAPAGRRMGHAGAIVGGADDTAAAKMKIMAECGIRVVESPAEIGAAMAEELAKL 291 >gi|289617630|emb|CBI61353.1| unnamed protein product [Sordaria macrospora] Length = 324 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 152/295 (51%), Positives = 200/295 (67%), Gaps = 15/295 (5%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFT 60 ++ ++ +TKV+ QG TGK GTFH + AI Y T+VVGG +PKK G T+ ++ PVF Sbjct: 36 NLKINSDTKVIFQGFTGKQGTFHAQGAIEYG-TKVVGGTNPKKAGQTH-----LDRPVFK 89 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 V+EA + T A A+ I+VPP A I E++ AEIP L R + +S Sbjct: 90 NVSEAVKETGATATAIFVPPPLAAAGIEEALNAEIPPRR--------LHYRRHPSAWTQS 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 142 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+M+GEIGGSAEEEAA FLK+ + KP+V Sbjct: 202 VGIGGDPFSGTNFIDCLKVFLEDGETDGIIMIGEIGGSAEEEAADFLKEYNTKNGGKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG +APP G AGA+++GGKG A KI A++ AG+ + SPA +G++L E Sbjct: 262 SFIAGISAPPWPPHGPAGAIVAGGKGDANSKIKALEAAGVVVERSPANLGKALRE 316 >gi|317122102|ref|YP_004102105.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Thermaerobacter marianensis DSM 12885] gi|315592082|gb|ADU51378.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Thermaerobacter marianensis DSM 12885] Length = 288 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 139/297 (46%), Positives = 197/297 (66%), Gaps = 10/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+D+ T+V+VQG+TG G+FHT Q I Y T+VV G+ P K G VPV+ Sbjct: 1 MAILIDERTRVVVQGITGHQGSFHTGQMIDYG-TRVVAGVSPGKEGQEVRG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A E+ A AS+I+VP DA++E+++A I L+V ITE +P+ D + + AR Sbjct: 56 TVEAAVEKHGATASIIFVPAPFTKDAVLEALDAGIKLVVVITEHVPLHDAMEIMARARLK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + +IGPN G+++P KIGIMP I+ G VGI++RSGTL+YE + G GQST Sbjct: 116 GATIIGPNTFGVISPGKSKIGIMPNQIYTPGRVGIVARSGTLSYEIAASLTHAGFGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGD V G FIDVL++F D+ TE++V+VGEIGG+AEEEAA+++K G KP+V Sbjct: 176 VGMGGDRVVGLSFIDVLKMFEQDKETEAVVLVGEIGGTAEEEAAEYIK-----GMSKPVV 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AGK APPG+ MGHAGA+I G+G + K+ A++ AG +A P ++ + E L Sbjct: 231 AYLAGKHAPPGKRMGHAGAIIERGRGTYQSKVEALEAAGARVAALPWQVAELVREAL 287 >gi|320101246|ref|YP_004176838.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Desulfurococcus mucosus DSM 2162] gi|319753598|gb|ADV65356.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Desulfurococcus mucosus DSM 2162] Length = 292 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 139/298 (46%), Positives = 199/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M +LVD T+V+VQG+TG+ G+FHT+ + Y T++V G P KG +Y G VPV+ Sbjct: 1 MGVLVDSATRVVVQGVTGREGSFHTKLMLEYG-TRIVAGTSPGKGGSYVHG----VPVYN 55 Query: 61 TVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 ++ EA +E+ A +AS+++VP AGDA+ E+++ + +V ITEGIP+ D +R Sbjct: 56 SIWEAVREQGAVDASIVFVPARFAGDAVYEAVDNGVRTVVVITEGIPLHDELRFVNYARS 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GPN PG++T K+GIMP +F+ G VGI+SRSGTLTYE + S+ G G ST Sbjct: 116 RGVVVVGPNTPGVMTVGEAKLGIMPAHVFKPGRVGIVSRSGTLTYEIARELSKHGYGVST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +G+GGDPV G +FID +LF AD T+++V+VGEIGG AEE A F A+R KP+ Sbjct: 176 VLGLGGDPVTGLDFIDAAKLFFADSGTDALVVVGEIGGDAEERFAGFYAGLAER---KPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V +VAG+TAPPG+ MGHAGA+IS G G K +++EAGI +A +P+++ L LL Sbjct: 233 VAYVAGRTAPPGKRMGHAGAIISMGMGDYASKRRSLEEAGIPVAETPSQVPVLLGRLL 290 >gi|21223187|ref|NP_628966.1| succinyl-CoA synthetase subunit alpha [Streptomyces coelicolor A3(2)] gi|256785714|ref|ZP_05524145.1| succinyl-CoA synthetase subunit alpha [Streptomyces lividans TK24] gi|289769606|ref|ZP_06528984.1| succinyl-CoA synthetase subunit alpha [Streptomyces lividans TK24] gi|8218210|emb|CAB92672.1| succinyl CoA synthetase alpha chain [Streptomyces coelicolor A3(2)] gi|289699805|gb|EFD67234.1| succinyl-CoA synthetase subunit alpha [Streptomyces lividans TK24] Length = 294 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 144/299 (48%), Positives = 203/299 (67%), Gaps = 12/299 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++K++KV+VQG+TG G HT + +L T+VVGG++P+K T VPVF Sbjct: 1 MAIWLNKDSKVIVQGMTGATGMKHT-KLMLGDGTEVVGGVNPRKAGTSVDFDGNEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E+T AN SVI+VP DA++E+I+AEIPL V ITEGI V D + K Sbjct: 60 TVKEAIEKTGANVSVIFVPEKFTKDAVVEAIDAEIPLAVVITEGIAVHDSAAFWSYAGKK 119 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI+TP +GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGIITPGQSNVGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA+++ + KP Sbjct: 178 TAVGIGGDPIIGTTHIDALAAFEADPETDLIVMIGEIGGDAEERAAEYI----SKNVTKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP---ARIGRSLV 294 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P A++ R+++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAKLARAIL 292 >gi|124268440|ref|YP_001022444.1| succinyl-CoA synthetase subunit alpha [Methylibium petroleiphilum PM1] gi|124261215|gb|ABM96209.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methylibium petroleiphilum PM1] Length = 296 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 138/301 (45%), Positives = 199/301 (66%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T V+VQG TG TFH ++ I Y T VVGG+ P KG ++ PVF Sbjct: 1 MSILIDEKTPVIVQGFTGDKATFHAKEMIAYG-TNVVGGVTPGKGGQR----HLERPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A AS+++VPP A DA++E+ +A + L+ IT+GIP DM+RVK L + Sbjct: 56 TVKEAVRDTGAEASLLFVPPPFAADALMEAADAGLKLVCIITDGIPAQDMMRVKRYLRRY 115 Query: 121 S----SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + ++GPNC GI++ +GIMPG+I+++G+VGI+SRSGTL YEA Q G+G Sbjct: 116 AKEQRTTIVGPNCAGIISAGKAMLGIMPGNIYQRGNVGIVSRSGTLGYEAAAQMKALGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 +T+VGIGGDP+ G+ F+D LE F D T++++M+GEIGG E EA+ +++ Sbjct: 176 VTTSVGIGGDPINGSSFLDHLERFEQDPETKAVIMIGEIGGPQEAEASAWVQAHM----S 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VG+VAG TAP GR MGHAGA+IS A +K M+ G+ ++PS A +G+++ + Sbjct: 232 KPVVGYVAGLTAPKGRRMGHAGAIISAVGDTAAEKAEIMRSYGLLVSPSAAELGKTVAQA 291 Query: 297 L 297 L Sbjct: 292 L 292 >gi|296108875|ref|YP_003615824.1| succinyl-CoA synthetase, alpha subunit [Methanocaldococcus infernus ME] gi|295433689|gb|ADG12860.1| succinyl-CoA synthetase, alpha subunit [Methanocaldococcus infernus ME] Length = 284 Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 140/295 (47%), Positives = 202/295 (68%), Gaps = 12/295 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+++ T+ +VQG+TG+ G+FHT++ +L T++VGG+ P KG G VPVF TV Sbjct: 2 ILLNEKTRAIVQGITGRQGSFHTKK-MLEAGTKIVGGVTPGKGGQEVHG----VPVFDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA + T ANASVI+VP A DA+ E++++ I LIV ITE IPV D + E + Sbjct: 57 KEAVDETNANASVIFVPAPFAKDAVFEAMDSGIELIVVITEHIPVHDTMEFVNYAEDYGA 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++IGPN PGI +P K+GI+P + +G+VGI+SRSGTLTYE Q G ST VG Sbjct: 117 KIIGPNTPGIASPKVGKLGIIPMEVLSEGNVGIVSRSGTLTYEVANQIKS--FGVSTCVG 174 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP+ G ++D+L++F D+ TE++V++GEIGGSAEE AA+++K+ KP++ + Sbjct: 175 IGGDPIVGLSYVDILKMFEEDKETEAVVLIGEIGGSAEERAAEYIKE-----MSKPVIAY 229 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG++AP G+ MGHAGA+I GGKG A+ K+ A+K+AG +A S I + L E+L Sbjct: 230 IAGRSAPEGKRMGHAGAIIEGGKGTAKSKMEALKKAGAYVANSIIDIPKILEEIL 284 >gi|167041902|gb|ABZ06641.1| putative CoA-binding domain protein [uncultured marine microorganism HF4000_133I24] Length = 297 Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 137/301 (45%), Positives = 195/301 (64%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D T ++VQG TGK G+FH E+ I Y T +VGG+ P KG G +PVF Sbjct: 1 MSILIDNKTNIIVQGFTGKFGSFHAEEMIKY-GTNIVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ++T A AS+++VPP A D+ +E+ +A I V IT+GIP DM+++K + + Sbjct: 56 TVKDAVKKTGATASILFVPPEFAADSAMEAADAGIKTCVAITDGIPSHDMIKIKRYMRRY 115 Query: 121 SSR----LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S + LIGPNC GI++P +GIMPG I+ +G VG++ RSGTL YEA Q +G Sbjct: 116 SKKDKMTLIGPNCAGIISPGKALLGIMPGHIYMQGKVGVIGRSGTLGYEAAQQMKNLNIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G F D+LE F D+ T++I+M+GEIGG E A +F AK Sbjct: 176 ISTSVGIGGDPINGCSFRDILEKFEQDDQTKAILMIGEIGGPQEVAAGKF----AKENMS 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V ++AG TAP GR MGHAGA++S A +K+ +KE G+ I+ +P+ +G ++ + Sbjct: 232 KPVVAYIAGLTAPIGRVMGHAGAIVSAYGESAVEKVELLKECGVTISKNPSVMGETVKSV 291 Query: 297 L 297 L Sbjct: 292 L 292 >gi|323701753|ref|ZP_08113424.1| succinyl-CoA synthetase, alpha subunit [Desulfotomaculum nigrificans DSM 574] gi|323533289|gb|EGB23157.1| succinyl-CoA synthetase, alpha subunit [Desulfotomaculum nigrificans DSM 574] Length = 290 Score = 262 bits (669), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 141/297 (47%), Positives = 195/297 (65%), Gaps = 10/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I++D +T +LVQG+TGK G+FHT Q + Y ++V G+ P KG G VPVF Sbjct: 1 MAIIIDHDTVILVQGITGKQGSFHTAQMLAYG-SRVAAGVSPGKGGQSVHG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E AS+I++P G DA E+I A I +V ITE +P+ D + + A EK Sbjct: 56 TVAEAVEHYPITASIIFIPAPGVKDAAFEAISAGIKTLVIITEHVPLHDELDIMAYAEKW 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPN GI++P K+GIMP SI++ GSVG+++RSGTL+YE V+ + GLGQST Sbjct: 116 GVTVIGPNTFGIISPGQSKMGIMPNSIYQPGSVGVVARSGTLSYEIVYNLTAAGLGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGD V G F+DVL F D TE+IV+VGEIGG+AEEEA+ ++K+ KP++ Sbjct: 176 VGLGGDRVVGLSFVDVLRQFETDPNTEAIVLVGEIGGNAEEEASLYIKE-----MTKPVM 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APPG+ MGHAGA+I GKG + K+ A+ AG +A P + + + E L Sbjct: 231 AFLAGSSAPPGKRMGHAGAIIERGKGTFQSKVAALTAAGAKVANLPWEVPQLVKESL 287 >gi|328884533|emb|CCA57772.1| Succinyl-CoA ligase [Streptomyces venezuelae ATCC 10712] Length = 294 Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 143/299 (47%), Positives = 202/299 (67%), Gaps = 12/299 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT + +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGATGMKHT-KLMLGDGTNIVGGVNPRKAGTTVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD--MVRVKARLE 118 +VAEA + T AN SV++VPP+ A A++E+I+AEIPL V ITEGI V D A+ + Sbjct: 60 SVAEAMKETGANVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAYAQAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA F+K KP Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP---ARIGRSLV 294 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P A++ R+++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAKLARAIL 292 >gi|303243898|ref|ZP_07330238.1| succinyl-CoA synthetase, alpha subunit [Methanothermococcus okinawensis IH1] gi|302485834|gb|EFL48758.1| succinyl-CoA synthetase, alpha subunit [Methanothermococcus okinawensis IH1] Length = 286 Score = 261 bits (668), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 138/295 (46%), Positives = 197/295 (66%), Gaps = 10/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NT+ +VQG+TGK G+FHT+ +L C T +V G+ P KG G +PV+ TV Sbjct: 2 ILLDENTRAIVQGITGKQGSFHTKN-MLECGTNIVAGVTPGKGGKEIYG----IPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 AE E+ ANASVI+VP A DA E+I+A I L+V ITE IPV D + + ++ Sbjct: 57 AETVEKHGANASVIFVPAPFAKDAAYEAIDAGIELVVIITEHIPVHDTMDIINYAKQKGV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++IGPN PGI +P K+GI+P + ++G +G++SRSGTLTYE + G GQS+ VG Sbjct: 117 KIIGPNTPGIASPKVGKLGIIPMKVLKEGRIGMVSRSGTLTYEIANELISNGFGQSSCVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP G ++++LE+F D+ T++IVM+GEIGGS EE AA+++K KKP++ + Sbjct: 177 IGGDPTIGLGYVEILEMFENDKDTDAIVMIGEIGGSNEEIAAEYIKK-----MKKPVIAY 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG+TAP G+ MGHAGA+I G G AE K+N +K AG + + I +L E+L Sbjct: 232 IAGQTAPEGKRMGHAGAIIERGVGTAESKMNTLKNAGAHVVRKISEIPSALKEIL 286 >gi|257054563|ref|YP_003132395.1| succinyl-CoA synthetase subunit alpha [Saccharomonospora viridis DSM 43017] gi|256584435|gb|ACU95568.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Saccharomonospora viridis DSM 43017] Length = 295 Score = 261 bits (668), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 145/302 (48%), Positives = 199/302 (65%), Gaps = 12/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++ +K++VQGLTG G+ H + +L + +VGG++ +K T G ++ VF Sbjct: 1 MSIFLNSESKIIVQGLTGSEGSKHAAK-MLAAGSNIVGGVNARKAGQTVTIGGKDLTVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TV EA + T AN SVI+VPP A DA+IE+I+AEIPL V ITEGIPV D A + Sbjct: 60 TVEEAMKETGANVSVIFVPPKFAKDAVIEAIDAEIPLAVVITEGIPVHDSAAFWAHACAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI++P GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGIISPGQSNAGIIPADITGPGKIGLVSKSGTLTYQMMYELRD--IGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDP+ GT ID LE F AD TE IVM+GEIGG AEE AA+++K KP Sbjct: 178 TAVGIGGDPIIGTTHIDALEAFQADPETELIVMIGEIGGDAEERAAEYIKANVT----KP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP---ARIGRSLVE 295 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P A + R L + Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAELARELYK 293 Query: 296 LL 297 L Sbjct: 294 AL 295 >gi|83952286|ref|ZP_00961018.1| succinyl-CoA synthetase alpha subunit [Roseovarius nubinhibens ISM] gi|83837292|gb|EAP76589.1| succinyl-CoA synthetase alpha subunit [Roseovarius nubinhibens ISM] Length = 294 Score = 261 bits (668), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 136/303 (44%), Positives = 195/303 (64%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKN+KVLV GLTG+ G+FH ++ Y T VVGG+ P KG G +PVF Sbjct: 1 MAILIDKNSKVLVTGLTGRIGSFHAQEMRDY-GTNVVGGVTPGKGGMVHNG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A T A+ + +VPP A D+I+E+ +A I +CI +GIP DM+RVK + + Sbjct: 56 TVKGAVAETGADMVIAFVPPPFAADSIMEAADAGIRTCICIADGIPTQDMIRVKRYMRRY 115 Query: 121 SS----RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + RLIGPNC GI+TP G+MP I+ G VGI+ RSGTL YEA Q G+G Sbjct: 116 KAENRMRLIGPNCAGIITPGQGFAGLMPPHIYLPGRVGIIGRSGTLGYEAASQMKARGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+++GIGGDP+ G+ F D+LELF D T+++V+VGEIGG E EAA++++D Sbjct: 176 VSSSIGIGGDPINGSSFRDILELFENDPETDAVVLVGEIGGPQEAEAAEYIRDHM----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+ ++AG +AP GR MGHAGA++S A++K+ +K+ G+ I P+P+ G ++ + Sbjct: 232 KPVAAYIAGLSAPKGRRMGHAGAIVSAFGESAQEKVEILKDCGVTIVPTPSAFGEAVETM 291 Query: 297 LGS 299 L + Sbjct: 292 LAA 294 >gi|83699279|dbj|BAE54377.1| succinyl-CoA synthetase alpha subunit [Pelotomaculum thermopropionicum] Length = 290 Score = 261 bits (668), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 138/298 (46%), Positives = 200/298 (67%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I++D+NT+VLVQG+TG G FHT Q + Y T++V G+ P KG G +PV+ Sbjct: 1 MAIIIDENTQVLVQGITGNQGVFHTRQMLAY-GTKIVAGVTPGKGGATVEG----IPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E +ASV+++P DA ES+EA +P++V +TEG+PV D +++ A ++ Sbjct: 56 SVREACENHRIDASVLFIPAPFTKDAAFESLEAGVPVVVIVTEGVPVHDEIQIVAFAKRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + ++GPN GI + CKIGI P F +G VG++SRSGTLTYE V + GLGQST Sbjct: 116 GAIVLGPNTFGICSSGKCKIGIPPNQYFVEGPVGVVSRSGTLTYETVGNLTANGLGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGD V G FIDVL++F D T+++V++GEIGG+AEE A++++K+ + KP+V Sbjct: 176 VGMGGDRVVGLTFIDVLKMFEKDPQTKAVVLLGEIGGNAEETASEYIKEMS-----KPVV 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AGK+APPG+ MGHAGA+I GKG + K+ A+ AG +A P+ I + E LG Sbjct: 231 AFIAGKSAPPGKRMGHAGAIIERGKGTYQGKVEALTAAGAKVATLPSEIPALIKEALG 288 >gi|110638791|ref|YP_679000.1| succinyl-CoA synthetase subunit alpha [Cytophaga hutchinsonii ATCC 33406] gi|110281472|gb|ABG59658.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [Cytophaga hutchinsonii ATCC 33406] Length = 293 Score = 261 bits (668), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 152/297 (51%), Positives = 208/297 (70%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K++VQG TG GTFH +Q I Y T VVGG+ P KG + +++ P+F Sbjct: 1 MSVLVNKNSKIIVQGFTGTEGTFHAQQMIEY-GTNVVGGVTPGKGGS----SHLDRPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA +T A+ S+I+VPP+ A DAI+E+ + I +I+CITEGIPV DM+ KA + K Sbjct: 56 TVAEAVAKTGADVSIIFVPPAFAADAIMEAADGGIKVIICITEGIPVRDMIDAKAYVTKR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP+ K+GIMPG IF+KG +GI+S+SGTLTYEA Q + G G STA Sbjct: 116 KVTLIGPNCPGVITPEEAKVGIMPGFIFKKGRIGIVSKSGTLTYEAADQVVKAGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D T+ I+M+GEIGG E +AA+++K KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETDGIIMIGEIGGQLEGDAAKWIKANG----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++ G A K+ M E GI + SPA IG ++ + + Sbjct: 232 GFIAGQTAPPGRRMGHAGAIVGGADDTAAAKMKIMAECGIHVVQSPADIGETMAKAM 288 >gi|294814561|ref|ZP_06773204.1| Succinyl-CoA ligase ADP-forming subunit alpha [Streptomyces clavuligerus ATCC 27064] gi|326442951|ref|ZP_08217685.1| succinyl-CoA synthetase subunit alpha [Streptomyces clavuligerus ATCC 27064] gi|294327160|gb|EFG08803.1| Succinyl-CoA ligase ADP-forming subunit alpha [Streptomyces clavuligerus ATCC 27064] Length = 294 Score = 261 bits (668), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 143/299 (47%), Positives = 201/299 (67%), Gaps = 12/299 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT + +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGATGMKHT-KLMLGDGTNIVGGVNPRKAGTTVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TVAEA E+T A+ SV++VPP+ A A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 TVAEAMEKTGADVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAHAVSK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G + Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGKIGLVSKSGTLTYQMMYELRD--IGFT 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + VGIGGDPV GT ID L F AD TE IVM+GEIGG AEE AA F+K KP Sbjct: 178 SCVGIGGDPVVGTTHIDALAAFEADPETELIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP---ARIGRSLV 294 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P A++ R+++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVQVGKTPTETAKLARAIL 292 >gi|307823359|ref|ZP_07653588.1| succinyl-CoA synthetase, alpha subunit [Methylobacter tundripaludum SV96] gi|307735344|gb|EFO06192.1| succinyl-CoA synthetase, alpha subunit [Methylobacter tundripaludum SV96] Length = 295 Score = 261 bits (668), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 144/304 (47%), Positives = 195/304 (64%), Gaps = 13/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+D+ T+++VQG TGK G+FH + I Y + VVGGI P KG G +PVF Sbjct: 1 MAILIDETTRIIVQGFTGKIGSFHAQDMINY-GSNVVGGITPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA A AS+I+VPP+ A D+I+E+ +A I V IT+GIP DM+ VK L + Sbjct: 56 TVKEAVREVGAEASIIFVPPAFAADSIMEAADAGIKYCVAITDGIPTQDMMTVKNFLRRF 115 Query: 120 -SSSRLI--GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 R+I GPNC G ++P +GIMPG I+ +G+VGI+ RSGTL YEA Q + G+G Sbjct: 116 PVEKRMILTGPNCAGTISPGRAMLGIMPGHIYMQGNVGIVGRSGTLGYEAADQMKRLGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ D+LE F AD T+ +VM+GEIGG E EA F AK Sbjct: 176 ISTSVGIGGDPINGSSHRDILEKFEADPETKVVVMIGEIGGPQEVEAGMF----AKEHMT 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ ++AG TAP GR MGHAGA+IS A +K+ +KE G+ I P+PA +G ++ + Sbjct: 232 KPVIAYIAGLTAPEGRRMGHAGAIISSAGESAAEKVAILKELGVTICPTPAAMGETVAAV 291 Query: 297 LGSL 300 L L Sbjct: 292 LARL 295 >gi|256397086|ref|YP_003118650.1| succinyl-CoA synthetase subunit alpha [Catenulispora acidiphila DSM 44928] gi|256363312|gb|ACU76809.1| succinyl-CoA synthetase, alpha subunit [Catenulispora acidiphila DSM 44928] Length = 295 Score = 261 bits (668), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 141/302 (46%), Positives = 203/302 (67%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + +N+KV+VQG+TG G HT++ +L TQ+VGG++P+K T VPVF Sbjct: 1 MAIFLTENSKVIVQGMTGSEGMKHTKR-MLASGTQIVGGVNPRKAGTAVDVDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA-RLEK 119 TVAEA + T A+ SV++VPP+ A +E+++AEI L V ITEG+PV D V A L K Sbjct: 60 TVAEAMKETGADVSVVFVPPAFTKAAALEAVDAEIELCVIITEGVPVHDTAEVWAYNLAK 119 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+P +I + G +G++S+SGTLTY+ +++ G S Sbjct: 120 GAKTRIIGPNCPGLITPGKSNAGIIPATITKAGKIGLVSKSGTLTYQMMYELRD--FGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV GT ID L+ F D T +IVM+GEIGG AEE AA ++K+ KP Sbjct: 178 TAVGIGGDPVIGTTHIDCLQAFQDDPDTAAIVMIGEIGGDAEERAAAYIKEHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ G+ + +P+ + + E++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKQEALEAVGVKVGKTPSATAQLMREIMQ 293 Query: 299 SL 300 +L Sbjct: 294 AL 295 >gi|226307915|ref|YP_002767875.1| succinyl-CoA synthetase alpha subunit [Rhodococcus erythropolis PR4] gi|229495132|ref|ZP_04388878.1| succinate-CoA ligase, alpha subunit family [Rhodococcus erythropolis SK121] gi|226187032|dbj|BAH35136.1| succinyl-CoA synthetase alpha subunit [Rhodococcus erythropolis PR4] gi|229318063|gb|EEN83938.1| succinate-CoA ligase, alpha subunit family [Rhodococcus erythropolis SK121] Length = 300 Score = 261 bits (668), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 147/307 (47%), Positives = 201/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 M+I + K++KV+VQG+TG GT HT +L TQVVGG++ +K T + G V Sbjct: 1 MAIFLTKDSKVIVQGITGGEGTKHT-ALMLKAGTQVVGGVNARKAGTTVSHVAADGSPVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV EA + T A+ S+ +VPP+ + DAI+E+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFATVEEAIKETGADVSIAFVPPAFSKDAIVEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 RLEK--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 E +R+IGPNCPGI+TP +GI P +I G +G++S+SGTLTY+ +++ Sbjct: 120 YNESKGKKTRIIGPNCPGIITPGEALVGITPANIAGTGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKQEALEAAGVKVGKTPSATAALA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILQSL 300 >gi|260907285|ref|ZP_05915607.1| succinyl-CoA synthetase subunit alpha [Brevibacterium linens BL2] Length = 298 Score = 261 bits (667), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 147/304 (48%), Positives = 207/304 (68%), Gaps = 14/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++ ++K++VQG+TG GT HT + +L + VVGG++ +K T G V Sbjct: 1 MSIFLNSDSKIIVQGITGGEGTKHTAR-MLAAGSNVVGGVNARKAGTTVKHNDKDGNEVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +V+EA E T A+ SV +VPP+ + DA IE+I+A+I L+V ITEGIPV D V A Sbjct: 60 LPVFGSVSEAMEATGADVSVAFVPPAFSKDAAIEAIDAKIGLLVIITEGIPVQDAAEVWA 119 Query: 116 RLE--KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 R + +++R+IGPNCPGI++P++ GI+P +I +KG +G++S+SGTLTY+ +++ Sbjct: 120 RAQAADNATRIIGPNCPGIISPEASLAGIIPANITKKGKLGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID LE F D TE+IVM+GEIGG AEE AA ++KD Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDALEAFENDPETEAIVMIGEIGGDAEERAAAYIKDNV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P + Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPTETADLM 293 Query: 294 VELL 297 ELL Sbjct: 294 RELL 297 >gi|149279604|ref|ZP_01885733.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [Pedobacter sp. BAL39] gi|149229640|gb|EDM35030.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [Pedobacter sp. BAL39] Length = 290 Score = 261 bits (667), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 156/297 (52%), Positives = 208/297 (70%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG GT+H Q I Y T +VGG+ P KG ++ PVF Sbjct: 1 MSVLVNKDSKVIVQGFTGNEGTYHASQMIEY-GTNLVGGVTPGKGGQT----HLERPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ++ AN S+I+VPP+ A DAI+E+ EA I +IVCITEGIP DM++VK + Sbjct: 56 TVKDAVDKAGANVSIIFVPPAFAADAIMEAAEAGIKVIVCITEGIPTKDMIQVKEYIADK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+T D K+GIMPG IF+KG+VG++S+SGTLTYEAV Q + G+G +TA Sbjct: 116 DCRLIGPNCPGIITADEAKVGIMPGFIFKKGTVGVVSKSGTLTYEAVDQVVKAGMGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE I+M+GEIGG E EAA+++K+ KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETEGIIMIGEIGGGMEAEAARWIKENG----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GR MGHAGA++ G A K+ M E GI + SPA IG ++ ELL Sbjct: 232 GFIAGQTAPAGRRMGHAGAIVGGADDTAAAKMKIMAECGIRVVESPAEIGEAMAELL 288 >gi|295396403|ref|ZP_06806565.1| succinyl-CoA synthetase subunit alpha [Brevibacterium mcbrellneri ATCC 49030] gi|294970705|gb|EFG46618.1| succinyl-CoA synthetase subunit alpha [Brevibacterium mcbrellneri ATCC 49030] Length = 299 Score = 261 bits (667), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 141/306 (46%), Positives = 206/306 (67%), Gaps = 14/306 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++ +KV+VQG+TG GT HT + +L T+VVGG++ +K T + G +V Sbjct: 1 MSIFLNSESKVIVQGITGGEGTKHTAR-MLAAGTKVVGGVNARKAGTKVSHKDKDGNDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV-- 113 +PVF +V EA + T A+ SV +VPP+ + DA E+I+A I L+V ITEGIPV D + Sbjct: 60 LPVFASVEEAMKETGADVSVAFVPPAFSKDAAFEAIDAGIGLLVIITEGIPVQDSAEIWA 119 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 A + + +R+IGPNCPGI++P+ GI+P +I ++G +G++S+SGTLTY+ +++ Sbjct: 120 HATAKGNKTRIIGPNCPGIISPEQSLAGIIPANITKRGKIGLVSKSGTLTYQLMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G ST +GIGGDPV GT ID + F D TE+IVM+GEIGG AEE AA+F+K+ Sbjct: 179 -IGFSTCIGIGGDPVIGTTHIDAIAAFQEDPDTEAIVMIGEIGGDAEERAAEFIKENV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G AE K A++ AG+ + +P+ + Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAEAKKKALEAAGVKVGKTPSETANLM 293 Query: 294 VELLGS 299 E+LG+ Sbjct: 294 REILGA 299 >gi|88855830|ref|ZP_01130493.1| succinyl-CoA synthetase alpha subunit [marine actinobacterium PHSC20C1] gi|88815154|gb|EAR25013.1| succinyl-CoA synthetase alpha subunit [marine actinobacterium PHSC20C1] Length = 295 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 148/302 (49%), Positives = 211/302 (69%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K++KV+VQG+TG GT HT +L TQVVGG++ +K T G+V +PVF Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHT-ALMLAAGTQVVGGVNARKAGTTVLHGDVELPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TVAEA E+T A+ S+ +VPP+ +A++E+I+AEIPL+V ITEG+PV D A ++ Sbjct: 60 TVAEAMEKTGADVSIAFVPPAFTKNAVVEAIDAEIPLLVIITEGVPVGDSAEFWAYAQEK 119 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ LG S Sbjct: 120 GNKTRIIGPNCPGIITPGEALVGITPANITGKGPIGLVSKSGTLTYQMMYELRD--LGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID LE F AD T++IVM+GEIGG AEE AA ++K KP Sbjct: 178 TAIGIGGDPIIGTTHIDALEAFEADPETKAIVMIGEIGGDAEERAADYIKAHV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + + E+L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKQEALEAAGVKVGKTPSEAAKLMREILA 293 Query: 299 SL 300 +L Sbjct: 294 TL 295 >gi|255530598|ref|YP_003090970.1| succinyl-CoA synthetase subunit alpha [Pedobacter heparinus DSM 2366] gi|255343582|gb|ACU02908.1| succinyl-CoA synthetase, alpha subunit [Pedobacter heparinus DSM 2366] Length = 290 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 157/297 (52%), Positives = 208/297 (70%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG GT+H Q I Y T VVGG+ P KG +++ PVF Sbjct: 1 MSVLVNKDSKVIVQGFTGNEGTYHASQMIEY-GTNVVGGVTPGKGGQT----HLDKPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ++ AN S+I+VPP+ A DAI+E+ EA I +IVCITEGIP DM++VK + Sbjct: 56 TVKDAVDKAGANVSIIFVPPAFAADAIMEAAEAGIKVIVCITEGIPTKDMIQVKEYISDR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++T D KIGIMPG IF+KG+VG++S+SGTLTYEAV Q + GLG +TA Sbjct: 116 DCRLIGPNCPGVITADEAKIGIMPGFIFKKGTVGVVSKSGTLTYEAVDQVVKAGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE I+M+GEIGG E EAA+++K KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETEGIIMIGEIGGGMEAEAARWIKANG----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GR MGHAGA++ G + A K+ M E GI + SPA IG ++ LL Sbjct: 232 GFIAGQTAPAGRRMGHAGAIVGGAEDTAAAKMKIMAECGIHVVESPAEIGAAMAALL 288 >gi|224149849|ref|XP_002336874.1| predicted protein [Populus trichocarpa] gi|222837041|gb|EEE75420.1| predicted protein [Populus trichocarpa] Length = 208 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 134/207 (64%), Positives = 158/207 (76%), Gaps = 6/207 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF T Sbjct: 3 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNT 57 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 VAEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMVRVKA L + + Sbjct: 58 VAEAKAETKANASVIYVPPPFAAAAILEAMEAELNLVVCITEGIPQHDMVRVKAALNRQT 117 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMP I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 118 KTRLIGPNCPGIIKPGECKIGIMPAYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATE 207 VGIGGDP GT F+D +E FL D TE Sbjct: 178 VGIGGDPFNGTNFVDCIEKFLVDPQTE 204 >gi|326383704|ref|ZP_08205389.1| succinyl-CoA synthetase subunit alpha [Gordonia neofelifaecis NRRL B-59395] gi|326197468|gb|EGD54657.1| succinyl-CoA synthetase subunit alpha [Gordonia neofelifaecis NRRL B-59395] Length = 300 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 152/307 (49%), Positives = 204/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++KN KV+VQG+TG GT HT +L T VVGG++ +K T + G V Sbjct: 1 MSIYLNKNNKVIVQGITGGEGTKHT-ALMLKAGTNVVGGVNARKAGTTVSHVDADGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E T A+ S+ +VPP+ + DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFASVAEAMESTGADTSIAFVPPAFSKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +EK + +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 YNVEKGAKTRIIGPNCPGIITPGEALVGITPNNITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKLIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALA 293 Query: 294 VELLGSL 300 EL +L Sbjct: 294 RELFDAL 300 >gi|82702209|ref|YP_411775.1| succinyl-CoA synthetase subunit alpha [Nitrosospira multiformis ATCC 25196] gi|82410274|gb|ABB74383.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nitrosospira multiformis ATCC 25196] Length = 295 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 140/304 (46%), Positives = 194/304 (63%), Gaps = 13/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+D+NT+++VQG TGK GTFH + I Y + +VGG+ P KG G PVF Sbjct: 1 MAILIDENTRIIVQGFTGKIGTFHAQDMINYG-SNIVGGVTPGKGGQQHLG----RPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA ++ ANAS+++VPP+ A D+I+E+ +A I V IT+GIP DM+ VK L + Sbjct: 56 TVKEAVQQVGANASIVFVPPAFAADSIMEAADAGIKYCVAITDGIPTQDMMTVKNFLRRF 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L GPNC G ++P +GIMPG I+ G VG++ RSGTL YEA Q G+G Sbjct: 116 PIEERMVLTGPNCAGTISPGRAMLGIMPGHIYMAGDVGVVGRSGTLGYEAADQMRTLGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ D+LE F D T+ +VM+GEIGG E EA F +D Sbjct: 176 ISTSVGIGGDPIIGSSHRDILERFEEDPETKVVVMIGEIGGPQEVEAGIFSRDY----MS 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V ++AG TAP GR MGHAGA+IS A +K+ +KE G+ I+P+P+ IG ++ ++ Sbjct: 232 KPLVAYIAGLTAPEGRRMGHAGAIISAAGESAAEKVAILKELGVTISPTPSAIGETVAKV 291 Query: 297 LGSL 300 L + Sbjct: 292 LAKM 295 >gi|328950884|ref|YP_004368219.1| succinyl-CoA synthetase, alpha subunit [Marinithermus hydrothermalis DSM 14884] gi|328451208|gb|AEB12109.1| succinyl-CoA synthetase, alpha subunit [Marinithermus hydrothermalis DSM 14884] Length = 290 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 151/285 (52%), Positives = 197/285 (69%), Gaps = 9/285 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+T+VLVQG+TG+ G FHTEQ I Y T++V G+ P KG G VPV+ Sbjct: 1 MSILVNKDTRVLVQGITGREGRFHTEQMIQYG-TRIVAGVTPGKGGQEVLG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +AS+I+VP A DA +E+ A IPL+V ITEGIP LDMVR +++ Sbjct: 56 TVREAVAHHEIDASIIFVPAPAAADAALEAARAGIPLVVLITEGIPALDMVRAVKEIKEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIG NCPG+++ + KIGIMPG +F+KG VG++SRSGTLTYEA S GLG +T Sbjct: 116 GVRLIGGNCPGLISAEETKIGIMPGHVFKKGKVGLISRSGTLTYEAAAALSAAGLGITTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F D+L LF D TE++V++GEIGGS EEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIIGTTFKDLLPLFNEDPETEAVVVIGEIGGSDEEEAAAWIKEHM----NKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 GF+ G++AP G+ MGHAGA+I G G E K+ A EAG+ +A + Sbjct: 232 GFIGGRSAPKGKRMGHAGAIIMGDVGTPESKLKAFAEAGVPVADT 276 >gi|312136241|ref|YP_004003578.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methanothermus fervidus DSM 2088] gi|311223960|gb|ADP76816.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methanothermus fervidus DSM 2088] Length = 284 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 133/287 (46%), Positives = 193/287 (67%), Gaps = 11/287 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I++D+N + LVQG+TG+ G+FHT+Q + Y T++V G+ P KG G V V+ ++ Sbjct: 2 IILDENVRCLVQGITGRQGSFHTKQMLEYG-TKIVAGVTPGKGGKKVAG----VDVYNSI 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EAKE NAS+I+VP A DA E+I+ + L+V ITE + D + + + ++ Sbjct: 57 EEAKEHVDVNASIIFVPSQFAKDAAFEAIK-HLDLVVIITEHMVSHDTMEIIEYANRMNT 115 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PGI+TP K+GIMP IFR+G+VGI+SRSGTL YE + ++ G GQST +G Sbjct: 116 IVIGPNTPGIITPGVGKLGIMPHHIFREGNVGIVSRSGTLMYEFASKITEAGFGQSTCLG 175 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGD + G +F+DVL +F D T+ ++++GEIGG AEE AA+++ + KP++ F Sbjct: 176 IGGDLITGLDFVDVLRMFEKDPDTDVVLLIGEIGGDAEERAAKYINKMS-----KPVIAF 230 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +AG TAPPG+ MGHAGA+I GGKG AE KINA+K+AG + P+ + Sbjct: 231 IAGFTAPPGKRMGHAGAIIEGGKGTAESKINALKDAGAYVVKKPSEV 277 >gi|117927590|ref|YP_872141.1| succinyl-CoA synthetase subunit alpha [Acidothermus cellulolyticus 11B] gi|117648053|gb|ABK52155.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Acidothermus cellulolyticus 11B] Length = 295 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 138/299 (46%), Positives = 199/299 (66%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I VD+ ++V+VQG+TG G+ HT Q +L T +VGG +P+K T+ +V +PVF Sbjct: 1 MAIFVDRTSRVIVQGITGSEGSKHT-QRMLRAGTTIVGGTNPRKAGTFVEFDDVKLPVFA 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TVA+A T A+ +V +VPP+GA A++E+I+A IPL+V ITEGIPV D + A + Sbjct: 60 TVADAMAETGADVAVGFVPPAGAKAAMLEAIDAGIPLLVVITEGIPVHDTMYAWAYAARR 119 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPGI +P +GI+P I G +G++S+SGTLTY+ +F+ +G S Sbjct: 120 GHRTRIIGPNCPGITSPGQSNVGIIPADITEPGRIGLVSKSGTLTYQMMFELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID L F D T+ IVM+GEIGG AEE AA ++ + KP Sbjct: 178 TCVGIGGDPIIGTTHIDCLRAFQEDPETDVIVMIGEIGGDAEELAAAYIAEHV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG+VAG TAP G+TMGHAGA+ISG G A+ K A++ G+ + +P++ + + E++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIISGSAGTAQAKKEALERVGVRVGRTPSQTAQLVREIM 292 >gi|294714385|gb|ADF30395.1| CG6255 [Drosophila mauritiana] Length = 229 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 130/227 (57%), Positives = 171/227 (75%), Gaps = 6/227 (2%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 ++K+TK++V G TGK TFH+E++I Y T +VGG++PKKG T G PVF +V E Sbjct: 1 INKSTKLIVHGFTGKQATFHSEESIKY-GTNIVGGVNPKKGGTEHLGK----PVFKSVEE 55 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSR 123 A E+T +A+VI++PP A + I +IE+EI LIV ITEGIP DMVR+ L + SR Sbjct: 56 AVEKTKPDATVIFIPPPSAAEGICAAIESEIGLIVAITEGIPQSDMVRISQMLNCQEKSR 115 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPNCPGI++PD CKIGIMPG I ++G VGI+SRSGTLTYE+V QT+ GLGQ+ VG+ Sbjct: 116 LLGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALCVGL 175 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 GGDP GT FID L++FL+D+ + IVM+GEIGGSAEE+AA FLK++ Sbjct: 176 GGDPFNGTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEDAADFLKEK 222 >gi|120405819|ref|YP_955648.1| succinyl-CoA synthetase subunit alpha [Mycobacterium vanbaalenii PYR-1] gi|119958637|gb|ABM15642.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Mycobacterium vanbaalenii PYR-1] Length = 300 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 149/307 (48%), Positives = 206/307 (67%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++K++KV+VQG+TG GT HT + +L TQ+VGG++ +K T G V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHT-KLMLKAGTQIVGGVNARKAGTTVKHEDKDGNEVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA + T A+ S+ +VPP+ + DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFASVAEAMKETGADVSIAFVPPAFSKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 ++K +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 YNVDKGQKTRIIGPNCPGIITPGESLVGITPNNITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKIIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ + Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAKLA 293 Query: 294 VELLGSL 300 E+L L Sbjct: 294 REILAGL 300 >gi|323650192|gb|ADX97182.1| mitochondrial succinate-CoA ligase GDP-forming alpha subunit [Perca flavescens] Length = 271 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 149/250 (59%), Positives = 188/250 (75%), Gaps = 6/250 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + K+TKV+ QG TGK GTFH++Q++ Y +Q+VGG+ P KG G +PVF + Sbjct: 27 NLYITKSTKVICQGFTGKQGTFHSQQSLDY-GSQLVGGVSPGKGGKTHLG----LPVFNS 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE T A+A+VIYVPP A AIIE+I+AEIPL+VCITEGIP DMVRVK +L + Sbjct: 82 VKEAKEGTGADATVIYVPPPFAAAAIIEAIDAEIPLVVCITEGIPQQDMVRVKHKLLRQG 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 142 TTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D TE I+++GEIGG+AEE AA++LK KP+V Sbjct: 202 IGIGGDPFNGTNFIDCLEVFLQDPKTEGIILIGEIGGNAEENAAEYLKQHNSGANSKPVV 261 Query: 241 GFVAGKTAPP 250 F+AG TAPP Sbjct: 262 SFIAGLTAPP 271 >gi|297201854|ref|ZP_06919251.1| succinyl-CoA synthetase subunit alpha [Streptomyces sviceus ATCC 29083] gi|297147986|gb|EFH28821.1| succinyl-CoA synthetase subunit alpha [Streptomyces sviceus ATCC 29083] Length = 294 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 145/299 (48%), Positives = 200/299 (66%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +DK++KV+VQG+TG G HT + +L T +VGG++P+K T +PVF Sbjct: 1 MAIFLDKDSKVIVQGMTGATGMKHT-KLMLADGTNIVGGVNPRKAGTSVDIDGTEIPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TVAEA E+T AN SV++VPP+ A A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 TVAEAIEKTGANVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFYAYAVSQ 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA F+K+ KP Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAAAFIKENV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P + E+L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPTETAKLAREIL 292 >gi|307595218|ref|YP_003901535.1| succinyl-CoA synthetase subunit alpha [Vulcanisaeta distributa DSM 14429] gi|307550419|gb|ADN50484.1| succinyl-CoA synthetase, alpha subunit [Vulcanisaeta distributa DSM 14429] Length = 294 Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 137/292 (46%), Positives = 198/292 (67%), Gaps = 12/292 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV++NTKVLVQG+TG+ G+ HT+ + Y T+VV G+ P KG G VPVF Sbjct: 3 MAILVNENTKVLVQGITGREGSRHTQYMLQYG-TKVVAGVTPGKGGQTVHG----VPVFD 57 Query: 61 TVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EA ++ N S+I+VP A D++ E+I+A I LIV ITE IP+ D +R ++ Sbjct: 58 TVEEALRKFPDINTSIIFVPAQFAADSVYEAIDAGIKLIVIITEHIPIHDALRFVNYAKR 117 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRK-GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPG+++P K+GI+P I+ K G VGI+SRSGTLTYE + +Q G+GQS Sbjct: 118 KGVTIIGPNCPGVVSPLRSKVGILPNHIYTKSGPVGIVSRSGTLTYEISYHLTQAGIGQS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KK 237 T VGIGGDP+ GT+ ++V+++F D T+ IV++GEIGG+ EE AQ++ G+ K Sbjct: 178 TVVGIGGDPIIGTDMLEVVKMFEEDPETKYIVVIGEIGGTMEERLAQYIGS----GKVTK 233 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 P+V +++G+TAPPG+ MGHAGA++S G G E K+ A +E + +A +P + Sbjct: 234 PVVAYISGRTAPPGKRMGHAGAIVSMGMGSYESKVKAFQEVNVPVAKTPTEV 285 >gi|256829615|ref|YP_003158343.1| succinyl-CoA synthetase subunit alpha [Desulfomicrobium baculatum DSM 4028] gi|256578791|gb|ACU89927.1| succinyl-CoA synthetase, alpha subunit [Desulfomicrobium baculatum DSM 4028] Length = 689 Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 137/291 (47%), Positives = 191/291 (65%), Gaps = 8/291 (2%) Query: 7 KNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 +N ++LVQGLTGK G H Y VV G+ P KG + G VPVF TV EA Sbjct: 407 ENCRILVQGLTGKQGQLHCRLMQEY-GANVVAGVTPGKGGSEVLG----VPVFDTVREAA 461 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + +AS+I+VP + A DA++E+ A I +VCIT+GIP LDM+R RL+ S +R+IG Sbjct: 462 KAMPIDASIIFVPGAMAPDAVLEAAAAGIGWVVCITDGIPQLDMLRALERLKDSPTRVIG 521 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNCPG++ P KIGIMPG IF G V + SRSGTLTYE V + ++ G+GQS VGIGGD Sbjct: 522 PNCPGLVMPGKTKIGIMPGDIFTPGPVAVFSRSGTLTYECVDRLTKAGIGQSVCVGIGGD 581 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P GT F D+ +L D T+++V++GEIGG AEEE Q++++ G + P+ GF+AG+ Sbjct: 582 PFVGTSFTDLCKLVRHDPDTKAVVILGEIGGKAEEELGQYMQES---GFELPVFGFIAGR 638 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 TAPPG+ +GHAGA++ G GG E K+ AM ++G + +I ++ ++L Sbjct: 639 TAPPGKRLGHAGAILEKGAGGIEVKLQAMADSGFHLIDDLDQIAGAVAQVL 689 >gi|126465379|ref|YP_001040488.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Staphylothermus marinus F1] gi|126014202|gb|ABN69580.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Staphylothermus marinus F1] Length = 293 Score = 259 bits (661), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 141/301 (46%), Positives = 197/301 (65%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M +LV+KNT+VLVQG+TG+ G+FHT+ + Y T++V G+ P KG G VPV+ Sbjct: 1 MGVLVNKNTRVLVQGITGREGSFHTKLMLEYG-TKIVAGVTPGKGGMNVYG----VPVYD 55 Query: 61 TVAEAKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 T+ EA E +AS+I+VP A DA+ E+I+A+I IV ITEGIPV + + +K Sbjct: 56 TIYEAVENIGEIDASIIFVPAKFASDAVFEAIDADIKTIVVITEGIPVHEELEFVRYAKK 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +IGPN PGI+ P KIGIMP +F+ G++G++SRSGTLTYE + ++G G ST Sbjct: 116 KNITIIGPNTPGIMVPGETKIGIMPAHVFKPGNIGLISRSGTLTYEIAREIGKKGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +G+GGDPV G FI+ +LF D T+++V++GEIGG AEE +F K A+ KKP+ Sbjct: 176 VIGLGGDPVTGLNFIEAYDLFAKDPITKAVVLIGEIGGDAEE---RFAKYYAELPVKKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V ++AGKTAPPG+ MGHAGA+IS G G K A+ +A I +A P+ I L +L Sbjct: 233 VAYIAGKTAPPGKRMGHAGAIISMGMGDYRSKKQALLKANIPVAEKPSDIPILLSSVLEK 292 Query: 300 L 300 L Sbjct: 293 L 293 >gi|56696453|ref|YP_166810.1| succinyl-CoA synthetase subunit alpha [Ruegeria pomeroyi DSS-3] gi|56678190|gb|AAV94856.1| malate--CoA ligase, alpha subunit [Ruegeria pomeroyi DSS-3] Length = 296 Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 142/301 (47%), Positives = 188/301 (62%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +D+ T V+VQG+TGK FHT I Y V G + K G T VPVF Sbjct: 1 MSIFIDRETPVIVQGITGKMARFHTADMIAYGTNVVGGVVPGKGGQTVE-----GVPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ERT A AS+++VPP A D+I+E+ +A I VCIT+GIP DM+RVK + + Sbjct: 56 TVEEAVERTGAEASLVFVPPPFAADSIMEAADAGIRYCVCITDGIPAQDMIRVKRYMYRY 115 Query: 121 SSR----LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L GPNC G ++P +GIMPG I+ G VGI+ RSGTL YEA Q + G+G Sbjct: 116 PRERRMVLTGPNCAGTISPGKALLGIMPGHIYLPGPVGIIGRSGTLGYEAAAQLKEHGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+L F D+ T I M+GEIGG E EAA +++D Sbjct: 176 VSTSVGIGGDPINGSSFKDILHRFEQDDETHVICMIGEIGGPQEAEAAAYIRDHV----S 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ +VAG TAP GRTMGHAGA+IS A +K+ + AG+ +AP+PA IG ++ + Sbjct: 232 KPVIAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILTAAGVTVAPNPAVIGDTIARV 291 Query: 297 L 297 + Sbjct: 292 M 292 >gi|20094169|ref|NP_614016.1| succinyl-CoA synthetase alpha subunit [Methanopyrus kandleri AV19] gi|19887185|gb|AAM01946.1| Succinyl-CoA synthetase alpha subunit [Methanopyrus kandleri AV19] Length = 287 Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 141/295 (47%), Positives = 194/295 (65%), Gaps = 9/295 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 ++D +T+VLVQG+TG+ G+FHT+ + Y T++V G+ P +G G VPV+ TV Sbjct: 1 MLDSDTRVLVQGITGRHGSFHTKLMLEYG-TEIVAGVTPGRGGQEVHG----VPVYDTVE 55 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 EA E T A ASVI+VP A DA++E+IEA + IV ITE IP D +R R Sbjct: 56 EAVEETDAEASVIFVPAPQAPDAVMEAIEAGLDPIVVITEHIPAHDTMRFVELARWEGIR 115 Query: 124 LIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PGI+ P + K+GIMP +F +G V + SRSGTLTYE V ++ GLGQS VG Sbjct: 116 IIGPNTPGIIVPPERVKLGIMPHQVFTEGEVAVASRSGTLTYEIVQAMTEAGLGQSLCVG 175 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GGD + GT FID LE D+ TE++V++GEIGG+AEE AA+++ A+ KP+V + Sbjct: 176 LGGDQIVGTTFIDFLEYVREDDRTEAVVLIGEIGGNAEELAAEYI---AETDFPKPVVAY 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG+ APPG+ MGHAGA+I G+G AE KI A ++AG+ +A P + L E L Sbjct: 233 IAGRHAPPGKRMGHAGAIIERGRGTAESKIEAFRKAGVDVAEKPWEVPELLREYL 287 >gi|290958039|ref|YP_003489221.1| succinyl-CoA synthetase subunit alpha [Streptomyces scabiei 87.22] gi|260647565|emb|CBG70670.1| succinyl-CoA synthetase alpha chain [Streptomyces scabiei 87.22] Length = 294 Score = 258 bits (660), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 145/300 (48%), Positives = 200/300 (66%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++K +KV+VQG+TG G HT + +L T +VGG++P+K T +PVF Sbjct: 1 MAIFLNKESKVIVQGMTGATGMKHT-KLMLADGTNIVGGVNPRKAGTTVDVDGTEIPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TVAEA E+T AN SV++VPP+ A A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 TVAEAIEKTGANVSVLFVPPAFAKSAVVEAIDAEIPLAVVITEGIAVHDSAAFYAYAGSK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA ++K KKP Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAADYIKANV----KKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P + E+LG Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPTETAKLAREILG 293 >gi|50955503|ref|YP_062791.1| succinyl-CoA synthetase subunit alpha [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951985|gb|AAT89686.1| succinyl-CoA synthetase, alpha chain [Leifsonia xyli subsp. xyli str. CTCB07] Length = 295 Score = 258 bits (660), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 149/302 (49%), Positives = 208/302 (68%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K++KV+VQG+TG GT HT +L T VVGG++ +K T T G+V +PVF Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHT-ALMLKAGTTVVGGVNARKAGTSVTHGDVELPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E+T A+ S+++VPP+ A DA++E+I+AEIPL+V ITEGIPV D V A ++ Sbjct: 60 TVVEAIEKTGADVSIVFVPPAFAKDAMVEAIDAEIPLLVVITEGIPVQDAAEVWAYAKEK 119 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++ P +GI P +I KG +G++S+SGTLTY+ +++ LG S Sbjct: 120 GNKTRIIGPNCPGVIIPGESLVGITPATITGKGPIGLVSKSGTLTYQMMYELRD--LGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L F AD T +IVM+GEIGG AEE AA F+K KP Sbjct: 178 TAIGIGGDPIIGTTHIDALAAFEADPETRAIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ L E+ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETASLLREVYA 293 Query: 299 SL 300 +L Sbjct: 294 AL 295 >gi|114769505|ref|ZP_01447131.1| succinyl-CoA synthetase alpha subunit [alpha proteobacterium HTCC2255] gi|114550422|gb|EAU53303.1| succinyl-CoA synthetase alpha subunit [alpha proteobacterium HTCC2255] Length = 292 Score = 258 bits (660), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 140/301 (46%), Positives = 192/301 (63%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +D+ TKV+VQG+TG+ FHT++ I Y T VV G+ P K G VPVF Sbjct: 1 MSIFIDEKTKVIVQGITGRMAKFHTKEMIEYG-TNVVAGVTPGKSGQIVEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A AS+++VPP A D+I+E+ +A I V IT+GIP DM+RVK +++ Sbjct: 56 TVKDAVAATGAEASLVFVPPPFAADSIMEAADAGIKYCVSITDGIPAQDMMRVKRYMKRY 115 Query: 121 SSR----LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L GPNC G ++P +GIMP I++KG VGI+ RSGTL YEA Q + +G Sbjct: 116 RQENRMVLTGPNCAGTISPGKSFLGIMPPHIYKKGPVGIVGRSGTLGYEAASQLASLDIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+LELF D T+ I ++GEIGG E EAA++++D Sbjct: 176 VSTSVGIGGDPINGSSFRDILELFENDPETKIIALIGEIGGPQEAEAAEYIRDH----MS 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V +VAG TAP GRTMGHAGA+IS A +K+ + AG+ +A P+ IG ++ L Sbjct: 232 KPVVAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILSAAGVTVAQHPSVIGETIANL 291 Query: 297 L 297 + Sbjct: 292 M 292 >gi|330982527|gb|EGH80630.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 226 Score = 258 bits (659), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 133/226 (58%), Positives = 166/226 (73%), Gaps = 4/226 (1%) Query: 73 ASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGI 132 ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ LIGPNCPG+ Sbjct: 1 ASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDELGVVLIGPNCPGV 60 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 +TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST VGIGGDP+ G+ Sbjct: 61 ITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTCVGIGGDPIPGSN 120 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V ++AG TAPPG+ Sbjct: 121 FIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVVSYIAGVTAPPGK 176 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 177 RMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 222 >gi|323343454|ref|ZP_08083681.1| succinyl-CoA synthetase subunit alpha [Prevotella oralis ATCC 33269] gi|323095273|gb|EFZ37847.1| succinyl-CoA synthetase subunit alpha [Prevotella oralis ATCC 33269] Length = 293 Score = 258 bits (659), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 143/289 (49%), Positives = 196/289 (67%), Gaps = 9/289 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TK++VQG+TG+ G+FH + Y T VVGG P K G +PVF Sbjct: 1 MSILINKDTKLIVQGITGRDGSFHASKMKSYG-TNVVGGTSPGKAGQTVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A+ SVI+VP A DA++E+ + I LIVCITEG+P +D V + + Sbjct: 56 TVKDAVAATGADTSVIFVPAPFAKDAMMEAADGGIKLIVCITEGVPTMDAVIAQRYIRMK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG+++P+ +GIMP +IF+KG G++SRSGTLTYE V+ + GLGQSTA Sbjct: 116 GARLIGPNCPGLISPEESMVGIMPTNIFKKGHTGVISRSGTLTYEVVYNLTVNGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDPV G F D+LE+F D T+SI ++GEIGG AEE AA+++K KP+ Sbjct: 176 VGVGGDPVVGLYFQDLLEMFEKDPQTDSIALIGEIGGDAEERAAEYIKAHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 F++G+ APPG+ MGHAGA+IS G G A +KI A + AG+ +A + I Sbjct: 232 VFISGRQAPPGKQMGHAGAIISSGSGTASEKIAAFEAAGVPVANETSEI 280 >gi|254581882|ref|XP_002496926.1| ZYRO0D11352p [Zygosaccharomyces rouxii] gi|238939818|emb|CAR27993.1| ZYRO0D11352p [Zygosaccharomyces rouxii] Length = 325 Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 144/304 (47%), Positives = 195/304 (64%), Gaps = 10/304 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++++ K +KV++QG TGK TFH + + Y T +VGG +PKK G PVF Sbjct: 26 NLILPKESKVIIQGFTGKQATFHAKISQEYG-TNIVGGTNPKKAGQTHLGQ----PVFAN 80 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A T A A+ I+VPP A AI E+IEAEIPL V ITEGIP DM+ V L+ + Sbjct: 81 VRDAVRETGATATGIFVPPPIAAGAIREAIEAEIPLAVAITEGIPQHDMLYVSEMLKSQD 140 Query: 121 SSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI+ P S +IGI P IF+ G +GI+S+SGTLTYEAV QT+ GLGQ+ Sbjct: 141 KTRLVGPNCPGIINPRSNVRIGIQPTRIFKPGKIGIISKSGTLTYEAVQQTTLAGLGQTL 200 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKP 238 +G+GGD GT+FID L+LFL D+ TE I+M+GEIGG AE EAA+FLK+ R P Sbjct: 201 VIGMGGDAFPGTDFIDTLKLFLEDKETEGIIMLGEIGGKAEIEAAEFLKEYNFNRPNPLP 260 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG A G MGH+GA++ G AE K A++ G+ + SP +G++L++ Sbjct: 261 VASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKKALRSVGVNVVESPGHLGKALLDE 320 Query: 297 LGSL 300 L Sbjct: 321 FAKL 324 >gi|126437271|ref|YP_001072962.1| succinyl-CoA synthetase subunit alpha [Mycobacterium sp. JLS] gi|126237071|gb|ABO00472.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Mycobacterium sp. JLS] Length = 300 Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 150/304 (49%), Positives = 203/304 (66%), Gaps = 14/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQ+VGG++ +K T + G +V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHT-ALMLKAGTQLVGGVNARKAGTTVSHVDKDGKDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +V EA + T A+ SV++VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVGEAMKETGADVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +EK +R+IGPNCPGI+TP GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 YNVEKGQKTRIIGPNCPGIITPGEALAGITPANITGSGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++KD Sbjct: 179 -FGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKDNV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ + Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAQLA 293 Query: 294 VELL 297 E+L Sbjct: 294 REIL 297 >gi|261878943|ref|ZP_06005370.1| succinyl-CoA synthetase subunit alpha [Prevotella bergensis DSM 17361] gi|270334453|gb|EFA45239.1| succinyl-CoA synthetase subunit alpha [Prevotella bergensis DSM 17361] Length = 289 Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 144/298 (48%), Positives = 199/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+VQG+TG+ G+FH + Y T VVGG P K G +PVF Sbjct: 1 MSILINKDTKVIVQGITGRDGSFHASKMKEYG-THVVGGTSPGKAGQEVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T AN S+I+VP + A DA++E+I+ I L+VCITEG+P LD V V+ Sbjct: 56 TVKDAVAATGANTSIIFVPAAFAKDAMLEAIDGGIQLLVCITEGVPTLDAVAVQRYARVK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPG+++P+ +GIMP ++F+KG G++SRSGTLTYE V + G+G STA Sbjct: 116 GVQVIGPNCPGLISPEESMVGIMPANVFKKGHTGVISRSGTLTYEVVANLAAAGMGVSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDPV G F D+L++F D T+SI ++GEIGG AEE AAQF+K KP+ Sbjct: 176 VGVGGDPVVGLYFEDLLQMFQDDPDTDSIALIGEIGGDAEERAAQFIKANV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F++G+ APPG+ MGHAGA+ISGG G A K+ A + G+ +A + I L ++LG Sbjct: 232 AFISGRQAPPGKQMGHAGAIISGGAGTAAGKVAAFEAVGVPVAKETSEIPELLKKMLG 289 >gi|118469852|ref|YP_889761.1| succinyl-CoA synthetase subunit alpha [Mycobacterium smegmatis str. MC2 155] gi|118171139|gb|ABK72035.1| succinyl-CoA synthetase, alpha subunit [Mycobacterium smegmatis str. MC2 155] Length = 300 Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 148/307 (48%), Positives = 207/307 (67%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQ+VGG++ +K T + G ++ Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHT-ALMLKAGTQIVGGVNARKAGTTVSHKDKDGNDIE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA + T A+ S+ +VPP+ + DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAIKETGADVSIAFVPPAFSKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 ++K +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 YNVDKGQKTRIIGPNCPGIITPGEALVGITPNNITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ + Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAKLA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILQSL 300 >gi|126642750|ref|YP_001085734.1| succinyl-CoA synthetase alpha chain [Acinetobacter baumannii ATCC 17978] Length = 240 Score = 258 bits (658), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 128/236 (54%), Positives = 177/236 (75%), Gaps = 6/236 (2%) Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS-- 121 EA T A+ASVIYVP D+I+E++++ + LIV ITEG+P +DM++ K LE + Sbjct: 3 EAVRETNADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTIDMLKAKRYLETNGNG 62 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQST + Sbjct: 63 TRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQSTCI 122 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G I+ L+LF D T++I+M+GEIGG+AEEEAA+F+K KP+VG Sbjct: 123 GIGGDPIPGMNQIEALQLFQDDPDTDAIIMIGEIGGTAEEEAAEFIKSNV----TKPVVG 178 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGG+G AE+K A ++AG+ SPA +G +++++L Sbjct: 179 YIAGVTAPKGKRMGHAGAIISGGQGTAEEKFAAFEKAGMAYTRSPAELGSTMLQVL 234 >gi|145596324|ref|YP_001160621.1| succinyl-CoA synthetase subunit alpha [Salinispora tropica CNB-440] gi|145305661|gb|ABP56243.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Salinispora tropica CNB-440] Length = 295 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 138/299 (46%), Positives = 195/299 (65%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G+ HT + +L T +VGG++P+K T +PVF Sbjct: 1 MAIWLTKDSKVIVQGMTGSEGSKHTRR-MLAAGTDIVGGVNPRKAGTTVDFDGAELPVFA 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 +VA+A T AN +VI+VPP A+IE+I+A I L V ITEG+PV D A + Sbjct: 60 SVADAMRETGANVTVIFVPPQFTKGAVIEAIDAGISLAVVITEGVPVHDTAAFWAYNVAQ 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPGI++P + GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GERTRIIGPNCPGIVSPGASNAGIIPADITGAGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID L F D T++IVM+GEIGG AEE AA+F+K KP Sbjct: 178 TCVGIGGDPIIGTTHIDALAAFEDDPDTDAIVMIGEIGGDAEERAAEFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAPPG+TMGHAGA+ISG G AE K A++ AG+ + +P R + E++ Sbjct: 234 VVGYIAGFTAPPGKTMGHAGAIISGSAGTAEAKKTALEAAGVKVGKTPTETARLMREIM 292 >gi|330470053|ref|YP_004407796.1| succinyl-CoA synthetase subunit alpha [Verrucosispora maris AB-18-032] gi|328813024|gb|AEB47196.1| succinyl-CoA synthetase subunit alpha [Verrucosispora maris AB-18-032] Length = 295 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 138/299 (46%), Positives = 196/299 (65%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KV+VQG+TG G+ HT + +L T VVGG++P+K T +PVF Sbjct: 1 MAIWLTKESKVIVQGMTGSEGSKHTRR-MLAAGTNVVGGVNPRKAGTTVDFDGAELPVFA 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 +V++A + T A+ +VI+VPP A+IE+I+AEIPL V ITEG+PV D A + Sbjct: 60 SVSDAMKETGADVTVIFVPPQFTKGAVIEAIDAEIPLAVVITEGVPVHDTAAFWAYNVAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPGI +P + GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GERTRIIGPNCPGIASPGASNAGIIPADITGAGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID L F AD T++IVM+GEIGG AEE AA+F+K KP Sbjct: 178 TCVGIGGDPIIGTTHIDALAAFEADPDTDAIVMIGEIGGDAEERAAEFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAPPG+TMGHAGA+ISG G A+ K A++ G+ + +P + + EL+ Sbjct: 234 VVGYIAGFTAPPGKTMGHAGAIISGSAGTADAKKAALEAVGVKVGKTPTETAKLMRELM 292 >gi|317508745|ref|ZP_07966397.1| succinate-CoA ligase [Segniliparus rugosus ATCC BAA-974] gi|316252960|gb|EFV12378.1| succinate-CoA ligase [Segniliparus rugosus ATCC BAA-974] Length = 301 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 150/304 (49%), Positives = 203/304 (66%), Gaps = 14/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQVVGG++ KK T G +V Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHT-ALMLKAGTQVVGGVNAKKAGTTVAHKGKDGNDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TVAEA E+T A+ S+ +VPP+ A+IE+IEAEIPL+V ITEG+PV D V A Sbjct: 60 LPVFGTVAEAIEKTGADVSIAFVPPAFTKSAMIEAIEAEIPLLVVITEGVPVHDTVAAFA 119 Query: 116 --RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + + S +R+IGPNCPGI+TP +GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 HNKAKGSKTRVIGPNCPGIITPGESLVGITPANIAGSGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID ++ F D ATE IVM+GEIGG AEE AA ++K+ Sbjct: 179 -FGFSTAIGIGGDPVIGTSHIDAIKAFQEDPATELIVMIGEIGGDAEERAAAYIKENV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+V +VAG TAP G+TMGHAGA++SG G AE K A++ G+ + +P+ Sbjct: 236 --TKPVVAYVAGFTAPEGKTMGHAGAIVSGSAGTAEAKKAALEAVGVKVGKTPSGTAALA 293 Query: 294 VELL 297 E+L Sbjct: 294 REIL 297 >gi|239929388|ref|ZP_04686341.1| succinyl-CoA synthetase subunit alpha [Streptomyces ghanaensis ATCC 14672] gi|291437714|ref|ZP_06577104.1| succinyl-CoA synthetase alpha chain [Streptomyces ghanaensis ATCC 14672] gi|291340609|gb|EFE67565.1| succinyl-CoA synthetase alpha chain [Streptomyces ghanaensis ATCC 14672] Length = 294 Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 141/300 (47%), Positives = 194/300 (64%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KV+VQG+TG G HT + +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKESKVIVQGMTGSEGQKHTRR-MLASGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E+T A+ +VI+VP DA+IE+I+AEIPL V ITEGI V D A K Sbjct: 60 TVKEAIEKTGADVTVIFVPEKFTKDAVIEAIDAEIPLAVVITEGIAVHDTASFWAYAGKK 119 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPADITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA F+K+ KP Sbjct: 178 TCVGIGGDPIIGTTHIDALKAFQDDPDTDLIVMIGEIGGDAEERAAAFIKENV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P + +LG Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAKLARAVLG 293 >gi|15678591|ref|NP_275706.1| succinyl-CoA synthetase subunit alpha [Methanothermobacter thermautotrophicus str. Delta H] gi|6647834|sp|O26663|SUCD_METTH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|2621640|gb|AAB85069.1| succinyl-CoA synthetase, alpha subunit [Methanothermobacter thermautotrophicus str. Delta H] Length = 293 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 140/296 (47%), Positives = 190/296 (64%), Gaps = 11/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D++T+ LVQG+TGK G+FHT Q + Y T++V G+ P KG + G V V+ +V Sbjct: 7 ILLDEDTRCLVQGITGKQGSFHTRQMLEYG-TRIVAGVTPGKGGQEFLG----VDVYNSV 61 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E E NAS+I+VP A DA ESI+ + L+V ITE IPV D +++ + Sbjct: 62 EEVTEEMDVNASIIFVPAPFAKDAAFESIK-HLDLVVIITEHIPVHDSMQIMEYASRMGK 120 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PGI+TP K+GIMP IF +G++GI+SRSGTLTYE Q ++ G GQST VG Sbjct: 121 TVIGPNTPGIITPGIGKLGIMPTHIFTEGTIGIVSRSGTLTYEFAAQLTEAGFGQSTCVG 180 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV G F+DVLE F D T+++V++GEIGG AEE AA +++ KP+ F Sbjct: 181 IGGDPVTGLGFVDVLERFEDDPGTDAVVLIGEIGGDAEERAASYIEQ-----MSKPVFAF 235 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++G TAPPG+ MGHAGA+I GG G A K A++ AG + P+ I + LG Sbjct: 236 ISGATAPPGKRMGHAGAIIEGGTGTASSKREALEAAGAVVVDRPSAIVDEIRAQLG 291 >gi|302553655|ref|ZP_07305997.1| succinyl-CoA synthetase subunit alpha [Streptomyces viridochromogenes DSM 40736] gi|302471273|gb|EFL34366.1| succinyl-CoA synthetase subunit alpha [Streptomyces viridochromogenes DSM 40736] Length = 294 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 139/299 (46%), Positives = 195/299 (65%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KV+VQG+TG G HT++ +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKESKVIVQGMTGSEGQKHTKR-MLASGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 +V EA E+T A+ SVI+VP DA++E+I+AEIPL V ITEGI V D A K Sbjct: 60 SVKEAIEKTGADVSVIFVPEKFTKDAVVEAIDAEIPLAVVITEGIAVHDTASFWAYAGKK 119 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R++GPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIVGPNCPGLITPGQSNAGIIPADITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA F+K+ KP Sbjct: 178 TCVGIGGDPIIGTTHIDALKAFQDDPDTDLIVMIGEIGGDAEERAAAFIKENV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P + E+L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAKLAREIL 292 >gi|297571845|ref|YP_003697619.1| succinyl-CoA synthetase, subunit alpha [Arcanobacterium haemolyticum DSM 20595] gi|296932192|gb|ADH93000.1| succinyl-CoA synthetase, alpha subunit [Arcanobacterium haemolyticum DSM 20595] Length = 306 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 142/312 (45%), Positives = 200/312 (64%), Gaps = 24/312 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK--------------GS 46 MSI ++K++KV+VQG+TG G HT + +L T +V G +P+K G+ Sbjct: 1 MSIFLNKDSKVIVQGMTGSEGQKHTRR-MLGAGTTIVAGTNPRKAGTSVEFDVEPIGIGA 59 Query: 47 TYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G V++PV+ TVAEAKE T AN SVI+VPP+ A+IE+++A + L+V ITEG+P Sbjct: 60 EERQAGTVSIPVYGTVAEAKEATGANVSVIFVPPAFTKAAVIEAVDAGLELVVVITEGVP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D ++ RLIGPNCPGI+TP +GI P I G +G++S+SGTLTY+ Sbjct: 120 VKDSAEFFTYAQERGVRLIGPNCPGIITPGQSNVGITPPDITGSGRIGLVSKSGTLTYQM 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ S +G +T +GIGGDPV GT ID L+ F AD TE IVM+GEIGG AEE AA F Sbjct: 180 MYELSD--IGFTTCIGIGGDPVSGTTHIDALKAFEADPETELIVMIGEIGGDAEERAAAF 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +K+ KP+VG+VAG TAP G+TMGHAGA++SG G A K +A++ G+ + +P Sbjct: 238 IKEYV----TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAAAKKDALEAVGVKVGKTP 293 Query: 287 ---ARIGRSLVE 295 A + R+++ Sbjct: 294 TEAANLARAILN 305 >gi|150401203|ref|YP_001324969.1| succinyl-CoA synthetase subunit alpha [Methanococcus aeolicus Nankai-3] gi|150013906|gb|ABR56357.1| succinyl-CoA synthetase, alpha subunit [Methanococcus aeolicus Nankai-3] Length = 286 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 130/295 (44%), Positives = 200/295 (67%), Gaps = 10/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NTK +VQG+TGK G+FHT+ ++ C T +V G+ P KG +P++ TV Sbjct: 2 ILLDENTKAVVQGITGKQGSFHTKN-MVECGTNIVAGVTPGKGGMEL----YEIPIYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA ++ ANAS+I+VP DA E+I+A I L++ ITE +PV D + + + + ++ Sbjct: 57 LEAVKKHDANASIIFVPAPFVKDAAYEAIDAGIKLVIIITEHVPVNDAIDIISYAKSNNV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PG+ +P K+GI+P ++ ++G +G++SRSGTLTYE + S G GQS+ +G Sbjct: 117 HVIGPNTPGMASPKVGKLGIIPMNVIKEGKIGMVSRSGTLTYEIANELSNNGFGQSSCIG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV G +I++LE+F D T+++VM+GEIGGS EE AA+++K KKP++ + Sbjct: 177 IGGDPVIGLSYIEILEMFENDPDTDAVVMIGEIGGSNEEIAAEYVKT-----MKKPVIAY 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG+TAP G+TMGHAGA+I G G AE K+ +++AG + + + I + L E+L Sbjct: 232 IAGQTAPEGKTMGHAGAIIEKGVGTAESKMKTLEQAGAFVVRTISEIPKVLKEVL 286 >gi|227536034|ref|ZP_03966083.1| succinate--CoA ligase [Sphingobacterium spiritivorum ATCC 33300] gi|300772006|ref|ZP_07081876.1| succinate--CoA ligase (ADP-forming) [Sphingobacterium spiritivorum ATCC 33861] gi|227243931|gb|EEI93946.1| succinate--CoA ligase [Sphingobacterium spiritivorum ATCC 33300] gi|300760309|gb|EFK57135.1| succinate--CoA ligase (ADP-forming) [Sphingobacterium spiritivorum ATCC 33861] Length = 290 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 162/297 (54%), Positives = 214/297 (72%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG GT+H Q I Y T VVGG+ P KG +++ PVF Sbjct: 1 MSVLVNKDSKVIVQGFTGTEGTYHATQMIEY-GTNVVGGVTPGKGGQQ----HLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ++T AN S+I+VPP+ A DAI+E+ A I +IVCITEGIP DM++VK+ L Sbjct: 56 TVQDAVDKTGANVSIIFVPPAFAADAIMEAAAAGIEVIVCITEGIPTKDMIQVKSYLSDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPGI+T D KIGIMPG IF+KG+VGI+S+SGTLTYEAV QT + GLG +TA Sbjct: 116 NSRLIGPNCPGIITADEAKIGIMPGFIFKKGNVGIVSKSGTLTYEAVDQTVKAGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D T+ I+M+GEIGG E EAA+++K+ KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETKGIIMIGEIGGGMEAEAARWIKEHG----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++ G A K+ M E GI + SPA IG+++ E L Sbjct: 232 GFIAGQTAPPGRRMGHAGAIVGGADDTAAAKMKIMAECGIRVVESPAEIGKAIAEEL 288 >gi|108801290|ref|YP_641487.1| succinyl-CoA synthetase subunit alpha [Mycobacterium sp. MCS] gi|119870441|ref|YP_940393.1| succinyl-CoA synthetase subunit alpha [Mycobacterium sp. KMS] gi|108771709|gb|ABG10431.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Mycobacterium sp. MCS] gi|119696530|gb|ABL93603.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Mycobacterium sp. KMS] Length = 300 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 149/304 (49%), Positives = 203/304 (66%), Gaps = 14/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQ+VGG++ +K T + G +V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHT-ALMLKAGTQLVGGVNARKAGTTVSHVDKDGKDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +V +A + T A+ SV++VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVGDAMKETGADVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +EK +R+IGPNCPGI+TP GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 YNVEKGQKTRIIGPNCPGIITPGEALAGITPANITGSGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++KD Sbjct: 179 -FGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKVIVMIGEIGGDAEERAADYIKDNV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ + Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAQLA 293 Query: 294 VELL 297 E+L Sbjct: 294 REIL 297 >gi|297156121|gb|ADI05833.1| succinyl-CoA synthetase subunit alpha [Streptomyces bingchenggensis BCW-1] Length = 304 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 137/297 (46%), Positives = 192/297 (64%), Gaps = 7/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT + +L T +VGG++P+K VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGAEGMKHTRR-MLAAGTDIVGGVNPRKAGVQIDIDGRTVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA + T A+ +V++VPP A A+IE+ +AEIPL V ITEGIPV D V A Sbjct: 60 SVGEAVDATGADVTVLFVPPPFAKAAVIEAADAEIPLAVVITEGIPVHDAVAFHAYARAR 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++R+IGPNCPG+++P GI+P I + G +G++S+SGTLTY+ +++ +G S+ Sbjct: 120 ATRIIGPNCPGLISPGQSNAGIIPSDITKPGRIGLVSKSGTLTYQLMYELRD--IGFSSC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA+F+ + KP+V Sbjct: 178 VGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAARFIAERV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP GRTMGHAGA++SG G A K A++ AG+ + +P + LL Sbjct: 234 GYIAGFTAPEGRTMGHAGAIVSGSSGTARAKKEALEAAGVRVGATPTETAELVFALL 290 >gi|15669431|ref|NP_248241.1| succinyl-CoA synthetase subunit alpha [Methanocaldococcus jannaschii DSM 2661] gi|2500925|sp|Q58643|SUCD_METJA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|158431279|pdb|2YV1|A Chain A, Crystal Structure Of Succinyl-Coa Synthetase Alpha Chain From Methanocaldococcus Jannaschii Dsm 2661 gi|1591879|gb|AAB99250.1| succinyl-CoA synthetase, alpha subunit (sucD) [Methanocaldococcus jannaschii DSM 2661] Length = 294 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 152/298 (51%), Positives = 209/298 (70%), Gaps = 12/298 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN-VPVFTT 61 IL+D+NTK +VQG+TG+ G+FHT++ +L C T++VGG+ P KG G NV+ VPVF T Sbjct: 8 ILLDENTKAIVQGITGRQGSFHTKK-MLECGTKIVGGVTPGKG-----GQNVHGVPVFDT 61 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA + T ANASVI+VP A DA+ E+I+A I LIV ITE IPV D + E Sbjct: 62 VKEAVKETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVG 121 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 ++IGPN PGI +P K+GI+P + ++GSVG++SRSGTLTYE Q + G G ST V Sbjct: 122 VKIIGPNTPGIASPKVGKLGIIPMEVLKEGSVGMVSRSGTLTYEIAHQIKKAGFGVSTCV 181 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G + +VL+LF D+ TE+IVM+GEIGG AEEEAA+F++ KKP++G Sbjct: 182 GIGGDPIVGLRYKEVLDLFEKDDETEAIVMIGEIGGGAEEEAAKFIEK-----MKKPVIG 236 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG++AP G+ MGHAGA++ GKG AE K+ A++EAG +A + + I + L +LG Sbjct: 237 YIAGQSAPEGKRMGHAGAIVEKGKGTAESKMKALEEAGAYVAKNISDIPKLLAGILGK 294 >gi|312199953|ref|YP_004020014.1| succinyl-CoA synthetase, subunit alpha [Frankia sp. EuI1c] gi|311231289|gb|ADP84144.1| succinyl-CoA synthetase, alpha subunit [Frankia sp. EuI1c] Length = 290 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 138/301 (45%), Positives = 200/301 (66%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +D+N++++VQG+TG G+ H ++ + ++V G++ +K G VPVF Sbjct: 1 MAIWLDENSRIVVQGITGSEGSKHAKR-MAASGAKIVAGVNARKAGQSQDG----VPVFA 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 +VAEA E+T A+ SVI+VPP DA +E+I+AEIPL V ITEG+PV D A + K Sbjct: 56 SVAEAMEQTGADVSVIFVPPKFTKDAALEAIDAEIPLAVVITEGVPVHDTTSFFATAQAK 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +R+IGPNCPGI++P GI+P SI G +G++S+SGTLTY+ +++ G ST Sbjct: 116 GKTRIIGPNCPGIISPGKSNAGIIPASITPPGRIGLVSKSGTLTYQMMYELRD--FGFST 173 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPV GT ID L+ F AD T++IVM+GEIGG AEE AA ++ KP+ Sbjct: 174 GVGIGGDPVIGTIHIDALDAFEADPETDAIVMIGEIGGDAEERAAAHIEAHIT----KPV 229 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG+VAG TAP G+TMGHAGA++SG G A+ K A+++AG+ + +P+ R + +++ S Sbjct: 230 VGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEKAGVRVGKTPSETARLMADIMRS 289 Query: 300 L 300 L Sbjct: 290 L 290 >gi|309811914|ref|ZP_07705686.1| succinyl-CoA synthetase, alpha subunit [Dermacoccus sp. Ellin185] gi|308434126|gb|EFP57986.1| succinyl-CoA synthetase, alpha subunit [Dermacoccus sp. Ellin185] Length = 299 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 146/304 (48%), Positives = 199/304 (65%), Gaps = 11/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTY---WTGGNVNV 56 MSI ++ ++KV+VQG+TG G HT + +L T VVGG++PKK G T G V Sbjct: 1 MSIFLNADSKVIVQGMTGSEGMKHTAR-MLASGTNVVGGVNPKKAGQTVDFDVNGETKQV 59 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF +V +A T AN SVI+VPP A A +E+IEAE+PL V ITEGIPV D Sbjct: 60 PVFGSVKDAMAETGANVSVIFVPPPFAKSAAVEAIEAEMPLAVVITEGIPVKDSAEFYNL 119 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + S +RL+GPNCPGI++P GI+P +I KG +G++S+SGTLTY+ +++ G Sbjct: 120 SKGSKTRLLGPNCPGIISPGESNAGIIPANIAGKGRIGLVSKSGTLTYQMMYELRD--FG 177 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 STA+GIGGDPV GT ID LE F D T++IVM+GEIGG AEE AA ++K+ Sbjct: 178 FSTAIGIGGDPVIGTTHIDALEAFQNDPDTDAIVMIGEIGGDAEERAAAYIKENV----T 233 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ + E+ Sbjct: 234 KPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAAAKKEALEAAGVKVGKTPSETAALMTEI 293 Query: 297 LGSL 300 + +L Sbjct: 294 MNNL 297 >gi|183984519|ref|YP_001852810.1| succinyl-CoA synthetase (alpha chain) SucD [Mycobacterium marinum M] gi|183177845|gb|ACC42955.1| succinyl-CoA synthetase (alpha chain) SucD [Mycobacterium marinum M] Length = 300 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 153/307 (49%), Positives = 202/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT----GGNV-N 55 MSI ++K+ KV+VQG+TG T HT + +L TQ+VGG++ +K T T GG V Sbjct: 1 MSIFLNKDNKVIVQGITGSEATVHTAR-MLKAGTQIVGGVNARKAGTTVTHEDKGGRVIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF VAEA E+T A+ S+I+VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGGVAEAMEKTGADVSIIFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 L K +R+IGPNCPGI+TP +GI P +I G VG++S+SGTLTY+ +F+ Sbjct: 120 YNLGKGGKTRIIGPNCPGIITPGQALVGITPANITGAGPVGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G +T++GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -FGFTTSIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVQVGKTPSETAMLA 293 Query: 294 VELLGSL 300 E+L L Sbjct: 294 REILKGL 300 >gi|289192171|ref|YP_003458112.1| succinyl-CoA synthetase, alpha subunit [Methanocaldococcus sp. FS406-22] gi|288938621|gb|ADC69376.1| succinyl-CoA synthetase, alpha subunit [Methanocaldococcus sp. FS406-22] Length = 288 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 150/295 (50%), Positives = 205/295 (69%), Gaps = 10/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+ ++TK +VQG+TGK G+FHT++ +L C T++VGG+ P KG G VPVF TV Sbjct: 2 ILLTEDTKAIVQGITGKQGSFHTKK-MLDCGTKIVGGVTPGKGGKEVYG----VPVFDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA E T ANASVI+VP A DA+ E+I+A I LIV ITE IPV D + E Sbjct: 57 KEAVEETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++IGPN PGI +P K+GI+P + ++GSVG++SRSGTLTYE Q + G G ST VG Sbjct: 117 KIIGPNTPGIASPKVGKLGIIPMEVLQEGSVGMVSRSGTLTYEIAHQIKKAGFGVSTCVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP+ G + +VL+LF D+ TE+IVM+GEIGG AEEEA++F+K KKP++G+ Sbjct: 177 IGGDPIVGLRYKEVLDLFEKDDETEAIVMIGEIGGGAEEEASKFIKK-----MKKPVIGY 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG++AP G+ MGHAGA++ GKG AE K+ A++EAG +A + + I + L E+L Sbjct: 232 IAGQSAPEGKRMGHAGAIVEKGKGTAESKMKALEEAGAYVAKNISDIPKLLTEIL 286 >gi|163735508|ref|ZP_02142940.1| succinyl-CoA synthetase subunit alpha [Roseobacter litoralis Och 149] gi|161391128|gb|EDQ15465.1| succinyl-CoA synthetase subunit alpha [Roseobacter litoralis Och 149] Length = 295 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 140/301 (46%), Positives = 194/301 (64%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D++TKV++QG+TGK FHT+ + Y V G + K G T VPVF Sbjct: 1 MSILLDRDTKVIIQGITGKMARFHTKDMLEYGTRVVGGVVPGKGGETVE-----GVPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A AS+++VPP A D+I+E+ +A I VCIT+GIP DM+RVK + + Sbjct: 56 TVEEAVAQTGAEASLVFVPPPFAADSIMEAADAGIQYCVCITDGIPAQDMIRVKRYMYRY 115 Query: 121 SSR----LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L GPNC G ++P +GIMPG I+ +G+VGI+ RSGTL YEA Q + G+G Sbjct: 116 PKERRMVLTGPNCAGTISPGKALLGIMPGHIYLQGNVGIVGRSGTLGYEAAAQLKERGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+L+ F DE T I M+GEIGG E EAA++++ Sbjct: 176 VSTSVGIGGDPINGSSFKDILQRFEEDEDTHIIAMIGEIGGPQEAEAAEYIRTHI----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V +VAG TAP GRTMGHAGA+IS A +K+ + AG+ +A +PA IG ++ ++ Sbjct: 232 KPVVAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILSAAGVTVAENPAVIGETIAKV 291 Query: 297 L 297 + Sbjct: 292 M 292 >gi|254823467|ref|ZP_05228468.1| succinyl-CoA synthetase subunit alpha [Mycobacterium intracellulare ATCC 13950] Length = 300 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 151/307 (49%), Positives = 204/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT ++ TQVVGG++ +K T + G +V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHT-ALMMKAGTQVVGGVNARKAGTTVSHVDPVGRDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TVAEA + T AN SV++VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGTVAEAMKETGANVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 ++K +R+IGPNCPGI+TP GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 YNVDKGQKTRIIGPNCPGIITPGEALAGITPANISGPGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G ST++GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTSIGIGGDPVIGTTHIDAIEAFEKDPDTKVIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALA 293 Query: 294 VELLGSL 300 E+L +L Sbjct: 294 REILQNL 300 >gi|326334135|ref|ZP_08200362.1| succinyl-CoA synthetase, alpha subunit [Nocardioidaceae bacterium Broad-1] gi|325948111|gb|EGD40224.1| succinyl-CoA synthetase, alpha subunit [Nocardioidaceae bacterium Broad-1] Length = 298 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 150/305 (49%), Positives = 206/305 (67%), Gaps = 12/305 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG G HT +L Q+VGG++ +K T T G +V Sbjct: 1 MSIYLNKDSKVIVQGITGGMGAKHT-ALMLDSGAQIVGGVNARKAGTTVTHKDAQGADVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TVAEA + T AN SV++VPP+ DA IE+I+AE+PLIV ITEG+PV D V + Sbjct: 60 LPVFGTVAEAMKETGANVSVLFVPPAFTKDAAIEAIDAEMPLIVVITEGVPVQDTAEVWS 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 L+ ++R+IGPNCPGI+TP GI P +I KG VG++S+SGTLTY+ +++ Sbjct: 120 YLQGKATRMIGPNCPGIITPGESLAGITPHTITGKGPVGLVSKSGTLTYQMMYELKD--F 177 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G STA+GIGGDP+ GT ID LE F D+ T+ IVM+GEIGG AEE AA ++K+ Sbjct: 178 GFSTAIGIGGDPIIGTTHIDALEAFEKDDETKLIVMIGEIGGDAEERAAAYIKENI---- 233 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ E Sbjct: 234 SKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAALARE 293 Query: 296 LLGSL 300 +L SL Sbjct: 294 ILQSL 298 >gi|29829994|ref|NP_824628.1| succinyl-CoA synthetase subunit alpha [Streptomyces avermitilis MA-4680] gi|29607104|dbj|BAC71163.1| putative succinyl-CoA synthetase alpha subunit [Streptomyces avermitilis MA-4680] Length = 294 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 142/301 (47%), Positives = 202/301 (67%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++K++KV+VQG+TG G HT + +L T +VGG++P+K T ++PVF Sbjct: 1 MAIFLNKDSKVIVQGMTGATGMKHT-KLMLADGTNIVGGVNPRKAGTSVDIDGTDIPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD--MVRVKARLE 118 +VAEA E+T AN SV++VPP+ A A++E+I+AEIPL V ITEGI V D A+ + Sbjct: 60 SVAEAIEKTGANVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAYAKSK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA F+ + KP Sbjct: 178 SAVGIGGDPIIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAADFI----AKNVTKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P + +LG Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPTETAKLARAILG 293 Query: 299 S 299 S Sbjct: 294 S 294 >gi|240172865|ref|ZP_04751524.1| succinyl-CoA synthetase subunit alpha [Mycobacterium kansasii ATCC 12478] Length = 300 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 150/307 (48%), Positives = 201/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 M+I + K KV+VQG+TG T HT + +L T +VGG++ +K T T G V Sbjct: 1 MAIFLTKENKVIVQGITGSEATVHTAR-MLKAGTHIVGGVNARKAGTTVTHEDKGGRLVK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +V EA E+T A+ S+I+VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVTEAMEKTGADVSIIFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 ++K +R+IGPNCPGI+TP +GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNMQKGGKTRIIGPNCPGIITPGQALVGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALA 293 Query: 294 VELLGSL 300 E+L +L Sbjct: 294 REILKTL 300 >gi|110678493|ref|YP_681500.1| succinyl-CoA synthetase subunit alpha [Roseobacter denitrificans OCh 114] gi|109454609|gb|ABG30814.1| Malate-CoA ligase, alpha subunit, putative [Roseobacter denitrificans OCh 114] Length = 295 Score = 255 bits (652), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 141/301 (46%), Positives = 192/301 (63%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D +TKV+VQG+TGK FHT+ + Y V G + K G T VPVF Sbjct: 1 MSILLDSDTKVIVQGITGKMARFHTKDMLEYGTNVVGGVVPGKGGETVE-----GVPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A AS+++VPP A D+I+E+ +A I VCIT+GIP DM+RVK + + Sbjct: 56 TVEEAVAQTGAEASLVFVPPPFAADSIMEAADAGIQYCVCITDGIPAQDMIRVKRYMYRY 115 Query: 121 SSR----LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L GPNC G ++P +GIMPG I+ +G VGI+ RSGTL YEA Q + G+G Sbjct: 116 PKERRMVLTGPNCAGTISPGKALLGIMPGHIYLQGHVGIVGRSGTLGYEAAAQLKERGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+L+ F DE T I M+GEIGG E EAA++++ Sbjct: 176 VSTSVGIGGDPINGSSFKDILQRFEEDEDTHVIAMIGEIGGPQEAEAAEYIRAHV----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V +VAG TAP GRTMGHAGA+IS A +K+ + AG+ +A +PA IG ++ ++ Sbjct: 232 KPVVAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILSAAGVTVAENPAVIGETIAKV 291 Query: 297 L 297 + Sbjct: 292 M 292 >gi|317124201|ref|YP_004098313.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Intrasporangium calvum DSM 43043] gi|315588289|gb|ADU47586.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Intrasporangium calvum DSM 43043] Length = 297 Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 142/302 (47%), Positives = 198/302 (65%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVF 59 M+I ++ ++KV+VQG+TG G HT Q +L T +VGG++P+K G+T V VPVF Sbjct: 1 MAIFLNADSKVIVQGMTGSEGMKHT-QRMLKSGTTIVGGVNPRKAGTTVEFEDGVTVPVF 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE- 118 TV EA + T AN SVI+VP A +E+I+AEIPL V ITEG+ V D + Sbjct: 60 GTVREAIDATGANVSVIFVPAQFTKAAAVEAIDAEIPLAVVITEGVAVKDTAEFFTYAQS 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 K ++R+IGPNCPG++TP GI+P +I G +G++S+SGTLTY+ +++ G S Sbjct: 120 KGTTRIIGPNCPGLITPGVSNAGIIPATISGPGRIGLVSKSGTLTYQMMYELRD--FGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV GT ID LE F D T++IVM+GEIGG AEE AA ++K+ KP Sbjct: 178 TAVGIGGDPVIGTTHIDCLEAFQNDPDTDAIVMIGEIGGDAEERAAAYIKEHV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + E++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKQEALEAAGVKVGKTPSATAALMREIMQ 293 Query: 299 SL 300 L Sbjct: 294 GL 295 >gi|269128415|ref|YP_003301785.1| succinyl-CoA synthetase subunit alpha [Thermomonospora curvata DSM 43183] gi|268313373|gb|ACY99747.1| succinyl-CoA synthetase, alpha subunit [Thermomonospora curvata DSM 43183] Length = 295 Score = 255 bits (651), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 141/302 (46%), Positives = 200/302 (66%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + +N+KV+VQG+TG G+ HT + +L T VVGG++ +K +PVF Sbjct: 1 MAIWLTENSKVIVQGMTGSEGSKHTAR-MLRAGTNVVGGVNARKAGQTVDFDGKELPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR-LEK 119 TVAEA E+T A+ SV++VPP A DA++E+I+A I L V ITEGIPV D A EK Sbjct: 60 TVAEAMEKTGADTSVVFVPPKFAKDAVVEAIDAGIGLAVVITEGIPVHDTAYFWAYACEK 119 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +++R+IGPNCPGI +P GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNATRIIGPNCPGIASPGKSNAGIIPADITSPGRIGLVSKSGTLTYQLMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV GT ID L+ F D T++IVM+GEIGG AEE AA +++ KP Sbjct: 178 TCVGIGGDPVIGTTHIDALQAFQDDPETDAIVMIGEIGGDAEERAAAYIEQHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G AE K A+++ G+ + +P+ R + E++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAEAKKEALEKVGVRVGKTPSETARIMREVMQ 293 Query: 299 SL 300 +L Sbjct: 294 NL 295 >gi|239979920|ref|ZP_04702444.1| succinyl-CoA synthetase subunit alpha [Streptomyces albus J1074] gi|291451775|ref|ZP_06591165.1| succinyl-CoA synthetase subunit alpha [Streptomyces albus J1074] gi|291354724|gb|EFE81626.1| succinyl-CoA synthetase subunit alpha [Streptomyces albus J1074] Length = 294 Score = 255 bits (651), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 142/299 (47%), Positives = 198/299 (66%), Gaps = 12/299 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT + +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGATGMKHT-KLMLGDGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 +VAEA E+T A+ SVI+VPP A A++E+I+AEI L V ITEGI V D A Sbjct: 60 SVAEAIEKTGADVSVIFVPPKFAKAAVVEAIDAEIGLAVVITEGIAVHDSAAFWAYASSK 119 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA ++K KP Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPETDLIVMIGEIGGDAEERAADYIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP---ARIGRSLV 294 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P A + R+++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAELARAIL 292 >gi|297203636|ref|ZP_06921033.1| succinyl-CoA synthetase subunit alpha [Streptomyces sviceus ATCC 29083] gi|197717230|gb|EDY61264.1| succinyl-CoA synthetase subunit alpha [Streptomyces sviceus ATCC 29083] Length = 309 Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 135/300 (45%), Positives = 195/300 (65%), Gaps = 7/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K ++VLVQG+TG G HT + +L T VVGG++P+K + VPVF Sbjct: 1 MAIFLTKESRVLVQGMTGGEGMKHTRR-MLAAGTNVVGGVNPRKAGQRVDFDDRAVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VA+ T A+ +V++VPP AG A++E+++A I L V ITEGIPV D V + +K Sbjct: 60 SVADGIGATGADVTVVFVPPPFAGAAVVEAVDAGIALAVVITEGIPVHDSVAFTSYAKKK 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R++GPNCPG++TP GI+P I R G +G++S+SGTLTY+ +++ +G ST Sbjct: 120 GTRIVGPNCPGLITPGQSNAGIIPADITRSGRIGLVSKSGTLTYQLMYELRD--IGFSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L F D TE IV++GEIGG AEE AA ++++ KP+V Sbjct: 178 VGIGGDPVVGTTHIDCLAAFQDDPDTELIVLIGEIGGDAEERAAAYIREHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 G++AG TAP GRTMGHAGA++SG G A K A++ G+ + +P R +++LL ++ Sbjct: 234 GYIAGFTAPEGRTMGHAGAIVSGSAGTARAKKAALEAVGVKVGNTPTETARLVLDLLDTV 293 >gi|325981127|ref|YP_004293529.1| succinyl-CoA synthetase, alpha subunit [Nitrosomonas sp. AL212] gi|325530646|gb|ADZ25367.1| succinyl-CoA synthetase, alpha subunit [Nitrosomonas sp. AL212] Length = 295 Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 138/304 (45%), Positives = 197/304 (64%), Gaps = 13/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+++ TK++VQG TG+ GTFH ++ I Y + VVGG+ P KG G +PVF Sbjct: 1 MAILINEKTKIIVQGFTGRIGTFHAQEMIDYG-SNVVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA---RL 117 TV EA E+ A AS+++VPP+ A D+I+E+ +A I V IT+GIP DM+ VK R Sbjct: 56 TVKEAVEQVGAEASIVFVPPAFAADSIMEAADAGIKYCVSITDGIPTQDMMTVKNFLRRF 115 Query: 118 EKSSSRLI-GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K+ L+ GPNC G ++P +GIMPG I+ +G+VG++ RSGTL YEA Q G+G Sbjct: 116 PKTERMLLTGPNCAGTISPGRAMLGIMPGHIYIRGNVGVVGRSGTLGYEAADQMRLLGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ D+LE D T+ +M+GEIGG E +A +F AK Sbjct: 176 ISTSVGIGGDPIPGSSHRDILERLEQDPETKVALMIGEIGGPQEVDAGKF----AKENMS 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ ++AG TAP GR MGHAGA+IS A +K+ +KE G+ I P+P+ +G+++ E+ Sbjct: 232 KPLIAYIAGLTAPEGRRMGHAGAIISSAGESAAEKVAMLKELGVTICPTPSLMGQTVAEV 291 Query: 297 LGSL 300 L L Sbjct: 292 LAKL 295 >gi|302869842|ref|YP_003838479.1| succinyl-CoA synthetase subunit alpha [Micromonospora aurantiaca ATCC 27029] gi|315501304|ref|YP_004080191.1| succinyl-CoA synthetase, alpha subunit [Micromonospora sp. L5] gi|302572701|gb|ADL48903.1| succinyl-CoA synthetase, alpha subunit [Micromonospora aurantiaca ATCC 27029] gi|315407923|gb|ADU06040.1| succinyl-CoA synthetase, alpha subunit [Micromonospora sp. L5] Length = 295 Score = 254 bits (650), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 136/299 (45%), Positives = 195/299 (65%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G+ HT + +L T VVGG++P+K T +PVF Sbjct: 1 MAIWLTKDSKVIVQGMTGSEGSKHTRR-MLAAGTNVVGGVNPRKAGTTVDFDGTELPVFA 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA--RLE 118 +VA+A + T A+ +VI+VPP A++E+I+A I L V ITEG+PV D A R + Sbjct: 60 SVADAMKETGADVTVIFVPPQFTKAAVVEAIDAGIDLAVVITEGVPVHDTAAFWAYNRAQ 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPGI +P + GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GERTRIIGPNCPGIASPGASNAGIIPADITGSGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID L F AD T++IVM+GEIGG AEE AA+F+K KP Sbjct: 178 TCVGIGGDPIIGTTHIDALAAFEADPETDAIVMIGEIGGDAEERAAEFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAPPG+TMGHAGA+ISG G A+ K A++ G+ + +P + E++ Sbjct: 234 VVGYIAGFTAPPGKTMGHAGAIISGSAGTADAKKAALEAVGVKVGKTPTETANLMREIM 292 >gi|227494731|ref|ZP_03925047.1| succinate--CoA ligase (ADP-forming) [Actinomyces coleocanis DSM 15436] gi|226831731|gb|EEH64114.1| succinate--CoA ligase (ADP-forming) [Actinomyces coleocanis DSM 15436] Length = 308 Score = 254 bits (650), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 142/314 (45%), Positives = 201/314 (64%), Gaps = 21/314 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT---------- 50 M+I +++++KV+VQG+TG GT HT + ++ TQ+VGG++P+K + Sbjct: 1 MTIFLNRDSKVIVQGMTGGEGTKHTTR-MIAAGTQIVGGVNPRKAGQVQSFDITPYGPQA 59 Query: 51 ----GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G VPVF TVAEAKE T AN SVI+VPP DA++E++ A++ L+V ITEG+P Sbjct: 60 DEVRPGIHEVPVFGTVAEAKEATGANVSVIFVPPRFTKDAVLEAVAAKLDLVVVITEGVP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D V + ++ RLIGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VQDSVEFRQAAAEAGVRLIGPNCPGIISPGQSNVGITPADITGPGRIGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ S LG +T +GIGGDPV GT ID LE F AD T+ IVM+GEIGG AEE AA+F Sbjct: 180 MYELSD--LGFTTCIGIGGDPVIGTTHIDALEAFEADPDTDVIVMIGEIGGDAEERAAEF 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 + KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IAKHV----TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQAALEAVGVKVGKTP 293 Query: 287 ARIGRSLVELLGSL 300 + E++ +L Sbjct: 294 TETANLVREVIATL 307 >gi|297158167|gb|ADI07879.1| succinyl-CoA synthetase subunit alpha [Streptomyces bingchenggensis BCW-1] Length = 294 Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 139/290 (47%), Positives = 191/290 (65%), Gaps = 9/290 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KV+VQG+TG G HT + +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKESKVIVQGMTGSEGQKHTRR-MLASGTNIVGGVNPRKAGTKVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E T A+ +VI+VP DA+IE+I+AEIPL V ITEGI V D A + Sbjct: 60 TVKEAIEATGADVTVIFVPEKFTKDAVIEAIDAEIPLAVVITEGIAVHDTANFWAYAGQK 119 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+P +I + G +G++S+SGTLTY+ +++ S +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPANITKPGRIGLVSKSGTLTYQMMYELSD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + VGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA F+K KP Sbjct: 178 SCVGIGGDPIIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSE 283 >gi|135029|sp|P09143|SUCD_THETH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|68575|pir||SYTWSA succinate-CoA ligase (ADP-forming) (EC 6.2.1.5) alpha chain [validated] - Thermus aquaticus gi|48178|emb|CAA38007.1| succinate--CoA ligase (ADP-forming) [Thermus thermophilus] gi|581794|emb|CAA39507.1| succinyl-CoA synthetase [Thermus aquaticus] gi|227823|prf||1712304D succinyl CoA synthetase:SUBUNIT=alpha Length = 288 Score = 254 bits (649), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 155/283 (54%), Positives = 197/283 (69%), Gaps = 9/283 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ILV++ T+VLVQG+TG+ G FHT+Q + Y T++V G+ P KG T G VPV+ TV Sbjct: 2 ILVNRETRVLVQGITGREGQFHTKQMLDYG-TKIVAGVTPGKGGTEVLG----VPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA +AS+I+VP A DA +E+ A IPLIV ITEGIP LDMVR ++ S Sbjct: 57 KEAVAHHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIG NCPGI++ + KIGIMPG +F++G VGI+SRSGTLTYEA SQ GLG +T VG Sbjct: 117 RLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEAAAALSQAGLGTTTTVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT F D+L LF D TE++V++GEIGGS EEEAA ++KD KKP+VGF Sbjct: 177 IGGDPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKDHM----KKPVVGF 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + G++AP G+ MGHAGA+I G G E K+ A EAGI +A + Sbjct: 233 IGGRSAPKGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADT 275 >gi|126740183|ref|ZP_01755872.1| succinyl-CoA synthetase subunit alpha [Roseobacter sp. SK209-2-6] gi|126718638|gb|EBA15351.1| succinyl-CoA synthetase subunit alpha [Roseobacter sp. SK209-2-6] Length = 296 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 137/301 (45%), Positives = 188/301 (62%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D++++V+VQG+TGK FHT+ I Y V VPVF Sbjct: 1 MSILLDRSSRVIVQGITGKIARFHTKDMIEYGTNVVG-----GVVPGKGGEVVEGVPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A+AS+++VPP A D+I+E+ +A I VCIT+GIP DM+RVK + + Sbjct: 56 TVKEAVEATDADASIVFVPPPFAADSIMEAADAGIRYCVCITDGIPAQDMIRVKRYMYRY 115 Query: 121 SSR----LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L GPNC G ++P +GIMPG I+ G+VGI+ RSGTL YEA Q + G+G Sbjct: 116 PRDKRMVLTGPNCAGTISPGKALLGIMPGHIYLPGNVGIIGRSGTLGYEAAAQLKEYGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+L+ F D TE I M+GEIGG E EAA ++K+ Sbjct: 176 VSTSVGIGGDPINGSSFKDILQWFEQDPETEVIAMIGEIGGPQEAEAADYIKNHV----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ +VAG TAP GRTMGHAGA+IS A +K+ + AG+ +A +PA IG ++ + Sbjct: 232 KPVIAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILSAAGVIVAENPAVIGETIARV 291 Query: 297 L 297 + Sbjct: 292 M 292 >gi|110681360|ref|YP_684367.1| succinyl-CoA synthetase subunit alpha [Roseobacter denitrificans OCh 114] gi|109457476|gb|ABG33681.1| malate-CoA ligase, alpha subunit, putative [Roseobacter denitrificans OCh 114] Length = 297 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 142/301 (47%), Positives = 187/301 (62%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +D NT V+VQG+TGK FHT I Y V G + K G T VPVF Sbjct: 1 MSIFIDANTPVIVQGITGKMARFHTADMIAYGTNVVGGVVPGKGGQTVE-----GVPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A AS+++VPP A D+I+E+ +A I VCIT+GIP DM+RVK + + Sbjct: 56 TVEDAVTATGAEASLVFVPPPFAADSIMEAADAGIQYCVCITDGIPAQDMIRVKRYMYRY 115 Query: 121 SSR----LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L GPNC G ++P +GIMPG I+ G VGI+ RSGTL YEA Q + G+G Sbjct: 116 PKDRRMVLTGPNCAGTISPGKALLGIMPGHIYLPGHVGIIGRSGTLGYEAAAQLKEHGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+LE F AD+ T I M+GEIGG E EAA +++D Sbjct: 176 VSTSVGIGGDPINGSSFRDILERFEADDETHVICMIGEIGGPQEAEAAAYIRDHV----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ +VAG TAP GRTMGHAGA+IS A +K+ + AG+ +A +PA IG ++ + Sbjct: 232 KPVIAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILSAAGVTVAENPAVIGDTIAGV 291 Query: 297 L 297 L Sbjct: 292 L 292 >gi|46198477|ref|YP_004144.1| succinyl-CoA synthetase alpha chain [Thermus thermophilus HB27] gi|46196099|gb|AAS80517.1| succinyl-CoA synthetase alpha chain [Thermus thermophilus HB27] Length = 288 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 154/283 (54%), Positives = 197/283 (69%), Gaps = 9/283 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ILV++ T+VLVQG+TG+ G FHT+Q + Y T++V G+ P KG T G +PV+ TV Sbjct: 2 ILVNRETRVLVQGITGREGQFHTKQMLSYG-TKIVAGVTPGKGGTEVLG----IPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA +AS+I+VP A DA +E+ A IPLIV ITEGIP LDMVR ++ S Sbjct: 57 KEAVAHHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIG NCPGI++ + KIGIMPG +F++G VGI+SRSGTLTYEA SQ GLG +T VG Sbjct: 117 RLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEAAAALSQAGLGTTTTVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT F D+L LF D TE++V++GEIGGS EEEAA ++KD KKP+VGF Sbjct: 177 IGGDPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKDHM----KKPVVGF 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + G++AP G+ MGHAGA+I G G E K+ A EAGI +A + Sbjct: 233 IGGRSAPKGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADT 275 >gi|296169712|ref|ZP_06851329.1| succinyl-CoA synthetase subunit alpha [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895609|gb|EFG75306.1| succinyl-CoA synthetase subunit alpha [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 300 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 152/307 (49%), Positives = 203/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQVVGG++ +K T + G +V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHT-ALMLKAGTQVVGGVNARKAGTTVSHVDPVGKDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TVAEA + T AN SV +VPP A DA+IE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGTVAEAMKETGANVSVGFVPPKFAKDAMIEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 ++K +R+IGPNCPGI+TP GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 YNVDKGQKTRIIGPNCPGIITPGEALAGITPANISGPGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G ST++GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTSIGIGGDPVIGTTHIDAIEAFEKDPDTKVIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVRVGKTPSETAALA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILQSL 300 >gi|296242754|ref|YP_003650241.1| succinyl-CoA synthetase subunit alpha [Thermosphaera aggregans DSM 11486] gi|296095338|gb|ADG91289.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Thermosphaera aggregans DSM 11486] Length = 289 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 136/291 (46%), Positives = 196/291 (67%), Gaps = 11/291 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHP-KKGSTYWTGGNVNVPVF 59 M IL+ +NT+V+VQG+TGK G+FHT+ + Y T++V G P KKG T VPV+ Sbjct: 1 MGILLSRNTRVIVQGVTGKEGSFHTKLMLEYG-TRIVAGTSPGKKGQTVH-----GVPVY 54 Query: 60 TTVAE-AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 TV E ++ +AS+I+VP A DA+ E+I+ + L+V ITEGIP+ D ++ Sbjct: 55 NTVGEIVRDHGEIDASIIFVPAKFAPDAVYEAIDNGVKLVVVITEGIPLHDELKFVNYAR 114 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + ++GPN PG++TP K+GIMP +F G VGI+SRSGTLTYE + ++ GLG S Sbjct: 115 RKGVIIVGPNTPGLMTPGEAKLGIMPSHVFVPGGVGIVSRSGTLTYEVARELAKHGLGVS 174 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +G+GGDPV G +FI+V ++F D +T+++V++GEIGG AEE +F K A KKP Sbjct: 175 TVIGLGGDPVTGLDFIEVYDMFSNDPSTKAVVLIGEIGGDAEE---RFSKYYASLRVKKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +V ++AG+TAPPG+ MGHAGA+IS G G K A++EAGI +A +P++I Sbjct: 232 VVAYIAGRTAPPGKRMGHAGAIISMGIGDYPSKRRALEEAGIPVAETPSQI 282 >gi|33357757|pdb|1OI7|A Chain A, The Crystal Structure Of Succinyl-Coa Synthetase Alpha Subunit From Thermus Thermophilus Length = 288 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 154/283 (54%), Positives = 196/283 (69%), Gaps = 9/283 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ILV++ T+VLVQG+TG+ G FHT+Q + Y T++V G+ P KG G VPV+ TV Sbjct: 2 ILVNRETRVLVQGITGREGQFHTKQMLTYG-TKIVAGVTPGKGGMEVLG----VPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA +AS+I+VP A DA +E+ A IPLIV ITEGIP LDMVR ++ S Sbjct: 57 KEAVAHHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIG NCPGI++ + KIGIMPG +F++G VGI+SRSGTLTYEA SQ GLG +T VG Sbjct: 117 RLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEAAAALSQAGLGTTTTVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT F D+L LF D TE++V++GEIGGS EEEAA ++KD KKP+VGF Sbjct: 177 IGGDPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKDHM----KKPVVGF 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + G++AP G+ MGHAGA+I G G E K+ A EAGI +A + Sbjct: 233 IGGRSAPKGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADT 275 >gi|325969472|ref|YP_004245664.1| succinyl-CoA synthetase, subunit alpha [Vulcanisaeta moutnovskia 768-28] gi|323708675|gb|ADY02162.1| succinyl-CoA synthetase, alpha subunit [Vulcanisaeta moutnovskia 768-28] Length = 292 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 132/292 (45%), Positives = 197/292 (67%), Gaps = 12/292 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV++NTKVLVQG+TG G+ H + + Y T+VV G+ P KG G +PVF Sbjct: 1 MAILVNENTKVLVQGITGNEGSRHAQYMLQYG-TKVVAGVTPGKGGQTVQG----IPVFD 55 Query: 61 TVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV +A ++ N S+I+VP A D++ E+I+A I L+V ITE IP+ D +R ++ Sbjct: 56 TVEDALRKFPDINTSIIFVPARFASDSVYEAIDAGIKLVVIITEHIPIHDALRFVNYSKR 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRK-GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +IGPNCPG+++P K+GI+P I+ K G VGI+SRSGTLTYE + +Q G+GQS Sbjct: 116 KGTTIIGPNCPGVVSPLKSKVGILPNHIYTKSGPVGIVSRSGTLTYEISYHLTQAGIGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KK 237 T VGIGGDP+ GT+ ++++++F D T+ IV++GEIGG+ EE AQ++ G+ K Sbjct: 176 TVVGIGGDPIIGTDMLEIVKMFEEDPETKYIVVIGEIGGTMEERLAQYIGS----GKVTK 231 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 P+V +++G+TAPPG+ MGHAGA++S G G E K+ A +E + +A +P + Sbjct: 232 PVVAYISGRTAPPGKRMGHAGAIVSMGMGSYESKVKAFQEVNVPVARTPTEV 283 >gi|256810340|ref|YP_003127709.1| succinyl-CoA synthetase, alpha subunit [Methanocaldococcus fervens AG86] gi|256793540|gb|ACV24209.1| succinyl-CoA synthetase, alpha subunit [Methanocaldococcus fervens AG86] Length = 288 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 149/295 (50%), Positives = 207/295 (70%), Gaps = 10/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NT+ +VQG+TG+ G+FHT++ +L C T++VGG+ P KG G VPVF TV Sbjct: 2 ILLDENTRAIVQGITGRQGSFHTKK-MLECGTKIVGGVTPGKGGQEVHG----VPVFDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA + T ANASVI+VP A DA+ E+I+A I LIV ITE IPV D + E+ Sbjct: 57 KEAVKETDANASVIFVPAPFAKDAVFEAIDAGIDLIVVITEHIPVHDTMEFVNYAEEVGV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++IGPN PGI +P K+GI+P + ++GSVGI+SRSGTLTYE Q + G G ST VG Sbjct: 117 KIIGPNTPGIASPKVGKLGIIPMEVLQEGSVGIVSRSGTLTYEIAHQIKKAGFGVSTCVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP+ G + +VL+LF D TE+IVM+GEIGG AEEEAA+F+K+ +KP++G+ Sbjct: 177 IGGDPIVGLRYREVLDLFEKDGETEAIVMIGEIGGGAEEEAAKFIKN-----MEKPVIGY 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG++AP G+ MGHAGA++ GKG AE K+ A+++AG +A + + I + L E+L Sbjct: 232 IAGQSAPEGKRMGHAGAIVEKGKGTAESKMRALEDAGAYVARNISDIPKLLAEIL 286 >gi|307332149|ref|ZP_07611235.1| succinyl-CoA synthetase, alpha subunit [Streptomyces violaceusniger Tu 4113] gi|306882214|gb|EFN13314.1| succinyl-CoA synthetase, alpha subunit [Streptomyces violaceusniger Tu 4113] Length = 298 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 141/297 (47%), Positives = 193/297 (64%), Gaps = 7/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT + +L T VVGG++P+K T VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGAEGMKHTRR-MLAAGTDVVGGVNPRKAGTRVDIDGAAVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA + T A+ SV++VPP A A+ E+ +A IPL V ITEGIPV D V +A Sbjct: 60 SVREAMDATGADVSVLFVPPPHAKAAVTEAADARIPLAVVITEGIPVHDAVAFQAYARAR 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++R+IGPNCPG+++P GI+P I + G +G++S+SGTLTY+ +++ +G ST Sbjct: 120 ATRIIGPNCPGLISPGQSNAGIIPADITKPGRIGLVSKSGTLTYQLMYELRD--IGFSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA++L D KP+V Sbjct: 178 VGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAARYLADHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP GRTMGHAGA++SG G A K A++ AG+ + +P +V LL Sbjct: 234 GYIAGFTAPEGRTMGHAGAIVSGSSGTAAAKKAALEAAGVRVGATPTETAGLVVALL 290 >gi|295838516|ref|ZP_06825449.1| succinyl-CoA synthetase, alpha subunit [Streptomyces sp. SPB74] gi|302519547|ref|ZP_07271889.1| succinyl-CoA synthetase subunit alpha [Streptomyces sp. SPB78] gi|318058779|ref|ZP_07977502.1| succinyl-CoA synthetase subunit alpha [Streptomyces sp. SA3_actG] gi|318078964|ref|ZP_07986296.1| succinyl-CoA synthetase subunit alpha [Streptomyces sp. SA3_actF] gi|333026622|ref|ZP_08454686.1| putative succinyl-CoA synthetase subunit alpha [Streptomyces sp. Tu6071] gi|295827037|gb|EFG65202.1| succinyl-CoA synthetase, alpha subunit [Streptomyces sp. SPB74] gi|302428442|gb|EFL00258.1| succinyl-CoA synthetase subunit alpha [Streptomyces sp. SPB78] gi|332746474|gb|EGJ76915.1| putative succinyl-CoA synthetase subunit alpha [Streptomyces sp. Tu6071] Length = 294 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 141/300 (47%), Positives = 199/300 (66%), Gaps = 12/300 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KV+VQG+TG G HT + +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKESKVIVQGMTGATGMKHT-RLMLGDGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 +VAEA + T A+ SVI+VPP+ A A+IE+I+AEI L V ITEGI V D A + Sbjct: 60 SVAEAIKETGADVSVIFVPPAFAKAAVIEAIDAEIGLAVVITEGIAVHDSAAFWAYAQSK 119 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G + Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFT 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA ++K KP Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPETDLIVMIGEIGGDAEERAADYIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP---ARIGRSLVE 295 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P A++ R+++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAKLARAILN 293 >gi|158317721|ref|YP_001510229.1| succinyl-CoA synthetase subunit alpha [Frankia sp. EAN1pec] gi|158113126|gb|ABW15323.1| succinyl-CoA synthetase, alpha subunit [Frankia sp. EAN1pec] Length = 290 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 140/301 (46%), Positives = 197/301 (65%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +D+N++V+VQG+TG G+ HT + +L T+VV G++ +K G VPVF Sbjct: 1 MAIWLDENSRVVVQGITGGEGSKHTRR-MLAAGTKVVAGVNARKVGQQVEG----VPVFG 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 +VA+A T AN SVI+VPP DA IE+++A IPL V ITEG+PV D A + K Sbjct: 56 SVADAMAETGANVSVIFVPPRFTKDAAIEAVDAAIPLAVVITEGVPVHDTTEFFAYSQSK 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++R+IGPNCPGI +P GI+P I G +G++S+SGTLTY+ +++ + G ST Sbjct: 116 GTTRIIGPNCPGIASPGVSNAGIIPADITPGGRIGLVSKSGTLTYQMMYELRE--FGFST 173 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPV GT ID L+ F AD T++IVM+GEIGG AEE AA + KP+ Sbjct: 174 CVGIGGDPVIGTTHIDALDAFQADPGTDAIVMIGEIGGDAEERAAAHIDAHVT----KPV 229 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG+VAG TAP G+TMGHAGA++SG G A+ K A+++AG+ + +P R + +++ S Sbjct: 230 VGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEKAGVRVGKTPTETARLMADIMRS 289 Query: 300 L 300 L Sbjct: 290 L 290 >gi|307946998|ref|ZP_07662333.1| malate--CoA ligase subunit alpha [Roseibium sp. TrichSKD4] gi|307770662|gb|EFO29888.1| malate--CoA ligase subunit alpha [Roseibium sp. TrichSKD4] Length = 292 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 139/301 (46%), Positives = 191/301 (63%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++++T+V+VQG+TG+ FHT+ + Y V G + K G T VPVF Sbjct: 1 MSIYLNRDTRVIVQGITGRMAQFHTKDMLAYGTNVVGGVVPGKGGETVH-----GVPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A+AS+++VPP A D+I+E+ +A I VCIT+GIP DM++VK + + Sbjct: 56 TVKEAVEATQADASLVFVPPPFAADSIMEAADAGIRYCVCITDGIPAQDMIQVKRYMMRY 115 Query: 121 SSR----LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L GPNC G ++P +GIMPG IF G VGI+ RSGTL YEA Q + G+G Sbjct: 116 PKECRMVLTGPNCAGTISPGKAMLGIMPGHIFLPGHVGIVGRSGTLGYEAAAQLKERGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+LE F D+ T I M+GEIGG E EAA +++D Sbjct: 176 VSTSVGIGGDPINGSSFRDILEQFENDDDTHVIAMIGEIGGPQEAEAAAYIQDHV----S 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V +VAG TAP GRTMGHAGA+IS A +K+ + AG+ +A +PA IG ++ + Sbjct: 232 KPVVAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILSGAGVTVAENPAVIGETIASV 291 Query: 297 L 297 + Sbjct: 292 M 292 >gi|55980506|ref|YP_143803.1| succinyl-CoA synthetase subunit alpha [Thermus thermophilus HB8] gi|55771919|dbj|BAD70360.1| succinyl-CoA synthetase alpha chain [Thermus thermophilus HB8] Length = 288 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 154/283 (54%), Positives = 196/283 (69%), Gaps = 9/283 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ILV++ T+VLVQG+TG+ G FHT+Q + Y T++V G+ P KG G VPV+ TV Sbjct: 2 ILVNRETRVLVQGITGREGQFHTKQMLSYG-TKIVAGVTPGKGGMEVLG----VPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA +AS+I+VP A DA +E+ A IPLIV ITEGIP LDMVR ++ S Sbjct: 57 KEAVAHHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIG NCPGI++ + KIGIMPG +F++G VGI+SRSGTLTYEA SQ GLG +T VG Sbjct: 117 RLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEAAAALSQAGLGTTTTVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT F D+L LF D TE++V++GEIGGS EEEAA ++KD KKP+VGF Sbjct: 177 IGGDPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKDHM----KKPVVGF 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + G++AP G+ MGHAGA+I G G E K+ A EAGI +A + Sbjct: 233 IGGRSAPKGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADT 275 >gi|320334599|ref|YP_004171310.1| succinyl-CoA synthetase subunit alpha [Deinococcus maricopensis DSM 21211] gi|319755888|gb|ADV67645.1| succinyl-CoA synthetase, alpha subunit [Deinococcus maricopensis DSM 21211] Length = 301 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 138/294 (46%), Positives = 197/294 (67%), Gaps = 20/294 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++++T+VLV G+TG+ G HT +A+ T+VV G+ P KG G +PV+ Sbjct: 1 MSILINQDTQVLVVGMTGREGANHT-KAMREFGTKVVAGVTPGKGGQTHEG----LPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+ + +AS+I+VPP+GA DA++ES A +PLI+ ITEG+P +DM+R ++ Sbjct: 56 SVGEAQAQHQIDASIIFVPPAGAADAVLESAYAGVPLIILITEGVPTVDMMRAVQEVKTL 115 Query: 121 SS----------RLIGPNCPGILTPDSCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQ 169 ++ RLIG NCPG+++ KIGIMP I++ KG +G++SRSGTLTYEA Sbjct: 116 NAQSLEQGGKGVRLIGGNCPGLVSSGEAKIGIMPNRIYQQKGRIGLISRSGTLTYEAGKL 175 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 GLG ST VGIGGDPV GT F DVL LF D T++IV++GEIGG+ EE AA+++++ Sbjct: 176 LLDAGLGTSTTVGIGGDPVIGTTFADVLPLFEQDPDTDAIVVIGEIGGADEEAAAEYIQN 235 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 KKP+V F++G++AP G+ MGHAGA+I G G E K+ A K A + +A Sbjct: 236 H----MKKPVVAFISGRSAPAGKRMGHAGAIIMGNVGTPESKLAAFKAANVPVA 285 >gi|301057856|ref|ZP_07198924.1| succinate-CoA ligase, alpha subunit [delta proteobacterium NaphS2] gi|300448052|gb|EFK11749.1| succinate-CoA ligase, alpha subunit [delta proteobacterium NaphS2] Length = 293 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 139/299 (46%), Positives = 195/299 (65%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T++LVQG+TG G F+T I Y T VV G+ P KG + W VPVF Sbjct: 1 MSILIDEGTRLLVQGITGSEGGFYTHGCIEY-GTNVVAGVTPGKGGSLWAE---KVPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A T ANAS+I+VP + A DA E+ A + I+ ITE IP LDM RV+ +++ Sbjct: 57 TVENAVRETGANASIIFVPAAFAADAAFEAAYAGLSPIILITEFIPTLDMARVRNFVKEK 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG+++P CK GIM F G VG++SRSGTLTYE +++ +GQST Sbjct: 117 GVYLIGPNCPGVISPGKCKAGIMIPQAFMPGRVGVISRSGTLTYEVAAMLTEKEIGQSTC 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGD + GT +VL LF D T+++V++GEIGG E+ AA+F++++ KP+V Sbjct: 177 VGVGGDQIPGTTMAEVLALFEKDAETDAVVLIGEIGGGFEQTAAEFIREK----MSKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+++G +G AE+K A+ +AG + +P + + ++L S Sbjct: 233 AFIAGSTAPPGRRMGHAGAIVTGKEGRAEEKKKALADAGATVVDTPPELSDMIKKVLNS 291 >gi|123976133|ref|XP_001330450.1| hypothetical protein [Trichomonas vaginalis G3] gi|1710866|sp|P53400|SUCA2_TRIVA RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha-2; Short=SCS-alpha-2; Flags: Precursor gi|538511|gb|AAC41559.1| succinyl CoA synthetase-2 alpha subunit [Trichomonas vaginalis] gi|2290208|gb|AAC48338.1| adhesin protein AP33-2 [Trichomonas vaginalis] gi|121896794|gb|EAY01935.1| hypothetical protein TVAG_047890 [Trichomonas vaginalis G3] Length = 309 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 147/299 (49%), Positives = 210/299 (70%), Gaps = 8/299 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DK+T+V++QG+ G G +H+ Y T+VVG +HPKK G +P+F + Sbjct: 15 LFIDKDTRVVIQGI-GNQGQYHSRLMREYG-TKVVGAVHPKKAGKIIAG----LPIFKNM 68 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E +RT ANAS+I+VP GA A IE+ EA + L+VCITE IP DM++VK ++++ Sbjct: 69 KEVVKRTDANASLIFVPAPGAAAACIEAAEAGMGLVVCITEHIPQHDMIKVKKVMKETGC 128 Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +LIGPNCPG++ P + K+GI+P +IFR G +GI+SRSGTLTYEA + T+Q GLGQST V Sbjct: 129 QLIGPNCPGLIQPGTHTKLGIIPTNIFRNGKIGIVSRSGTLTYEAAYATTQAGLGQSTVV 188 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP G DV++ F AD TE I+++GEIGG++EE+AA+++ + K ++KP+V Sbjct: 189 GIGGDPFAGQLHTDVIKRFAADPQTEGIILIGEIGGTSEEDAAEWIA-KTKLTQEKPVVA 247 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPG+ MGHAGA++SGGKG AE K A++ AG+ IA P +G+ + E + L Sbjct: 248 FIAGATAPPGKRMGHAGAIVSGGKGTAEGKYKALEAAGVRIARHPGNMGKFIFEEMKRL 306 >gi|297618949|ref|YP_003707054.1| succinyl-CoA synthetase subunit alpha [Methanococcus voltae A3] gi|297377926|gb|ADI36081.1| succinyl-CoA synthetase, alpha subunit [Methanococcus voltae A3] Length = 287 Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 136/296 (45%), Positives = 198/296 (66%), Gaps = 11/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN-VPVFTT 61 IL++++T+V+VQG+TG G FHT+ +L T +V G+ P K G NV +PVF + Sbjct: 2 ILLNEDTRVIVQGITGNQGRFHTKN-MLETNTNIVAGVTPGK-----KGQNVQGIPVFDS 55 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V E E ANASVI++P A DA E+I+A + LI ITE IPV D + + +K Sbjct: 56 VLETVEEYDANASVIFIPAPFAKDAAFEAIDAGLDLITIITEHIPVQDAIDIVNYGKKCG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +IGPN PG+ +P K+GI+P S+ ++G++G++SRSGTLTYE Q +Q G GQST V Sbjct: 116 VDIIGPNTPGLASPKVGKMGIIPMSVLKEGNIGMVSRSGTLTYEVANQLTQNGHGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G +I++LE F D+ T++IVM+GEIGGSAEEE A+ L ++ KKP++ Sbjct: 176 GIGGDPIIGLRYIEILERFEKDDETDAIVMIGEIGGSAEEETAEKLINK----MKKPVIS 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG++AP G+ MGHAGA+I G G A+ K+ A++EAG +A + I + E++ Sbjct: 232 YIAGQSAPEGKRMGHAGAIIEKGAGTAQSKMKALEEAGALVAKKISEIPTLINEVI 287 >gi|226356090|ref|YP_002785830.1| succinate--CoA ligase (succinyl-CoA synthetase) subunit alpha [Deinococcus deserti VCD115] gi|226318080|gb|ACO46076.1| putative succinate--CoA ligase (succinyl-CoA synthetase) alpha subunit [Deinococcus deserti VCD115] Length = 301 Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 143/294 (48%), Positives = 193/294 (65%), Gaps = 20/294 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M ILVDKN+KV+VQG+TG+ G H+ +A+ TQVV G+ P KG T + G PV+ Sbjct: 1 MGILVDKNSKVIVQGMTGREGASHS-RAMKEFGTQVVAGVTPGKGGTDFEG----WPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEAKE+ AN S+I+VPP+GA DA++E+ A +PLIV ITEG+P +DM+R + + Sbjct: 56 SVAEAKEKHGANVSIIFVPPAGAADAVLEAAHAGMPLIVLITEGVPTVDMMRAVQEVNQL 115 Query: 121 SS----------RLIGPNCPGILTPDSCKIGIMPGSIFRK-GSVGILSRSGTLTYEAVFQ 169 + RLIG NCPG++T K+GIMP I+ G +G++SRSGTLTYEA Sbjct: 116 DAQNRAQGGQGIRLIGGNCPGLVTNGEAKVGIMPNKIYTNPGRIGLISRSGTLTYEAAKL 175 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + GLG ST VGIGGDPV GT F DVL LF AD T++++++GEIGG+ EE AA Sbjct: 176 LNDAGLGTSTTVGIGGDPVIGTTFADVLPLFEADPDTDAVIVIGEIGGADEEAAAA---- 231 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 KKP+V F++G++AP G+ MGHAGA+I G G E K+ A A + +A Sbjct: 232 YIAENMKKPVVAFISGRSAPKGKRMGHAGAIIMGDVGTPESKLAAFAAANVPVA 285 >gi|296140991|ref|YP_003648234.1| succinyl-CoA synthetase, subunit alpha [Tsukamurella paurometabola DSM 20162] gi|296029125|gb|ADG79895.1| succinyl-CoA synthetase, alpha subunit [Tsukamurella paurometabola DSM 20162] Length = 300 Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 149/307 (48%), Positives = 202/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 M+I + K+ KV+VQG+TG GT HT +L T VVGG++ +K T + G V Sbjct: 1 MAIFLTKDNKVIVQGITGGEGTKHT-ALMLKAGTNVVGGVNARKAGTTVSHTDKDGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+ +VPP+ + DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAIEKTGADTSIAFVPPAFSKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 ++K +R+IGPNCPGI+TP +GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 YNVDKGQKTRIIGPNCPGIITPGEALVGITPNNITGTGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTAIGIGGDPVIGTTHIDAIEAFEKDPNTKVIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILQSL 300 >gi|118619788|ref|YP_908120.1| succinyl-CoA synthetase subunit alpha [Mycobacterium ulcerans Agy99] gi|118571898|gb|ABL06649.1| succinyl-CoA synthetase (alpha chain) SucD [Mycobacterium ulcerans Agy99] Length = 300 Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 152/307 (49%), Positives = 201/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT----GGNV-N 55 MSI ++K+ KV+VQG+TG T HT + +L TQ+VGG++ +K T T GG V Sbjct: 1 MSIFLNKDNKVIVQGITGSEATVHTAR-MLKAGTQIVGGVNARKAGTTVTHEDKGGRVIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF VAEA E+T A+ S+I+VPP A DAIIE+I+AEIPL+V ITE IPV D A Sbjct: 60 LPVFGGVAEAMEKTGADVSIIFVPPKFAKDAIIEAIDAEIPLLVVITEVIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 L K +R+IGPNCPGI+TP +GI P +I G VG++S+SGTLTY+ +F+ Sbjct: 120 YNLGKGGKTRIIGPNCPGIITPGQALVGITPANITGAGPVGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G +T++GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -FGFTTSIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVQVGKTPSETAVLA 293 Query: 294 VELLGSL 300 E+L L Sbjct: 294 REILKGL 300 >gi|320009000|gb|ADW03850.1| succinyl-CoA synthetase, alpha subunit [Streptomyces flavogriseus ATCC 33331] Length = 294 Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 142/300 (47%), Positives = 199/300 (66%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT + +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGATGMKHT-KLMLADGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 +VAEA E+T A+ SV++VPP+ A A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 SVAEAMEKTGADVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAYAGSK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA ++ + KP Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAADYI----AKNVTKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P + E+LG Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPTETAKLAREILG 293 >gi|289596662|ref|YP_003483358.1| succinyl-CoA synthetase, alpha subunit [Aciduliprofundum boonei T469] gi|289534449|gb|ADD08796.1| succinyl-CoA synthetase, alpha subunit [Aciduliprofundum boonei T469] Length = 288 Score = 251 bits (642), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 134/293 (45%), Positives = 189/293 (64%), Gaps = 10/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+++D+NTK++VQG+TG G+FH+ + I + +VV G+ P KG NVPV+ Sbjct: 1 MSVIIDENTKIIVQGITGHQGSFHSGEMIKFG-AKVVAGVTPGKGGMKVH----NVPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV E A++I VP DA E++ I ++ +TE +P+ D + + Sbjct: 56 TVEETLVH-EPEATMITVPAPFVKDAAFEAMYNGIRVVYILTEKVPLHDALDIVTYARSH 114 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPN PGI P K+GIMP IF+KG+V + SRSGTLTYE V + G GQST Sbjct: 115 GHMVIGPNGPGITVPGKTKMGIMPNHIFKKGTVAVASRSGTLTYEIVNALTLNGYGQSTV 174 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGD + G F+D+LELF DE TE+IV+VGEIGG+AEEEAA+++ K+ KP+V Sbjct: 175 IGLGGDRITGLNFVDILELFEKDEDTEAIVLVGEIGGTAEEEAAEYI----KKNVSKPVV 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 ++AG++APPG+ MGHAGA+I+ GKG AE KI A EAG+ +A P I ++L Sbjct: 231 AYIAGRSAPPGKRMGHAGAIITRGKGTAESKIKAFNEAGVPVAEFPWEIPQAL 283 >gi|85706364|ref|ZP_01037458.1| SucD [Roseovarius sp. 217] gi|85669137|gb|EAQ24004.1| SucD [Roseovarius sp. 217] Length = 299 Score = 251 bits (642), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 139/282 (49%), Positives = 186/282 (65%), Gaps = 8/282 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I V+ T+++VQG+TG++GTF+T++++ Y T VGG+ P KG G +P+F Sbjct: 1 MAIFVNSETRLIVQGMTGRSGTFYTDESMRY-GTTCVGGVRPGKGGARHLG----LPLFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T ANAS++ VP AG A+IE+IEA I +VC+TE +P DM RVK L + Sbjct: 56 TVREAVDATGANASLVIVPAPQAGAAMIEAIEAGIGTVVCVTERVPQHDMSRVKQALAGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPN GILTP+ CKIG+MP + G +GI SRS +LT E + Q S GLGQST Sbjct: 116 DTVLIGPNSQGILTPEQCKIGVMPTGNAKPGHIGIASRSASLTSEILAQCSTAGLGQSTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGD + G F++ L+ F D TE++V++GEIGG AEEEAA +L D G KP+V Sbjct: 176 VGIGGDTLHGVGFVECLKAFRDDPETEAVVLIGEIGGRAEEEAAAYL-DSVDYG--KPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 V G+ AP GR MGHAG + G G A DKI ++ AG+ I Sbjct: 233 ALVVGRHAPRGRRMGHAGTLSVLGGGTAADKIARLRAAGVEI 274 >gi|256370717|ref|YP_003108542.1| succinyl-CoA synthetase subunit alpha [Candidatus Sulcia muelleri SMDSEM] gi|256009509|gb|ACU52869.1| succinyl-CoA synthetase, alpha subunit [Candidatus Sulcia muelleri SMDSEM] Length = 292 Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 150/297 (50%), Positives = 204/297 (68%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K +K++VQG TGK G+FH++Q I Y T ++GG+ P KG + P+F Sbjct: 1 MSILINKFSKIIVQGFTGKEGSFHSQQMIDY-GTPIIGGVTPGKGGKKFL----GKPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TV EA + AN S+I+VPP A DAIIESI++ I +IVCITEGIP DM+++K + K Sbjct: 56 TVEEAVKALNANVSIIFVPPRYAYDAIIESIDSGIKIIVCITEGIPRSDMIKIKNYINLK 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + LIGPNCPGI+TP+ K+GIMPG IF+KG VGI+S+SGTLTYEA Q + G G ST Sbjct: 116 KKTILIGPNCPGIITPNEAKVGIMPGFIFKKGKVGIVSKSGTLTYEAADQIVKSGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDP+ GT ++ FL D T+ IV++GEIGG E +AA+ + +KK Sbjct: 176 AVGIGGDPIIGTTMKYIISEFLNDSETDIIVIIGEIGGKLEIDAAK---FLKLKKKKKIC 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG+TAP GRTMGHAGA+I A K+ MK+ GI + SP++IG +L+++ Sbjct: 233 LSFIAGQTAPKGRTMGHAGAIIGHKNDTAFYKMEIMKKCGIFLVKSPSQIGENLIKI 289 >gi|156314281|ref|XP_001617908.1| hypothetical protein NEMVEDRAFT_v1g156386 [Nematostella vectensis] gi|156196424|gb|EDO25808.1| predicted protein [Nematostella vectensis] Length = 219 Score = 251 bits (641), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 129/222 (58%), Positives = 163/222 (73%), Gaps = 4/222 (1%) Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD 136 +VP D+I+E+ A I LIVCITE IPVLDM+ K + ++ RLIGPNCPG++TP Sbjct: 1 FVPAPFCKDSILEAANAGIKLIVCITEHIPVLDMLECKVKCDELGVRLIGPNCPGVITPG 60 Query: 137 SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST VGIGGDP+ G+ FID+ Sbjct: 61 ECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDI 120 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGH 256 LELF D TE+IVM+GEIGG+AEEEAA ++K KP+V ++AG TAP G+ MGH Sbjct: 121 LELFQNDPQTEAIVMIGEIGGTAEEEAAAYIKANV----TKPVVSYIAGVTAPKGKRMGH 176 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AGA+ISGGKG A++K A+++AG+ S A+IG +L E+ G Sbjct: 177 AGAIISGGKGTADEKFAALEDAGVKTVRSLAQIGDALKEVTG 218 >gi|218296427|ref|ZP_03497170.1| succinyl-CoA synthetase, alpha subunit [Thermus aquaticus Y51MC23] gi|218243221|gb|EED09752.1| succinyl-CoA synthetase, alpha subunit [Thermus aquaticus Y51MC23] Length = 288 Score = 251 bits (641), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 152/281 (54%), Positives = 196/281 (69%), Gaps = 9/281 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ILV++ T+VLVQG+TG+ G FHT+Q + Y T++V G+ P KG T G VPV+ TV Sbjct: 2 ILVNRETRVLVQGITGREGQFHTQQMLAYG-TKIVAGVTPGKGGTEVLG----VPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA + A +AS+I+VP GA DA +E+ A IPLIV ITEGIP LDMV+ + Sbjct: 57 KEAVKNHAIDASIIFVPAPGAADAALEAAHAGIPLIVLITEGIPTLDMVKAVEEIRTLGV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIG NCPGI++ + K+GIMPG +F++G VG++SRSGTLTYEA SQ GLG +T VG Sbjct: 117 RLIGGNCPGIISAEETKLGIMPGHVFKRGRVGLISRSGTLTYEAAAALSQAGLGTTTTVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT F D+L LF D TE++V++GEIGGS EEEAA ++K KKP+VGF Sbjct: 177 IGGDPVIGTTFKDLLPLFNDDPETEAVVLIGEIGGSDEEEAAAWVKAHM----KKPVVGF 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 + G++AP G+ MGHAGA+I G G E K+ A EAGI +A Sbjct: 233 IGGRSAPKGKRMGHAGAIIMGNVGTPESKLKAFAEAGIPVA 273 >gi|288921663|ref|ZP_06415932.1| succinyl-CoA synthetase, alpha subunit [Frankia sp. EUN1f] gi|288346932|gb|EFC81240.1| succinyl-CoA synthetase, alpha subunit [Frankia sp. EUN1f] Length = 290 Score = 251 bits (641), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 138/301 (45%), Positives = 198/301 (65%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +D+N++++VQG+TG G+ HT + +L +VV G++ +K G VPVF Sbjct: 1 MAIWLDENSRIVVQGITGGEGSKHTRR-MLASGAKVVAGVNARKVGQQVEG----VPVFG 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 +VA+A T AN SVI+VPP DA IE+++A IPL V ITEG+PV D A + K Sbjct: 56 SVADAMAETGANVSVIFVPPKFTKDAAIEAVDAAIPLAVVITEGVPVHDTTEFFAYSKSK 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++R+IGPNCPGI +P GI+P I G +G++S+SGTLTY+ +++ + G ST Sbjct: 116 GTTRIIGPNCPGIASPGVSNAGIIPADITPGGRIGLVSKSGTLTYQMMYELRE--FGFST 173 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPV GT ID L+ F AD T++IVM+GEIGG AEE AA ++ KP+ Sbjct: 174 CVGIGGDPVIGTTHIDALDAFQADPGTDAIVMIGEIGGDAEERAAAHIEAHVT----KPV 229 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG+VAG TAP G+TMGHAGA++SG G A+ K A+++AG+ + +P+ R + +++ S Sbjct: 230 VGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEKAGVRVGKTPSETARLMADIMRS 289 Query: 300 L 300 L Sbjct: 290 L 290 >gi|332669628|ref|YP_004452636.1| succinyl-CoA synthetase subunit alpha [Cellulomonas fimi ATCC 484] gi|332338666|gb|AEE45249.1| succinyl-CoA synthetase, alpha subunit [Cellulomonas fimi ATCC 484] Length = 293 Score = 251 bits (641), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 141/297 (47%), Positives = 201/297 (67%), Gaps = 7/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + + +KV+VQG+TG GT HT + +L T VVGG++P+K T + G+V+VPVF Sbjct: 1 MAIFLTEASKVIVQGMTGSEGTKHTTR-MLASGTNVVGGVNPRKAGTTQSFGDVDVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA E+T A+ SVI+VPP+ A++E+++A IPL+V ITEG+PV D + + Sbjct: 60 SVAEAIEKTGADVSVIFVPPAHTKGAVVEAVDAGIPLVVIITEGVPVADTAEFFSYAQAK 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG+++P +GI+P I G VG++S+SGTLTY+ +++ G STA Sbjct: 120 GVRLVGPNCPGLISPGKSNVGIIPADITGPGRVGLVSKSGTLTYQMMYELRD--FGFSTA 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID L F AD TE IVM+GEIGG AEE AA ++++ KP+V Sbjct: 178 IGIGGDPIIGTTHIDALAAFEADPETEVIVMIGEIGGDAEERAAAYIREHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ ELL Sbjct: 234 GYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSETAALARELL 290 >gi|150402129|ref|YP_001329423.1| succinyl-CoA synthetase subunit alpha [Methanococcus maripaludis C7] gi|150033159|gb|ABR65272.1| succinyl-CoA synthetase, alpha subunit [Methanococcus maripaludis C7] Length = 287 Score = 251 bits (641), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 132/295 (44%), Positives = 194/295 (65%), Gaps = 9/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NT+ +VQG+TG G FHT+ +L C T +V G+ P KG G +PV+ TV Sbjct: 2 ILLDENTRAIVQGITGNQGKFHTKN-MLECNTNIVAGVTPGKGGQDVYG----IPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E E+ ANAS+I++P DA E+I+A I L+ ITE IP+ D + + A +K Sbjct: 57 LETVEKYDANASLIFIPAPFVKDAAYEAIDAGIDLVTIITEHIPIQDSMDIVAYGKKHGV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PG+ +P K+GI+P SI ++G++G++SRSGTLTYE Q + GQS+ VG Sbjct: 117 NIIGPNTPGLASPKVGKLGIIPMSILKEGNIGMVSRSGTLTYEIASQLTSSNYGQSSCVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP+ G +I+VLE+F D T+++VMVGEIGG+AEE AA+ + + KKP++ + Sbjct: 177 IGGDPITGLRYIEVLEMFEKDSETDAVVMVGEIGGNAEENAAEKMISK----MKKPVISY 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG++AP G+ MGHAGA+I G G A+ K+ A++ AG +A + I L E++ Sbjct: 233 IAGQSAPEGKRMGHAGAIIEKGVGTAKSKMEALENAGAHVAKRISDIPLLLKEII 287 >gi|227650|prf||1708208A succinyl CoA synthetase Length = 288 Score = 251 bits (641), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 154/283 (54%), Positives = 196/283 (69%), Gaps = 9/283 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ILV++ T+VLVQ +TG+ G FHT+Q + Y T++V G+ P KG T G VPV+ TV Sbjct: 2 ILVNRETRVLVQCITGREGQFHTKQMLDYG-TKIVAGVTPGKGGTEVLG----VPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA +AS+I+VP A DA +E+ A IPLIV ITEGIP LDMVR ++ S Sbjct: 57 KEAVAHHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIG NCPGI++ + KIGIMPG +F++G VGI+SRSGTLTYEA SQ GLG +T VG Sbjct: 117 RLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEAAAALSQAGLGTTTTVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT F D+L LF D TE++V++GEIGGS EEEAA ++KD KKP+VGF Sbjct: 177 IGGDPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKDHM----KKPVVGF 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + G++AP G+ MGHAGA+I G G E K+ A EAGI +A + Sbjct: 233 IGGRSAPKGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADT 275 >gi|41033571|emb|CAF18452.1| succinyl-CoA synthetase alpha subunit [Thermoproteus tenax] Length = 293 Score = 251 bits (641), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 134/299 (44%), Positives = 197/299 (65%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV +TKV+VQG+TGK G+FH ++ + Y T+VVGG+ P KG G VPVF Sbjct: 1 MTVLVGPDTKVIVQGITGKEGSFHAQRMLEYG-TKVVGGVTPGKGGATVAG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA T ANASV++VP A DA+ E+++A I LIV ITE IP+ + +R Sbjct: 56 SVEEAVRATGANASVVFVPAKFAADAVYEAVDAGIKLIVVITEHIPIHETLRFVNYARAR 115 Query: 121 SSRLIGPNCPGILTPD-SCKIGIMPGSIFRK-GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +IGPNCPG++ P K+GIMP S+++ G +G++SRSGTLTYE +Q ++ GLG + Sbjct: 116 GATVIGPNCPGLVAPPLKVKLGIMPNSVYQTPGRIGVVSRSGTLTYEISYQLARAGLGIN 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+G+GGDP+ GT+ ++ L D ++IV +GE+GG AEE A+ + KKP Sbjct: 176 TAIGVGGDPIVGTDLVEAALLMSRDPEVDAIVAIGEVGGDAEERLAKLYAEGVI---KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 IV +VAG+TAPP + MGHAGA++ G G A K+ ++EAGI +A +P + + +++ L Sbjct: 233 IVAYVAGRTAPPEKRMGHAGAIVMLGSGDANSKVKTLREAGIPVADTPVEVPQLVLKAL 291 >gi|261402514|ref|YP_003246738.1| succinyl-CoA synthetase, alpha subunit [Methanocaldococcus vulcanius M7] gi|261369507|gb|ACX72256.1| succinyl-CoA synthetase, alpha subunit [Methanocaldococcus vulcanius M7] Length = 287 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 145/295 (49%), Positives = 206/295 (69%), Gaps = 10/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NT+ +VQG+TGK G+FHT++ +L C T++VGGI P KG G VPVF TV Sbjct: 2 ILLDENTRAVVQGITGKQGSFHTKK-MLECGTKIVGGITPGKGGKDVYG----VPVFDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA ++T ANASVI+VP A DA+ E+++A + LIV ITE IPV D + E Sbjct: 57 KEAVKKTDANASVIFVPAPFAKDAVFEAMDAGLDLIVVITEHIPVHDTMEFVNYAEDLGI 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++IGPN PGI +P K+GI+P + ++G++G++SRSGTLTYE Q G G ST VG Sbjct: 117 KIIGPNTPGIASPKVGKLGIIPMEVLKEGNIGMVSRSGTLTYEIANQIKNAGFGVSTCVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP+ G + ++L+LF D+ TE+IVM+GEIGG AEEEA++F+K KKP++G+ Sbjct: 177 IGGDPIVGLRYGEILDLFEKDKETEAIVMIGEIGGGAEEEASKFIKK-----MKKPVIGY 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG++AP G+ MGHAGA++ G+G AE K+ A++EAG +A + + I + L E+L Sbjct: 232 IAGQSAPEGKRMGHAGAIVEKGRGTAESKMRALEEAGAYVAKNISDIPKILKEIL 286 >gi|271962789|ref|YP_003336985.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Streptosporangium roseum DSM 43021] gi|270505964|gb|ACZ84242.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Streptosporangium roseum DSM 43021] Length = 291 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 135/299 (45%), Positives = 197/299 (65%), Gaps = 13/299 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + +N+K++VQG+TG GT HT + +L +VVGG++ +K T G +PVF Sbjct: 1 MAIWLTENSKIIVQGMTGGEGTKHTRR-MLASGARVVGGVNARKAGTTHEG----LPVFG 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TV EA + T A+ SV++VPP+ DA+ E+I+AEIPL V ITEG+P+ D A + Sbjct: 56 TVVEAIKETGADVSVVFVPPAFTKDAVKEAIDAEIPLCVVITEGVPIHDTTEFWAYAVAK 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI +P + GI+P I G +G++S+SGTLTY+ +++ G S Sbjct: 116 GNKTRIIGPNCPGIASPGASNAGIIPADITTAGRIGLVSKSGTLTYQLMYELRD--FGFS 173 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV GT ID L+ F D T++IVM+GEIGG AEE AA +++ KP Sbjct: 174 TAVGIGGDPVIGTTHIDALQAFQDDPGTDAIVMIGEIGGDAEERAAAYIEQHV----TKP 229 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +V +VAG TAP G+TMGHAGA++SG G A+ K A+++ G+ + +P+ R + E++ Sbjct: 230 VVAYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEKVGVRVGKTPSETARLMREVM 288 >gi|283457347|ref|YP_003361923.1| succinyl-CoA synthetase subunit alpha [Rothia mucilaginosa DY-18] gi|283133338|dbj|BAI64103.1| succinyl-CoA synthetase, alpha subunit [Rothia mucilaginosa DY-18] Length = 305 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 144/311 (46%), Positives = 213/311 (68%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI V+K++KV+VQG+TG GT HT + +L T +VGG++ +K T T G ++ Sbjct: 1 MSIFVNKDSKVIVQGITGGEGTKHTAR-MLAAGTNIVGGVNARKAGTTVTHKAKDGSDIE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR--- 112 + VF +VAEA E+T AN S+++VPP+ A++E+IEA+I L+V ITEG+PV D Sbjct: 60 LNVFGSVAEAMEKTGANVSIVFVPPAFTKAAVLEAIEAKIGLVVVITEGVPVQDSAEFWA 119 Query: 113 -VKARLE---KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 KA ++ K +R+IGPNCPGI++P+ C +GI+P +I KG +G++S+SGTLTY+ ++ Sbjct: 120 AAKASVDENGKQITRIIGPNCPGIISPEECLVGIIPANITGKGKIGLVSKSGTLTYQLMY 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G +TA+GIGGDP+ GT ID LE F AD TE+IVM+GEIGG AEE AA+++K Sbjct: 180 ELSD--IGFTTAIGIGGDPIIGTTHIDALEAFEADPETEAIVMIGEIGGDAEERAAEYIK 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 KP+VG++AG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 238 ANV----TKPVVGYIAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSE 293 Query: 289 IGRSLVELLGS 299 + E+ + Sbjct: 294 AANLMREIFAA 304 >gi|269218839|ref|ZP_06162693.1| succinyl-CoA synthetase subunit alpha [Actinomyces sp. oral taxon 848 str. F0332] gi|269211950|gb|EEZ78290.1| succinyl-CoA synthetase subunit alpha [Actinomyces sp. oral taxon 848 str. F0332] Length = 306 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 143/312 (45%), Positives = 199/312 (63%), Gaps = 21/312 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK--------------GS 46 MSI +D+N+KV+VQG+TG G HT + +L T VVGG++P+K G+ Sbjct: 1 MSIFLDRNSKVIVQGMTGSEGRKHTRR-MLGAGTNVVGGVNPRKAGASVEFDVAPIGPGA 59 Query: 47 TYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G V+VPVF +VAEAKE T AN SV++VPP+ A+IE+++A + L+V ITEG+P Sbjct: 60 EEREAGAVSVPVFGSVAEAKEATGANVSVVFVPPAHTLGAVIEAVDAGLDLVVVITEGVP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D A + RLIGPNCPGI++P +GI P I G VG++S+SGTLTY+ Sbjct: 120 VKDATEFYAYAAERGVRLIGPNCPGIISPGQSNVGITPPDITGPGRVGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ + LG +T +GIGGDPV GT ID ++ F AD TE IVM+GEIGG AEE AA + Sbjct: 180 MYELAD--LGFTTCIGIGGDPVIGTTHIDAIKAFEADPDTELIVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 + + KP+V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 ISEHV----TKPVVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTP 293 Query: 287 ARIGRSLVELLG 298 ++ E+LG Sbjct: 294 SQTAAIAREILG 305 >gi|257068099|ref|YP_003154354.1| succinyl-CoA synthetase subunit alpha [Brachybacterium faecium DSM 4810] gi|256558917|gb|ACU84764.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Brachybacterium faecium DSM 4810] Length = 296 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 142/299 (47%), Positives = 199/299 (66%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVF 59 MSI +D+N+KV+VQG+TG G H+ Q +L T +VGG++P+K G T G VPV+ Sbjct: 1 MSIFLDENSKVIVQGMTGSEGMKHS-QRMLDSGTNIVGGVNPRKAGQTVSFEGGAEVPVY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE- 118 TVAEA T AN SV++VPP A A +E+I+A I L+V ITEGIPV D + Sbjct: 60 GTVAEAMAATGANVSVVFVPPKFAKAAALEAIDAAIELLVIITEGIPVKDSAEFFTYSQA 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 K ++R+IGPNCPG+++P GI P +I G++G++S+SGTLTY+ +++ + +G + Sbjct: 120 KGTTRIIGPNCPGLISPGKSNAGITPSNITGAGTLGLVSKSGTLTYQMMYELAD--IGFT 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDPV GT ID LE F D T IVM+GEIGG AEE AA+++KD KP Sbjct: 178 TAIGIGGDPVIGTTHIDALEAFENDPETAGIVMIGEIGGDAEERAAEYIKDNV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P + E++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPTETADLMREII 292 >gi|298528735|ref|ZP_07016139.1| succinyl-CoA synthetase, alpha subunit [Desulfonatronospira thiodismutans ASO3-1] gi|298512387|gb|EFI36289.1| succinyl-CoA synthetase, alpha subunit [Desulfonatronospira thiodismutans ASO3-1] Length = 692 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 135/285 (47%), Positives = 187/285 (65%), Gaps = 8/285 (2%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 ++KNT VLVQG+TG+ G H + + T++V G+ P KG ++ G VPVF +V + Sbjct: 408 LNKNTPVLVQGITGREGMLHAREMQNFG-TRIVAGVTPFKGGSHVEG----VPVFDSVHK 462 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 A ASVI+VP + A DA++E+++ IP +VCITEGIP DM+R+ + +S +RL Sbjct: 463 ACMEHDIQASVIFVPGAAAADAVMEAVDMHIPWVVCITEGIPQQDMMRLLPAIRRSGTRL 522 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPN PGI+ P K+GIMP SIF +G V ILSRSGTLTYE V + G+GQ +G+G Sbjct: 523 VGPNTPGIMVPGQTKLGIMPASIFSRGPVAILSRSGTLTYECVQSLTSAGMGQCMCLGVG 582 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 GDP G +F D+ L D A +++++GEIGG+AEE+ A+ L DE G KP++GFVA Sbjct: 583 GDPYVGLDFRDIFPLLQRDPACRAVLVLGEIGGTAEEDLAREL-DEM--GFDKPVLGFVA 639 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G+TAPPG+ +GHAGA++ GG K+ M E GI I P A I Sbjct: 640 GQTAPPGKRLGHAGAILDEHSGGIRAKLQVMHECGITICPDLASI 684 >gi|45358518|ref|NP_988075.1| succinyl-CoA synthetase subunit alpha [Methanococcus maripaludis S2] gi|44921276|emb|CAF30511.1| succinate--CoA ligase (ADP-forming); alpha subunit [Methanococcus maripaludis S2] Length = 288 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 133/297 (44%), Positives = 197/297 (66%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M IL+D+NT+ +VQG+TG G FHT+ +L C+T ++ G+ P KG G VPV+ Sbjct: 1 MLILLDENTRAIVQGITGNQGRFHTKN-MLECKTNLLAGVTPGKGGQDVYG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV E E+ ANAS+I++P DA E+I+A + L+ ITE IP+ D + + A +K Sbjct: 56 TVLETVEKYDANASLIFIPAPFVKDAAYEAIDAGVELVTIITEHIPIQDSMDIVAYGKKH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPN PG+ +P K+GI+P SI ++G++G++SRSGTLTYE Q + GQS+ Sbjct: 116 GVNIIGPNTPGLASPKVGKLGIIPMSILKEGNIGMVSRSGTLTYEIASQLTLSNYGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV G +I+VLE+F D T+++VMVGEIGG+AEE+AA+ + + KKP++ Sbjct: 176 VGIGGDPVTGLRYIEVLEMFENDPETDAVVMVGEIGGNAEEDAAKKMISK----MKKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG++AP G+ MGHAGA+I G G A+ K+ A++ AG +A + I L E++ Sbjct: 232 SYIAGQSAPEGKRMGHAGAIIEKGVGTAKSKMQALENAGAHVAKRISDIPLLLKEII 288 >gi|84497954|ref|ZP_00996751.1| succinyl-CoA synthetase alpha subunit [Janibacter sp. HTCC2649] gi|84381454|gb|EAP97337.1| succinyl-CoA synthetase alpha subunit [Janibacter sp. HTCC2649] Length = 293 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 139/300 (46%), Positives = 203/300 (67%), Gaps = 7/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++ ++KV+VQG+TG G HT +L T VVGG++PKK T ++PVF Sbjct: 1 MAIFLNADSKVIVQGMTGAVGMKHT-TLMLADGTAVVGGVNPKKAGTSVDFDGTDIPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E T AN SV++VPP+ A++E+I+AEIPL+V ITEG+PV D Sbjct: 60 SVKEAMEATGANVSVVFVPPAFTKSAVVEAIDAEIPLVVVITEGVPVKDSAEFFNYSLGK 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++R+IGPNCPG+++P +GI+PG I G +G++S+SGTLTY+ +++ + G STA Sbjct: 120 ATRIIGPNCPGLISPGKSNVGIIPGDIAGPGRIGLVSKSGTLTYQMMYELRE--FGFSTA 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID LE F AD+ T++IVM+GEIGG AEE AA ++++ KP+V Sbjct: 178 IGIGGDPIIGTTHIDALEAFQADDETDAIVMIGEIGGDAEERAAAYIQEHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 G+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + E++ SL Sbjct: 234 GYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSETAELMREIMRSL 293 >gi|123393950|ref|XP_001300482.1| adhesin protein AP33-1 [Trichomonas vaginalis G3] gi|2290206|gb|AAC48337.1| adhesin protein AP33-1 [Trichomonas vaginalis] gi|121881529|gb|EAX87552.1| adhesin protein AP33-1 [Trichomonas vaginalis G3] Length = 309 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 147/294 (50%), Positives = 207/294 (70%), Gaps = 8/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DK+TKV++QG+ G G FH+ Y T+VVG +HPKK T G +P+F + Sbjct: 15 LFIDKDTKVVIQGI-GNQGQFHSRLMRQYG-TKVVGAVHPKKAGTIIAG----LPIFKNM 68 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E +RT ANAS+I+VP GA A IE+ EA + L+VCITE IP DM++VK ++++ Sbjct: 69 KEVVKRTDANASLIFVPAPGAAAACIEAAEAGMGLVVCITEHIPQHDMIKVKKVMKETGC 128 Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +LIGPNCPG++ P + K+GI+P +IF G +GI+SRSGTLTYEA + T+ GLGQST V Sbjct: 129 QLIGPNCPGLIQPGTHTKLGIIPTNIFNNGKIGIVSRSGTLTYEAAYATTLAGLGQSTVV 188 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP G DV++ F AD TE I+++GEIGG++EE+AA+++ + K ++KP+V Sbjct: 189 GIGGDPFAGQLHTDVVKRFAADPQTEGIILIGEIGGTSEEDAAEWIA-KTKLTQEKPVVA 247 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPG+ MGHAGA++SGGKG AE K A++ AG+ IA P +G+ + E Sbjct: 248 FIAGATAPPGKRMGHAGAIVSGGKGTAEGKYKALEAAGVRIARHPGNMGKFIFE 301 >gi|46580542|ref|YP_011350.1| succinyl-CoA synthase, beta/subunit alphas [Desulfovibrio vulgaris str. Hildenborough] gi|46449961|gb|AAS96610.1| succinyl-CoA synthase, beta/alpha subunits [Desulfovibrio vulgaris str. Hildenborough] Length = 709 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 127/292 (43%), Positives = 190/292 (65%), Gaps = 8/292 (2%) Query: 7 KNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 K +VLVQG+TG++ HT + Y T +V G+ P KG G VPV+ +V EA Sbjct: 426 KGARVLVQGITGRSAQLHTRLMLDY-GTNIVAGVTPFKGGQVTQG----VPVYDSVHEAC 480 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + +A++++VP + A D+++E++ IP VCITEGIP DM+R + +R+IG Sbjct: 481 RQHDIDATILFVPAAFAADSLLEAVAEGIPWAVCITEGIPQKDMLRALRVARGARTRIIG 540 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN PGI+ P +CK+GIMPG++F G + + SRSGTLTYEA + S G+GQS G+GGD Sbjct: 541 PNTPGIIVPGACKVGIMPGNVFSPGPLAVFSRSGTLTYEAAARLSAAGIGQSLCAGVGGD 600 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P G++F+ + EL DEAT+ ++++GE+GG+AEEE A ++++ A KP+V FVAG+ Sbjct: 601 PYIGSDFVSLCELVRDDEATQGVLVLGEVGGTAEEELAAWVRETAF---PKPVVSFVAGR 657 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 TAPPGR +GHAGA++ GG K+ A+ +AGI + P + ++ + LG Sbjct: 658 TAPPGRRLGHAGAILDEADGGIAGKVRALCDAGIAVCPDLGSLPAAVRQALG 709 >gi|254436023|ref|ZP_05049530.1| CoA binding domain protein [Nitrosococcus oceani AFC27] gi|207089134|gb|EDZ66406.1| CoA binding domain protein [Nitrosococcus oceani AFC27] Length = 222 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 126/200 (63%), Positives = 154/200 (77%), Gaps = 5/200 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDK T+V+ QG TGK GTFH+ QA+ Y TQ+VGG+ P KG ++ PVF Sbjct: 1 MSILVDKQTRVICQGFTGKQGTFHSRQALEY-GTQLVGGVTPGKGGQT----HLGQPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E T ANA++IYVP + A DAI+E+ + +PLIVCITEGIPVLDM+RVKA L Sbjct: 56 TVAEAVEATGANATMIYVPAAFAADAILEAADGGVPLIVCITEGIPVLDMLRVKAALAGL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S L+GPNCPGI+TP +CKIGIMPG I + G +GI+SRSGTLTYEAV+QTS++GLGQST Sbjct: 116 PSYLVGPNCPGIITPGACKIGIMPGDIHQAGRIGIVSRSGTLTYEAVYQTSRKGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELF 200 VGIGGDP++G F+D L L Sbjct: 176 VGIGGDPIQGMSFVDCLTLL 195 >gi|159045033|ref|YP_001533827.1| succinyl-CoA synthetase subunit alpha [Dinoroseobacter shibae DFL 12] gi|157912793|gb|ABV94226.1| ADP-forming succinyl-CoA ligase [Dinoroseobacter shibae DFL 12] Length = 299 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 140/301 (46%), Positives = 201/301 (66%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I++ ++T+V+VQGL+G+ G FH ++ I Y T+VV G+ P KG T +N PVF Sbjct: 1 MAIVITEDTRVVVQGLSGRIGQFHAQEMIEYG-TKVVAGVTPGKGGTTV----LNRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E T A AS+++VPP+GA DA++E+ +A I VC+T+GIP DM+RVK L + Sbjct: 56 TVREAVEATGAEASLLFVPPAGAADAMMEAADAGIRTAVCVTDGIPAQDMMRVKRFLRRF 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 RLIGPNC GI++P +GIMP I+ G VGI+ RSGTL YEA Q G+G Sbjct: 116 PRERKMRLIGPNCAGIISPGKGFMGIMPPHIYTPGRVGIVGRSGTLGYEAASQMQALGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+++GIGGDP+ G+ F D+LELF AD T++++M+GEIGG E EAA +++D Sbjct: 176 VSSSIGIGGDPINGSSFKDILELFEADPETDAVIMIGEIGGPQEAEAAAYVRDHM----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+ ++AG AP GR MGHAGA+IS A++K+ + GI +AP+P+ +G ++ + Sbjct: 232 KPVAAYIAGLAAPKGRQMGHAGAIISAFGESAQEKVALLSACGIEVAPNPSAMGETVARI 291 Query: 297 L 297 L Sbjct: 292 L 292 >gi|120602142|ref|YP_966542.1| succinyl-CoA synthetase, subunit alpha [Desulfovibrio vulgaris DP4] gi|120562371|gb|ABM28115.1| succinyl-CoA synthetase (ADP-forming) beta subunit / succinyl-CoA synthetase (ADP-forming) alpha subunit [Desulfovibrio vulgaris DP4] Length = 691 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 128/291 (43%), Positives = 190/291 (65%), Gaps = 12/291 (4%) Query: 7 KNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 K +VLVQG+TG++ HT + Y T +V G+ P KG G VPV+ +V EA Sbjct: 408 KGARVLVQGITGRSAQLHTRLMLDY-GTNIVAGVTPFKGGQVTQG----VPVYDSVHEAC 462 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + +A++++VP + A D+++E++ IP VCITEGIP DM+R + +R+IG Sbjct: 463 RQHDIDATILFVPAAFAADSLLEAVAEGIPWAVCITEGIPQKDMLRALRVARGARTRIIG 522 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN PGI+ P +CK+GIMPG++F G + + SRSGTLTYEA + S G+GQS G+GGD Sbjct: 523 PNTPGIIVPGACKVGIMPGNVFSPGPLAVFSRSGTLTYEAAARLSAAGIGQSLCAGVGGD 582 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P G++F+ + EL DEAT+ ++++GE+GG+AEEE A ++++ A KP+V FVAG+ Sbjct: 583 PYIGSDFVSLCELVRDDEATQGVLVLGEVGGTAEEELAAWVRETAF---PKPVVSFVAGR 639 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS----PARIGRSL 293 TAPPGR +GHAGA++ GG K+ A+ +AGI + P PA + ++L Sbjct: 640 TAPPGRRLGHAGAILDEADGGIAGKVRALCDAGIAVCPDLGSLPAAVRQAL 690 >gi|311234280|gb|ADP87134.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio vulgaris RCH1] Length = 691 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 127/292 (43%), Positives = 190/292 (65%), Gaps = 8/292 (2%) Query: 7 KNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 K +VLVQG+TG++ HT + Y T +V G+ P KG G VPV+ +V EA Sbjct: 408 KGARVLVQGITGRSAQLHTRLMLDY-GTNIVAGVTPFKGGQVTQG----VPVYDSVHEAC 462 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + +A++++VP + A D+++E++ IP VCITEGIP DM+R + +R+IG Sbjct: 463 RQHDIDATILFVPAAFAADSLLEAVAEGIPWAVCITEGIPQKDMLRALRVARGARTRIIG 522 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN PGI+ P +CK+GIMPG++F G + + SRSGTLTYEA + S G+GQS G+GGD Sbjct: 523 PNTPGIIVPGACKVGIMPGNVFSPGPLAVFSRSGTLTYEAAARLSAAGIGQSLCAGVGGD 582 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P G++F+ + EL DEAT+ ++++GE+GG+AEEE A ++++ A KP+V FVAG+ Sbjct: 583 PYIGSDFVSLCELVRDDEATQGVLVLGEVGGTAEEELAAWVRETAF---PKPVVSFVAGR 639 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 TAPPGR +GHAGA++ GG K+ A+ +AGI + P + ++ + LG Sbjct: 640 TAPPGRRLGHAGAILDEADGGIAGKVRALCDAGIAVCPDLGSLPAAVRQALG 691 >gi|159906082|ref|YP_001549744.1| succinyl-CoA synthetase subunit alpha [Methanococcus maripaludis C6] gi|159887575|gb|ABX02512.1| succinyl-CoA synthetase, alpha subunit [Methanococcus maripaludis C6] Length = 287 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 133/295 (45%), Positives = 193/295 (65%), Gaps = 9/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NT+ +VQG+TG G FHT+ I C T +V G+ P K G VPV+ TV Sbjct: 2 ILLDENTRAIVQGITGNQGRFHTKNMI-ECNTNIVAGVTPGKAGQDVYG----VPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E E+ ANAS+I++P DA E+I+A + L+ ITE IP+ D + + A +K Sbjct: 57 LETVEKYDANASLIFIPAPFVKDAAYEAIDAGVDLVTIITEHIPIQDSMDIVAYGKKHGV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PG+ +P K+GI+P SI ++G++G++SRSGTLTYE Q + GQST VG Sbjct: 117 NIIGPNTPGLASPKVGKLGIIPMSILKEGNIGMVSRSGTLTYEIASQLTSSNYGQSTCVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV G +I+VLE+F D T+++VMVGEIGG+AEE+AA+ + + KKP++ + Sbjct: 177 IGGDPVTGLRYIEVLEMFEKDTETDAVVMVGEIGGNAEEDAAEKMISK----MKKPVISY 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG++AP G+ MGHAGA+I G G A+ K+ A++ AG +A + I L E++ Sbjct: 233 IAGQSAPEGKRMGHAGAIIEKGVGTAKSKMEALENAGAHVAKRISDIPLLLKEII 287 >gi|170782915|ref|YP_001711249.1| succinyl-CoA synthetase subunit alpha [Clavibacter michiganensis subsp. sepedonicus] gi|169157485|emb|CAQ02675.1| succinyl CoA synthetase alpha chain [Clavibacter michiganensis subsp. sepedonicus] Length = 295 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 143/302 (47%), Positives = 204/302 (67%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+N+K++VQGLTG GT H + +L ++VVGG++P+K + T V +P+F Sbjct: 1 MSILLDENSKIIVQGLTGSEGTKHAGR-MLASGSKVVGGVNPRKAGSTVTIEGVELPIFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA T A+ SVI+VPP+ A A++E+I+A IPL V ITEGIPV D + + + Sbjct: 60 SVAEAMTETGADVSVIFVPPAFAKSAVVEAIDAAIPLAVVITEGIPVKDSAEFWSHAKST 119 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R++GPNCPGI++P GI+P +I G +G++S+SGTLTY+ +F+ LG S Sbjct: 120 GGKTRIVGPNCPGIISPGKSNAGIIPATITEAGPIGLVSKSGTLTYQMMFELRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID LE F AD T +IVM+GEIGG AEE AA+++K KP Sbjct: 178 TAIGIGGDPIIGTTHIDALEAFEADPETRAIVMIGEIGGDAEERAAEYIKAHV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SGG G A+ K A++ +G+ + +P L E+ Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGGSGTAQGKKEALEASGVKVGKTPTETANLLREVFA 293 Query: 299 SL 300 +L Sbjct: 294 AL 295 >gi|159039721|ref|YP_001538974.1| succinyl-CoA synthetase subunit alpha [Salinispora arenicola CNS-205] gi|157918556|gb|ABV99983.1| succinyl-CoA synthetase, alpha subunit [Salinispora arenicola CNS-205] Length = 295 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 135/288 (46%), Positives = 189/288 (65%), Gaps = 9/288 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G+ HT + +L T +VGG++P+K T +PVF Sbjct: 1 MAIWLTKDSKVIVQGMTGSEGSKHTRR-MLAAGTDIVGGVNPRKAGTTVDFDGAQLPVFA 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 +VA+A T A+ +VI+VPP A+IE+I+A I L V ITEG+PV D A + Sbjct: 60 SVADAMRETGADVTVIFVPPQFTKGAVIEAIDAGISLAVVITEGVPVHDTAAFWAYNVAQ 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPGI++P + GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GERTRIIGPNCPGIVSPGAANAGIIPADITGTGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV GT ID L F D T++IVM+GEIGG AEE AA+F+K KP Sbjct: 178 TCVGIGGDPVIGTTHIDALAAFEDDPDTDAIVMIGEIGGDAEERAAEFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +VG++AG TAPPG+TMGHAGA+ISG G AE K A++ G+ + +P Sbjct: 234 VVGYIAGFTAPPGKTMGHAGAIISGSAGTAEAKKTALEAVGVKVGKTP 281 >gi|114330620|ref|YP_746842.1| succinyl-CoA synthetase subunit alpha [Nitrosomonas eutropha C91] gi|114307634|gb|ABI58877.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nitrosomonas eutropha C91] Length = 295 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 136/304 (44%), Positives = 196/304 (64%), Gaps = 13/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+++ T+++VQG TG+ GTFH ++ I Y + VVGG+ P KG G +PVF Sbjct: 1 MAILINERTRIIVQGFTGRIGTFHAQEMIDYG-SNVVGGVTPGKGGQKHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA--RLE 118 TV EA E+ A AS+++VPP+ A D+I+E+ +A I V IT+GIP DM+ VK RL Sbjct: 56 TVREAVEQAGAEASIVFVPPAFAADSIMEAADAGIKYCVSITDGIPTQDMMTVKNFLRLF 115 Query: 119 KSSSRLI--GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 +R++ GPNC G ++P +GIMPG I+ +G VG++ RSGTL YEA Q + +G Sbjct: 116 PKQNRMVLSGPNCSGTISPGRSMLGIMPGHIYSQGIVGVVGRSGTLGYEAADQMRRLNIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ D+LE D T+ +M+GEIGG E EA F AK + Sbjct: 176 ISTSVGIGGDPIIGSSHRDILEKLEEDPETKIALMIGEIGGPMEVEAGLF----AKENMR 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V ++AG TAP GR MGHAGA+IS A +K+ ++E G+ I P+P+ +G ++ ++ Sbjct: 232 KPLVAYIAGLTAPSGRRMGHAGAIISSTGESAAEKVEQLQELGVTICPTPSMMGETVAKV 291 Query: 297 LGSL 300 L L Sbjct: 292 LAGL 295 >gi|123501690|ref|XP_001328129.1| hypothetical protein [Trichomonas vaginalis G3] gi|1710867|sp|P53401|SUCA3_TRIVA RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha-3, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha-3; Short=SCS-alpha-3; Flags: Precursor gi|538513|gb|AAC41560.1| succinyl CoA synthetase-3 alpha subunit [Trichomonas vaginalis] gi|121911068|gb|EAY15906.1| hypothetical protein TVAG_165340 [Trichomonas vaginalis G3] Length = 309 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 145/294 (49%), Positives = 207/294 (70%), Gaps = 8/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DK+TKV++QG+ G G FH+ Y T+VVG +HPKK + G +P+F + Sbjct: 15 LFIDKDTKVVIQGI-GNQGQFHSRLMRQYG-TKVVGAVHPKKAGSIIAG----LPIFKNM 68 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E +RT ANAS+I+VP GA A IE+ +A + L+VCITE IP DM++VK ++++ Sbjct: 69 KEVVKRTDANASLIFVPAPGAAAACIEAAQAGMGLVVCITEHIPQHDMIKVKKVMKETGC 128 Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +LIGPNCPG++ P + K+GI+P +IF G +GI+SRSGTLTYEA + T+ GLGQST V Sbjct: 129 QLIGPNCPGLIQPGTHTKLGIIPTNIFNNGKIGIVSRSGTLTYEAAYATTLAGLGQSTVV 188 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP G DV++ F AD TE I+++GEIGG++EE+AA+++ + K ++KP+V Sbjct: 189 GIGGDPFAGQLHTDVVKRFAADPQTEGIILIGEIGGTSEEDAAEWIA-KTKLTQEKPVVA 247 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPG+ MGHAGA++SGGKG AE K A++ AG+ IA P +G+ + E Sbjct: 248 FIAGATAPPGKRMGHAGAIVSGGKGTAEGKYKALEAAGVRIARHPGNMGKFIFE 301 >gi|72162975|ref|YP_290632.1| succinyl-CoA synthetase subunit alpha [Thermobifida fusca YX] gi|71916707|gb|AAZ56609.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Thermobifida fusca YX] Length = 292 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 141/298 (47%), Positives = 196/298 (65%), Gaps = 12/298 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KVLVQG+TG GT HT + +L T +VGG++P+K VPVF Sbjct: 1 MAIFLTKDSKVLVQGMTGSEGTKHTRR-MLAAGTNIVGGVNPRKAGQVVDFDGTQVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 +VAE + T A+ +VI+VPP A DA+IE+I+AEI L V ITEGIPV D A + Sbjct: 60 SVAEGMKATGADVTVIFVPPKFAKDAVIEAIDAEIGLAVVITEGIPVHDTATFWAHACSK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPADITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA+++K KP Sbjct: 178 TCVGIGGDPIIGTTHIDALAAFEADPDTDVIVMIGEIGGDAEERAAEYIKKHV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP---ARIGRSL 293 +VG++AG TAP G+TMGHAGA++SG G A K A++ G+ + +P A++ RSL Sbjct: 234 VVGYIAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVKVGKTPSEAAKLVRSL 291 >gi|296268641|ref|YP_003651273.1| succinyl-CoA synthetase subunit alpha [Thermobispora bispora DSM 43833] gi|296091428|gb|ADG87380.1| succinyl-CoA synthetase, alpha subunit [Thermobispora bispora DSM 43833] Length = 291 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 137/301 (45%), Positives = 196/301 (65%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + +N+K++VQG+TG GT HT + +L +VVGG++ +K G +PVF Sbjct: 1 MAIWLTENSKIIVQGMTGSEGTKHTRR-MLAAGAKVVGGVNARKAGIIHEG----LPVFG 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TV EA T A+ SV++VPP+ A++E+I+AEIPL V ITEG+PV D A + Sbjct: 56 TVKEAMAETGADVSVVFVPPAATKAAVMEAIDAEIPLCVVITEGVPVHDTTEFWAYAVSK 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI +P GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 116 GNKTRIIGPNCPGIASPGKSNAGIIPADITNPGPIGLVSKSGTLTYQLMYELRD--IGFS 173 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV GT ID L+ F D TE+IV++GEIGG AEE AA F++ KP Sbjct: 174 TCVGIGGDPVIGTTHIDALKAFQEDPETEAIVLIGEIGGDAEERAAAFIEKHV----TKP 229 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA+ISG G A+ K A+++ G+ + +P+ R + E++ Sbjct: 230 VVGYVAGFTAPEGKTMGHAGAIISGSSGTAQAKKEALEKVGVRVGRTPSETARIIREIIK 289 Query: 299 S 299 S Sbjct: 290 S 290 >gi|320449884|ref|YP_004201980.1| succinate-CoA ligase, alpha subunit subfamily [Thermus scotoductus SA-01] gi|320150053|gb|ADW21431.1| succinate-CoA ligase, alpha subunit subfamily [Thermus scotoductus SA-01] Length = 288 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 151/281 (53%), Positives = 196/281 (69%), Gaps = 9/281 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+++ T+VLVQG+TG+ G FHT Q + Y T+VV G+ P KG + G +PV+ TV Sbjct: 2 ILINRETRVLVQGITGREGQFHTRQMLEYG-TKVVAGVTPGKGGSEVLG----LPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA A +AS+I+VP A DA +E+ A IPLIV ITEGIP LDMV+ ++ S Sbjct: 57 KEAVAHHAIDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVKAVEEIKALGS 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIG NCPGI++ + KIGIMPG +F++G VG++SRSGTLTYEA SQ GLG +T VG Sbjct: 117 RLIGGNCPGIISAEESKIGIMPGHVFKRGKVGLISRSGTLTYEAAAALSQAGLGTTTTVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT F D+L LF D TE++V++GEIGGS EEEAA ++K+ KKP+VGF Sbjct: 177 IGGDPVIGTTFKDLLPLFNQDPETEAVVLIGEIGGSDEEEAAAWIKENM----KKPVVGF 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 + G++AP G+ MGHAGA+I G G E K+ A EAGI +A Sbjct: 233 IGGRSAPKGKRMGHAGAIIMGNVGTPESKLKAFAEAGIPVA 273 >gi|255326667|ref|ZP_05367743.1| succinate-CoA ligase, alpha subunit [Rothia mucilaginosa ATCC 25296] gi|255295884|gb|EET75225.1| succinate-CoA ligase, alpha subunit [Rothia mucilaginosa ATCC 25296] Length = 305 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 143/311 (45%), Positives = 213/311 (68%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI V+K++KV+VQG+TG GT HT + +L T +VGG++ +K T T G ++ Sbjct: 1 MSIFVNKDSKVIVQGITGGEGTKHTAR-MLAAGTNIVGGVNARKAGTTVTHKAKDGSDIE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR--- 112 + V+ +VAEA E+T AN S+++VPP+ A++E+IEA+I L+V ITEG+PV D Sbjct: 60 LNVYGSVAEAMEKTGANVSIVFVPPAFTKAAVLEAIEAKIGLVVVITEGVPVQDSAEFWA 119 Query: 113 -VKARLE---KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 KA ++ K +R+IGPNCPGI++P+ C +GI+P +I KG +G++S+SGTLTY+ ++ Sbjct: 120 AAKASVDENGKQITRIIGPNCPGIISPEECLVGIIPANITGKGKIGLVSKSGTLTYQLMY 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G +TA+GIGGDP+ GT ID LE F AD TE+IVM+GEIGG AEE AA+++K Sbjct: 180 ELSD--IGFTTAIGIGGDPIIGTTHIDALEAFEADPETEAIVMIGEIGGDAEERAAEYIK 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 KP+VG++AG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 238 ANV----TKPVVGYIAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSE 293 Query: 289 IGRSLVELLGS 299 + E+ + Sbjct: 294 AANLMREIFAA 304 >gi|297559045|ref|YP_003678019.1| succinyl-CoA synthetase, subunit alpha [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843493|gb|ADH65513.1| succinyl-CoA synthetase, alpha subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 292 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 139/298 (46%), Positives = 198/298 (66%), Gaps = 12/298 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++K++KVLVQG+TG GT HT + +L T +VGG++P+K VPVF Sbjct: 1 MAIFLNKDSKVLVQGMTGSEGTKHTRR-MLASGTTIVGGVNPRKAGQKVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM--VRVKARLE 118 +VAE T A+ +VI+VPP + +A+ E+I+AEI L V ITEGIPV D A+ + Sbjct: 60 SVAEGMAATGADVTVIFVPPKFSREAVFEAIDAEIGLAVVITEGIPVHDTAAFWAHAQAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPSDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA+F++D KP Sbjct: 178 SAVGIGGDPIIGTTHIDALAAFEADPDTDVIVMIGEIGGDAEERAAEFIRDNV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP---ARIGRSL 293 +VG+VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P A++ R+L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVKVGKTPSETAQLARAL 291 >gi|312142574|ref|YP_003994020.1| succinyl-CoA synthetase, alpha subunit [Halanaerobium sp. 'sapolanicus'] gi|311903225|gb|ADQ13666.1| succinyl-CoA synthetase, alpha subunit [Halanaerobium sp. 'sapolanicus'] Length = 289 Score = 249 bits (636), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 139/298 (46%), Positives = 189/298 (63%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD NT+++VQG+TG+ G FH EQ + Y T VV G+ P KG G VPV+ Sbjct: 1 MSILVDDNTRLIVQGITGREGKFHAEQMLEYG-TNVVAGVTPGKGGQEVLG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+ ANA+V++VPP + E+++A + L++ I EG+PV DM+ V +K Sbjct: 56 TVAEAVEKHDANATVLFVPPRFTKEGAFEAMDAGLKLVITIAEGVPVHDMLEVYHHSKKY 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + +IGPN G+++P K G M IF G V +LSRS T YE VF S G+GQSTA Sbjct: 116 GATVIGPNSFGVISPGKSKAGFMAHRIFSPGKVAVLSRSATNCYETVFMMSNRGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGD + G+ F+++L L D TE IV++GEIGGS EE AA+++K+ KP+V Sbjct: 176 IGIGGDMIPGSPFVEMLPLLEEDPDTEVIVLIGEIGGSDEEIAAEYIKENV----SKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVIS-GGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AGK AP +MGHAGA+++ G G AE+K +KEAG IA S I L E+L Sbjct: 232 ALIAGKNAPKDTSMGHAGAIVAPDGTGSAENKEKVLKEAGAYIAESTEGIVDILEEIL 289 >gi|310793505|gb|EFQ28966.1| succinate-CoA ligase [Glomerella graminicola M1.001] Length = 329 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 140/298 (46%), Positives = 197/298 (66%), Gaps = 7/298 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +DKNT+V+ QG TGKA I Y T +VGG+ P KG ++++P+F T Sbjct: 35 NLRIDKNTRVIYQGFTGKAACERLLHTIEY-GTNIVGGVSPGKGGQT----HLSLPLFNT 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 EA + +AS ++VP A AIIE+IEAE+PL+V + E +P+ DM RV L+ ++ Sbjct: 90 AEEAMKAVNPHASAVFVPAQFAASAIIEAIEAEVPLVVSVAEHVPIHDMARVHEVLKAQN 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ PD C+IGIMP + KG +GI+S+SGTL+YEAV T++ GLGQS Sbjct: 150 KTRLVGPNCPGIIAPDQCRIGIMPYKQYTKGVIGIVSKSGTLSYEAVGATTKAGLGQSIV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKPI 239 VG+GGD + GT +D L+LF D T+ I+++GEIGG AE AA+ +K KPI Sbjct: 210 VGMGGDLMPGTTLLDGLKLFFDDVETKGIIVIGEIGGEAELRAAEAIKAYRESTSSPKPI 269 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V VAG+TAPPG+TMGHAGA++S G A+ K+ A+++AG I P P +G + LL Sbjct: 270 VAMVAGRTAPPGKTMGHAGAILSPGDVSADVKVKALRDAGAIIVPHPGTMGTEMKRLL 327 >gi|148273731|ref|YP_001223292.1| succinyl-CoA synthetase subunit alpha [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831661|emb|CAN02630.1| succinyl-CoA synthetase alpha chain [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 295 Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 142/302 (47%), Positives = 204/302 (67%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+N++++VQGLTG GT H + +L ++VVGG++P+K + T V +P+F Sbjct: 1 MSILLDENSRIIVQGLTGSEGTKHAGR-MLASGSKVVGGVNPRKAGSTVTIEGVELPIFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA T A+ SVI+VPP+ A A++E+I+A IPL V ITEGIPV D + + + Sbjct: 60 SVAEAMAETGADVSVIFVPPAFAKSAVVEAIDAAIPLAVVITEGIPVKDSAEFWSHAKST 119 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R++GPNCPGI++P GI+P +I G +G++S+SGTLTY+ +F+ LG S Sbjct: 120 GGKTRIVGPNCPGIISPGKSNAGIIPATITEAGPIGLVSKSGTLTYQMMFELRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID LE F AD T +IVM+GEIGG AEE AA+++K KP Sbjct: 178 TAIGIGGDPIIGTTHIDALEAFEADPETRAIVMIGEIGGDAEERAAEYIKAHV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SGG G A+ K A++ +G+ + +P L E+ Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGGSGTAQGKKEALEASGVKVGKTPTETANLLREVFA 293 Query: 299 SL 300 +L Sbjct: 294 AL 295 >gi|302555348|ref|ZP_07307690.1| succinyl-CoA synthetase subunit alpha [Streptomyces viridochromogenes DSM 40736] gi|302472966|gb|EFL36059.1| succinyl-CoA synthetase subunit alpha [Streptomyces viridochromogenes DSM 40736] Length = 293 Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 134/297 (45%), Positives = 190/297 (63%), Gaps = 7/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KVLVQG+TG G HT + +L T +VGG++P+K + VPVF Sbjct: 1 MAIYLTKESKVLVQGMTGGEGMKHTRR-MLAAGTNIVGGVNPRKAGRTVDFDDRAVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+ T A+ +V++VPP+ A A+ E+ +A I L V ITEGIPV D V A E+ Sbjct: 60 TVADGMRATGADVTVVFVPPAFAKAAVTEAADAGIGLAVVITEGIPVHDSVAFTAYAERQ 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R++GPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G ST Sbjct: 120 GTRVVGPNCPGLITPGQSNAGIIPADIAKPGRIGLVSKSGTLTYQLMYELRD--IGFSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L F D TE IV++GEIGG AEE AA +++ KP+V Sbjct: 178 VGIGGDPVVGTSHIDCLAAFQDDPDTELIVLIGEIGGDAEERAAAHVREHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P R ++ L Sbjct: 234 GYIAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVSVGSTPTETARLVLARL 290 >gi|226195|prf||1414360A succinyl-CoA synthetase alpha Length = 288 Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 153/283 (54%), Positives = 195/283 (68%), Gaps = 9/283 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ILV++ T+VLVQG+TG+ G FHT+Q + Y T++V G+ P KG T G VPV+ TV Sbjct: 2 ILVNRETRVLVQGITGREGQFHTKQMLDYG-TKIVAGVTPGKGGTEVLG----VPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA +AS+I+VP A DA +E+ A IPLIV ITEGIP LDMVR ++ S Sbjct: 57 KEAVAHHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIG NCPGI++ + KIGIMPG +F++G VGI+SRSGTLTYEA SQ GLG +T VG Sbjct: 117 RLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEAAAALSQAGLGTTTTVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV F D+L LF D TE++V++GEIGGS EEEAA ++KD KKP+VGF Sbjct: 177 IGGDPVITGTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKDHM----KKPVVGF 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + G++AP G+ MGHAGA+I G G E K+ A EAGI +A + Sbjct: 233 IGGRSAPKGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADT 275 >gi|290956174|ref|YP_003487356.1| succinyl-coa synthetase subunit alpha [Streptomyces scabiei 87.22] gi|260645700|emb|CBG68791.1| succinyl-coa synthetase alpha chain [Streptomyces scabiei 87.22] Length = 294 Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 136/299 (45%), Positives = 189/299 (63%), Gaps = 7/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + + ++VLVQG+TG G HT + +L T VVGG++P+K VPVF Sbjct: 1 MAIYLTQESRVLVQGMTGGEGMKHTRR-MLAAGTNVVGGVNPRKAGRTVDFDERAVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAE E T A+ +V++VPP+ A A++E+ +A I L V ITEGIPV D V A Sbjct: 60 SVAEGIEATGADVTVVFVPPAFAKAAVVEAADAGIGLAVVITEGIPVHDSVAFTAYARSR 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R++GPNCPG++TP GI+P I + G VG++S+SGTLTY+ +++ G ST Sbjct: 120 GTRIVGPNCPGLITPGQSNAGIIPADITKPGRVGLVSKSGTLTYQLMYELRDTGF--STC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L F D TE IV++GEIGG AEE AA +++D KP+V Sbjct: 178 VGIGGDPVVGTTHIDCLAAFQDDPDTELIVLIGEIGGDAEERAAAYVRDHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP GRTMGHAGA++SG G A+ K A++ G+ + +P R ++ L S Sbjct: 234 GYIAGFTAPEGRTMGHAGAIVSGSSGTAQAKKEALEAVGVRVGGTPTETARLVLAALES 292 >gi|302557240|ref|ZP_07309582.1| succinyl-CoA synthetase, alpha subunit [Streptomyces griseoflavus Tu4000] gi|302474858|gb|EFL37951.1| succinyl-CoA synthetase, alpha subunit [Streptomyces griseoflavus Tu4000] Length = 299 Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 135/297 (45%), Positives = 188/297 (63%), Gaps = 7/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KVLVQG+TG G HT + +L T VVGG++P+K VPVF Sbjct: 6 MAIHLTKESKVLVQGMTGGEGMKHTRR-MLAAGTDVVGGVNPRKAGRSVAFDERAVPVFG 64 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAE + T A+ +V++VPP+ A A+ E+ +A I L V ITEGIPV D V A Sbjct: 65 SVAEGMDATGADVTVVFVPPAFAKAAVTEAADAGIGLAVVITEGIPVHDSVAFLAHARPR 124 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ G ST Sbjct: 125 GTRVIGPNCPGLITPGQSNAGIIPADIAKPGRIGLVSKSGTLTYQLMYELRDTGF--STC 182 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L F D T+ IV++GEIGG AEE AA +++D KP+V Sbjct: 183 VGIGGDPVVGTTHIDCLAAFQDDPDTDLIVLIGEIGGDAEERAAAYIRDHV----TKPVV 238 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP GRTMGHAGA++SG G A K A++ AG+ + +P + ++ +L Sbjct: 239 GYIAGFTAPEGRTMGHAGAIVSGSSGTARAKQEALEAAGVRVGHTPTETAQQVLAVL 295 >gi|159041786|ref|YP_001541038.1| succinyl-CoA synthetase, alpha subunit [Caldivirga maquilingensis IC-167] gi|157920621|gb|ABW02048.1| succinyl-CoA synthetase, alpha subunit [Caldivirga maquilingensis IC-167] Length = 292 Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 132/292 (45%), Positives = 194/292 (66%), Gaps = 12/292 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVD+NT+VLVQG+TG G+ HT + Y T+VV G+ P +G G VPV+ Sbjct: 1 MTILVDQNTRVLVQGITGSEGSRHTLYMLQYG-TKVVAGVTPGRGGQQVHG----VPVYD 55 Query: 61 TVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA ++ N S+I+VP A DA+ E+++ I L+V ITE IP+ D +R + Sbjct: 56 SVEEALRKHPEINTSIIFVPARFASDAVYEAVDNGIRLVVIITEHIPIHDAIRFVNYAKY 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +IGPNCPG+++P K+GI+P +++ +KG VGI+SRSGTLTYE + +Q G GQS Sbjct: 116 KGTVIIGPNCPGVVSPTISKVGILPNNVYVKKGPVGIISRSGTLTYEISYHLTQAGFGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KK 237 T VGIGGDP+ GT+ ++ ++ D T+ +V++GEIGG EE A +++ G+ K Sbjct: 176 TVVGIGGDPIIGTDMVEAALMYENDPETKYLVVIGEIGGDQEERLASLVRE----GKVTK 231 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 PIV F+AG+TAPPG+ +GHAGA+IS G G E K+ A++ AGI +A +P + Sbjct: 232 PIVAFIAGRTAPPGKRLGHAGAIISMGVGTYEGKVKALESAGIKVAKTPLEV 283 >gi|134045819|ref|YP_001097305.1| succinyl-CoA synthetase subunit alpha [Methanococcus maripaludis C5] gi|132663444|gb|ABO35090.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methanococcus maripaludis C5] Length = 287 Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 131/295 (44%), Positives = 194/295 (65%), Gaps = 9/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NT+ +VQG+TG G FHT+ +L C T VV G+ P K G VPV+ TV Sbjct: 2 ILLDENTRAIVQGITGNQGRFHTKN-MLECNTNVVAGVTPGKAGQDVYG----VPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E E+ ANAS+I++P DA E+++A + L+ ITE IP+ D + + A +K Sbjct: 57 LETVEKYDANASLIFIPAPFVKDAAYEAVDAGLDLVTIITEHIPIQDSMDIVAYGKKHGV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PG+ +P K+GI+P SI ++G++G++SRSGTLTYE Q + GQS+ VG Sbjct: 117 NIIGPNTPGLASPKVGKLGIIPVSILKEGNIGMVSRSGTLTYEIASQLTTSNYGQSSCVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP+ G +I+VLE+F D T+++VMVGEIGG+AEE+AA+ + + KKP++ + Sbjct: 177 IGGDPITGLRYIEVLEMFEKDSETDAVVMVGEIGGNAEEDAAEKMISK----MKKPVISY 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG++AP G+ MGHAGA+I G G A+ K+ A++ AG +A + I L E++ Sbjct: 233 IAGQSAPEGKRMGHAGAIIEKGVGTAKSKMEALENAGAHVAKRISDIPLLLKEII 287 >gi|2290210|gb|AAC48339.1| adhesin protein AP33-3 [Trichomonas vaginalis] Length = 309 Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 144/294 (48%), Positives = 207/294 (70%), Gaps = 8/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DK+TKV++QG+ G G FH+ Y T+VVG +HPKK + G +P+F + Sbjct: 15 LFIDKDTKVVIQGI-GNQGQFHSRLMRQYG-TKVVGAVHPKKAGSIIAG----LPIFKNM 68 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E +RT ANAS+I+VP GA A IE+ +A + L+VCITE IP DM++VK ++++ Sbjct: 69 KEVVKRTDANASLIFVPAPGAAAACIEAAQAGMGLVVCITEHIPQHDMIKVKKVMKETGC 128 Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +LIGPNCPG++ P + K+GI+P +IF G +GI+SRSGTLTYEA + T+ GLGQST V Sbjct: 129 QLIGPNCPGLIQPGTHTKLGIIPTNIFNNGKIGIVSRSGTLTYEAAYATTLAGLGQSTVV 188 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP G DV++ F AD TE I+++GEIGG++EE+AA+++ + K ++KP+V Sbjct: 189 GIGGDPFAGQLHTDVVKRFAADPQTEGIILIGEIGGTSEEDAAEWIA-KTKLTQEKPVVA 247 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPG+ MGH+GA++SGGKG AE K A++ AG+ IA P +G+ + E Sbjct: 248 FIAGATAPPGKRMGHSGAIVSGGKGTAEGKYKALEAAGVRIARHPGNMGKFIFE 301 >gi|29828359|ref|NP_822993.1| succinyl-CoA synthetase subunit alpha [Streptomyces avermitilis MA-4680] gi|29605462|dbj|BAC69528.1| putative succinyl-CoA synthetase alpha subunit [Streptomyces avermitilis MA-4680] Length = 299 Score = 248 bits (634), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 137/297 (46%), Positives = 190/297 (63%), Gaps = 7/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KVLVQG+TG G HT + +L T VVGG++P+K VPVF Sbjct: 1 MAIYLTKESKVLVQGMTGGEGMKHTRR-MLAAGTDVVGGVNPRKAGRAVDFDERTVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V E +E T A+ +V++VPP+ A A++E+ +A I L V ITEGIPV D V A Sbjct: 60 SVREGREATGADVTVVFVPPAFAKAAVVEAADAGIALTVVITEGIPVHDAVAFHAYAAAK 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG+++P GI+P I + G +G++S+SGTLTY+ +++ +G ST Sbjct: 120 GTRIIGPNCPGLISPGQSNAGIIPADITKPGRIGLVSKSGTLTYQLMYELRD--IGFSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L F AD TE IV++GEIGG AEE AA +++D KP+V Sbjct: 178 VGIGGDPVVGTSHIDCLAAFEADPDTELIVLIGEIGGDAEERAAAYVRDHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP GRTMGHAGA++SG G A K A++ AG+ + +P R ++ L Sbjct: 234 GYIAGFTAPEGRTMGHAGAIVSGSSGTARAKKEALEGAGVQVGGTPTATARLVLARL 290 >gi|25029005|ref|NP_739059.1| succinyl-CoA synthetase subunit alpha [Corynebacterium efficiens YS-314] gi|259506006|ref|ZP_05748908.1| succinyl-CoA synthetase subunit alpha [Corynebacterium efficiens YS-314] gi|23494292|dbj|BAC19259.1| putative succinyl-CoA synthetase alpha subunit [Corynebacterium efficiens YS-314] gi|259166487|gb|EEW51041.1| succinyl-CoA synthetase subunit alpha [Corynebacterium efficiens YS-314] Length = 294 Score = 248 bits (633), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 140/298 (46%), Positives = 203/298 (68%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +D +++++QG+TG G+ HT + +L VVGG +P+K T G+ +PVF Sbjct: 1 MAIFLDDTSRIIIQGITGSEGSLHTSR-MLASGATVVGGTNPRKAGETVTLGDTELPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TVAEA E T AN SV++VPP+ AG+A+ E+I+A IPL+V ITEGIPV D+ A ++ Sbjct: 60 TVAEAMEATEANVSVVFVPPAFAGEAMREAIDARIPLLVVITEGIPVRDVAEAWAHAQQV 119 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S+R+IGPNCPGI+TP GI+P +I G +G++S+SGTLTY+ + + + G+ ST Sbjct: 120 GSTRIIGPNCPGIITPGVSLAGIIPATITGSGPIGLISKSGTLTYQMMNELADVGI--ST 177 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDP+ GT ID L F D TE+IVM+GEIGG AEE AA+F++D KP+ Sbjct: 178 AIGIGGDPIIGTTHIDALRAFEDDPDTEAIVMIGEIGGDAEERAAEFIRDHV----SKPV 233 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VG+VAG TAP G+TMGHAGA+++G G A+ K A++ G+ + +P+ + E++ Sbjct: 234 VGYVAGFTAPEGKTMGHAGAIVTGSVGTAQAKKEALEAVGVRVGTTPSEAAEIMKEII 291 >gi|150398913|ref|YP_001322680.1| succinyl-CoA synthetase subunit alpha [Methanococcus vannielii SB] gi|150011616|gb|ABR54068.1| succinyl-CoA synthetase, alpha subunit [Methanococcus vannielii SB] Length = 287 Score = 248 bits (633), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 131/295 (44%), Positives = 194/295 (65%), Gaps = 9/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NT+ +VQG+TG G FHT Q +L C+T +V G+ P K G +PV+ TV Sbjct: 2 ILLDENTRAVVQGITGNQGRFHT-QNMLECKTNIVAGVTPGKAGQDVYG----IPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E E+ NASVI++P DA E+I+A I L+ ITE +P+ D + + + +K Sbjct: 57 LETVEKYDVNASVIFIPAPFVKDAAYEAIDAGIELVTIITEHVPIQDSMDIVSYGKKHGV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PG+ +P K+GI+P +I ++G++G++SRSGTLTYE Q + G GQST VG Sbjct: 117 NIIGPNTPGLASPKVGKLGIIPMNILKEGNIGMISRSGTLTYEIASQLTISGHGQSTCVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV G +I+VLE+F D T++I+MVGEIGG+AEE AA+ + + KKP++ + Sbjct: 177 IGGDPVTGLRYIEVLEMFEKDRETDAIIMVGEIGGNAEENAAEKMVSKM----KKPVISY 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG++AP G+ MGHAGA+I G G A+ K+ A++ +G +A + I L E++ Sbjct: 233 IAGQSAPEGKRMGHAGAIIEKGVGTAKSKMEALENSGAYVAKRISDIPLILKEII 287 >gi|282860914|ref|ZP_06269980.1| succinyl-CoA synthetase, alpha subunit [Streptomyces sp. ACTE] gi|282564650|gb|EFB70186.1| succinyl-CoA synthetase, alpha subunit [Streptomyces sp. ACTE] Length = 294 Score = 248 bits (633), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 140/299 (46%), Positives = 197/299 (65%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT + +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGATGMKHT-KLMLADGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 +V EA E+T A+ SV++VPP+ A A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 SVKEAMEKTGADVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAYAGAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA ++ + KP Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPETDLIVMIGEIGGDAEERAADYI----AKNVTKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P + E+L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPTETAKLAREIL 292 >gi|86211694|gb|ABC87498.1| succinyl-CoA synthetase alpha chain [Streptomyces sp. NRRL 30748] Length = 294 Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 135/290 (46%), Positives = 188/290 (64%), Gaps = 9/290 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KV+VQG+TG G HT + +L T +VGG++P+K T +PVF Sbjct: 1 MAIFLTKESKVIVQGMTGSEGQKHTRR-MLASGTNIVGGVNPRKAGTTVDFDGTEIPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 +V EA + T A+ +VI+VP A+IE+I+AEIPL V ITEGI V D A K Sbjct: 60 SVKEAIDATGADVTVIFVPEKFTKSAVIEAIDAEIPLAVVITEGIAVHDSANFWAYAGKK 119 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPADITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + VGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA F+K KP Sbjct: 178 SCVGIGGDPIIGTTHIDALAAFQADPDTDLIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSE 283 >gi|78357377|ref|YP_388826.1| succinyl-CoA synthetase (ADP-forming) subunit alpha / succinyl-CoA synthetase (ADP-forming) subunit beta [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219782|gb|ABB39131.1| succinyl-CoA synthetase (ADP-forming) alpha subunit / succinyl-CoA synthetase (ADP-forming) beta subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 700 Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 132/293 (45%), Positives = 185/293 (63%), Gaps = 8/293 (2%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 +D ++ VLVQGLTG+ H + Y T+VV G+ P KG G +PV+ +V E Sbjct: 413 LDSSSGVLVQGLTGRVAQRHAALMMEY-GTRVVAGVTPFKGGQEVMG----IPVYDSVHE 467 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 A +AS+I+VP + A DA++E+ EIP +VCITEGIP M+ ++ S + + Sbjct: 468 ACRHHRIDASIIFVPAAFAPDAVLEAAAEEIPWVVCITEGIPQAAMLSALKNIQPSPTCV 527 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPN PGI+ P KIGIMPG +F G V + SRSGTLTYEA + S G+GQS VG+G Sbjct: 528 VGPNTPGIVVPHQLKIGIMPGYVFSPGPVAVFSRSGTLTYEAASRLSAAGIGQSVCVGVG 587 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 GD GT F+D+ E D AT +++++GE+GG AEEE A++++ + G KP+V FVA Sbjct: 588 GDSFVGTGFVDLCERVRHDAATRAVLVLGEVGGRAEEELAEYVR---RTGFSKPVVSFVA 644 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +TAPPGR +GHAGA++ GG E K+ AM+EAG I P A + R + +L Sbjct: 645 ARTAPPGRRLGHAGAILDETTGGVEAKLQAMREAGFTICPDLASLPRIMRAVL 697 >gi|300742289|ref|ZP_07072310.1| succinyl-CoA synthetase, alpha subunit [Rothia dentocariosa M567] gi|311112206|ref|YP_003983428.1| succinyl-CoA synthetase subunit alpha [Rothia dentocariosa ATCC 17931] gi|300381474|gb|EFJ78036.1| succinyl-CoA synthetase, alpha subunit [Rothia dentocariosa M567] gi|310943700|gb|ADP39994.1| succinyl-CoA synthetase subunit alpha [Rothia dentocariosa ATCC 17931] Length = 305 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 146/311 (46%), Positives = 209/311 (67%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI V+K++KV+VQG+TG GT HT + +L T +VGG++ +K T T G +V Sbjct: 1 MSIFVNKDSKVIVQGITGGEGTKHTAR-MLAAGTNIVGGVNARKAGTTVTHKAKDGSDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR--- 112 + VF TVAEA T A+ S+++VPP+ A++E+IEA+I L+V ITEG+PV D Sbjct: 60 LKVFGTVAEAIAETGADVSIVFVPPAFTKAAVLEAIEAKIGLVVVITEGVPVQDTAEFWA 119 Query: 113 -VKARLE---KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 KA ++ K +R+IGPNCPGI+TP+ C +GI P +I KG +G++S+SGTLTY+ +F Sbjct: 120 AAKASVDENGKQITRIIGPNCPGIITPEECLVGITPANITGKGKIGLVSKSGTLTYQMMF 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + + +G +TA+GIGGDP+ GT ID LE F AD TE IVM+GEIGG AEE AA+++K Sbjct: 180 ELAD--IGFTTAIGIGGDPIIGTTHIDALEAFEADPETEGIVMIGEIGGDAEERAAEYIK 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 238 ANV----TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSE 293 Query: 289 IGRSLVELLGS 299 + E+ + Sbjct: 294 AANLMREIFAN 304 >gi|302544605|ref|ZP_07296947.1| succinyl-CoA synthetase, alpha subunit [Streptomyces hygroscopicus ATCC 53653] gi|302462223|gb|EFL25316.1| succinyl-CoA synthetase, alpha subunit [Streptomyces himastatinicus ATCC 53653] Length = 294 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 140/289 (48%), Positives = 191/289 (66%), Gaps = 11/289 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVF 59 M+I + K +KV+VQG+TG G HT + +L T +VGG++P+K G+T GN VPVF Sbjct: 1 MAIFLTKESKVIVQGMTGSEGQKHTRR-MLASGTNIVGGVNPRKAGTTVDFDGN-EVPVF 58 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA E T A+ +VI+VP A+IE+I+AEIPL V ITEGI V D A + Sbjct: 59 GSVKEAIEATGADVTVIFVPEKFTKSAVIEAIDAEIPLAVVITEGIAVHDSANFWAYAGQ 118 Query: 120 --SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G Sbjct: 119 KGNKTRIIGPNCPGLITPGQSNAGIIPADITKPGRIGLVSKSGTLTYQMMYELRD--IGF 176 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S+ VGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA F+K K Sbjct: 177 SSCVGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAADFIKANV----TK 232 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 P+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P Sbjct: 233 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTP 281 >gi|261337761|ref|ZP_05965645.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium gallicum DSM 20093] gi|270277214|gb|EFA23068.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium gallicum DSM 20093] Length = 306 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 136/312 (43%), Positives = 196/312 (62%), Gaps = 19/312 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTY------WTGGNV 54 MS ++ N V+VQG+TG G HT + +L T +VGG++P+K T G +V Sbjct: 1 MSAFIEDNAPVIVQGMTGHQGMTHTLR-MLKAGTNIVGGVNPRKAGTTVLFEGAHDGEDV 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 ++PV+ T AEAKE T A ASV++VPP A DA++E+IEA I LIV ITEGIPV D Sbjct: 60 HIPVYATCAEAKEATGAKASVVFVPPRFAKDAVVEAIEAGIELIVVITEGIPVNDSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGILT------PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 R++GPNCPG++T +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALSRGVRIVGPNCPGLMTLGESEHARGVNLGIIPDGIVSRGPLGLVSKSGTLTYQMMA 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G GGDP+ GT + L+ F D+ T++++M+GEIGG AE+EAAQ+ Sbjct: 180 ELSD--IGFTACLGAGGDPIVGTMLREALQEFEQDDDTKAVIMIGEIGGKAEQEAAQWAH 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 D KP+V ++AG TAP G+ MGHAGA+ISGGKG A+DK A++ GI + +P+ Sbjct: 238 DH----MTKPVVAYIAGFTAPEGKQMGHAGAIISGGKGTAQDKKEALEAVGIPVGKTPSE 293 Query: 289 IGRSLVELLGSL 300 R + E+L L Sbjct: 294 AARLMREVLAQL 305 >gi|227506175|ref|ZP_03936224.1| succinyl-CoA synthetase subunit alpha [Corynebacterium striatum ATCC 6940] gi|227197199|gb|EEI77247.1| succinyl-CoA synthetase subunit alpha [Corynebacterium striatum ATCC 6940] Length = 294 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 134/300 (44%), Positives = 195/300 (65%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K+++++VQG+TG G HT + +L + +VGG++PKK +PVF Sbjct: 1 MSIFLNKDSRIIVQGMTGAEGMKHTRR-MLASGSNIVGGVNPKKAGERVDIEGQQIPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA + T AN +VI+VP DA E+I A I L+V ITEG+PV D + A +S Sbjct: 60 SVREAMQATDANVTVIFVPAKFTKDAAEEAIRAGIELVVIITEGVPVKDTAELFALARES 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +R+IGPNCPG+ +P GI+P G +G++S+SGTLTY+ +++ S +G ST Sbjct: 120 KTRIIGPNCPGLYSPGQSNAGIIPAETAPNPGKIGLVSKSGTLTYQMMYELSD--IGFST 177 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT I +E F D TE+I+M+GEIGG AEE AA+++K+ KP+ Sbjct: 178 CVGIGGDPIIGTTHITAIEAFEKDPETEAIIMIGEIGGDAEEYAARYIKEHV----TKPV 233 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V ++AG TAP G+TMGHAGA++SGG G AE K A++EAG+ + +P++ + L E L S Sbjct: 234 VAYIAGFTAPEGKTMGHAGAIVSGGSGTAEGKKAALEEAGVKVGKTPSQAAQLLREALKS 293 >gi|300782734|ref|YP_003763025.1| succinyl-CoA synthetase alpha subunit [Amycolatopsis mediterranei U32] gi|299792248|gb|ADJ42623.1| succinyl-CoA synthetase alpha subunit [Amycolatopsis mediterranei U32] Length = 296 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 144/303 (47%), Positives = 199/303 (65%), Gaps = 12/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +++N+KV+VQGLTG G H + +L T +VGG++ +K T ++ VF Sbjct: 1 MSIFLNENSKVIVQGLTGSEGMKHATK-MLKSGTNIVGGVNARKAGQTVTIEGKDLKVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TV EA + T A+ SVI+VPP A DA++E+I+AEIPL V ITEGIPV D A + Sbjct: 60 TVEEAIKETGADVSVIFVPPKFAKDAVLEAIDAEIPLAVVITEGIPVHDSAYFWAHAVAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +++R+IGPNCPG+++P GI+P I G++G++S+SGTLTY+ +++ +G S Sbjct: 120 GNTTRIIGPNCPGVISPGKSNAGIIPADITGPGNIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDP+ GT ID LE F AD T+ IVM+GEIGG AEE AA ++K KP Sbjct: 178 TAVGIGGDPIIGTTHIDALEAFEADPETKVIVMIGEIGGDAEERAAAYIKANVT----KP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP---ARIGRSLVE 295 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P A + R L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVRVGKTPSETAVLARELYN 293 Query: 296 LLG 298 LG Sbjct: 294 NLG 296 >gi|1710865|sp|P53399|SUCA1_TRIVA RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha-1, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha-1; Short=SCS-alpha-1; Flags: Precursor gi|538509|gb|AAC41558.1| succinyl CoA synthetase-1 alpha subunit [Trichomonas vaginalis] Length = 309 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 146/294 (49%), Positives = 206/294 (70%), Gaps = 8/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DK+TKV++QG+ G G FH+ Y T+VVG +HPKK T G +P+F + Sbjct: 15 LFIDKDTKVVIQGI-GNQGQFHSRLMRQYG-TKVVGAVHPKKAGTIIAG----LPIFKNM 68 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E +RT ANAS+I+VP GA A IE+ EA + L+VCITE IP DM++VK ++++ Sbjct: 69 KEVVKRTDANASLIFVPAPGAAAACIEAAEAGMGLVVCITEHIPQHDMIKVKKVMKETGC 128 Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +LIGPNCPG++ P + K+GI+P +IF G +GI+SRSGTLTYEA + T+ GLGQST V Sbjct: 129 QLIGPNCPGLIQPGTHTKLGIIPTNIFNNGKIGIVSRSGTLTYEAAYATTLAGLGQSTVV 188 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP G DV++ F AD TE I+++GEIGG++EE+AA+++ + K ++KP+V Sbjct: 189 GIGGDPFAGQLHTDVVKRFAADPQTEGIILIGEIGGTSEEDAAEWIA-KTKLTQEKPVVA 247 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 +AG TAPPG+ MGHAGA++SGGKG AE K A++ AG+ IA P +G+ + E Sbjct: 248 SIAGATAPPGKRMGHAGAIVSGGKGTAEGKYKALEAAGVRIARHPGNMGKFIFE 301 >gi|302524120|ref|ZP_07276462.1| succinyl-coa synthetase subunit alpha [Streptomyces sp. AA4] gi|302433015|gb|EFL04831.1| succinyl-coa synthetase subunit alpha [Streptomyces sp. AA4] Length = 296 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 144/302 (47%), Positives = 195/302 (64%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +++N+KV+VQGLTG G H + +L T +VGG++ +K T ++ VF Sbjct: 1 MSIFLNENSKVIVQGLTGSEGMKHATK-MLKSGTNIVGGVNARKAGQTVTIEGKDLTVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 TV EA + T A+ SVI+VPP A DA+IE+I+AEIPL V ITEGIPV D A Sbjct: 60 TVEEAIKETGADVSVIFVPPKFAKDAVIEAIDAEIPLAVVITEGIPVHDSAYFWAHAVAT 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG+++P GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGVISPGKSNAGIIPADITGAGPIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV GT ID LE F D T+ IVM+GEIGG AEE AA ++K+ KP Sbjct: 178 TAVGIGGDPVIGTTHIDALEAFEKDADTKVIVMIGEIGGDAEERAAAYIKENV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ EL Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAVLARELYN 293 Query: 299 SL 300 SL Sbjct: 294 SL 295 >gi|296130373|ref|YP_003637623.1| succinyl-CoA synthetase, alpha subunit [Cellulomonas flavigena DSM 20109] gi|296022188|gb|ADG75424.1| succinyl-CoA synthetase, alpha subunit [Cellulomonas flavigena DSM 20109] Length = 292 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 141/288 (48%), Positives = 194/288 (67%), Gaps = 7/288 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + + +KV+VQG+TG G HT + +L T VVGG++P+K T T G+V VPVF Sbjct: 1 MAIFLTETSKVIVQGMTGSEGQKHTTR-MLASGTNVVGGVNPRKAGTSVTFGDVEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA E+T A+ SVI+VPP+ A+IE+++A IPL V ITEG+PV D A + Sbjct: 60 SVAEAIEKTGADVSVIFVPPAHTKAAVIEAVDAGIPLAVIITEGVPVADTAEFFAYAQAK 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG+++P +GI+P I G VG++S+SGTLTY+ +++ G STA Sbjct: 120 GVRLIGPNCPGLISPGKSNVGIIPADITGPGKVGLVSKSGTLTYQMMYELRD--FGFSTA 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID LE F D TE IVM+GEIGG AEE AA +++ KP+V Sbjct: 178 IGIGGDPIIGTTHIDALEAFEKDPETEVIVMIGEIGGDAEERAAAYIQAHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 G+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 234 GYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSE 281 >gi|329945410|ref|ZP_08293173.1| succinyl-CoA synthetase, alpha subunit [Actinomyces sp. oral taxon 170 str. F0386] gi|328529032|gb|EGF55963.1| succinyl-CoA synthetase, alpha subunit [Actinomyces sp. oral taxon 170 str. F0386] Length = 313 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 141/314 (44%), Positives = 194/314 (61%), Gaps = 24/314 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT---------- 50 MSI + + V+VQG+TG G HT + +L T+VV G++P+K T Sbjct: 1 MSIFLTETDSVIVQGMTGSEGRKHTTR-MLSAGTKVVAGVNPRKAGTAVAFDIAPIGPGA 59 Query: 51 ----GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G V VPV+ TVAEAKE T A SV++VPP+ A A++E+++A + L+V ITEGIP Sbjct: 60 GEVQSGTVEVPVYGTVAEAKEATGAEVSVVFVPPAFAKGAVVEAVDAGVRLVVVITEGIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D ++A + ++IGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VADATWMRAYAAERGVQIIGPNCPGIISPARSNVGITPPDITGPGPLGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + S LG +T +GIGGDPV GT ID L F AD T +VM+GEIGG AEE AA + Sbjct: 180 MHELSD--LGFTTCIGIGGDPVVGTTHIDALTAFEADPDTRLVVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +++ KP+V +VAG TAP GRTMGHAGA++SG G AE K A++ AG+ + +P Sbjct: 238 IREH----MTKPVVAYVAGFTAPEGRTMGHAGAIVSGSSGTAEAKKTALEAAGVRVGRTP 293 Query: 287 ---ARIGRSLVELL 297 A I R L L Sbjct: 294 SQTAEIARELYRAL 307 >gi|84489392|ref|YP_447624.1| succinyl-CoA synthetase subunit alpha [Methanosphaera stadtmanae DSM 3091] gi|84372711|gb|ABC56981.1| SucD [Methanosphaera stadtmanae DSM 3091] Length = 288 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 135/295 (45%), Positives = 190/295 (64%), Gaps = 11/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NTK +VQG+TGK G FHT++ + Y T +V G P K G VPV+ ++ Sbjct: 2 ILLDENTKAVVQGITGKQGRFHTKEMVEY-NTNIVAGTSPGKAGQTVDG----VPVYNSI 56 Query: 63 AEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 E K++ NAS+I++P DA E+I +++ L++ ITE +P+ D + + ++ + Sbjct: 57 EEIKQKHPEVNASIIFIPAPFVKDAAFEAI-SQLDLVIIITEHLPIHDSMEIVEYAKQHN 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 + LIGPN PGI+TP K+GIMP IF+KG VG++SRSGTLTYE Q S G G STAV Sbjct: 116 TTLIGPNTPGIITPGVGKLGIMPTHIFKKGKVGLVSRSGTLTYEVASQISAAGYGLSTAV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G+GGDPV G F ++LE F D TE IVM+GEIGG AE +AA++ A+ KPI+ Sbjct: 176 GVGGDPVTGESFTNILEKFENDPETEQIVMLGEIGGIAEVKAAKY----AQENLTKPIIS 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 F+AG +AP G+ MGHAGA+I G G A++K +K G+ +A P+ I L E+ Sbjct: 232 FIAGVSAPLGKRMGHAGAIIEGTDGTAQNKKELLKSYGVHVADIPSDIVTILNEI 286 >gi|326771946|ref|ZP_08231231.1| succinyl-CoA synthetase subunit alpha [Actinomyces viscosus C505] gi|326638079|gb|EGE38980.1| succinyl-CoA synthetase subunit alpha [Actinomyces viscosus C505] Length = 313 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 141/314 (44%), Positives = 195/314 (62%), Gaps = 24/314 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT---------- 50 MSI + + +V+VQG+TG G HT + +L T+VV G++P+K T Sbjct: 1 MSIFLTETDRVIVQGMTGSEGRKHTTR-MLSAGTKVVAGVNPRKAGTTVAFDVAPIGPGA 59 Query: 51 ----GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G V VPV+ TVAEAKE T A SV++VPP+ A A++E+++A + L+V ITEGIP Sbjct: 60 GEVQAGTVEVPVYGTVAEAKEATGAEVSVVFVPPAFAKGAVVEAVDAGVRLLVVITEGIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D ++A + ++IGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VADATWMRAYAAEHGVQIIGPNCPGIISPARSNVGITPPDITGPGPLGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + S LG +T +GIGGDPV GT ID L F AD T +VM+GEIGG AEE AA + Sbjct: 180 MHELSD--LGFTTCIGIGGDPVVGTTHIDALAAFEADPDTRLVVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +++ KP+V +VAG TAP GRTMGHAGA++SG G AE K A++ AG+ + +P Sbjct: 238 IREH----MTKPVVAYVAGFTAPEGRTMGHAGAIVSGSSGTAEAKKIALEAAGVRVGRTP 293 Query: 287 ---ARIGRSLVELL 297 A I R L L Sbjct: 294 SQTAEIARELYRQL 307 >gi|297566585|ref|YP_003685557.1| succinyl-CoA synthetase subunit alpha [Meiothermus silvanus DSM 9946] gi|296851034|gb|ADH64049.1| succinyl-CoA synthetase, alpha subunit [Meiothermus silvanus DSM 9946] Length = 290 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 149/284 (52%), Positives = 195/284 (68%), Gaps = 10/284 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNTKVLVQG+TG+ G FHTEQ ++ T VV G+ P KG G VPV+ Sbjct: 1 MSILVDKNTKVLVQGITGREGAFHTEQ-MMKAGTSVVAGMTPGKGGQTALG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +AS+I+VP GA DA +E+ A IPL+V ITEGIP LDMV+ A ++ Sbjct: 56 TVKEATTHHHIDASIIFVPAPGAADAALEAAHAGIPLVVLITEGIPTLDMVKAVAEIKAM 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + RLIG NCPG++TP CK+GIMP ++F++G VG++SRSGT+TYE S G G ST Sbjct: 116 GNVRLIGGNCPGLITPGECKLGIMPANVFKRGKVGLISRSGTVTYETAKALSDAGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT F D+L LF D TE++V+ GEIGGS EE+AA+++K KKP+ Sbjct: 176 CIGIGGDPIIGTTFKDLLPLFNEDPETEAVVICGEIGGSDEEDAAEYIKAR----MKKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 VGF+ G++AP G+ MGHAGA+I G G E K+ A +A + +A Sbjct: 232 VGFIGGRSAPKGKKMGHAGAIIMGNVGTPESKLAAFADADVPVA 275 >gi|188587003|ref|YP_001918548.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351690|gb|ACB85960.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Natranaerobius thermophilus JW/NM-WN-LF] Length = 290 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 139/297 (46%), Positives = 195/297 (65%), Gaps = 13/297 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKN+K+LVQG+TG G FHT Q + Y + VV G+ P KG G VPV+ Sbjct: 1 MAILLDKNSKILVQGITGYQGRFHTRQMLEYG-SNVVAGVSPGKGGQEVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 + A A T AN S + VP S DA+ E+I+A + L+ ITE IPV D + + A + Sbjct: 56 SAASAVRETDANVSAVMVPASFGKDAVFEAIDAGMDLVAIITEHIPVQDAMEIMAFARER 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + +IGPN GI+TP K+GIMP ++ G G+++RSGTL+Y+ S+ G+GQSTA Sbjct: 116 GTTIIGPNTFGIITPGQSKLGIMPNESYQPGRTGLVARSGTLSYQIAEGLSRVGVGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGD V G+EFID+LE F D T+ +VMVGEIGG+AEEEAA+F+ ++ KP+ Sbjct: 176 IGLGGDRVVGSEFIDMLEHFEQDPGTDQVVMVGEIGGTAEEEAAEFIANKM----TKPVY 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AGK+APPG+ MGHAGA+I GKG + K+ A++ AG+ +A P LVE+L Sbjct: 232 AYIAGKSAPPGKRMGHAGAIIERGKGTFDSKVQALRSAGVEVASLPWE----LVEIL 284 >gi|307330697|ref|ZP_07609835.1| succinyl-CoA synthetase, alpha subunit [Streptomyces violaceusniger Tu 4113] gi|306883676|gb|EFN14724.1| succinyl-CoA synthetase, alpha subunit [Streptomyces violaceusniger Tu 4113] Length = 294 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 135/290 (46%), Positives = 188/290 (64%), Gaps = 9/290 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KV+VQG+TG G HT + +L T +VGG++P+K T +PVF Sbjct: 1 MAIFLTKESKVIVQGMTGSEGQKHTRR-MLASGTNIVGGVNPRKAGTTVDFDGSEIPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 +V EA + T A+ +VI+VP A+IE+I+AEIPL V ITEGI V D A K Sbjct: 60 SVKEAVDATGADVTVIFVPEKFTKGAVIEAIDAEIPLAVVITEGIAVHDSANFWAYAGKK 119 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPADITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + VGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA F+K KP Sbjct: 178 SCVGIGGDPIIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSE 283 >gi|320532403|ref|ZP_08033241.1| succinyl-CoA synthetase subunit alpha [Actinomyces sp. oral taxon 171 str. F0337] gi|320135380|gb|EFW27490.1| succinyl-CoA synthetase subunit alpha [Actinomyces sp. oral taxon 171 str. F0337] Length = 313 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 141/314 (44%), Positives = 195/314 (62%), Gaps = 24/314 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT---------- 50 MSI + +N +V+VQG+TG G HT + +L T+VV G++P+K T + Sbjct: 1 MSIFLTENDRVIVQGMTGSEGRKHTTR-MLSAGTKVVAGVNPRKAGTTVSFDVTPIGPGA 59 Query: 51 ----GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G V VPV TVAEAKE T A SV++VPP+ A A++E+++A + L+V ITEGIP Sbjct: 60 GEVQAGTVEVPVHGTVAEAKEATGAEVSVVFVPPAFAKGAVVEAVDAGVRLVVVITEGIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D ++A ++IGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VADATWMRAYAADRGVQIIGPNCPGIISPARSNVGITPPDITGPGPLGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + S LG +T +GIGGDPV GT ID L F AD T +VM+GEIGG AEE AA + Sbjct: 180 MHELSD--LGFTTCIGIGGDPVVGTTHIDALAAFEADPDTRLVVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +++ KP+V +VAG TAP GRTMGHAGA++SG G A+ K A++ AG+ + +P Sbjct: 238 IREH----MTKPVVAYVAGFTAPEGRTMGHAGAIVSGSSGTADAKKIALEAAGVRVGRTP 293 Query: 287 ---ARIGRSLVELL 297 A I R L L Sbjct: 294 SQTAEIARELYRRL 307 >gi|225175981|ref|ZP_03729973.1| succinyl-CoA synthetase, alpha subunit [Dethiobacter alkaliphilus AHT 1] gi|225168569|gb|EEG77371.1| succinyl-CoA synthetase, alpha subunit [Dethiobacter alkaliphilus AHT 1] Length = 290 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 135/297 (45%), Positives = 189/297 (63%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + +T+VLVQG+TG G+FHT Q + Y T+VV G+ P KG G +PV+ Sbjct: 1 MAIYLYDDTQVLVQGMTGNQGSFHTRQMVKYG-TKVVAGVSPGKGGQELDG----IPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA A E+ +AS++++P A DA E+I+A + ++V + E IPV D + + A + Sbjct: 56 TVAAAVEKHRIDASILFIPAPFAKDAAFEAIDAGVKVLVMLPEHIPVQDAMEIMAFAKSR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + + GPN G+++ CKIGIMP F G +G++SRSGTL YE V + G G ST Sbjct: 116 GTVVAGPNTFGVVSSGKCKIGIMPNQFFVPGDIGVVSRSGTLCYEIVGNLTAAGYGTSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGD V G FIDVL+ D T++I+MVGEIGGSAEEEAA+F+K KP+V Sbjct: 176 VGLGGDRVVGLNFIDVLQEMEKDPETKAIIMVGEIGGSAEEEAAEFIKANI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AGK+APPG+ MGHAGA+I GKG E K+ A+ AG+ +A P ++ L E L Sbjct: 232 AYLAGKSAPPGKRMGHAGAIIERGKGTFEGKVKALNAAGVPVAELPFQVPDLLAEAL 288 >gi|325066868|ref|ZP_08125541.1| succinyl-CoA synthetase subunit alpha [Actinomyces oris K20] Length = 313 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 141/314 (44%), Positives = 195/314 (62%), Gaps = 24/314 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT---------- 50 MSI + + +V+VQG+TG G HT + +L T+VV G++P+K T Sbjct: 1 MSIFLTETDRVIVQGMTGSEGRKHTTR-MLSAGTKVVAGVNPRKAGTTVAFDVAPIGPGA 59 Query: 51 ----GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G V VPV+ TVAEAKE T A SV++VPP+ A A++E+++A + L+V ITEGIP Sbjct: 60 GEVQAGTVEVPVYGTVAEAKEATGAEVSVVFVPPAFAKGAVVEAVDAGVRLLVVITEGIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D ++A + ++IGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VADATWMRAYAAERGVQIIGPNCPGIISPARSNVGITPPDITGPGPLGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + S LG +T +GIGGDPV GT ID L F AD T +VM+GEIGG AEE AA + Sbjct: 180 MHELSD--LGFTTCIGIGGDPVVGTTHIDALAAFEADPDTRLVVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +++ KP+V +VAG TAP GRTMGHAGA++SG G AE K A++ AG+ + +P Sbjct: 238 IREH----MTKPVVAYVAGFTAPEGRTMGHAGAIVSGSSGTAEAKKIALEAAGVRVGRTP 293 Query: 287 ---ARIGRSLVELL 297 A I R L L Sbjct: 294 SQTAEIARELYRQL 307 >gi|300932902|ref|ZP_07148158.1| succinyl-CoA synthetase subunit alpha [Corynebacterium resistens DSM 45100] Length = 295 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 140/300 (46%), Positives = 205/300 (68%), Gaps = 10/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVF 59 M+I V+ ++K++VQG+TG G HT Q +L + +VGG++PKK G++ G +VPVF Sbjct: 1 MAIFVNSDSKIIVQGMTGSEGRKHT-QRMLNSGSNIVGGVNPKKAGTSVEFEGGKSVPVF 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VA+A + T AN SV++VP + A++E+IEAEIPL+VCITEG+PV D AR + Sbjct: 60 GSVADAVKETGANVSVVFVPAAFTKSAMVEAIEAEIPLVVCITEGVPVKDTAEFFARARQ 119 Query: 120 S-SSRLIGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 S +R+IGPNCPGI++P+ +GI+P KG +G++S+SGTLTY+ +++ LG Sbjct: 120 SGKTRIIGPNCPGIISPEQTNVGIIPAETAPNKGRIGLVSKSGTLTYQMMYELRD--LGF 177 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 STA+GIGGDP+ GT I+ +E F D T++I+M+GEIGG AEE AA+++ D K Sbjct: 178 STAIGIGGDPIIGTTHINAIEAFQEDPDTDAIIMIGEIGGDAEEFAAEYINDNV----TK 233 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+V ++AG TAP G+TMGHAGA++SGG G AE K A++ AG+ + +P L E + Sbjct: 234 PVVAYIAGFTAPEGKTMGHAGAIVSGGSGTAEGKKEALEAAGVKVGKTPTEAANLLREAV 293 >gi|255262162|ref|ZP_05341504.1| succinate-CoA ligase, alpha subunit subfamily [Thalassiobium sp. R2A62] gi|255104497|gb|EET47171.1| succinate-CoA ligase, alpha subunit subfamily [Thalassiobium sp. R2A62] Length = 292 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 137/301 (45%), Positives = 188/301 (62%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +++ T+V+VQG+TG+ FHT+ + Y V G + K G T VPVF Sbjct: 1 MSIYLNRETRVIVQGITGRMAQFHTKDMLEYGTNVVGGVVPGKGGETVH-----GVPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A AS+++VPP A D+I+E+ +A I VCIT+GIP DM++VK + + Sbjct: 56 TVKEAVEATQAEASLVFVPPPFAADSIMEAADAGIRYCVCITDGIPAQDMIQVKRYMMRY 115 Query: 121 SSR----LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L GPNC G ++P +GIMPG IF G+VGI+ RSGTL YEA Q + G+G Sbjct: 116 PKERRMVLTGPNCAGTISPGKAMLGIMPGHIFLPGNVGIVGRSGTLGYEAAAQLKERGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+L F D T I M+GEIGG E EAA ++++ Sbjct: 176 VSTSVGIGGDPINGSSFRDILAQFENDGDTHVIAMIGEIGGPQEAEAAAYIQEHV----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V +VAG TAP GRTMGHAGA+IS A +K+ + AG+ +A +PA IG ++ + Sbjct: 232 KPVVAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILTAAGVTVAENPAVIGETIASV 291 Query: 297 L 297 + Sbjct: 292 M 292 >gi|218885135|ref|YP_002434456.1| succinyl-CoA synthetase, subunit alpha [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756089|gb|ACL06988.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 709 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 131/290 (45%), Positives = 183/290 (63%), Gaps = 12/290 (4%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 +T+VLVQG+TGK H + Y T +V G+ P KG G VPV+ +V EA Sbjct: 423 DTQVLVQGITGKVAQRHVQLMQEY-GTHIVAGVTPFKGGQSVLG----VPVYDSVHEACR 477 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGP 127 +AS+I+VP A DA++E+ EIP VCITEGIP M+ + S +R+IGP Sbjct: 478 HHRIDASIIFVPAPFAPDAVMEAAAEEIPWAVCITEGIPQRAMLSALKNVPPSPTRVIGP 537 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 N PGI+ P + KIGIMPG +F G V I SRSGTLTYEA + S G+GQS G+GGD Sbjct: 538 NTPGIIVPGATKIGIMPGYVFTPGPVAIFSRSGTLTYEAAARLSAAGIGQSFCAGVGGDS 597 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 G++FI + E D+ATE+++++GE+GG+AEE+ A+++ G KP++GF+A +T Sbjct: 598 FIGSDFISLFECIRDDDATEAVLVLGEVGGTAEEDLARWVT---ATGFAKPVLGFIAART 654 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS----PARIGRSL 293 APPGR MGHAGA++ GG + K+ AM++AG + P P R+ R+L Sbjct: 655 APPGRRMGHAGAILDEATGGVDGKLQAMRDAGFAVCPDLASLPERVARAL 704 >gi|7272371|gb|AAA27504.2| succinyl-CoA synthetase alpha-subunit [Thermus aquaticus] Length = 288 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 151/281 (53%), Positives = 193/281 (68%), Gaps = 9/281 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ILV++ T+VLVQG+TG+ G FHT+Q + Y T++V G+ P KG T G VPV+ TV Sbjct: 2 ILVNRETRVLVQGITGREGQFHTKQMLDYG-TKIVAGVTPGKGGTEVLG----VPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA +AS+I+VP A DA +E+ A IPLIV ITEGIP LDMVR ++ S Sbjct: 57 KEAVAHHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIG NCPGI++ KIGIMPG +F++G VGI+SRSGTL +EA SQ GLG +T VG Sbjct: 117 RLIGGNCPGIISAHLPKIGIMPGHVFKRGRVGIISRSGTLRHEAAAALSQAGLGTTTTVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV+ F D+L LF D TE++V++GEIGGS EEEAA ++KD KKP+VGF Sbjct: 177 IGGDPVRRLTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKDHM----KKPVVGF 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 + G++AP G+ MGHAGA+I G G E K+ A EAGI +A Sbjct: 233 IGGRSAPKGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVA 273 >gi|297563043|ref|YP_003682017.1| succinyl-CoA synthetase, subunit alpha [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847491|gb|ADH69511.1| succinyl-CoA synthetase, alpha subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 312 Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 136/299 (45%), Positives = 195/299 (65%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I V+ +++VLVQG+TG GT HT + +L T +VGG++P+K VPVF Sbjct: 1 MAIFVNSDSRVLVQGMTGSEGTKHTRR-MLASGTTIVGGVNPRKAGQKVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV--KARLE 118 +VAE T A+ +VI+VPP + +A+ E+I+A I L V ITEGIPV D A+ + Sbjct: 60 SVAEGMAATGADVTVIFVPPKFSREAVFEAIDAGIGLAVVITEGIPVHDTAAFWAHAQAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPSDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA+F++D KP Sbjct: 178 SAVGIGGDPIIGTTHIDALAAFEADPDTDVIVMIGEIGGDAEERAAEFIRDNV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG+VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P+ R + +L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVKVGTTPSEAARMVRAVL 292 >gi|154148281|ref|YP_001406694.1| succinate-CoA ligase subunit alpha [Campylobacter hominis ATCC BAA-381] gi|153804290|gb|ABS51297.1| succinate-CoA ligase, alpha subunit subfamily [Campylobacter hominis ATCC BAA-381] Length = 291 Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 138/300 (46%), Positives = 184/300 (61%), Gaps = 11/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV KNT+V+V G TGK TFH+ + Y I ++ PVF Sbjct: 1 MSILVHKNTRVIVHGFTGKEATFHSGLCMAYGTN-----IVGGVVPGKGGKEHLGKPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T EA T A+ S+I+VP +++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TAKEAVASTRADTSLIFVPAKFVAESVIEAADAGIKLAVVITEHAPVKDMIEAKNYANKC 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSV--GILSRSGTLTYEAVFQTSQEGLGQS 178 +LIGPNCPGI++ D CK+GIMP SIF++ SV G++S+SGTLTYE Q EG G S Sbjct: 116 GMKLIGPNCPGIISSDECKLGIMPNSIFKRKSVNIGLISKSGTLTYEGANQILNEGYGIS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGD + G + ++L L AD T++IV++GEIGGS E +A + +K++ KP Sbjct: 176 TAVGIGGDSIIGLTYSEILPLLEADPDTKAIVIIGEIGGSLEIDACKVIKEKI----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 IV F+AG +AP G+ MGHAGA+ISG A K A+ E G+ + +PA IG L E+LG Sbjct: 232 IVAFIAGVSAPKGKRMGHAGAIISGESSTAAGKKKALSEVGVHVVDTPAHIGTKLKEILG 291 >gi|206604100|gb|ACI16481.1| alpha-succinyl coenzyme A synthetase [Histomonas meleagridis] Length = 308 Score = 245 bits (625), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 149/299 (49%), Positives = 204/299 (68%), Gaps = 8/299 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VD+NT+V+VQG+ G G H+ Y T+VV G+HPKK G +PVF +V Sbjct: 14 LFVDENTRVVVQGI-GNQGQSHSRLMREYG-TKVVAGVHPKKAGQIVAG----MPVFASV 67 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 +A E+T ANAS+I+VP SGA A+IE+ A + L+VCITE IP DM++VK L++ Sbjct: 68 KDAVEKTDANASLIFVPASGAAAAMIEAANAGVGLVVCITEHIPQHDMIKVKKVLKEKGV 127 Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 LIGPNCPGI+ P + CK+GI+P +I G +GI+SRSGTLTYEA + T+ GLGQST V Sbjct: 128 GLIGPNCPGIIQPRTHCKMGIIPTNIHTPGKIGIVSRSGTLTYEASYATTLAGLGQSTVV 187 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP G DV++ F D TE I+++GEIGG +EE+AA+++ ++KP+V Sbjct: 188 GIGGDPFAGQLHTDVVKRFAEDPHTEGIILIGEIGGQSEEDAAEWIAKN-HLTKEKPVVS 246 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPG+ MGHAGA+ISGGKG AE K A++ AG+ I+ P +G+ + E + L Sbjct: 247 FIAGATAPPGKRMGHAGAIISGGKGTAEGKYEALQAAGVRISRHPGNLGKFIFEEMKKL 305 >gi|94985193|ref|YP_604557.1| succinyl-CoA synthetase, alpha subunit [Deinococcus geothermalis DSM 11300] gi|94555474|gb|ABF45388.1| succinyl-CoA synthetase, alpha subunit [Deinococcus geothermalis DSM 11300] Length = 303 Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 144/295 (48%), Positives = 198/295 (67%), Gaps = 22/295 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M ILV+K+T+VLV G+TG+ G+ HT +A+ TQ+V G+ P KG G VPV+ Sbjct: 1 MGILVNKDTQVLVVGITGREGSNHT-RAMKEFGTQIVAGVTPGKGGQTHEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR----VKAR 116 +V EA+ + S+I+VPP+GA DA++ES A +PLIV ITEG+P +DM++ VKA Sbjct: 56 SVKEAQAEHRIDTSIIFVPPAGAADAVLESAHAGVPLIVLITEGVPTVDMMKAVQEVKA- 114 Query: 117 LEKSSS-------RLIGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVF 168 L++++ RLIG NCPG++T CK+GIMP I+ +KG VG++SRSGTLTYEA Sbjct: 115 LDRANRAEGGPGIRLIGGNCPGLVTSGECKVGIMPNRIYEQKGRVGLISRSGTLTYEAAK 174 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 GLG ST VGIGGDPV GT F DVL +F AD T+++V++GEIGG+ EE AA+ Sbjct: 175 LLLDAGLGTSTTVGIGGDPVIGTTFADVLPMFEADPETDAVVVIGEIGGADEEAAAE--- 231 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 KKP+V F++G++AP G+ MGHAGA+I G G E K+ A + AG+ +A Sbjct: 232 -YIAANMKKPVVAFISGRSAPKGKRMGHAGAIIMGDVGTPESKLAAFQAAGVPVA 285 >gi|126460263|ref|YP_001056541.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Pyrobaculum calidifontis JCM 11548] gi|126249984|gb|ABO09075.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Pyrobaculum calidifontis JCM 11548] Length = 293 Score = 244 bits (624), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 135/299 (45%), Positives = 191/299 (63%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV NT+V+VQG TG+ G+FH ++ + Y T+VV G+ P KG T G VPV+ Sbjct: 1 MTVLVSPNTRVVVQGATGREGSFHLQRMLEYG-TKVVAGVTPGKGGTTVHG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA R ANASV++VP A DA++E+++A I L+V ITE IP+ D +R Sbjct: 56 TVEEAVRRHGANASVVFVPAKFAPDAVLEAVDAGIELVVVITEHIPIHDTLRAVNYARVR 115 Query: 121 SSRLIGPNCPGILTPD-SCKIGIMPGSIFRK-GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPGI+ P K+GIMP +I++ G + ++SRSGTLTYE +Q + G G + Sbjct: 116 GVTVIGPNCPGIVAPPVRTKLGIMPNNIYQTPGKIAVVSRSGTLTYEISYQLVKAGFGIN 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 A+G+GGDP+ G + ++ D + IV++GE+GG AEE A+ + A KKP Sbjct: 176 IAIGVGGDPIVGLDLMEATVKVAEDPDVDGIVVIGEVGGDAEERLAKLYAEGAI---KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 IV +VAG+TAPPG+ MGHAGA++ G G A KI A K AGI +A +P + + L +LL Sbjct: 233 IVAYVAGRTAPPGKRMGHAGAIVMLGSGDARGKIEAFKAAGIPVAETPFEVPQLLAKLL 291 >gi|291295750|ref|YP_003507148.1| succinyl-CoA synthetase subunit alpha [Meiothermus ruber DSM 1279] gi|290470709|gb|ADD28128.1| succinyl-CoA synthetase, alpha subunit [Meiothermus ruber DSM 1279] Length = 290 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 147/284 (51%), Positives = 195/284 (68%), Gaps = 10/284 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+T+V+VQG+TG+ G FHTE A++ T+VV G+ P KG G VPV+ Sbjct: 1 MSILVNKDTQVIVQGITGREGAFHTE-AMMKAGTKVVAGVTPGKGGQTMLG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +AS+I+VP A DA +E+ A IPL+V ITEGIP LDMV+ A ++ Sbjct: 56 TVKEATAHHRVDASIIFVPAPAAADAALEAAHAGIPLVVLITEGIPTLDMVKAVAEIKAM 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + RLIG NCPG++TP+ CK+GIMP S+F+KG VG++SRSGT+TYE S G G ST Sbjct: 116 QNVRLIGGNCPGLITPEECKLGIMPASVFKKGRVGLISRSGTVTYETAKALSDAGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT F D+L LF D T ++V+ GEIGGS EE+AA ++K+ KKP+ Sbjct: 176 CIGIGGDPIIGTTFKDLLPLFNEDPETHAVVLCGEIGGSDEEDAAAYVKEH----MKKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 VGF+ G++AP G+ MGHAGA+I G G E K+ A EA I +A Sbjct: 232 VGFIGGRSAPKGKKMGHAGAIIMGSVGTPESKLAAFAEANIPVA 275 >gi|227833886|ref|YP_002835593.1| succinyl-CoA synthetase alpha subunit [Corynebacterium aurimucosum ATCC 700975] gi|262184892|ref|ZP_06044313.1| succinyl-CoA synthetase subunit alpha [Corynebacterium aurimucosum ATCC 700975] gi|227454902|gb|ACP33655.1| succinyl-CoA synthetase alpha subunit [Corynebacterium aurimucosum ATCC 700975] Length = 292 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 130/289 (44%), Positives = 188/289 (65%), Gaps = 8/289 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K+++++VQG+TG G HT + +L + +VGG++P+K +PVF Sbjct: 1 MSIFLNKDSRIIVQGMTGSEGMKHTRR-MLESGSNIVGGVNPRKAGERVDIDGREIPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA + T AN +VI+VP DA E+I A I L+V ITEGIPV D + A +S Sbjct: 60 SVREAMQATEANVTVIFVPAKFTKDAAEEAIRAGIELVVIITEGIPVKDTAELYALGRES 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +R+IGPNCPG+ TP GI+P G +G++S+SGTLTY+ +++ S +G ST Sbjct: 120 KTRIIGPNCPGLYTPGESNAGIIPAETAPNPGKIGLVSKSGTLTYQMMYELSD--IGFST 177 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT I +E F D TE+I+M+GEIGG AEE AA ++KD KP+ Sbjct: 178 CVGIGGDPIIGTTHISAIEAFQNDPDTEAIIMIGEIGGDAEEHAAAYIKDHV----TKPV 233 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + ++AG TAP G+TMGHAGA++SGG G AE K A++ AG+ + +P++ Sbjct: 234 IAYIAGFTAPEGKTMGHAGAIVSGGSGTAEGKKAALEAAGVKVGKTPSQ 282 >gi|291003959|ref|ZP_06561932.1| succinyl-CoA synthetase subunit alpha [Saccharopolyspora erythraea NRRL 2338] Length = 294 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 136/300 (45%), Positives = 195/300 (65%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++ N+KV+VQG+TG GT HT + +L T +VGG++ +K + VF Sbjct: 1 MAIFLNDNSKVIVQGITGSEGTKHTAR-MLRAGTNIVGGVNARKAGQVVEIEGKQLTVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA + T A+ SV++VPP A DA+IE+I+AEIPL V ITEGIPV D A + Sbjct: 60 SVQEAMKETGADVSVLFVPPKFAKDAVIEAIDAEIPLAVVITEGIPVHDSAYFWAHANAT 119 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R++GPNCPG+++P GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIVGPNCPGVISPGKSNAGIIPADITGPGKIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID L+ F D TE+IVM+GEIGG AEE AA ++K KP Sbjct: 178 TCVGIGGDPIIGTTHIDALQAFQDDPETEAIVMIGEIGGDAEERAADYIKANI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ + + E++G Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAKLMREVIG 293 >gi|154509658|ref|ZP_02045300.1| hypothetical protein ACTODO_02191 [Actinomyces odontolyticus ATCC 17982] gi|153799292|gb|EDN81712.1| hypothetical protein ACTODO_02191 [Actinomyces odontolyticus ATCC 17982] Length = 306 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 142/311 (45%), Positives = 196/311 (63%), Gaps = 21/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK--------------GS 46 M+I V+ +T+V+VQG+TG G HT Q +L T +VGG +P+K G+ Sbjct: 1 MTIFVNSDTRVIVQGMTGAEGRKHT-QRMLSAGTAIVGGTNPRKAGTTVTFDVQGYGPGA 59 Query: 47 TYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 T G V VPVF TVAEA+E T ANASVI+VPP+ A A +E+I+A I IV ITEGIP Sbjct: 60 DKVTDGQVEVPVFGTVAEAREATGANASVIFVPPAFAKGAALEAIDAGIETIVLITEGIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D V R + RLIGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VQDSTIVVERALAAGVRLIGPNCPGIISPGQANLGITPADITGPGRLGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ G +T +GIGGDPV GT ID L F AD T+ ++M+GEIGG AEE AA + Sbjct: 180 MYELRD--FGFTTCLGIGGDPVVGTTHIDALAAFEADPDTDLVIMIGEIGGDAEERAAAW 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +++ KP+V ++AG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IQEN----MTKPVVAYIAGFTAPEGKTMGHAGAIVSGSSGTAAAKAEALEAVGVRVGRTP 293 Query: 287 ARIGRSLVELL 297 ++ + E+L Sbjct: 294 SQTAQIAREIL 304 >gi|296118632|ref|ZP_06837210.1| succinyl-CoA synthetase subunit alpha [Corynebacterium ammoniagenes DSM 20306] gi|295968531|gb|EFG81778.1| succinyl-CoA synthetase subunit alpha [Corynebacterium ammoniagenes DSM 20306] Length = 302 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 136/299 (45%), Positives = 194/299 (64%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVF 59 M+I +D N+K++VQG+TG G HT Q +L + +VGG++PKK G T +PVF Sbjct: 1 MAIYLDSNSKIIVQGMTGSEGMKHT-QRMLGSGSNIVGGVNPKKAGETVSFETGEKIPVF 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EA + T AN SVI+VP A+ E+I A IPL + ITEG+PV D A ++ Sbjct: 60 GTVREAIQATGANVSVIFVPAKFTKAAVEEAIYANIPLAIVITEGVPVKDTAEFFALAKE 119 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S++R+IGPNCPGI+TP GI+P GS+G++S+SGTLTY+ +++ S +G S Sbjct: 120 SNTRIIGPNCPGIITPGQSNAGIIPAETAPEPGSIGLVSKSGTLTYQMMYELSD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT I +E F D T++I+M+GEIGG AEE AA ++ + A KP Sbjct: 178 TCVGIGGDPIIGTTHIAAIEEFQKDPDTKAIMMIGEIGGDAEEYAANYIAEYA----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +V ++AG TAP G+TMGHAGA++SG G A K A++ AG+ + +P++ + + E L Sbjct: 234 VVAYIAGFTAPEGKTMGHAGAIVSGSSGTAAGKKRALEAAGVRVGRTPSQAAQLMREAL 292 >gi|55377355|ref|YP_135205.1| succinyl-CoA synthetase subunit alpha [Haloarcula marismortui ATCC 43049] gi|55230080|gb|AAV45499.1| succinyl-CoA synthetase alpha chain [Haloarcula marismortui ATCC 43049] Length = 290 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 151/299 (50%), Positives = 209/299 (69%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVD++T+V+VQG+TG G FHTEQ + Y T VV G P +G G VPVF Sbjct: 1 MSVLVDEDTRVVVQGITGGEGKFHTEQMLEY-GTNVVAGAVPGRGGQEVAG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMVRVKARLEK 119 TV A ANA+V++VPP+ AGDA E+++A+ I L+V ITEGIP DM RV +L++ Sbjct: 56 TVQGAAREADANAAVVFVPPAFAGDACFEALDAKGIDLVVAITEGIPTQDMARVYRKLQE 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + + L+GPNCPG++TP K+GI+PG+IF G+VG++SRSGTLTY+ V + G+GQST Sbjct: 116 TDTHLVGPNCPGVITPGVAKLGILPGNIFSSGNVGLVSRSGTLTYQVVDNLTNRGIGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDP+ GT+FI LE F AD T ++VM GEIGG EEEAA+F+ + P+ Sbjct: 176 AIGIGGDPIIGTDFIGALEQFEADPDTHAVVMCGEIGGEDEEEAARFIGEH----MDTPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G A+ KI A+++ G+ + +P + + +LL Sbjct: 232 AGFIAGRTAPPGKRMGHAGAIVSGSGTGTAQSKITALEDNGVPVGDTPEEVADHVEDLL 290 >gi|78042669|ref|YP_359762.1| succinyl-CoA synthetase subunit alpha [Carboxydothermus hydrogenoformans Z-2901] gi|77994784|gb|ABB13683.1| succinyl-CoA synthetase, alpha subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 289 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 128/289 (44%), Positives = 191/289 (66%), Gaps = 10/289 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I++ + T+++VQG+TG G FHT + + Y ++VV G+ P KG T G VPVF Sbjct: 1 MAIIITEETRIVVQGITGNQGRFHTGKMLEYG-SKVVAGVSPGKGGTEVLG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T AN S++++P DA +E++EA I IV I+E +P+ D +++ E Sbjct: 56 TVLDAVKNTGANTSILFIPAPFVLDAALEAMEAGIKTIVIISEHVPLHDALKIMRVAEAY 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++GPN G+++P K+GIMP +I++KG VGI++RSGTL+Y+ ++ ++ GLGQST Sbjct: 116 GVTVVGPNTFGVISPGIAKVGIMPNTIYQKGPVGIVARSGTLSYQIAYELTRAGLGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGD + G +V+ DE T+ IV+VGEIGG+AEEEAA+ + R KP+V Sbjct: 176 VGLGGDRIVGLSLAEVILSLARDEETQGIVVVGEIGGTAEEEAAEVI-----RHINKPVV 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 F+AGKTAPPG+ MGHAGA+I G+G + KI+A+ AG IA P + Sbjct: 231 AFIAGKTAPPGKRMGHAGAIIERGRGTYQSKIDALWNAGALIAEVPWEV 279 >gi|694122|gb|AAA62655.1| malate thiokinase [Methylobacterium extorquens AM1] Length = 260 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 130/261 (49%), Positives = 173/261 (66%), Gaps = 13/261 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T +LVQG+TG GTFH ++ I Y + VVGG+ P KG G VPVF Sbjct: 1 MSILIDEKTPILVQGITGDKGTFHAKEMIAY-GSNVVGGVTPGKGGKTHCG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E T A S+ +V P A DAI+E+ +A + L+ IT+GIP DM+RVK L + Sbjct: 56 TVKEAVEATGATTSITFVAPPFAADAIMEAADAGLKLVCSITDGIPAQDMMRVKRYLRRY 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + ++GPNC GI++P +GIMPG I+ G VG++SRSGTL YEA Q + G+G Sbjct: 116 PKEKRTMVVGPNCAGIISPGKSMLGIMPGHIYLPGKVGVISRSGTLGYEAAAQMKELGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L LF D TE+++M+GEIGG E EA+ ++K+ Sbjct: 176 ISTSVGIGGDPINGSSFLDHLALFEQDPETEAVLMIGEIGGPQEAEASAWIKENF----S 231 Query: 237 KPIVGFVAGKTAPPGRTMGHA 257 KP++GFVAG TAP GR MGHA Sbjct: 232 KPVIGFVAGLTAPKGRRMGHA 252 >gi|325303392|tpg|DAA34114.1| TPA_exp: succinyl-CoA synthetase small subunit [Amblyomma variegatum] Length = 228 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 121/206 (58%), Positives = 157/206 (76%), Gaps = 6/206 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+ QG TGK GTFH++QA+ Y T++V G+ P KG G +PVF + Sbjct: 28 ALKINKDTKVICQGFTGKQGTFHSKQALEY-GTRLVAGVSPGKGGQTHLG----LPVFNS 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA+ +T A+ASVIYVP GA AI+E++EAEIPL+VCITEGIP DMVRVK +L ++ Sbjct: 83 VKEARAQTGADASVIYVPAPGAAKAILEAMEAEIPLVVCITEGIPQQDMVRVKNQLVKQD 142 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 143 KTRLVGPNCPGIIKPEECKIGIMPGHIHQKGKIGIVSRSGTLTYEAVHQTTQVGLGQSLC 202 Query: 181 VGIGGDPVKGTEFIDVLELFLADEAT 206 VGIGGDP G +FID +++FL D T Sbjct: 203 VGIGGDPFNGNKFIDCIDIFLGDPDT 228 >gi|237651905|gb|ACR08641.1| succinyl coenzyme A synthetase alpha subunit [Drosophila silvestris] Length = 230 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 119/197 (60%), Positives = 155/197 (78%), Gaps = 6/197 (3%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF +VA+AK+ Sbjct: 37 DSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFASVADAKK 91 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKSSSRLIG 126 T +A+VIYVPP GA AI+E+++AEIPLIVCITEG+P DMV+VK A + + SRL+G Sbjct: 92 ATDPHATVIYVPPPGAAAAIMEALDAEIPLIVCITEGVPQHDMVKVKHALISQDKSRLVG 151 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ VGIGGD Sbjct: 152 PNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLCVGIGGD 211 Query: 187 PVKGTEFIDVLELFLAD 203 P GT+FID LE+FL D Sbjct: 212 PFNGTDFIDCLEVFLKD 228 >gi|254470920|ref|ZP_05084323.1| succinyl-CoA ligase (GDP-forming) subunit alpha [Pseudovibrio sp. JE062] gi|211960062|gb|EEA95259.1| succinyl-CoA ligase (GDP-forming) subunit alpha [Pseudovibrio sp. JE062] Length = 213 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 127/177 (71%), Positives = 151/177 (85%), Gaps = 3/177 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGG---NVNVP 57 MSILVDK+TKV+VQGLTGK GTFHTEQA+ Y T++V G+HPKKG W+ G +P Sbjct: 1 MSILVDKDTKVIVQGLTGKTGTFHTEQALAYFGTKMVAGVHPKKGGETWSSGLDSAAELP 60 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 +F +V EAKE T ANASV+YVPP+GA AIIE+I+AEIP IVCITEGIPV DMV+VKARL Sbjct: 61 IFASVKEAKEATGANASVVYVPPAGAAAAIIEAIDAEIPFIVCITEGIPVADMVKVKARL 120 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + S+SRL+GPNCPG+LTP+ CKIGIMPGSIF+KG+VGI+SRSGTLTYEAVFQTSQ+ Sbjct: 121 DNSNSRLLGPNCPGVLTPEECKIGIMPGSIFKKGNVGIVSRSGTLTYEAVFQTSQKA 177 >gi|293189083|ref|ZP_06607809.1| succinyl-CoA synthetase subunit alpha [Actinomyces odontolyticus F0309] gi|292821928|gb|EFF80861.1| succinyl-CoA synthetase subunit alpha [Actinomyces odontolyticus F0309] Length = 306 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 142/311 (45%), Positives = 195/311 (62%), Gaps = 21/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT---------- 50 M+I V+ +T+V+VQG+TG G HT Q +L T +VGG +P+K T T Sbjct: 1 MTIFVNSDTRVIVQGMTGAEGRKHT-QRMLSAGTAIVGGTNPRKAGTTVTFDVQGYGPGV 59 Query: 51 ----GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G V VPVF TVAEA+E T ANASVI+VPP+ A A +E+I+A I IV ITEGIP Sbjct: 60 DKVTDGQVEVPVFGTVAEAREATGANASVIFVPPAFAKGAALEAIDAGIETIVLITEGIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D V R + RLIGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VQDSTIVVERALAAGVRLIGPNCPGIISPGQANLGITPADITGPGRLGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ G +T +GIGGDPV GT ID L F AD T+ ++M+GEIGG AEE AA + Sbjct: 180 MYELRD--FGFTTCLGIGGDPVVGTTHIDALAAFEADPDTDLVIMIGEIGGDAEERAAAW 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +++ KP+V ++AG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IQEN----MTKPVVAYIAGFTAPEGKTMGHAGAIVSGSSGTAAAKAEALEAVGVRVGRTP 293 Query: 287 ARIGRSLVELL 297 ++ + E+L Sbjct: 294 SQTAQIAREIL 304 >gi|239927748|ref|ZP_04684701.1| succinyl-CoA synthetase subunit alpha [Streptomyces ghanaensis ATCC 14672] gi|291436088|ref|ZP_06575478.1| succinyl-coa synthetase alpha chain [Streptomyces ghanaensis ATCC 14672] gi|291338983|gb|EFE65939.1| succinyl-coa synthetase alpha chain [Streptomyces ghanaensis ATCC 14672] Length = 305 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 135/308 (43%), Positives = 188/308 (61%), Gaps = 18/308 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT---------- 50 M+I + K ++VLVQG+TG G HT + ++ T VVGG++P+K Sbjct: 1 MAIHLTKESRVLVQGMTGGEGMKHTRR-MIAAGTNVVGGVNPRKAGRRVDFDVPQSPNGP 59 Query: 51 -GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 G VPVF +VAE + T A+ +V++VPP+ A A++E+ +A I L V ITEGIPV D Sbjct: 60 GGAPTAVPVFGSVAEGMDATGADVTVVFVPPAFAKHAVVEAADAGIGLAVVITEGIPVHD 119 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 V A +R+IGPNCPG++TP GI+P I G +G++S+SGTLTY+ + + Sbjct: 120 SVAFLAHARHKGTRVIGPNCPGLITPGQSNAGIIPADIAEPGRIGLVSKSGTLTYQLMHE 179 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 G ST VGIGGDPV GT ID L F D T+ IV++GEIGG AEE AA +++D Sbjct: 180 LRDTGF--STCVGIGGDPVVGTTHIDCLAAFQDDPDTDLIVLIGEIGGDAEERAAAYIRD 237 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KP+VG++AG TAP GRTMGHAGA++SG G A+ K A++ AG+ + +P Sbjct: 238 HV----TKPVVGYIAGFTAPEGRTMGHAGAIVSGSSGTAQAKKEALEAAGVRVGRTPTET 293 Query: 290 GRSLVELL 297 R ++ L Sbjct: 294 ARQVLAAL 301 >gi|291456794|ref|ZP_06596184.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium breve DSM 20213] gi|291382071|gb|EFE89589.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium breve DSM 20213] Length = 303 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 134/303 (44%), Positives = 199/303 (65%), Gaps = 15/303 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNVNV 56 + V+ +T V+VQG+TG G HT + +L T +VGG++P+K T T G +V+V Sbjct: 2 LFVEDSTPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNPRKAGTSVTFPAAKNGTDVDV 60 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF T EA+E T A ASV++VPP A A++E+IEA I LIV ITEGIPV D Sbjct: 61 PVFATCDEAREATGAKASVVFVPPKFAKSAVVEAIEAGIELIVIITEGIPVADSAYFVEL 120 Query: 117 LEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + R+IGPNCPG++T + +GI+P I +G +G++S+SGTLTY+ + + S Sbjct: 121 ALRKGVRIIGPNCPGLITLGNPGVNLGIIPDDIVGRGPLGLVSKSGTLTYQLMGELSD-- 178 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G + +G GGDP+ GT ++ L+ F AD T++++M+GEIGG AE++AA + AK Sbjct: 179 IGFTACLGAGGDPIVGTTLLEALQAFEADPDTKAVMMIGEIGGFAEQDAAAW----AKEH 234 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK NA++ AGI + +P + + + Sbjct: 235 MTKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKNALEAAGIPVGKTPGQAAQIMR 294 Query: 295 ELL 297 ++L Sbjct: 295 DVL 297 >gi|289427572|ref|ZP_06429284.1| succinyl-CoA synthetase, alpha subunit [Propionibacterium acnes J165] gi|289159063|gb|EFD07255.1| succinyl-CoA synthetase, alpha subunit [Propionibacterium acnes J165] gi|313808726|gb|EFS47180.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL087PA2] gi|313817906|gb|EFS55620.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL046PA2] gi|313819818|gb|EFS57532.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL036PA1] gi|313823308|gb|EFS61022.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL036PA2] gi|313824783|gb|EFS62497.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL063PA1] gi|314925812|gb|EFS89643.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL036PA3] gi|314960755|gb|EFT04856.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL002PA2] gi|314979798|gb|EFT23892.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL072PA2] gi|314986168|gb|EFT30260.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL005PA2] gi|314988780|gb|EFT32871.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL005PA3] gi|315083286|gb|EFT55262.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL027PA2] gi|315086941|gb|EFT58917.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL002PA3] gi|315090032|gb|EFT62008.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL072PA1] gi|327325062|gb|EGE66868.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL096PA3] gi|327449260|gb|EGE95914.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL013PA2] gi|328756395|gb|EGF70011.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL020PA1] gi|332676153|gb|AEE72969.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Propionibacterium acnes 266] Length = 297 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 142/302 (47%), Positives = 198/302 (65%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVF 59 M+I++D+N+K++VQG+TG G HT Q +L T VVGG++P+K G+T G VPV+ Sbjct: 1 MAIILDQNSKIIVQGMTGSEGMKHT-QRMLNSGTAVVGGVNPRKAGTTVDFNGGTTVPVY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V +A E T AN SVI+VP A++E+IEAE+PL+VCITEG+PV D ++ Sbjct: 60 GSVKQAVEATGANVSVIFVPAKFTKSAVMEAIEAEMPLVVCITEGVPVKDTAEFFTAAQR 119 Query: 120 S-SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S +R+IGPNCPGI++P GI+P I G VG++S+SGTLTY+ +++ LG S Sbjct: 120 SGKTRIIGPNCPGIISPGKSNAGIVPADITGPGRVGLVSKSGTLTYQLMYEVRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA+++ + KP Sbjct: 178 TAIGIGGDPIIGTTHIDALQAFQDDPETDIIVMIGEIGGDAEERAAKYISEHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SG G A K A+ G+ + +P R E + Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALDAVGVRVGKTPTETARLAHEAME 293 Query: 299 SL 300 SL Sbjct: 294 SL 295 >gi|183601651|ref|ZP_02963021.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium animalis subsp. lactis HN019] gi|219683815|ref|YP_002470198.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium animalis subsp. lactis AD011] gi|241190851|ref|YP_002968245.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196257|ref|YP_002969812.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183219257|gb|EDT89898.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium animalis subsp. lactis HN019] gi|219621465|gb|ACL29622.1| succinyl-CoA ligase [Bifidobacterium animalis subsp. lactis AD011] gi|240249243|gb|ACS46183.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250811|gb|ACS47750.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178590|gb|ADC85836.1| Succinyl-CoA synthetase alpha chain [Bifidobacterium animalis subsp. lactis BB-12] gi|295793840|gb|ADG33375.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium animalis subsp. lactis V9] Length = 305 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 133/310 (42%), Positives = 202/310 (65%), Gaps = 18/310 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTY--WTGGN---VN 55 M++ ++ + V+VQG+TG G HT + +L T +VGG++P+K T + GN V Sbjct: 1 MNVFIEDDAPVIVQGITGHQGMTHTAR-MLKANTNIVGGVNPRKAGTTLEFEDGNGVPVR 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF T EAK+ T A ASV++VPP A DA++E++EA ++V ITEGIPV D Sbjct: 60 VPVFATCQEAKDITGAKASVVFVPPRFAKDAVVEAVEAGFEVVVVITEGIPVADSAYFVE 119 Query: 116 RLEKSSSRLIGPNCPGILT-PDS-----CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 R++GPNCPG+LT P+S +GI+P I +G +G++S+SGTLTY+ + + Sbjct: 120 LALSKGVRIVGPNCPGLLTLPESTDTHGVNLGIIPDGIVSRGPLGLVSKSGTLTYQLMGE 179 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 S +G + +G GGDP+ GT ++ LE F AD T++++M+GEIGG+AE++AAQ+ Sbjct: 180 LSD--IGFTACLGAGGDPIVGTTLLEALEAFEADPNTKAVMMIGEIGGNAEQDAAQW--- 234 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 A + KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK A++ AGI + +P+ Sbjct: 235 -AAKNMTKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKQAALEAAGIRVGRTPSEA 293 Query: 290 GRSLVELLGS 299 + + E+L + Sbjct: 294 AQIMREVLSA 303 >gi|319947697|ref|ZP_08021911.1| succinyl-CoA synthetase subunit alpha [Dietzia cinnamea P4] gi|319438647|gb|EFV93553.1| succinyl-CoA synthetase subunit alpha [Dietzia cinnamea P4] Length = 300 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 144/307 (46%), Positives = 205/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT + +L TQ+VGG++ +K T + G ++ Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHTAR-MLAAGTQIVGGVNARKAGTTVSHKDRDGNDIE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV-K 114 +PVF +V EA E T A+ ++++VPP DAIIE+++AEIPL V ITEG PVLD Sbjct: 60 LPVFGSVKEAMEATGADTTILFVPPPFTKDAIIEAVDAEIPLAVVITEGAPVLDTATAWN 119 Query: 115 ARLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 L K +R+IGPNCPGI+TP +GI P +I KG VG++S+SGTLTY+ +++ + Sbjct: 120 YNLAKGGKTRIIGPNCPGIITPGESLVGITPANIAGKGPVGLVSKSGTLTYQMMYELADY 179 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDP+ GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 180 GF--STAIGIGGDPIIGTTHIDCIEAFENDPETKVIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAQLA 293 Query: 294 VELLGSL 300 E+L ++ Sbjct: 294 KEILDAM 300 >gi|111220618|ref|YP_711412.1| succinyl-CoA synthetase subunit alpha [Frankia alni ACN14a] gi|111148150|emb|CAJ59819.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Frankia alni ACN14a] Length = 290 Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 142/301 (47%), Positives = 201/301 (66%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +D+N++++VQG+TG GT HT++ +L T VV G++P+K G VPVF Sbjct: 1 MAIWLDENSRIVVQGITGSEGTKHTKR-MLAAGTNVVAGVNPRKVGQQVEG----VPVFG 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 +VA+A E+ AN SVI+VPP DA IE+I+A IPL V ITEG+PV D A + K Sbjct: 56 SVADAIEQAGANVSVIFVPPKFTKDAAIEAIDAAIPLAVVITEGVPVHDTTEFWAYGQSK 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++R+IGPNCPGI +P GI+P I G +G++S+SGTLTY+ +++ + G ST Sbjct: 116 GTTRIIGPNCPGIASPGLSNAGIIPADITPGGRIGLVSKSGTLTYQMMYELRE--FGFST 173 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPV GT ID L+ F AD T++IVM+GEIGG AEE AA ++ KP+ Sbjct: 174 CVGIGGDPVIGTTHIDALDAFQADPGTDAIVMIGEIGGDAEERAAAHIEAHVT----KPV 229 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG+VAG TAP G+TMGHAGA++SG G A+ K A+++AG+ + +P+ R + +++ S Sbjct: 230 VGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEKAGVRVGKTPSETARLMADIMRS 289 Query: 300 L 300 L Sbjct: 290 L 290 >gi|156936880|ref|YP_001434676.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ignicoccus hospitalis KIN4/I] gi|156565864|gb|ABU81269.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ignicoccus hospitalis KIN4/I] Length = 296 Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 153/302 (50%), Positives = 204/302 (67%), Gaps = 11/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M +LVD+NT+V+VQG+TG+ G FH EQ + Y T+VV G+ P KG G VPV+ Sbjct: 1 MVVLVDENTRVVVQGITGRYGKFHAEQMMKYG-TKVVAGVTPGKGGQEVLG----VPVYD 55 Query: 61 TVAEAKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EAKE N S+I+VP GA DAIIE+ +A + LIV ITEGIPV D +R Sbjct: 56 TVKEAKENHPEINTSIIFVPAGGAADAIIEAADAGLDLIVVITEGIPVHDSMRAIRYARS 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S ++GPNCPG+++P K+GIMP F G VGI+SRSGTLTYE +Q S+ G+GQST Sbjct: 116 KGSTVVGPNCPGVISPGKAKVGIMPEKYFVPGRVGIVSRSGTLTYEIAYQLSKRGIGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKP 238 A+GIGGDP+ G + ++ ++L D T+ IV++GEIGG AEE A + KRG +KP Sbjct: 176 AIGIGGDPIIGLDTVEAVKLMDKDPETDLIVVIGEIGGDAEERLAAAI----KRGEIEKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG+TAPPG+ MGHAGA+IS G G AE K+ A +EAG+ +A P+++ +VE L Sbjct: 232 VVAYVAGRTAPPGKRMGHAGAIISMGAGTAESKVRAFREAGVPVADIPSQVPDLVVEKLK 291 Query: 299 SL 300 L Sbjct: 292 EL 293 >gi|311744693|ref|ZP_07718490.1| succinyl-CoA synthetase subunit alpha [Aeromicrobium marinum DSM 15272] gi|311312002|gb|EFQ81922.1| succinyl-CoA synthetase subunit alpha [Aeromicrobium marinum DSM 15272] Length = 298 Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 141/305 (46%), Positives = 202/305 (66%), Gaps = 12/305 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTY-----WTGGNVN 55 MSI ++ +KV+VQG+TG G+ HT + +L TQVVGG++ +K T G V Sbjct: 1 MSIFLNAQSKVIVQGITGGEGSKHTAR-MLAAGTQVVGGVNARKAGTTVEHTDADGATVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA + T A+ SV++VPP+ DA++E+I+AEI L+V ITEG+PV D A Sbjct: 60 LPVFGSVAEAMKETGADVSVVFVPPAFTQDAVVEAIDAEIGLLVIITEGVPVQDSAEFWA 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 + +R+IGPNCPGI+TP GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YAQGKKTRIIGPNCPGIITPGEALAGITPATISGSGPIGLVSKSGTLTYQMMFELRD--F 177 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G +TA+GIGGDP+ GT ID LE F AD T++IVM+GEIGG AEE+AA +++ Sbjct: 178 GFTTAIGIGGDPIIGTTHIDALEAFEADPDTKAIVMIGEIGGDAEEKAAAYIQAHV---- 233 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VG+VAG TAP G+TMGHAGA+++ G G A+ K A++ AG+ + +P+ + E Sbjct: 234 TKPVVGYVAGFTAPEGKTMGHAGAIVADGAGTAQGKKEALEAAGVKVGKTPSETAELMRE 293 Query: 296 LLGSL 300 +L L Sbjct: 294 ILQGL 298 >gi|306822730|ref|ZP_07456108.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium dentium ATCC 27679] gi|309800809|ref|ZP_07694941.1| succinyl-CoA synthetase, alpha subunit [Bifidobacterium dentium JCVIHMP022] gi|304554275|gb|EFM42184.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium dentium ATCC 27679] gi|308222345|gb|EFO78625.1| succinyl-CoA synthetase, alpha subunit [Bifidobacterium dentium JCVIHMP022] Length = 307 Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 132/311 (42%), Positives = 196/311 (63%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKG------STYWTGGNV 54 M++ ++ V+VQG+TG G HT + +L T +VGG++ +K +G + Sbjct: 1 MTLFIEDGAPVIVQGMTGHQGKTHTAR-MLKAGTNIVGGVNARKAGIDVVFHDARSGEDA 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + V+ AEAKE T A ASV++VPP A DA++E+IEA I LIV ITEGIPV D Sbjct: 60 TIHVYANCAEAKEATGAKASVVFVPPRFAKDAVVEAIEAGIELIVVITEGIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGILT------PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R++GPNCPG+LT + C +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALRKGVRIVGPNCPGLLTLPSNEDANGCNLGIIPDGIVSRGPLGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G GGDP+ GT + LE F DEAT+++VM+GEIGGSAE++AA++ Sbjct: 180 ELSD--IGFTACLGAGGDPIVGTTLQEALEAFENDEATKAVVMIGEIGGSAEQDAARW-- 235 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 A KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK NA++ GI + +P + Sbjct: 236 --ASEHMTKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKNALEAVGIRVGRTPGQ 293 Query: 289 IGRSLVELLGS 299 + E+L + Sbjct: 294 TAEIMREVLAA 304 >gi|301057637|ref|ZP_07198715.1| succinyl-CoA synthetase, alpha subunit [delta proteobacterium NaphS2] gi|300448251|gb|EFK11938.1| succinyl-CoA synthetase, alpha subunit [delta proteobacterium NaphS2] Length = 290 Score = 241 bits (615), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 129/289 (44%), Positives = 184/289 (63%), Gaps = 9/289 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +D +T+V+VQG+TGK G+ T+ + Y T VVGG+ P KG G +PVF Sbjct: 1 MSIFLDDHTRVIVQGITGKIGSVQTKWMLEYG-TSVVGGVTPGKGGKTVQG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA + T ANASV +VP DA E+++A I LIV + E +PV D+++++A LE Sbjct: 56 SVAEAAKETGANASVFFVPAPFVLDAFYETVDAGIELIVIVPEHVPVHDVMKMRAYLEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +GP PGIL P K+GIMP S+F G GI+SRSGTL+YE S++ +GQST Sbjct: 116 DLVALGPTTPGILVPGKGKMGIMPASLFAPGRAGIISRSGTLSYEFAGILSEKNVGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+G DPV T D+L F D+ T+ +++VGE+GG EE+AA+F+ KKP+ Sbjct: 176 VGMGADPVVLTNLSDILREFEKDDETKGVIIVGEVGGEQEEQAAEFISTR----MKKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 ++AG+ +PPG+ MGHAGA++ G G E K A++ AG+ + SP + Sbjct: 232 AYIAGRFSPPGKRMGHAGAIVRGSAGTFEGKCEALQAAGVTVLDSPVEV 280 >gi|323307188|gb|EGA60471.1| Lsc1p [Saccharomyces cerevisiae FostersO] Length = 271 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 127/249 (51%), Positives = 168/249 (67%), Gaps = 5/249 (2%) Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF +V +A + T A AS I+VPP A AI ESIEAEIPL VCITEGIP DM+ + Sbjct: 22 PVFASVKDAIKETGATASAIFVPPPIAAAAIKESIEAEIPLAVCITEGIPQHDMLYIAEM 81 Query: 117 LE-KSSSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 L+ + +RL+GPNCPGI+ P + +IGI P IF+ G +GI+SRSGTLTYEAV QT++ Sbjct: 82 LQTQDKTRLVGPNCPGIINPATKVRIGIQPPKIFQAGKIGIISRSGTLTYEAVQQTTKTD 141 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKR 233 LGQS +G+GGD GT+FID L+LFL DE TE I+M+GEIGG AE EAAQFLK+ R Sbjct: 142 LGQSLVIGMGGDAFPGTDFIDALKLFLEDETTEGIIMLGEIGGKAEIEAAQFLKEYNFSR 201 Query: 234 GRKKPIVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 + P+ F+AG A G MGH+GA++ G AE K A+++ G+ + SP +G+ Sbjct: 202 SKPMPVASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKKALRDVGVAVVESPGYLGQ 261 Query: 292 SLVELLGSL 300 +L++ Sbjct: 262 ALLDQFAKF 270 >gi|171742919|ref|ZP_02918726.1| hypothetical protein BIFDEN_02036 [Bifidobacterium dentium ATCC 27678] gi|171278533|gb|EDT46194.1| hypothetical protein BIFDEN_02036 [Bifidobacterium dentium ATCC 27678] Length = 307 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 132/311 (42%), Positives = 196/311 (63%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGS------TYWTGGNV 54 M++ ++ V+VQG+TG G HT + +L T +VGG++ +K +G + Sbjct: 1 MTLFIEDGAPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNARKAGIDVVFPDARSGEDA 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + V+ AEAKE T A ASV++VPP A DA++E+IEA I LIV ITEGIPV D Sbjct: 60 TIHVYANCAEAKEATGAKASVVFVPPRFAKDAVVEAIEAGIELIVVITEGIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGILT------PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R++GPNCPG+LT + C +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALRKGVRIVGPNCPGLLTLPSNEDANGCNLGIIPDGIVSRGPLGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G GGDP+ GT + LE F DEAT+++VM+GEIGGSAE++AA++ Sbjct: 180 ELSD--IGFTACLGAGGDPIVGTTLQEALEAFENDEATKAVVMIGEIGGSAEQDAAKW-- 235 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 A KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK NA++ GI + +P + Sbjct: 236 --ASEHMTKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKNALEAVGIRVGRTPGQ 293 Query: 289 IGRSLVELLGS 299 + E+L + Sbjct: 294 TAEIMREVLAA 304 >gi|119962638|ref|YP_946833.1| succinyl-CoA synthetase subunit alpha [Arthrobacter aurescens TC1] gi|119949497|gb|ABM08408.1| succinyl-CoA synthetase, alpha subunit [Arthrobacter aurescens TC1] Length = 300 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 143/307 (46%), Positives = 201/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K++KV+VQG+TG GT HT +L T +VGG++ +K T G+ + VF Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHT-ALMLKAGTNIVGGVNARKAGTTVLHGDKEINVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 TV EA T A+ S+++VPP+ DA++E+IEA I L+V ITEG+PV D A + Sbjct: 60 TVKEAIAETGADVSIVFVPPAFTKDAVVEAIEAGIGLVVVITEGVPVQDSAEFWALAQSK 119 Query: 119 -----KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 K +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 VDADGKQITRIIGPNCPGIITPGEALVGITPANITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDP+ GT ID L F AD T++IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPIIGTTHIDALAAFEADPETKAIVMIGEIGGDAEERAADFIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + L Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAKLL 293 Query: 294 VELLGSL 300 E+ +L Sbjct: 294 REVYATL 300 >gi|86739365|ref|YP_479765.1| succinyl-CoA synthetase subunit alpha [Frankia sp. CcI3] gi|86566227|gb|ABD10036.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Frankia sp. CcI3] Length = 290 Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 140/301 (46%), Positives = 201/301 (66%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +D+N++V+VQG+TG G+ HT + +L T VV G++ +K G VPVF Sbjct: 1 MAIWLDENSRVVVQGITGSEGSKHTRR-MLAAGTNVVAGVNARKVGQQVEG----VPVFG 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA-RLEK 119 +VA+A +T AN SVI+VPP+ DA IE+I+A IPL V ITEG+P+ D A K Sbjct: 56 SVADAMAQTGANVSVIFVPPAFTKDAAIEAIDAAIPLAVVITEGVPIHDTTEFFAYSRSK 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +++R+IGPNCPGI +P GI+P I G +G++S+SGTLTY+ +++ + G ST Sbjct: 116 ATTRIIGPNCPGIASPGLSNAGIIPADITPGGRIGLVSKSGTLTYQMMYELRE--FGFST 173 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPV GT ID L+ F AD T++IVM+GEIGG AEE AA +++ KP+ Sbjct: 174 CVGIGGDPVIGTTHIDALDAFQADPNTDAIVMIGEIGGDAEERAAAHIEENV----TKPV 229 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG+VAG TAP G+TMGHAGA++SG G A+ K A+++AG+ + +P+ R + +++ S Sbjct: 230 VGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEKAGVRVGKTPSETARLMADIMRS 289 Query: 300 L 300 L Sbjct: 290 L 290 >gi|283456059|ref|YP_003360623.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium dentium Bd1] gi|283102693|gb|ADB09799.1| Succinyl-CoA synthetase subunit alpha [Bifidobacterium dentium Bd1] Length = 307 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 132/311 (42%), Positives = 196/311 (63%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGS------TYWTGGNV 54 M++ ++ V+VQG+TG G HT + +L T +VGG++ +K +G + Sbjct: 1 MTLFIEDGAPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNARKAGIDVVFPDARSGEDA 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + V+ AEAKE T A ASV++VPP A DA++E+IEA I LIV ITEGIPV D Sbjct: 60 TIHVYANCAEAKEATGAKASVVFVPPRFAKDAVVEAIEAGIELIVVITEGIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGILT------PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R++GPNCPG+LT + C +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALRKGVRIVGPNCPGLLTLPSNEDANGCNLGIIPDGIVSRGPLGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G GGDP+ GT + LE F DEAT+++VM+GEIGGSAE++AA++ Sbjct: 180 ELSD--IGFTACLGAGGDPIVGTTLQEALEAFENDEATKAVVMIGEIGGSAEQDAAKW-- 235 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 A KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK NA++ GI + +P + Sbjct: 236 --ASEHMTKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKNALEAIGIRVGRTPGQ 293 Query: 289 IGRSLVELLGS 299 + E+L + Sbjct: 294 TAEIMREVLAA 304 >gi|167628506|ref|YP_001679005.1| succinyl-coa synthetase alpha chain 2 [Heliobacterium modesticaldum Ice1] gi|167591246|gb|ABZ82994.1| succinyl-coa synthetase alpha chain 2 [Heliobacterium modesticaldum Ice1] Length = 289 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 134/298 (44%), Positives = 193/298 (64%), Gaps = 11/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+ + VL+QG+TGK G+FH +Q + T VV G+ P KG + G VP++ Sbjct: 1 MAILVNAASNVLIQGITGKQGSFHFKQMRAF-GTNVVAGVAPGKGGNLFEG----VPLYE 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E +A+V+++P + DA +E+IEA I +IV ITE IPV D + + R + Sbjct: 56 TVQEACEHHRIDATVLFIPAAFCKDAALEAIEAGIKVIVIITEHIPVQDELIIVNRAKLK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + +IGPN G + CK+GI+P F G VG+++RSGTLTYE V + G+GQ++ Sbjct: 116 EAVIIGPNTFG-MASWKCKLGILPNVAFSPGPVGVVARSGTLTYEIVGSLTNVGIGQTSV 174 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGD V G+ F+D+L+ F D T+ +V+VGEIGG+AEEEAA+F+K + KP+V Sbjct: 175 VGLGGDRVPGSSFVDMLKRFEVDPDTKCVVLVGEIGGNAEEEAAEFIKTMS-----KPVV 229 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AGK+APPG+ MGHAGA+I GKG E K+ A+ AG +A P + + LLG Sbjct: 230 AYLAGKSAPPGKRMGHAGAIIERGKGTYEGKVKALTAAGAQVATFPYEVVEKVQTLLG 287 >gi|119872537|ref|YP_930544.1| succinyl-CoA synthetase, alpha subunit [Pyrobaculum islandicum DSM 4184] gi|119673945|gb|ABL88201.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Pyrobaculum islandicum DSM 4184] Length = 293 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 134/299 (44%), Positives = 188/299 (62%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV T+V+VQG TG+ G+FH + + Y T+VV G+ P KG T G VPV+ Sbjct: 1 MTVLVSPKTRVVVQGATGREGSFHLLRMLEYG-TKVVAGVTPGKGGTSVHG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++ ANASV++VP A DA++E+++A I LI ITE IP+ D +RV Sbjct: 56 TVEEAVKKQGANASVVFVPARFAADAVLEAVDAGIELITVITEHIPIHDTLRVVNYARAR 115 Query: 121 SSRLIGPNCPGILTPD-SCKIGIMPGSIFRK-GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPGI+ P K+GIMP SI++ G + I+SRSGTLTYE +Q + G G + Sbjct: 116 GVTVIGPNCPGIVAPPLKTKLGIMPNSIYQTPGRIAIVSRSGTLTYEISYQLIRAGFGIN 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 A+G+GGDP+ G + ++ D E IV++GE+GG AEE A+ + A KP Sbjct: 176 IAIGVGGDPIVGLDLMEATLKVAEDPEVEGIVVIGEVGGDAEERIAKLYAEGA---FNKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 IV +VAG+TAPPG+ MGHAGA++ G G A KI A + GI +A +P + + L +LL Sbjct: 233 IVAYVAGRTAPPGKRMGHAGAIVMMGTGDARSKIEAFRSVGIPVAETPFEVPQLLSKLL 291 >gi|312132694|ref|YP_004000033.1| sucd [Bifidobacterium longum subsp. longum BBMN68] gi|311773652|gb|ADQ03140.1| SucD [Bifidobacterium longum subsp. longum BBMN68] Length = 303 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 131/303 (43%), Positives = 195/303 (64%), Gaps = 15/303 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNVNV 56 + ++ V+VQG+TG G HT + +L T +VGG++P+K T T G + N+ Sbjct: 2 LFIEDGAPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNPRKAGTSVTFPGAKNGADANI 60 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF T EA+E T A ASV++VPP A A++E++EA I LIV ITEGIPV D Sbjct: 61 PVFATCGEAREATGAKASVVFVPPKFAKSAVVEAVEAGIELIVVITEGIPVADSAYFVEL 120 Query: 117 LEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 K R+IGPNCPG++T + +GI+P I +G +G++S+SGTLTY+ + + S Sbjct: 121 ALKKGVRIIGPNCPGLITLGNPGVNLGIIPDGIVGRGPLGLVSKSGTLTYQLMGELSD-- 178 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G + +G GGDP+ GT ++ L+ F AD T++++M+GEIGG AE++AA + AK Sbjct: 179 IGFTACLGAGGDPIVGTTLLEALQAFEADPDTKAVMMIGEIGGFAEQDAAAW----AKEH 234 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK NA++ AGI + +P + + Sbjct: 235 MTKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKNALEAAGIPVGKTPGQAAEIMR 294 Query: 295 ELL 297 ++L Sbjct: 295 DVL 297 >gi|256783948|ref|ZP_05522379.1| succinyl-CoA synthetase subunit alpha [Streptomyces lividans TK24] gi|289767830|ref|ZP_06527208.1| succinyl-coa synthetase subunit alpha [Streptomyces lividans TK24] gi|289698029|gb|EFD65458.1| succinyl-coa synthetase subunit alpha [Streptomyces lividans TK24] Length = 308 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 137/297 (46%), Positives = 188/297 (63%), Gaps = 7/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KVLVQG+TG G HT + +L T VVGG++P+K N VPVF Sbjct: 1 MAIYLTKESKVLVQGMTGAEGMKHTRR-MLAAGTDVVGGVNPRKAGRTVDFDNRTVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V E ERT A+ +V++VPP+ A A++E+ +A I L V ITEGIPV D V + A Sbjct: 60 SVREGIERTGADVTVVFVPPAFAEAAVVEAADAGIGLAVVITEGIPVHDSVALTAHARAK 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G ST Sbjct: 120 GTRVIGPNCPGLITPGQSNAGIIPPDITKPGRIGLVSKSGTLTYQLMYELRD--IGFSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L F D TE IV++GEIGG AEE AA ++ KP+V Sbjct: 178 VGIGGDPVVGTSHIDCLAAFEDDPDTELIVLIGEIGGDAEERAAAHIRAHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP GRTMGHAGA++SG G A K A++ G+ + +P R ++E L Sbjct: 234 AYIAGFTAPEGRTMGHAGAIVSGSSGTARAKKEALESVGVRVGSTPTETARHVLEAL 290 >gi|284029244|ref|YP_003379175.1| succinyl-CoA synthetase subunit alpha [Kribbella flavida DSM 17836] gi|283808537|gb|ADB30376.1| succinyl-CoA synthetase, alpha subunit [Kribbella flavida DSM 17836] Length = 296 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 141/301 (46%), Positives = 196/301 (65%), Gaps = 8/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI + K++KV+VQG+TG GT HT + +L T +VGG++P+K VPVF Sbjct: 1 MSIFLTKDSKVIVQGMTGSEGTKHTTR-MLASGTNIVGGVNPRKAGESVDFDGKPVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 VA+A + T AN SV++VPP DA++E+IEAE+PL+V ITEG+PV D A + S Sbjct: 60 GVADAIKETGANVSVVFVPPKFTKDAVLEAIEAEMPLVVVITEGVPVHDTAAFFAAAQAS 119 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +R+IGPNCPGI+TP GI+P I G +G++S+SGTLTY+ +++ G ST Sbjct: 120 GKTRIIGPNCPGIITPGESNAGIIPADIAGPGRIGLVSKSGTLTYQMMYELRD--FGFST 177 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDP+ GT ID L F D T++IVM+GEIGG AEE AA F+K+ KP+ Sbjct: 178 AIGIGGDPIIGTTHIDALRAFQDDPDTDAIVMIGEIGGDAEERAAAFIKENV----TKPV 233 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG+VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P+ + E++ Sbjct: 234 VGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAVGVKVGKTPSETANLMREIMQE 293 Query: 300 L 300 L Sbjct: 294 L 294 >gi|269796096|ref|YP_003315551.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Sanguibacter keddieii DSM 10542] gi|269098281|gb|ACZ22717.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Sanguibacter keddieii DSM 10542] Length = 296 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 138/301 (45%), Positives = 200/301 (66%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT----GGNVNV 56 M+I + +++KV+VQG+TG G HT + +L T +VGG++P+K T T +V+V Sbjct: 1 MAIFITEDSKVIVQGMTGSEGQKHTTR-MLASGTNIVGGVNPRKAGTSVTFPKGESSVDV 59 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF +VA+A T A+ SVI+VPP+ A++E+IEA IPL+V ITEG+PV D Sbjct: 60 PVFGSVADAMTETGADVSVIFVPPAFTKAAVVEAIEAGIPLVVIITEGVPVKDTAEFFTL 119 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ RLIGPNCPG+++P +GI+P +I G +G++S+SGTLTY+ +++ G Sbjct: 120 AQERGVRLIGPNCPGLISPGLSNVGIIPANITGAGKIGLVSKSGTLTYQMMYELRD--FG 177 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 STA+GIGGDP+ GT ID LE F AD T +IVM+GEIGG AEE AA ++ + Sbjct: 178 FSTAIGIGGDPIIGTTHIDALEAFEADPETAAIVMIGEIGGDAEERAAAYIAEHV----T 233 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + E+ Sbjct: 234 KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSETASLMREI 293 Query: 297 L 297 L Sbjct: 294 L 294 >gi|258404678|ref|YP_003197420.1| succinyl-CoA synthetase, alpha subunit [Desulfohalobium retbaense DSM 5692] gi|257796905|gb|ACV67842.1| succinyl-CoA synthetase, alpha subunit [Desulfohalobium retbaense DSM 5692] Length = 696 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 132/291 (45%), Positives = 184/291 (63%), Gaps = 11/291 (3%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN-VPVFTTVAEAK 66 N VLVQGLTG+ G H Y T +V G+ P KG GG V+ +PV+ +VAEA Sbjct: 415 NAPVLVQGLTGREGRLHARLMREYG-TNIVAGVTPFKG-----GGTVDGLPVYNSVAEAT 468 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + AS+I+VP A +A++E+ +A IP VC+TEGIP ++ +L + +R IG Sbjct: 469 RHHSIAASIIFVPARFATEAMLEARQAGIPWAVCVTEGIPQAQILPALPQLNQGPTRFIG 528 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN PG + P K+GIMP + F G V +LSRSGTLTYE V + +Q GLGQS GIGGD Sbjct: 529 PNTPGFIRPGHMKVGIMPVTAFTPGPVAVLSRSGTLTYECVARLTQAGLGQSFCFGIGGD 588 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P G+ F+D+ L D TE+++++GEIGG AE++ A +++ K G KPIV F+AG+ Sbjct: 589 PFVGSSFVDLCALLENDPQTEAVLILGEIGGQAEQDLAAWVQ---KTGFPKPIVSFIAGQ 645 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 TAPPG+ +GHAGA++ G + AE K+ +M+ AG I P A I +L + L Sbjct: 646 TAPPGKKLGHAGAILEGAQSNAE-KLESMRAAGFGICPDLASIPEALRQAL 695 >gi|325269209|ref|ZP_08135828.1| succinyl-CoA synthetase subunit alpha [Prevotella multiformis DSM 16608] gi|324988438|gb|EGC20402.1| succinyl-CoA synthetase subunit alpha [Prevotella multiformis DSM 16608] Length = 290 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 146/297 (49%), Positives = 198/297 (66%), Gaps = 13/297 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNTK++VQG+TG+ G+FH + Y T VVGG P K +G +PVF Sbjct: 1 MSILINKNTKLIVQGITGRDGSFHASKMKEYG-TNVVGGTSPGKAGQEVSG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T AN S+I+VP A DA++E+I+ I L++CITEG+P LD V + Sbjct: 56 TVKDAVAATGANTSIIFVPAPFAKDAMLEAIDGGIKLVICITEGVPTLDAVAAQRYARIK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG+++PD GIMP +IF+KG G++SRSGTLTYE V+ +Q GLGQSTA Sbjct: 116 GVSVIGPNCPGLISPDESMAGIMPTNIFKKGHTGVISRSGTLTYEVVYNLTQAGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDPV G F ++L +F D T+SI ++GEIGG AEE AA+F+K+ KP+ Sbjct: 176 VGVGGDPVVGLYFEELLRMFQDDPETDSIALIGEIGGDAEERAAKFIKEHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F++G+ APPG+ MGHAGA+IS G G A +KI A + G+ + AR R + ELL Sbjct: 232 VFISGQQAPPGKQMGHAGAIISSGSGSASEKIAAFEAVGVPV----ARETREIPELL 284 >gi|297190796|ref|ZP_06908194.1| succinyl-CoA synthetase subunit alpha [Streptomyces pristinaespiralis ATCC 25486] gi|197722577|gb|EDY66485.1| succinyl-CoA synthetase subunit alpha [Streptomyces pristinaespiralis ATCC 25486] Length = 296 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 134/300 (44%), Positives = 189/300 (63%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++ + K +KVLVQG+TG G HT + +L T VV G++P+K VPVF Sbjct: 1 MAVFLTKESKVLVQGMTGAEGMKHTRR-MLASGTDVVAGVNPRKAGQVVDFDERAVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 V EA T A+ +V++VPP A A++E+ +A I L V ITEGIPV D V +A + Sbjct: 60 GVREAMAATGADVAVVFVPPPFAKAAVMEAADAGIGLAVVITEGIPVHDAVAFQAYAAER 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRK-GSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +R+IGPNCPG+++P GI+P I + G +G++S+SGTLTY+ +++ +G S+ Sbjct: 120 GTRIIGPNCPGLISPGQSNAGIIPADIAAEPGRIGLVSKSGTLTYQLMYELRD--IGFSS 177 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPV GT ID L F D TE IV++GEIGG AEE AA ++ + KP+ Sbjct: 178 AVGIGGDPVVGTTHIDCLAAFEKDPDTELIVLIGEIGGDAEERAAAYITEHV----TKPV 233 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG++AG TAP G+TMGHAGA++SG G AE K A++ AG+ + +P R + E L + Sbjct: 234 VGYIAGFTAPEGKTMGHAGAIVSGSSGTAEAKKQALEAAGVRVGSTPTETSRLVRERLAA 293 >gi|296454190|ref|YP_003661333.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium longum subsp. longum JDM301] gi|296183621|gb|ADH00503.1| succinyl-CoA synthetase, alpha subunit [Bifidobacterium longum subsp. longum JDM301] Length = 303 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 131/303 (43%), Positives = 195/303 (64%), Gaps = 15/303 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNVNV 56 + ++ V+VQG+TG G HT + +L T +VGG++P+K T T G +V++ Sbjct: 2 LFIEDGAPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNPRKAGTSVTFPGAKNGADVDI 60 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF T EA+E T A ASV++VPP A A++E++EA I LIV ITEGIPV D Sbjct: 61 PVFATCGEAREATGAKASVVFVPPKFAKSAVVEAVEAGIELIVVITEGIPVADSAYFVEL 120 Query: 117 LEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 K R+IGPNCPG +T + +GI+P I +G +G++S+SGTLTY+ + + S Sbjct: 121 ALKKGVRIIGPNCPGFITLGNPGVNLGIIPDGIVGRGPLGLVSKSGTLTYQLMGELSD-- 178 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G + +G GGDP+ GT ++ L+ F AD T++++M+GEIGG AE++AA + AK Sbjct: 179 IGFTACLGAGGDPIVGTTLLEALQAFEADPDTKAVMMIGEIGGFAEQDAAAW----AKEH 234 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK NA++ AGI + +P + + Sbjct: 235 MTKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKNALEAAGIPVGKTPGQAAEIMR 294 Query: 295 ELL 297 ++L Sbjct: 295 DIL 297 >gi|332704472|ref|ZP_08424560.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio africanus str. Walvis Bay] gi|332554621|gb|EGJ51665.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio africanus str. Walvis Bay] Length = 721 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 130/298 (43%), Positives = 182/298 (61%), Gaps = 8/298 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 S D T++LVQG+TGK HT + Y +++V G+ P KG G PV+ Sbjct: 413 SFDFDAQTRILVQGITGKVAALHTRLMLGY-GSRIVAGVTPFKGGLEIEGA----PVYDC 467 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA +AS+++VP + A DA++E+ EA IP +VCITEGIP DM+ +L + Sbjct: 468 VREALRHHEIDASIVFVPAAMAADAVLEAAEAGIPWVVCITEGIPQQDMLATLPKLRRLG 527 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPN PGI+ P KIGIMP F G V I SRSGTLTYEA + S G+GQ+ AV Sbjct: 528 TRLIGPNTPGIIVPGRTKIGIMPTDPFTPGPVAIFSRSGTLTYEAAARLSAAGMGQALAV 587 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G F D L + D ++++++GEIGG AEE+ A ++ ++ KP+ Sbjct: 588 GIGGDPLIGLGFADCLAMVNDDARVKAVLVLGEIGGRAEEDLADYV---SRTAFSKPMAA 644 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP GR +GHAGA++ GG K+ A+ AGI + P+ I R ++ LL + Sbjct: 645 FIAGRTAPLGRRLGHAGAILEESSGGVAGKMQALSMAGIHLCPNLESIPRVMMGLLAA 702 >gi|145591734|ref|YP_001153736.1| succinyl-CoA synthetase, alpha subunit [Pyrobaculum arsenaticum DSM 13514] gi|145283502|gb|ABP51084.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Pyrobaculum arsenaticum DSM 13514] Length = 293 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 131/299 (43%), Positives = 189/299 (63%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV NTKV+VQG+TG+ G+FHT++ + Y T+VV G+ P KG T G VPV+ Sbjct: 1 MTVLVGPNTKVVVQGITGREGSFHTQRMLEYG-TKVVAGVTPGKGGTTVHG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA R ANASVI+VP A +A++E+++A + L+V ITE IPV + +R Sbjct: 56 TVEEAVRRHGANASVIFVPARFAANAVLEAVDAGVELVVVITEHIPVHETLRAVNYARSR 115 Query: 121 SSRLIGPNCPGILTPD-SCKIGIMPGSIFRK-GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPG++ P K+GIMP +I++ G + ++SRSGTLTYE +Q + G G + Sbjct: 116 GVTVIGPNCPGLVAPPVRTKLGIMPNNIYQTPGKIAVVSRSGTLTYEISYQLVRAGFGIN 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 A+G+GGDPV G + + D E IV++GE+GG AEE A+ + A KP Sbjct: 176 IAIGVGGDPVVGLDLAEAALRVAQDPDVEGIVVIGEVGGDAEERLAKMYAEGAI---NKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +V +VAG+TAPPG+ MGHAGA++ G G A+ KI A + GI +A +P + + + L Sbjct: 233 MVAYVAGRTAPPGKRMGHAGAIVMLGSGDAKSKIEAFRAVGIPVAETPFEVPQLMARQL 291 >gi|298345239|ref|YP_003717926.1| succinate--CoA ligase [Mobiluncus curtisii ATCC 43063] gi|315655661|ref|ZP_07908559.1| succinyl-CoA synthetase subunit alpha [Mobiluncus curtisii ATCC 51333] gi|298235300|gb|ADI66432.1| succinate--CoA ligase (ADP-forming) [Mobiluncus curtisii ATCC 43063] gi|315489725|gb|EFU79352.1| succinyl-CoA synthetase subunit alpha [Mobiluncus curtisii ATCC 51333] Length = 307 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 148/312 (47%), Positives = 201/312 (64%), Gaps = 24/312 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW----------- 49 MSI +D+N+KV+VQG+TG G HT + + Y T+VV G +PKK T Sbjct: 1 MSIFLDENSKVIVQGMTGSEGRKHTTRMLAYG-TKVVAGTNPKKAGTTVEFDVVPYGPLV 59 Query: 50 ---TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 GG V+VPV+ TVA+AK T AN SVI+VPP+GA AIIE+++A + L+V ITE IP Sbjct: 60 DSVQGGTVSVPVYGTVADAKAATGANTSVIFVPPAGAKGAIIEAVDAGMELVVVITEHIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D A + R+IGPNCPGI++P +GI PG I +G +G++S+SGTLTY+ Sbjct: 120 VQDTNAAFAYAKSHGVRMIGPNCPGIISPGKSNVGITPGDITPRGKLGLVSKSGTLTYQM 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ LG +T +GIGGDP+ GT ID LE F D TE IVM+GEIGG AEE AA + Sbjct: 180 MYELRD--LGFTTCIGIGGDPIIGTTHIDALEAFEQDPETELIVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +K+ KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IKEHV----TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTP 293 Query: 287 ---ARIGRSLVE 295 ARI R +++ Sbjct: 294 SETARIAREIMQ 305 >gi|256831912|ref|YP_003160639.1| succinyl-CoA synthetase, alpha subunit [Jonesia denitrificans DSM 20603] gi|256685443|gb|ACV08336.1| succinyl-CoA synthetase, alpha subunit [Jonesia denitrificans DSM 20603] Length = 297 Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 135/301 (44%), Positives = 198/301 (65%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT----GGNVNV 56 M+I ++ +++V+VQG+TG G HT + +L T +VGG++P+K T G+V + Sbjct: 1 MAIFINNDSRVIVQGMTGAEGHKHTTR-MLASGTTIVGGVNPRKAGTSVEFPSPHGSVEI 59 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF TV EA + T A+ SVI+VPP+ A+ E+I+A +PL V ITEG+PV D R Sbjct: 60 PVFGTVREAMDATGADVSVIFVPPAFTKAAVNEAIDAGMPLTVIITEGVPVADTAEFHTR 119 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + RL+GPNCPGI++P +GI+P +I +G +G++S+SGTLTY+ +++ G Sbjct: 120 AQHAGVRLVGPNCPGIISPGQSNVGIIPANITGRGPIGLVSKSGTLTYQMMYELRD--FG 177 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 STA+GIGGDP+ GT ID L F AD TE+IVM+GEIGG AEE AA ++ + Sbjct: 178 FSTAIGIGGDPIIGTTHIDALAAFEADPDTEAIVMIGEIGGDAEERAAAYISEHV----T 233 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ + ++ Sbjct: 234 KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTASAKKEALEAAGVRVGKTPSETAALMRDI 293 Query: 297 L 297 L Sbjct: 294 L 294 >gi|313679918|ref|YP_004057657.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Oceanithermus profundus DSM 14977] gi|313152633|gb|ADR36484.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Oceanithermus profundus DSM 14977] Length = 289 Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 147/298 (49%), Positives = 200/298 (67%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+T+VLVQG+TG+ G FH EQ Y T++V G+ P KG G VPV+ Sbjct: 1 MSILINKDTRVLVQGITGREGRFHAEQMQKYG-TKIVAGVTPGKGGQEVLG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +AS+++VP + A DA +E+ A +PL+V ITEGIP LDMV +++ Sbjct: 56 TVKEAVAHHGIDASIVFVPAAAAADAALEAAHAGVPLVVLITEGIPTLDMVAAVKEIKEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIG NCPG+++ + K+GIMPG +F+KG VG++SRSGTLTYEA S+ GLG +T Sbjct: 116 GVRLIGGNCPGLISAEESKLGIMPGHVFKKGRVGLISRSGTLTYEAAAALSEAGLGTTTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F D+L LF D TE++V++GEIGGS EEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIIGTTFKDLLPLFNEDPETEAVVVIGEIGGSDEEEAAAWVKEHM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+ G++AP G+ MGHAGA+I G G E K+ A EA I +A + I + + LG Sbjct: 232 GFIGGRSAPKGKRMGHAGAIIMGDVGTPESKLKAFAEADIPVADTIDEIVELVKQRLG 289 >gi|325855034|ref|ZP_08171750.1| succinate-CoA ligase, alpha subunit [Prevotella denticola CRIS 18C-A] gi|327313354|ref|YP_004328791.1| succinate-CoA ligase subunit alpha [Prevotella denticola F0289] gi|325484012|gb|EGC86952.1| succinate-CoA ligase, alpha subunit [Prevotella denticola CRIS 18C-A] gi|326945449|gb|AEA21334.1| succinate-CoA ligase, alpha subunit [Prevotella denticola F0289] Length = 290 Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 144/298 (48%), Positives = 198/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TK++VQG+TG+ G+FH + Y T VVGG P K +G +PVF Sbjct: 1 MSILINKDTKLIVQGITGRDGSFHASKMKEYG-TNVVGGTSPGKAGQEVSG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T AN S+I+VP A DA++E+I+ I L++CITEG+P LD V + Sbjct: 56 TVKDAVAATGANTSIIFVPAPFAKDAMLEAIDGGIELVICITEGVPTLDAVAAQRYARIK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPG+++P+ GIMP +IF+KG G++SRSGTLTYE V+ +Q GLGQSTA Sbjct: 116 GVKVIGPNCPGLISPEESMAGIMPTNIFKKGHTGVISRSGTLTYEVVYNLTQAGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDPV G F D+L +F D T+SI ++GEIGG AEE AA+F+K+ KP+ Sbjct: 176 VGVGGDPVVGLYFEDLLRMFQDDPETDSIALIGEIGGDAEERAARFIKEHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F++G+ APPG+ MGHAGA+IS G G A +KI A + G+ +A + I L LG Sbjct: 232 VFISGQQAPPGKQMGHAGAIISSGSGSASEKIAAFEAVGVPVARETSEIPELLKRQLG 289 >gi|19553761|ref|NP_601763.1| succinyl-CoA synthetase subunit alpha [Corynebacterium glutamicum ATCC 13032] gi|62391403|ref|YP_226805.1| succinyl-CoA synthetase subunit alpha [Corynebacterium glutamicum ATCC 13032] gi|145296560|ref|YP_001139381.1| succinyl-CoA synthetase subunit alpha [Corynebacterium glutamicum R] gi|21325337|dbj|BAB99958.1| Succinyl-CoA synthetase alpha subunit [Corynebacterium glutamicum ATCC 13032] gi|41326744|emb|CAF21226.1| SUCCINYL-COA SYNTHETASE ALPHA SUBUNIT [Corynebacterium glutamicum ATCC 13032] gi|140846480|dbj|BAF55479.1| hypothetical protein [Corynebacterium glutamicum R] Length = 294 Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 138/301 (45%), Positives = 200/301 (66%), Gaps = 8/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++ ++++++QG+TG G+ H + IL ++VGG +P+K + +PVF Sbjct: 1 MSIFLNSDSRIIIQGITGSEGSEHARR-ILASGAKLVGGTNPRKAGQTILINDTELPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E T A+ +VI+VPP+ A AIIE+I+A IPL V ITEGIPV D A +K Sbjct: 60 TVKEAMEETGADVTVIFVPPAFAKAAIIEAIDAHIPLCVIITEGIPVRDASEAWAYAKKV 119 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +R+IGPNCPGI+TP GI P +I G +G++S+SGTLTY+ +++ S +G ST Sbjct: 120 GHTRIIGPNCPGIITPGESLAGITPANIAGSGPIGLISKSGTLTYQMMYELSD--IGIST 177 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDP+ GT ID LE F AD T++IVM+GEIGG AEE AA F+ KP+ Sbjct: 178 AIGIGGDPIIGTTHIDALEAFEADPETKAIVMIGEIGGDAEERAADFISKHV----TKPV 233 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG+VAG TAP G+TMGHAGA+++G +G A K +A++ G+ + +P+ + + E++ + Sbjct: 234 VGYVAGFTAPEGKTMGHAGAIVTGSEGTARAKKHALEAVGVRVGTTPSETAKLMREVVAA 293 Query: 300 L 300 L Sbjct: 294 L 294 >gi|304390799|ref|ZP_07372751.1| succinyl-CoA synthetase subunit alpha [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315656424|ref|ZP_07909313.1| succinyl-CoA synthetase subunit alpha [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|304325682|gb|EFL92928.1| succinyl-CoA synthetase subunit alpha [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492983|gb|EFU82585.1| succinyl-CoA synthetase subunit alpha [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 307 Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 148/312 (47%), Positives = 201/312 (64%), Gaps = 24/312 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW----------- 49 MSI +D+N+KV+VQG+TG G HT + + Y T+VV G +PKK T Sbjct: 1 MSIFLDENSKVIVQGMTGSEGRKHTTRMLAYG-TKVVAGTNPKKAGTTVDFDVVPYGPLA 59 Query: 50 ---TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 GG V+VPV+ TVA+AK T AN SVI+VPP+GA AIIE+++A + L+V ITE IP Sbjct: 60 DSVQGGTVSVPVYGTVADAKAATGANTSVIFVPPAGAKGAIIEAVDAGMELVVVITEHIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D A + R+IGPNCPGI++P +GI PG I +G +G++S+SGTLTY+ Sbjct: 120 VQDTNAAFAYAKSHGVRMIGPNCPGIISPGKSNVGITPGDITPRGKLGLVSKSGTLTYQM 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ LG +T +GIGGDP+ GT ID LE F D TE IVM+GEIGG AEE AA + Sbjct: 180 MYELRD--LGFTTCIGIGGDPIIGTTHIDALEAFEQDPETELIVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +K+ KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IKEHV----TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTP 293 Query: 287 ---ARIGRSLVE 295 ARI R +++ Sbjct: 294 SETARIAREIMQ 305 >gi|119717811|ref|YP_924776.1| succinyl-CoA synthetase subunit alpha [Nocardioides sp. JS614] gi|119538472|gb|ABL83089.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nocardioides sp. JS614] Length = 297 Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 138/304 (45%), Positives = 201/304 (66%), Gaps = 11/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K++K++VQG+TG G+ HT ++ + +VGG++ +K T G ++PV+ Sbjct: 1 MSIYLNKDSKIIVQGMTGGMGSKHT-TLMVEAGSNIVGGVNARKAGTSIELGGKDLPVYG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A+ SV++VPP+ DA IE+I+A I L+V ITEG+PV D V A L+ + Sbjct: 60 TVKEAMAETGADVSVVFVPPAFTKDACIEAIDAGIALLVVITEGVPVQDTAEVFAYLQSA 119 Query: 121 S----SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + +R+IGPNCPG++TP GI P +I G VG++S+SGTLTY+ +++ G Sbjct: 120 ANTGGTRMIGPNCPGVITPGEALAGITPATIAGSGPVGLVSKSGTLTYQMMYELRDHGF- 178 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 STA+GIGGDP+ GT ID L F AD T++IVM+GEIGG AEE AA ++K+ Sbjct: 179 -STAIGIGGDPIIGTTHIDALAAFEADPDTKAIVMIGEIGGDAEERAAAYIKEHV----T 233 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ G+ + +P+ + E+ Sbjct: 234 KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAVGVKVGKTPSETAELMREV 293 Query: 297 LGSL 300 L SL Sbjct: 294 LASL 297 >gi|21224886|ref|NP_630665.1| succinyl-CoA synthetase subunit alpha [Streptomyces coelicolor A3(2)] gi|3288607|emb|CAA19779.1| succinyl-coa synthetase alpha chain [Streptomyces coelicolor A3(2)] Length = 308 Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 135/297 (45%), Positives = 188/297 (63%), Gaps = 7/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KVLVQG+TG G HT + +L T VVGG++P+K N VPVF Sbjct: 1 MAIYLTKESKVLVQGMTGAEGMKHTRR-MLAAGTDVVGGVNPRKAGRTVDFDNRTVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V E ERT A+ +V++VPP+ A A++E+ +A + L V ITEGIPV D V + A Sbjct: 60 SVREGIERTGADVTVVFVPPAFAEAAVVEAADAGVGLAVVITEGIPVHDSVALTAHARAK 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G ST Sbjct: 120 GTRVIGPNCPGLITPGQSNAGIIPPDITKPGRIGLVSKSGTLTYQLMYELRD--IGFSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L F D TE IV++GEIGG AEE AA ++ KP+V Sbjct: 178 VGIGGDPVVGTSHIDCLAAFEDDPDTELIVLIGEIGGDAEERAAAHIRAHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP GRTMGHAGA++SG G A K A++ G+ + +P R +++ L Sbjct: 234 AYIAGFTAPEGRTMGHAGAIVSGSSGTARAKKEALESVGVRVGSTPTETARHVLQAL 290 >gi|317153396|ref|YP_004121444.1| ATP-grasp domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316943647|gb|ADU62698.1| ATP-grasp domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 692 Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 127/284 (44%), Positives = 178/284 (62%), Gaps = 9/284 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 S+ +D++T +LVQG+TG+ G HT Y VV G+ P KG G VPV+ + Sbjct: 405 SLGIDRDTPILVQGITGREGQLHTRLMQAY-GANVVAGVTPFKGGQEILG----VPVYNS 459 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 VA+A AS+I+VPP A DA++E+ EIP +CITEGI +M+ V +++ S Sbjct: 460 VAQAMRHHKIGASIIFVPPRMAADAVLEAACNEIPWTICITEGIAQHEMLAVFEQIKSSP 519 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 ++++GPN PG++ P KIGIMP F G V ILSRSGTLTYE + + +GQS V Sbjct: 520 TQVVGPNTPGVIVPGQTKIGIMPTDPFMPGPVAILSRSGTLTYEVSARLTASNIGQSVCV 579 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP G ++ DV E+ EAT ++V++GEIGG AEE A+++ + G KP+V Sbjct: 580 GIGGDPFIGVKYADVFEMLRNHEATRAVVVLGEIGGQAEENLAEYV---VRTGFDKPVVS 636 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 F+AG+TAPPG+ +GHAGA++ G GG KI M+ AG + S Sbjct: 637 FIAGRTAPPGKRLGHAGAILEKG-GGVGRKIETMRRAGFTVCSS 679 >gi|289568925|ref|ZP_06449152.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis T17] gi|289542679|gb|EFD46327.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis T17] Length = 310 Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 135/262 (51%), Positives = 177/262 (67%), Gaps = 14/262 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKTNV-- 238 Query: 234 GRKKPIVGFVAGKTAPPGRTMG 255 KP+VG+VAG TAP G+TMG Sbjct: 239 --SKPVVGYVAGFTAPEGKTMG 258 >gi|23335119|ref|ZP_00120357.1| COG0074: Succinyl-CoA synthetase, alpha subunit [Bifidobacterium longum DJO10A] gi|23465311|ref|NP_695914.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium longum NCC2705] gi|189439320|ref|YP_001954401.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium longum DJO10A] gi|227547253|ref|ZP_03977302.1| succinate--CoA ligase (ADP-forming) [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239621479|ref|ZP_04664510.1| succinyl-CoA ligase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|317483243|ref|ZP_07942238.1| succinate-CoA ligase [Bifidobacterium sp. 12_1_47BFAA] gi|322689203|ref|YP_004208937.1| succinyl-CoA synthase subunit alpha [Bifidobacterium longum subsp. infantis 157F] gi|322691269|ref|YP_004220839.1| succinyl-CoA synthase alpha subunit [Bifidobacterium longum subsp. longum JCM 1217] gi|23325950|gb|AAN24550.1| succinyl-CoA synthetase alpha chain [Bifidobacterium longum NCC2705] gi|189427755|gb|ACD97903.1| Succinyl-CoA synthetase alpha subunit [Bifidobacterium longum DJO10A] gi|227212212|gb|EEI80108.1| succinate--CoA ligase (ADP-forming) [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239515940|gb|EEQ55807.1| succinyl-CoA ligase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291516879|emb|CBK70495.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Bifidobacterium longum subsp. longum F8] gi|316915312|gb|EFV36739.1| succinate-CoA ligase [Bifidobacterium sp. 12_1_47BFAA] gi|320456125|dbj|BAJ66747.1| succinyl-CoA synthase alpha subunit [Bifidobacterium longum subsp. longum JCM 1217] gi|320460539|dbj|BAJ71159.1| succinyl-CoA synthase alpha subunit [Bifidobacterium longum subsp. infantis 157F] Length = 303 Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 130/303 (42%), Positives = 195/303 (64%), Gaps = 15/303 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNVNV 56 + ++ V+VQG+TG G HT + +L T +VGG++P+K T T G + ++ Sbjct: 2 LFIEDGAPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNPRKAGTSVTFPGAKNGADADI 60 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF T EA+E T A ASV++VPP A A++E++EA I LIV ITEGIPV D Sbjct: 61 PVFATCGEAREATGAKASVVFVPPKFAKSAVVEAVEAGIELIVVITEGIPVADSAYFVEL 120 Query: 117 LEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 K R+IGPNCPG++T + +GI+P I +G +G++S+SGTLTY+ + + S Sbjct: 121 ALKKGVRIIGPNCPGLITLGNPGVNLGIIPDGIVGRGPLGLVSKSGTLTYQLMGELSD-- 178 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G + +G GGDP+ GT ++ L+ F AD T++++M+GEIGG AE++AA + AK Sbjct: 179 IGFTACLGAGGDPIVGTTLLEALQAFEADPDTKAVMMIGEIGGFAEQDAAAW----AKEH 234 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK NA++ AGI + +P + + Sbjct: 235 MTKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKNALEAAGIPVGKTPGQAAEIMR 294 Query: 295 ELL 297 ++L Sbjct: 295 DVL 297 >gi|215445098|ref|ZP_03431850.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis T85] Length = 288 Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 135/262 (51%), Positives = 177/262 (67%), Gaps = 14/262 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMG 255 KP+VG+VAG TAP G+TMG Sbjct: 236 --SKPVVGYVAGFTAPEGKTMG 255 >gi|227498129|ref|ZP_03928302.1| succinate--CoA ligase (ADP-forming) [Actinomyces urogenitalis DSM 15434] gi|226832465|gb|EEH64848.1| succinate--CoA ligase (ADP-forming) [Actinomyces urogenitalis DSM 15434] Length = 307 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 140/314 (44%), Positives = 193/314 (61%), Gaps = 24/314 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT---------- 50 MSI +D++ +V+VQG+TG G HT + +L TQVV G++P+K T Sbjct: 1 MSIFLDESDRVIVQGMTGSEGRKHTRR-MLCAGTQVVAGVNPRKAGTTVVFDVEPIGPGA 59 Query: 51 ----GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G V VPV+ TVAEA+E T A SV++VPP+ A A+IE+++A + L+V ITEGIP Sbjct: 60 GTGEAGEVEVPVYGTVAEAREATGATVSVVFVPPAFAKGAVIEAVDAGMRLVVVITEGIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D ++ ++IGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VADATYFRSYAASKGVQIIGPNCPGIISPARSNVGITPPDITGPGPIGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + LG +T +GIGGDPV GT ID L F AD T+ +VM+GEIGG AEE AA + Sbjct: 180 MHELRD--LGFTTCIGIGGDPVVGTTHIDALAGFEADPDTKLVVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +KD KP+V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IKDN----MTKPVVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGRTP 293 Query: 287 ---ARIGRSLVELL 297 A I R L L Sbjct: 294 TETADIARELYRAL 307 >gi|219556818|ref|ZP_03535894.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis T17] Length = 307 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 135/262 (51%), Positives = 177/262 (67%), Gaps = 14/262 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKTNV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMG 255 KP+VG+VAG TAP G+TMG Sbjct: 236 --SKPVVGYVAGFTAPEGKTMG 255 >gi|323697830|ref|ZP_08109742.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio sp. ND132] gi|323457762|gb|EGB13627.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio desulfuricans ND132] Length = 692 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 124/281 (44%), Positives = 177/281 (62%), Gaps = 9/281 (3%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 +D +T +LVQG+TG+ G HT Y VV G+ P KG G VPV+ ++A+ Sbjct: 408 IDADTPILVQGITGREGQLHTRLMQEYG-ANVVAGVTPFKGGQEVLG----VPVYDSIAQ 462 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 A AS+I+VPP A DA+ E++ EIP VCITEGI DM+ + + S +R+ Sbjct: 463 AARAHDIGASIIFVPPRMAADAVAEAVRNEIPWTVCITEGITQHDMLAAFEQAKGSPTRI 522 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPN PG++ P KIGIMP F G V +LSRSGTLTYE + ++ G+GQS VGIG Sbjct: 523 VGPNTPGVIVPGRTKIGIMPTMPFMPGPVAVLSRSGTLTYEVADRLTRAGIGQSLCVGIG 582 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 GDP G +F+D+ E+ + T ++V++GEIGG AEE A+++ + G KP++ F+A Sbjct: 583 GDPFIGVDFVDMFEMIRNHDETRAVVVLGEIGGQAEENLAEYV---VRTGFDKPVISFIA 639 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 G+TAP G+ +GHAGA+++ G GG +DK+ M AG + PS Sbjct: 640 GQTAPAGKRLGHAGAILANG-GGIKDKLETMGRAGFAVCPS 679 >gi|289757037|ref|ZP_06516415.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis T85] gi|289712601|gb|EFD76613.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis T85] Length = 291 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 135/262 (51%), Positives = 177/262 (67%), Gaps = 14/262 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNV-- 238 Query: 234 GRKKPIVGFVAGKTAPPGRTMG 255 KP+VG+VAG TAP G+TMG Sbjct: 239 --SKPVVGYVAGFTAPEGKTMG 258 >gi|212715823|ref|ZP_03323951.1| hypothetical protein BIFCAT_00724 [Bifidobacterium catenulatum DSM 16992] gi|212661190|gb|EEB21765.1| hypothetical protein BIFCAT_00724 [Bifidobacterium catenulatum DSM 16992] Length = 307 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 132/311 (42%), Positives = 195/311 (62%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGST------YWTGGNV 54 M++ ++ V+VQG+TG G HT + +L T +VGG++ +K G ++ Sbjct: 1 MTLFIEDGAPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNARKAGQEVNFPEAKNGEDI 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + VF + +EA E T A ASV++VPP A DA++E+IEA I LIV ITEGIPV D Sbjct: 60 TLRVFGSCSEAVETTGAQASVVFVPPRFAKDAVVEAIEAGIKLIVVITEGIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGILTPDS------CKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R++GPNCPG+LT S C +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALRKGVRIVGPNCPGLLTLSSMEGAQGCNLGIIPDGIVSRGPLGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G GGDP+ GT + LE F D+AT+++VM+GEIGGSAE++AA++ Sbjct: 180 ELSD--IGFTACLGAGGDPIVGTTLQEALEAFENDDATKAVVMIGEIGGSAEQDAAKW-- 235 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 A KP+V ++AG TAP GR MGHAGA++SGGKG A+DK A++ GI + +P + Sbjct: 236 --ASEHMTKPVVAYIAGFTAPEGRQMGHAGAIVSGGKGTAQDKKEALEAVGIRVGRTPGQ 293 Query: 289 IGRSLVELLGS 299 + E+L S Sbjct: 294 TAEIMREVLAS 304 >gi|119025827|ref|YP_909672.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium adolescentis ATCC 15703] gi|118765411|dbj|BAF39590.1| succinyl-CoA ligase [Bifidobacterium adolescentis ATCC 15703] Length = 307 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 134/311 (43%), Positives = 195/311 (62%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNV 54 M++ ++ V+VQG+TG G HT + +L T +VGG++ +K T G + Sbjct: 1 MTLFIEDGAPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNARKAGLDVTFPEAKNGEDA 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + VF +EA E T A ASV++VPP A DA++E+IEA I LIV ITEGIPV D Sbjct: 60 TIHVFANCSEAIEATGAKASVVFVPPRFAKDAVVEAIEAGIELIVVITEGIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGILT-PDS-----CKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R++GPNCPG+LT P S C +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALRKGVRIVGPNCPGLLTLPSSKDAKGCNLGIIPDGIVSRGPLGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G GGDP+ GT + LE F DEAT+++VM+GEIGGSAE++AA++ Sbjct: 180 ELSD--IGFTACLGAGGDPIVGTTLQEALEAFENDEATKAVVMIGEIGGSAEQDAAKW-- 235 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 A KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK A++ GI + +P + Sbjct: 236 --ASEHMTKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKEALEAVGIRVGRTPGQ 293 Query: 289 IGRSLVELLGS 299 + E+L S Sbjct: 294 TAEIMREVLAS 304 >gi|327332325|gb|EGE74061.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL097PA1] Length = 297 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 143/302 (47%), Positives = 199/302 (65%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVF 59 M+I++D+N+K++VQG+TG G HT Q +L T VVGG++P+K G+T G VPV+ Sbjct: 1 MAIILDQNSKIIVQGMTGSEGMKHT-QRMLDSGTAVVGGVNPRKAGTTVDFNGGTTVPVY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA E T AN SVI+VP A++E+IEAE+PL+VCITEG+PV D ++ Sbjct: 60 GSVKEAVEATGANVSVIFVPAKFTKSAVMEAIEAEMPLVVCITEGVPVKDTAEFFTAAQR 119 Query: 120 S-SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S +R+IGPNCPGI++P GI+P I G VG++S+SGTLTY+ +++ LG S Sbjct: 120 SGKTRIIGPNCPGIISPGKSNAGIVPADITGPGRVGLVSKSGTLTYQLMYEVRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA+++ + KP Sbjct: 178 TAIGIGGDPIIGTTHIDALQAFQDDPETDIIVMIGEIGGDAEERAAKYISEHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P R E + Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTPTETARLAHEAME 293 Query: 299 SL 300 SL Sbjct: 294 SL 295 >gi|289807796|ref|ZP_06538425.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 196 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 123/198 (62%), Positives = 149/198 (75%), Gaps = 5/198 (2%) Query: 21 GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPP 80 GTFH+EQAI Y TQ+VGG+ P KG T G +PVF TV EA E T A ASVIYVP Sbjct: 1 GTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFNTVREAVEATGATASVIYVPA 55 Query: 81 SGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKI 140 D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ R+IGPNCPG++TP CKI Sbjct: 56 PFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKI 115 Query: 141 GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 GIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST VGIGGDP+ G+ FID+L+LF Sbjct: 116 GIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILKLF 175 Query: 201 LADEATESIVMVGEIGGS 218 D TE+IVM+GEIGGS Sbjct: 176 QEDPQTEAIVMIGEIGGS 193 >gi|257077171|ref|ZP_05571532.1| succinyl-CoA synthetase subunit alpha [Ferroplasma acidarmanus fer1] Length = 287 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 130/287 (45%), Positives = 180/287 (62%), Gaps = 10/287 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 +++ K TKV+VQG+TG G FH+ + I + T VV G+ P K T G V V+ V Sbjct: 5 VIISKETKVIVQGMTGHQGAFHSGEMIKFG-TNVVAGVSPGKAGTKVNG----VDVYNNV 59 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 A+ + +AS+I VP DA +E+IE I LI +TE +PV D + + + Sbjct: 60 ADTLD-LKPDASMISVPAPFVKDAALEAIENGIKLIYILTEHVPVHDTMELYHEARRKGV 118 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PGI KIGIMP +IFR G+V + SRSGTLTYE V + G G+ST +G Sbjct: 119 FMIGPNSPGITVAGQAKIGIMPNNIFRVGNVAVASRSGTLTYEIVKAVTDAGFGESTVIG 178 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GGDP+ GT F D++++F D T+ IV+VGEIGGS EE+AA+++ K+ KKP+ G+ Sbjct: 179 LGGDPIIGTTFSDIIKIFNEDPQTKQIVLVGEIGGSEEEKAAEYI----KKYVKKPVTGY 234 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + G +APPG+ MGHAGA+I G G A+ KI A K+AGI +A P I Sbjct: 235 ITGISAPPGKKMGHAGAIIEKGTGTADSKIKAFKDAGIKVANYPDDI 281 >gi|302889181|ref|XP_003043476.1| hypothetical protein NECHADRAFT_54871 [Nectria haematococca mpVI 77-13-4] gi|256724393|gb|EEU37763.1| hypothetical protein NECHADRAFT_54871 [Nectria haematococca mpVI 77-13-4] Length = 307 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 133/268 (49%), Positives = 178/268 (66%), Gaps = 5/268 (1%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 T VVGG+ P KG ++++PVF+TV EA + S ++VP A AIIESIEA Sbjct: 20 TNVVGGVSPGKGGQ----THLDLPVFSTVQEAMAEVKPHVSAVFVPAQFAAKAIIESIEA 75 Query: 94 EIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 E+PL+V + E +PV DM+RV L +S +RL+GPNCPGI+ P+ C++GIMP + +G Sbjct: 76 EVPLVVSVAEHVPVHDMLRVHEILRTQSKTRLVGPNCPGIIAPEQCRVGIMPYKQYTRGC 135 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 VGI+S+SGTL+YEAV TS+ GLGQS VG+GGD + GT D L LF E T+ I+++ Sbjct: 136 VGIVSKSGTLSYEAVGSTSRAGLGQSIVVGMGGDMLPGTTLADGLRLFFEHEETKGIIVI 195 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 GEIGG AE EAA +K+ K KP+V VAG+TAP G+TMGHAGAV S G A K Sbjct: 196 GEIGGEAELEAADLIKEYRKTANPKPVVAMVAGRTAPEGKTMGHAGAVFSAGDITAGAKA 255 Query: 273 NAMKEAGICIAPSPARIGRSLVELLGSL 300 A+++AG + P +G ++ ELLG L Sbjct: 256 KALEDAGAIVVAHPGVMGETMRELLGIL 283 >gi|258651503|ref|YP_003200659.1| succinyl-CoA synthetase subunit alpha [Nakamurella multipartita DSM 44233] gi|258554728|gb|ACV77670.1| succinyl-CoA synthetase, alpha subunit [Nakamurella multipartita DSM 44233] Length = 293 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 140/300 (46%), Positives = 197/300 (65%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + ++++V+VQG+TG GT HT + +L T +VGG++ +K T PVF Sbjct: 1 MAIFLTESSRVIVQGMTGSEGTKHTRR-MLASGTNIVGGVNARKAGTTVDFDGSAQPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA ++T A+ SV++VPP+ DAIIE+I+A+I L V ITEG+PV D A K+ Sbjct: 60 SVAEAMDKTGADVSVLFVPPAFTKDAIIEAIDAQIGLAVVITEGVPVHDTAYAWAYAVKT 119 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 ++R+IGPNCPGI++P GI+P I G VG++S+SGTLTY+ +++ LG S Sbjct: 120 GNATRIIGPNCPGIISPGKSNAGIIPADITGPGRVGLVSKSGTLTYQMMYELRD--LGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L F D TE+IVM+GEIGG AEE AA F+ D KP Sbjct: 178 TAIGIGGDPIIGTTHIDALAAFEQDPETEAIVMIGEIGGDAEERAAAFIADNV----SKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ G+ + +P+ R L +G Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKQEALEAVGVKVGKTPSETARLLRAAIG 293 >gi|325962278|ref|YP_004240184.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Arthrobacter phenanthrenivorans Sphe3] gi|323468365|gb|ADX72050.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Arthrobacter phenanthrenivorans Sphe3] Length = 300 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 141/307 (45%), Positives = 199/307 (64%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K++KV+VQG+TG GT HT +L T +VGG++ +K T G+ + VF Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHT-ALMLKAGTNIVGGVNARKAGTTVLHGDKEITVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 TV EA T A+ S+++VPP+ A++E+IEA I L+V ITEG+PV D A + Sbjct: 60 TVKEAMAETGADVSIVFVPPAFTKAAVVEAIEAGIGLVVVITEGVPVQDSAEFWALAQSK 119 Query: 119 -----KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 VDADGNQVTRIIGPNCPGIITPGESLVGITPANITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDP+ GT ID L F AD T++IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPIIGTTHIDALAAFEADPETKAIVMIGEIGGDAEERAADFIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + L Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAKLL 293 Query: 294 VELLGSL 300 E+ +L Sbjct: 294 REVYAAL 300 >gi|256380493|ref|YP_003104153.1| succinyl-CoA synthetase subunit alpha [Actinosynnema mirum DSM 43827] gi|255924796|gb|ACU40307.1| succinyl-CoA synthetase, alpha subunit [Actinosynnema mirum DSM 43827] Length = 296 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 138/302 (45%), Positives = 201/302 (66%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG GT HT++ +L T +VGG++P+K +PVF Sbjct: 1 MAIFITKDSKVIVQGMTGAEGTKHTKR-MLASGTTIVGGVNPRKAGEKVDFDGTVLPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD--MVRVKARLE 118 +VA+A E T A+ +VI+VPP+ A A+IE+I+A I L V ITEGIPV D + A Sbjct: 60 SVADAMEATGADVTVIFVPPAFAKAAVIEAIDAGIGLAVVITEGIPVHDTAVFWAHAVAT 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG+++P GI+P +I G +G++S+SGTLTY+ +++ G S Sbjct: 120 GNKTRIIGPNCPGLISPGQSNAGIIPANISGAGKIGLVSKSGTLTYQMMYELRD--FGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID LE F AD T +IVM+GEIGG AEE AA ++KD KP Sbjct: 178 TAIGIGGDPIIGTTHIDALEAFEADPETAAIVMIGEIGGDAEERAAAYIKDNV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + E++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAALMREIMS 293 Query: 299 SL 300 ++ Sbjct: 294 TI 295 >gi|30249769|ref|NP_841839.1| succinyl-CoA synthetase subunit alpha [Nitrosomonas europaea ATCC 19718] gi|30180806|emb|CAD85722.1| ATP-citrate lyase/succinyl-CoA ligases:DUF184 [Nitrosomonas europaea ATCC 19718] Length = 295 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 137/304 (45%), Positives = 194/304 (63%), Gaps = 13/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+++ T+++VQG TG+ GTFH ++ I Y + VVGG+ P KG G +PVF Sbjct: 1 MAILINEQTRIIVQGFTGRIGTFHAQEMIDY-GSNVVGGVTPGKGGQKHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 TV EA E+ A AS+++VPP+ A D+I+E+ +A I V IT+GIP DM+ VK L Sbjct: 56 TVREAVEQAGAEASIVFVPPAFAADSIMEAADAGIKYCVSITDGIPTQDMMTVKNFLRLF 115 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 E+ L GPNC G ++P +GIMPG I+ +G VG++ RSGTL YEA Q + +G Sbjct: 116 PEEDRMMLTGPNCSGTISPGRAMLGIMPGHIYSRGVVGVVGRSGTLGYEAADQMRRLNIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ +VL+ D T+ +M+GEIGG E EA F AK Sbjct: 176 ISTSVGIGGDPIIGSSHRNVLQKLEEDPETKVTLMIGEIGGPMEVEAGLF----AKENMS 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V ++AG TAPPGR MGHAGA+IS A +K+ +KE G+ I P+P+ +G ++ ++ Sbjct: 232 KPLVAYIAGLTAPPGRRMGHAGAIISSAGESAAEKVERLKELGVTICPTPSLMGETVAKV 291 Query: 297 LGSL 300 L L Sbjct: 292 LAGL 295 >gi|320095658|ref|ZP_08027314.1| succinate--CoA ligase (ADP-forming) [Actinomyces sp. oral taxon 178 str. F0338] gi|319977379|gb|EFW09066.1| succinate--CoA ligase (ADP-forming) [Actinomyces sp. oral taxon 178 str. F0338] Length = 305 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 139/311 (44%), Positives = 193/311 (62%), Gaps = 21/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGST--------YWTG- 51 M+I ++ +++VLVQG+TG G HT + +L T VVGG +P+K T Y Sbjct: 1 MTIFINSDSRVLVQGMTGSEGRKHTAR-MLSAGTAVVGGTNPRKAGTAVAFDVVGYGPAA 59 Query: 52 -----GNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G VPVF TVAEA+ T AN SV++VPP+ A DA +E+I+A I +V ITEGIP Sbjct: 60 DRVRPGVAEVPVFGTVAEARAATGANVSVVFVPPAFAKDAALEAIDAGIETVVVITEGIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D V R + +RLIGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VQDSVVFVDRALEKGTRLIGPNCPGIISPAQSNVGITPADITGPGRIGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + +G +T +GIGGDPV GT ID L+ F AD T+ +VM+GEIGG AEE AA + Sbjct: 180 MHELRD--IGFTTCLGIGGDPVVGTTHIDALKAFEADPDTDLVVMIGEIGGDAEERAAAW 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 + + KP+V ++AG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 ISEN----MTKPVVAYIAGFTAPEGKTMGHAGAIVSGSSGTAAAKAEALEAVGVRVGRTP 293 Query: 287 ARIGRSLVELL 297 ++ ELL Sbjct: 294 SQTALIARELL 304 >gi|220911708|ref|YP_002487017.1| succinyl-CoA synthetase subunit alpha [Arthrobacter chlorophenolicus A6] gi|219858586|gb|ACL38928.1| succinyl-CoA synthetase, alpha subunit [Arthrobacter chlorophenolicus A6] Length = 300 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 141/307 (45%), Positives = 199/307 (64%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K++KV+VQG+TG GT HT +L T +VGG++ +K T G + VF Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHT-ALMLKAGTNIVGGVNARKAGTTVLHGEKEITVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A+ S+++VPP+ A++E+IEA I L+V ITEG+PV D A + + Sbjct: 60 TVKEAIAETGADVSIVFVPPAFTKAAVVEAIEAGIGLVVVITEGVPVQDSAEFWALAQAT 119 Query: 121 S-------SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 VDADGNQVTRIIGPNCPGIITPGEALVGITPANITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDP+ GT ID L F AD T++IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPIIGTTHIDALAAFEADPETKAIVMIGEIGGDAEERAADFIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + L Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAKLL 293 Query: 294 VELLGSL 300 E+ +L Sbjct: 294 REVFAAL 300 >gi|118462581|ref|YP_880329.1| succinyl-CoA synthetase subunit alpha [Mycobacterium avium 104] gi|118163868|gb|ABK64765.1| succinyl-CoA synthetase alpha chain [Mycobacterium avium 104] Length = 300 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 151/307 (49%), Positives = 204/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQVVGG++ +K T + G +V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHT-ALMLKAGTQVVGGVNARKAGTTVSHVDPVGKDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV+EA + T AN SV++VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGTVSEAMKETGANVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 ++K +R+IGPNCPGI+TP GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 YNVDKGQKTRIIGPNCPGIITPGEALAGITPANISGPGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G ST++GIGGDP+ GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTSIGIGGDPIIGTTHIDAIEAFEKDPDTKIIVMIGEIGGDAEERAADYIKAHV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILQSL 300 >gi|50843214|ref|YP_056441.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes KPA171202] gi|289424948|ref|ZP_06426727.1| succinyl-CoA synthetase, alpha subunit [Propionibacterium acnes SK187] gi|295131279|ref|YP_003581942.1| succinate-CoA ligase [ADP-forming], alpha subunit [Propionibacterium acnes SK137] gi|50840816|gb|AAT83483.1| succinyl-CoA synthetase alpha subunit [Propionibacterium acnes KPA171202] gi|289154647|gb|EFD03333.1| succinyl-CoA synthetase, alpha subunit [Propionibacterium acnes SK187] gi|291376629|gb|ADE00484.1| succinate-CoA ligase [ADP-forming], alpha subunit [Propionibacterium acnes SK137] gi|313763124|gb|EFS34488.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL013PA1] gi|313773161|gb|EFS39127.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL074PA1] gi|313810357|gb|EFS48071.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL083PA1] gi|313812187|gb|EFS49901.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL025PA1] gi|313816464|gb|EFS54178.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL059PA1] gi|313828276|gb|EFS65990.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL063PA2] gi|313830204|gb|EFS67918.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL007PA1] gi|313832957|gb|EFS70671.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL056PA1] gi|314914446|gb|EFS78277.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL005PA4] gi|314917770|gb|EFS81601.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL050PA1] gi|314919504|gb|EFS83335.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL050PA3] gi|314930096|gb|EFS93927.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL067PA1] gi|314957103|gb|EFT01208.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL027PA1] gi|314957693|gb|EFT01796.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL002PA1] gi|314969861|gb|EFT13959.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL037PA1] gi|314972988|gb|EFT17084.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL053PA1] gi|314975498|gb|EFT19593.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL045PA1] gi|314984815|gb|EFT28907.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL005PA1] gi|315079958|gb|EFT51934.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL078PA1] gi|315096645|gb|EFT68621.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL038PA1] gi|315097874|gb|EFT69850.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL059PA2] gi|315100638|gb|EFT72614.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL046PA1] gi|315106178|gb|EFT78154.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL030PA1] gi|315109265|gb|EFT81241.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL030PA2] gi|327325311|gb|EGE67116.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL096PA2] gi|327443826|gb|EGE90480.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL043PA1] gi|327449138|gb|EGE95792.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL043PA2] gi|327451320|gb|EGE97974.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL087PA3] gi|327451774|gb|EGE98428.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL083PA2] gi|328752259|gb|EGF65875.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL087PA1] gi|328755356|gb|EGF68972.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL025PA2] gi|328761101|gb|EGF74650.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL099PA1] Length = 297 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 142/302 (47%), Positives = 199/302 (65%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVF 59 M+I++D+N+K++VQG+TG G HT Q +L T VVGG++P+K G+T G VPV+ Sbjct: 1 MAIILDQNSKIIVQGMTGSEGMKHT-QRMLDSGTAVVGGVNPRKAGTTVDFNGGTTVPVY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V +A E T AN SVI+VP A++E+IEAE+PL+VCITEG+PV D ++ Sbjct: 60 GSVKQAVEATGANVSVIFVPAKFTKSAVMEAIEAEMPLVVCITEGVPVKDTAEFFTAAQR 119 Query: 120 S-SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S +R+IGPNCPGI++P GI+P I G VG++S+SGTLTY+ +++ LG S Sbjct: 120 SGKTRIIGPNCPGIISPGKSNAGIVPADITGPGRVGLVSKSGTLTYQLMYEVRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA+++ + KP Sbjct: 178 TAIGIGGDPIIGTTHIDALQAFQDDPETDIIVMIGEIGGDAEERAAKYISEHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P R E + Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTPTETARLAHEAME 293 Query: 299 SL 300 SL Sbjct: 294 SL 295 >gi|288803534|ref|ZP_06408965.1| succinate-CoA ligase, alpha subunit [Prevotella melaninogenica D18] gi|288333957|gb|EFC72401.1| succinate-CoA ligase, alpha subunit [Prevotella melaninogenica D18] Length = 290 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 142/297 (47%), Positives = 199/297 (67%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TK++VQG+TG+ G+FH + Y T VVGG P K G +PVF Sbjct: 1 MSILINKDTKLIVQGITGRDGSFHASKMKEYG-TNVVGGTSPGKAGQEVCG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T ANAS+I+VP A DA++E+I+ + L++CITEG+P LD V + + Sbjct: 56 TVKDAVAATGANASIIFVPAPFAKDAMLEAIDGGVKLVICITEGVPTLDAVAAQRYAKIK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPG+++P+ GIMP +IF+KG G++SRSGTLTYE V+ +Q GLGQSTA Sbjct: 116 GVKVIGPNCPGLISPEESMAGIMPTNIFKKGHTGVISRSGTLTYEVVYNLTQAGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDPV G F ++L +F D T+SI ++GEIGG AEE AA+F+K+ KP+ Sbjct: 176 VGVGGDPVVGLYFEELLRMFQDDPETDSIALIGEIGGDAEERAAKFIKEHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F++G+ APPG+ MGHAGA+IS G G A +KI A + G+ +A + I L + L Sbjct: 232 VFISGQQAPPGKQMGHAGAIISSGSGSASEKIAAFEAVGVPVARETSEIPELLKKQL 288 >gi|313793370|gb|EFS41428.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL110PA1] gi|313800986|gb|EFS42254.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL110PA2] gi|313838060|gb|EFS75774.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL086PA1] gi|314963430|gb|EFT07530.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL082PA1] gi|315077279|gb|EFT49341.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL053PA2] gi|327451703|gb|EGE98357.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL092PA1] Length = 298 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 142/302 (47%), Positives = 199/302 (65%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVF 59 M+I++D+N+K++VQG+TG G HT Q +L T VVGG++P+K G+T G VPV+ Sbjct: 1 MAIILDQNSKIIVQGMTGSEGMKHT-QRMLDSGTAVVGGVNPRKAGTTVDFNGGTTVPVY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V +A E T AN SVI+VP A++E+IEAE+PL+VCITEG+PV D ++ Sbjct: 60 GSVKQAVEATGANVSVIFVPAKFTKSAVMEAIEAEMPLVVCITEGVPVKDTAEFFTAAQR 119 Query: 120 S-SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S +R+IGPNCPGI++P GI+P I G VG++S+SGTLTY+ +++ LG S Sbjct: 120 SGKTRIIGPNCPGIISPGKSNAGIVPADITGPGRVGLVSKSGTLTYQLMYEVRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA+++ + KP Sbjct: 178 TAIGIGGDPIIGTTHIDALQAFQDDPETDIIVMIGEIGGDAEERAAKYISEHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P R E + Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTPTETARLAHEAME 293 Query: 299 SL 300 SL Sbjct: 294 SL 295 >gi|126731208|ref|ZP_01747016.1| succinyl-CoA synthetase subunit alpha [Sagittula stellata E-37] gi|126708510|gb|EBA07568.1| succinyl-CoA synthetase subunit alpha [Sagittula stellata E-37] Length = 298 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 140/302 (46%), Positives = 201/302 (66%), Gaps = 13/302 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+ T+V+VQGL+G+ G FH ++ I Y T+VV G+ P KG T +N PVF Sbjct: 1 MAILIKDTTRVVVQGLSGRIGQFHAQEMIEYG-TKVVAGVTPGKGGTTV----LNRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E+T A AS+++VPP+ A DA++E+ EA I VC+T+GIP DM+RVK L + Sbjct: 56 TVREAVEQTGATASLLFVPPAFAADAMMEAAEAGIETAVCVTDGIPAQDMMRVKRFLRRF 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 RLIGPNC GI++P +GIMP I+ G VGI+ RSGTL YEA Q G+G Sbjct: 116 PRDRKMRLIGPNCAGIISPGQGFMGIMPPHIYTAGRVGIIGRSGTLGYEAASQMQALGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+++GIGGDP+ G+ F D+LELF D T++++M+GEIGG E EA+++++D Sbjct: 176 ISSSIGIGGDPINGSSFRDILELFENDPDTDAVMMIGEIGGPQEAEASEYVRDHM----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+ ++AG AP GR MGHAGA+IS A++K++ + GI +AP+P+ +G ++ + Sbjct: 232 KPVAAYIAGLAAPKGRKMGHAGAIISAFGESAQEKVDMLSAVGITVAPNPSAMGETVARM 291 Query: 297 LG 298 LG Sbjct: 292 LG 293 >gi|41406995|ref|NP_959831.1| succinyl-CoA synthetase subunit alpha [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395346|gb|AAS03214.1| SucD [Mycobacterium avium subsp. paratuberculosis K-10] Length = 300 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 151/307 (49%), Positives = 204/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQVVGG++ +K T + G +V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHT-ALMLKAGTQVVGGVNARKAGTTVSHVDPVGKDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV+EA + T AN SV++VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGTVSEAMKETGANVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 ++K +R+IGPNCPGI+TP GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 YNVDKGQKTRIIGPNCPGIITPGEALAGITPANISGPGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G ST++GIGGDP+ GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTSIGIGGDPIIGTTHIDAIEAFEKDPDTKIIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILQSL 300 >gi|302345487|ref|YP_003813840.1| succinate-CoA ligase (ADP-forming), alpha subunit [Prevotella melaninogenica ATCC 25845] gi|302149358|gb|ADK95620.1| succinate-CoA ligase (ADP-forming), alpha subunit [Prevotella melaninogenica ATCC 25845] Length = 290 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 142/297 (47%), Positives = 199/297 (67%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TK++VQG+TG+ G+FH + Y T VVGG P K G +PVF Sbjct: 1 MSILINKDTKLIVQGITGRDGSFHASKMKEYG-TNVVGGTSPGKAGQEVCG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T ANAS+I+VP A DA++E+I+ + L++CITEG+P LD V + + Sbjct: 56 TVKDAVAATGANASIIFVPAPFAKDAMLEAIDGGVELVICITEGVPTLDAVAAQRYAKIK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPG+++P+ GIMP +IF+KG G++SRSGTLTYE V+ +Q GLGQSTA Sbjct: 116 GVKVIGPNCPGLISPEESMAGIMPTNIFKKGHTGVISRSGTLTYEVVYNLTQAGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDPV G F ++L +F D T+SI ++GEIGG AEE AA+F+K+ KP+ Sbjct: 176 VGVGGDPVVGLYFEELLRMFQDDPETDSIALIGEIGGDAEERAAKFIKEHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F++G+ APPG+ MGHAGA+IS G G A +KI A + G+ +A + I L + L Sbjct: 232 VFISGQQAPPGKQMGHAGAIISSGSGSASEKIAAFEAVGVPVARETSEIPELLKKQL 288 >gi|254773955|ref|ZP_05215471.1| succinyl-CoA synthetase subunit alpha [Mycobacterium avium subsp. avium ATCC 25291] Length = 300 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 151/307 (49%), Positives = 204/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQVVGG++ +K T + G +V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHT-ALMLKAGTQVVGGVNARKAGTTVSHVDPVGKDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV+EA + T AN SV++VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGTVSEAMKETGANVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 ++K +R+IGPNCPGI+TP GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 YNVDKGQKARIIGPNCPGIITPGEALAGITPANISGPGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G ST++GIGGDP+ GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTSIGIGGDPIIGTTHIDAIEAFEKDPDTKIIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 236 --SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILQSL 300 >gi|213692044|ref|YP_002322630.1| succinyl-CoA synthetase, alpha subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523505|gb|ACJ52252.1| succinyl-CoA synthetase, alpha subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320458156|dbj|BAJ68777.1| succinyl-CoA synthase alpha subunit [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 303 Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 128/303 (42%), Positives = 195/303 (64%), Gaps = 15/303 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNVNV 56 + ++ V+VQG+TG G HT + +L T +VGG++P+K + T G + ++ Sbjct: 2 LFIEDGAPVIVQGMTGHQGMTHTAR-MLNAGTNIVGGVNPRKAGMHVTFPGAQGGADADI 60 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF T A+A+E T A ASV++VPP A A++E++EA I LIV ITEGIPV D Sbjct: 61 PVFATCADAREATGAKASVVFVPPKFAKSAVVEAVEAGIELIVVITEGIPVADSSYFVEL 120 Query: 117 LEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 R+IGPNCPG++T + +GI+P I +G +G++S+SGTLTY+ + + S Sbjct: 121 ALTRGVRIIGPNCPGLITLGNPGVNLGIIPDGIVGRGPLGLVSKSGTLTYQLMGELSD-- 178 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G + +G GGDP+ GT ++ L+ F AD T++++M+GEIGG AE++AA + AK Sbjct: 179 IGFTGCLGAGGDPIVGTTLLEALQAFEADPDTKAVMMIGEIGGFAEQDAAAW----AKEH 234 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK NA++ AGI + +P + + Sbjct: 235 MTKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKNALEAAGIPVGKTPGQAAEIMR 294 Query: 295 ELL 297 ++L Sbjct: 295 DIL 297 >gi|242279515|ref|YP_002991644.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242122409|gb|ACS80105.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 698 Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 123/294 (41%), Positives = 187/294 (63%), Gaps = 9/294 (3%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 +DK+T +LVQG+TG G HT+ + Y + +V G+ P KG G VPV+ ++ E Sbjct: 409 IDKDTPILVQGITGAEGRLHTKLMLEYG-SNIVAGVTPFKGGQEVLG----VPVYNSIKE 463 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 A+ AS+I+VPP A DAI+E+ E+P +VCITEGI M+ V +++ +R+ Sbjct: 464 AQRHHEIGASIIFVPPKLATDAILEAASCEVPWVVCITEGIVQSAMLNVLEQIKGGKTRI 523 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPN PG++ P KIGI+P + F G V +LSRSGTLTYE + +Q G+GQS ++GIG Sbjct: 524 VGPNTPGMIVPGQTKIGILPTTPFSPGPVAVLSRSGTLTYEVADRLNQVGIGQSLSIGIG 583 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 GD GT F DV E+ + T++++++GEIGG+AE++ A ++ + G KP++ F+A Sbjct: 584 GDSYIGTTFADVFEMLRNHDETKAVMVLGEIGGTAEQDLADYV---IETGFDKPVLSFIA 640 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G+TAPPG+ +GHAGA++ G G + K+ M+ AG + PS I + + LG Sbjct: 641 GQTAPPGKRLGHAGAILQEGT-GVQGKLEKMRAAGFTVCPSLESIPQLTADALG 693 >gi|315103906|gb|EFT75882.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL050PA2] Length = 297 Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 142/302 (47%), Positives = 198/302 (65%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVF 59 M+I++D+N+K++VQG+TG G HT Q +L VVGG++P+K G+T G VPV+ Sbjct: 1 MAIILDQNSKIIVQGMTGSEGMKHT-QRMLDSGAAVVGGVNPRKAGTTVDFNGGTTVPVY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA E T AN SVI+VP A++E+IEAE+PL+VCITEG+PV D ++ Sbjct: 60 GSVKEAVEATGANVSVIFVPAKFTKSAVMEAIEAEMPLVVCITEGVPVKDTAEFFTAAQR 119 Query: 120 S-SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S +R+IGPNCPGI++P GI+P I G VG++S+SGTLTY+ +++ LG S Sbjct: 120 SGKTRIIGPNCPGIISPGKSNAGIVPADITGPGRVGLVSKSGTLTYQLMYEVRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA+++ + KP Sbjct: 178 TAIGIGGDPIIGTTHIDALQAFQDDPETDIIVMIGEIGGDAEERAAKYISEHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P R E + Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTPTETARLAHEAME 293 Query: 299 SL 300 SL Sbjct: 294 SL 295 >gi|314924239|gb|EFS88070.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL001PA1] gi|314964913|gb|EFT09012.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL082PA2] gi|315093787|gb|EFT65763.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL060PA1] gi|327325606|gb|EGE67405.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL103PA1] Length = 297 Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 142/302 (47%), Positives = 198/302 (65%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVF 59 M+I++D+N+K++VQG+TG G HT Q +L VVGG++P+K G+T G VPV+ Sbjct: 1 MAIILDQNSKIIVQGMTGSEGMKHT-QRMLDSGAAVVGGVNPRKAGATVDFNGGTTVPVY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA E T AN SVI+VP A++E+IEAE+PL+VCITEG+PV D ++ Sbjct: 60 GSVKEAVEATGANVSVIFVPAKFTKSAVMEAIEAEMPLVVCITEGVPVKDTAEFFTAAQR 119 Query: 120 S-SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S +R+IGPNCPGI++P GI+P I G VG++S+SGTLTY+ +++ LG S Sbjct: 120 SGKTRIIGPNCPGIISPGKSNAGIVPADITGPGRVGLVSKSGTLTYQLMYEVRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA+++ + KP Sbjct: 178 TAIGIGGDPIIGTTHIDALQAFQDDPETDIIVMIGEIGGDAEERAAKYISEHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P R E + Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTPTETARLAHEAME 293 Query: 299 SL 300 SL Sbjct: 294 SL 295 >gi|229817639|ref|ZP_04447921.1| hypothetical protein BIFANG_02909 [Bifidobacterium angulatum DSM 20098] gi|229785428|gb|EEP21542.1| hypothetical protein BIFANG_02909 [Bifidobacterium angulatum DSM 20098] Length = 306 Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 129/300 (43%), Positives = 196/300 (65%), Gaps = 19/300 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGS---TY---WTGGNV 54 M++ ++ + V+VQG+TG G HT + +L T +VGG++ +K TY G + Sbjct: 1 MALFIEDDAPVIVQGITGHQGMVHTAR-MLKAGTNIVGGVNARKAGLDVTYPAARNGEDA 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + VF + AEAK T A ASV++VPP A DA++E+IEA I LIV ITEGIPV D Sbjct: 60 TIHVFASCAEAKAATGAVASVVFVPPRFAKDAVVEAIEAGIKLIVVITEGIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCK------IGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ R++GPNCPG++T S + +GI+P I ++G +G++S+SGTLTY+ + Sbjct: 120 ELALRNGVRIVGPNCPGLVTFASSEQTHGVNLGIIPDGIVKRGPLGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G GGDP+ GT ++ L+ F ADE T++++M+GEIGG+AE++AAQ+ Sbjct: 180 ELSD--IGFTACLGAGGDPIVGTTLVEALQAFEADENTKAVMMIGEIGGNAEQDAAQW-- 235 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 A KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK A++ GI + +PA+ Sbjct: 236 --ASEHMTKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKEALEAVGIKVGRTPAQ 293 >gi|326479223|gb|EGE03233.1| succinyl-CoA synthetase subunit alpha [Trichophyton equinum CBS 127.97] Length = 683 Score = 234 bits (598), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 126/293 (43%), Positives = 192/293 (65%), Gaps = 10/293 (3%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 +T+VL QG T +A T + ++++ + T++VGG+ P G ++ +P+F +V A+E Sbjct: 55 HTRVLFQGFTAQA-TANVKESLAWG-TKIVGGVKPG-----IAGEHLGLPIFPSVRVAQE 107 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIG 126 ++ +AS +YVP S AI E++EAEIPLIV + E +P+ DM+R+ + L+ +S SRL+G Sbjct: 108 KSKPDASAVYVPGSQTAKAIEEALEAEIPLIVAVAEHVPIHDMLRIHSMLKTQSKSRLVG 167 Query: 127 PNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 PNCPGI++ C+IG P F G++GI+++SGTL YE V T++ GLGQS +G+GG Sbjct: 168 PNCPGIISAIGKCRIGFQPLPCFAPGNIGIVAKSGTLGYETVASTTRAGLGQSLCIGMGG 227 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPIVGFVA 244 D + GT+F+D L++F D+ T I+MVGEIGG AE EAA+++K +R KPI+ + Sbjct: 228 DVLAGTDFVDALKVFEHDDDTHGIIMVGEIGGEAEMEAAEWIKRYRRRTSEAKPIMALIG 287 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G AP GR MGHAGA + G+ A KI A++ AG+ + P + G + LL Sbjct: 288 GIEAPHGRVMGHAGAWTATGEPDARTKIQALQSAGVVMVDHPEKFGEGMKVLL 340 >gi|282855096|ref|ZP_06264428.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes J139] gi|282581684|gb|EFB87069.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes J139] gi|314982170|gb|EFT26263.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL110PA3] gi|315090401|gb|EFT62377.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL110PA4] Length = 297 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 142/302 (47%), Positives = 198/302 (65%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVF 59 M+I++D+N+K++VQG+TG G HT Q +L VVGG++P+K G+T G VPV+ Sbjct: 1 MAIILDQNSKIIVQGMTGSEGMKHT-QRMLDSGAAVVGGVNPRKAGTTVDFNGGTTVPVY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA E T AN SVI+VP A++E+IEAE+PL+VCITEG+PV D ++ Sbjct: 60 GSVKEAIEATGANVSVIFVPAKFTKSAVMEAIEAEMPLVVCITEGVPVKDTAEFFTAAQR 119 Query: 120 S-SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S +R+IGPNCPGI++P GI+P I G VG++S+SGTLTY+ +++ LG S Sbjct: 120 SGKTRIIGPNCPGIISPGKSNAGIVPADITGPGRVGLVSKSGTLTYQLMYEVRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA+++ + KP Sbjct: 178 TAIGIGGDPIIGTTHIDALQAFQDDPETDIIVMIGEIGGDAEERAAKYISEHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P R E + Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTPTETARLAHEAME 293 Query: 299 SL 300 SL Sbjct: 294 SL 295 >gi|313835933|gb|EFS73647.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL037PA2] gi|314927224|gb|EFS91055.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL044PA1] gi|314970657|gb|EFT14755.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL037PA3] gi|328906124|gb|EGG25899.1| succinyl-CoA synthetase, alpha subunit [Propionibacterium sp. P08] Length = 297 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 141/302 (46%), Positives = 198/302 (65%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVF 59 M+I++D+N+K++VQG+TG G HT Q +L T VVGG++P+K G+T G VPV+ Sbjct: 1 MAIILDQNSKIIVQGMTGSEGMKHT-QRMLDSGTAVVGGVNPRKAGTTVDFNGGTTVPVY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V E E T AN SVI+VP A++E++EAE+PL+VCITEG+PV D ++ Sbjct: 60 GSVKETVEATGANVSVIFVPAKFTKSAVMEAVEAEMPLVVCITEGVPVKDTSEFFTAAQR 119 Query: 120 S-SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S +R+IGPNCPGI++P GI+P I G VG++S+SGTLTY+ +++ LG S Sbjct: 120 SGKTRIIGPNCPGIISPGKSNAGIVPADITGPGRVGLVSKSGTLTYQLMYEVRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA+++ + KP Sbjct: 178 TAIGIGGDPIIGTTHIDALQAFQDDPETDIIVMIGEIGGDAEERAAKYISEHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P R E + Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTPTETARLAHEAMD 293 Query: 299 SL 300 SL Sbjct: 294 SL 295 >gi|126178790|ref|YP_001046755.1| succinyl-CoA synthetase, alpha subunit [Methanoculleus marisnigri JR1] gi|125861584|gb|ABN56773.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methanoculleus marisnigri JR1] Length = 288 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 133/296 (44%), Positives = 182/296 (61%), Gaps = 16/296 (5%) Query: 6 DKNTKVLVQGLTGKAGTFHTEQAILYCQ----TQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 DKN V+VQ +TG+ GTFHTE Y + VV G+ P K G VPV+ T Sbjct: 5 DKNLGVIVQNITGRQGTFHTELMNAYAREVGGRGVVAGVAPGKAGREVHG----VPVYNT 60 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA A ASV++VP AGDA++E+ A I L V ITE IPV D + A + Sbjct: 61 VKEALAEHDATASVVFVPAGAAGDAVMEAAHAGIELAVVITEHIPVHDAMSAIAYAKLHD 120 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +IGPNCPG+L+P CK+GIMP + R+G+VG++SRSGTLTYE + ++ G+GQST V Sbjct: 121 CTVIGPNCPGLLSPGECKLGIMPAHLARRGNVGVVSRSGTLTYEVFDELTRAGIGQSTIV 180 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDPV G F+DVL F D T++++++GE+GG+ EEE R P+V Sbjct: 181 GIGGDPVIGQTFVDVLARFDEDPHTKAVIVIGEVGGNLEEEGV--------RSTDLPVVT 232 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG +APP + MGHAGA+I GG+G A K+ ++ I +A P+ I + E+L Sbjct: 233 YIAGVSAPPEKRMGHAGAIIEGGEGDARSKVRRLRALEIPVASRPSEIPGLIREVL 288 >gi|145539904|ref|XP_001455642.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124423450|emb|CAK88245.1| unnamed protein product [Paramecium tetraurelia] Length = 310 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 138/301 (45%), Positives = 181/301 (60%), Gaps = 20/301 (6%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFTT 61 + V+K+TKV+ QG+TG GTF TEQA+ Y T++VGG+ PKK GST+ + +PVF Sbjct: 18 VWVNKHTKVICQGITGNQGTFQTEQALNYF-TKMVGGVSPKKAGSTH-----LGLPVFKN 71 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 EAK+ T +ASVIYVPP A AIIE+IEA+I L+V IT+GIP DM++VK L S Sbjct: 72 CQEAKQNTGCDASVIYVPPPTAASAIIEAIEAQIGLVVVITDGIPQHDMIKVKHALRSQS 131 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPGI+ P+ CKIGIMPG I + G +GI+SRSGTLTYEAV QT T Sbjct: 132 VTRVIGPNCPGIIKPNECKIGIMPGYIHQNGKIGIVSRSGTLTYEAVDQT--------TR 183 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK--- 237 G+G V G Sbjct: 184 AGLGQSTVVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 243 Query: 238 -PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 IVGF+AG TAPP R MGHAGA++S GKG A +KI A+++AGI + SPA+IG++++E+ Sbjct: 244 XSIVGFIAGITAPPERRMGHAGAIVSKGKGSAPEKIRALEQAGIRVVKSPAQIGKTMLEV 303 Query: 297 L 297 + Sbjct: 304 M 304 >gi|260591648|ref|ZP_05857106.1| succinyl-CoA synthetase subunit alpha [Prevotella veroralis F0319] gi|260536448|gb|EEX19065.1| succinyl-CoA synthetase subunit alpha [Prevotella veroralis F0319] Length = 290 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 139/289 (48%), Positives = 195/289 (67%), Gaps = 9/289 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNT+++VQG+TG+ G+FH + Y T VVGG P K G +PVF Sbjct: 1 MSILINKNTRLIVQGITGRDGSFHASKMKEYG-TNVVGGTSPGKAGQEVCG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A T AN S+I+VP A DA++E+I+ I L++CITEG+P LD V + + Sbjct: 56 TMKDAVAATQANTSIIFVPAPFAKDAMLEAIDGGIQLVICITEGVPTLDAVAAQHYAKVH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPG+++P+ GIMP +IF+KG G++SRSGTLTYE V +Q GLGQSTA Sbjct: 116 GVKVIGPNCPGLISPEESMAGIMPTNIFKKGHTGVISRSGTLTYEVVHNLTQAGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDPV G F ++L++F D T+SI ++GEIGG AEE AA+F+K+ KP+ Sbjct: 176 VGVGGDPVVGLYFEELLQMFQDDPETDSIALIGEIGGDAEERAAKFIKEHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 F++G+ APPG+ MGHAGA+IS G G A +KI A + G+ +A + I Sbjct: 232 VFISGQQAPPGKQMGHAGAIISSGSGSASEKIAAFEAVGVPVARETSEI 280 >gi|58697433|ref|ZP_00372733.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Drosophila simulans] gi|58536144|gb|EAL59750.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Drosophila simulans] Length = 187 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 115/188 (61%), Positives = 143/188 (76%), Gaps = 3/188 (1%) Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 MV+VK L S SRLIGPNCPGI+TP+ CKIGIMPG I ++G +GI+SRSGTLTYEAV Q Sbjct: 1 MVKVKRALIGSKSRLIGPNCPGIITPEECKIGIMPGHIHKRGHIGIMSRSGTLTYEAVAQ 60 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 T+ GLGQST +GIGGDP+ G F+D +ELFL D T IV++GEIGG+ EE+ + F+K Sbjct: 61 TTAVGLGQSTCIGIGGDPIHGMTFVDCMELFLKDNDTHGIVVIGEIGGNEEEDVSHFVKA 120 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 E KKPIVGFVAG+TAPPGR MGHAGA+IS G A K+ M+ AGI IA +PA I Sbjct: 121 EKT---KKPIVGFVAGQTAPPGRRMGHAGAIISSSGGSAGAKLEVMRSAGIAIAETPAVI 177 Query: 290 GRSLVELL 297 G+ ++E++ Sbjct: 178 GKKVLEVM 185 >gi|167957427|ref|ZP_02544501.1| succinyl-CoA synthetase, alpha subunit [candidate division TM7 single-cell isolate TM7c] Length = 286 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 123/281 (43%), Positives = 177/281 (62%), Gaps = 10/281 (3%) Query: 10 KVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT 69 V++QG+TGK G FH + Y +T +V G P + + G VPVF T+ + K+R Sbjct: 10 NVIIQGITGKNGRFHARNMLDY-KTSIVAGTSPNQAISEVHG----VPVFRTIDDIKKRF 64 Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC 129 A + SVI+VP A AI+E+I+A+IPLI+CITEG+PV DM+ +K +L +S S LIGPNC Sbjct: 65 AIDISVIFVPAPHAKAAILEAIQAQIPLIICITEGVPVHDMLEIKQKLHRSRSVLIGPNC 124 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 PG+L P +GI+P S+ G I+SRSGTLTYEA+ +Q G GQ +GIGGD + Sbjct: 125 PGVLLPGRQLLGIIPASLAVPGDTAIVSRSGTLTYEAMSLLTQAGFGQRYIIGIGGDMIS 184 Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP 249 G+ F+D L+LF D + + IVM+GEIGG +E AA ++K KP+ ++AG +AP Sbjct: 185 GSSFVDCLQLFQNDPSVKRIVMIGEIGGISEITAADYIKQSI----NKPVYAYIAGHSAP 240 Query: 250 PGRTMGHAGAVI-SGGKGGAEDKINAMKEAGICIAPSPARI 289 G MGH GA++ + A K +++AG A S +++ Sbjct: 241 AGIQMGHTGAILGTNALESAATKTAYLQQAGAITANSISQL 281 >gi|241554587|ref|XP_002399517.1| succinyl-CoA synthetase, alpha subunit, putative [Ixodes scapularis] gi|215501704|gb|EEC11198.1| succinyl-CoA synthetase, alpha subunit, putative [Ixodes scapularis] Length = 217 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 129/209 (61%), Positives = 169/209 (80%), Gaps = 1/209 (0%) Query: 88 IESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSRLIGPNCPGILTPDSCKIGIMPGS 146 +E++EAE+PL+VCITEGIP DMVRVK +L ++S +RL+GPNCPGI+ P+ CKIGIMPG Sbjct: 1 MEAVEAEVPLVVCITEGIPQQDMVRVKNQLMQQSKTRLVGPNCPGIIKPEECKIGIMPGH 60 Query: 147 IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 I +KG +GI+SRSGTLTYEAV QT+Q GLGQS VGIGGDP GT FID L++FL D T Sbjct: 61 IHQKGKIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTNFIDCLDIFLHDPET 120 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKG 266 + I+++GEIGG+AEE AA+FL+ KP+V F+AG TAPPGR MGHAGA+I+GGKG Sbjct: 121 KGIILIGEIGGNAEESAAEFLEKHNSGTSAKPVVSFIAGLTAPPGRRMGHAGAIIAGGKG 180 Query: 267 GAEDKINAMKEAGICIAPSPARIGRSLVE 295 GA++KI A+K AG+ + SPA++G ++++ Sbjct: 181 GAKEKIEALKAAGVTVTKSPAQMGAAMLQ 209 >gi|154487340|ref|ZP_02028747.1| hypothetical protein BIFADO_01190 [Bifidobacterium adolescentis L2-32] gi|154083858|gb|EDN82903.1| hypothetical protein BIFADO_01190 [Bifidobacterium adolescentis L2-32] Length = 307 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 132/311 (42%), Positives = 193/311 (62%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNV 54 M++ ++ V+VQG+TG G HT + +L T +VGG++ +K T G + Sbjct: 1 MTLFIEDGAPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNARKAGLDVTFPEAKNGEDA 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + VF +EA E T A ASV++VPP A DA++E+IEA I LIV I E IPV D Sbjct: 60 TIHVFANCSEAIEATGAKASVVFVPPRFAKDAVVEAIEAGIELIVVIAESIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGILT-PDS-----CKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R++GPNCPG+LT P S C +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALRKGVRIVGPNCPGLLTLPSSKDAKGCNLGIIPDGIVSRGPLGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G GGDP+ GT + LE F DEAT+++VM+GEIGGSAE++AA++ Sbjct: 180 ELSD--IGFTACLGAGGDPIVGTTLQEALEAFENDEATKAVVMIGEIGGSAEQDAAKW-- 235 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 A KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK A++ GI + +P + Sbjct: 236 --ASEHMTKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKEALEAVGIRVGRTPGQ 293 Query: 289 IGRSLVELLGS 299 + E+L S Sbjct: 294 TAEIMREVLAS 304 >gi|239916965|ref|YP_002956523.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Micrococcus luteus NCTC 2665] gi|239838172|gb|ACS29969.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Micrococcus luteus NCTC 2665] Length = 306 Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 149/309 (48%), Positives = 206/309 (66%), Gaps = 19/309 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT + +L T +VGG++ +K T + G V Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHT-RLMLKAGTNIVGGVNARKAGTTVSHEDKDGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV EA E+T A+ SV +VPP+ A DA IE+IEAEIPL+V ITEGIPV D + A Sbjct: 60 LPVFGTVKEAMEKTGADVSVAFVPPAFAKDAAIEAIEAEIPLLVVITEGIPVQDTAKFFA 119 Query: 116 RLE-------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + K +R+IGPNCPG++TP GI P +I G +G++S+SGTLTY+ ++ Sbjct: 120 LSQSKTGEDGKPKTRIIGPNCPGVITPGEALAGITPATITGSGPIGLVSKSGTLTYQMMY 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + G STA+GIGGDP+ GT ID LE F AD T++IVM+GEIGG AEE AA+F+K Sbjct: 180 ELRD--FGFSTAIGIGGDPIIGTTHIDALEAFEADPDTQAIVMIGEIGGDAEERAAEFIK 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 238 ANV----TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSE 293 Query: 289 IGRSLVELL 297 + + E+L Sbjct: 294 TAQLMREIL 302 >gi|330721100|gb|EGG99234.1| Malate--CoA ligase [ADP-forming] alpha chain [gamma proteobacterium IMCC2047] Length = 295 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 135/301 (44%), Positives = 190/301 (63%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+ ++V+VQG TGK TFH E + Y T VVGG P +G G PVF Sbjct: 1 MAILITDKSRVIVQGFTGKIATFHAEDMMSY-GTNVVGGTTPGRGGETHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + A+AS+I+VP A DAI+E+ EA I V IT+GIP DM+RVK ++ Sbjct: 56 TVQDAVQHEGADASIIFVPGPFAADAIMEAAEAGIKFCVAITDGIPAQDMIRVKRYMKAF 115 Query: 121 SSR----LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S L GPNC G ++P +GIMP I+ G VG++ RSGTL YEA Q + G+G Sbjct: 116 SKESKMVLTGPNCAGSISPGKAMLGIMPSHIYTPGRVGVIGRSGTLGYEAAVQMADHGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+++GIGGDP+ G+ F D LELF D T++I+M+GEIGGS E +AA++ +D + Sbjct: 176 ISSSIGIGGDPINGSGFKDHLELFDKDPETDAILMIGEIGGSQEVKAAEWARDNC----E 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ ++AG TAP GRTMGHAGA++S A +K+ ++ G+ +A P+ IG ++ E Sbjct: 232 KPVISYIAGLTAPKGRTMGHAGAIVSSSGESAAEKVELLRACGVSVAVRPSDIGTTVAEA 291 Query: 297 L 297 L Sbjct: 292 L 292 >gi|315605036|ref|ZP_07880090.1| succinyl-CoA synthetase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313315|gb|EFU61378.1| succinyl-CoA synthetase [Actinomyces sp. oral taxon 180 str. F0310] Length = 306 Score = 232 bits (591), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 140/311 (45%), Positives = 193/311 (62%), Gaps = 21/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT---------- 50 M+I V+ +T+V+VQG+TG G HT Q +L T VVGG +P+K T T Sbjct: 1 MTIFVNSDTRVIVQGMTGAEGRKHT-QRMLSAGTAVVGGTNPRKAGTTVTFDVVGYGPAA 59 Query: 51 ----GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G + VPV+ TVAEA+E T ANASVI+VPP+ A A +E+I+A I IV ITEGIP Sbjct: 60 GRVADGQIEVPVYGTVAEAREATGANASVIFVPPAFAKAAALEAIDAGIETIVLITEGIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D V + RLIGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VQDSTIVVEHALAAGVRLIGPNCPGIISPGQANLGITPADITGPGRLGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ G +T +GIGGDPV GT ID L F D T+ ++M+GEIGG AEE AA++ Sbjct: 180 MYELRD--FGFTTCLGIGGDPVVGTTHIDALAAFEEDPDTDLVIMIGEIGGDAEERAAEW 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 + + KP+V ++AG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 I----SQNMTKPVVAYIAGFTAPEGKTMGHAGAIVSGSSGTASAKAAALEAVGVRVGRTP 293 Query: 287 ARIGRSLVELL 297 ++ + ELL Sbjct: 294 SQTAQIARELL 304 >gi|48478074|ref|YP_023780.1| succinyl-CoA synthetase subunit alpha [Picrophilus torridus DSM 9790] gi|48430722|gb|AAT43587.1| succinyl-CoA synthetase alpha chain [Picrophilus torridus DSM 9790] Length = 284 Score = 231 bits (590), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 127/287 (44%), Positives = 185/287 (64%), Gaps = 10/287 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 +L+++NT+V++QG+TG G+FH+ + +L T +V G+ P KG + N+PV+ T+ Sbjct: 2 VLINRNTRVIIQGITGHQGSFHSGE-MLKFGTNIVAGVSPGKGGSKIN----NIPVYDTI 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E + +A++I VP DA +E+I+ I I +TE +PV D + + + ++ + Sbjct: 57 DEVMD-LKPDATMISVPAPFVKDAALEAIDHGIKFIYILTEHVPVQDTMEIVNQAKRKNI 115 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PGI KIGIMP +IFRKG V + SRSGTLTYE V +Q GLG+ST +G Sbjct: 116 FMIGPNGPGITVVGESKIGIMPNNIFRKGRVAVASRSGTLTYEIVNAITQAGLGESTVIG 175 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GGDP+ GT F +V+ +F D T+ IVMVGEIGGS EE AA ++K+ K+ G+ Sbjct: 176 LGGDPIVGTTFTEVVRIFNEDPETDMIVMVGEIGGSEEERAASYVKEHVKKKVV----GY 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + G++APPG+ MGHAGA+I G G AE KI A + AGI +A P +I Sbjct: 232 ITGRSAPPGKRMGHAGAIIEKGAGTAESKIRAFESAGIKVAEYPYQI 278 >gi|225352122|ref|ZP_03743145.1| hypothetical protein BIFPSEUDO_03737 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157369|gb|EEG70708.1| hypothetical protein BIFPSEUDO_03737 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 302 Score = 231 bits (590), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 130/298 (43%), Positives = 188/298 (63%), Gaps = 19/298 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNV 54 M++ ++ V+VQG+TG G HT + +L T +VGG++ +K G +V Sbjct: 8 MTLFIEDGAPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNARKAGQEVNFPAAKDGEDV 66 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + VF AEA E T A ASV++VPP A DA++E+IEA I LIV ITEGIPV D Sbjct: 67 TLRVFGNCAEAVEVTGAQASVVFVPPRFAKDAVVEAIEAGIKLIVVITEGIPVADSAYFV 126 Query: 115 ARLEKSSSRLIGPNCPGILTPDS------CKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R++GPNCPG+LT S C +GI+P I +G +G++S+SGTLTY+ + Sbjct: 127 ELALRKDVRIVGPNCPGLLTLPSTEGVNGCNLGIIPDGIVSRGPLGLVSKSGTLTYQLMG 186 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G GGDP+ GT + LE F D+AT+++VM+GEIGGSAE++AA++ Sbjct: 187 ELSD--IGFTACLGAGGDPIVGTTLQEALEAFENDDATKAVVMIGEIGGSAEQDAAKW-- 242 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 A KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK A++ GI + +P Sbjct: 243 --ASEHMTKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKEALEAVGIRVGRTP 298 >gi|310287475|ref|YP_003938733.1| Succinyl-CoA synthetase alpha chain [Bifidobacterium bifidum S17] gi|309251411|gb|ADO53159.1| Succinyl-CoA synthetase alpha chain [Bifidobacterium bifidum S17] Length = 308 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 132/309 (42%), Positives = 197/309 (63%), Gaps = 19/309 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNV 54 M+ + + V+VQG+TG G HT + +L T +VGG++P+K + T G +V Sbjct: 1 MTAFIQEGAPVIVQGMTGHQGMTHTAR-MLRAGTNIVGGVNPRKAGSQVTFEAAREGRDV 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 +VPV+ T AEAKE T A ASV++VPP A A++E++EA I LIV ITEGIPV D Sbjct: 60 SVPVYATCAEAKEATGAQASVVFVPPRFAKGAVVEAVEAGIGLIVVITEGIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGILTPDS------CKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R+IGPNCPG+LT S +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALQRGVRIIGPNCPGLLTLPSQENEHGVNLGIIPDGIVGRGPIGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G+GGDP+ GT ++ L+ F D T+++VM+GEIGGSAE++AA + Sbjct: 180 ELSD--IGFTACLGVGGDPIVGTTLLEALQEFEQDADTKAVVMIGEIGGSAEQDAAAWAA 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK A++ AGI + +P + Sbjct: 238 EH----MTKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKIALEAAGIPVGRTPGQ 293 Query: 289 IGRSLVELL 297 + ++L Sbjct: 294 TADLMRKVL 302 >gi|167933008|ref|ZP_02520095.1| succinyl-CoA synthetase, alpha subunit [candidate division TM7 single-cell isolate TM7b] Length = 284 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 117/252 (46%), Positives = 164/252 (65%), Gaps = 9/252 (3%) Query: 10 KVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT 69 V++QG+TGK G FH + Y +T +V G P + + G VPVF T+ + K+R Sbjct: 10 NVIIQGITGKNGRFHARNMLDY-KTSIVAGTSPNQAISEVHG----VPVFRTIDDIKKRF 64 Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC 129 A + SVI+VP A AI+E+I+A+IPLI+CITEG+PV DM+ +K +L +S S LIGPNC Sbjct: 65 AIDISVIFVPAPHAKAAILEAIQAQIPLIICITEGVPVHDMLEIKQKLHRSRSVLIGPNC 124 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 PG+L P +GI+P S+ G I+SRSGTLTYEA+ +Q G GQ +GIGGD + Sbjct: 125 PGVLLPGRQLLGIIPASLAVPGDTAIVSRSGTLTYEAMSLLTQAGFGQRYIIGIGGDMIS 184 Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP 249 G+ F+D L+LF D + + IVM+GEIGG +E AA ++K KP+ ++AG +AP Sbjct: 185 GSSFVDCLQLFQNDPSVKRIVMIGEIGGISEITAADYIKQSI----NKPVYAYIAGHSAP 240 Query: 250 PGRTMGHAGAVI 261 G MGH GA++ Sbjct: 241 AGIQMGHTGAIL 252 >gi|13541104|ref|NP_110792.1| succinyl-CoA synthetase subunit alpha [Thermoplasma volcanium GSS1] gi|14324488|dbj|BAB59416.1| succinyl-CoA ligase [Thermoplasma volcanium GSS1] Length = 285 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 129/293 (44%), Positives = 185/293 (63%), Gaps = 9/293 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 +L+DKNTKV+VQG+TG G+FHT + +L T VV GI P KG T + VP+ +V Sbjct: 2 VLIDKNTKVIVQGITGHQGSFHTGE-MLKFGTNVVAGIAPGKGGTKFAD---KVPIVNSV 57 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 AEA + +A++I VP DA E+I+ + ++ +TE +P D + + + + Sbjct: 58 AEAMQYEP-DATMISVPAPFVKDAAYEAIDNGLKIVYILTEHVPYQDTMEIVKEAQLRNI 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GPN PGI P KIGIMP IF++G V + SRSGTLTYE V+ ++ G+G+ST +G Sbjct: 117 TVLGPNGPGITVPFESKIGIMPNHIFKEGDVAVASRSGTLTYEIVYAITKAGMGESTVIG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GGD V G FIDVL++F D T+ IV+VGEIGG+ EE AA+++K K+ + Sbjct: 177 LGGDRVVGLSFIDVLKMFENDPKTKKIVLVGEIGGNNEELAAEYIKKNVKKKVV----AY 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 +AG++APPG+ MGHAGA+I G G AE K+ A AG+ +A P I + L E Sbjct: 233 IAGRSAPPGKRMGHAGAIIERGVGTAESKLKAFNSAGVKVADYPQDIPKLLEE 285 >gi|219852540|ref|YP_002466972.1| succinyl-CoA synthetase, alpha subunit [Methanosphaerula palustris E1-9c] gi|219546799|gb|ACL17249.1| succinyl-CoA synthetase, alpha subunit [Methanosphaerula palustris E1-9c] Length = 288 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 126/288 (43%), Positives = 177/288 (61%), Gaps = 16/288 (5%) Query: 6 DKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIH----PKKGSTYWTGGNVNVPVFTT 61 DK+ V+VQG TGK G FH Y ++ G+ P +G G VPV+ + Sbjct: 5 DKSLGVIVQGATGKQGAFHINLMNEYARSVGGRGVVAGVTPGRGGQEVHG----VPVYNS 60 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA A ASV++VP AGD+I+E+ A + L+V ITE IPV D ++ A + Sbjct: 61 VHEALAEHDATASVLFVPGKAAGDSIMEAASAGLELVVAITEHIPVHDTMKAVAYAKLHD 120 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +IGPNCPG+L+P K+GIMP +F +G VG++SRSGTLTYE V + ++ G+GQST V Sbjct: 121 CAVIGPNCPGLLSPGEVKLGIMPAHLFTRGHVGVISRSGTLTYEIVDELTRAGIGQSTVV 180 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDPV G F+D+L+ F D T ++V+VGE+GG+ E+E A PIV Sbjct: 181 GIGGDPVIGQTFVDLLDRFEEDPETRAVVLVGEVGGALEQEGAA--------STDLPIVA 232 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 ++AG +APP + MGHAGA++ GG+G A KI ++ G+ +A P+ I Sbjct: 233 YIAGVSAPPDKRMGHAGAIVEGGEGDAGSKIRHLQNQGVTVAQRPSEI 280 >gi|294101519|ref|YP_003553377.1| succinyl-CoA synthetase, alpha subunit [Aminobacterium colombiense DSM 12261] gi|293616499|gb|ADE56653.1| succinyl-CoA synthetase, alpha subunit [Aminobacterium colombiense DSM 12261] Length = 288 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 120/300 (40%), Positives = 194/300 (64%), Gaps = 13/300 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ +TKVLVQG+TG++G T+ I Y T++V G+ P KG ++PVF Sbjct: 1 MSILINADTKVLVQGITGRSGALQTQTLIEYG-TRIVAGVTPGKGGMIVH----DIPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 V+EA R A+A++ +VPP+ A DA E I++ IPL+V EGIP D++ + + Sbjct: 56 FVSEAVSRYGADAAISFVPPALAKDAAFEIIDSAIPLLVLTMEGIPQKDVLAIISYASAH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++R+IGP G++ P CK+G P +F++G VG++S+SG L+YE ++ G+GQST Sbjct: 116 NTRIIGPGAAGLIAPGKCKLGAHPARMFKEGHVGVVSKSGALSYEMGKTLTEAGIGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 V +GG P+ GT +++ELF D TE I+++GEIGG+ E +AA+++ + KP+V Sbjct: 176 VALGGGPIWGTTQKEIVELFEKDPETEIILLLGEIGGATEIKAAEYIAEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 + G++AP G+++GHAGA+I G KG A K+ A+ ++G+ +A +P R ++E++ L Sbjct: 232 SLIVGRSAPEGKSLGHAGAIIRGNKGTAASKMKALAKSGVYVAQNP----REVIEIIRKL 287 >gi|224283107|ref|ZP_03646429.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium bifidum NCIMB 41171] gi|313140256|ref|ZP_07802449.1| succinyl-CoA synthetase alpha chain protein [Bifidobacterium bifidum NCIMB 41171] gi|313132766|gb|EFR50383.1| succinyl-CoA synthetase alpha chain protein [Bifidobacterium bifidum NCIMB 41171] Length = 308 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 132/309 (42%), Positives = 197/309 (63%), Gaps = 19/309 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNV 54 M+ + + V+VQG+TG G HT + +L T +VGG++P+K + T G +V Sbjct: 1 MTAFIQEGAPVIVQGMTGHQGMTHTAR-MLRAGTNIVGGVNPRKAGSQVTFEAAREGRDV 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 +VPV+ T AEAKE T A ASV++VPP A A++E++EA I LIV ITEGIPV D Sbjct: 60 SVPVYATCAEAKEATGAQASVVFVPPRFAKGAVVEAVEAGIGLIVVITEGIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGILTPDS------CKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R+IGPNCPG+LT S +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALQRGVRIIGPNCPGLLTLPSQENEHGVNLGIIPDGIVGRGPIGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G+GGDP+ GT ++ L+ F D T+++VM+GEIGGSAE++AA + Sbjct: 180 ELSD--IGFTACLGVGGDPLVGTTLLEALQEFEQDADTKAVVMIGEIGGSAEQDAAAWAA 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK A++ AGI + +P + Sbjct: 238 EH----MTKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKIALEAAGIPVGRTPGQ 293 Query: 289 IGRSLVELL 297 + ++L Sbjct: 294 TADLMRKVL 302 >gi|307354404|ref|YP_003895455.1| succinyl-CoA synthetase subunit alpha [Methanoplanus petrolearius DSM 11571] gi|307157637|gb|ADN37017.1| succinyl-CoA synthetase, alpha subunit [Methanoplanus petrolearius DSM 11571] Length = 288 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 129/296 (43%), Positives = 183/296 (61%), Gaps = 16/296 (5%) Query: 6 DKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIH----PKKGSTYWTGGNVNVPVFTT 61 DKNT V+VQG TG+ G FH E Y ++ G+ P +G G VPV+ + Sbjct: 5 DKNTGVIVQGATGRQGAFHIELMNKYAESVGGKGVVAGVTPGRGGQDVHG----VPVYNS 60 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA A+ SV++VP AGD+I+E+ + L+V ITE IPV D ++ + Sbjct: 61 VREALLEHDASVSVLFVPGFAAGDSIMEAAYNGLDLVVAITEHIPVHDTIKAISYAGLEG 120 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +IGPNCPG ++P K+GIMP + +G+VG++SRSGTLTYE V + S+ G+GQST V Sbjct: 121 CSVIGPNCPGTMSPGELKLGIMPAQLAMRGNVGVISRSGTLTYEVVNELSRAGIGQSTIV 180 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDPV G F+DVLE F D T+++V++GE+GG+ EEE A + P+V Sbjct: 181 GIGGDPVIGETFVDVLERFENDPETKAVVLIGEVGGNLEEEGASY--------TDLPLVT 232 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG +APP + MGHAGA+++GG+G A KI ++ GI +A P+ I + ELL Sbjct: 233 YIAGVSAPPEKRMGHAGAIVAGGEGDAGSKIRRLESMGITVAEKPSDIPVLIRELL 288 >gi|16082319|ref|NP_394787.1| succinyl-CoA synthetase subunit alpha [Thermoplasma acidophilum DSM 1728] gi|10640674|emb|CAC12452.1| probable succinyl-CoA synthetase, alpha subunit [Thermoplasma acidophilum] Length = 294 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 130/293 (44%), Positives = 185/293 (63%), Gaps = 9/293 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 +L++KNTKV+VQG+TG G+FHT + +L T+VV GI P KG T + VP+ +V Sbjct: 11 VLINKNTKVIVQGITGHQGSFHTGE-MLKFGTKVVAGIAPGKGGTKFAD---KVPIVNSV 66 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 +EA + +A++I VP DA E+I+ + ++ +TE +P D + + Sbjct: 67 SEAMQYEP-DATMISVPAPYVKDAAYEAIDNGLKIVYILTEHVPYQDTMEIVKEASLRGI 125 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GPN PGI P KIGIMP IF++G V I SRSGTLTYE V+ ++ G+G+ST +G Sbjct: 126 TVLGPNGPGITVPFESKIGIMPNHIFKEGDVAIASRSGTLTYEIVYAVTKAGMGESTVIG 185 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GGD V G FIDVL++F DE T+ IV+VGEIGG+ EE AA ++K K+ + Sbjct: 186 LGGDRVVGLTFIDVLKMFEKDEKTKRIVLVGEIGGNNEELAADYIKKHVKKKVV----AY 241 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 +AG++APPG+ MGHAGA+I G G AE K+ A EAG+ +A P I + L E Sbjct: 242 IAGRSAPPGKRMGHAGAIIERGVGTAESKLKAFAEAGVKVADYPQDIPKLLEE 294 >gi|254461533|ref|ZP_05074949.1| succinyl-CoA synthase, alpha subunit [Rhodobacterales bacterium HTCC2083] gi|206678122|gb|EDZ42609.1| succinyl-CoA synthase, alpha subunit [Rhodobacteraceae bacterium HTCC2083] Length = 273 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 130/279 (46%), Positives = 173/279 (62%), Gaps = 13/279 (4%) Query: 23 FHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSG 82 FHTE + Y V G + K G T VPVF TV EA E T A AS+++VPP Sbjct: 4 FHTEDMLEYGTNVVGGVVPGKGGETVH-----GVPVFDTVKEAVEATQAEASLVFVPPPF 58 Query: 83 AGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR----LIGPNCPGILTPDSC 138 A D+I+E+ +A I VCIT+GIP DM++VK + + L GPNC G ++P Sbjct: 59 AADSIMEAADAGIRYCVCITDGIPAQDMIQVKRYMMRYPKERRMVLTGPNCAGTISPGKA 118 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 +GIMPG IF G+VGI+ RSGTL YEA Q + G+G ST+VGIGGDP+ G+ F D+LE Sbjct: 119 MLGIMPGHIFLPGNVGIIGRSGTLGYEAAAQLKERGIGVSTSVGIGGDPINGSSFRDILE 178 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 F DE T I M+GEIGG E EAA ++++ KP+V +VAG TAP GRTMGHAG Sbjct: 179 QFENDEDTHVIAMIGEIGGPQEAEAAAYIQEHV----TKPVVAYVAGLTAPKGRTMGHAG 234 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 A+IS A +K+ + AG+ +A +PA IG ++ ++ Sbjct: 235 AIISAFGESASEKVEILTAAGVTVAENPAVIGETIASVM 273 >gi|115491467|ref|XP_001210361.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114197221|gb|EAU38921.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 577 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 125/298 (41%), Positives = 191/298 (64%), Gaps = 12/298 (4%) Query: 8 NTKVLVQGLTGKAG---TFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 +T+VL QG TG + T + ++++ + T++VGG+ P G ++ +PVF +V Sbjct: 46 HTRVLFQGFTGTSAPTATANVKESLAWG-TKIVGGVKPGV-----EGEHLGLPVFPSVKA 99 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSR 123 A+E+ +AS IYVP + AI E++EAEIPL+V + E +P+ DM+R+ + L+ +S +R Sbjct: 100 AQEKARPDASAIYVPGNQTAQAIEEAVEAEIPLVVAVAEHVPIHDMLRIHSMLKTQSKTR 159 Query: 124 LIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 L+G NCPGI++ C+IG P F G VGI+++SGTL+YE V T++ GLGQS + Sbjct: 160 LVGANCPGIISAIGKCRIGFQPLPCFAPGKVGIVAKSGTLSYETVASTTRAGLGQSLCIS 219 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPIVG 241 +GGD + GT F+D L++F D TE +++VGEIGG+AE +AA+++KD +R KPI+ Sbjct: 220 MGGDVLAGTNFVDALKIFEDDPDTEGMIIVGEIGGTAEMDAAEWIKDYNRRTANPKPIMA 279 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V G AP GR MGHAGA + G+ G E+K A++ AG + P + G + LL S Sbjct: 280 LVGGLYAPSGRIMGHAGAWTAIGEPGPEEKYQALERAGAVMVNHPEKFGERMKTLLAS 337 >gi|311064390|ref|YP_003971115.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium bifidum PRL2010] gi|310866709|gb|ADP36078.1| SucD Succinyl-CoA synthetase alpha chain [Bifidobacterium bifidum PRL2010] Length = 308 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 132/309 (42%), Positives = 197/309 (63%), Gaps = 19/309 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNV 54 M+ + + V+VQG+TG G HT + +L T +VGG++P+K + T G +V Sbjct: 1 MTAFIKEGAPVIVQGMTGHQGMTHTAR-MLRAGTNIVGGVNPRKAGSQVTFEAAREGRDV 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 +VPV+ T AEAKE T A ASV++VPP A A++E++EA I LIV ITEGIPV D Sbjct: 60 SVPVYATCAEAKEATGAQASVVFVPPRFAKGAVVEAVEAGIGLIVVITEGIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGILTPDS------CKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R+IGPNCPG+LT S +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALQRGVRIIGPNCPGLLTLPSQENEHGVNLGIIPDGIVGRGPIGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G+GGDP+ GT ++ L+ F D T+++VM+GEIGGSAE++AA + Sbjct: 180 ELSD--IGFTACLGVGGDPIVGTTLLEALQEFEQDADTKAVVMIGEIGGSAEQDAAAWAA 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK A++ AGI + +P + Sbjct: 238 EH----MTKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKIALEVAGIPVGRTPGQ 293 Query: 289 IGRSLVELL 297 + ++L Sbjct: 294 TADLMRKVL 302 >gi|237803498|ref|ZP_04591083.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025480|gb|EGI05536.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. oryzae str. 1_6] Length = 196 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 117/200 (58%), Positives = 146/200 (73%), Gaps = 5/200 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T ++N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTT----HLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVDTTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVVLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELF 200 VGIGGDP+ G+ FID+L+LF Sbjct: 176 VGIGGDPIPGSNFIDILKLF 195 >gi|119495818|ref|XP_001264686.1| CoA-ligase, putative [Neosartorya fischeri NRRL 181] gi|119412848|gb|EAW22789.1| CoA-ligase, putative [Neosartorya fischeri NRRL 181] Length = 629 Score = 228 bits (582), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 122/286 (42%), Positives = 185/286 (64%), Gaps = 9/286 (3%) Query: 16 LTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASV 75 G+ T + ++++ + T++VGG+ P G ++ +PVF +V A+ER +AS Sbjct: 2 FAGRQATANVKESLAWG-TKIVGGVKPGV-----EGEHLGLPVFPSVRAAQERAKPDASA 55 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILT 134 IYVP + AI E++EAEIPL+V + E +P+ DM+RV + L+ +S +RL+G NCPGI++ Sbjct: 56 IYVPGNQTAKAIEEAVEAEIPLVVAVAEHVPIHDMLRVHSMLQTQSKTRLVGANCPGIIS 115 Query: 135 P-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 C+IG P F G VGI+++SGTL+YE V T++ GLGQS + +GGD + GT F Sbjct: 116 AIGKCRIGFQPLPCFSPGKVGIVAKSGTLSYETVASTTRAGLGQSLCISMGGDVLAGTNF 175 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPIVGFVAGKTAPPGR 252 +D L++F D TE I++VGEIGG+AE +AA++++D KR KPI+ V G+ APPGR Sbjct: 176 VDALKVFEEDPDTEGIILVGEIGGTAEIDAAEWIRDYNKRTANPKPIMALVGGQEAPPGR 235 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 MGHAGA I+ G+ A K A++ AG+ + P + G+ + LL Sbjct: 236 VMGHAGAWIAPGEPDAVAKHRALESAGVTMVDHPEKFGQGMKALLA 281 >gi|23012767|ref|ZP_00052773.1| COG0074: Succinyl-CoA synthetase, alpha subunit [Magnetospirillum magnetotacticum MS-1] Length = 246 Score = 228 bits (581), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 117/246 (47%), Positives = 162/246 (65%), Gaps = 8/246 (3%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV EA + T A S+ +V P A DAI+E+ +A + L+ IT+GIP DM+RVK Sbjct: 1 MPVFNTVKEAVDATGATTSITFVAPPFAADAIMEAADAGLKLVCSITDGIPAQDMMRVKR 60 Query: 116 RLEK----SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 L + + ++GPNC GI++P +GIMPG I+ G VG++SRSGTL YEA Q Sbjct: 61 YLRRYPKDKRTMVVGPNCAGIISPGKSMLGIMPGHIYLPGKVGVISRSGTLGYEAAAQMK 120 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + G+G ST+VGIGGDP+ G+ F+D L LF D TE+++M+GEIGG E EA+ ++K+ Sbjct: 121 ELGIGISTSVGIGGDPINGSSFLDHLALFEQDPETEAVLMIGEIGGPQEAEASAWIKEN- 179 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 KP++GFVAG TAP GR MGHAGA+IS A +K MK G+ +AP P GR Sbjct: 180 ---FSKPVIGFVAGLTAPKGRRMGHAGAIISATGDSAAEKAEIMKSYGLTVAPDPGSFGR 236 Query: 292 SLVELL 297 ++ ++L Sbjct: 237 TVADVL 242 >gi|300786450|ref|YP_003766741.1| succinyl-CoA synthetase alpha subunit [Amycolatopsis mediterranei U32] gi|299795964|gb|ADJ46339.1| succinyl-CoA synthetase alpha subunit [Amycolatopsis mediterranei U32] Length = 294 Score = 228 bits (581), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 130/299 (43%), Positives = 190/299 (63%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +D+N++++V G+TG G HT + +L T VVGG++P+K ++PVF Sbjct: 1 MAIFLDENSRIVVSGITGSEGAKHTRR-MLAAGTNVVGGVNPRKAGQQVELSGRSLPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VA++ T A+ V++VPP DA+IE+++A I L V I EG+PV D R+ A + Sbjct: 60 SVADSTAATGADVCVLFVPPPFVADAVIEAVDAGIGLAVVIAEGVPVHDSARLWAHAVAA 119 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPGI++P GI+P I G +G++S+SGTLTY+ + + +G S Sbjct: 120 GGRTRIIGPNCPGIISPGRSNAGIIPADITGPGRIGLVSKSGTLTYQLMHELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID +E F D T+ IV++GEIGG AEE AA+F++ KP Sbjct: 178 TCVGIGGDPIIGTTHIDAVEAFEKDPETDLIVLIGEIGGDAEERAAEFVRANV----SKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AGI + +P+ E+L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSAGTAAAKKEALEAAGIRVGRTPSETAALAREVL 292 >gi|154150269|ref|YP_001403887.1| succinyl-CoA synthetase, alpha subunit [Candidatus Methanoregula boonei 6A8] gi|153998821|gb|ABS55244.1| succinyl-CoA synthetase, alpha subunit [Methanoregula boonei 6A8] Length = 292 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 130/296 (43%), Positives = 180/296 (60%), Gaps = 16/296 (5%) Query: 6 DKNTKVLVQGLTGKAGTFH----TEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 DK T ++V G TGK G +H E A VV G+ PKK G VPV+ T Sbjct: 5 DKKTGIIVTGATGKQGDYHIGLMNEYARQVGGRGVVAGVTPKKAGQSVHG----VPVYDT 60 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V +A + A ASVI+VP AGD+I+E +A + L V ITE IPV D ++ A E Sbjct: 61 VKDALKEHDATASVIFVPAKAAGDSIMEVADAGLELAVVITEHIPVHDTMKAIAYAEMEG 120 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPNCPG+L+P K+GIMP S+F +G VG++SRSGTLTYE V + ++ G+GQST + Sbjct: 121 CRVIGPNCPGLLSPGEVKMGIMPASLFSRGHVGVISRSGTLTYEVVDELTRAGIGQSTVI 180 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDPV G F + L F D+ T+++V++GE+GG+ E E A R P+V Sbjct: 181 GIGGDPVIGQTFENALAQFAEDKETKAVVLIGEVGGNLEAEGA--------RNTDVPLVA 232 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG +APP + MGHAGA++ GG+ A KI +K+ I +A P+ I + +L Sbjct: 233 YIAGISAPPDKRMGHAGAIVEGGESDARSKIAKLKKMNIPVASRPSEIPDLIRDLF 288 >gi|134103098|ref|YP_001108759.1| succinyl-CoA synthetase subunit alpha [Saccharopolyspora erythraea NRRL 2338] gi|133915721|emb|CAM05834.1| succinyl-coa synthetase alpha chain [Saccharopolyspora erythraea NRRL 2338] Length = 288 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 131/300 (43%), Positives = 189/300 (63%), Gaps = 15/300 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++ N+KV+VQG+TG GT HT + +L T +VGG++ +K + VF Sbjct: 1 MAIFLNDNSKVIVQGITGSEGTKHTAR-MLRAGTNIVGGVNARKAGQVVEIEGKQLTVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA + T A+ SV++VPP A DA+IE+I+AEIPL V ITEGIPV D A + Sbjct: 60 SVQEAMKETGADVSVLFVPPKFAKDAVIEAIDAEIPLAVVITEGIPVHDSAYFWAHANAT 119 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R++GPNCPG+++P GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIVGPNCPGVISPGKSNAGIIPADITGPGKIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID L+ F D TE+ IGG AEE AA ++K KP Sbjct: 178 TCVGIGGDPIIGTTHIDALQAFQDDPETEA------IGGDAEERAADYIKANI----TKP 227 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ + + E++G Sbjct: 228 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAKLMREVIG 287 >gi|222874517|gb|EEF11648.1| predicted protein [Populus trichocarpa] Length = 203 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 125/202 (61%), Positives = 159/202 (78%), Gaps = 3/202 (1%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILS 157 ++CITEGIP+LDMV+VK L S+S LIGPNCPGI+TP+ CKIGIMPG I ++G +G++S Sbjct: 1 LICITEGIPILDMVQVKRALLSSNSILIGPNCPGIITPEECKIGIMPGYIHKRGHIGVIS 60 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 RSGTLTYEAV QT++ GLGQST +GIGGDP+ G F D ++LF+ D T I+M+GEIGG Sbjct: 61 RSGTLTYEAVAQTTEVGLGQSTCIGIGGDPIHGMSFTDCIKLFINDPDTHGIIMIGEIGG 120 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKE 277 S EEEAA+F+K G KP+VGF+AGKTAPPG+ MGHAGA+ SG G AE KI AMK Sbjct: 121 SEEEEAAEFIK---LSGTDKPVVGFIAGKTAPPGKRMGHAGAISSGTSGSAESKIEAMKN 177 Query: 278 AGICIAPSPARIGRSLVELLGS 299 AGI IA +PA IG++++E + + Sbjct: 178 AGIVIAETPAVIGKTMLEAMNN 199 >gi|222087987|gb|ACM41856.1| succinate-CoA ligase GDP-forming alpha subunit [Epinephelus coioides] Length = 237 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 140/221 (63%), Positives = 177/221 (80%), Gaps = 1/221 (0%) Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSRLIGPNCPGILT 134 IYVPP A AIIE+I+AEIPL+VCITEGIP DMVRVK +L +S++RLIGPNCPG++ Sbjct: 9 IYVPPPFAAAAIIEAIDAEIPLVVCITEGIPQQDMVRVKHKLLRQSATRLIGPNCPGVIN 68 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS VGIGGDP GT FI Sbjct: 69 PGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTNFI 128 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM 254 D LE+FL D TE I+++GEIGG+AEE AA++LK + KP+V F+AG TAPPGR M Sbjct: 129 DCLEVFLQDPKTEGIILIGEIGGNAEENAAEYLKQHNSGAKAKPVVSFIAGLTAPPGRRM 188 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 189 GHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTIFK 229 >gi|146322592|ref|XP_752448.2| succinyl-CoA synthetase subunit alpha [Aspergillus fumigatus Af293] gi|129557744|gb|EAL90410.2| succinyl-CoA synthetase subunit alpha, putative [Aspergillus fumigatus Af293] gi|159131203|gb|EDP56316.1| succinyl-CoA synthetase, alpha subunit, putative [Aspergillus fumigatus A1163] Length = 678 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 130/293 (44%), Positives = 192/293 (65%), Gaps = 9/293 (3%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 +T+VL QG TG+ T + ++++ + T++VGG+ P G ++ +PVF +V A+E Sbjct: 43 HTRVLFQGFTGRQATANVKESLAWG-TKIVGGVKPGV-----EGEHLGLPVFPSVRAAQE 96 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIG 126 R +AS IYVP + AI E+IEAEIPL+V + E +P+ DM+RV + L+ +S +RL+G Sbjct: 97 RAKPDASAIYVPGNQTAKAIEEAIEAEIPLVVAVAEHVPIHDMLRVHSMLQTQSKTRLVG 156 Query: 127 PNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 NCPGI++ C+IG P F G VGI+++SGTL+YE V T++ GLGQS + +GG Sbjct: 157 ANCPGIISAIGKCRIGFQPLPCFSPGKVGIVAKSGTLSYETVASTTRAGLGQSLCISMGG 216 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPIVGFVA 244 D + GT F+D L++F D TE I++VGEIGG AE +AA +++D KR KPI+ V Sbjct: 217 DVLAGTNFVDALKVFEEDPDTEGIILVGEIGGIAEIDAADWIRDYNKRTANPKPIMALVG 276 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G+ APPGR MGHAGA I+ G+ AE K A++ AG+ + P + G+ + LL Sbjct: 277 GREAPPGRVMGHAGAWITPGEPDAEAKHRALESAGVTMVDHPEKFGQGMKALL 329 >gi|303246553|ref|ZP_07332832.1| CoA-binding domain protein [Desulfovibrio fructosovorans JJ] gi|302492263|gb|EFL52138.1| CoA-binding domain protein [Desulfovibrio fructosovorans JJ] Length = 703 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 125/282 (44%), Positives = 175/282 (62%), Gaps = 9/282 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +D + VLVQG+TG+AG H ++ Y VV G+ P +G T G VPV+ TV Sbjct: 415 LTLDGASGVLVQGITGRAGRLHAKRMRAY-GANVVCGVTPFRGGTLMDG----VPVYDTV 469 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 A A + SVI+VP GA DA++E+IEA IP IVCIT+G+P DM+ V++ L + Sbjct: 470 AGAAKAHDIALSVIFVPGMGAADAVLEAIEAGIPRIVCITDGVPQKDMLAVRSALSGRDT 529 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 L+GPN PG+L P + GIMP F G V + SRSGTLTYE + S G+GQ+ A G Sbjct: 530 LLLGPNTPGMLLPGKMQAGIMPADPFIPGPVAVFSRSGTLTYEVCSRLSAAGIGQAVAAG 589 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP G F+++ E+ D +++++GE+GG AEE+ A ++ A+ G KP+ F Sbjct: 590 IGGDPFGGAGFVELCEMVRDDPQVLAVMVIGEVGGRAEEDLAAYV---AETGYPKPVAAF 646 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 VAG TAP GR +GHAGA++ GG K++ +K AGI + P Sbjct: 647 VAGMTAPAGRALGHAGALLE-HPGGIAAKVSCLKRAGIAVCP 687 >gi|121701827|ref|XP_001269178.1| CoA-ligase, putative [Aspergillus clavatus NRRL 1] gi|119397321|gb|EAW07752.1| CoA-ligase, putative [Aspergillus clavatus NRRL 1] Length = 679 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 128/293 (43%), Positives = 192/293 (65%), Gaps = 9/293 (3%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 +T VL QG TG+ T + ++++ + T++VGG+ P G ++ +PVF +V A+E Sbjct: 43 HTSVLFQGFTGRQATANVKESLAWG-TKIVGGVKPGV-----EGEHLGLPVFPSVRVAQE 96 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIG 126 R +AS IYVP + AI E+IEAEIPL+V + E +P+ DM+RV + L+ +S +RL+G Sbjct: 97 RAKPDASAIYVPGNQTAKAIEEAIEAEIPLVVAVAEHVPIHDMLRVHSILQTQSKTRLVG 156 Query: 127 PNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 NCPGI++ C+IG P F G +GI+++SGTL+YE V T++ GLGQS + +GG Sbjct: 157 ANCPGIISAIGKCRIGFQPLPCFSPGKIGIVAKSGTLSYETVASTTRAGLGQSLCISMGG 216 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG-RKKPIVGFVA 244 D + GT F+D L++F D TE I++VGEIGG+AE +AA+++ D +R KPI+G V Sbjct: 217 DVLAGTNFVDALKIFEEDPDTEGIILVGEIGGTAEMDAAEWITDYHRRTVNPKPIMGLVG 276 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G+ APPGR MGHAGA ++ G+ AE K A++ AG+ + P + G + LL Sbjct: 277 GREAPPGRVMGHAGAWVAPGEPDAETKYKALENAGVTMVNHPEKFGEEMKALL 329 >gi|306819105|ref|ZP_07452819.1| succinyl-CoA synthetase [Mobiluncus mulieris ATCC 35239] gi|304648081|gb|EFM45392.1| succinyl-CoA synthetase [Mobiluncus mulieris ATCC 35239] Length = 307 Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 138/313 (44%), Positives = 196/313 (62%), Gaps = 21/313 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGST------------- 47 MSI +++N+K++VQG+TG G HT + + Y T++V G +PKK T Sbjct: 1 MSIFLNENSKIIVQGMTGSEGRKHTTRMLAYG-TKIVAGTNPKKAGTSIDFDITPYGPLA 59 Query: 48 -YWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 GG V++PV+ TVAEAK T AN SVI+VPP A AI+E+++A + L+V ITE IP Sbjct: 60 EQLQGGTVSIPVYGTVAEAKAATGANTSVIFVPPVAAKGAILEAVDAGLDLVVVITEHIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D A + R+IGPNCPGI++P +GI PG I +G +G++S+SGTLTY+ Sbjct: 120 VQDANFALAYARERGVRVIGPNCPGIISPGKSNVGITPGDITPRGHLGLVSKSGTLTYQM 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ LG +T +GIGGDP+ GT ID L F D T+ IVM+GEIGG AEE AA + Sbjct: 180 MYELRD--LGFTTCIGIGGDPIIGTTHIDALAAFEQDPETKLIVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +K+ KP+V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IKEHV----TKPVVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVKVGKTP 293 Query: 287 ARIGRSLVELLGS 299 + R E++ + Sbjct: 294 SETARIAREIMSA 306 >gi|213618691|ref|ZP_03372517.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 186 Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 111/189 (58%), Positives = 144/189 (76%), Gaps = 4/189 (2%) Query: 109 DMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 DM+ VK +L+++ R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV Sbjct: 1 DMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVK 60 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 QT+ G GQST VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K Sbjct: 61 QTTDYGFGQSTCVGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIK 120 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 D KP+VG++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A Sbjct: 121 DHV----TKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLAD 176 Query: 289 IGRSLVELL 297 IG +L ++ Sbjct: 177 IGEALKAII 185 >gi|227875824|ref|ZP_03993950.1| succinate--CoA ligase (ADP-forming) [Mobiluncus mulieris ATCC 35243] gi|227843572|gb|EEJ53755.1| succinate--CoA ligase (ADP-forming) [Mobiluncus mulieris ATCC 35243] Length = 307 Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 138/313 (44%), Positives = 196/313 (62%), Gaps = 21/313 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGST------------- 47 MSI +++N+K++VQG+TG G HT + + Y T++V G +PKK T Sbjct: 1 MSIFLNENSKIIVQGMTGSEGRKHTTRMLAYG-TKIVAGTNPKKAGTSIDFDITPYGPLA 59 Query: 48 -YWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 GG V++PV+ TVAEAK T AN SVI+VPP A AI+E+++A + L+V ITE IP Sbjct: 60 EQLQGGTVSIPVYGTVAEAKAATGANTSVIFVPPVAAKGAILEAVDAGLDLVVVITEHIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D A + R+IGPNCPGI++P +GI PG I +G +G++S+SGTLTY+ Sbjct: 120 VQDANFALAYARERGVRVIGPNCPGIISPGKSNVGITPGDITPRGHLGLVSKSGTLTYQM 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ LG +T +GIGGDP+ GT ID L F D T+ IVM+GEIGG AEE AA + Sbjct: 180 MYELRD--LGFTTCIGIGGDPIIGTTHIDALAAFEQDPETKLIVMIGEIGGDAEERAATY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +K+ KP+V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IKEHV----TKPVVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVKVGKTP 293 Query: 287 ARIGRSLVELLGS 299 + R E++ + Sbjct: 294 SETARIAREIMSA 306 >gi|317030887|ref|XP_001392414.2| CoA-ligase [Aspergillus niger CBS 513.88] Length = 680 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 127/295 (43%), Positives = 196/295 (66%), Gaps = 9/295 (3%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 +T+VL QG TG+ T + ++++ + T++VGG+ P G ++ +PVF +V A+E Sbjct: 47 HTRVLFQGFTGRQATANVKESLEWG-TKIVGGVKPGV-----EGEHLGLPVFPSVKAAQE 100 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIG 126 R +AS IYVP + AI E+IEAEIPL+V + E +P+ D++R+ + L+ +S +RL+G Sbjct: 101 RAKPDASAIYVPGNQTAKAIEEAIEAEIPLVVAVAEHVPIHDILRIHSMLKTQSKTRLVG 160 Query: 127 PNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 NCPGI++ C+IG P F G++GI+++SGTL+YE V T++ GLGQS + +GG Sbjct: 161 ANCPGIISAIGKCRIGFQPLPCFAPGNIGIVAKSGTLSYETVASTTRAGLGQSLCISMGG 220 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPIVGFVA 244 D + GT F+D L++F D T+ I++VGEIGG+AE +AA+++KD +R KPI+G V Sbjct: 221 DVLAGTNFVDALKIFEDDPDTDGIILVGEIGGTAEIDAAEWIKDYNQRTANPKPIMGLVG 280 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G APPGR MGHAGA + G+ GA+ K A++ AG+ + P + G + LLG+ Sbjct: 281 GLHAPPGRIMGHAGAWTAIGEPGAKAKYEALERAGVVMVNHPEKFGEGMKSLLGT 335 >gi|269977459|ref|ZP_06184431.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Mobiluncus mulieris 28-1] gi|269934375|gb|EEZ90937.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Mobiluncus mulieris 28-1] Length = 307 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 138/313 (44%), Positives = 196/313 (62%), Gaps = 21/313 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGST------------- 47 MSI +++N+K++VQG+TG G HT + + Y T++V G +PKK T Sbjct: 1 MSIFLNENSKIIVQGMTGSEGRKHTTRMLAYG-TKIVAGTNPKKAGTSIDFDITPYGPLA 59 Query: 48 -YWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 GG V++PV+ TVAEAK T AN SVI+VPP A AI+E+++A + L+V ITE IP Sbjct: 60 DQLQGGTVSIPVYGTVAEAKAATGANTSVIFVPPVAAKGAILEAVDAGLDLVVVITEHIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D A + R+IGPNCPGI++P +GI PG I +G +G++S+SGTLTY+ Sbjct: 120 VQDANFALAYARERGVRVIGPNCPGIISPGKSNVGITPGDITPQGHLGLVSKSGTLTYQM 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ LG +T +GIGGDP+ GT ID L F D T+ IVM+GEIGG AEE AA + Sbjct: 180 MYELRD--LGFTTCIGIGGDPIIGTTHIDALAAFEQDPETKLIVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +K+ KP+V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IKEHV----TKPVVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVKVGKTP 293 Query: 287 ARIGRSLVELLGS 299 + R E++ + Sbjct: 294 SETARIAREIMSA 306 >gi|134076925|emb|CAK45334.1| unnamed protein product [Aspergillus niger] Length = 355 Score = 224 bits (572), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 127/301 (42%), Positives = 199/301 (66%), Gaps = 9/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +T+VL QG TG+ T + ++++ + T++VGG+ P G ++ +PVF + Sbjct: 41 NLKIGAHTRVLFQGFTGRQATANVKESLEW-GTKIVGGVKPGV-----EGEHLGLPVFPS 94 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A+ER +AS IYVP + AI E+IEAEIPL+V + E +P+ D++R+ + L+ +S Sbjct: 95 VKAAQERAKPDASAIYVPGNQTAKAIEEAIEAEIPLVVAVAEHVPIHDILRIHSMLKTQS 154 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+G NCPGI++ C+IG P F G++GI+++SGTL+YE V T++ GLGQS Sbjct: 155 KTRLVGANCPGIISAIGKCRIGFQPLPCFAPGNIGIVAKSGTLSYETVASTTRAGLGQSL 214 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKP 238 + +GGD + GT F+D L++F D T+ I++VGEIGG+AE +AA+++KD +R KP Sbjct: 215 CISMGGDVLAGTNFVDALKIFEDDPDTDGIILVGEIGGTAEIDAAEWIKDYNQRTANPKP 274 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I+G V G APPGR MGHAGA + G+ GA+ K A++ AG+ + P + G + LLG Sbjct: 275 IMGLVGGLHAPPGRIMGHAGAWTAIGEPGAKAKYEALERAGVVMVNHPEKFGEGMKSLLG 334 Query: 299 S 299 + Sbjct: 335 T 335 >gi|307700355|ref|ZP_07637395.1| succinyl-CoA synthetase, alpha subunit [Mobiluncus mulieris FB024-16] gi|307614566|gb|EFN93795.1| succinyl-CoA synthetase, alpha subunit [Mobiluncus mulieris FB024-16] Length = 307 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 138/313 (44%), Positives = 196/313 (62%), Gaps = 21/313 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGST------------- 47 MSI +++N+K++VQG+TG G HT + + Y T++V G +PKK T Sbjct: 1 MSIFLNENSKIIVQGMTGSEGRKHTTRMLAYG-TKIVAGTNPKKAGTSIDFDITPYGPLA 59 Query: 48 -YWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 GG V++PV+ TVAEAK T AN SVI+VPP A AI+E+++A + L+V ITE IP Sbjct: 60 DQLQGGAVSIPVYGTVAEAKAATGANTSVIFVPPVAAKGAILEAVDAGLDLVVVITEHIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D A + R+IGPNCPGI++P +GI PG I +G +G++S+SGTLTY+ Sbjct: 120 VQDANFALAYARERGVRVIGPNCPGIISPGKSNVGITPGDITPQGHLGLVSKSGTLTYQM 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ LG +T +GIGGDP+ GT ID L F D T+ IVM+GEIGG AEE AA + Sbjct: 180 MYELRD--LGFTTCIGIGGDPIIGTTHIDALAAFEQDPETKLIVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +K+ KP+V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IKEHV----TKPVVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVKVGKTP 293 Query: 287 ARIGRSLVELLGS 299 + R E++ + Sbjct: 294 SETARIAREIMSA 306 >gi|149202195|ref|ZP_01879168.1| succinyl-CoA synthetase, alpha subunit [Roseovarius sp. TM1035] gi|149144293|gb|EDM32324.1| succinyl-CoA synthetase, alpha subunit [Roseovarius sp. TM1035] Length = 299 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 131/283 (46%), Positives = 175/283 (61%), Gaps = 8/283 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I V+ T+++VQG+TG++GTF+T++A+ Y T VGG+ P KG G +P+F Sbjct: 1 MAIFVNSETRLIVQGMTGRSGTFYTDEAMRY-GTTCVGGVRPGKGGARHLG----LPLFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T ANAS++ VP AG A+IE+IEA + ++VC+TE +P DM RVK L + Sbjct: 56 TVREAVEATQANASLVIVPAPQAGPAMIEAIEAGVSVVVCVTERVPQHDMSRVKQALAGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPN GILTP CKIG+MP G +GI SRS +LT E + Q S+ GLGQST Sbjct: 116 DTILIGPNSQGILTPGQCKIGVMPTVNAMPGHIGIASRSASLTSEILAQCSKAGLGQSTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGD + G F+D L+ F D TE++VM+GE + KP+V Sbjct: 176 VGIGGDTLHGVGFVDCLKAFRDDPETEAVVMIGE---IGGRGEEEAAAYLEAVDYGKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 V G+ AP GR MGHAG + G G A DKI ++ AG+ IA Sbjct: 233 ALVVGRHAPRGRRMGHAGTLSVLGGGTAADKIARLRGAGVEIA 275 >gi|46139941|ref|XP_391661.1| hypothetical protein FG11485.1 [Gibberella zeae PH-1] Length = 320 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 137/282 (48%), Positives = 184/282 (65%), Gaps = 13/282 (4%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +++V++ T+V+ QG TGK T + AI Y T +VGG+ PKKG T N+++PVF T Sbjct: 42 NLMVNETTRVIYQGFTGKTATNNARDAIAYG-TNIVGGVSPKKGGTT----NLDLPVFAT 96 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A + NAS+++VP S A AI E+IEAEIPLIV I E IPV DM+RV L +S Sbjct: 97 VRGAAQSVRPNASLVHVPASFAAGAIEEAIEAEIPLIVAIVEHIPVHDMLRVHEILRTQS 156 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL GPN PGIL P C+IGI+P G VGI+SRSGT+ YEA+ T + G QS Sbjct: 157 KSRLKGPNTPGILAPGKCRIGIIPADQCAPGKVGIISRSGTMIYEAIGATMRAGQVQSLV 216 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKPI 239 +G+GGD + GT + LE+ L D ATE+I+++GEIGGSAE EAA+ LK A+ G KP+ Sbjct: 217 LGLGGDSMPGTTMKEALEVLLHDSATETIILIGEIGGSAEVEAAELLKSFRAENGMFKPV 276 Query: 240 VGFVAGKTAPPGRTMGHA------GAVISGGKGGAEDKINAM 275 + ++G+TAPPGR MGHA GA + G E+++ A+ Sbjct: 277 ISIISGRTAPPGRAMGHARVLQDSGARVLDHPGLLENELRAI 318 >gi|322699848|gb|EFY91607.1| succinate-CoA ligase (alpha subunit) [Metarhizium acridum CQMa 102] Length = 290 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 126/267 (47%), Positives = 178/267 (66%), Gaps = 6/267 (2%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 T+VVGG+ P KG ++++PVF TV EA E+ + S ++VP A AIIE+IEA Sbjct: 27 TKVVGGVSPGKGGRT----HLDLPVFGTVKEAVEQVKPHVSAVFVPAQFAAKAIIEAIEA 82 Query: 94 EIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 E+P++V + E IPV D++RV+ L +S SRL+GPNCPGI+ PD C++GIMP + +G Sbjct: 83 EVPVVVSVAEHIPVHDLLRVQEVLRTQSRSRLVGPNCPGIIAPDQCRVGIMPFRQYTRGC 142 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 VGI+S+SGTL+YEAV TS GLGQS + +GGDP+ GT +D L +F E TE I+++ Sbjct: 143 VGIVSKSGTLSYEAVGATSAAGLGQSFVIAVGGDPMPGTTIVDSLRVFFDHEETEGIIVI 202 Query: 213 GEIGGSAEEEAAQFLKDEAKRG-RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDK 271 GEIGG E AA+ ++ + KPIV VAG+TAP G+ MGHAGAV++ A +K Sbjct: 203 GEIGGEQELRAAEMIRAYRRSTPNPKPIVAMVAGQTAPRGKVMGHAGAVLTARDVTAAEK 262 Query: 272 INAMKEAGICIAPSPARIGRSLVELLG 298 A+++AG + P P +G ++ LLG Sbjct: 263 ARALEDAGAVVVPHPGVMGSTMKALLG 289 >gi|322703720|gb|EFY95325.1| CoA-ligase, putative [Metarhizium anisopliae ARSEF 23] Length = 814 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 125/288 (43%), Positives = 179/288 (62%), Gaps = 28/288 (9%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE--AKERTAANASVIYVPPSGAGDAIIESI 91 T+VVGG+ P KG ++++PVF TV E A E+ + S ++VP A AIIE+I Sbjct: 531 TKVVGGVSPGKGGQT----HLDLPVFGTVKEPQAVEQVNPHVSAVFVPAPFAARAIIEAI 586 Query: 92 EAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 EAE+P++V + E IPV D++RV+ L +S SRL+GPNCPG++ P C++GIMP + + Sbjct: 587 EAEVPVVVSVAEHIPVHDLLRVQEVLRTQSRSRLVGPNCPGVIAPGQCRVGIMPFRQYAR 646 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK------------------GTE 192 G VGI+S+SGTL+YEAV T+ GLGQS V +GGDP+ GT Sbjct: 647 GCVGIVSKSGTLSYEAVGATTAAGLGQSLVVAVGGDPMPGMSAPCRFVCIGPDAGGLGTT 706 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG--RKKPIVGFVAGKTAPP 250 +D L + E TE +V++GEIGG E AA+ ++ E +R KP+V VAG+TAP Sbjct: 707 IVDALRVLFEHEETEGVVVIGEIGGEQELRAAEMIR-EYRRSTPNPKPVVAMVAGQTAPR 765 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G+ MGHAGAV++ G A +K A+++AG + P P +G ++ LLG Sbjct: 766 GKVMGHAGAVLTPGDVTAAEKARALEDAGAVLVPHPGVMGSTMKALLG 813 >gi|327310445|ref|YP_004337342.1| succinyl-CoA synthetase subunit alpha [Thermoproteus uzoniensis 768-20] gi|326946924|gb|AEA12030.1| Succinyl-CoA synthetase, subunit alpha [Thermoproteus uzoniensis 768-20] Length = 266 Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 120/271 (44%), Positives = 179/271 (66%), Gaps = 9/271 (3%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 +L T+VVGG+ P KG G +PVF TV EA + T ANASV++VP A +A+ Sbjct: 1 MLEYGTKVVGGVTPGKGGATVAG----LPVFDTVEEAVKATGANASVVFVPAKFAAEAVY 56 Query: 89 ESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD-SCKIGIMPGSI 147 E+++A I L+V ITE IP+ + +R + + +IGPNCPGI+ P K+GIMP +I Sbjct: 57 EAVDAGIQLVVVITEHIPIHETLRFVSYAKARGVSIIGPNCPGIVAPPVKAKLGIMPNNI 116 Query: 148 FRK-GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 ++ G +G++SRSGTLTYE +Q + GLG +TAVG+GGDP+ GT+ ++ + D Sbjct: 117 YQTPGRIGVVSRSGTLTYEISYQLVRAGLGINTAVGVGGDPIVGTDLVEATLMMAKDPDI 176 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKG 266 ++IV++GE+GG AEE A+ + A KKP+VG+VAG+TAPP + MGHAGA++ G G Sbjct: 177 DAIVVIGEVGGDAEERLAKLYAEGAI---KKPLVGYVAGRTAPPEKRMGHAGAIVMLGSG 233 Query: 267 GAEDKINAMKEAGICIAPSPARIGRSLVELL 297 A K+ A++EAGI +A +P + + +++ L Sbjct: 234 DANGKVKALREAGIPVADTPMEVPQLVLKAL 264 >gi|296816593|ref|XP_002848633.1| succinyl-CoA ligase alpha-chain [Arthroderma otae CBS 113480] gi|238839086|gb|EEQ28748.1| succinyl-CoA ligase alpha-chain [Arthroderma otae CBS 113480] Length = 664 Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 127/299 (42%), Positives = 193/299 (64%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +T+VL QG TGK T + ++++ + T++VGG+ P G ++ +P+F + Sbjct: 40 NLKIGSHTRVLFQGFTGKQATANVKESLAW-GTKIVGGVKPGV-----EGEHLGLPIFPS 93 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A+E T +AS +YVP + AI E++EAEIPLIV + E +P+ DM+R+ + L+ +S Sbjct: 94 VRVAQETTRPDASAVYVPGNQTAKAIEEALEAEIPLIVAVAEHVPIHDMLRIHSMLKTQS 153 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SRL+GPNCPGI++ C+IG P F G+VGI+++SGTL YE V T++ GLGQS Sbjct: 154 KSRLVGPNCPGIISAIGKCRIGFQPLPCFAPGNVGIVAKSGTLGYETVASTTRAGLGQSL 213 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL-KDEAKRGRKKP 238 +G+GGD + GT+F+D L +F D+ T I++VGEIGG AE EAA+++ + ++ KP Sbjct: 214 CIGMGGDVLAGTDFVDALRVFEHDDDTHGIIIVGEIGGEAEMEAAEWITRYRSRNAEAKP 273 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 I+ V G APPGR MGHAGA G+ A KI A++ AG+ + P + G + LL Sbjct: 274 IMALVGGIEAPPGRVMGHAGAWTGAGEPDARTKIRALQSAGVVMVDHPEKFGEGMKTLL 332 >gi|218532111|ref|YP_002422927.1| CoA-binding protein [Methylobacterium chloromethanicum CM4] gi|218524414|gb|ACK84999.1| CoA-binding domain protein [Methylobacterium chloromethanicum CM4] Length = 301 Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 121/294 (41%), Positives = 184/294 (62%), Gaps = 13/294 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I+ ++ +VLVQG+TGK GTF T Q ++ C TQVV G++PK+ G VPV+ T Sbjct: 2 IIYRQSARVLVQGITGKQGTFWT-QKMMECGTQVVAGVNPKRAGERHLG----VPVYATA 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 A + + +V+++PP+ A +A +++I+A +V +TE IP D++ + + + Sbjct: 57 KAAMAESPFDVAVMFIPPAMAREAALDAIQAGARTVVILTEHIPARDVMAIHHAAAQHGT 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPG---SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R++GPN GI+TP +GIMPG +IF+ G+VG++SRSG+L ++ GLGQS Sbjct: 117 RIVGPNTAGIVTPGEGFVGIMPGHNPNIFQPGAVGVISRSGSLGTLICLNLTRAGLGQSA 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT D L+ D T ++V+VGEIGG+ EE AA + G KP+ Sbjct: 177 FLGIGGDPMIGTTTRDALQALDEDARTRAVVLVGEIGGAMEEAAADYAA-----GMSKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 V F+AG+ +PPG+ MGHAGA++SG G + K A++ AG+ +A +PA I R L Sbjct: 232 VSFIAGRASPPGKKMGHAGAIVSGTFGSYDGKRRALEAAGVAVADTPAEIPRLL 285 >gi|189205729|ref|XP_001939199.1| succinyl-CoA ligase subunit alpha [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187975292|gb|EDU41918.1| succinyl-CoA ligase subunit alpha [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 720 Score = 221 bits (564), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 122/294 (41%), Positives = 188/294 (63%), Gaps = 9/294 (3%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 +T+V+ QG TGK T + +++I + T VVGG+ P +G ++ +PV +V A E Sbjct: 49 HTRVIFQGFTGKQATANAKESIQWG-TNVVGGVKPNG-----SGEHLGLPVLPSVRAAME 102 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIG 126 + +A+ IYV A AI E+I+AE+PLIV + E IP+ DM+R+ + L+ +S SRLIG Sbjct: 103 QLKPDATGIYVAAHQATAAIEEAIKAEVPLIVAVAEHIPLHDMMRIHSMLQSQSKSRLIG 162 Query: 127 PNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 N PGI++ C+IG P F G +GI+++SGTL+YE V ++ GLGQS + +GG Sbjct: 163 ANAPGIISAIGRCRIGFQPLPTFSPGHIGIVAKSGTLSYETVGSLTRAGLGQSLCIAVGG 222 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK-KPIVGFVA 244 D + GT F+D L++F D+ TE+I++VGE+GG+ EEEAA ++ + +R + KPI + Sbjct: 223 DVIAGTNFVDALKVFEHDKDTEAIIVVGELGGTIEEEAADWIINYRRRVKDPKPIAAVIG 282 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G AP G+ MGHAGA + G+G AE K A++ AG+ + PA+ G + ++L Sbjct: 283 GFQAPHGKVMGHAGAWVGLGEGTAESKYKALERAGVTMVDHPAKFGGVIKDILA 336 >gi|46127041|ref|XP_388074.1| hypothetical protein FG07898.1 [Gibberella zeae PH-1] Length = 320 Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 125/281 (44%), Positives = 182/281 (64%), Gaps = 8/281 (2%) Query: 22 TFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPS 81 T + + I Y T+VVGG+ KG T ++ +P+F ++ +A E + S +++ S Sbjct: 11 TKNAQDTIAYG-TKVVGGV--TKGPKVDT--HLGLPLFGSMEKAAEELNPDVSAVFIRGS 65 Query: 82 GAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTPDSCKI 140 A DAIIE+I+ EIPLIV + E +PV DM+RV L +S SRL+GPNCPGI+ P+ C++ Sbjct: 66 LAADAIIEAIKVEIPLIVSVAEHVPVHDMLRVHEVLRTQSKSRLVGPNCPGIIAPEQCRV 125 Query: 141 GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 GIMP + +G VGI+S+SGTL+YEAV TS+ GLGQS VG+GGD + GT +D L+LF Sbjct: 126 GIMPYKQYTRGCVGIVSKSGTLSYEAVGATSRAGLGQSLVVGMGGDMIPGTSLVDALKLF 185 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK-KPIVGFVAGKTAPPGRTMGHAGA 259 + T+ ++++GEIGG AE EAA+ ++ + K KPI+ VAG+TAP R MGHAGA Sbjct: 186 FEHDETKGMLVIGEIGGEAELEAAELIERYRRNTPKPKPIIAMVAGQTAPEHRIMGHAGA 245 Query: 260 VISGG-KGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 + A++K A++ AG + P P +G + +LL S Sbjct: 246 MRRDSVDPTAQEKAAALQNAGAVVVPHPGVMGNIMEKLLAS 286 >gi|18313255|ref|NP_559922.1| succinyl-CoA synthetase alpha subunit (sucD) [Pyrobaculum aerophilum str. IM2] gi|18160775|gb|AAL64104.1| succinyl-CoA synthetase alpha subunit (sucD) [Pyrobaculum aerophilum str. IM2] Length = 293 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 131/299 (43%), Positives = 189/299 (63%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV NTKV+VQG TG+ G+FH ++ + Y T+VV G+ P KG T G VPV+ Sbjct: 1 MTVLVGPNTKVVVQGATGREGSFHLQRMLEYG-TKVVAGVTPGKGGTTVHG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA R ANASVI+VP A DA++E+++A + L V ITE IPV + +R Sbjct: 56 TVEEAVRRHGANASVIFVPARFAADALLEAVDAGVELSVVITEHIPVHETLRAVNYARAR 115 Query: 121 SSRLIGPNCPGILTPD-SCKIGIMPGSIFRK-GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPGI+ P K+GIMP +I++ G + ++SRSGTLTYE +Q + G G + Sbjct: 116 GVTVIGPNCPGIVAPPVRTKLGIMPNNIYQTPGKIAVVSRSGTLTYEISYQLVRAGFGIN 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 A+G+GGDP+ G + ++ D + +V++GE+GG AEE A+ + KKP Sbjct: 176 VAIGVGGDPIVGLDLMEATLKVAEDPEVDGVVVIGEVGGDAEERLARLYAEGVI---KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +V +VAG+TAPPG+ MGHAGA++ G G A KI A + AG+ +A +P + + L +LL Sbjct: 233 VVAYVAGRTAPPGKRMGHAGAIVMLGSGDATSKIEAFRAAGVPVAETPFEVPQLLAKLL 291 >gi|242768237|ref|XP_002341527.1| succinyl-CoA synthetase subunit alpha, putative [Talaromyces stipitatus ATCC 10500] gi|218724723|gb|EED24140.1| succinyl-CoA synthetase subunit alpha, putative [Talaromyces stipitatus ATCC 10500] Length = 678 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 126/293 (43%), Positives = 194/293 (66%), Gaps = 9/293 (3%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 +TKVL QG TG+ T + ++++ + T++VGG+ P G ++++P+F +V AKE Sbjct: 42 HTKVLYQGFTGRQATANAKESLKWG-TKIVGGVKPG-----VEGEHLDLPIFPSVRVAKE 95 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIG 126 ++ +AS IYVP + AI E+IEAEIPL+V + E +PV DM+R+ + L+ +S +RL+G Sbjct: 96 KSNPDASAIYVPGNQTAQAIEEAIEAEIPLVVAVAEHVPVHDMLRIHSILQTQSKTRLVG 155 Query: 127 PNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 NCPGI++ C+IG P F G +G++++SGTL+YE V ++ GLGQS + +GG Sbjct: 156 ANCPGIISAVGKCRIGFQPLPCFTPGRIGVVAKSGTLSYETVGSLTRAGLGQSLCISMGG 215 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK-KPIVGFVA 244 D + GT F+D L++F D T+ IV++GEIGG+AE +AA+++KD KR K KPI+ V Sbjct: 216 DVLAGTNFVDALKVFEDDPDTDGIVLIGEIGGTAEMDAAEWIKDYHKRTTKPKPIMALVG 275 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G AP GR MGHAGA ++ G+ A K A+++AG+ + P + G + ELL Sbjct: 276 GLEAPKGRVMGHAGAWVAPGEPDARAKYEALQKAGVTLVSHPEKFGPGMKELL 328 >gi|89893729|ref|YP_517216.1| hypothetical protein DSY0983 [Desulfitobacterium hafniense Y51] gi|219668104|ref|YP_002458539.1| succinyl-CoA synthetase, subunit alpha [Desulfitobacterium hafniense DCB-2] gi|89333177|dbj|BAE82772.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219538364|gb|ACL20103.1| succinyl-CoA synthetase, alpha subunit [Desulfitobacterium hafniense DCB-2] Length = 293 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 129/286 (45%), Positives = 192/286 (67%), Gaps = 9/286 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M ++++K+T V+VQG TGK G++H +A+L T+VV G+ P +G G +PV+ Sbjct: 1 MGLIINKDTHVIVQGGTGKQGSYHV-KAMLEYGTKVVAGVTPGRGGNQVGG----LPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAKER +AS+I VP A IE+I+A +PLIV +TE IPV D +++ A ++ Sbjct: 56 TVREAKERHKIDASLIMVPAPFVLSAAIEAIDAGVPLIVIVTEHIPVKDTMKINALAQEK 115 Query: 121 SSRLIGPNCPGILT-PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RL+GPN G++ + KIGIMPG ++ G +G++SRSGTL++E +GLG ST Sbjct: 116 GCRLLGPNTIGVINCREKVKIGIMPGFLYGSGRIGLISRSGTLSHETASNLMFKGLGVST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGD + GT+F+D L+ F D+ TE++VM+GEIGG+ EE+AA++L+ G KP+ Sbjct: 176 VIGIGGDQIIGTDFVDALKDFKEDQDTEAVVMLGEIGGNREEKAAEYLQ-SCDYG--KPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 F+AG+ APPG+ MGHAGA+I G G + K + +++AG+ IA S Sbjct: 233 FCFIAGRNAPPGKKMGHAGAIIQGSAGTVQSKEDKLRQAGVRIAVS 278 >gi|283853552|ref|ZP_06370791.1| CoA-binding domain protein [Desulfovibrio sp. FW1012B] gi|283571051|gb|EFC19072.1| CoA-binding domain protein [Desulfovibrio sp. FW1012B] Length = 704 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 121/280 (43%), Positives = 170/280 (60%), Gaps = 9/280 (3%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 +D+ + VLVQGLTG+AG H + ++ T V G+ P +G T G +PV+ TVA+ Sbjct: 418 LDQTSGVLVQGLTGRAGRLHARR-MVAGGTNVACGVTPFRGGTAVDG----IPVYGTVAQ 472 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 A SV++VP GA DA++E+ EA I IVCIT+G+P DM+ V+ L + L Sbjct: 473 AVRHHDIALSVLFVPAPGAADAVLEAAEAGIRRIVCITDGVPQKDMLAVRTALAGQGTLL 532 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPN PG+ P + GIMPG F G V + SRSGTL YE + + G+GQ+ GIG Sbjct: 533 LGPNTPGLCLPGRMQAGIMPGEPFSPGPVAVFSRSGTLAYEVCSRLTAAGIGQAVVAGIG 592 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 GDP G F+++ E+ DE ++++VGE+GG AEE+ A + A G KP+ FVA Sbjct: 593 GDPFGGAGFVELCEMVRHDERVRAVMVVGEVGGYAEEDLAAHV---AATGYPKPVAAFVA 649 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 G TAPPGRT+GHAGA++ GG +K+ + AGI + P Sbjct: 650 GLTAPPGRTLGHAGALLD-RPGGITEKLACLARAGIAVCP 688 >gi|169781606|ref|XP_001825266.1| CoA-ligase [Aspergillus oryzae RIB40] gi|83774008|dbj|BAE64133.1| unnamed protein product [Aspergillus oryzae] Length = 688 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 126/295 (42%), Positives = 191/295 (64%), Gaps = 9/295 (3%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 +T+VL QG TG+ T + ++++ + T++VGG+ P G ++ +PVF +V A+E Sbjct: 48 HTRVLFQGFTGRQATANVKESLAWG-TKIVGGVKPGV-----EGEHLGLPVFPSVKAAQE 101 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIG 126 + +AS IYVP + AI E+IEAEIPL+V + E +P+ D++R+ + L+ +S +RL+G Sbjct: 102 KAKPDASAIYVPGNQTAKAIEEAIEAEIPLVVAVAEHVPIHDVLRIHSMLQTQSKTRLVG 161 Query: 127 PNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 NCPGI++ C++G P F G +GI+++SGTL+YE V TS+ GLGQS + +GG Sbjct: 162 ANCPGIISAIGKCRVGFQPLPCFSPGKIGIVAKSGTLSYETVASTSRAGLGQSLCISMGG 221 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPIVGFVA 244 D + GT F+D L++F D TE I++VGEIGG+AE +AA+++KD +R KPI+G V Sbjct: 222 DVLAGTNFVDALKIFENDPDTEGIILVGEIGGTAEIDAAEWIKDYNRRTANPKPIMGLVG 281 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G AP GR MGHAGA + G+ GA K A++ AG + P + G + LL S Sbjct: 282 GLHAPAGRIMGHAGAWTAVGEPGAHAKYQALERAGAVMVNHPEKFGEGMKTLLNS 336 >gi|212542507|ref|XP_002151408.1| succinyl-CoA synthetase subunit alpha, putative [Penicillium marneffei ATCC 18224] gi|210066315|gb|EEA20408.1| succinyl-CoA synthetase subunit alpha, putative [Penicillium marneffei ATCC 18224] Length = 676 Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 128/295 (43%), Positives = 194/295 (65%), Gaps = 9/295 (3%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 +TKVL QG TG+ T + ++++ + T++VGG+ P G ++ +P+F +V AKE Sbjct: 44 HTKVLYQGFTGRQATANAKESLEWG-TKIVGGVKPG-----VEGEHLGLPIFPSVRVAKE 97 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIG 126 ++ +AS IYVP AI E+IEAEIPL+V + E +PV DM+R+ + L+ +S +RL+G Sbjct: 98 KSNPDASAIYVPGDQTAQAIEEAIEAEIPLVVAVAEHVPVHDMLRIHSILQTQSKTRLVG 157 Query: 127 PNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 NCPGI++ C+IG P F G +G++++SGTL+YEAV ++ GLGQS +G+GG Sbjct: 158 ANCPGIISAVGKCRIGFQPLPCFAPGRIGVVAKSGTLSYEAVGSLTRAGLGQSLCIGMGG 217 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPIVGFVA 244 D + GT FID +++F D T+ IV+VGEIGG+AE +AA+++KD KR KPI+ V Sbjct: 218 DVLAGTNFIDAMKIFENDLDTDGIVLVGEIGGTAEMDAAEWIKDYHKRTADPKPIMALVG 277 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G AP GR MGHAGA ++ G+ A K A+++AG+ + P + G + LLG+ Sbjct: 278 GLEAPKGRVMGHAGAWVAPGEPDARAKYVALQKAGVNLVSHPEKFGPGMKTLLGN 332 >gi|289442368|ref|ZP_06432112.1| succinyl-CoA ligase [Mycobacterium tuberculosis T46] gi|289415287|gb|EFD12527.1| succinyl-CoA ligase [Mycobacterium tuberculosis T46] Length = 244 Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 125/248 (50%), Positives = 165/248 (66%), Gaps = 14/248 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKTNV-- 238 Query: 234 GRKKPIVG 241 KP+VG Sbjct: 239 --SKPVVG 244 >gi|260199973|ref|ZP_05767464.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis T46] Length = 241 Score = 219 bits (557), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 125/248 (50%), Positives = 165/248 (66%), Gaps = 14/248 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKTNV-- 235 Query: 234 GRKKPIVG 241 KP+VG Sbjct: 236 --SKPVVG 241 >gi|302505751|ref|XP_003014582.1| hypothetical protein ARB_07144 [Arthroderma benhamiae CBS 112371] gi|291178403|gb|EFE34193.1| hypothetical protein ARB_07144 [Arthroderma benhamiae CBS 112371] Length = 292 Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 139/295 (47%), Positives = 178/295 (60%), Gaps = 48/295 (16%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GT + T VVGG +PKK G PVF + Sbjct: 35 NLRINADTKVIFQGFTGKQGTINAR-----IGTNVVGGTNPKKAGETHLGK----PVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA + T A AS I+VP C E +S Sbjct: 86 VEEAVKETGATASAIFVP--------------------C---------------HQELTS 110 Query: 122 SRLIGP--NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +LI + L+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 111 KKLIHSIVSLKEFLSMGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSL 170 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA FLK E K KP Sbjct: 171 VVGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAAFLKSENK--ANKPA 228 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 V F+AG +APPGR MGHAGA++SGGKGGA+ KI A+++AG+ + SPA +G++L+ Sbjct: 229 VSFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALQDAGVIVERSPASLGKTLL 283 >gi|315049905|ref|XP_003174327.1| succinyl-CoA ligase subunit alpha [Arthroderma gypseum CBS 118893] gi|311342294|gb|EFR01497.1| succinyl-CoA ligase subunit alpha [Arthroderma gypseum CBS 118893] Length = 687 Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 125/299 (41%), Positives = 193/299 (64%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +T+VL QG TGK T + ++++ + T++VGG+ P G ++ +P+F + Sbjct: 49 TLKIGSHTRVLFQGFTGKQATANVKESLAW-GTKIVGGVKPGV-----EGEHLGLPIFPS 102 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A E+ +AS +YVP + AI E++EAEIPLIV + E +P+ DM+R+ + L+ +S Sbjct: 103 VRVAHEKAKPDASAVYVPGNQTAKAIEEALEAEIPLIVAVAEHVPIHDMLRIHSMLKTQS 162 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SRL+GPNCPGI++ C+IG P F G++GI+++SGTL YE V T++ GLGQS Sbjct: 163 KSRLVGPNCPGIISAIGKCRIGFQPLPCFAPGNIGIVAKSGTLGYETVASTTRAGLGQSL 222 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKP 238 +G+GGD + GT+F+D L++F D+ T I++VGEIGG AE EAA++++ +R KP Sbjct: 223 CIGMGGDVLAGTDFVDALKVFEHDDDTHGIIIVGEIGGEAEMEAAEWIEGYRRRTAAAKP 282 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 I+ V G AP GR MGHAGA + G+ A KI A++ AG+ + P + G + LL Sbjct: 283 IMALVGGIEAPHGRVMGHAGAWTAAGEPNARTKIQALQSAGVVMVDHPEKFGEGMKALL 341 >gi|71006786|ref|XP_758050.1| hypothetical protein UM01903.1 [Ustilago maydis 521] gi|46097551|gb|EAK82784.1| hypothetical protein UM01903.1 [Ustilago maydis 521] Length = 357 Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 129/294 (43%), Positives = 174/294 (59%), Gaps = 16/294 (5%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 ++ V+VQG TGKA T HT Q L T VVGG+ P KG + GG PVF ++ + + Sbjct: 54 HSNVIVQGFTGKASTVHT-QISLDMGTNVVGGVAPGKGGSKHLGGR---PVFNSIKQVLD 109 Query: 68 R-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLI 125 +A+ ++VPP+ A DAIIE+I AEIPLIV + EG+PV D RV L +S SRL+ Sbjct: 110 AGIRVDATSVFVPPALAADAIIEAINAEIPLIVSVAEGVPVKDQFRVMEALHSQSKSRLL 169 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 G N PG P C++GI P G VGI+SRSGTL+YEA + T + +GQS +G+GG Sbjct: 170 GANSPGFCNPRGCRMGISPLITCAPGPVGIVSRSGTLSYEAAYAT--KPIGQSYILGLGG 227 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK--------K 237 D GT ++ LE D T++IV+ GEIGG+ EEE L D + R+ K Sbjct: 228 DFYPGTRTVEALEFLFNDPNTQAIVLAGEIGGTMEEEVYALLHDPNCKYRQAHDKDKFVK 287 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 PIVGF+AG PPG+ GHAGA+ A +K +AGI +A + A +G+ Sbjct: 288 PIVGFIAGLNTPPGQMFGHAGAIWRDNTSSAVEKKMMWNDAGIRMADAIADVGK 341 >gi|85706366|ref|ZP_01037460.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. 217] gi|85669139|gb|EAQ24006.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. 217] Length = 145 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 106/144 (73%), Positives = 125/144 (86%) Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++SRSGTLTYEAV QTS GLGQST VGIGGDP+KGTE IDVLE FLAD+ T+SI+M+GE Sbjct: 1 MVSRSGTLTYEAVKQTSDVGLGQSTCVGIGGDPIKGTEHIDVLEWFLADDETQSIIMIGE 60 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 IGGSAEEEAAQFLKDEAKRGRKKP+ GF+AG+TAPPGR MGHAGA+++GGKG AE KI A Sbjct: 61 IGGSAEEEAAQFLKDEAKRGRKKPVAGFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEA 120 Query: 275 MKEAGICIAPSPARIGRSLVELLG 298 MK AGI +A SPA +G +++ +G Sbjct: 121 MKSAGITVAESPAGLGEAVLTAIG 144 >gi|302658619|ref|XP_003021011.1| hypothetical protein TRV_04876 [Trichophyton verrucosum HKI 0517] gi|291184886|gb|EFE40393.1| hypothetical protein TRV_04876 [Trichophyton verrucosum HKI 0517] Length = 292 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 139/296 (46%), Positives = 178/296 (60%), Gaps = 50/296 (16%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYC-QTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 ++ ++ +TKV+ QG TGK GT + C T VVGG +PKK G PVF Sbjct: 35 NLRINADTKVIFQGFTGKQGTINA------CIGTNVVGGTNPKKAGETHLGK----PVFA 84 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA + T A AS I+VP E + Sbjct: 85 SVEEAVKETGATASAIFVP-----------------------------------CHQELT 109 Query: 121 SSRLIGP--NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S +LI + L+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 110 SKKLIHSIVSLKEFLSMGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQS 169 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA FLK E K KP Sbjct: 170 LVVGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAAFLKSENK--ANKP 227 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 V F+AG +APPGR MGHAGA++SGGKGGA+ KI A+++AG+ + SPA +G++L+ Sbjct: 228 AVSFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALQDAGVIVERSPASLGKTLL 283 >gi|219666261|ref|YP_002456696.1| CoA-binding protein [Desulfitobacterium hafniense DCB-2] gi|219536521|gb|ACL18260.1| CoA-binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 292 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 119/301 (39%), Positives = 191/301 (63%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN-VPVF 59 MSI++D T VL+QG+TGK G+F + A Y T +V G+ P K G +V+ +PV+ Sbjct: 1 MSIIIDHTTPVLIQGITGKEGSFWAKHAKNYG-THIVAGVTPGK-----EGQDVDGIPVY 54 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV A + AS++ VPP A A++E++++ I +IV EGIP+ +M++++ + Sbjct: 55 HTVRRAVQEHPIEASLLVVPPKAAKGAVLEALDSGIKVIVVTAEGIPLHEMMQLRKIALE 114 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + +IG N GI++ +G P +++ G VG+++RSG+LT E + + G G Sbjct: 115 KQAMVIGGNTTGIISTGKAMMGFFPYWLDRVYKPGRVGVMTRSGSLTNEVTAEIVKAGFG 174 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+ VG+GGDPV T F ++L LF D T+++VM+GEIGG+ EE+ A+ ++ +R Sbjct: 175 PSSIVGVGGDPVPLTRFAEILPLFEKDPDTDAVVMIGEIGGTMEEDVAEAIE---QRIFT 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++GF+ G+TAP G+ MGHAGA+I+ GKG EDK+ A+ +AG +A P+ IG+ L ++ Sbjct: 232 KPLIGFMGGRTAPKGQKMGHAGAIITAGKGTVEDKVEALAKAGALVADRPSMIGQLLQKV 291 Query: 297 L 297 L Sbjct: 292 L 292 >gi|284173631|ref|ZP_06387600.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus solfataricus 98/2] gi|261600985|gb|ACX90588.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus solfataricus 98/2] Length = 260 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 129/267 (48%), Positives = 173/267 (64%), Gaps = 9/267 (3%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVN-VPVFTTVAEAKERTAANASVIYVPPSGAGDAI 87 +L T++V G+ P KG G VN VPV+ TV +A + A+AS+I+VP A DAI Sbjct: 1 MLKYGTKIVAGVTPGKG-----GTQVNSVPVYDTVKDAMKEHEADASIIFVPAKYAVDAI 55 Query: 88 IESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI 147 E+++A I LIV ITE IPVLDM + SR+IGPNCPGI+ P+ +GI+P Sbjct: 56 YEAVDAGIKLIVTITEHIPVLDMAKAIKYARARGSRIIGPNCPGIIAPEESLVGILPARA 115 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 F+KG +GI+SRSGTLTYE G+GQST +GIGGDP+ GT ++V ++F D TE Sbjct: 116 FKKGKIGIVSRSGTLTYEVSELLKNHGMGQSTVIGIGGDPIIGTSILEVTKMFDQDPETE 175 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 IV++GEIGG+ EE A+ K +R KKP++ ++AG TAP + MGHAGAV+ G G Sbjct: 176 KIVVIGEIGGTMEERLAEAYK---RREIKKPVIAYIAGMTAPREKRMGHAGAVVYMGMGT 232 Query: 268 AEDKINAMKEAGICIAPSPARIGRSLV 294 E KI A KEAGI +A +P I + L+ Sbjct: 233 FESKIKAFKEAGIPVANTPYDIPKLLL 259 >gi|254169025|ref|ZP_04875863.1| CoA-ligase domain protein [Aciduliprofundum boonei T469] gi|197621995|gb|EDY34572.1| CoA-ligase domain protein [Aciduliprofundum boonei T469] Length = 253 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 120/258 (46%), Positives = 163/258 (63%), Gaps = 11/258 (4%) Query: 37 VGGIHPKKGSTYWTGGNV-NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 V G+ P KG G V NVPV+ TV E A++I VP DA E++ I Sbjct: 1 VAGVTPGKG-----GMKVHNVPVYDTVEETLVH-EPEATMITVPAPFVKDAAFEAMYNGI 54 Query: 96 PLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGI 155 ++ +TE +P+ D + + +IGPN PGI P K+GIMP IF+KG+V + Sbjct: 55 RVVYILTEKVPLHDALDIVTYARSHGHVVIGPNGPGITVPGKTKMGIMPNHIFKKGTVAV 114 Query: 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEI 215 SRSGTLTYE V + G GQST +G+GGD + G F+D+LELF DE TE+IV+VGEI Sbjct: 115 ASRSGTLTYEIVNALTLNGYGQSTVIGLGGDRITGLNFVDILELFEKDEDTEAIVLVGEI 174 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 GG+AEEEAA+++ K+ KP+V ++AG++APPG+ MGHAGA+I+ GKG AE KI A Sbjct: 175 GGTAEEEAAEYI----KKNVSKPVVAYIAGRSAPPGKRMGHAGAIITRGKGTAESKIKAF 230 Query: 276 KEAGICIAPSPARIGRSL 293 EAG+ +A P I ++L Sbjct: 231 NEAGVPVAEFPWEIPQAL 248 >gi|225569265|ref|ZP_03778290.1| hypothetical protein CLOHYLEM_05347 [Clostridium hylemonae DSM 15053] gi|225162064|gb|EEG74683.1| hypothetical protein CLOHYLEM_05347 [Clostridium hylemonae DSM 15053] Length = 306 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 118/290 (40%), Positives = 184/290 (63%), Gaps = 9/290 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D++T +L+ G+TGK G H ++ L + +++ G+ P KG G VPVF Sbjct: 1 MSILIDQDTAMLIIGITGKQGRIHCKRT-LESKARLLAGVAPGKGGQSVEG----VPVFE 55 Query: 61 TVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVA+A+ A+++ VP DA ++++ I L+ ITE +PV+D +++ + + Sbjct: 56 TVADARAVFPEIRAAMLLVPKQFVRDAAFQALDEGIRLLAVITEFVPVMDALQIVHKAKA 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++++GPN G+++P K+GIMP I+ KG +GI+SRSGTLT+E + +G G ST Sbjct: 116 LDAQVVGPNTIGVISPGKSKLGIMPDYIYGKGHIGIISRSGTLTHETASNLTFKGFGLST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGD V G + DV+E F D+ T++IV++GEIGG++EE AA +K+ KKP+ Sbjct: 176 CVGIGGDAVVGMDHADVIEYFAQDDETDAIVIIGEIGGTSEEMAAAKIKE---LNLKKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 ++AG AP + MGHAGA++SGG G KI A+++AG I P+ +I Sbjct: 233 CAYIAGMYAPENKRMGHAGAIVSGGMGTVRSKIAALEDAGAVICPTLGKI 282 >gi|332797166|ref|YP_004458666.1| succinyl-CoA synthetase subunit alpha [Acidianus hospitalis W1] gi|332694901|gb|AEE94368.1| succinyl-CoA synthetase alpha subunit [Acidianus hospitalis W1] Length = 258 Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 132/261 (50%), Positives = 171/261 (65%), Gaps = 9/261 (3%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 +L T++V G+ P KG + G VPV+ TV EA + +AS+I+VP A DAI Sbjct: 1 MLEYGTKIVAGVTPGKGGSQVYG----VPVYDTVKEAMQEHEIDASIIFVPAKFAVDAIY 56 Query: 89 ESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF 148 E+I+ IPLIV ITE IPVLDM +V EK R+IGPNCPGI+ P +GIMP F Sbjct: 57 EAIDGGIPLIVVITEHIPVLDMAKVVHYAEKKGVRIIGPNCPGIIVPGESLLGIMPSRAF 116 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 RKG +GI+SRSGTLTYE + GQST +GIGGDP+ GT+ D++++F D+ TE Sbjct: 117 RKGKIGIVSRSGTLTYEVA--EILKDFGQSTVIGIGGDPIIGTKMQDIVKMFDEDKDTEE 174 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 IV++GEIGG+ EEE A+ +K E K K IV ++AG TAP + MGHAGAV+ G G Sbjct: 175 IVIIGEIGGTMEEEVAK-MKKEGKIS--KNIVAYIAGLTAPKEKRMGHAGAVVYMGLGTY 231 Query: 269 EDKINAMKEAGICIAPSPARI 289 E K+NA KEAGI +A +P I Sbjct: 232 ESKVNAFKEAGIKVAKTPFEI 252 >gi|297521616|ref|ZP_06940002.1| succinyl-CoA synthetase subunit alpha [Escherichia coli OP50] Length = 180 Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 113/185 (61%), Positives = 136/185 (73%), Gaps = 5/185 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGG 185 VGIGG Sbjct: 176 VGIGG 180 >gi|227826684|ref|YP_002828463.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus M.14.25] gi|227458479|gb|ACP37165.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus M.14.25] gi|323473765|gb|ADX84371.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus REY15A] gi|323476415|gb|ADX81653.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus HVE10/4] Length = 260 Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 130/267 (48%), Positives = 172/267 (64%), Gaps = 9/267 (3%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 +L T++V G+ P KG T NVPV+ TV +A + A+ S+I+VP A DAI Sbjct: 1 MLKYGTKIVAGVTPGKGGTQVN----NVPVYDTVKDAMKEHEADTSIIFVPARYAVDAIY 56 Query: 89 ESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF 148 E+++A I LIV ITE IPVLDM R + +R+IGPNCPGI+ P+ +GI+P F Sbjct: 57 EAVDAGIKLIVTITEHIPVLDMARAIKYAKARGARIIGPNCPGIIAPEESLVGILPARAF 116 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 +KG +GI+SRSGTLTYE G+GQST +GIGGDP+ GT ++V ++F D TE Sbjct: 117 KKGKIGIVSRSGTLTYEVSELLKNSGMGQSTVIGIGGDPIIGTSTLEVAKMFDQDPETEK 176 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 IV++GEIGG+ EE L + KRG KKPI+ ++AG TAP + MGHAGAV+ G G Sbjct: 177 IVVIGEIGGTMEER----LAEAYKRGEIKKPIIAYIAGMTAPREKRMGHAGAVVYMGMGT 232 Query: 268 AEDKINAMKEAGICIAPSPARIGRSLV 294 E KI A KEAGI IA +P I + L+ Sbjct: 233 FESKIRAFKEAGIPIANTPYDIPKLLL 259 >gi|255937433|ref|XP_002559743.1| Pc13g13290 [Penicillium chrysogenum Wisconsin 54-1255] gi|211584363|emb|CAP92398.1| Pc13g13290 [Penicillium chrysogenum Wisconsin 54-1255] Length = 676 Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 123/301 (40%), Positives = 190/301 (63%), Gaps = 9/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +T+VL QG TG+ T + ++++ + T++VGG+ P G ++ +PVF + Sbjct: 36 NLKIGAHTRVLFQGFTGRQATANAKESLEWG-TRIVGGVKPGV-----EGEHLGLPVFPS 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A++R +AS IYVP + AI E+IEAEIPL+V + E +P+ D++R+ + L+ +S Sbjct: 90 VKAAQDRAKPDASAIYVPGNQTAKAIEEAIEAEIPLVVAVAEHVPIHDILRIHSMLQTQS 149 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+G NCPGI++ C+IG P F G VGI+++SGTL+YE V T++ GLGQS Sbjct: 150 KTRLVGANCPGIISAIGKCRIGFQPLPCFAPGDVGIVAKSGTLSYETVASTTRAGLGQSL 209 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG-RKKP 238 + +GGD + GT F+D L LF D T I++VGE+GG+AE +AA+++KD +R KP Sbjct: 210 CISMGGDVLAGTNFVDALNLFENDPDTRGIILVGEVGGTAEMDAAEWIKDYRRRTVDPKP 269 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I+ V G APPGR MGHAGA + G+ A K A++ AG + P + G + L Sbjct: 270 IMALVGGLEAPPGRIMGHAGAWAAPGEPDAHTKYQALERAGAVMVNHPEKFGEGMKTLFA 329 Query: 299 S 299 + Sbjct: 330 N 330 >gi|238618771|ref|YP_002913596.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus M.16.4] gi|238379840|gb|ACR40928.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus M.16.4] Length = 260 Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 130/267 (48%), Positives = 171/267 (64%), Gaps = 9/267 (3%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 +L T++V G+ P KG T NVPV+ TV +A + A+ S+I+VP A DAI Sbjct: 1 MLKYGTKIVAGVTPGKGGTQVN----NVPVYDTVKDAMKEHEADTSIIFVPARYAVDAIY 56 Query: 89 ESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF 148 E+++A I LIV ITE IPVLDM R +R+IGPNCPGI+ P+ +GI+P F Sbjct: 57 EAVDAGIKLIVTITEHIPVLDMARAIKYARARGARIIGPNCPGIIAPEESLVGILPARAF 116 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 +KG +GI+SRSGTLTYE G+GQST +GIGGDP+ GT ++V ++F D TE Sbjct: 117 KKGKIGIVSRSGTLTYEVSELLKNSGMGQSTVIGIGGDPIIGTSTLEVAKMFDQDPETEK 176 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 IV++GEIGG+ EE L + KRG KKPI+ ++AG TAP + MGHAGAV+ G G Sbjct: 177 IVVIGEIGGTMEER----LAEAYKRGEIKKPIIAYIAGMTAPREKRMGHAGAVVYMGMGT 232 Query: 268 AEDKINAMKEAGICIAPSPARIGRSLV 294 E KI A KEAGI IA +P I + L+ Sbjct: 233 FESKIRAFKEAGIPIANTPYDIPKLLL 259 >gi|169610772|ref|XP_001798804.1| hypothetical protein SNOG_08494 [Phaeosphaeria nodorum SN15] gi|160702150|gb|EAT83662.2| hypothetical protein SNOG_08494 [Phaeosphaeria nodorum SN15] Length = 661 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 126/299 (42%), Positives = 192/299 (64%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + K+T+V+ QG TGK T + ++++ + T VVGG+ PK +G ++ PV + Sbjct: 43 NLRIGKDTRVIFQGFTGKLATANAKESMDWG-TNVVGGVKPKG-----SGEHLGKPVLPS 96 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A E+ +A+ IYV A AI E+IEAE+PLIV + E IP+ D++R+ + L+ +S Sbjct: 97 VRAAMEQLKPDATGIYVAAHQATAAIEEAIEAEVPLIVAVAEHIPLHDIMRIHSMLQSQS 156 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SRL+G N PGI++ C+IG P F G +GI+++SGTL+YE V ++ GLGQS Sbjct: 157 KSRLVGANAPGIISAIGRCRIGFQPLPTFSPGHIGIVAKSGTLSYETVGSLTRAGLGQSL 216 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK-KP 238 + +GGD + GT F+D L++F DE TE+I++VGE+GG++EEEAA ++KD KR + KP Sbjct: 217 CIAVGGDVIAGTNFVDALKVFEKDEDTEAIILVGELGGTSEEEAAAWIKDYRKRVKNPKP 276 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 I + G A PG+ MGHAGA G+G AE K A++ G+ + PA+ G + E+L Sbjct: 277 IAAAIGGFQASPGKVMGHAGAWTGLGEGTAESKYKALENVGVTMVDHPAKFGGVMKEIL 335 >gi|259488488|tpe|CBF87961.1| TPA: succinyl-CoA synthetase subunit alpha, putative (AFU_orthologue; AFUA_1G10830) [Aspergillus nidulans FGSC A4] Length = 703 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 127/309 (41%), Positives = 194/309 (62%), Gaps = 25/309 (8%) Query: 8 NTKVLVQGLTGKA----------------GTFHTEQAILYCQTQVVGGIHPKKGSTYWTG 51 +T+VL QG TGK+ T + ++++ + T++VGG+ P G Sbjct: 48 HTRVLFQGFTGKSTHGYITISLTSIAGRQATANVKESLEWG-TKIVGGVKPGV-----EG 101 Query: 52 GNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV 111 ++ +PVF +V A+ + +AS IYVP S AI E+IEAEIPL+V + E +P+ D++ Sbjct: 102 EHLGLPVFPSVKAAQAQAKPDASAIYVPGSQTAKAIEEAIEAEIPLVVAVAEHVPLHDIL 161 Query: 112 RVKARLE-KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 RV + L+ +S +RL+G NCPGI++ C+IG P F G +GI+++SGTL+YE V Sbjct: 162 RVHSILKTQSKTRLVGANCPGIISAIGKCRIGFQPLPCFAPGKIGIVAKSGTLSYETVAS 221 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 T++ GLGQS + +GGDP+ GT F+D L++F D TE I++VGEIGG+AE +AA++++D Sbjct: 222 TTRAGLGQSLCISMGGDPLAGTNFVDALKIFENDPDTEGIILVGEIGGTAEMDAAEWIRD 281 Query: 230 EAKRGRK-KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 +R KPI+ V G+ APPGR MGHAGA + G+ G E+K A++ AG + P + Sbjct: 282 YRRRTTSPKPIMALVGGRQAPPGRIMGHAGAWTAPGEPGPEEKYRALERAGAVMVNHPEK 341 Query: 289 IGRSLVELL 297 G+ + LL Sbjct: 342 FGKGMKALL 350 >gi|15899223|ref|NP_343828.1| succinyl-CoA synthetase, alpha subunit (sucD) [Sulfolobus solfataricus P2] gi|227829322|ref|YP_002831101.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus L.S.2.15] gi|229578095|ref|YP_002836493.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus Y.G.57.14] gi|229583307|ref|YP_002841706.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus Y.N.15.51] gi|284996681|ref|YP_003418448.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus L.D.8.5] gi|13815783|gb|AAK42618.1| Succinyl-CoA synthetase, alpha subunit (sucD) [Sulfolobus solfataricus P2] gi|227455769|gb|ACP34456.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus L.S.2.15] gi|228008809|gb|ACP44571.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus Y.G.57.14] gi|228014023|gb|ACP49784.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus Y.N.15.51] gi|284444576|gb|ADB86078.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus L.D.8.5] Length = 260 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 132/268 (49%), Positives = 173/268 (64%), Gaps = 11/268 (4%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVN-VPVFTTVAEAKERTAANASVIYVPPSGAGDAI 87 +L T++V G+ P KG T VN VPV+ TV +A + A+AS+I+VP A DAI Sbjct: 1 MLKYGTKIVAGVTPGKGGT-----QVNSVPVYDTVKDAMKEHEADASIIFVPARYAVDAI 55 Query: 88 IESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI 147 E+++A I LIV ITE IPVLDM R +R+IGPNCPGI+ P+ +GI+P Sbjct: 56 YEAVDAGIKLIVTITEHIPVLDMARAIKYARARGARIIGPNCPGIIAPEESLVGILPARA 115 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 F+KG +GI+SRSGTLTYE G+GQST +GIGGDP+ GT ++V ++F D TE Sbjct: 116 FKKGKIGIVSRSGTLTYEVSELLKNSGMGQSTVIGIGGDPIIGTSTLEVAKMFDQDPETE 175 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRTMGHAGAVISGGKG 266 IV++GEIGG+ EE L + KRG KKPI+ ++AG TAP + MGHAGAV+ G G Sbjct: 176 KIVVIGEIGGTMEER----LAEAYKRGEIKKPIIAYIAGMTAPREKRMGHAGAVVYMGMG 231 Query: 267 GAEDKINAMKEAGICIAPSPARIGRSLV 294 E KI A KEAGI IA +P I + L+ Sbjct: 232 TFESKIRAFKEAGIPIANTPYDIPKLLL 259 >gi|327293844|ref|XP_003231618.1| succinyl-CoA synthetase subunit alpha [Trichophyton rubrum CBS 118892] gi|326466246|gb|EGD91699.1| succinyl-CoA synthetase subunit alpha [Trichophyton rubrum CBS 118892] Length = 689 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 128/301 (42%), Positives = 190/301 (63%), Gaps = 16/301 (5%) Query: 5 VDKNTKVLVQGLTGK---AGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 + T+VL QG TG T + ++++ + T++VGG+ P G ++ +P+F + Sbjct: 52 IGSRTRVLFQGFTGTNEAQATANVKESLAWG-TKIVGGVKPGV-----EGEHLGLPIFPS 105 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A+E+ +AS +YVP S AI E++EA IPLIV + E +P+ DM+R+ + L+ +S Sbjct: 106 VRVAQEKAKPDASAVYVPGSQTAKAIEEALEANIPLIVAVAEHVPIHDMLRIHSMLKTQS 165 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SRL+GPNCPGI++ C+IG P F G+VGI+++SGTL YE V T++ GLGQS Sbjct: 166 KSRLVGPNCPGIISAIGKCRIGFQPLQCFAPGNVGIIAKSGTLGYETVASTTRAGLGQSL 225 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK--- 236 +G+GGD + GT+F+D L++F D T I++VGEIGG AE EAA+++K RGR Sbjct: 226 CIGMGGDVLAGTDFVDALKVFEHDNDTHGIIIVGEIGGEAEMEAAEWIK--GYRGRTSEA 283 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KPI+ + G APPGR MGHAGA + G+ A KI A++ AG+ + P + G + L Sbjct: 284 KPIMALIGGIEAPPGRVMGHAGAWTASGEPDARTKIQALQSAGVAMVDHPEKFGEGMKAL 343 Query: 297 L 297 L Sbjct: 344 L 344 >gi|229583848|ref|YP_002842349.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus M.16.27] gi|228018897|gb|ACP54304.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus M.16.27] Length = 260 Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 131/268 (48%), Positives = 172/268 (64%), Gaps = 11/268 (4%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVN-VPVFTTVAEAKERTAANASVIYVPPSGAGDAI 87 +L T++V G+ P KG T VN VPV+ TV +A + A+ S+I+VP A DAI Sbjct: 1 MLKYGTKIVAGVTPGKGGT-----QVNSVPVYDTVKDAMKEHEADTSIIFVPARYAVDAI 55 Query: 88 IESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI 147 E+++A I LIV ITE IPVLDM R +R+IGPNCPGI+ P+ +GI+P Sbjct: 56 YEAVDAGIKLIVTITEHIPVLDMARAIKYARARGARIIGPNCPGIIAPEESLVGILPARA 115 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 F+KG +GI+SRSGTLTYE G+GQST +GIGGDP+ GT ++V ++F D TE Sbjct: 116 FKKGKIGIVSRSGTLTYEVSELLKNSGMGQSTVIGIGGDPIIGTSTLEVAKMFDQDPETE 175 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRTMGHAGAVISGGKG 266 IV++GEIGG+ EE L + KRG KKPI+ ++AG TAP + MGHAGAV+ G G Sbjct: 176 KIVVIGEIGGTMEER----LAEAYKRGEIKKPIIAYIAGMTAPREKRMGHAGAVVYMGMG 231 Query: 267 GAEDKINAMKEAGICIAPSPARIGRSLV 294 E KI A KEAGI IA +P I + L+ Sbjct: 232 TFESKIKAFKEAGIPIANTPYDIPKLLL 259 >gi|167044264|gb|ABZ08944.1| putative CoA-binding domain protein [uncultured marine crenarchaeote HF4000_APKG5N21] Length = 305 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 116/279 (41%), Positives = 170/279 (60%), Gaps = 7/279 (2%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V+VQG+TGK GT HT+ I Y T +V G+ P KG + +VP++ T+ EA ++T Sbjct: 23 VIVQGITGKYGTRHTKLMIEYG-TNIVAGVTPGKGGQKFEN---SVPIYETIKEAVDKTG 78 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 A S+++VP A +++EA I L+V I E +PV D +++ ++ + +IGPN P Sbjct: 79 AKISIMFVPAKFFLGAAKDALEAGIKLLVAIPEHVPVQDAMKIVELAKQKDAIVIGPNTP 138 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G++ P+ KIGIMP S F+ G++ +LS+SGTL YE S G GQ +G+GGDP+ G Sbjct: 139 GVMIPELIKIGIMPASPFKFGNIVVLSKSGTLLYEICNNLSNSGFGQCITIGVGGDPING 198 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 T D L++ E IV+VGEIGG AEE AQ + DE KP+V ++AG++AP Sbjct: 199 TRLTDALDMVKDYPDLEGIVVVGEIGGDAEEVLAQKIIDE---NFNKPVVAYIAGRSAPK 255 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + MGHAGA++ G G AE KI+ +A I +A P + Sbjct: 256 EKIMGHAGAIVMGNYGSAESKISMFSKANIPVAKRPIEV 294 >gi|284030087|ref|YP_003380018.1| succinyl-CoA synthetase subunit alpha [Kribbella flavida DSM 17836] gi|283809380|gb|ADB31219.1| succinyl-CoA synthetase, alpha subunit [Kribbella flavida DSM 17836] Length = 297 Score = 211 bits (538), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 124/300 (41%), Positives = 188/300 (62%), Gaps = 7/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + + +KV+VQG+TG G HT + +L T +VGG+ P KG ++PV+ Sbjct: 1 MAIFLTEQSKVIVQGMTGAEGQKHTSR-MLAAGTNIVGGVTPGKGGQSVDFAKRSIPVYG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 + A+A T A+ SV++VPP A+IE+++A + L+V ITEG+PV D A + + Sbjct: 60 SCADAVRSTGADVSVVFVPPRFVKGAVIEAVDAGLSLVVVITEGVPVHDTAAFFAHAQAA 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPN PG+++P GI+P I G +G++S+SGTLTY+ +++ + G +TA Sbjct: 120 GTRIIGPNSPGLISPGRANAGIIPADIAGPGRIGLVSKSGTLTYQMMYELREYGF--TTA 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID L F D T++IVM+GEIGG AEE AA F+ + KP+V Sbjct: 178 IGIGGDPIIGTTHIDALRAFQDDPETDAIVMIGEIGGDAEERAAAFIAEYV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 G+VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P+ + + L + Sbjct: 234 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAVGVKVGKTPSETAQLMRAALAQI 293 >gi|167043823|gb|ABZ08513.1| putative CoA-binding domain protein [uncultured marine crenarchaeote HF4000_APKG3D24] Length = 305 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 116/279 (41%), Positives = 169/279 (60%), Gaps = 7/279 (2%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V+VQG+TGK GT HT+ I Y T +V G+ P KG + +VP++ T+ +A ++T Sbjct: 23 VIVQGITGKYGTRHTKLMIEYG-TNIVAGVTPGKGGQKFEN---SVPIYETIKKAVDKTG 78 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 A S+++VP A +++EA I L+V I E +PV D +++ ++ + +IGPN P Sbjct: 79 AKISIMFVPAKFFLGAAKDALEAGIKLLVAIPEHVPVQDTMKIVELAKQKDAIVIGPNTP 138 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G++ P+ KIGIMP S F+ G++ +LS+SGTL YE S G GQ +GIGGDP+ G Sbjct: 139 GVMIPELIKIGIMPASPFKFGNIVVLSKSGTLLYEICNNLSNSGFGQCITIGIGGDPING 198 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 T ID L++ E IV+VGEIGG EE AQ + DE KP+V ++AG++AP Sbjct: 199 TRLIDALDMVKDYPDLEGIVVVGEIGGDGEEVLAQKIIDE---NFNKPVVAYIAGRSAPK 255 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + MGHAGA++ G G AE KI +A I +A P + Sbjct: 256 EKIMGHAGAIVMGNYGSAESKIAMFSKANIPVAKRPIEV 294 >gi|291236627|ref|XP_002738240.1| PREDICTED: succinate-CoA ligase, GDP-forming, alpha subunit-like [Saccoglossus kowalevskii] Length = 204 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 112/183 (61%), Positives = 138/183 (75%), Gaps = 6/183 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 +++ + KNTKV+ QGLTGK GTFHTEQAI Y T +VGG+ P KG G +PVF+ Sbjct: 26 VNMRLTKNTKVICQGLTGKQGTFHTEQAIEY-GTNMVGGVSPGKGGKTHLG----LPVFS 80 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EK 119 +V EAKE T A+A+V+YVPP A DAI+E+I+AEI LIV ITEGIP DMVRVK +L + Sbjct: 81 SVQEAKEATGADATVVYVPPPFAADAILEAIDAEIGLIVVITEGIPQQDMVRVKHKLIRQ 140 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + SRLIGPNCPGI+ P CK+GIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 141 NKSRLIGPNCPGIIKPGICKMGIMPGHIHQDGKIGIVSRSGTLTYEAVAQTTAVGLGQSL 200 Query: 180 AVG 182 +G Sbjct: 201 CIG 203 >gi|124485313|ref|YP_001029929.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methanocorpusculum labreanum Z] gi|124362854|gb|ABN06662.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methanocorpusculum labreanum Z] Length = 291 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 132/299 (44%), Positives = 182/299 (60%), Gaps = 13/299 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ----TQVVGGIHPKKGSTYWTGGNVNVPV 58 I KNT +LVQG TG G FH Y + T +V G+ P K G VPV Sbjct: 2 IYAGKNTGILVQGATGSQGKFHINLMNAYARQVGGTGIVAGMTPGKAGQDVFG----VPV 57 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +A + ASVI+VP G GDAI+E+ +A IP IV ITE +PV D++R A Sbjct: 58 YNSVVDAMDEHEIGASVIFVPAGGCGDAIMEAADARIPTIVTITEHVPVHDIMRAVAYAG 117 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 SR+IGPNCPG+L PD CK+GI+P ++ RKG VG++SRSGTLTY+ + + + G GQS Sbjct: 118 SRGSRVIGPNCPGMLVPDECKLGIIPANLCRKGDVGVISRSGTLTYQVISELTSAGFGQS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GIGGD V G F +V++ F AD T+++V++GE+GGS E E A+ D P Sbjct: 178 GIIGIGGDAVIGQTFSEVMDEFHADGRTKTVVLIGEVGGSLEIEGARRALDIG-----MP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 IV ++AG +AP + MGHAGA++ GG+G A KI ++ I +A P+ I + LL Sbjct: 233 IVSYIAGVSAPKEKRMGHAGAIVEGGEGDAASKIERLRALDIPVATRPSEIPDLIRRLL 291 >gi|330935373|ref|XP_003304935.1| hypothetical protein PTT_17669 [Pyrenophora teres f. teres 0-1] gi|311318125|gb|EFQ86872.1| hypothetical protein PTT_17669 [Pyrenophora teres f. teres 0-1] Length = 724 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 123/294 (41%), Positives = 187/294 (63%), Gaps = 9/294 (3%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 +T+V+ QG TGK T + +++I + T VVGG+ P +G ++ +PV +V A E Sbjct: 49 HTRVIFQGFTGKQATANAKESIEWG-TNVVGGVKPNA-----SGEHLGLPVLPSVRAAME 102 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIG 126 + +A+ IYV A AI E+IEAE+PLI+ + E IP+ DM+R+ + L+ +S SRLIG Sbjct: 103 QLKPDATGIYVAAHQATAAIEEAIEAEVPLIIAVAEHIPLHDMMRIHSMLQSQSKSRLIG 162 Query: 127 PNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 N PGI++ C+IG P F G VGI+++SGTL+YE V ++ GLGQS + +GG Sbjct: 163 ANAPGIISAIGRCRIGFQPLPTFSPGHVGIVAKSGTLSYETVGSLTRAGLGQSLCIAVGG 222 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK-KPIVGFVA 244 D + GT F+D LE+F D+ TE+I++VGE+GG+ EEEAA ++ + +R + KPI + Sbjct: 223 DVIAGTNFVDALEVFEHDKDTEAIIIVGELGGTTEEEAADWIINYRRRVKDPKPIAAVIG 282 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G AP + MGHAGA + G+G AE K A++ AG+ + PA+ G + ++L Sbjct: 283 GFQAPHNKVMGHAGAWVGLGEGTAESKFKALERAGVTMVDHPAKFGGVMKDILA 336 >gi|238498400|ref|XP_002380435.1| succinyl-CoA synthetase subunit alpha, putative [Aspergillus flavus NRRL3357] gi|220693709|gb|EED50054.1| succinyl-CoA synthetase subunit alpha, putative [Aspergillus flavus NRRL3357] Length = 655 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 126/295 (42%), Positives = 183/295 (62%), Gaps = 18/295 (6%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 +T+VL QG T L T++VGG+ P G ++ +PVF +V A+E Sbjct: 48 HTRVLFQGFTES----------LAWGTKIVGGVKPGV-----EGEHLGLPVFPSVKAAQE 92 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIG 126 + +AS IYVP + AI E+IEAEIPL+V + E +P+ D++R+ + L+ +S +RL+G Sbjct: 93 KAKPDASAIYVPGNQTAKAIEEAIEAEIPLVVAVAEHVPIHDVLRIHSMLQTQSKTRLVG 152 Query: 127 PNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 NCPGI++ C+IG P F G +GI+++SGTL+YE V TS+ GLGQS + +GG Sbjct: 153 ANCPGIISAIGKCRIGFQPLPCFSPGKIGIVAKSGTLSYETVASTSRAGLGQSLCISMGG 212 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPIVGFVA 244 D + GT F+D L++F D TE I++VGEIGG+AE +AA+++KD +R KPI+G V Sbjct: 213 DVLAGTNFVDALKIFENDPDTEGIILVGEIGGTAEIDAAEWIKDYNRRTANPKPIMGLVG 272 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G AP GR MGHAGA + G+ GA K A++ AG + P + G + LL S Sbjct: 273 GLHAPAGRIMGHAGAWTAVGEPGAHAKYQALERAGAVMVNHPEKFGEGMKTLLNS 327 >gi|312214014|emb|CBX94016.1| similar to succinyl-CoA ligase subunit alpha [Leptosphaeria maculans] Length = 700 Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 125/294 (42%), Positives = 188/294 (63%), Gaps = 9/294 (3%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 +T+V+ QG TGK T + ++++ + T VVGG+ P +G ++ PV +V A E Sbjct: 49 DTRVIFQGFTGKLATANAKESMEWG-TNVVGGVKPNG-----SGEHLGKPVLPSVRAAME 102 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIG 126 + +A+ IYV A AI E+IEAE+PLIV + E IP+ D++R+ + L+ +S SRL+G Sbjct: 103 QLKPDATGIYVAAHQAAAAIEEAIEAEVPLIVAVAEHIPLHDIMRIHSMLQSQSKSRLVG 162 Query: 127 PNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 N PGI++ C+IG P F G VGI+++SGTL+YE V ++ G+GQS + +GG Sbjct: 163 ANAPGIISAIGRCRIGFQPLPTFSPGHVGIVAKSGTLSYETVGSLTRAGVGQSLCIAVGG 222 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK-KPIVGFVA 244 D + GT FID L++F D+ T++IV++GE+GG+ EEEAA+++KD KR R KPI + Sbjct: 223 DVMAGTNFIDALKVFETDDDTQAIVLIGELGGTTEEEAAEWIKDYDKRVRNPKPIAAVIG 282 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G A PGR MGHAGA G+G AE K A++ AG+ + PA+ G + E++ Sbjct: 283 GFQAAPGRVMGHAGAWAGLGEGTAESKYKALESAGVTMVDHPAKFGGVMKEIMA 336 >gi|329765515|ref|ZP_08257091.1| Succinyl-CoA synthetase-like protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137953|gb|EGG42213.1| Succinyl-CoA synthetase-like protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 305 Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 118/283 (41%), Positives = 165/283 (58%), Gaps = 7/283 (2%) Query: 7 KNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 K V+VQG+TG G+ H + I Y T +V G+ P KG + VP++ TV EA Sbjct: 18 KKKGVIVQGITGAYGSLHAKNMITYG-TNIVAGVTPGKGGQKFED---KVPIYNTVKEAV 73 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + T A S+++VP A E++EA I L+V I E +PV D + V K + +IG Sbjct: 74 DATGAKISIVFVPAKFFLGAAKEALEAGIKLLVAIPEHVPVRDTMEVLDLATKKGAVIIG 133 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN PGI+ P+ KIGIMP F+ G + +LS+SGTL YE + G GQS +GIGGD Sbjct: 134 PNTPGIMIPELIKIGIMPAMPFKAGKIAVLSKSGTLLYEISDALTNAGFGQSITIGIGGD 193 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P+ GT ID E+ E +V+VGEIGG +EE AQ + D G KKP V ++AG+ Sbjct: 194 PINGTRMIDAFEMVKDIPDLEGLVVVGEIGGDSEEILAQRIID---IGFKKPTVAYIAGR 250 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 AP + MGHAGA++ G G AE K++ +A I +A P+++ Sbjct: 251 AAPKEKRMGHAGAIVMGTYGSAESKVSMFNKANIPVAKRPSQV 293 >gi|312116114|ref|YP_004013710.1| CoA-binding protein [Rhodomicrobium vannielii ATCC 17100] gi|311221243|gb|ADP72611.1| CoA-binding domain protein [Rhodomicrobium vannielii ATCC 17100] Length = 294 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 122/291 (41%), Positives = 191/291 (65%), Gaps = 15/291 (5%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFTT 61 +++ + KVL+QGLTGK GTF E+ ++ C TQV GG++PK+ G T+ + VPVF + Sbjct: 1 MILRREHKVLIQGLTGKQGTFWAEK-MMACGTQVRGGVNPKRAGETH-----LGVPVFAS 54 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 EA + SV+++PP+ A DA +++IEA + ++ +TE IP+ D++ + A +K + Sbjct: 55 ACEAMRSGHFDISVMFIPPAAAKDAALDAIEAGVKQLIVLTEHIPLQDVLMMHAAAKKRN 114 Query: 122 SRLIGPNCPGILTPDSCKIGIMPG---SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R++GPN G++TP GIMPG IF+ G VG++SRSG+L +++GLGQS Sbjct: 115 TRIVGPNTAGLVTPGEAFAGIMPGHNAQIFQPGFVGVISRSGSLGTLICLNLTRDGLGQS 174 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GIGGDPV GT + L D+ TE++V+VGEIGG+ EE AA + + KP Sbjct: 175 AFLGIGGDPVIGTTTCEALVALDEDKKTEAVVLVGEIGGAMEEAAAAYAATMS-----KP 229 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 ++ F+AG++APPG+TMGHAGA++SGG+G + K A+++AG+ + P + Sbjct: 230 VIAFIAGRSAPPGKTMGHAGAIVSGGRGTYQSKREALEKAGVKVVDMPYEV 280 >gi|325264239|ref|ZP_08130971.1| succinate-CoA ligase, alpha subunit [Clostridium sp. D5] gi|324030723|gb|EGB92006.1| succinate-CoA ligase, alpha subunit [Clostridium sp. D5] Length = 305 Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 124/291 (42%), Positives = 191/291 (65%), Gaps = 11/291 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN-VPVF 59 MSIL+ K+T++L+ G+TGK G H Q L T+++ G+ P K G VN VPVF Sbjct: 1 MSILIHKDTEMLMIGITGKQGRIHC-QRTLESGTKLLAGVAPGKA-----GEEVNGVPVF 54 Query: 60 TTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 TVA+A+ + ++++ VP DA I+++ + I L+V +TE +PV+D + + + + Sbjct: 55 NTVADARAQFPGIESALLIVPRQFVHDAAIDALHSGIKLLVIVTEFVPVMDTLHIVSEAK 114 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 K +R++GPN G+++P KIGIMP I+ KG +GI+SRSGTLT+E + +G G S Sbjct: 115 KLGARIVGPNTIGVISPGQSKIGIMPDYIYGKGHIGIISRSGTLTHETASNLTFKGYGLS 174 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G DV+ELF DE T++IV++GEIGG++EE AA +K+ G KKP Sbjct: 175 TCIGIGGDPIIGMNHADVIELFAEDEDTDAIVIIGEIGGTSEEMAAAKIKE---LGLKKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + ++AG AP + MGHAGA++SGG G + K+ A+++AG+ + P+ +I Sbjct: 232 VYAYIAGMYAPENKKMGHAGAIVSGGMGTVKSKVAALEDAGVTVCPTLGKI 282 >gi|15921203|ref|NP_376872.1| succinyl-CoA synthetase subunit alpha [Sulfolobus tokodaii str. 7] gi|15621988|dbj|BAB65981.1| 259aa long hypothetical succinyl-CoA synthetase alpha subunit [Sulfolobus tokodaii str. 7] Length = 259 Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 127/265 (47%), Positives = 177/265 (66%), Gaps = 8/265 (3%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 +L T++V G+ P KG T G VPV+ T+ +A + +AS+++VP A DAI Sbjct: 1 MLTYGTKIVAGVSPGKGGTTVHG----VPVYDTIEDALKEHEIDASIVFVPAKYAPDAIY 56 Query: 89 ESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF 148 E+I+ I L+V ITE IPVLDM+++ + +R+IGPNCPG++ P+ IGI+P F Sbjct: 57 EAIDGGIKLVVVITEHIPVLDMLKIVKYAKTKGTRIIGPNCPGLIVPEESLIGILPPRPF 116 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 +KG VGI+SRSGTLTYE V + ++ GQST +GIGGDP+ GT+ I+++++F D TES Sbjct: 117 KKGKVGIVSRSGTLTYE-VAEMVKKDYGQSTVIGIGGDPIIGTDMIEIVKMFEEDPETES 175 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 IVM+GEIGG+ EE A+ +K E K KK IV ++AG TAP + MGHAGAV+ G G Sbjct: 176 IVMIGEIGGTMEERVAK-MKAEGK--IKKKIVAYIAGMTAPREKRMGHAGAVVYMGMGTF 232 Query: 269 EDKINAMKEAGICIAPSPARIGRSL 293 E KI A+ EAGI +A +P I + L Sbjct: 233 ESKIKALTEAGIPVAKTPYEIPKLL 257 >gi|254559360|ref|YP_003066455.1| succinyl-CoA synthetase subunit alpha [Methylobacterium extorquens DM4] gi|254266638|emb|CAX22411.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium extorquens DM4] Length = 301 Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 121/290 (41%), Positives = 183/290 (63%), Gaps = 13/290 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I+ ++ +VLVQG+TGK GTF TE+ ++ C TQVV G++PK+ G VPV+ T Sbjct: 2 IIYRQSARVLVQGITGKQGTFWTEK-MMECGTQVVAGVNPKRAGERHLG----VPVYATA 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 A + +A+V+++PP+ A +A ++I A +V +TE IP LD++ + + + Sbjct: 57 KAAMTESPFDAAVMFIPPAMAREAAFDAIHAGAKTVVILTEHIPALDVIAIHHAAAQHGT 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPG---SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPN GI+TP +GIMPG +IF+ G +G++SRSG+L ++ GLGQS Sbjct: 117 RIIGPNTAGIVTPGEGFVGIMPGHNPNIFQPGEIGVISRSGSLGTLICLNLTRAGLGQSA 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT D L+ D T ++V+VGEIGG+ EE AA++ + KP+ Sbjct: 177 FLGIGGDPMIGTTTRDALQALDQDPRTRAVVLVGEIGGAMEEAAAEYAAGMS-----KPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 V F+AG+ +PPG+ MGHAGA++SG G E K A++ AG+ +A +PA I Sbjct: 232 VSFIAGRASPPGKKMGHAGAIVSGSMGSYEGKRRALEAAGVAVADTPAEI 281 >gi|325264213|ref|ZP_08130945.1| succinyl-CoA synthetase, alpha subunit [Clostridium sp. D5] gi|324030697|gb|EGB91980.1| succinyl-CoA synthetase, alpha subunit [Clostridium sp. D5] Length = 294 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 114/279 (40%), Positives = 176/279 (63%), Gaps = 9/279 (3%) Query: 12 LVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT-A 70 ++ G+TGK G H + L +++ G+ P KG G VPVF TVA+AK + Sbjct: 1 MIIGITGKQGRTHCMRT-LESGAKLLAGVAPGKGGQKVEG----VPVFETVADAKIKFPG 55 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 ++++ VPP DA + ++ I L+V ITE +PVLD++ + + ++++GPN Sbjct: 56 IESAMLLVPPKFVKDAAMRALHEGIKLLVIITEFVPVLDVLEIVNEAKILGAKVVGPNTI 115 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 GI++P K+GIMP I+ KG +GI+SRSGTLT+E + +G G ST VGIGGD + G Sbjct: 116 GIISPGKSKLGIMPDYIYGKGHIGIISRSGTLTHETASNLTFKGFGLSTCVGIGGDSIIG 175 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 D+LELF D+ T++IV++GEIGG++EE AA +K+ G KKP+ ++AG AP Sbjct: 176 MNHADILELFAKDDETDAIVIIGEIGGTSEEMAAAKIKE---LGMKKPVYAYIAGMYAPE 232 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + MGHAGA++SGG G + K+ A+++AG+ + P+ +I Sbjct: 233 NKRMGHAGAIVSGGMGTVKSKVAALEDAGVTVCPTLGKI 271 >gi|302558886|ref|ZP_07311228.1| succinyl-CoA synthetase, alpha subunit [Streptomyces griseoflavus Tu4000] gi|302476504|gb|EFL39597.1| succinyl-CoA synthetase, alpha subunit [Streptomyces griseoflavus Tu4000] Length = 219 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 113/223 (50%), Positives = 157/223 (70%), Gaps = 7/223 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVF 59 M+I ++K++KV+VQG+TG G HT + +L T +VGG++P+K G++ GN +PVF Sbjct: 1 MAIFLNKDSKVIVQGMTGATGMKHT-KLMLADGTNIVGGVNPRKAGTSVDIDGN-EIPVF 58 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR-LE 118 TVAEA E+T AN SV++VPP+ A A++E+I+AEIPL V ITEGI V D A +E Sbjct: 59 GTVAEAMEKTGANVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFYAYAVE 118 Query: 119 K-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 K +R+IGPNCPG+++P GI+PG I + G +G++S+SGTLTY+ +++ +G Sbjct: 119 KGDKTRIIGPNCPGLISPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGF 176 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 S+AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AE Sbjct: 177 SSAVGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAE 219 >gi|171185916|ref|YP_001794835.1| succinyl-CoA synthetase, alpha subunit [Thermoproteus neutrophilus V24Sta] gi|170935128|gb|ACB40389.1| succinyl-CoA synthetase, alpha subunit [Thermoproteus neutrophilus V24Sta] Length = 292 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 131/299 (43%), Positives = 187/299 (62%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV T+V+VQG TG+ G+FH ++ + Y T++V G+ P KG G VPV+ Sbjct: 1 MTVLVGPTTRVVVQGATGREGSFHLQRMMEYG-TKIVAGVTPGKGGASVHG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA R ANASVI+VP A +A++E+++A + L+V ITE IPV D +R Sbjct: 56 TVEEAVRRHGANASVIFVPARAAAEAVLEAVDAGVELVVVITEHIPVHDALRAINYARSR 115 Query: 121 SSRLIGPNCPGILTPD-SCKIGIMPGSIFRK-GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPG++ P K+GIMP SI++ G V ++SRSGTLTYE +Q + G G + Sbjct: 116 GVTVIGPNCPGVVAPPVRTKLGIMPNSIYQTPGKVAVVSRSGTLTYEISYQLVRAGFGIN 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 AVG+GGDPV G + ++ D IV++GE+GG AEE A+ + A KP Sbjct: 176 IAVGVGGDPVVGLDLMEATLKVAEDPDVRGIVVIGEVGGDAEERLAKLYAEGAI---NKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +V ++AG+TAPPG+ MGHAGA++ G G A KI A K AG+ +A +P + + L +LL Sbjct: 233 VVAYIAGRTAPPGKRMGHAGAIVMMGSGDARGKIEAFKAAGVPVAETPFEVPKLLSKLL 291 >gi|326904828|gb|EGE51761.1| LOW QUALITY PROTEIN: succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis W-148] Length = 226 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 115/226 (50%), Positives = 153/226 (67%), Gaps = 10/226 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 -RLEK-SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 LE +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSA 219 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG A Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDA 226 >gi|289704563|ref|ZP_06500997.1| succinyl-CoA synthetase subunit alpha [Micrococcus luteus SK58] gi|289558751|gb|EFD52008.1| succinyl-CoA synthetase subunit alpha [Micrococcus luteus SK58] Length = 256 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 120/239 (50%), Positives = 160/239 (66%), Gaps = 13/239 (5%) Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE------- 118 E+T A+ SV +VPP+ A DA IE+IEAEIPL+V ITEGIPV D A + Sbjct: 20 HEKTGADVSVAFVPPAFAKDAAIEAIEAEIPLLVVITEGIPVQDSAEFFALSQSKTGEDG 79 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 K +R+IGPNCPGI+TP GI P +I G +G++S+SGTLTY+ +++ G S Sbjct: 80 KPKTRIIGPNCPGIITPGEALAGITPATITGTGPIGLVSKSGTLTYQMMYELRD--FGFS 137 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDPV GT ID LE F AD T++IVM+GEIGG AEE AA+F+K KP Sbjct: 138 TAIGIGGDPVIGTTHIDALEAFEADPDTQAIVMIGEIGGDAEERAAEFIKANV----TKP 193 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + + E+L Sbjct: 194 VVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAQLMREIL 252 >gi|146304344|ref|YP_001191660.1| succinyl-CoA synthetase subunit alpha [Metallosphaera sedula DSM 5348] gi|145702594|gb|ABP95736.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Metallosphaera sedula DSM 5348] Length = 263 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 126/269 (46%), Positives = 172/269 (63%), Gaps = 9/269 (3%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 +L T++V G+ P KG T G VPV+ TV EA + +AS+I+VP A +A+ Sbjct: 2 MLKYGTKIVAGVTPGKGGTQVNG----VPVYDTVKEAVKEHEIDASIIFVPARFASEAVY 57 Query: 89 ESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF 148 E+++A I L+ ITE IPV+D+ + +R+IGPNCPG++ P +GI+P F Sbjct: 58 EAVDAGIKLVTVITEHIPVVDVAKFVRYARARGTRIIGPNCPGLIVPGESLLGILPAKYF 117 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 RKG+VGI+SRSGTLTYE LGQST +GIGGDP+ GT+ +V++ F D TE+ Sbjct: 118 RKGTVGIVSRSGTLTYEVSHLVGD--LGQSTVIGIGGDPIIGTQLQEVVQEFDKDNNTEA 175 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 IV++GEIGG+ EE AQ LK E K KKPIVG++AG TAP + MGHAGAV+ G G Sbjct: 176 IVIIGEIGGTMEERVAQ-LKKEGK--IKKPIVGYIAGLTAPREKRMGHAGAVVYMGMGTF 232 Query: 269 EDKINAMKEAGICIAPSPARIGRSLVELL 297 E KI A K+A I +A +P I L +++ Sbjct: 233 ESKIEAFKKADIPVAKTPYEIRDILTKIV 261 >gi|88601415|ref|YP_501593.1| succinyl-CoA synthetase, subunit alpha [Methanospirillum hungatei JF-1] gi|88186877|gb|ABD39874.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methanospirillum hungatei JF-1] Length = 288 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 123/285 (43%), Positives = 180/285 (63%), Gaps = 16/285 (5%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQT----QVVGGIHPKKGSTYWTGGNVNVPV 58 I DK T V+V G TG G+FH ++ Y ++ VV G+ P KG G VPV Sbjct: 2 IYADKKTGVIVCGATGNQGSFHIDRMNQYARSIGGRGVVAGVTPGKGGQEVHG----VPV 57 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + ++ EA E A A+V++VP S AGD+I+E+ +A + L+V ITE IPV D++ + Sbjct: 58 YNSILEAAEAQNATAAVLFVPGSAAGDSIMEAADAGLDLVVTITEHIPVHDVMHAVTYAQ 117 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPG+ +P +GIMP + +G VG++SRSGTLTYE V + ++ G+GQS Sbjct: 118 MRDCTVIGPNCPGLFSPGEISMGIMPAHLATRGPVGVISRSGTLTYEVVHELTRAGIGQS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + +GIGGDP+ G F DVLE F D T+++V++GE+GG+ EEE A R + P Sbjct: 178 SIIGIGGDPIIGQTFADVLERFAEDPLTKAVVILGELGGNLEEEGA--------RSAELP 229 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 +V F+AG TAP + MGHAGA+++GG+G A KI +++ G+ +A Sbjct: 230 VVAFIAGTTAPAEKRMGHAGAIVTGGEGDANAKIARLRDLGVPVA 274 >gi|167042622|gb|ABZ07344.1| putative CoA-binding domain protein [uncultured marine crenarchaeote HF4000_ANIW133K13] Length = 282 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 111/279 (39%), Positives = 165/279 (59%), Gaps = 8/279 (2%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 ++VQG+TGK GT HT+ + Y T + G+ P KG + +VP++ T+ EA + Sbjct: 1 MIVQGITGKFGTVHTKLMLEYG-TNIAAGVTPGKGGQKFQ----DVPIYETMKEAIAASK 55 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 A S+++VP +A E+ EA I L+V I E +PV D++ +++ + +IGPN P Sbjct: 56 AKISIVFVPAKFFLEAAKEAFEAGIKLLVAIPEYVPVRDVMLAIEIAKQNDAMMIGPNTP 115 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G++ P KIGIMP S F +G + +LS+SGTL YE + G GQ+ +GIGGD + G Sbjct: 116 GVIIPGLIKIGIMPASPFMQGKIAVLSKSGTLLYEISNNLTTSGFGQNVTLGIGGDSING 175 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 T +D ++ E +V+VGEIGG AEE A+ + D G KKP+VG++AG+ AP Sbjct: 176 TTMVDAFDMIKDQPELEGVVIVGEIGGQAEETLAEHIID---IGFKKPVVGYIAGRKAPK 232 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + MGHAGA++ G G AE KI +A I +A P + Sbjct: 233 EKRMGHAGAIVMGNYGSAESKIAMFAKANIPVAKRPTEV 271 >gi|209885855|ref|YP_002289712.1| succinyl-CoA synthase, alpha subunit [Oligotropha carboxidovorans OM5] gi|209874051|gb|ACI93847.1| succinyl-CoA synthase, alpha subunit [Oligotropha carboxidovorans OM5] Length = 296 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 132/291 (45%), Positives = 191/291 (65%), Gaps = 15/291 (5%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFTT 61 ++ + KVLVQG+TGK GTF +E+ + T V G++PK+ G TY + VP++ + Sbjct: 1 MIYRRGQKVLVQGMTGKQGTFWSER-MREMGTDVAAGVNPKRAGETY-----LGVPIYGS 54 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 EA + T + SVI++PPS A AII++I+A I IV +TE IP D++ + ARL S Sbjct: 55 AVEATKETPCDVSVIFIPPSMAKAAIIDAIDAGIGTIVTLTEHIPAHDVLEIFARLRLSK 114 Query: 122 SRLIGPNCPGILTPDSCKIGIMPG---SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 SR+IGPN GI+TP +GIMPG +IF+ G VG++SRSG+L ++ LGQS Sbjct: 115 SRIIGPNTAGIVTPGEGFVGIMPGHNPNIFKPGRVGVISRSGSLGTLMCLNLTRADLGQS 174 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GIGGDP+ GT D L D T+++V+VGEIGG+ EEEAA+ R KKP Sbjct: 175 AFIGIGGDPIIGTTTRDALIELDRDAKTDAVVLVGEIGGAMEEEAAE-----YARTMKKP 229 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 IV F+AG+++PP + MGHAGA+++GG+GG + K A+++AGI +A +PA + Sbjct: 230 IVSFIAGRSSPPDKKMGHAGAIVTGGRGGYDSKRAALEKAGIRVANTPAEV 280 >gi|221041494|dbj|BAH12424.1| unnamed protein product [Homo sapiens] Length = 248 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 116/183 (63%), Positives = 137/183 (74%), Gaps = 6/183 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 224 Query: 182 GIG 184 G G Sbjct: 225 GEG 227 >gi|319653327|ref|ZP_08007428.1| hypothetical protein HMPREF1013_04045 [Bacillus sp. 2_A_57_CT2] gi|317394976|gb|EFV75713.1| hypothetical protein HMPREF1013_04045 [Bacillus sp. 2_A_57_CT2] Length = 305 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 128/307 (41%), Positives = 180/307 (58%), Gaps = 16/307 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M IL+++NT++ VQG+TG+ + + Y T++ GI P KG Y G VPV+ Sbjct: 1 MPILINQNTRLAVQGITGREASMIVSHTLAYG-TRIYAGITPGKGGQYVQG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA ++ NA++I VPP+ A DA++E+I I LIV TE IP D V++ K Sbjct: 56 TVAEAVKKHGINATLIVVPPAFALDAVLEAISNGIKLIVVTTENIPQHDAVKLLYAARKE 115 Query: 121 SSRLIGPNCPGILTP-DSCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 + +IGPN G++ P D K+G + P F G+VG++SRSG +T E + + G Sbjct: 116 NVTIIGPNTVGMINPKDRIKMGSIGGDRPERCFIPGNVGVISRSGGMTAETSWMVKRAGF 175 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G +T++GIGGD + GT D+L LF DE TE++V E G S EEEAAQ LK+ G Sbjct: 176 GVTTSIGIGGDSLIGTTIRDLLVLFEKDEETEAVVTFSEPGTSFEEEAAQLLKE---GGF 232 Query: 236 KKPIVGFVAGK---TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KP++ FVAGK + P G GHAGA+ISG G K+ A+KE+G + I Sbjct: 233 TKPLISFVAGKFTESMPEGTVFGHAGAMISGNTGRPSLKMKALKESGAHVVEKYDDIISV 292 Query: 293 LVELLGS 299 L ++LGS Sbjct: 293 LQKVLGS 299 >gi|161528632|ref|YP_001582458.1| CoA-binding domain-containing protein [Nitrosopumilus maritimus SCM1] gi|160339933|gb|ABX13020.1| CoA-binding domain protein [Nitrosopumilus maritimus SCM1] Length = 305 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 162/279 (58%), Gaps = 7/279 (2%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V+VQG+TG G+ H I Y T VV G+ P KG + + VP++ ++ EA + T Sbjct: 22 VIVQGITGAYGSLHARNMIAYG-TNVVAGVTPGKGGQKF---DDKVPIYNSMQEAVDATN 77 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 A S+++VP A +++EA I L+V I E +PV D + ++ + +IGPN P Sbjct: 78 AKISIVFVPAKFFLSAAKDALEAGIKLLVAIPEHVPVRDTMETLELAKQKGAVVIGPNTP 137 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 GI+ P+ KIGIMP F+ G + +LS+SGTL YE + G GQS +GIGGDPV G Sbjct: 138 GIMIPELIKIGIMPPMPFKAGKIAVLSKSGTLLYEISDALTNAGFGQSITIGIGGDPVNG 197 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 T ID ++ E +V+VGEIGG +EE AQ + D G KP V ++AG+ AP Sbjct: 198 TRLIDAFDMVKDIPDLEGMVVVGEIGGDSEEMLAQRIIDS---GFNKPTVAYIAGRAAPK 254 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + MGHAGA++ G G AE K++ +A I +A PA + Sbjct: 255 EKRMGHAGAIVMGTYGSAESKVSMFNKANIPVAKRPAEV 293 >gi|269986530|gb|EEZ92814.1| ATP-citrate lyase/succinyl-CoA ligase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 213 Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 103/214 (48%), Positives = 146/214 (68%), Gaps = 4/214 (1%) Query: 85 DAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP 144 D++IE+I+A I LI ITE +P DM+++ + ++IGPNCPG+ P K+GI+P Sbjct: 4 DSVIEAIDAGIKLITIITEHVPFQDMLKINEYAKLKDVKIIGPNCPGLAAPGIGKLGIIP 63 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 +I +KG VG++SRSGTLTYE V ++ GLG+ST +GIGGD V G FIDVL+LF D+ Sbjct: 64 NTILKKGVVGVISRSGTLTYEIVNVITETGLGESTVLGIGGDKVPGLNFIDVLKLFNEDK 123 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 T IV+VGEIGG+ EE+AA F+ ++ KKP+ F+ G APPG+ MGHAGA+ISG Sbjct: 124 QTRGIVIVGEIGGNEEEKAADFI----RKNVKKPVFAFIDGVYAPPGKRMGHAGAIISGK 179 Query: 265 KGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G A+ K+ A K+A + +A + + +V+ LG Sbjct: 180 TGTAKSKLAAFKKANVPVAKTFDELSSLMVKKLG 213 >gi|261203545|ref|XP_002628986.1| succinyl-CoA ligase alpha-chain [Ajellomyces dermatitidis SLH14081] gi|239586771|gb|EEQ69414.1| succinyl-CoA ligase alpha-chain [Ajellomyces dermatitidis SLH14081] gi|239608195|gb|EEQ85182.1| succinyl-CoA ligase alpha-chain [Ajellomyces dermatitidis ER-3] gi|327349379|gb|EGE78236.1| succinyl-CoA ligase alpha-chain [Ajellomyces dermatitidis ATCC 18188] Length = 687 Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 127/296 (42%), Positives = 190/296 (64%), Gaps = 9/296 (3%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 +T+VL QG TG+ T + ++++ + T++VGG+ P G ++ +P+F +V A+E Sbjct: 52 HTRVLFQGFTGRQATANVKESLTWG-TKIVGGVKPG-----VEGEHLGLPIFPSVQVAQE 105 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIG 126 +T +A+ IYVP AI E+I AEIPLIV + E +PV DM+RV A L+ +S SRL+G Sbjct: 106 KTKPDATAIYVPGPQTAQAIEEAIAAEIPLIVAVAEHVPVHDMLRVHAMLQTQSKSRLVG 165 Query: 127 PNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 NCPGI++ C+IG P F G++GI+++SGTL YE V T++ GLGQS + +GG Sbjct: 166 ANCPGIISAIGKCRIGFQPLPCFSPGNIGIVAKSGTLGYETVASTTRAGLGQSLCISVGG 225 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG-RKKPIVGFVA 244 D + GT+F+D L++ DE T I++VGEIGG+AE +AA+++ D +R KPI+ V Sbjct: 226 DVLAGTDFVDALKILEHDEDTHGIIIVGEIGGAAEIDAAEWILDYRRRTVDPKPIMAVVG 285 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 G APPGR MGHAGA + G + KI A+++AG + P G + LLG++ Sbjct: 286 GIHAPPGRVMGHAGAWAAPGDPDPQTKIRALRDAGAVMVNHPENFGEGMKMLLGNM 341 >gi|270667856|ref|ZP_06222459.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae HK1212] gi|270316804|gb|EFA28545.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae HK1212] Length = 152 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 99/153 (64%), Positives = 118/153 (77%), Gaps = 4/153 (2%) Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + + PNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 4 NRRKFTRPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQST 63 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+ Sbjct: 64 CVGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDHV----TKPV 119 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 V ++AG TAP G+ MGHAGA+ISGGKG A +KI Sbjct: 120 VAYIAGITAPKGKRMGHAGAIISGGKGTAVEKI 152 >gi|297192593|ref|ZP_06909991.1| succinyl-CoA synthetase subunit alpha [Streptomyces pristinaespiralis ATCC 25486] gi|297151418|gb|EFH31147.1| succinyl-CoA synthetase subunit alpha [Streptomyces pristinaespiralis ATCC 25486] Length = 217 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 107/220 (48%), Positives = 151/220 (68%), Gaps = 5/220 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++K++KV+VQG+TG G HT + +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLNKDSKVIVQGMTGATGMKHT-KLMLGDGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD--MVRVKARLE 118 +VAEA E+T A+ SV++VPP+ A A++E+I+AEIPL V ITEGI V D A+ + Sbjct: 60 SVAEAMEKTGADVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAYAKSK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGS 218 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGD 217 >gi|302658494|ref|XP_003020950.1| succinyl-CoA synthetase beta subunit, putative [Trichophyton verrucosum HKI 0517] gi|291184822|gb|EFE40332.1| succinyl-CoA synthetase beta subunit, putative [Trichophyton verrucosum HKI 0517] Length = 698 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 116/271 (42%), Positives = 176/271 (64%), Gaps = 12/271 (4%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 T++VGG+ P G ++ +P+F +V A+E+ +AS +YVP + AI E++EA Sbjct: 108 TKIVGGVKPGV-----EGEHLGLPIFPSVRVAQEKAKPDASAVYVPGNQTAKAIEEALEA 162 Query: 94 EIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKG 151 EIPLIV + E +P+ DM+++ + L+ +S SRL+GPNCPGI++ C+IG P F G Sbjct: 163 EIPLIVAVAEHVPIHDMLKIHSMLKTQSKSRLVGPNCPGIISAVGKCRIGFQPLPCFAPG 222 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 +VGI+++SGTL YE V T++ GLGQS +G+GGD + GT+F+D L++F D+ T I++ Sbjct: 223 NVGIVAKSGTLGYETVASTTRAGLGQSLCIGMGGDVLAGTDFVDALKVFEHDDDTHGIII 282 Query: 212 VGEIGGSAEEEAAQFLKDEAKR---GRKKPIVGFVAGKTAPPGRTMGH--AGAVISGGKG 266 VGEIGG AE EAA+++K +R + +PI+ + G APPGR MGH AGA + G+ Sbjct: 283 VGEIGGEAEMEAAEWIKGYRRRISEAKFRPIMALIGGIEAPPGRVMGHADAGAWTAEGEP 342 Query: 267 GAEDKINAMKEAGICIAPSPARIGRSLVELL 297 A KI A++ AG+ + P + G + LL Sbjct: 343 DARTKIQALQSAGVVMVDHPEKFGEGMKVLL 373 >gi|70607033|ref|YP_255903.1| succinyl-CoA ligase, alfa chain [Sulfolobus acidocaldarius DSM 639] gi|68567681|gb|AAY80610.1| succinyl-CoA ligase, alfa chain [Sulfolobus acidocaldarius DSM 639] Length = 256 Score = 198 bits (503), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 123/269 (45%), Positives = 174/269 (64%), Gaps = 13/269 (4%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 +L T++V G+ P KG T NVPV+ TVA+A + +AS+I+VP A DA+ Sbjct: 1 MLKYGTKIVAGVTPGKGGTKVN----NVPVYDTVADAVKEHEIDASIIFVPAKFATDAVY 56 Query: 89 ESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF 148 E+I+ I LIV ITE IPVLDM+R+ + +R+IGPNCPG++ PD +GI+P F Sbjct: 57 EAIDNGIKLIVVITEHIPVLDMLRISKYAKLKGTRIIGPNCPGLIVPDEALLGILPPRPF 116 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 RKG +GI+SRSGTLTYE + + +GQST +GIGGDP+ GT +V+++F D TE Sbjct: 117 RKGKIGIVSRSGTLTYE--ISETIKHIGQSTVIGIGGDPIIGTTMDEVVQMFDQDPETEE 174 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 I+++GEIGG+ EE A+ K+ + + ++ ++AG TAP + MGHAGAV+ G G Sbjct: 175 IIVIGEIGGTMEERVAKLKKEGKIKKK---MIAYIAGMTAPREKRMGHAGAVVYMGMGTF 231 Query: 269 EDKINAMKEAGICIAPSPARIGRSLVELL 297 + KINA K AGI +A +P I +ELL Sbjct: 232 DSKINAFKNAGIPVAKTPYEI----LELL 256 >gi|171687991|ref|XP_001908936.1| hypothetical protein [Podospora anserina S mat+] gi|170943957|emb|CAP69609.1| unnamed protein product [Podospora anserina S mat+] Length = 634 Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 117/296 (39%), Positives = 173/296 (58%), Gaps = 21/296 (7%) Query: 12 LVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAA 71 + QG TGK T + + +I + T +VGG+ P + TG ++ +PV TV + Sbjct: 1 MFQGFTGKQATANAKDSIAWG-TNIVGGVRPGR-----TGEHLGLPVLPTV------QSV 48 Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCP 130 A+ IYV A AI E+IEAE+PLIV + E IP+ DM+R+ + L+ +S SRL+GPN P Sbjct: 49 YATAIYVAAHQAPGAIEEAIEAEVPLIVAVAEHIPLHDMLRIHSILKTQSKSRLVGPNSP 108 Query: 131 GILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 GI++ C+IG P F G +GI+++SGTL+YE V T++ GLGQS +G+GGD V Sbjct: 109 GIISAVGKCRIGFQPLPCFSPGKIGIIAKSGTLSYETVASTTRAGLGQSLCIGVGGDIVP 168 Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE-------AKRGRKKPIVGF 242 GT+ + + D TE+I ++GEIGG E +AA++ + + +PIVG Sbjct: 169 GTDLREAFTVLENDSDTEAIAVIGEIGGLGELDAAEWYYSDLLSFSHTNSKLNHRPIVGL 228 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +AG P GR MGHAGA G+ A++KI A+ AG+ + P + G + LG Sbjct: 229 IAGIHEPRGRIMGHAGAFTIAGEPDAKEKIEALVSAGVTMVTHPGQFGEAFKARLG 284 >gi|145615655|ref|XP_360366.2| hypothetical protein MGG_05740 [Magnaporthe oryzae 70-15] gi|145022445|gb|EDK06465.1| hypothetical protein MGG_05740 [Magnaporthe oryzae 70-15] Length = 1341 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 112/291 (38%), Positives = 174/291 (59%), Gaps = 6/291 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ +T+VL QG TG+ T + +I + T VVGG+ P + T+ T G +PV + Sbjct: 444 NLLIGAHTRVLYQGFTGRQATANAAASIAW-GTNVVGGVSPGRSGTHETLG---LPVLGS 499 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA +A+ I+V AI E+++AEI L+V + E +P+ DM+RV L +S Sbjct: 500 VREAAAALRPDATAIFVAADQTAAAIEEAVQAEIGLVVAVAEHVPMRDMLRVHDVLRTQS 559 Query: 121 SSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+G N PGI+ P C++G P +F G VGI ++SGTL+YE T++ GLGQS Sbjct: 560 RTRLVGANSPGIVAPRGRCRVGFQPLGVFSPGKVGIAAKSGTLSYEVAASTTRAGLGQSL 619 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VG+GGD + GT+ + L + L D+ATE++ +VGE+GG E EAA+ +++ + G +KPI Sbjct: 620 CVGVGGDVLAGTDMCEALGVLLRDDATEAVALVGELGGVGELEAAELIREYRRSGGRKPI 679 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 V +AG R +GHAGA A K A+++ G+ + P+ +G Sbjct: 680 VALLAGLGVESERVIGHAGAFWEKRTELARTKQRALEDIGVSLVTHPSEMG 730 >gi|299134898|ref|ZP_07028090.1| CoA-binding domain protein [Afipia sp. 1NLS2] gi|298590708|gb|EFI50911.1| CoA-binding domain protein [Afipia sp. 1NLS2] Length = 297 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 128/291 (43%), Positives = 188/291 (64%), Gaps = 15/291 (5%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFTT 61 ++ + KVLVQG+TGK G F +E+ + T V G++PK+ G T+ ++ P++ + Sbjct: 1 MIYRRGQKVLVQGMTGKQGAFWSER-MREMGTDVAAGVNPKRAGETF-----LDTPIYGS 54 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 EA + T + SVI++PPS A AII++I+A I IV +TE IP D++ + AR S Sbjct: 55 AVEATKHTPCDVSVIFIPPSMAKAAIIDAIDAGIGTIVTLTEHIPAHDVLEIFARQRVSK 114 Query: 122 SRLIGPNCPGILTPDSCKIGIMPG---SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 SR+IGPN GI+TP +GIMPG +IF+ G VG++SRSG+L ++ LGQS Sbjct: 115 SRIIGPNTAGIVTPGEGFVGIMPGHNPNIFKPGRVGVISRSGSLGTLMCLNLTRANLGQS 174 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GIGGDP+ GT D L D T+++V+VGEIGG+ EEEAA+ R KKP Sbjct: 175 AFIGIGGDPIIGTTTRDALMELDRDAKTDAVVLVGEIGGAMEEEAAE-----YARTMKKP 229 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 IV F+AG+++PP + MGHAGA+++GG+GG K A+++AGI +A +PA + Sbjct: 230 IVSFIAGRSSPPDKKMGHAGAIVTGGRGGYASKRAALEKAGIQVADTPAEV 280 >gi|225574244|ref|ZP_03782854.1| hypothetical protein RUMHYD_02308 [Blautia hydrogenotrophica DSM 10507] gi|225038534|gb|EEG48780.1| hypothetical protein RUMHYD_02308 [Blautia hydrogenotrophica DSM 10507] Length = 289 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 118/297 (39%), Positives = 183/297 (61%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+ K TKVLVQ +TGK+G+ T + +L T++V G+ P KG G VPV+ Sbjct: 1 MAILIGKETKVLVQAITGKSGSLQT-KVMLDAGTKIVAGVTPGKGGQEVHG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 ++EAK+ + + +VPP+ A D+ E+I+A I L+V TE I + D+V + A + Sbjct: 56 YISEAKKEHDFDTVISFVPPAAAKDSCFEAIDAGIRLLVLTTEEIALQDVVEIIAYAKAH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GP C G++ P +CK+G P F G VG++S+SG L+YE + G+GQS Sbjct: 116 GTTLVGPGCAGVIAPGTCKVGAHPVRFFCPGQVGVVSKSGALSYEIGKTLTDNGIGQSGV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 V IGG P+ G D +EL+ D T+ IV++GEIGG +EEEAA ++K KP+V Sbjct: 176 VAIGGGPIWGFTQRDAIELYEEDPDTKVIVLLGEIGGGSEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + G+ AP G+++GHAGA++SG G A+ KI A+++AG+ + +P + + + LL Sbjct: 232 SLIVGRNAPQGKSLGHAGAIVSGNVGTAKTKIEALQDAGVHVVKNPVEMVKVIRALL 288 >gi|320593459|gb|EFX05868.1| succinyl-synthetase subunit [Grosmannia clavigera kw1407] Length = 707 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 119/294 (40%), Positives = 182/294 (61%), Gaps = 9/294 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + + ++T+V+ QG TG+ T + +++ + T VVGG+ P + +G ++ +P+ +V Sbjct: 36 LRIGRHTRVIFQGFTGRQATANARESLAW-GTNVVGGVTPGR-----SGEHLGLPLLPSV 89 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSS 121 A A +A+ IYVP + A AI E+I AE+PL+V + E IP+ M+R+ A L +++ Sbjct: 90 AAAVTALRPHATGIYVPAALAPAAIEEAIAAEVPLVVAVAEHIPLHAMLRISAVLRTQTA 149 Query: 122 SRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+G N PGI+ C+IG P S F G VGI +RSGTL+YEAV T++ GLGQS Sbjct: 150 SRLVGANSPGIIAAVGRCRIGFQPLSCFEAGRVGIAARSGTLSYEAVASTTRAGLGQSLC 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKPI 239 +G+GGD V GT+ + L + D T++I ++GEIGG++E EAA ++++ + KPI Sbjct: 210 IGVGGDVVPGTDLREALTILATDPDTDAIALIGEIGGTSELEAAAWIREYHIREPNPKPI 269 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 V VAG PGR MGHAGA G+ A +KI A++ AG I P + G ++ Sbjct: 270 VALVAGTNCVPGRMMGHAGAFSLPGEPDAHEKIRALQIAGATIVDHPEKFGEAI 323 >gi|270700774|ref|ZP_06223031.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae HK1212] gi|270315892|gb|EFA27976.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae HK1212] Length = 155 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 97/147 (65%), Positives = 114/147 (77%), Gaps = 4/147 (2%) Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 + I NCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST V Sbjct: 11 DQRIKNNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTCV 70 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 71 GIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDHV----TKPVVA 126 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGA 268 ++AG TAP G+ MGHAGA+ISGGKG A Sbjct: 127 YIAGITAPKGKRMGHAGAIISGGKGTA 153 >gi|239906516|ref|YP_002953257.1| succinyl-CoA synthetase beta chain/succinyl-CoA synthetase alpha chain [Desulfovibrio magneticus RS-1] gi|239796382|dbj|BAH75371.1| succinyl-CoA synthetase beta chain/succinyl-CoA synthetase alpha chain [Desulfovibrio magneticus RS-1] Length = 705 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 122/274 (44%), Positives = 168/274 (61%), Gaps = 10/274 (3%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 ++ VLVQGLTG+AG H + Y T VV G+ P +G + G +PV+ TVAEA Sbjct: 421 DSGVLVQGLTGRAGRAHARRMRAY-GTPVVAGVTPFRGGSEVDG----LPVYDTVAEAMG 475 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGP 127 R SVI+VP +GA DAI E+ A + IVCIT+GIP DM+ V+A L + L+GP Sbjct: 476 RHDIALSVIFVPAAGAADAIEEAAAAGVARIVCITDGIPQRDMLSVRAALAGRQTTLVGP 535 Query: 128 NCPGILTPDSC-KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 N PG++ P GIMP F G V I SRSGTLTYE + + G+GQ+ A G+GGD Sbjct: 536 NTPGLILPGQWFSAGIMPTEPFTPGPVAIFSRSGTLTYEVASRLTAAGIGQALAAGMGGD 595 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P G F+++ E+ D +++++GE+GG+AEEE A+++ A KP+ FVAG Sbjct: 596 PFGGAGFVELCEMVRDDARVRAVMVIGEVGGTAEEELAEYV---ASTKYPKPVAAFVAGV 652 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +APPGRT+GHAGA++ GG K+ + AGI Sbjct: 653 SAPPGRTLGHAGALLE-RPGGVAAKLACLARAGI 685 >gi|118575315|ref|YP_875058.1| succinyl-CoA synthetase, alpha subunit [Cenarchaeum symbiosum A] gi|118193836|gb|ABK76754.1| succinyl-CoA synthetase, alpha subunit [Cenarchaeum symbiosum A] Length = 304 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 109/279 (39%), Positives = 160/279 (57%), Gaps = 8/279 (2%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V+VQG+TGK G+ HT Y T + G+ ++G+ + G +P++ + EA E T Sbjct: 22 VVVQGITGKFGSTHTRLMKEYG-TNIAAGVTLREGAKDFEG----IPLYGNIGEAVEATG 76 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 A S ++VP A +++EA I L+V I E +PV D + + K + +IGPN P Sbjct: 77 AQISAMFVPAKFFLSAAKDALEAGIKLLVAIPEHVPVRDTLELLELARKKDAIVIGPNTP 136 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G++ P+ K+GIMP F+ G V +LS+SGTL YE +Q G GQ+ +GIGGDP+ G Sbjct: 137 GVIIPEVIKVGIMPAGPFKLGDVAVLSKSGTLLYEISNALTQAGFGQAITIGIGGDPING 196 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 T ID E+ +V+VGEIGG AEE AQ + + KP V ++AG+ AP Sbjct: 197 TRLIDAFEMVREIPGLRGLVVVGEIGGDAEELLAQRITETK---FNKPTVAYIAGRAAPK 253 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + MGHAGA++ G G AE KI+ +A + +A PA + Sbjct: 254 EKRMGHAGAIVMGNYGSAESKISMFNKANVPVAKRPAEV 292 >gi|320031967|gb|EFW13924.1| succinyl-CoA synthetase, alpha subunit [Coccidioides posadasii str. Silveira] Length = 712 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 128/312 (41%), Positives = 195/312 (62%), Gaps = 26/312 (8%) Query: 8 NTKVLVQGLTG-----------------KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT 50 +TKVL QG TG K T + ++++ + T++VGG+ P Sbjct: 58 DTKVLFQGFTGTHTYLFLYKEIYPKPNNKMATANVKESLQWG-TKIVGGVKPG-----VE 111 Query: 51 GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM 110 G ++ +PVF +V A+E+ +A+ +YVP + AI E+IEAEIPL+V + E +P+ D+ Sbjct: 112 GEHLGLPVFPSVRVAQEKARPDATAVYVPGNQTAAAIEEAIEAEIPLVVAVAEHVPIHDI 171 Query: 111 VRVKARLE-KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 +R+ + L +S +RL+G NCPGI++ C+IG P F G VGI+++SGTL+YE V Sbjct: 172 LRIHSILRTQSKTRLVGANCPGIISAIGKCRIGFQPLPCFSSGHVGIVAKSGTLSYETVA 231 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 T++ GLGQS +G+GGD + GT+F+D L++F D+ T I++VGEIGG+AE +AA+++K Sbjct: 232 STTRAGLGQSLCIGMGGDVLAGTDFVDALKVFEHDDDTHGIIIVGEIGGTAEMDAAEWIK 291 Query: 229 DEAKR-GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 D +R KPI+G V G AP GR MGHAGA + G+ A+ KI A+++AG I P Sbjct: 292 DYRRRTANPKPIMGLVGGIEAPHGRIMGHAGAWTAPGEPDAQMKIKALQDAGAVIVDHPE 351 Query: 288 RIGRSLVELLGS 299 + G + LLG+ Sbjct: 352 KFGEGMKTLLGN 363 >gi|303320235|ref|XP_003070117.1| succinyl-CoA synthetase beta chain, putative [Coccidioides posadasii C735 delta SOWgp] gi|240109803|gb|EER27972.1| succinyl-CoA synthetase beta chain, putative [Coccidioides posadasii C735 delta SOWgp] Length = 712 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 128/312 (41%), Positives = 195/312 (62%), Gaps = 26/312 (8%) Query: 8 NTKVLVQGLTG-----------------KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT 50 +TKVL QG TG K T + ++++ + T++VGG+ P Sbjct: 58 DTKVLFQGFTGTHTYLFLYKEIYPKPNKKMATANVKESLQWG-TKIVGGVKPG-----VE 111 Query: 51 GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM 110 G ++ +PVF +V A+E+ +A+ +YVP + AI E+IEAEIPL+V + E +P+ D+ Sbjct: 112 GEHLGLPVFPSVRVAQEKARPDATAVYVPGNQTAAAIEEAIEAEIPLVVAVAEHVPIHDI 171 Query: 111 VRVKARLE-KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 +R+ + L +S +RL+G NCPGI++ C+IG P F G VGI+++SGTL+YE V Sbjct: 172 LRIHSILRTQSKTRLVGANCPGIISAIGKCRIGFQPLPCFSSGHVGIVAKSGTLSYETVA 231 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 T++ GLGQS +G+GGD + GT+F+D L++F D+ T I++VGEIGG+AE +AA+++K Sbjct: 232 STTRAGLGQSLCIGMGGDVLAGTDFVDALKVFEHDDDTHGIIIVGEIGGTAEMDAAEWIK 291 Query: 229 DEAKR-GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 D +R KPI+G V G AP GR MGHAGA + G+ A+ KI A+++AG I P Sbjct: 292 DYRRRTANPKPIMGLVGGIEAPHGRIMGHAGAWTAPGEPDAQMKIKALQDAGAVIVDHPE 351 Query: 288 RIGRSLVELLGS 299 + G + LLG+ Sbjct: 352 KFGEGMKTLLGN 363 >gi|147906027|ref|NP_001088098.1| succinate-CoA ligase, alpha subunit [Xenopus laevis] gi|52354667|gb|AAH82922.1| LOC494796 protein [Xenopus laevis] Length = 195 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 113/185 (61%), Positives = 148/185 (80%), Gaps = 1/185 (0%) Query: 110 MVRVKARL-EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 MV+VK RL ++++RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV Sbjct: 1 MVQVKHRLLRQTTTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVH 60 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 QT+Q GLGQS VGIGGDP GT FID L++FL+D TE I+++GEIGGS EE AA+FL+ Sbjct: 61 QTTQVGLGQSLCVGIGGDPFNGTNFIDCLDVFLSDPKTEGIILIGEIGGSGEENAAEFLR 120 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 KP+V F+AG TAPPGR MGHAGA+I+GGKGGA++KI A+++AG+ ++ SPA+ Sbjct: 121 VNNSGPNAKPVVSFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQKAGVVVSMSPAQ 180 Query: 289 IGRSL 293 +G ++ Sbjct: 181 LGSTM 185 >gi|300868660|ref|ZP_07113272.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Oscillatoria sp. PCC 6506] gi|300333354|emb|CBN58464.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Oscillatoria sp. PCC 6506] Length = 299 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 112/284 (39%), Positives = 161/284 (56%), Gaps = 16/284 (5%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 TKVLVQG+T + + T VV G+ P G G +PVF V +A Sbjct: 6 QTKVLVQGITESPASTQAALMMKAYGTNVVAGVSPGLGGQELHG----IPVFDLVEQALS 61 Query: 68 RTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + SVI+V P DA +E+I A I IV +TEG+P LDMVR+ + E + + ++G Sbjct: 62 AFGKIDTSVIFVHPYSVLDAALEAIAAGIQQIVIVTEGVPPLDMVRLVRKAEATETLVVG 121 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNCPGI+ PD +G P + G VG++SRS TLTYE Q + LGQS V IG D Sbjct: 122 PNCPGIIVPDKLLLGTHPSEFYTPGPVGLISRSNTLTYEIALQLTNAKLGQSIGVSIGSD 181 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + G+ F+ L++ D++T++IV+VGE+G +EE AA ++ + KP++ ++AG+ Sbjct: 182 VIVGSSFMQWLQILDEDDSTDAIVLVGEVGSGSEEAAASYIAE----AIDKPVIAYIAGR 237 Query: 247 TAPPGRTMGHAGAVISGG-------KGGAEDKINAMKEAGICIA 283 AP G+ +GHAG +IS G AE KI A +EA I +A Sbjct: 238 YAPKGQPLGHAGTLISSRAAVRTTEAGTAESKIAAFQEAKIPVA 281 >gi|85706367|ref|ZP_01037461.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. 217] gi|85669140|gb|EAQ24007.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. 217] Length = 159 Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 97/145 (66%), Positives = 118/145 (81%), Gaps = 5/145 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVDK+T+V+ QGLTG GTFH+EQAI Y TQ+VGG+ P KG T ++++PVF Sbjct: 1 MAVLVDKHTRVICQGLTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTT----HLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM+RVK LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPG 145 SRLIGPNCPGI+TPD+CKIGIMPG Sbjct: 116 KSRLIGPNCPGIITPDACKIGIMPG 140 >gi|330834512|ref|YP_004409240.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Metallosphaera cuprina Ar-4] gi|329566651|gb|AEB94756.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Metallosphaera cuprina Ar-4] Length = 263 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 115/264 (43%), Positives = 171/264 (64%), Gaps = 9/264 (3%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 T++V G+ P KG + G +PV+ TV EA + +AS+I+VP A +A+ E++++ Sbjct: 7 TKIVAGVTPGKGGSDVLG----IPVYDTVKEATKEHEIDASIIFVPAKFASEAVYEAVDS 62 Query: 94 EIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSV 153 I L+V ITE IPV+D+ + + +R++GPNCPG++ P +GI+P F+KG+V Sbjct: 63 GIGLVVVITEHIPVVDVAKFVRYAKSRGTRIVGPNCPGLIVPGESLLGILPSKYFKKGNV 122 Query: 154 GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVG 213 GI+SRSGTLTYE ++ GQST +GIGGDP+ GT +V++ F D+ T++IV++G Sbjct: 123 GIVSRSGTLTYEVAHLLNE--TGQSTVIGIGGDPIIGTSLQEVVQEFEEDQQTDAIVIIG 180 Query: 214 EIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN 273 EIGG+ EE+ AQ LK E K KPIV ++AG TAP + MGHAGAV+ G G E K+ Sbjct: 181 EIGGTMEEKVAQ-LKKEGK--LTKPIVAYIAGLTAPKEKRMGHAGAVVYMGMGTFESKVE 237 Query: 274 AMKEAGICIAPSPARIGRSLVELL 297 ++A I +A +P I L ++L Sbjct: 238 MFRKADIPVAKTPYEIRDVLTKIL 261 >gi|255710353|gb|ACU30996.1| succinyl-CoA synthetase alpha subunit [Ochlerotatus triseriatus] Length = 173 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 99/170 (58%), Positives = 134/170 (78%) Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 GI+ P+ CKIGIMPG I ++GS+G++SRSG LTYEAV QT++ GLGQ+ VGIGGDP G Sbjct: 1 GIIAPEQCKIGIMPGHIHKRGSIGVVSRSGALTYEAVHQTTEVGLGQTLCVGIGGDPFNG 60 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 T+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V F+AG +APP Sbjct: 61 TDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLMQYNQGIKAKPVVSFIAGLSAPP 120 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GR MGHAGA+ISGGKGGA+DKINA+++AG+ + SPA++G+ L + + L Sbjct: 121 GRRMGHAGAIISGGKGGAQDKINALEKAGVIVTRSPAQMGKELFKEMKRL 170 >gi|164658860|ref|XP_001730555.1| hypothetical protein MGL_2351 [Malassezia globosa CBS 7966] gi|159104451|gb|EDP43341.1| hypothetical protein MGL_2351 [Malassezia globosa CBS 7966] Length = 181 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 99/175 (56%), Positives = 137/175 (78%), Gaps = 1/175 (0%) Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPNCPG++ P+ CKIGIMP I G +GI+SRSGTLTYEAV QT+ GLGQS VGI Sbjct: 1 MVGPNCPGVINPEGCKIGIMPAHIHMPGKIGIVSRSGTLTYEAVNQTTNVGLGQSLCVGI 60 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL-KDEAKRGRKKPIVGF 242 GGDP G+ +D+++++L D+ +E IV++GEIGGS EE+AA++L K R KP+V F Sbjct: 61 GGDPYPGSATVDLVKMYLEDDRSEGIVIIGEIGGSMEEDAAEYLEKYNLTRPNPKPVVAF 120 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG+TAPPGR MGHAGA+ISGGKGGA+ K++A+++AG +A SPA+IG +++ + Sbjct: 121 IAGRTAPPGRRMGHAGAIISGGKGGADSKVSALEKAGAIVADSPAKIGELMLKAM 175 >gi|240276118|gb|EER39630.1| succinyl-CoA ligase alpha-chain [Ajellomyces capsulatus H143] Length = 645 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 125/267 (46%), Positives = 168/267 (62%), Gaps = 8/267 (2%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 T+VVGG+ P G ++ +PVF +V A+E+ +A+ IYVP AI E+I A Sbjct: 35 TKVVGGVKPGV-----EGEHLGLPVFPSVQVAQEKLKPDATAIYVPGPQTAQAIEEAIAA 89 Query: 94 EIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKG 151 EIPLIV + E +PV DM+R+ A L+ +S SRL+G NCPGI++ C+IG P S F G Sbjct: 90 EIPLIVAVAEHVPVHDMLRIHAMLQTQSKSRLVGANCPGIISAIGRCRIGFQPLSCFAPG 149 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 +GI+++SGTL YE V T++ GLGQS +G+GGD V GT F+D L LF DE T I++ Sbjct: 150 HIGIVAKSGTLGYETVAATTRAGLGQSLCIGVGGDVVAGTSFVDALNLFEHDEETHGIII 209 Query: 212 VGEIGGSAEEEAAQFLKDEAKR-GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 VGEIGGSAE AA+++ D +R KPI+ V G APPGR MGHAGA G A+ Sbjct: 210 VGEIGGSAEIAAAEWIFDYRRRTADPKPIMAVVGGIYAPPGRVMGHAGAWAGLGDPDAQT 269 Query: 271 KINAMKEAGICIAPSPARIGRSLVELL 297 KI A++ AG + P + G + LL Sbjct: 270 KIRALQNAGAVMVDHPEKFGEGMRTLL 296 >gi|325090016|gb|EGC43326.1| succinyl-CoA ligase alpha-chain [Ajellomyces capsulatus H88] Length = 648 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 125/267 (46%), Positives = 168/267 (62%), Gaps = 8/267 (2%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 T+VVGG+ P G ++ +PVF +V A+E+ +A+ IYVP AI E+I A Sbjct: 35 TKVVGGVKPGV-----EGEHLGLPVFPSVQVAQEKLKPDATAIYVPGPQTAQAIEEAIAA 89 Query: 94 EIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKG 151 EIPLIV + E +PV DM+R+ A L+ +S SRL+G NCPGI++ C+IG P S F G Sbjct: 90 EIPLIVAVAEHVPVHDMLRIHAMLQTQSKSRLVGANCPGIISAIGRCRIGFQPLSCFAPG 149 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 +GI+++SGTL YE V T++ GLGQS +G+GGD V GT F+D L LF DE T I++ Sbjct: 150 HIGIVAKSGTLGYETVAATTRAGLGQSLCIGVGGDVVAGTSFVDALNLFEHDEETHGIII 209 Query: 212 VGEIGGSAEEEAAQFLKDEAKR-GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 VGEIGGSAE AA+++ D +R KPI+ V G APPGR MGHAGA G A+ Sbjct: 210 VGEIGGSAEIAAAEWIFDYRRRTADPKPIMAVVGGIYAPPGRVMGHAGAWAGLGDPDAQT 269 Query: 271 KINAMKEAGICIAPSPARIGRSLVELL 297 KI A++ AG + P + G + LL Sbjct: 270 KIRALQNAGAVMVDHPEKFGEGMRTLL 296 >gi|225560012|gb|EEH08294.1| succinyl-CoA ligase alpha-chain [Ajellomyces capsulatus G186AR] Length = 648 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 125/267 (46%), Positives = 168/267 (62%), Gaps = 8/267 (2%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 T+VVGG+ P G ++ +PVF +V A+E+ +A+ IYVP AI E+I A Sbjct: 35 TKVVGGVKPG-----VEGEHLGLPVFPSVQVAQEKLKPDATAIYVPGPQTAQAIEEAIAA 89 Query: 94 EIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKG 151 EIPLIV + E +PV DM+R+ A L+ +S SRL+G NCPGI++ C+IG P S F G Sbjct: 90 EIPLIVAVAEHVPVHDMLRIHAMLQTQSKSRLVGANCPGIISAIGRCRIGFQPLSCFAPG 149 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 +GI+++SGTL YE V T++ GLGQS +G+GGD V GT F+D L LF DE T I++ Sbjct: 150 HIGIVAKSGTLGYETVAATTRAGLGQSLCIGVGGDIVAGTSFVDALNLFEHDEETHGIII 209 Query: 212 VGEIGGSAEEEAAQFLKDEAKR-GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 VGEIGGSAE AA+++ D +R KPI+ V G APPGR MGHAGA G A+ Sbjct: 210 VGEIGGSAEIAAAEWIFDYRRRTADPKPIMAVVGGIYAPPGRVMGHAGAWAGLGDPDAQT 269 Query: 271 KINAMKEAGICIAPSPARIGRSLVELL 297 KI A++ AG + P + G + LL Sbjct: 270 KIRALQNAGAVMVDHPEKFGEGMRTLL 296 >gi|305682417|dbj|BAJ16296.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi] gi|305682423|dbj|BAJ16299.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi] gi|305682429|dbj|BAJ16302.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi] Length = 144 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 101/147 (68%), Positives = 123/147 (83%), Gaps = 3/147 (2%) Query: 101 ITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSG 160 ITEGIPVLDM+++K L+ S +RLIGPNCPGI+TP+ CKIGIMPG I + GS+GI+SRSG Sbjct: 1 ITEGIPVLDMLKIKQVLKGSKTRLIGPNCPGIITPEQCKIGIMPGHIHKAGSIGIISRSG 60 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 TLTYEAV QT++ GLGQST +GIGGDP+ GT F+D LELFLAD+ T++I+++GEIGGSAE Sbjct: 61 TLTYEAVAQTTEVGLGQSTCIGIGGDPINGTSFVDCLELFLADDDTKAIIIIGEIGGSAE 120 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKT 247 EEAA FLK KKPIVGF+AG T Sbjct: 121 EEAADFLKSSR---IKKPIVGFIAGVT 144 >gi|305682425|dbj|BAJ16300.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi] Length = 144 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 101/147 (68%), Positives = 122/147 (82%), Gaps = 3/147 (2%) Query: 101 ITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSG 160 ITEGIPVLDM+++K L+ S +RLIGPNCPGI+TP+ CKIGIMPG I + GS+GI+SRSG Sbjct: 1 ITEGIPVLDMLKIKQVLKGSKTRLIGPNCPGIITPEQCKIGIMPGHIHKAGSIGIISRSG 60 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 TLTYEAV QT+ GLGQST +GIGGDP+ GT FID LELFLAD+ T++I+++GEIGG+AE Sbjct: 61 TLTYEAVAQTTDAGLGQSTCIGIGGDPINGTSFIDCLELFLADDDTKAIIIIGEIGGTAE 120 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKT 247 EEAA FLK KKPIVGF+AG T Sbjct: 121 EEAADFLKSSR---IKKPIVGFIAGVT 144 >gi|305682419|dbj|BAJ16297.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi] Length = 144 Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 100/147 (68%), Positives = 122/147 (82%), Gaps = 3/147 (2%) Query: 101 ITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSG 160 ITEGIPVLDM+++K L+ S +RLIGPNCPGI+TP+ CKIGIMPG I + GS+GI+SRSG Sbjct: 1 ITEGIPVLDMLKIKQVLKGSKTRLIGPNCPGIITPEQCKIGIMPGHIHKAGSIGIISRSG 60 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 TLTYEAV QT++ GLGQST +GIGGDP+ GT F+D LELFL D+ T++I+++GEIGGSAE Sbjct: 61 TLTYEAVAQTTEVGLGQSTCIGIGGDPINGTSFVDCLELFLEDDDTKAIIIIGEIGGSAE 120 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKT 247 EEAA FLK KKPIVGF+AG T Sbjct: 121 EEAADFLKSSK---IKKPIVGFIAGVT 144 >gi|305682427|dbj|BAJ16301.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi] Length = 144 Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 101/147 (68%), Positives = 122/147 (82%), Gaps = 3/147 (2%) Query: 101 ITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSG 160 ITEGIPVLDM+++K L+ S +RLIGPNCPGI+TP+ CKIGIMPG I + GS+GI+SRSG Sbjct: 1 ITEGIPVLDMLKIKQVLKGSKTRLIGPNCPGIITPEQCKIGIMPGHIHKAGSIGIISRSG 60 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 TLTYEAV QT++ GLGQST +GIGGDP+ GT F+D LELFLAD T++I+++GEIGGSAE Sbjct: 61 TLTYEAVAQTTEVGLGQSTCIGIGGDPINGTSFVDCLELFLADGDTKAIIIIGEIGGSAE 120 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKT 247 EEAA FLK KKPIVGF+AG T Sbjct: 121 EEAADFLKSSR---IKKPIVGFIAGVT 144 >gi|305682431|dbj|BAJ16303.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi] Length = 144 Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 100/147 (68%), Positives = 122/147 (82%), Gaps = 3/147 (2%) Query: 101 ITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSG 160 ITEGIPVLDM+++K L+ S +RLIGPNCPGI+TP+ CKIGIMPG I + GS+GI+SRSG Sbjct: 1 ITEGIPVLDMLKIKQVLKGSKTRLIGPNCPGIITPEQCKIGIMPGHIHKAGSIGIISRSG 60 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 TLTYEAV QT++ GLGQST +GIGGDP+ GT F+D L LFLAD+ T++I+++GEIGGSAE Sbjct: 61 TLTYEAVAQTTEVGLGQSTCIGIGGDPINGTSFVDCLALFLADDDTKAIIIIGEIGGSAE 120 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKT 247 EEAA FLK KKPIVGF+AG T Sbjct: 121 EEAADFLKSSR---IKKPIVGFIAGVT 144 >gi|303327247|ref|ZP_07357689.1| succinate-CoA ligase (ADP-forming), alpha subunit [Desulfovibrio sp. 3_1_syn3] gi|302863235|gb|EFL86167.1| succinate-CoA ligase (ADP-forming), alpha subunit [Desulfovibrio sp. 3_1_syn3] Length = 296 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 116/302 (38%), Positives = 180/302 (59%), Gaps = 11/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI V+K+++V VQG+TGK G+F T + TQVV G+ P K G VPV+ Sbjct: 1 MSIFVNKDSRVAVQGVTGKEGSFWTRH-MKEMGTQVVFGVTPGKEGQDVAG----VPVYH 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V A+ ++++VPP DAI E+++A I I +GIP+ + V+++ Sbjct: 56 SVRRGMREHPADVAMLFVPPRFTKDAIFEALDAGIRKICATADGIPLHESVQIRKAALSC 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++G N GI++ +GI+P S+++KG VG+++RSG+LT E + + G G Sbjct: 116 GAMVVGGNTTGIISVGEALLGIIPYWIDSVYKKGHVGVMTRSGSLTNEVTAEIIKGGFGV 175 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 +T VG+GGDPV GT F ++L ++ D T ++V++GE+GGS EEE A+ ++ K Sbjct: 176 TTLVGVGGDPVPGTRFAELLPMYQEDPDTHALVVIGELGGSMEEEVAEAVEAGV---FSK 232 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+V F+ G+TAP G+ MGHAGA+ S G G + K A+ AG +A P +G L E+L Sbjct: 233 PLVVFMGGRTAPEGKRMGHAGAIASHGHGTVKGKTAALLRAGAGVAAKPGEVGPLLREML 292 Query: 298 GS 299 GS Sbjct: 293 GS 294 >gi|305682421|dbj|BAJ16298.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi] Length = 144 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 100/147 (68%), Positives = 122/147 (82%), Gaps = 3/147 (2%) Query: 101 ITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSG 160 ITEGIPVLDM+++K L+ S +RLIGPNCPGI+TP+ CKIGIMPG I + GS+GI+SRSG Sbjct: 1 ITEGIPVLDMLKIKQVLKGSKTRLIGPNCPGIITPEQCKIGIMPGHIHKAGSIGIISRSG 60 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 TLTYEAV QT++ GLGQST +GIGGD + GT F+D LELFLAD+ T++I+++GEIGGSAE Sbjct: 61 TLTYEAVAQTTEVGLGQSTCIGIGGDTINGTSFVDCLELFLADDDTKAIIIIGEIGGSAE 120 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKT 247 EEAA FLK KKPIVGF+AG T Sbjct: 121 EEAADFLKSSR---IKKPIVGFIAGVT 144 >gi|115525206|ref|YP_782117.1| succinyl-CoA synthetase, alpha subunit [Rhodopseudomonas palustris BisA53] gi|115519153|gb|ABJ07137.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodopseudomonas palustris BisA53] Length = 306 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 119/291 (40%), Positives = 183/291 (62%), Gaps = 15/291 (5%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTYWTGGNVNVPVFTT 61 I++ K +VLVQG+TGK G+F TE+ + T++V G++PK+ G T+ + +PV+ + Sbjct: 2 IILRKEHRVLVQGITGKQGSFWTEK-MRSVGTRIVAGVNPKRAGETH-----LGIPVYAS 55 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 A T + +V+++PP+ A +A +++IEA L+V +TE IP+ D + + A ++ Sbjct: 56 ARAAMAETPFDVAVMFIPPALAEEAALDAIEAGAQLLVVLTEHIPIHDQMVIHAAARRNG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPG---SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R++GPN G++TP GIMPG SIF+ G VG++SRSG+L ++ GLGQS Sbjct: 116 TRILGPNTAGLVTPGEGFAGIMPGHNGSIFQPGVVGVVSRSGSLGTLVSLNLTRAGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GIGGDP+ GT D LE D T ++V+VGEIGG+ EEEAA + A R KP Sbjct: 176 AFIGIGGDPMIGTTTRDALEALDRDPRTRAVVLVGEIGGAMEEEAATY----AAR-MTKP 230 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +V F+AG+ +PPG+ MGHAGA++ G K A++ AG+ + +PA I Sbjct: 231 VVAFIAGRASPPGKKMGHAGAIVGAAGGSYAGKREALERAGVTVVDTPAEI 281 >gi|38048587|gb|AAR10196.1| similar to Drosophila melanogaster Scsalpha [Drosophila yakuba] Length = 180 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 92/160 (57%), Positives = 125/160 (78%), Gaps = 6/160 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 26 NLKLNGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 80 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 VAEAK+ T +A+VIYVPP GA AIIE+++AEIPLIVCITEG+P DMV+VK A + +S Sbjct: 81 VAEAKKATDPHATVIYVPPPGAAAAIIEALDAEIPLIVCITEGVPQHDMVKVKHALISQS 140 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSG 160 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSG Sbjct: 141 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSG 180 >gi|317486379|ref|ZP_07945207.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6] gi|316922368|gb|EFV43626.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6] Length = 293 Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 111/302 (36%), Positives = 188/302 (62%), Gaps = 13/302 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN-VPVF 59 MSI + K+++V+VQG+TGK G F + + TQVV G+ P K G +V+ +PV+ Sbjct: 1 MSIFIHKDSRVVVQGVTGKEGAFWAKH-MKDMGTQVVFGVTPGK-----EGQDVDGIPVY 54 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V + A+ ++++VPP DA+ E+++A I I I +GIP+ + ++++ Sbjct: 55 HSVRRGIKDHPADVAMLFVPPKFTKDAVFEALDAGIKKICTIADGIPLHEAIQIRRAALS 114 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + ++G N GI++ +G +P +++KG VG+++RSG+LT E + + G G Sbjct: 115 CGAMVVGGNTSGIISVGEAMLGTIPYWIDRVYKKGHVGVMTRSGSLTNEVTAEIVKGGFG 174 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 +T +G+GGDPV GT F ++L L+ AD T ++V++GE+GG+ EEE A+ ++ +A Sbjct: 175 VTTLIGVGGDPVPGTRFAELLPLYEADPDTHAVVIIGELGGTMEEEVAEAMEAKA---FT 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V F+ G+TAP G+ MGHAGA+++GG+G + K A+ +AG +A P+ +G L L Sbjct: 232 KPLVAFMGGRTAPEGKRMGHAGAIVTGGRGTVKGKTEAIVKAGGKVAKRPSEVGALLKAL 291 Query: 297 LG 298 LG Sbjct: 292 LG 293 >gi|284045664|ref|YP_003396004.1| CoA-binding protein [Conexibacter woesei DSM 14684] gi|283949885|gb|ADB52629.1| CoA-binding domain protein [Conexibacter woesei DSM 14684] Length = 307 Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 119/294 (40%), Positives = 168/294 (57%), Gaps = 18/294 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY-CQTQVVGGIHPKKGSTYWTGGNVNVPVF 59 MSILVD T +VQG+TG+ T + + Y +VVGG+ P + G VPVF Sbjct: 1 MSILVDATTTFIVQGITGREAVNLTRECLDYGAGARVVGGVTPGRKGREVHG----VPVF 56 Query: 60 TTVAEAKERTAA--NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 TVA+A E A + SV+ VPP+ DA++E++ I LIV +TE IP D+ + Sbjct: 57 DTVAQAVEHHGAPIDGSVVTVPPAFTKDAVLEAVANGIKLIVIVTERIPRRDVAVMVEFA 116 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPG------SIFRKGSVGILSRSGTLTYEAVFQTS 171 +R+IGPNC GI+ PD K+G + G + G VG++SRSG +T E + Sbjct: 117 SAHGARIIGPNCLGIIVPDVIKMGGIGGPAKDAAKAYSPGPVGVISRSGGMTTEMSSTLT 176 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 GLGQSTAV IGGD + G+ + +++ LF ADE T++IV+ E GG E E A ++K+ Sbjct: 177 AAGLGQSTAVSIGGDAIIGSSYAELMPLFEADEQTQAIVIYTEPGGRMEAELAAWVKEHD 236 Query: 232 KRGRKKPIVGFVAGKTAP--PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 R PIV F+AG+ PG + GHAG ++ G A +KI + EAGI +A Sbjct: 237 SR---LPIVAFMAGRFMDEMPGMSFGHAGTIVEGKADTAAEKIERLAEAGIVVA 287 >gi|295667892|ref|XP_002794495.1| succinyl-CoA ligase subunit alpha [Paracoccidioides brasiliensis Pb01] gi|226285911|gb|EEH41477.1| succinyl-CoA ligase subunit alpha [Paracoccidioides brasiliensis Pb01] Length = 670 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 107/251 (42%), Positives = 157/251 (62%), Gaps = 3/251 (1%) Query: 53 NVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR 112 N+ ++ +A+E+ +A+ IYVP AI E++EAEIPLIV + E +P+ D++R Sbjct: 65 NMQTGNMSSQCKAQEKVRPDATAIYVPGPQTAQAIEEAVEAEIPLIVAVAEHVPIHDILR 124 Query: 113 VKARLE-KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 V A L+ +S SRL+G NCPGI++ C+IG P F G +GI+++SGTL YE V T Sbjct: 125 VHAMLKTQSKSRLVGANCPGIISAIGKCRIGFQPLPCFSPGHIGIVAKSGTLGYETVAST 184 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 ++ GLGQS +G+GGD + GT+F+D L +F D+ T I++VGEIGG+AE AA+++ Sbjct: 185 TRAGLGQSLCIGMGGDVLAGTDFVDALSIFEHDDDTHGIIIVGEIGGTAEIAAAEWIVHY 244 Query: 231 AKR-GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +R KPI+ V G AP GR MGHAGA + G+ A+ KI A+ AG + P Sbjct: 245 RRRSANPKPIMAVVGGIHAPLGRVMGHAGAWVGPGEPDAQTKIKALHNAGAVMVHHPENF 304 Query: 290 GRSLVELLGSL 300 G + LL ++ Sbjct: 305 GEGMKMLLSNM 315 >gi|119493951|ref|ZP_01624512.1| succinyl-CoA synthetase alpha chain [Lyngbya sp. PCC 8106] gi|119452308|gb|EAW33503.1| succinyl-CoA synthetase alpha chain [Lyngbya sp. PCC 8106] Length = 297 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 164/290 (56%), Gaps = 16/290 (5%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 +KVL+QG H + T +V + P +G TY VP+F V +A+ Sbjct: 6 ESKVLIQGNAASQALIHAVLNMKAYGTNIVACVTPGQGGTYLE----EVPIFDLVEQAQA 61 Query: 68 RTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + + SVI+V P A D+ +E+IEA + +V +TEG+P LDMV + + E S + +IG Sbjct: 62 KVGPIDTSVIWVNPYQALDSALEAIEAGVKQLVILTEGMPPLDMVCLIRKAEISETLIIG 121 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+C GI+ P+ +G+ PG + GS+G++SR LTYE Q +Q LGQS ++ IG D Sbjct: 122 PSCAGIIVPNQLLLGLHPGEFYTPGSIGLISRGSRLTYEIASQLTQAKLGQSMSISIGSD 181 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + G+ FI L++ D+ TE+IV+VGE+ G+ EEEAA ++ + KP++ ++AG Sbjct: 182 LIIGSSFIQWLQILDEDDQTEAIVLVGEVSGTGEEEAASYIAETI----DKPVIAYIAGL 237 Query: 247 TAPPGRTMGHAGAVISGGKGGA-------EDKINAMKEAGICIAPSPARI 289 APP + +GH+ + + E KI A K+A I +A P++I Sbjct: 238 YAPPTQMLGHSCTLATSKLLAQTICPPTIESKIEAFKKAKIPLADRPSQI 287 >gi|315426510|dbj|BAJ48142.1| succinyl-CoA synthetase alpha subunit [Candidatus Caldiarchaeum subterraneum] Length = 162 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 89/164 (54%), Positives = 117/164 (71%), Gaps = 3/164 (1%) Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 TP + K+GIMPG IF+KG VGI+SRSGTLTYE + +GLGQST +GIGGDPV G F Sbjct: 1 TPGAAKVGIMPGHIFKKGVVGIVSRSGTLTYEIAHAITVKGLGQSTCIGIGGDPVVGLNF 60 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 IDVLE+F DE TE++V++GEIGG EE AA ++ K KP+V ++AG+TAPP + Sbjct: 61 IDVLEMFRRDEETEAVVLIGEIGGDLEERAADYI---VKTRYPKPVVAYIAGRTAPPEKR 117 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 MGHAGA+IS G G K+ A+ +AG+ +A +P + LV+LL Sbjct: 118 MGHAGAIISLGAGDPASKVKALTQAGVHVASTPGEVADKLVQLL 161 >gi|113476346|ref|YP_722407.1| succinyl-CoA synthetase subunit alpha [Trichodesmium erythraeum IMS101] gi|110167394|gb|ABG51934.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Trichodesmium erythraeum IMS101] Length = 290 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 106/294 (36%), Positives = 164/294 (55%), Gaps = 12/294 (4%) Query: 7 KNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 K +KV+VQG+T K T + C T VV GI P +G W G +PVF+ V +A Sbjct: 6 KYSKVIVQGVTEKIST-QIALTMRSCGTNVVAGISPGEGGEEWLG----IPVFSLVEQAV 60 Query: 67 ERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLI 125 + + SVI +P DA +E+I + + IV ITEG+P LDMV++ + E + + ++ Sbjct: 61 AKMGVIDTSVIVMPAYQVLDAALEAITSGLKQIVIITEGVPPLDMVKLLRKAETTETLIV 120 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 GPNC GI+ P+ +G P + G +GI+SRS TLTYE ++ ++ LGQS V +G Sbjct: 121 GPNCAGIIIPEKLLLGTHPTQFYTPGPIGIISRSNTLTYEVAWELTRSRLGQSICVSLGC 180 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 DP+ G+ F+ L++ D+ TE IV+VGE+GG AEE AA ++ + KP++ ++AG Sbjct: 181 DPIVGSSFLQWLQILDEDDQTELIVLVGEVGGVAEELAASYISETI----DKPVIAYIAG 236 Query: 246 KTAPPGRTMGHAGAVISGG--KGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 AP + +IS + ++ A + A I +A P+ I + LL Sbjct: 237 TCAPINQNYSPVNCLISNKVVREIESERTGAFEGANIPVAKRPSDIPSLVRNLL 290 >gi|186685263|ref|YP_001868459.1| CoA-binding domain-containing protein [Nostoc punctiforme PCC 73102] gi|186467715|gb|ACC83516.1| CoA-binding domain protein [Nostoc punctiforme PCC 73102] Length = 295 Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 106/292 (36%), Positives = 164/292 (56%), Gaps = 15/292 (5%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 +KVL+QG H Q Y T +V G++P G G +PVF V E E Sbjct: 6 ESKVLIQGFCEFISGTHVAQMQAYG-TNLVAGVNPGCGGQELHG----LPVFDLVEEVIE 60 Query: 68 RTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + + ++I V P DA +E+I + I I+ IT G+P LDMV++ + E + +IG Sbjct: 61 QFGVIDTTIICVDPYDVLDAALEAIASHISQIIIITAGVPPLDMVQLLRKAEACETLVIG 120 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN PGI+ P +G P + G VGI+SRS TLTYE ++ ++ GLGQS +V IG D Sbjct: 121 PNSPGIIVPGKILLGTQPSEFYTPGVVGIVSRSSTLTYEVAYELTKAGLGQSISVSIGSD 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + G+ F+ L++ DE TE+IV+VG+ GG +EE AA+++ + KP++ ++AG+ Sbjct: 181 AIVGSSFLQWLQILDEDETTEAIVLVGQPGGGSEEAAARYIAE----AIDKPVIAYIAGR 236 Query: 247 TAPPGRTMGHAGAVIS-----GGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 APPG++ G + + G A+ K+ A+KEA + +A P++I L Sbjct: 237 QAPPGKSWRQTGTLATVIGRDPNFGTAQSKLAALKEAEVPVAERPSQIPELL 288 >gi|213029163|ref|ZP_03343610.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 151 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 91/155 (58%), Positives = 116/155 (74%), Gaps = 4/155 (2%) Query: 143 MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA 202 MPG I + G VGI+SRSGTLTYEAV QT+ G GQST VGIGGDP+ G+ FID+L+LF Sbjct: 1 MPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILKLFQE 60 Query: 203 DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 D TE+IVM+GEIGGSAEEEAA ++KD KP+VG++AG TAP G+ MGHAGA+I+ Sbjct: 61 DPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVVGYIAGVTAPKGKRMGHAGAIIA 116 Query: 263 GGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 117 GGKGTADEKFAALEAAGVKTVRSLADIGEALKAII 151 >gi|238578335|ref|XP_002388685.1| hypothetical protein MPER_12266 [Moniliophthora perniciosa FA553] gi|215450185|gb|EEB89615.1| hypothetical protein MPER_12266 [Moniliophthora perniciosa FA553] Length = 169 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 97/169 (57%), Positives = 127/169 (75%), Gaps = 1/169 (0%) Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSR 123 A T +A+++YVPP A DAIIE+IE EI LIVC+TEGIP D +RV L+ +S SR Sbjct: 1 AVRETQPDATILYVPPPTAADAIIEAIENEIGLIVCVTEGIPQADEIRVMHALKSQSKSR 60 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPNCPG++ P+ CK+GI PG I + G +GI+SRSGTLTYEAV QT+ GLGQS +GI Sbjct: 61 LVGPNCPGVINPEGCKMGIQPGHIHKPGKIGIVSRSGTLTYEAVAQTTGVGLGQSLCLGI 120 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GGDP GT+ +D +++FL D TE IV++GEIGG+ EEEAA++L+ K Sbjct: 121 GGDPFPGTQHVDGIKVFLEDPKTEGIVIIGEIGGTMEEEAAEYLEKYNK 169 >gi|284052712|ref|ZP_06382922.1| succinyl-CoA synthetase alpha chain [Arthrospira platensis str. Paraca] gi|291567702|dbj|BAI89974.1| succinyl-CoA synthetase alpha chain [Arthrospira platensis NIES-39] Length = 301 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 105/299 (35%), Positives = 167/299 (55%), Gaps = 19/299 (6%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV--NVPVFTTVAEA 65 ++KV++QGL + + T +V + +G G + +PV+ V +A Sbjct: 6 DSKVIIQGLRDSDPSLKVALNMKAYSTNIVACVSAGRG------GEIIHQIPVYDLVEQA 59 Query: 66 KERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 + + SVI V P DA +E+I+A I +V +TEG+P LDMVR+ + E + + + Sbjct: 60 QAAVGPVDTSVILVHPYDVLDAALEAIDAGIRQLVIVTEGMPPLDMVRLVRKAEATETLV 119 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPNCPGI+ P +G P + GS+G++SRS TLTYE + LGQS +V IG Sbjct: 120 VGPNCPGIIVPGKLLLGTHPPQFYTPGSIGLISRSSTLTYEVAQALTDAKLGQSLSVCIG 179 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 D + G+ FI L++ D+ T++IV+VGEIGGS+EEEAA ++ + KP+V ++ Sbjct: 180 SDLIVGSSFIQWLQILDEDDHTDAIVLVGEIGGSSEEEAASYIAETI----DKPVVAYIT 235 Query: 245 GKTAPPGRTMGHAGAVISG------GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G AP + + HA +I+ G A+ KI+ ++A I +A SP++I L + L Sbjct: 236 GLHAPKAQLISHASTIITSKFTQDLHPGTAQSKISVFEKAKIPVASSPSQIPELLKKCL 294 >gi|282898787|ref|ZP_06306774.1| CoA-binding protein [Cylindrospermopsis raciborskii CS-505] gi|281196314|gb|EFA71224.1| CoA-binding protein [Cylindrospermopsis raciborskii CS-505] Length = 295 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 104/296 (35%), Positives = 159/296 (53%), Gaps = 14/296 (4%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 ++KVL+QG + T H +Q Y T +V G+ P G N+PVF V E Sbjct: 6 DSKVLIQGFSELISTTHIDQMKSYYGTNLVAGVDPGHGGIMAH----NLPVFDLVEEVVS 61 Query: 68 RTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + ++I V P DA +E+I A I I+ I+ G+P LDMV + + E ++G Sbjct: 62 SFGTIDTTIISVHPYQVLDAALEAIAANISQIIIISPGVPPLDMVTLLRKTENHEILIVG 121 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN PGI+ P +G P + G+VGI+SRS TLTYE ++ ++ GLGQS +V IG D Sbjct: 122 PNSPGIIVPGKILLGTQPSEFYTPGNVGIVSRSSTLTYEVAWELTKAGLGQSISVSIGSD 181 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + G+ F L++ DE TE+IV+VG+ GG +EE AA+++ KP+V ++AG+ Sbjct: 182 AIVGSSFSQWLQILDEDENTEAIVLVGQPGGESEEVAAKYI----STAIDKPVVAYIAGR 237 Query: 247 TAPPGRTMGHAGAVISGGK-----GGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 APP ++ +G + K G K++ A I +A P I + LV+ + Sbjct: 238 HAPPSKSWHQSGNFATVVKRDPDFGSVSTKLSTFSNAQIPVAQYPQEIPQLLVKAM 293 >gi|225679646|gb|EEH17930.1| succinyl-CoA synthetase beta chain [Paracoccidioides brasiliensis Pb03] Length = 694 Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 125/302 (41%), Positives = 187/302 (61%), Gaps = 15/302 (4%) Query: 8 NTKVLVQGL------TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +T+VL QG TGK T + ++++ + T+++GG+ P G ++ +PVF + Sbjct: 53 HTRVLFQGFTAKIYVTGKQATANVKESLAW-GTKIIGGVKPG-----VEGEHLGLPVFPS 106 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A++ + +A+ IYVP AI E+IEAEIPLIV + E +P+ D+VRV A L+ +S Sbjct: 107 VKVAQQISRPDATAIYVPGPQTAQAIEEAIEAEIPLIVAVAEHVPIHDIVRVHAMLKTQS 166 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SRL+G NCPGI++ C+IG P F G +GI+++SGTL YE V TS+ GLGQS Sbjct: 167 KSRLVGANCPGIISAIGKCRIGFQPLPCFSPGHIGIVAKSGTLGYETVASTSRAGLGQSL 226 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKP 238 +G+GGD + GT+F+D L +F D+ T I++VGEIGG+AE AA+++ +R KP Sbjct: 227 CIGMGGDVLAGTDFVDALSIFEHDDDTHGIIIVGEIGGTAEIAAAEWIAHYRRRSANPKP 286 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I+ + G AP GR MGHAGA + G+ A+ KI A++ AG + P G + LL Sbjct: 287 IMAVICGIHAPLGRVMGHAGAWVGPGEPDAQTKIKALQNAGAVMVHHPEDFGEGMKMLLS 346 Query: 299 SL 300 ++ Sbjct: 347 NM 348 >gi|325290301|ref|YP_004266482.1| Succinate--CoA ligase (ADP-forming) [Syntrophobotulus glycolicus DSM 8271] gi|324965702|gb|ADY56481.1| Succinate--CoA ligase (ADP-forming) [Syntrophobotulus glycolicus DSM 8271] Length = 297 Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 110/304 (36%), Positives = 173/304 (56%), Gaps = 15/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M IL++KNTKV++QG+TG+ G+ T+ Y T+V+GG P K G +PV+ Sbjct: 1 MGILINKNTKVIIQGITGREGSVRTKYMKDYG-TKVIGGTSPGKKGEEVHG----IPVYN 55 Query: 61 TVAE-AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV E +++ + SV++VP SG A+ E+++A + ++ EG PV D++ + A +++ Sbjct: 56 TVKEIVRDQGEIDFSVVFVPGSGLKTAVFEAVDAGVKNVIPCVEGTPVHDIMEMVAYVKQ 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSI------FRKGSVGILSRSGTLTYEAVFQTSQE 173 +RL+GP GI+TP +G + G++ F+ G++G+ SRSG + + + Sbjct: 116 KGARLVGPGSIGIITPGEAVVGWLGGNVDWANKFFQSGNIGVFSRSGGQSGTIPWVLREG 175 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G G ST V G +PV GT D+L LF AD TE + + EIGGS EEE A+ + A Sbjct: 176 GFGVSTVVHTGTEPVLGTSMADLLPLFEADPQTEGVAVYAEIGGSQEEECAEVI---AAG 232 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP V +VAG AP G+ HA ++ G+G A+ K+ A+ AG +A +P I + L Sbjct: 233 KFTKPFVIYVAGAWAPEGQRFSHASNIVERGRGSAKSKMEAVTAAGGFVADTPTDIPKIL 292 Query: 294 VELL 297 + L Sbjct: 293 KQKL 296 >gi|85111717|ref|XP_964070.1| hypothetical protein NCU09810 [Neurospora crassa OR74A] gi|28925833|gb|EAA34834.1| hypothetical protein NCU09810 [Neurospora crassa OR74A] Length = 646 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 105/263 (39%), Positives = 155/263 (58%), Gaps = 33/263 (12%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 T++VGG+ P + TG ++ +PV +V +A E +A+ IYV A AI E+IEA Sbjct: 42 TKIVGGVIPGR-----TGEHLGLPVLPSVRQAMEYLKPDATGIYVAAHQAPGAIEEAIEA 96 Query: 94 EIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKG 151 E+PLIV + E IPV DM+R+ + L+ +S SRL+GPN PGI++ C++ Sbjct: 97 EVPLIVAVAEHIPVHDMLRIHSMLKTQSKSRLVGPNSPGIISAVGKCRV----------- 145 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 AV T++ GLGQS +G+GGD V GT+ ++ L + D TE+I + Sbjct: 146 --------------AVASTTRAGLGQSLCIGVGGDMVPGTDMVEALSVLEKDPDTEAIAL 191 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRK-KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 +GEIGG E EAA ++K+ R + KPI+G +AG PGR +GHAGA G+ A+ Sbjct: 192 IGEIGGMGELEAAAWIKEYYSRSKSPKPIIGLIAGVNEAPGRILGHAGAFTFLGEPTAKA 251 Query: 271 KINAMKEAGICIAPSPARIGRSL 293 KI A++EAG+ + PA+IG +L Sbjct: 252 KIAALEEAGVILVNHPAKIGDTL 274 >gi|317485056|ref|ZP_07943938.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6] gi|316923591|gb|EFV44795.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6] Length = 298 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 115/306 (37%), Positives = 174/306 (56%), Gaps = 19/306 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHP-KKGSTYWTGGNVN-VPV 58 M IL++KNTKV+VQG+TG+ G+ T+ Y T VVGG P KKGS +V+ VPV Sbjct: 1 MGILINKNTKVVVQGITGREGSVRTKYMKSY-GTHVVGGTSPGKKGS------DVHGVPV 53 Query: 59 FTTVAE-AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + TV E A+E + SVI+VP A++E+ +A + ++ EG P+ D++ + A Sbjct: 54 YNTVKEIAREHGEIDFSVIFVPGHVLKTAVMEAADAGVKNVIPCVEGTPIHDIMEMIAYC 113 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSI------FRKGSVGILSRSGTLTYEAVFQTS 171 + +RL+GP GI+TP +G + G++ F++GS+G+ SRSG + + Sbjct: 114 KAKGTRLLGPGSIGIITPGEAVVGWLGGNVEWANTFFKRGSIGVFSRSGGQSGTIPWVLR 173 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + G G ST + G +PV GT D+L LF D TE + + EIGGS EEE A+ + A Sbjct: 174 EGGFGVSTVIHTGTEPVLGTSMADLLPLFEEDPETEGVAVYAEIGGSQEEECAEVI---A 230 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 KP V +V+G AP G+ HA ++ G+G A+ K++A+ +AG +A +P I Sbjct: 231 SGKFTKPFVVYVSGAWAPEGQRFSHASNIVERGRGSAKSKMDAITKAGGYVAMTPTDIPV 290 Query: 292 SLVELL 297 L E L Sbjct: 291 ILHEKL 296 >gi|209524799|ref|ZP_03273345.1| CoA-binding domain protein [Arthrospira maxima CS-328] gi|209494678|gb|EDZ94987.1| CoA-binding domain protein [Arthrospira maxima CS-328] Length = 301 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 102/299 (34%), Positives = 164/299 (54%), Gaps = 19/299 (6%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV--NVPVFTTVAEA 65 ++KV++QGL + + T +V + +G G++ +P F V +A Sbjct: 6 DSKVIIQGLRDSEPSLKAALNMKAYSTNIVACVSAGRG------GDIIHEIPFFDLVEQA 59 Query: 66 KERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 + + SVI V P DA +E+I+A I +V +TEG+P LDMVR+ + E + + + Sbjct: 60 QAAVGPVDTSVILVHPYDVLDAALEAIDAGIRQLVIVTEGMPPLDMVRLVRKAEATETLV 119 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPNCPGI+ P +G P + GS+G++SRS TLTYE + LGQS +V IG Sbjct: 120 VGPNCPGIIVPGKLLLGTHPPQFYTPGSIGLISRSSTLTYEVAQALTDAKLGQSISVCIG 179 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 D + G+ FI L++ D+ T++IV+VGE+GGS+EEEAA ++ + KP+V ++ Sbjct: 180 SDLIVGSSFIQWLQILDEDDHTDAIVLVGEVGGSSEEEAASYIAETI----DKPVVAYIT 235 Query: 245 GKTAPPGRTMGHAGAVISG------GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G P + + HA +I+ G A+ KI+ ++A I +A SP + L + L Sbjct: 236 GLHTPKAQLISHASTIITSRFTQDLHPGTAQSKISVFEKAKIPVASSPYHLPELLKKCL 294 >gi|289616472|emb|CBI56787.1| unnamed protein product [Sordaria macrospora] Length = 625 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 106/267 (39%), Positives = 153/267 (57%), Gaps = 33/267 (12%) Query: 30 LYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE 89 L T++VGG+ P + TG ++ +PV +V +A E+ +A+ IYV A AI E Sbjct: 18 LAWGTKIVGGVTPGR-----TGEHIGLPVLPSVRQAMEQLKPDATAIYVAAHQAPGAIEE 72 Query: 90 SIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTP-DSCKIGIMPGSI 147 +IEAE+PLIV + E IPV DM+R+ + L+ +S SRL+GPN PGI++ C+I Sbjct: 73 AIEAEVPLIVAVAEHIPVHDMLRIHSILKTQSKSRLVGPNSPGIISAVGKCRI------- 125 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 AV T++ GLGQS +G+GGD GT+ ++ L + D TE Sbjct: 126 ------------------AVASTTRAGLGQSLCIGVGGDMAPGTDMVEALSVLEKDPDTE 167 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRK-KPIVGFVAGKTAPPGRTMGHAGAVISGGKG 266 +I ++GEIGG+ E EAA ++K+ R KPIVG +AG PG MGHAGA G+ Sbjct: 168 AIALIGEIGGTGELEAAAWIKEYYSRSESPKPIVGLIAGVNEAPGHIMGHAGAFTFLGEP 227 Query: 267 GAEDKINAMKEAGICIAPSPARIGRSL 293 A+ KI ++EAG+ + PA+IG L Sbjct: 228 TAKAKITELEEAGVTLVNHPAKIGDIL 254 >gi|238060994|ref|ZP_04605703.1| succinyl-CoA synthetase, alpha subunit [Micromonospora sp. ATCC 39149] gi|237882805|gb|EEP71633.1| succinyl-CoA synthetase, alpha subunit [Micromonospora sp. ATCC 39149] Length = 202 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 94/205 (45%), Positives = 130/205 (63%), Gaps = 5/205 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G+ HT + +L T VVGG +P+K +PVF Sbjct: 1 MAIWLTKDSKVIVQGMTGSEGSKHTRR-MLAAGTNVVGGTNPRKAGQSVDFDGTALPVFA 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 TVA+A T A+ +VI+VPP A+IE+I+AEIPL V ITEG+PV D A + Sbjct: 60 TVADAMAETGADVTVIFVPPQFTKAAVIEAIDAEIPLAVVITEGVPVHDTAAFWAYNVAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPGI +P + GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GERTRIIGPNCPGIASPGASNAGIIPADITGSGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLAD 203 T VGIGGDP+ GT ID L F AD Sbjct: 178 TCVGIGGDPIIGTTHIDALAAFEAD 202 >gi|83589267|ref|YP_429276.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Moorella thermoacetica ATCC 39073] gi|83572181|gb|ABC18733.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Moorella thermoacetica ATCC 39073] Length = 298 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 114/304 (37%), Positives = 167/304 (54%), Gaps = 15/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M IL+D+NT V+VQG+TG+ G+ Y T+VV G P KG G +PV+ Sbjct: 1 MGILIDRNTTVVVQGITGREGSLRAAYMKEY-GTKVVAGTSPGKGGQTVAG----IPVYH 55 Query: 61 TVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EA E + SVI+VP A+ E+ +A I IV E +P+ D++ + A + Sbjct: 56 TVKEAVAEHGPIDFSVIFVPGRALKVAVKEAADAGIKNIVPCVESVPIHDIMEMVAYCKM 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSI------FRKGSVGILSRSGTLTYEAVFQTSQE 173 +RLIGP GI+TP +G + G++ F+ G +G+ SRSG + + + Sbjct: 116 KGTRLIGPGSIGIITPGEAVVGWLGGNVEWANTFFKPGPIGVFSRSGGQSGTIPWVLKEG 175 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G G ST V G +PV GT D+L LF AD T+ + + EIGGS EEE A+ + A Sbjct: 176 GFGVSTVVHTGTEPVLGTSMADLLPLFEADPQTKGVAVFSEIGGSQEEECAEVI---ASG 232 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP V +VAG AP G+ HA +++ G+G A+ K+ A+++AG +A SP I R L Sbjct: 233 KFTKPFVIYVAGAWAPEGQRFSHASSIVERGRGSAKSKMEAIRKAGGYVAMSPTDIPRIL 292 Query: 294 VELL 297 E++ Sbjct: 293 REVI 296 >gi|89894671|ref|YP_518158.1| hypothetical protein DSY1925 [Desulfitobacterium hafniense Y51] gi|219669111|ref|YP_002459546.1| CoA-binding protein [Desulfitobacterium hafniense DCB-2] gi|89334119|dbj|BAE83714.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539371|gb|ACL21110.1| CoA-binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 298 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 114/306 (37%), Positives = 167/306 (54%), Gaps = 17/306 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN-VPVF 59 M IL++K TKV+VQG+TG+ G+ T+ Y T ++GG P K G V+ VPVF Sbjct: 1 MGILINKETKVVVQGITGREGSVRTKYMKDYG-TNLIGGTSPGK-----MGQEVHGVPVF 54 Query: 60 TTVAE-AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 TV E +E+ + SVI+VP S A++E+ +A + I+ EG P+ D++ + A + Sbjct: 55 NTVKEIVREQGDIDFSVIFVPGSALKTAVMEAADAGVKNIIPCVEGTPIHDIMEMIAYAK 114 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSI------FRKGSVGILSRSGTLTYEAVFQTSQ 172 SRLIGP GILTP +G + G++ F+KG +G+ SRSG + + + Sbjct: 115 GKGSRLIGPGSIGILTPGEAVVGWLGGNVEWANKFFQKGHIGVFSRSGGQSGTIPWVLRE 174 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G G ST + G +PV GT D+L F D T + + EIGG+ EEE A+ + A Sbjct: 175 GGFGVSTVIHTGTEPVLGTSMADLLPFFEEDPDTHGVAVYAEIGGTQEEECAEVI---AA 231 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KP V +VAG AP G+ HA ++ G+G A+ K+ A+ +AG +A P I Sbjct: 232 GKFTKPFVIYVAGAWAPEGQRFSHASNIVERGRGSAKSKMEAITKAGGFVAERPTDIPLI 291 Query: 293 LVELLG 298 L E LG Sbjct: 292 LKEKLG 297 >gi|17231405|ref|NP_487953.1| succinyl-CoA synthetase alpha chain [Nostoc sp. PCC 7120] gi|17133047|dbj|BAB75612.1| succinyl-CoA synthetase alpha chain [Nostoc sp. PCC 7120] Length = 293 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 103/292 (35%), Positives = 160/292 (54%), Gaps = 15/292 (5%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK- 66 ++KV++QG H Q Y T +V G+ P G ++PVF V E Sbjct: 6 DSKVIIQGFHEFISENHIAQMKAYG-TNLVAGVQPGYGGQEL----YHLPVFDLVEEVVG 60 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + + + ++I V P DA +E+I + I I+ I+ G+P LDMV + + E + ++G Sbjct: 61 QFGSIDTTIICVHPYQVLDAALEAIASHIRQIIIISAGVPPLDMVELLRKAEAGETLVVG 120 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN PGI+ P +G P + G VGI+SRS TLTYE + +Q G GQS +V IG D Sbjct: 121 PNSPGIIVPGKILLGTQPSEFYTPGVVGIVSRSSTLTYEVARELTQAGWGQSISVSIGSD 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + G+ F+ L++ DE TE+IV+VG+ GG +EE AA+++ + KP++ ++AG+ Sbjct: 181 AIVGSSFLQWLQILDEDETTEAIVLVGQPGGGSEEAAARYIAE----AIDKPVIAYIAGR 236 Query: 247 TAPPGRTMGHAG--AVISG---GKGGAEDKINAMKEAGICIAPSPARIGRSL 293 APPG+T G A + G G A+ KI A + A + +A P+ I + L Sbjct: 237 QAPPGKTWRQTGTLATVVGRPPNFGTAQSKITAFEAAEVPVAERPSLIPQLL 288 >gi|75908005|ref|YP_322301.1| succinyl-CoA synthetase (ADP-forming)subunit alpha [Anabaena variabilis ATCC 29413] gi|75701730|gb|ABA21406.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Anabaena variabilis ATCC 29413] Length = 293 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 103/292 (35%), Positives = 160/292 (54%), Gaps = 15/292 (5%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK- 66 ++KV++QG H Q Y T +V G+ P G ++PVF V E Sbjct: 6 DSKVIIQGFHEFISENHIAQMKAYG-TNLVAGVQPGYGGQEL----YHLPVFDLVEEVVG 60 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + + + ++I V P DA +E+I + I I+ I+ G+P LDMV + + E + ++G Sbjct: 61 QFGSIDTTIICVHPYQVLDAALEAIASHIRQIIIISAGVPPLDMVELLRKAEAGETLVVG 120 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN PGI+ P +G P + G VGI+SRS TLTYE + +Q G GQS +V IG D Sbjct: 121 PNSPGIIVPGKILLGTQPSEFYTPGVVGIVSRSSTLTYEVARELTQAGWGQSISVSIGSD 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + G+ F+ L++ DE TE+IV+VG+ GG +EE AA+++ + KP++ ++AG+ Sbjct: 181 AIVGSSFLQWLQILDEDETTEAIVLVGQPGGGSEEAAARYITE----AIDKPVIAYIAGR 236 Query: 247 TAPPGRTMGHAG--AVISG---GKGGAEDKINAMKEAGICIAPSPARIGRSL 293 APPG+T G A + G G A+ KI A + A + +A P+ I + L Sbjct: 237 QAPPGKTWRQTGTLATVVGRPPNFGTAQSKITAFEAAEVPVAERPSLIPQLL 288 >gi|119510292|ref|ZP_01629428.1| CoA-binding [Nodularia spumigena CCY9414] gi|119465036|gb|EAW45937.1| CoA-binding [Nodularia spumigena CCY9414] Length = 299 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 98/288 (34%), Positives = 161/288 (55%), Gaps = 15/288 (5%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 ++KVL+QG + H Q Y T +V G++P G N+P+F V E Sbjct: 6 DSKVLIQGFSEFISATHIAQMKAYG-TNLVAGVNPGCGGQKLH----NLPIFDLVEEVVA 60 Query: 68 RTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + A + ++I V P DA +E+I I I+ IT G+P LDMV++ + E + ++G Sbjct: 61 KFGAIDTAIICVHPYQVLDAALEAIACNINQIIIITGGVPPLDMVQLLRKAETGETLIVG 120 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P PGI+ P +G P ++ G+VGI+SRS TLTYE ++ ++ GLGQS +V IG D Sbjct: 121 PYSPGIIVPGKILLGTQPSELYTPGTVGIVSRSSTLTYEVAWELTKAGLGQSISVSIGSD 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + G+ F+ L++ D+ T++IV+VG+ GG +EE AA+++ + KP++ ++AG+ Sbjct: 181 AIVGSSFLQWLQILDEDDTTQAIVLVGQPGGDSEEAAARYIIE----AIDKPVIAYIAGR 236 Query: 247 TAPPGRTMGHAGAVIS-----GGKGGAEDKINAMKEAGICIAPSPARI 289 AP + +G + + G A+ K+ A KEA + +A P+ I Sbjct: 237 HAPRAKNWRQSGTLATVIGRDPNFGTAQSKLAAFKEAKVPVAERPSLI 284 >gi|298490423|ref|YP_003720600.1| CoA-binding domain-containing protein ['Nostoc azollae' 0708] gi|298232341|gb|ADI63477.1| CoA-binding domain protein ['Nostoc azollae' 0708] Length = 295 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 164/298 (55%), Gaps = 15/298 (5%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 ++++L+QG + H Q Y T ++ G+ P G ++PVF V EA Sbjct: 6 DSRILIQGFSEFISATHIAQMKAYG-TNLIAGVQPGCGGQM----KYDLPVFDLVEEAIS 60 Query: 68 RTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + A + ++I V P DA +E+ + I I+ I+ G+P L MV + + E ++G Sbjct: 61 KLGAIDTTIICVHPYQVLDAALEASASNIRQIIIISPGVPPLHMVTLLRKTETREILVVG 120 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN PGI+ P +G P + GSVGI+SRS TLTYE ++ +Q GLGQS +V IG D Sbjct: 121 PNSPGIIVPGKILLGTQPSEFYTPGSVGIVSRSSTLTYEVAWELTQAGLGQSISVSIGSD 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + G+ F+ L++ DE T++IV+VG+ GG +EE AA+++ + KP++ ++AG+ Sbjct: 181 AIVGSSFLQWLQILDEDETTDAIVLVGQPGGGSEEAAARYIAE----AIDKPVIAYIAGR 236 Query: 247 TAPPGRTMGHAGAVISGGK-----GGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 AP + G + + + G ++K+ A + A + +A PA+I L +++G+ Sbjct: 237 HAPQSKYWHQTGNIATVVRRDPNFGTTQNKLAAFQAAQVPVAEYPAQIPEFLKKVMGN 294 >gi|154250058|ref|YP_001410883.1| CoA-binding domain-containing protein [Fervidobacterium nodosum Rt17-B1] gi|154153994|gb|ABS61226.1| CoA-binding domain protein [Fervidobacterium nodosum Rt17-B1] Length = 285 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 104/292 (35%), Positives = 166/292 (56%), Gaps = 19/292 (6%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 N KV V G+TG+ G++HT++ I Y T +V G+ K + + NV PV+ T+++ Sbjct: 5 NEKVCVYGITGRYGSYHTKKMIEY-GTDIVCGV--SKNNEFKEVHNV--PVYNTLSDYVS 59 Query: 68 R-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 R + ++ +VP +A +++ + V ITE +P+ D +R+ ++K++ ++G Sbjct: 60 RGFNVDTAIFFVPAPYVMEAFLDAFNNGVKKFVVITEHVPIHDALRMVDIVKKNNLTMVG 119 Query: 127 PNCPGIL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 PNCPG++ + + K+GIMP F++G V I+SRSGTL YE + + E G S +G+GG Sbjct: 120 PNCPGVIYSKEKVKLGIMPEKYFKEGEVAIISRSGTLMYE-IAKYIGESYGVSIGIGLGG 178 Query: 186 DPVKGTEFIDVLELF--LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP--IVG 241 DPV G ++VLE F +A E +V++GEIGG E EA + KP IV Sbjct: 179 DPVIG---LNVLEAFKEVAKLGFEKVVLIGEIGGEDEITGVA----EAIKMGFKPSNIVS 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F AG+ AP G+ MGHAGA++ G G + K M+E G+ + P + + Sbjct: 232 FFAGRHAPEGKRMGHAGAIVEGEHGKIKYKEEKMREYGVRVVKFPWEVKNAF 283 >gi|281414577|ref|ZP_06246319.1| succinyl-CoA synthetase subunit alpha [Micrococcus luteus NCTC 2665] Length = 227 Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 113/230 (49%), Positives = 153/230 (66%), Gaps = 15/230 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT + +L T +VGG++ +K T + G V Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHT-RLMLKAGTNIVGGVNARKAGTTVSHEDKDGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV EA E+T A+ SV +VPP+ A DA IE+IEAEIPL+V ITEGIPV D + A Sbjct: 60 LPVFGTVKEAMEKTGADVSVAFVPPAFAKDAAIEAIEAEIPLLVVITEGIPVQDTAKFFA 119 Query: 116 RLE-------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + K +R+IGPNCPG++TP GI P +I G +G++S+SGTLTY+ ++ Sbjct: 120 LSQSKTGEDGKPKTRIIGPNCPGVITPGEALAGITPATITGSGPIGLVSKSGTLTYQMMY 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGS 218 + G STA+GIGGDP+ GT ID LE F AD T++IVM+GEIGG Sbjct: 180 ELRD--FGFSTAIGIGGDPIIGTTHIDALEAFEADPDTQAIVMIGEIGGD 227 >gi|289705918|ref|ZP_06502296.1| succinate-CoA ligase, alpha subunit [Micrococcus luteus SK58] gi|289557364|gb|EFD50677.1| succinate-CoA ligase, alpha subunit [Micrococcus luteus SK58] Length = 218 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 104/212 (49%), Positives = 138/212 (65%), Gaps = 15/212 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT + +L T +VGG++ +K T + G V Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHT-RLMLKAGTNIVGGVNARKAGTTVSHEDKDGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV EA E+T A+ SV +VPP+ A DA IE+IEAEIPL+V ITEGIPV D A Sbjct: 60 LPVFGTVKEAMEKTGADVSVAFVPPAFAKDAAIEAIEAEIPLLVVITEGIPVQDSAEFFA 119 Query: 116 RLE-------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + K +R+IGPNCPGI+TP GI P +I G +G++S+SGTLTY+ ++ Sbjct: 120 LSQSKTGEDGKPKTRIIGPNCPGIITPGEALAGITPATITGTGPIGLVSKSGTLTYQMMY 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 + G STA+GIGGDPV GT ID LE F Sbjct: 180 ELRD--FGFSTAIGIGGDPVIGTTHIDALEAF 209 >gi|289608639|emb|CBI60557.1| unnamed protein product [Sordaria macrospora] Length = 252 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 84/131 (64%), Positives = 104/131 (79%), Gaps = 5/131 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+ QG+TG+ G+FHT+ A+ Y TQ+VGG+ P KG T ++ +PV+ Sbjct: 127 MSILVNKNTKVITQGMTGETGSFHTKAALEYG-TQMVGGVTPGKGGT----EHLGLPVYN 181 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK +T A+ASVIYVPP A D+I+E+I+AEIPLIV ITEGIPVLDMV+VK L S Sbjct: 182 TVAEAKSKTGADASVIYVPPPFAADSILEAIDAEIPLIVAITEGIPVLDMVKVKRALSGS 241 Query: 121 SSRLIGPNCPG 131 SRLIGPNCPG Sbjct: 242 KSRLIGPNCPG 252 >gi|282895775|ref|ZP_06303862.1| CoA-binding protein [Raphidiopsis brookii D9] gi|281199275|gb|EFA74141.1| CoA-binding protein [Raphidiopsis brookii D9] Length = 295 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 14/296 (4%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 ++KVL+QG + T H +Q Y T +V G+ P G N+PVF V E Sbjct: 6 DSKVLIQGFSELISTTHIDQMKSYYGTNLVAGVDPGHGGIM----AHNLPVFDLVEEVVS 61 Query: 68 RTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + ++I V P DA +E+I + I I+ I+ G+P LDMV + + E ++G Sbjct: 62 SFGTIDTTIISVHPYQVLDAALEAIASNISQIIIISAGVPPLDMVALLRKTENHEILIVG 121 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN PGI+ P +GI P + G+VGI+SRS TLTYE ++ ++ GLGQS +V IG D Sbjct: 122 PNSPGIIVPGKILLGIQPSEFYTPGNVGIVSRSSTLTYEVAWELTKSGLGQSISVSIGSD 181 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + G+ F L++ DE TE+IV+VG+ GG +EE AA+++ KP+V ++AG+ Sbjct: 182 AIVGSSFSQWLQILDEDENTEAIVLVGQPGGESEEVAAKYI----STAIDKPVVAYIAGR 237 Query: 247 TAPPGRTMGHAGAVISGGK-----GGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 APP ++ +G + K G K++ A I +A +I + L++ + Sbjct: 238 HAPPSKSWHQSGNFATVVKRDPDFGSVSSKLSTFSNAQIPVAEYTQQIPQLLIKAM 293 >gi|150021736|ref|YP_001307090.1| CoA-binding domain-containing protein [Thermosipho melanesiensis BI429] gi|149794257|gb|ABR31705.1| CoA-binding domain protein [Thermosipho melanesiensis BI429] Length = 280 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 103/281 (36%), Positives = 158/281 (56%), Gaps = 11/281 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 +++ +V VQG+TG+ G+FHT++ + Y T +V G+ K G +PV + Sbjct: 1 MINGTERVCVQGITGRYGSFHTKKMLKY-GTNIVCGVSKNKVVKELDG----IPVLNDMY 55 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 +A E+ + S+++VP A +AI E+I A I I+ ITE IP+ DM+ + ++++ Sbjct: 56 DAVEKYNCDTSIVFVPAKHAKNAIFEAINAGIKKIITITEHIPIHDMMEIYKLSKQNNVT 115 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 IGPNCPG++ P KIGIMP + F+ G + I+S+SGTL YE S++ G +G+ Sbjct: 116 FIGPNCPGVILPGISKIGIMPENAFKPGDIAIISKSGTLMYEISNLLSKKSTGIKIGIGL 175 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ-FLKDEAKRGRKKPIVGF 242 GGDP+ GT + LE F I+++ EIG + E + FL +G I F Sbjct: 176 GGDPIIGTSIEEALE-FSITLNPRKIIIISEIGSNDEVIGIEKFL----NKGYNANIQVF 230 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 AG+TAP G+ MGHAGA++ G K E K +K I +A Sbjct: 231 FAGRTAPRGKKMGHAGAIVDGIKSSIEYKEKRLKAIKIPVA 271 >gi|326474235|gb|EGD98244.1| succinyl-CoA synthetase subunit alpha [Trichophyton tonsurans CBS 112818] Length = 620 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 83/181 (45%), Positives = 118/181 (65%), Gaps = 2/181 (1%) Query: 119 KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +S SRL+GPNCPGI++ C+IG P F G++GI+++SGTL YE V T++ GLGQ Sbjct: 97 QSKSRLVGPNCPGIISAIGKCRIGFQPLPCFAPGNIGIVAKSGTLGYETVASTTRAGLGQ 156 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRK 236 S +G+ GD + GT+F+D L++F D+ T I+MVGEIGG AE EAA+++K +R Sbjct: 157 SLCIGMSGDVLAGTDFVDALKVFEHDDDTHGIIMVGEIGGEAEMEAAEWIKRYRRRTSEA 216 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KPI+ + G AP GR MGHAGA + G+ A KI A++ AG+ + P + G + L Sbjct: 217 KPIMALIGGIEAPHGRVMGHAGAWTATGEPDARTKIQALQSAGVVMVDHPEKFGEGMKVL 276 Query: 297 L 297 L Sbjct: 277 L 277 >gi|332266595|ref|XP_003282290.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial-like, partial [Nomascus leucogenys] Length = 199 Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 93/154 (60%), Positives = 112/154 (72%), Gaps = 6/154 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF T Sbjct: 49 HLYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNT 103 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR-LEKS 120 V EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK + L + Sbjct: 104 VKEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQG 163 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 +RLIGPNCPG++ P CKIGIMPG I +KG +G Sbjct: 164 KTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIG 197 >gi|221117973|ref|XP_002165321.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 201 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 93/154 (60%), Positives = 113/154 (73%), Gaps = 6/154 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++KNTKV+ QG TGK GTFH +QAI Y T++VGG+ P KG + G PVF + Sbjct: 29 NLSINKNTKVICQGFTGKQGTFHCQQAISY-GTKIVGGVSPNKGGSVHLGR----PVFNS 83 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EAKE T +ASVIYVPP GA AIIE+IEAE+ LIVCITEGIP DMV+VK LE+ S Sbjct: 84 VKEAKENTKCDASVIYVPPPGAAAAIIEAIEAEVGLIVCITEGIPQQDMVKVKHVLERQS 143 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 SRL+GPNCPGI+ P CKIGIMPG I + G +G Sbjct: 144 VSRLLGPNCPGIIKPGECKIGIMPGHIHKPGCIG 177 >gi|254410530|ref|ZP_05024309.1| CoA binding domain protein [Microcoleus chthonoplastes PCC 7420] gi|196182736|gb|EDX77721.1| CoA binding domain protein [Microcoleus chthonoplastes PCC 7420] Length = 291 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 94/288 (32%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 10 KVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEA-KER 68 K+LVQG+T G+++ + Y T +V G+ +G G +PVF V EA E Sbjct: 2 KILVQGITQPIGSYYAARMKAYG-TNLVAGVSAGQGGQTLHG----IPVFDLVEEALSEV 56 Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPN 128 +A+VI+ A DA +E+I+A + I+ +T GIP LDM+ + A+ + + ++GP+ Sbjct: 57 GYCDATVIFAESYSALDAALEAIDAGLSPIILVTGGIPPLDMIHLLAKAQARETLIVGPS 116 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 GI+ P +G + G++G++SR TLTYE +Q LGQS AV +G + + Sbjct: 117 SSGIIVPGKLLLGTQECEFYTPGTIGVISRVSTLTYEVALALTQAKLGQSIAVNLGSEAI 176 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 + F LE+ D+ TE+IV+V + GG +E+E A+F+ + +KP++ +VAG+ Sbjct: 177 IASSFRQWLEILAQDKRTEAIVLVDQTGGDSEDETAEFI----AQAIEKPVIAYVAGQYT 232 Query: 249 PPGRTMGHAGAVISGGKGG-------AEDKINAMKEAGICIAPSPARI 289 P + +G A+I+ G A+ K+ A K+ I +A P++I Sbjct: 233 PEDKQVGDTSAIIAAQLSGPIANTTTAQHKVAAFKQTNIPVAEYPSKI 280 >gi|145219674|ref|YP_001130383.1| ATP citrate lyase subunit 2 [Prosthecochloris vibrioformis DSM 265] gi|145205838|gb|ABP36881.1| ATP citrate lyase subunit 2 [Chlorobium phaeovibrioides DSM 265] Length = 610 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 105/302 (34%), Positives = 169/302 (55%), Gaps = 22/302 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQA-----ILYCQTQVVGGIHP----KKGSTYWTG 51 MSIL +K+T V++ G G AG ++ ++ V ++P ++ Y G Sbjct: 1 MSILANKDTNVVIIG--GVAGVNAAKRMAQFDFLVNRSLSVQAFVYPPESGQQKEIYRGG 58 Query: 52 GNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLD 109 N+ V+ ++ EA +E N ++IY+ S A + +E +E+E I L+ ITEG+P D Sbjct: 59 ELNNISVYASLKEALQENPQINTALIYLGASRAAQSAVECLESENIKLVSMITEGVPEKD 118 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGT 161 +++A K GP+ GI++ C++G++ G +++R GS G+L++SG Sbjct: 119 AKKLRAMAIKKGKMFNGPSSIGIMSAGECRLGVIGGEFKNLKLCNLYRAGSFGVLTKSGG 178 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 L+ E ++ +Q G G ++AV IGGD GT+F+ LE+F D T+++VMVGE+GG+ EE Sbjct: 179 LSNETMWLCAQNGNGVTSAVAIGGDSYPGTDFVTYLEMFEKDPETKAVVMVGEVGGTLEE 238 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVI-SGGKGGAEDKINAMKEAGI 280 EAA++L E +R R +G + P G GHAGA G G A KINA++EAG Sbjct: 239 EAAEWLGAEKRRIRLIAAIGGTCQEVLPQGMKFGHAGAKEGKKGLGSARSKINALREAGA 298 Query: 281 CI 282 + Sbjct: 299 LV 300 >gi|157364315|ref|YP_001471082.1| CoA-binding domain-containing protein [Thermotoga lettingae TMO] gi|157314919|gb|ABV34018.1| CoA-binding domain protein [Thermotoga lettingae TMO] Length = 278 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 97/292 (33%), Positives = 164/292 (56%), Gaps = 24/292 (8%) Query: 7 KNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 K+ +V V G+TGK G+ HT + Y T ++ G+ +K + + +PV+ T+ EAK Sbjct: 4 KSDRVCVYGITGKYGSHHTIKMKNY-GTNIICGVSKRKITEFE-----GIPVYKTLKEAK 57 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 E + ++I+VP +A ++++E I IV I+E +P+ D +++ +K +++G Sbjct: 58 EN--PDTAIIFVPKEEVLNAFLDAVENSIKKIVIISEHVPIHDALKITKISKKLGIKVVG 115 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNCPG++ P K+GIMP F+ G ++SRSGTL YE + + + G A+G+GGD Sbjct: 116 PNCPGVIVPGEVKVGIMPEKYFKPGEFALISRSGTLMYE-IARIISKADGIKIAMGLGGD 174 Query: 187 PVKGTEFIDVLELF--LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 PV GT +V E F + + + ++++GEIGG+ E ++ +++ G I F A Sbjct: 175 PVVGT---NVAEAFDEIENMSIRKVMVIGEIGGNDEVNGIKYAREKGFDGE---IFSFFA 228 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G+ AP G MGHAGA+I G G + K +++ + + R+L EL Sbjct: 229 GRYAPEGVRMGHAGAIIEGESGRVQYKEEKLRQYDV-------KTIRNLFEL 273 >gi|116180274|ref|XP_001219986.1| hypothetical protein CHGG_00765 [Chaetomium globosum CBS 148.51] gi|88185062|gb|EAQ92530.1| hypothetical protein CHGG_00765 [Chaetomium globosum CBS 148.51] Length = 636 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 107/263 (40%), Positives = 147/263 (55%), Gaps = 29/263 (11%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 T++VGG+ P + T ++ +PV TV A E+ +A+ IYV A AI E+IEA Sbjct: 39 TRIVGGVTPGR-----TAEHLGLPVLPTVRSAVEQLKPDATAIYVAAHQAAAAIEEAIEA 93 Query: 94 EIPLIVCITEGIPVLDMVRVKARLE---KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 E+PLIV + E IP+ DM+R K +S SRL+GPN PG P C F Sbjct: 94 EVPLIVAVAEHIPLHDMLRFKVHSMLKLQSKSRLVGPNSPG-FQPLPC---------FTP 143 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G VGI+++SGTL+YEAV T++ GLGQS +G+GGD V GT + L + D T++I Sbjct: 144 GRVGIVAKSGTLSYEAVASTTRAGLGQSLCIGVGGDIVPGTNLQEALSVLEHDPDTDAIA 203 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 ++GEIGG E + A + P+ VAG PGR MGHAGA + G+ A Sbjct: 204 LIGEIGGRGEFDVADW-----------PVAALVAGIAEEPGRIMGHAGAFTTVGEPNANA 252 Query: 271 KINAMKEAGICIAPSPARIGRSL 293 KI A++ AG + PA G +L Sbjct: 253 KITALESAGATVVGHPAEFGDAL 275 >gi|213418252|ref|ZP_03351318.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 132 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 81/134 (60%), Positives = 99/134 (73%), Gaps = 4/134 (2%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 TQ+VGG+ P KG T G +PVF TV EA E T A ASVIYVP D+I+E+I+A Sbjct: 3 TQMVGGVTPGKGGTTHLG----LPVFNTVREAVEATGATASVIYVPAPFCKDSILEAIDA 58 Query: 94 EIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSV 153 I LI+ ITEGIP LDM+ VK +L+++ R+IGPNCPG++TP CKIGIMPG I + G V Sbjct: 59 GIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIMPGHIHKPGKV 118 Query: 154 GILSRSGTLTYEAV 167 GI+SRSGTLTYEAV Sbjct: 119 GIVSRSGTLTYEAV 132 >gi|149370452|ref|ZP_01890141.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [unidentified eubacterium SCB49] gi|149356003|gb|EDM44560.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [unidentified eubacterium SCB49] Length = 147 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 76/150 (50%), Positives = 105/150 (70%), Gaps = 5/150 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG +++ PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIEY-GTNVVGGVTPGKGGQT----HLDKPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + A+ ++I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DM++ +E Sbjct: 56 TVAEAVKEVGADTTIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMIKAANYIENK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 RLIGPNCPG++TP K+GIMPG +F+K Sbjct: 116 ECRLIGPNCPGVITPGEAKVGIMPGFVFKK 145 >gi|148666585|gb|EDK99001.1| succinate-CoA ligase, GDP-forming, alpha subunit, isoform CRA_b [Mus musculus] Length = 149 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 80/134 (59%), Positives = 98/134 (73%), Gaps = 6/134 (4%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 I +DKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF T Sbjct: 20 HIYIDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQKHLG----LPVFNT 74 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS- 120 V EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DMVRVK RL + Sbjct: 75 VKEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQG 134 Query: 121 SSRLIGPNCPGILT 134 ++RLIGPNCPG++ Sbjct: 135 TTRLIGPNCPGVIN 148 >gi|194333912|ref|YP_002015772.1| ATP-citrate lyase/succinyl-CoA ligase [Prosthecochloris aestuarii DSM 271] gi|194311730|gb|ACF46125.1| ATP-citrate lyase/succinyl-CoA ligase [Prosthecochloris aestuarii DSM 271] Length = 610 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 107/309 (34%), Positives = 174/309 (56%), Gaps = 36/309 (11%) Query: 1 MSILVDKNTK-VLVQGLTG-----KAGTFH-------TEQAILYCQTQVVGGIHPKKGST 47 MSI+++K T+ V++ G G K F T QA +Y P++G Sbjct: 1 MSIVINKETRAVIIGGAAGLSAAKKMAEFDFLVKRPLTVQAFVY---------PPEEGQQ 51 Query: 48 --YWTGGNV-NVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCIT 102 + GG + NV V++ + +A +E N ++IY+ S A A +E++E++ I L+ IT Sbjct: 52 KEIFLGGELKNVKVYSALEKALEENPQINTALIYLGASRATQATMEALESKNIQLVSVIT 111 Query: 103 EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVG 154 EG+P D +++ EK L GP+ GI++ C++G++ G +++R GS G Sbjct: 112 EGVPEKDAKKLRIVAEKKGKTLNGPSSIGIMSAGQCRLGVIGGEFKNLKLCNLYRPGSFG 171 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++++SG L+ EA++ +Q G G ++AV IGGD GT+F++ LE+F D T+++VM+GE Sbjct: 172 VITKSGGLSNEAMWLCAQNGNGITSAVAIGGDAYPGTDFVNYLEMFDKDPETKAVVMIGE 231 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVI-SGGKGGAEDKIN 273 +GG+ EEEAA++L E + R +G + P G GHAGA G G A KIN Sbjct: 232 VGGTLEEEAAEWLGKEPRSIRLIAAIGGTCQEVLPQGMKFGHAGAKEGKKGTGSARSKIN 291 Query: 274 AMKEAGICI 282 A++EAG + Sbjct: 292 ALREAGAIV 300 >gi|289547974|ref|YP_003472962.1| succinate--CoA ligase (ADP-forming) [Thermocrinis albus DSM 14484] gi|289181591|gb|ADC88835.1| Succinate--CoA ligase (ADP-forming) [Thermocrinis albus DSM 14484] Length = 341 Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 105/288 (36%), Positives = 152/288 (52%), Gaps = 15/288 (5%) Query: 2 SILVDKNTKVLVQGLTGK-AGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 ++ ++ T++LV G+TG+ A TE LY VV G+ P KG + G PV+ Sbjct: 4 TVYLNDQTRILVMGITGREASQVVTESEALY-PGFVVAGVTPGKGGSQVAGK----PVYN 58 Query: 61 TVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EA + N ++YVPP+ DA+IE ++A I LI ITE +P+ D V ++ Sbjct: 59 TVREALQNHPEINTGLVYVPPTSVKDAVIELVDAGIKLIYIITEHVPIRDTVYFYHYAKE 118 Query: 120 SSSRLIGPNCPGILTPD-SCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 ++GP G + P +IG + P + G + ILS+SG LT + G Sbjct: 119 RGVIIVGPTSLGCIVPRIPARIGAIGGKDPSIAYADGGLVILSKSGGLTTTTAEMFKRRG 178 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 G A+ +GGD + T F DVLE D + +++ GE+GGS EE+AAQ + K G Sbjct: 179 WGVYMALALGGDVISCTTFADVLEKIADDPNVKGVIIQGEVGGSYEEQAAQTILRLYKEG 238 Query: 235 R-KKPIVGFVAGKTAPP--GRTMGHAGAVISGGKGGAEDKINAMKEAG 279 + KP+ FVAG+ G + GHAGA++ GKG A DKI A E G Sbjct: 239 KWNKPVAAFVAGRFQEKLEGVSFGHAGAIVERGKGKATDKIRAFNEVG 286 >gi|288817522|ref|YP_003431869.1| citryl-CoA synthetase small subunit [Hydrogenobacter thermophilus TK-6] gi|46849517|dbj|BAD17846.1| citryl-CoA synthetase small subunit [Hydrogenobacter thermophilus] gi|288786921|dbj|BAI68668.1| citryl-CoA synthetase small subunit [Hydrogenobacter thermophilus TK-6] gi|308751125|gb|ADO44608.1| CoA-binding domain protein [Hydrogenobacter thermophilus TK-6] Length = 344 Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 104/286 (36%), Positives = 154/286 (53%), Gaps = 15/286 (5%) Query: 4 LVDKNTKVLVQGLTGK-AGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ++ +T+++V G+TG+ A E LY VV G+ P KG + G VPV+ TV Sbjct: 11 YLNDSTRIIVMGITGREASQVVAESEALY-PGFVVAGVTPGKGGSEVAG----VPVYNTV 65 Query: 63 AEAKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 EA+ER N ++YVPP+ DA+IE I+A I +I ITE +P+ D V ++ Sbjct: 66 REAQERHPEINTGIVYVPPASVKDAVIELIDAGIGVIFIITEHVPIRDTVYFYHYAKERG 125 Query: 122 SRLIGPNCPGILTPD-SCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + ++GP G + P +IG + P + G + ILS+SG LT + G G Sbjct: 126 TIIVGPTSLGCIIPKIPARIGAIGGKDPSVAYADGGLVILSKSGGLTTTTAEMFKRRGWG 185 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR- 235 A+ +GGD + T F D +E D + +++ GE+GGS EE+AA+ + K GR Sbjct: 186 VYMALALGGDVISCTTFADAIENLADDPNVKGVIIQGEVGGSYEEQAAETILRLWKEGRW 245 Query: 236 KKPIVGFVAGK--TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 KP+ FVAG+ + G + GHAGA++ GKG A DKI A E G Sbjct: 246 NKPVAAFVAGRFQESLEGVSFGHAGAIVERGKGKATDKIRAFNEVG 291 >gi|78186924|ref|YP_374967.1| citrate lyase, subunit 2 [Chlorobium luteolum DSM 273] gi|78166826|gb|ABB23924.1| ATP citrate lyase subunit 2 [Chlorobium luteolum DSM 273] Length = 610 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 105/320 (32%), Positives = 180/320 (56%), Gaps = 22/320 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQA-----ILYCQTQVVGGIHP-KKGST--YWTGG 52 MSI+ +K+T+V++ G G AG ++ ++ V ++P +KG + GG Sbjct: 1 MSIIANKDTRVVIIG--GVAGVNAAKRMAQFDFLINRPLSVQAFVYPPEKGQQKEIYRGG 58 Query: 53 NVN-VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLD 109 +N + V+ T+ EA +E N ++IY+ S A + E +E++ I L+ ITEG+P D Sbjct: 59 ELNNISVYATLQEALEENPQINTALIYLGASRAAQSARECLESKNIQLVSMITEGVPEKD 118 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGT 161 +++A KS GP+ GI++ C++G++ G +++R GS G+L++SG Sbjct: 119 AKKLRAMAIKSGKMFNGPSSIGIMSAGECRLGVIGGEYKNLKLCNLYRAGSFGVLTKSGG 178 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 L+ E ++ +Q G G ++AV IGGD GT+F+ LE+F D T+++VMVGE+GG+ EE Sbjct: 179 LSNETMWLCAQNGNGITSAVAIGGDSYPGTDFVTYLEMFENDPETKAVVMVGEVGGTLEE 238 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVI-SGGKGGAEDKINAMKEAGI 280 EAA++ + +R R +G + P G GHAGA G G A KIN+++EAG Sbjct: 239 EAAEWFGAKKRRIRLIAAIGGTCQEVLPQGMKFGHAGAKEGKKGLGSARSKINSLREAGA 298 Query: 281 CIAPSPARIGRSLVELLGSL 300 + + + +++ ++ L Sbjct: 299 LVPDTFGGLSKAIKQVYQEL 318 >gi|302036205|ref|YP_003796527.1| ATP citrate lyase subunit alpha [Candidatus Nitrospira defluvii] gi|300604269|emb|CBK40601.1| ATP citrate lyase, alpha subunit [Candidatus Nitrospira defluvii] Length = 606 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 100/320 (31%), Positives = 175/320 (54%), Gaps = 22/320 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQT-----QVVGGIHP----KKGSTYWTG 51 MSIL +K+T+V++QG G+AG + +C V ++P K + Sbjct: 1 MSILANKDTRVVIQG--GQAGVNAARRMAEFCYLIKRPLNVEAFVYPPDAGKSNEIPYGS 58 Query: 52 GNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLD 109 G + +PV+ ++AEA K N S++Y+ A +E+++ + I ++ ITEG+P D Sbjct: 59 GLIAIPVYKSIAEATKHHPTLNTSLVYIGADRAMKGGMEALDDSHIKVVSMITEGVPEKD 118 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGS--------IFRKGSVGILSRSGT 161 + A K GP+ GI++ +C++G++ G+ ++R+GS G++++SG Sbjct: 119 AKILGAHARKLGKVFNGPSSIGIISAGACRLGVIGGAFDNLVLSKLYREGSFGVITKSGG 178 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 L+ E ++ SQ G +TA+GIGGD GT+++ LE+F D T+++V+VGE+GG EE Sbjct: 179 LSNEIIWICSQFADGITTAIGIGGDAYPGTDYVSYLEMFENDPQTKAVVIVGEMGGDLEE 238 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS-GGKGGAEDKINAMKEAGI 280 AA++ + +R + +V ++ P G GHAGA G+G A K +A+K+AG Sbjct: 239 RAAEWYGAKKRRVKLIAVVSGFCQESLPKGMKFGHAGAKEGMKGEGSARSKSDALKKAGA 298 Query: 281 CIAPSPARIGRSLVELLGSL 300 + P+ +G ++ E L Sbjct: 299 LVPPTFGALGPAIKETYQDL 318 >gi|189346748|ref|YP_001943277.1| ATP-citrate lyase/succinyl-CoA ligase [Chlorobium limicola DSM 245] gi|189340895|gb|ACD90298.1| ATP-citrate lyase/succinyl-CoA ligase [Chlorobium limicola DSM 245] Length = 610 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 167/300 (55%), Gaps = 18/300 (6%) Query: 1 MSILVDKNTKV-LVQGLTGKAGTFHTEQAILYCQT--QVVGGIHP----KKGSTYWTGGN 53 MSIL +++T+V ++ G+ G Q V ++P ++ Y G Sbjct: 1 MSILANRDTQVVIIGGVAGLNAARRMAQFDFLINRPLSVQAFVYPPEEGQQKEIYRGGEL 60 Query: 54 VNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMV 111 NVPV++++ +A E N ++IY+ + A A E++EA I L+ ITEG+P D Sbjct: 61 KNVPVYSSLEDALAENPGINTALIYIGANRAYQAAKEALEASSIKLVSMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGTLT 163 R++ ++ GP+ GI++ C++G++ G +++R GS G++++SG L+ Sbjct: 121 RLRKLAIEAGKLFNGPSSIGIMSAGECRLGVIGGEFKNLKLCNLYRSGSFGVITKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 EA++ +Q G G +TAV IGGD GT+F+ LE+F D T+++V+VGE+GG+ E+EA Sbjct: 181 NEAMWLCAQNGNGITTAVAIGGDAYPGTDFVTYLEMFEKDPETKAVVIVGEVGGTLEDEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVI-SGGKGGAEDKINAMKEAGICI 282 A++L E +R R +G + P G GHAGA G G A K+NA+++AG + Sbjct: 241 AEWLAAEKRRIRLVATIGGTCQEVLPQGMKFGHAGAKEGKKGVGSARAKMNALRDAGALV 300 >gi|119357117|ref|YP_911761.1| ATP citrate lyase subunit 2 [Chlorobium phaeobacteroides DSM 266] gi|119354466|gb|ABL65337.1| ATP citrate lyase subunit 2 [Chlorobium phaeobacteroides DSM 266] Length = 610 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 168/300 (56%), Gaps = 18/300 (6%) Query: 1 MSILVDKNTK-VLVQGLTGKAGTFHTEQAILYCQT--QVVGGIHP----KKGSTYWTGGN 53 MSIL +K+T+ V++ G+ G Q V ++P ++ Y G Sbjct: 1 MSILANKDTRAVIIGGIAGLNAARRMAQFDFLVNRPLTVQAFVYPPEEGQQKEIYRGGEL 60 Query: 54 VNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMV 111 N+ V++++ +A +E N ++IY+ S A + E++E++ I L+ ITEG+P D Sbjct: 61 KNIAVYSSLEKALEEHPEINTALIYIGASRAFQSAKEALESKGIKLVSMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGTLT 163 R++ +++ GP+ GI++ C++G++ G +++R GS G++++SG L+ Sbjct: 121 RLRKLAAENNKLFNGPSSIGIMSAGECRLGVIGGEFKNLKLCNLYRPGSFGVITKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 EA++ +Q G G +TAV IGGD GT+F+ LE+F D T+++V+VGE+GG+ EEEA Sbjct: 181 NEAMWLCAQNGNGITTAVAIGGDSFPGTDFVTYLEMFENDPDTKAVVIVGEVGGTLEEEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVI-SGGKGGAEDKINAMKEAGICI 282 A +L E +R R +G + P G GHAGA G G A K+NA+++AG + Sbjct: 241 ADWLAAEKRRIRLIAAIGGTCQEVLPQGMKFGHAGAKEGKKGLGSARSKMNALRDAGALV 300 >gi|85857866|ref|YP_460068.1| succinyl-CoA synthetase subunit alpha [Syntrophus aciditrophicus SB] gi|85720957|gb|ABC75900.1| succinyl-CoA synthetase, alpha subunit [Syntrophus aciditrophicus SB] Length = 180 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 78/171 (45%), Positives = 109/171 (63%), Gaps = 4/171 (2%) Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 K++S G GIL P K+GIMP S+F G VGI+SRSGTL+YE S+ +GQS Sbjct: 4 KTASLPWGRQHRGILVPGKGKMGIMPASMFAPGRVGIISRSGTLSYEFAGILSENNVGQS 63 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VG+G DPV D+LELF DE T+++++VGE+GG EE+AA F+ KR KP Sbjct: 64 TVVGMGADPVVLRNLTDILELFEEDEGTDAVIVVGEVGGEQEEKAAGFI----KRRMTKP 119 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + ++AG+ +P G+ MGHAGA++ G G K A+++AG+ I SP + Sbjct: 120 VAAYIAGRYSPQGKRMGHAGAIVRGASGTVAGKQEALRDAGVTILDSPIHV 170 >gi|189500292|ref|YP_001959762.1| ATP-citrate lyase/succinyl-CoA ligase [Chlorobium phaeobacteroides BS1] gi|189495733|gb|ACE04281.1| ATP-citrate lyase/succinyl-CoA ligase [Chlorobium phaeobacteroides BS1] Length = 610 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 105/327 (32%), Positives = 181/327 (55%), Gaps = 36/327 (11%) Query: 1 MSILVDKNTK-VLVQGLTG-----KAGTFH-------TEQAILYCQTQVVGGIHPKKGST 47 MSI+++K T+ V++ G G K F T QA +Y P++G Sbjct: 1 MSIVINKETRAVIIGGAAGLSAARKMAEFDFLVKRPLTVQAFVY---------PPEEGQQ 51 Query: 48 --YWTGGNV-NVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCIT 102 + GG + NV V++T+ +A + N +++Y+ S A A E++E+E I L+ IT Sbjct: 52 KEIFLGGELKNVKVYSTLQKALADNPQINTALVYLGASRATQATQEALESEHISLVSVIT 111 Query: 103 EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVG 154 EG+P D +++ E + L GP+ GI++ C++G++ G +++R GS G Sbjct: 112 EGVPEKDAKKLRLLAENNGKVLNGPSSIGIMSAGECRLGVIGGEYKNLKLCNLYRPGSFG 171 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 +L++SG L+ EA++ +Q G G ++AV +GGD GT+F+ LE+F D T+++V++GE Sbjct: 172 VLTKSGGLSNEAMWLCAQNGDGITSAVAVGGDAYPGTDFVTYLEMFENDPDTKAVVIIGE 231 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVI-SGGKGGAEDKIN 273 +GGS EE+AA++L E +R R +G + P G GHAGA G G A K+N Sbjct: 232 VGGSLEEDAAEWLAAEKRRIRVVAAIGGTCQEVLPQGMKFGHAGAKEGKKGAGSARSKMN 291 Query: 274 AMKEAGICIAPSPARIGRSLVELLGSL 300 A+++AG + + + +++ ++ L Sbjct: 292 ALRDAGAVVPDTFGGLSKAIKQVYDEL 318 >gi|12621910|gb|AAB94002.2| succinyl-CoA synthetase [Sus scrofa] Length = 102 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 72/102 (70%), Positives = 83/102 (81%), Gaps = 1/102 (0%) Query: 91 IEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 I+AE+PL+VCITEGIP DMVRVK RL + +RLIGPNCPG++ P CKIGIMPG I + Sbjct: 1 IDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRLIGPNCPGVINPGECKIGIMPGHIHK 60 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 KG +GI+SRSGTLTYEAV QT+Q GLGQS VGIGGDP GT Sbjct: 61 KGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGT 102 >gi|302497886|ref|XP_003010942.1| succinyl-CoA synthetase beta subunit, putative [Arthroderma benhamiae CBS 112371] gi|291174488|gb|EFE30302.1| succinyl-CoA synthetase beta subunit, putative [Arthroderma benhamiae CBS 112371] Length = 510 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 85/181 (46%), Positives = 120/181 (66%), Gaps = 2/181 (1%) Query: 119 KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +S SRL+GPNCPGI++ C+IG P F G+VGI+++SGTL YE V T++ GLGQ Sbjct: 5 QSKSRLVGPNCPGIISAIGKCRIGFQPLPCFAPGNVGIVAKSGTLGYETVASTTRAGLGQ 64 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRK 236 S +G+GGD + GT+F+D L++F D+ T I++VGEIGG AE EAA+++K +R Sbjct: 65 SLCIGMGGDVLAGTDFVDALKVFEHDDDTHGIIIVGEIGGEAEMEAAEWIKGYRRRTSEA 124 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KPI+ + G APPGR MGHAGA + G+ A KI A++ AG+ + P + G + L Sbjct: 125 KPIMALIGGIEAPPGRVMGHAGAWTAEGEPDARTKIQALQSAGVIMVDHPEKFGEGMKAL 184 Query: 297 L 297 L Sbjct: 185 L 185 >gi|149036442|gb|EDL91060.1| succinate-CoA ligase, GDP-forming, alpha subunit, isoform CRA_c [Rattus norvegicus] Length = 129 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 71/107 (66%), Positives = 84/107 (78%), Gaps = 1/107 (0%) Query: 110 MVRVKARLEKS-SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 MVRVK +L + +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV Sbjct: 1 MVRVKHKLTRQGKTRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVH 60 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEI 215 QT+Q GLGQS +GIGGDP GT FID L++FL D ATE IV++G I Sbjct: 61 QTTQVGLGQSLCIGIGGDPFNGTNFIDCLDVFLKDPATEGIVLIGVI 107 >gi|110597563|ref|ZP_01385849.1| CoA-binding:ATP-citrate lyase/succinyl-CoA ligase [Chlorobium ferrooxidans DSM 13031] gi|110340882|gb|EAT59356.1| CoA-binding:ATP-citrate lyase/succinyl-CoA ligase [Chlorobium ferrooxidans DSM 13031] Length = 610 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 101/318 (31%), Positives = 174/318 (54%), Gaps = 18/318 (5%) Query: 1 MSILVDKNTK-VLVQGLTGKAGTFHTEQAILYCQT--QVVGGIHP----KKGSTYWTGGN 53 MSIL +K T+ V++ G+ G Q V ++P ++ Y G Sbjct: 1 MSILANKETRAVIIGGVAGLNAARRMAQFDFLINRPLTVQAFVYPPEEGQQKEIYRGGEL 60 Query: 54 VNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMV 111 NV V++++ +A +E N ++IY+ S A + E+++A+ I L+ ITEG+P D Sbjct: 61 NNVTVYSSLEQALEENPQINTALIYIGSSRAYQSAKEALDAKGIKLVSMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGTLT 163 R++ ++ GP+ GIL+ C++G++ G +++R GS G++++SG L+ Sbjct: 121 RLRKYALETGKIFNGPSSIGILSAGECRLGVIGGEYKNLKLCNLYRSGSFGVITKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 EA++ +Q G G +TAV IGGD GT+F+ LE+F D T+++V+VGE+GG+ EEEA Sbjct: 181 NEAMWLCAQNGNGVTTAVAIGGDSYPGTDFVTYLEMFENDPETKAVVIVGEVGGTLEEEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVI-SGGKGGAEDKINAMKEAGICI 282 A +L E +R + +G + P G GHAGA G G A K+NA+++AG + Sbjct: 241 ADWLGAEVRRIKVIAAIGGTCQEVLPQGMKFGHAGAKEGKKGLGSARSKMNALRDAGAVV 300 Query: 283 APSPARIGRSLVELLGSL 300 + + +++ ++ L Sbjct: 301 PDTFGGLSKAIKQVYQEL 318 >gi|15606916|ref|NP_214297.1| succinyl-CoA ligase alpha subunit [Aquifex aeolicus VF5] gi|2984152|gb|AAC07686.1| succinyl-CoA ligase alpha subunit [Aquifex aeolicus VF5] Length = 368 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 107/288 (37%), Positives = 149/288 (51%), Gaps = 17/288 (5%) Query: 4 LVDKNTKVLVQGLTGK-AGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ++ T+++V G+TG+ A TE LY VG + P KG T G VPVF TV Sbjct: 31 YLNDKTRIIVVGITGREASQVVTESEALYPGFIKVG-VTPGKGGTEVAG----VPVFNTV 85 Query: 63 AEA---KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 EA E N ++YVPP+ DA+IE I+A I LI +TE +P+ D V ++ Sbjct: 86 KEALSSPEGKDVNTGLVYVPPASVKDAVIELIDAGIKLIYIVTEHVPIRDTVYFYHYAKE 145 Query: 120 SSSRLIGPNCPGILTPD-SCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 ++GP G + P +IG + P + G + ILS+SG LT + G Sbjct: 146 RGVTIVGPTSLGCIVPRIPARIGAIGGKNPSIAYADGGLVILSKSGGLTTTTAEMFKRRG 205 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 G A+ +GGD + T F DVLE D + +V+ GE+GG+ EE+AA+ + K G Sbjct: 206 WGVYMALALGGDVISCTTFADVLEEIADDPNVKGVVIQGEVGGTYEEQAAETILRLYKEG 265 Query: 235 R-KKPIVGFVAGKTAPP--GRTMGHAGAVISGGKGGAEDKINAMKEAG 279 R KP+ FVAGK G + GHAGA++ GKG A DKI E G Sbjct: 266 RWNKPVAAFVAGKFQEKMEGVSFGHAGAIVERGKGKATDKIRMFNEVG 313 >gi|89892992|ref|YP_516479.1| hypothetical protein DSY0246 [Desulfitobacterium hafniense Y51] gi|89332440|dbj|BAE82035.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 188 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 79/187 (42%), Positives = 122/187 (65%), Gaps = 7/187 (3%) Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQT 170 K LEK + +IG N GI++ +G P +++ G VG+++RSG+LT E + Sbjct: 6 KIALEKQAM-VIGGNTTGIISTGKAMMGFFPYWLDRVYKPGRVGVMTRSGSLTNEVTAEI 64 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + G G S+ VG+GGDPV T F ++L LF D T+++VM+GEIGG+ EE+ A+ ++ Sbjct: 65 VKAGFGPSSIVGVGGDPVPLTRFAEILPLFEKDPDTDAVVMIGEIGGTMEEDVAEAIE-- 122 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 +R KP++GF+ G+TAP G+ MGHAGA+I+ GKG EDK+ A+ +AG +A P+ IG Sbjct: 123 -QRIFTKPLIGFMGGRTAPKGQKMGHAGAIITAGKGTVEDKVEALAKAGALVADRPSMIG 181 Query: 291 RSLVELL 297 + L ++L Sbjct: 182 QLLQKVL 188 >gi|194336479|ref|YP_002018273.1| ATP-citrate lyase/succinyl-CoA ligase [Pelodictyon phaeoclathratiforme BU-1] gi|194308956|gb|ACF43656.1| ATP-citrate lyase/succinyl-CoA ligase [Pelodictyon phaeoclathratiforme BU-1] Length = 610 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 165/300 (55%), Gaps = 18/300 (6%) Query: 1 MSILVDKNTK-VLVQGLTGKAGTFHTEQAILYCQT--QVVGGIHP----KKGSTYWTGGN 53 MSIL +K+T+ V++ G+ G Q V ++P ++ Y G Sbjct: 1 MSILANKDTRAVIIGGIAGLNAARRMAQFDFLINRPLTVQAFVYPPEEGQQKEIYRGGEL 60 Query: 54 VNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMV 111 NV V++++ +A +E N ++IY+ S A + E+++A+ I L+ ITEG+P D Sbjct: 61 NNVTVYSSLEKALEENPQINTALIYIGASRAYQSAKEALDAKGIKLVTMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGTLT 163 R++ S GP+ GI++ C++G++ G +++R GS G++++SG L+ Sbjct: 121 RLRKHAIDSGKIFNGPSSIGIMSAGECRLGVIGGEFKNLKLCNLYRPGSFGVITKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 EA++ +Q G G ++AV IGGD GT+F+ L +F D T+++V++GE+GG+ EEEA Sbjct: 181 NEAMWLCAQNGNGITSAVAIGGDSYPGTDFVTYLNMFENDPDTKAVVIIGEVGGTLEEEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVI-SGGKGGAEDKINAMKEAGICI 282 A++L E +R + +G P G GHAGA G G A KINA++EAG + Sbjct: 241 AEWLGKEIRRIKLIASIGGTCQDVLPQGMKFGHAGAKEGKKGLGSARSKINALREAGAVV 300 >gi|196232110|ref|ZP_03130965.1| Succinate--CoA ligase (GDP-forming) [Chthoniobacter flavus Ellin428] gi|196223832|gb|EDY18347.1| Succinate--CoA ligase (GDP-forming) [Chthoniobacter flavus Ellin428] Length = 130 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 73/132 (55%), Positives = 95/132 (71%), Gaps = 4/132 (3%) Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 ++Q + G GQST VGIGGDPV GT +DVL++F D TE+I+M+GEIGG EEEAA + Sbjct: 1 MWQLTTRGYGQSTCVGIGGDPVNGTSHLDVLKMFNDDPETEAIIMIGEIGGDKEEEAAVW 60 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 KD KKPI F+AG TAPPGR MGHAGA++SGGKG A+ KI A+K AGI +A +P Sbjct: 61 AKDHV----KKPIAAFIAGATAPPGRRMGHAGAIVSGGKGTAQGKIEALKAAGIAVAQTP 116 Query: 287 ARIGRSLVELLG 298 + + +L++ G Sbjct: 117 SVMAETLLKHWG 128 >gi|195953639|ref|YP_002121929.1| CoA-binding domain protein [Hydrogenobaculum sp. Y04AAS1] gi|195933251|gb|ACG57951.1| CoA-binding domain protein [Hydrogenobaculum sp. Y04AAS1] Length = 329 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 153/289 (52%), Gaps = 17/289 (5%) Query: 2 SILVDKNTKVLVQGLTGK-AGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV-NVPVF 59 ++ +++NT+ +V G+TG+ A TE LY + G+ P KG G +V NVPV+ Sbjct: 4 TVYLNENTRFVVIGITGREASQVVTETEALYPGF-IKAGVTPGKG-----GASVANVPVY 57 Query: 60 TTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 TV EAK NA +IYVPP DA+IE + I LI ITE +P+ D + Sbjct: 58 NTVKEAKTHHPEINAGLIYVPPVSVKDAVIELVNNGIKLIYIITEHVPIRDTAYFYNYAK 117 Query: 119 KSSSRLIGPNCPGILTPD-SCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + ++GP G + P ++G + P ++ G + ILS+SG LT + Sbjct: 118 ERGVIIVGPTSLGAIVPSVPMRVGAIGGKDPSIAYKPGGLVILSKSGGLTTTTAEMMMRR 177 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G G TA+ +GGD + T F DV+ D ++IV+ GE+GG+ EE AA + + K+ Sbjct: 178 GWGVYTAIALGGDVISCTTFEDVIRNIHNDPNVKAIVIQGEVGGTYEENAAMAILELYKQ 237 Query: 234 GR-KKPIVGFVAGKTAP--PGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 G+ KKP+ FVAG+ G + GHAGA++ GKG A KI E G Sbjct: 238 GKWKKPVAAFVAGRFQENLEGVSFGHAGAIVERGKGKASTKIKLFNEVG 286 >gi|163782521|ref|ZP_02177518.1| succinyl-CoA ligase alpha subunit [Hydrogenivirga sp. 128-5-R1-1] gi|159882094|gb|EDP75601.1| succinyl-CoA ligase alpha subunit [Hydrogenivirga sp. 128-5-R1-1] Length = 347 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 104/288 (36%), Positives = 151/288 (52%), Gaps = 17/288 (5%) Query: 4 LVDKNTKVLVQGLTGK-AGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ++ T+V+V G+TG+ A +E LY T VG + P KG +G VPVF TV Sbjct: 11 YLNDKTRVIVIGITGREASQVVSETEALYPGTIKVG-VTPGKGGQEVSG----VPVFNTV 65 Query: 63 AEA---KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 EA E N +IYVPP+ DA+IE ++A I +I ITE +P+ D V ++ Sbjct: 66 KEALNSPEGRDVNTGLIYVPPASVKDAVIELVDAGISVIYIITEHVPIRDTVYFYHYAKE 125 Query: 120 SSSRLIGPNCPGILTPD-SCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 ++GP G + P +IG + P +R G + ILS+SG LT + G Sbjct: 126 RGVTIVGPTSLGCIVPRVPARIGAIGGKNPSIAYRDGGLVILSKSGGLTTTTAEMFMRRG 185 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 G A+ +GGD + T F DVLE D + +++ GE+GG+ EE+AA+ ++ K G Sbjct: 186 WGVYMALALGGDIIACTTFADVLEEIKDDPNVKGVIIQGEVGGTYEEQAAETIRRLYKEG 245 Query: 235 RKK-PIVGFVAGKTAP--PGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 + P+ FVAG+ G + GHAGA++ GKG A DKI E G Sbjct: 246 KWNIPVAAFVAGRFQEGLEGVSFGHAGAIVERGKGKATDKIRLFNEVG 293 >gi|78188768|ref|YP_379106.1| citrate lyase, subunit 2 [Chlorobium chlorochromatii CaD3] gi|78170967|gb|ABB28063.1| ATP citrate lyase subunit 2 [Chlorobium chlorochromatii CaD3] Length = 610 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 160/300 (53%), Gaps = 18/300 (6%) Query: 1 MSILVDKNTK-VLVQGLTGKAGTFHTEQAILYCQT--QVVGGIHP----KKGSTYWTGGN 53 MSI+ +++T+ V++ G+ G Q V ++P ++ Y G Sbjct: 1 MSIVANRDTRAVIIGGVAGVNAAKRMAQFDFLVNRPLTVQAFVYPPEEGQQKEIYRGGEL 60 Query: 54 VNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMV 111 NV V+ T+ +A E N ++IY+ S A A E + A I L+ ITEG+P D Sbjct: 61 NNVTVYATIEKALAENPEINTALIYLGASRATQAAKECLTASNIKLVTMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGTLT 163 ++ L GP+ GI++ C++G++ G +++R+GS G++++SG L+ Sbjct: 121 ILRKMANDQGKMLNGPSSIGIMSAGECRLGVIGGEFKNLKLCNLYRQGSFGVITKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E ++ +Q G G ++AV IGGD GT+F+ L++F D AT+++VMVGE+GG+ EEEA Sbjct: 181 NETMWLCAQNGDGVTSAVAIGGDAYPGTDFVTYLQMFENDPATKAVVMVGEVGGTLEEEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVI-SGGKGGAEDKINAMKEAGICI 282 A++ E +R R +G + P G GHAGA G G A KINA++E G + Sbjct: 241 AEWYGREKRRIRLIASIGGTCQEVLPQGMKFGHAGAKEGKKGLGSARSKINALREVGAVV 300 >gi|332239320|ref|XP_003268852.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial-like [Nomascus leucogenys] Length = 156 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 89/142 (62%), Positives = 115/142 (80%) Query: 154 GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVG 213 GI+SRSGTLTYEAV QT+Q GLGQS VGIGGDP GT+FID LE+FL D ATE I+++G Sbjct: 7 GIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTDFIDCLEIFLNDSATEGIILIG 66 Query: 214 EIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN 273 EIGG+AEE AA+FLK KP+V F+AG TAPPGR MGHAGA+I+GGKGGA++KI+ Sbjct: 67 EIGGNAEENAAEFLKQHNSGPNSKPVVSFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIS 126 Query: 274 AMKEAGICIAPSPARIGRSLVE 295 A++ AG+ ++ SPA++G ++ + Sbjct: 127 ALQSAGVVVSMSPAQLGTTIYK 148 >gi|156053373|ref|XP_001592613.1| hypothetical protein SS1G_06854 [Sclerotinia sclerotiorum 1980] gi|154704632|gb|EDO04371.1| hypothetical protein SS1G_06854 [Sclerotinia sclerotiorum 1980 UF-70] Length = 580 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 88/198 (44%), Positives = 124/198 (62%), Gaps = 4/198 (2%) Query: 104 GIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTL 162 G+PVL V K +S SRL+G N PGI++ C+IG P S F G +GI+++SGTL Sbjct: 29 GLPVLPTV--KEENSQSKSRLVGANTPGIISAIGKCRIGFQPLSCFTPGRIGIVAKSGTL 86 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 +YEAV T++ GLGQS +G+GGD + GT F+D L++F D+ TE I+++GE+GG AE E Sbjct: 87 SYEAVASTTRAGLGQSLCIGMGGDILAGTNFVDALKIFEHDDDTEGIIIIGELGGEAELE 146 Query: 223 AAQFLKDEAKRG-RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 AA ++++ KR KP V G A PG+ MGHAGA G+ KI A + AG+ Sbjct: 147 AAAWIEEYKKRSLNPKPTAALVVGNHAVPGKVMGHAGAFTLPGEPDVLTKIKAFENAGVT 206 Query: 282 IAPSPARIGRSLVELLGS 299 + PA+ G ++ LLG Sbjct: 207 MVNHPAKFGNAMKTLLGD 224 >gi|21673914|ref|NP_661979.1| citrate lyase, subunit 2 [Chlorobium tepidum TLS] gi|21647054|gb|AAM72321.1| citrate lyase, subunit2 [Chlorobium tepidum TLS] Length = 610 Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 106/300 (35%), Positives = 173/300 (57%), Gaps = 18/300 (6%) Query: 1 MSILVDKNTK-VLVQGLTGKAGTFHTEQ--AILYCQTQVVGGIHPKKG---STYWTGGNV 54 MSIL +K+T+ V++ G+ G Q ++ V ++P + + GG + Sbjct: 1 MSILANKDTRAVIIGGVAGVNAAKRMAQFDYLINRPLTVQAFVYPPEAGQQKEIFRGGEL 60 Query: 55 -NVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMV 111 NV V+ ++A A E N ++IY+ S A +A +E++E+ I L+ ITEG+P D Sbjct: 61 KNVTVYPSLAPALNEHPDINTALIYLGASRATEAAMEALESPNIQLVSMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGTLT 163 R+K +K L GP+ GI++ C++G++ G +++R+GS G+L++SG L+ Sbjct: 121 RLKKLAQKLGKMLNGPSSIGIMSAGECRLGVIGGEYRNLKLCNLYRQGSFGVLTKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 EA++ +Q G G ++AV IGGD GT+F+ LE+F D AT+++VM+GE+GG+ EEEA Sbjct: 181 NEAMWLCAQNGDGITSAVAIGGDAYPGTDFVTYLEMFEKDPATKAVVMIGEVGGNLEEEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVI-SGGKGGAEDKINAMKEAGICI 282 A++L E +R + +G + P G GHAGA G G A K+NA++EAG + Sbjct: 241 AEWLAAEPRRIKLIAAIGGTCQEVLPQGMKFGHAGAKEGKKGAGSARSKMNALREAGALV 300 >gi|116335001|ref|YP_802496.1| succinyl-CoA synthetase alpha subunit [Candidatus Carsonella ruddii PV] gi|116235282|dbj|BAF35130.1| succinyl-CoA synthetase alpha subunit [Candidatus Carsonella ruddii PV] Length = 274 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 92/255 (36%), Positives = 150/255 (58%), Gaps = 16/255 (6%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV-NVPVFTTVAEAK 66 N +L G+TGK G HT+ +I + T++ GI+ K GG V ++P++++ +A Sbjct: 3 NNNILSYGITGKFGFQHTKVSINF-GTKIKCGINNSKN-----GGIVFHIPIYSSAIKAV 56 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + SV+Y+P I+E+I + I +I+CITE I V D++++K EK IG Sbjct: 57 KSNNCKISVLYIPYFVCKKTILENIYSGIKIIICITENISVFDILKIKYYCEKYKIIFIG 116 Query: 127 PNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 PN PG++ P ++GI+P SI +KG + I+S+SGTLTYEA+ + S + +GQS +GIGG Sbjct: 117 PNSPGLILPFLKIRLGIIPISIIKKGKLAIISKSGTLTYEAI-KISSKIIGQSICIGIGG 175 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 D + G ++ +L ++ T+ I+++GEIGG+ E K +K I ++ G Sbjct: 176 DIISGCNIKNIFKLVFLNKFTKKILIIGEIGGNFENVITT-----CKVNKK--IFFYIVG 228 Query: 246 KTAPPGRTMGHAGAV 260 +P + MGHAGA+ Sbjct: 229 IFSPLEKKMGHAGAI 243 >gi|193216249|ref|YP_001997448.1| ATP-citrate lyase/succinyl-CoA ligase [Chloroherpeton thalassium ATCC 35110] gi|193089726|gb|ACF15001.1| ATP-citrate lyase/succinyl-CoA ligase [Chloroherpeton thalassium ATCC 35110] Length = 617 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 108/303 (35%), Positives = 170/303 (56%), Gaps = 24/303 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTE---------QAILYCQTQVVGGIHPKKGSTYWTG 51 MSILV K+T+V++ G G+AG + Q L Q V ++ + Sbjct: 1 MSILVSKDTRVVIIG--GRAGLNAAKRMAEFDFLVQKSLTVQAFVYPPEQGQQKEIFHGA 58 Query: 52 GNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLD 109 N+PV++ ++EA E + ++IY+ A A E++EA+ I L+ ITEG+P D Sbjct: 59 KIENIPVYSQLSEALSEHPNIDTALIYIGAERAFGAAKEALEAKNIKLVSMITEGVPEKD 118 Query: 110 MVRVKARLEKSSSRLI-GPNCPGILTPDSCKIGIMPGS--------IFRKGSVGILSRSG 160 R+ A++ K +S++ GP+ GILT C++G++ G ++R GS G++++SG Sbjct: 119 ARRL-AKIAKQNSKIFNGPSSIGILTAGGCRLGVIGGEFNNLKKCLLYRPGSFGVITKSG 177 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 L+ E ++ +Q G G ST V IGGD GT+F+ LE+F D T+++V+VGE+GGS E Sbjct: 178 GLSNETMWLCAQNGDGISTTVSIGGDAYPGTDFVTYLEMFEQDLDTKAVVIVGEVGGSLE 237 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG-AEDKINAMKEAG 279 EEAA++ + +R R +VG + P G GHAGA G+ G A K+ AMK+AG Sbjct: 238 EEAAEWFAAKKRRIRLIGVVGGTCQEVLPQGMKFGHAGAKEGKGRAGSARSKMQAMKDAG 297 Query: 280 ICI 282 + Sbjct: 298 ALV 300 >gi|12407237|dbj|BAB21376.1| ATP-citrate lyase alpha-subunit [Chlorobium limicola] Length = 608 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 105/297 (35%), Positives = 169/297 (56%), Gaps = 18/297 (6%) Query: 1 MSILVDKNTK-VLVQGLTGKAGTFHTEQAILYCQT--QVVGGIHPKKG---STYWTGGNV 54 MSIL +K+T+ V++ G+ G Q V ++P + + GG + Sbjct: 1 MSILANKDTRAVIIGGVAGVNAAKRMAQFDFLVNRPLTVQAFVYPPEAGQQKEIFRGGEL 60 Query: 55 -NVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMV 111 NV V+ ++A A +E N ++IY+ S A A E++E+ I L+ ITEG+P D Sbjct: 61 KNVTVYDSLAPALEEHPDINTALIYLGASRAAQAAKEALESPNIQLVSMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGTLT 163 R+K +K L GP+ GI++ C++G++ G +++R+GS G+L++SG L+ Sbjct: 121 RLKKLAQKLGKMLNGPSSIGIMSAGECRLGVIGGEFKNLKLCNLYRQGSFGVLTKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 EA++ +Q G G ++AV IGGD GT+F+ LE+F D AT+++VM+GE+GG+ EEEA Sbjct: 181 NEAMWLCAQNGDGITSAVAIGGDAYPGTDFVTYLEMFEKDPATKAVVMIGEVGGNLEEEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVI-SGGKGGAEDKINAMKEAG 279 A++L E +R + +G + P G GHAGA G G A K+NA+++AG Sbjct: 241 AEWLAAEPRRIKLIAAIGGTCQEVLPQGMKFGHAGAKEGKKGAGSARSKMNALRDAG 297 >gi|70938995|ref|XP_740099.1| succinyl-CoA synthetase alpha subunit [Plasmodium chabaudi chabaudi] gi|56517575|emb|CAH77250.1| succinyl-CoA synthetase alpha subunit, putative [Plasmodium chabaudi chabaudi] Length = 147 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 77/137 (56%), Positives = 94/137 (68%), Gaps = 4/137 (2%) Query: 14 QGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--GNVNVPVFTTVAEAKERTAA 71 Q + G+FHT +A+ Y T++VGG++P K + WT +PVF +V EAKE+T Sbjct: 12 QYFSLFQGSFHTTEALKY-GTKMVGGVNPSKKGSTWTSIDNKYTLPVFGSVLEAKEKTNC 70 Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS-SRLIGPNCP 130 ASVIYVP A +AIIESIEAEIPLIVCITEGI DM+ VKA L S+ SRLIGPNCP Sbjct: 71 YASVIYVPHQHAKNAIIESIEAEIPLIVCITEGICQHDMLEVKACLNMSNKSRLIGPNCP 130 Query: 131 GILTPDSCKIGIMPGSI 147 GI+ P KIGI+P I Sbjct: 131 GIIKPGESKIGILPSHI 147 >gi|254470932|ref|ZP_05084335.1| succinyl-CoA synthetase, alpha subunit [Pseudovibrio sp. JE062] gi|211960074|gb|EEA95271.1| succinyl-CoA synthetase, alpha subunit [Pseudovibrio sp. JE062] Length = 94 Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 66/90 (73%), Positives = 84/90 (93%) Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 M+GEIGGSAEEEAA++LK++A +GRKKP+VGF+AG+TAPPGRTMGHAGAVISGGKGGA+D Sbjct: 1 MIGEIGGSAEEEAAEWLKEQAAKGRKKPMVGFIAGRTAPPGRTMGHAGAVISGGKGGADD 60 Query: 271 KINAMKEAGICIAPSPARIGRSLVELLGSL 300 KI AM++AGI ++PSPA++G++LV LL L Sbjct: 61 KIAAMEDAGIRVSPSPAKLGKTLVALLEEL 90 >gi|193212664|ref|YP_001998617.1| ATP-citrate lyase/succinyl-CoA ligase [Chlorobaculum parvum NCIB 8327] gi|193086141|gb|ACF11417.1| ATP-citrate lyase/succinyl-CoA ligase [Chlorobaculum parvum NCIB 8327] Length = 608 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 104/297 (35%), Positives = 169/297 (56%), Gaps = 18/297 (6%) Query: 1 MSILVDKNTK-VLVQGLTGKAGTFHTEQAILYCQT--QVVGGIHPKKG---STYWTGGNV 54 MSIL +K+T+ V++ G+ G Q V ++P + + GG + Sbjct: 1 MSILANKDTRAVIIGGVAGVNAAKRMAQFDFLVNRPLTVQAFVYPPEAGQQKEIFRGGEL 60 Query: 55 -NVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMV 111 NV V+ ++A A +E N ++IY+ S A A E++E+ I L+ ITEG+P D Sbjct: 61 KNVTVYDSLAPALEEHPDINTALIYLGASRAAQAAKEALESPNIQLVSMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGTLT 163 R++ +K L GP+ GI++ C++G++ G +++R+GS G+L++SG L+ Sbjct: 121 RLRKLAQKLGKMLNGPSSIGIMSAGECRLGVIGGEFKNLKLCNLYRQGSFGVLTKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 EA++ +Q G G ++AV IGGD GT+F+ LE+F D AT+++VM+GE+GG+ EEEA Sbjct: 181 NEAMWLCAQNGDGITSAVAIGGDAYPGTDFVTYLEMFEKDPATKAVVMIGEVGGNLEEEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVI-SGGKGGAEDKINAMKEAG 279 A++L E +R + +G + P G GHAGA G G A K+NA+++AG Sbjct: 241 AEWLAAEPRRIKLIAAIGGTCQEVLPQGMKFGHAGAKEGKKGAGSARSKMNALRDAG 297 >gi|67518053|ref|XP_658797.1| hypothetical protein AN1193.2 [Aspergillus nidulans FGSC A4] gi|40746630|gb|EAA65786.1| hypothetical protein AN1193.2 [Aspergillus nidulans FGSC A4] Length = 581 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 67/144 (46%), Positives = 99/144 (68%), Gaps = 1/144 (0%) Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 I+++SGTL+YE V T++ GLGQS + +GGDP+ GT F+D L++F D TE I++VGE Sbjct: 85 IVAKSGTLSYETVASTTRAGLGQSLCISMGGDPLAGTNFVDALKIFENDPDTEGIILVGE 144 Query: 215 IGGSAEEEAAQFLKDEAKRGRK-KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN 273 IGG+AE +AA++++D +R KPI+ V G+ APPGR MGHAGA + G+ G E+K Sbjct: 145 IGGTAEMDAAEWIRDYRRRTTSPKPIMALVGGRQAPPGRIMGHAGAWTAPGEPGPEEKYR 204 Query: 274 AMKEAGICIAPSPARIGRSLVELL 297 A++ AG + P + G+ + LL Sbjct: 205 ALERAGAVMVNHPEKFGKGMKALL 228 >gi|67925571|ref|ZP_00518901.1| CoA-binding [Crocosphaera watsonii WH 8501] gi|67852590|gb|EAM48019.1| CoA-binding [Crocosphaera watsonii WH 8501] Length = 306 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 93/304 (30%), Positives = 165/304 (54%), Gaps = 21/304 (6%) Query: 6 DKNTKVLVQGLTGKAGTFHTEQAILYCQ-TQVVGGIHPKKGSTYWTGGNVN-VPVFTTVA 63 + ++KVL+QG+T + + + Q T +V GI + ++ ++N +PVFT V Sbjct: 4 EADSKVLIQGITHPLAISYAPR--MKAQGTNIVAGITLDEETS-----DINDIPVFTLVE 56 Query: 64 EA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA E + S+I+ PP DA +E+I A I +V +T +P LD++ + + + +++ Sbjct: 57 EAVTEVGKIDTSLIFSPPYEVLDAGLEAIAANIEQLVIVTAWVPPLDLITLLEQAKATNT 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++G G+L PD+ +G+M + KGSVGI+SR L E + ++ GLGQS A+ Sbjct: 117 FVLGSGSEGLLVPDNFWLGVMEPEFYSKGSVGIISRCDRLMDEVAKRLTKAGLGQSLAIS 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G D + G+ F L++ D++T++IV++G+ S E AAQ++ G +KP++ + Sbjct: 177 LGADWIMGSNFEQWLQIMEEDDSTKAIVLLGQPYSSPELLAAQYIDS----GIEKPVIAY 232 Query: 243 VAGKTAPPGRTMGHAGAVI-------SGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 + G AP R+ G A ++I S + A+K+AG+ IA + I + + Sbjct: 233 LPGIQAPINRSFGDATSIIASQLSYQSTSITEENQTVTALKKAGVKIANNVEEIPKLVKR 292 Query: 296 LLGS 299 L S Sbjct: 293 LFPS 296 >gi|172037273|ref|YP_001803774.1| putative succinyl-CoA synthetase subunit alpha [Cyanothece sp. ATCC 51142] gi|171698727|gb|ACB51708.1| putative succinyl-CoA synthetase alpha chain [Cyanothece sp. ATCC 51142] Length = 306 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 19/295 (6%) Query: 6 DKNTKVLVQGLTGKAGTFHTEQAILYCQ-TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + ++KVL+QG+T G + A + + T +V GI ++ T ++P+FT V E Sbjct: 4 EADSKVLIQGITNPLGISYA--ARMKAKGTNIVAGITLEEQ----TAEMDDIPIFTLVEE 57 Query: 65 A-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 A K+ S+I PP DA +E++ A I +V +T +P LD++ + + + +++ Sbjct: 58 AVKQIGEIEISLILTPPYEVLDAGLEAMAAGIKQLVIVTSRVPPLDLIALLEQAQVTNTF 117 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++G G+L PD +GIM + G VGI+SR L E +Q GLGQS A+ + Sbjct: 118 VLGSGSEGLLVPDQFWLGIMEPDFYTAGQVGIISRCDRLMDEVALNLTQAGLGQSLAISL 177 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G D V G+ F L++ DE TE+I+++G+ S E AA+++ +KP++ ++ Sbjct: 178 GSDAVMGSNFEQWLQIMEEDETTEAIILLGQPYSSPELLAAEYIDS----AIEKPVIAYL 233 Query: 244 AGKTAPPGRTMGHAGAVIS-------GGKGGAEDKINAMKEAGICIAPSPARIGR 291 G AP R+ G A ++I+ G K I A+K+AG+ IA S I + Sbjct: 234 PGILAPMNRSFGDATSIIASQLSYQRGDKTRENPTITALKKAGVKIANSVEEIPK 288 >gi|147677694|ref|YP_001211909.1| succinyl-CoA synthetase, alpha subunit [Pelotomaculum thermopropionicum SI] gi|146273791|dbj|BAF59540.1| succinyl-CoA synthetase, alpha subunit [Pelotomaculum thermopropionicum SI] Length = 162 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 106/162 (65%), Gaps = 5/162 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I++D+NT+VLVQG+TG G FHT Q + Y T++V G+ P KG G +PV+ Sbjct: 1 MAIIIDENTQVLVQGITGNQGVFHTRQMLAY-GTKIVAGVTPGKGGATVEG----IPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E +ASV+++P DA ES+EA +P++V +TEG+PV D +++ A ++ Sbjct: 56 SVREACENHRIDASVLFIPAPFTKDAAFESLEAGVPVVVIVTEGVPVHDEIQIVAFAKRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTL 162 + ++GPN GI + CKIGI P F +G VG++SRSGTL Sbjct: 116 GAIVLGPNTFGICSSGKCKIGIPPNQYFVEGPVGVVSRSGTL 157 >gi|307153609|ref|YP_003888993.1| CoA-binding domain-containing protein [Cyanothece sp. PCC 7822] gi|306983837|gb|ADN15718.1| CoA-binding domain protein [Cyanothece sp. PCC 7822] Length = 296 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 151/291 (51%), Gaps = 19/291 (6%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV-NVPVFTTVAEAK 66 N+ VL+QG+T + + + T +V G+ G G + N+P+F V EA Sbjct: 6 NSTVLIQGMTSPFALAYVPRLKSFG-TNIVAGVSVGAG-----GQQIANIPIFDLVEEAI 59 Query: 67 ERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLI 125 + S+I+V P DA +E+I A I I+ IT G+P LDMV + + + +++ ++ Sbjct: 60 ANVGKIDISLIFVEPYQVLDAALEAIAAGIEQIIIITRGVPPLDMVDLLKKSQVNNTFIL 119 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 G GI+ PD +GI +R G VG++SRS LT E S GQS AV +G Sbjct: 120 GSGSQGIIIPDKLWLGIGEPQCYRAGKVGLISRSDRLTDEIALILSASKYGQSMAVSLGT 179 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 D + G F L++ D+ T++IV++G+ GSAE AA+++ +KP++ ++AG Sbjct: 180 DGIIGASFEQWLQILEEDDGTDAIVLLGQANGSAEFSAAEYIASSI----EKPVIAYIAG 235 Query: 246 KTAPPGRTMGHAGAVISGGKGGA-------EDKINAMKEAGICIAPSPARI 289 ++ R+ G A +I+ + + + A KEA I +A SP +I Sbjct: 236 ASSSVKRSFGDAATIIATQLSYSLPITRTEQQLLTAFKEANITVAKSPFQI 286 >gi|251772179|gb|EES52749.1| Succinyl-CoA synthetase, alpha subunit [Leptospirillum ferrodiazotrophum] Length = 327 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 95/310 (30%), Positives = 154/310 (49%), Gaps = 18/310 (5%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ T ++V G TG+ + +++ V GI P KG + + VPVF T Sbjct: 4 TVYLNDKTGIVVIGATGREASQVIKESEALYPGIVKAGITPGKGGST----ELPVPVFDT 59 Query: 62 VAEA----KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 +AEA K N ++IYVPP DA++E ++ I ++ ITE +P+ D + Sbjct: 60 LAEAVKDPKVGKLLNTALIYVPPVSVLDAVMECLDNGIKVLYIITEHVPIRDSQIIYQEK 119 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 E+ + ++G G P +IG + P F+ G + ++S+SG LT + Sbjct: 120 ERRGAIIVGGTSLGCFVPSVGRIGAIGGKDPSVAFKDGGIVVISKSGGLTVTTAEMFKRR 179 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G G A+ IGGD + T + DVL+ D +++VM+GE GG+ EE+ A + Sbjct: 180 GWGTYMALAIGGDIISNTTYADVLKQIKGDPKVKAVVMLGEPGGAYEEQVADLI---TSG 236 Query: 234 GRKKPIVGFVAGK---TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 G KP+ F++G+ P G GHAGA++ G G A DKI+ ++ AG A Sbjct: 237 GFDKPVAAFISGRFQERMPEGVAFGHAGAIVERGMGKATDKISRLEAAGKKFPVKVAFYY 296 Query: 291 RSLVELLGSL 300 LV+ + SL Sbjct: 297 HDLVKAIESL 306 >gi|196232109|ref|ZP_03130964.1| Succinate--CoA ligase (GDP-forming) [Chthoniobacter flavus Ellin428] gi|196223831|gb|EDY18346.1| Succinate--CoA ligase (GDP-forming) [Chthoniobacter flavus Ellin428] Length = 168 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 68/135 (50%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV T++LVQG+TG G+ H + ++ Y TQ+V G+ P KG + VP+F Sbjct: 1 MSILVTPQTRLLVQGITGDFGSRHAKLSLDY-GTQLVAGVTPGKGGQTFEHNGHKVPIFD 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T A S I+VPP A DAI+E ++A + L V ITEGIPV DMV+VKA ++ Sbjct: 60 TVGEAAKQTGATVSAIFVPPPFAADAILECVDAGLDLAVAITEGIPVSDMVKVKAAMQGR 119 Query: 121 SSRLIGPNCPGILTP 135 +RLIGPNCPG++TP Sbjct: 120 KTRLIGPNCPGLVTP 134 >gi|294879337|ref|XP_002768651.1| succinyl-CoA synthetase alpha subunit, putative [Perkinsus marinus ATCC 50983] gi|239871349|gb|EER01369.1| succinyl-CoA synthetase alpha subunit, putative [Perkinsus marinus ATCC 50983] Length = 134 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/110 (60%), Positives = 83/110 (75%), Gaps = 5/110 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QGLTGK GTFHT QAI Y T++VGG++PKK T + N+P+F V Sbjct: 30 VWVDKNTKVICQGLTGKQGTFHTAQAIEY-GTKMVGGVNPKKAGTT----HNNLPIFANV 84 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR 112 EA++ T A+ASV+YVPP A A +E+IEAEIPL+VCITEGIP DMV+ Sbjct: 85 MEARQATGADASVVYVPPFAAASACLEAIEAEIPLLVCITEGIPQHDMVK 134 >gi|126659213|ref|ZP_01730351.1| succinyl-CoA synthetase [Cyanothece sp. CCY0110] gi|126619518|gb|EAZ90249.1| succinyl-CoA synthetase [Cyanothece sp. CCY0110] Length = 305 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 92/286 (32%), Positives = 150/286 (52%), Gaps = 18/286 (6%) Query: 6 DKNTKVLVQGLTGKAGTFHTEQAILYCQ-TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + ++KVL+QG+T G + + + Q T +V GI ++ ++P+FT V E Sbjct: 4 EADSKVLIQGITNPLGISYAGR--MKAQGTNIVAGITLEEQ----IDQIDDIPIFTLVEE 57 Query: 65 A-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 A K + S+I PP DA +E++ A I +V +T +P LD++ + + + ++S Sbjct: 58 AVKTVGEIDISLILTPPYEVLDAGLEAMAAGIKQLVIVTSWVPPLDLIALLEQAQVTNSF 117 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++G G+L P+ +GIM + G VG++SR L E SQ GLGQS A+ + Sbjct: 118 VLGSGSEGLLVPEQFWLGIMEPEFYTTGPVGMISRCDRLMDEVAKTLSQAGLGQSLAISL 177 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G D V G+ F L++ DE TE+IV++G SAE AAQ++ +KP++ ++ Sbjct: 178 GCDAVMGSNFEQWLQIMEEDETTEAIVLLGHPYSSAELLAAQYIGS----AIEKPVIAYL 233 Query: 244 AGKTAPPGRTMGHAGAVISG------GKGGAEDKINAMKEAGICIA 283 G AP R G A ++I+ GK I A K+AG+ +A Sbjct: 234 PGIQAPINRNFGDATSIIASQLSYQTGKTNENQTITAFKKAGVKMA 279 >gi|218437306|ref|YP_002375635.1| CoA-binding protein [Cyanothece sp. PCC 7424] gi|218170034|gb|ACK68767.1| CoA-binding domain protein [Cyanothece sp. PCC 7424] Length = 295 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 89/294 (30%), Positives = 153/294 (52%), Gaps = 26/294 (8%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN----VNVPVFTTVA 63 N+ VL+QG+T + + + T +V GI+ GG ++P+F V Sbjct: 6 NSTVLIQGMTTPLAYAYVPR-LKNAGTNIVAGIN--------VGGAGEKIADIPMFDLVE 56 Query: 64 EAKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA + S+I+V P DA +E++ ++I I+ IT G+P LDMV++ + + +++ Sbjct: 57 EAMTNVGKIDISLIFVEPYEVLDAALEAMASQIEQIIIITPGVPPLDMVQLLKKAQSTNT 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++G GI+ PD +GI ++ G VG++SRS LT E ++ LGQS AV Sbjct: 117 FILGSGSQGIIIPDKLWLGICEPQCYKSGKVGLISRSNRLTDEVALTLTEAKLGQSMAVS 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G D + G + L++ DE TE+IV++G+ GSAE AA+++ +KP++ + Sbjct: 177 LGTDGIIGASYEQWLQILEEDEETEAIVLIGQANGSAELAAAEYIASTI----EKPVIAY 232 Query: 243 VAGKTAPPGRTMGHAGAVISGG-------KGGAEDKINAMKEAGICIAPSPARI 289 + G ++ R G A +I+ G + + A KEA I IA S +++ Sbjct: 233 MVGNSSVK-RIFGDAATIIATQLSYSIPTLGTEKQLMTAFKEANITIAKSLSQL 285 >gi|270718872|ref|ZP_06223274.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae HK1212] gi|270315494|gb|EFA27730.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae HK1212] Length = 102 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/106 (63%), Positives = 79/106 (74%), Gaps = 4/106 (3%) Query: 143 MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA 202 MP I +KG VGI+SRSGTLTYEAV QT+ EG GQST VGIGGDP+ G+ FID+LE F Sbjct: 1 MPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTCVGIGGDPILGSSFIDILERFQQ 60 Query: 203 DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 D TE+IVM+GEIGGSA EEA F+KD KP+V ++AG TA Sbjct: 61 DPETEAIVMIGEIGGSAXEEAXIFIKDHV----TKPVVAYIAGITA 102 >gi|302768983|ref|XP_002967911.1| hypothetical protein SELMODRAFT_408824 [Selaginella moellendorffii] gi|300164649|gb|EFJ31258.1| hypothetical protein SELMODRAFT_408824 [Selaginella moellendorffii] Length = 150 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/109 (61%), Positives = 82/109 (75%), Gaps = 5/109 (4%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+VL QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF + Sbjct: 33 AVFVDKNTRVLCQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNS 87 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM 110 V EAK T ANA+VIYVPP A AI+E++EAE+ L+VCITEGIP DM Sbjct: 88 VHEAKAETKANATVIYVPPKFAAAAIMEAVEAELDLVVCITEGIPQHDM 136 >gi|302761178|ref|XP_002964011.1| hypothetical protein SELMODRAFT_405593 [Selaginella moellendorffii] gi|300167740|gb|EFJ34344.1| hypothetical protein SELMODRAFT_405593 [Selaginella moellendorffii] Length = 150 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 67/109 (61%), Positives = 82/109 (75%), Gaps = 5/109 (4%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+VL QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF + Sbjct: 33 AVFVDKNTRVLCQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNS 87 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM 110 V EAK T ANA+VIYVPP A AI+E++EAE+ L+VCITEGIP DM Sbjct: 88 VHEAKAETKANATVIYVPPKFAAAAIMEAVEAELDLVVCITEGIPQHDM 136 >gi|809679|emb|CAA33792.1| unnamed protein product [Escherichia coli] Length = 117 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 67/120 (55%), Positives = 89/120 (74%), Gaps = 4/120 (3%) Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 ST VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ K Sbjct: 1 STCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TK 56 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+VG++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 57 PVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 116 >gi|124515909|gb|EAY57418.1| Succinyl-CoA synthetase, alpha subunit [Leptospirillum rubarum] Length = 328 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 97/310 (31%), Positives = 156/310 (50%), Gaps = 23/310 (7%) Query: 3 ILVDKNTKVLVQGLTGK-AGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 + +++ T ++V G TG+ A E LY V G+ P KG + + VPVF T Sbjct: 5 VYLNEKTGIVVIGATGREASQVIRESEALYPGI-VKAGVTPGKGGST----ELPVPVFDT 59 Query: 62 VAEA----KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 +++A K + N ++IYVPP DA++E ++ I +I ITE +P+ D + Sbjct: 60 LSQAVQDPKVGKSINTALIYVPPVSVLDAVMECLDGGIKVIYIITEHVPIRDSEIIYQEK 119 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + + ++G G P +IG + P F+ G + I+S+SG LT + Sbjct: 120 VRRGAVIVGGTSLGCFVPSVGRIGAVGGKDPSIAFKAGGLVIISKSGGLTVTTAEMFRRR 179 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G G A+ IGGD + T + DVL+ D + +VM+GE GGS EE+AA+ ++ Sbjct: 180 GWGTYCALAIGGDIISNTTYADVLKELKDDPNVKGVVMLGEPGGSYEEQAAELIQ---AG 236 Query: 234 GRKKPIVGFVAGK---TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 G KP+ F++G+ P G GHAGA++ G G A DKI ++ AG P ++ Sbjct: 237 GFNKPVAAFISGRFQERMPEGVAFGHAGAIVERGMGKASDKIARLEAAG---KKHPVKVA 293 Query: 291 RSLVELLGSL 300 EL+ ++ Sbjct: 294 FYYHELVSAI 303 >gi|206602153|gb|EDZ38635.1| Succinyl-CoA synthetase, alpha subunit [Leptospirillum sp. Group II '5-way CG'] Length = 328 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 96/310 (30%), Positives = 156/310 (50%), Gaps = 23/310 (7%) Query: 3 ILVDKNTKVLVQGLTGK-AGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 + +++ T ++V G TG+ A E LY V G+ P KG + + VPVF T Sbjct: 5 VYLNEKTGIVVIGATGREASQVIRESEALYPGI-VKAGVTPGKGGST----ELPVPVFDT 59 Query: 62 VAEA----KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 +++A K + N ++IYVPP DA++E ++ + +I ITE +P+ D + Sbjct: 60 LSQAVQDPKVGQSINTALIYVPPVSVLDAVMECLDGGMKVIYIITEHVPIRDSEIIYQEK 119 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + + ++G G P +IG + P F+ G + I+S+SG LT + Sbjct: 120 VRRGAVIVGGTSLGCFVPSVGRIGAIGGKDPSIAFKAGGLVIISKSGGLTVTTAEMFRRR 179 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G G A+ IGGD + T + DVL+ D + +VM+GE GGS EE+AA+ ++ Sbjct: 180 GWGTYCALAIGGDIISNTTYADVLKELKDDPNVKGVVMLGEPGGSYEEQAAELIQ---AG 236 Query: 234 GRKKPIVGFVAGK---TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 G KP+ F++G+ P G GHAGA++ G G A DKI ++ AG P ++ Sbjct: 237 GFNKPVAAFISGRFQERMPEGVAFGHAGAIVERGMGKASDKIARLEAAG---KKHPVKVA 293 Query: 291 RSLVELLGSL 300 EL+ ++ Sbjct: 294 FYYHELVSAI 303 >gi|147837841|emb|CAN73796.1| hypothetical protein VITISV_018824 [Vitis vinifera] Length = 468 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/109 (60%), Positives = 83/109 (76%), Gaps = 5/109 (4%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG ++ +P+F T Sbjct: 34 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGM----EHLGLPIFNT 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM 110 VAEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DM Sbjct: 89 VAEAKAETRANASVIYVPPPFAAAAIMEAVEAELDLVVCITEGIPQHDM 137 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 71/138 (51%), Positives = 83/138 (60%), Gaps = 33/138 (23%) Query: 103 EGIPVLDMV-----RVKARLEKSS-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGIL 156 EG P+L+ V +VKA L + S +RLIGPNCPGI+ P CKIGIMPG I + G VGI+ Sbjct: 326 EGTPLLEGVSSARFKVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIV 385 Query: 157 SRSGTLTYEA---------------------------VFQTSQEGLGQSTAVGIGGDPVK 189 SRSGTLTYEA VFQT+ GLGQST VGIGGDP Sbjct: 386 SRSGTLTYEAIKRXFVVSYCTNPFVAHTDPITILADLVFQTTAVGLGQSTCVGIGGDPFN 445 Query: 190 GTEFIDVLELFLADEATE 207 GT F+D ++ FLAD TE Sbjct: 446 GTNFVDCVKKFLADPQTE 463 >gi|226291384|gb|EEH46812.1| succinyl-CoA ligase subunit beta [Paracoccidioides brasiliensis Pb18] Length = 664 Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 83/193 (43%), Positives = 119/193 (61%), Gaps = 7/193 (3%) Query: 110 MVRVKARLE-KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 + +V A L+ +S SRL+G NCPGI++ C+IG P F G +GI+++SGTL YE V Sbjct: 131 VFKVHAMLKTQSKSRLVGANCPGIISAIGKCRIGFQPLPCFSPGHIGIVAKSGTLGYETV 190 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 TS+ GLGQS +G+GGD + GT+F+D L +F D+ T I++VGEIGG+AE AA Sbjct: 191 ASTSRAGLGQSLCIGMGGDVLAGTDFVDALSIFEHDDDTHGIIIVGEIGGTAEIAAA--- 247 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 E ++PI+ + G AP GR MGHAGA + G+ A+ KI A++ AG + P Sbjct: 248 --EWIAHYRRPIMAVICGIHAPLGRVMGHAGAWVGPGEPDAQTKIKALQNAGAVMVHHPE 305 Query: 288 RIGRSLVELLGSL 300 G + LL ++ Sbjct: 306 DFGEGMKMLLSNM 318 >gi|159027649|emb|CAO89513.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 295 Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 87/303 (28%), Positives = 158/303 (52%), Gaps = 24/303 (7%) Query: 6 DKNTKVLVQGLTGKAGTFHTEQAILYCQ-TQVVGGIHPKKGSTYWTGGNV--NVPVFTTV 62 DK+ ++++QG+ G ++ A L Q T +V G+ +G G + +PVF V Sbjct: 5 DKD-QIIMQGIDRPLGKYYA--ARLKTQGTCLVAGVASGQG------GEIIAEIPVFDLV 55 Query: 63 AEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 AEA E S+I VPP+ DA +E+I + IP ++ +T G+P LD+V + + Sbjct: 56 AEAVAEAGEIKTSLILVPPNQVLDAALEAIASAIPQLIIVTPGVPPLDLVELLKIASTTG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 + ++GP G++ P+ +GI S ++ G++G+++R + E + G G+S AV Sbjct: 116 TLILGPGSQGVIIPNYLWLGICEPSFYQLGTIGLITRGDRIGDEVAKTLTAAGYGESMAV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G D + G+ L++F D+ TE+I++V ++GG AE EAA+++ +KP++ Sbjct: 176 NLGTDGIIGSNLSQWLQVFEEDDNTEAILLVSQVGGKAEIEAAKYI----ASAIEKPVIA 231 Query: 242 FVAGKTAPPGRTMGHAGAVISG-------GKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 ++ G A G +IS K +D ++ +EAG+ + A + SL Sbjct: 232 YLVGLNAAIETNFGDTETIISNQLSYSVAAKNTRKDSLHHFQEAGVTVVEKLADLPASLA 291 Query: 295 ELL 297 ++L Sbjct: 292 KVL 294 >gi|261886031|ref|ZP_06010070.1| succinyl-CoA synthetase, alpha subunit [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 153 Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 71/158 (44%), Positives = 98/158 (62%), Gaps = 7/158 (4%) Query: 143 MPGSIFRKGSV--GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 MP +F++ V G++S+SG+LTYE Q G G STAVGIG D V G + ++L +F Sbjct: 1 MPAMVFKRAGVYIGLISKSGSLTYEGANQILSAGYGISTAVGIGVDSVIGLTYSELLPMF 60 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAV 260 +IVM+GEIGGS EA +K+ KKP+V F+AG++AP G+ MGHAGA+ Sbjct: 61 ENGPDATAIVMIGEIGGSLGIEACSIIKN-----MKKPVVAFIAGQSAPKGKRMGHAGAI 115 Query: 261 ISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ISG A K+ A+ AG + SPA IG+ + EL+G Sbjct: 116 ISGEDSSAAGKMKALSAAGAHVVASPAHIGKKIKELIG 153 >gi|326904826|gb|EGE51759.1| LOW QUALITY PROTEIN: hypothetical protein TBPG_02745 [Mycobacterium tuberculosis W-148] Length = 137 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/138 (50%), Positives = 94/138 (68%), Gaps = 8/138 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T G + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 -RLEK-SSSRLIGPNCPG 131 LE +R+IGPNCPG Sbjct: 120 YNLEAGHKTRIIGPNCPG 137 >gi|213027469|ref|ZP_03341916.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 118 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 66/121 (54%), Positives = 86/121 (71%), Gaps = 5/121 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T V+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTNVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 S 121 + Sbjct: 116 A 116 >gi|3767592|dbj|BAA33855.1| ORF1 [Staphylococcus aureus] Length = 120 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 59/108 (54%), Positives = 81/108 (75%), Gaps = 4/108 (3%) Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 V GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++K KP+VGF+ G+T Sbjct: 1 VNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIK----ANMTKPVVGFIGGQT 56 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 APPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+E Sbjct: 57 APPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIE 104 >gi|213621813|ref|ZP_03374596.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 114 Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 66/119 (55%), Positives = 84/119 (70%), Gaps = 5/119 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T V+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTNVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDE 114 >gi|302536355|ref|ZP_07288697.1| predicted protein [Streptomyces sp. C] gi|302445250|gb|EFL17066.1| predicted protein [Streptomyces sp. C] Length = 241 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 65/137 (47%), Positives = 93/137 (67%), Gaps = 3/137 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++K++KV+VQG+TG G HT + +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLNKDSKVIVQGMTGATGMKHT-KLMLADGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD--MVRVKARLE 118 +VAEA E+T AN SV++VPP+ A A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 SVAEAMEKTGANVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAYATAK 119 Query: 119 KSSSRLIGPNCPGILTP 135 + +R+IGPNCPG++ P Sbjct: 120 GNKTRIIGPNCPGLIPP 136 >gi|218246042|ref|YP_002371413.1| CoA-binding domain-containing protein [Cyanothece sp. PCC 8801] gi|257059088|ref|YP_003136976.1| CoA-binding protein [Cyanothece sp. PCC 8802] gi|218166520|gb|ACK65257.1| CoA-binding domain protein [Cyanothece sp. PCC 8801] gi|256589254|gb|ACV00141.1| CoA-binding domain protein [Cyanothece sp. PCC 8802] Length = 298 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 79/292 (27%), Positives = 152/292 (52%), Gaps = 17/292 (5%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 ++KVL+QG++ G + + + T +V GI T ++P+F V +A Sbjct: 6 DSKVLIQGISTPLGAHYGARMKAFG-TNIVAGISLDGE----TPDIKDLPIFNLVEQAIA 60 Query: 68 RTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + + S+I+ PP DA +E++ A I ++ I+ +P LDM+ + + E +++ ++G Sbjct: 61 QVGEIDISLIFTPPYSVLDAALEAMTAGIQQLIIISSEVPPLDMLTILRQAEATNTFILG 120 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P G++ P++ +GI + G+VGI+SR L E + + GQS AV +G + Sbjct: 121 PGSQGLIVPNTIWLGICEPQFYTPGAVGIISRGDRLLDEVARELTLNKFGQSLAVSLGTN 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 V G+ F L++ D+AT+ IV++G+ SAE AA+++ +KP++ ++ G Sbjct: 181 WVIGSNFEQWLQVMEEDDATQVIVLLGQANSSAEVAAAEYIAS----AIEKPVIAYITGL 236 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKIN-------AMKEAGICIAPSPARIGR 291 AP R+ A +++ + +I+ A+K+A + +A P+ I + Sbjct: 237 YAPIERSFRDAKTIVTTQLVSSSPQISTDQNVLTALKKARVKLAQRPSEIPK 288 >gi|16330972|ref|NP_441700.1| succinyl-CoA synthetase [Synechocystis sp. PCC 6803] gi|1653466|dbj|BAA18380.1| succinyl-CoA synthetase [Synechocystis sp. PCC 6803] Length = 302 Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 83/293 (28%), Positives = 143/293 (48%), Gaps = 21/293 (7%) Query: 7 KNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV--NVPVFTTVAE 64 K +KVL+QG+ G + EQ + C T++V G+ P G G + ++PVF V Sbjct: 5 KESKVLLQGVHHPLGLTYLEQ-MRSCGTKLVAGVSPGHG------GELIGDLPVFDLVDL 57 Query: 65 A-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 A K + S+I PP DA +E+I A I +V ++ G+P LDM+ + + + + Sbjct: 58 AVKTVGPVDISLILNPPYRVLDAALEAIAAGIRQLVIVSAGVPPLDMITLLREAQATHTL 117 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++G GI+ P +G + + + G +GI+S LT + S GLGQS + + Sbjct: 118 ILGSGSQGIMIPQQFSVGTLDPNCYLPGPIGIISHCDRLTDDIAQTLSAAGLGQSMVISL 177 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G D + G+ F L++ DE T +I+++G+ + E AA D +KP+V ++ Sbjct: 178 GTDGLNGSNFEQWLQVLEEDEQTATILLLGQPNSNGEMRAA----DYVASAIEKPVVAYL 233 Query: 244 AGKTAPPGRTMGHAGAVISGGKG-------GAEDKINAMKEAGICIAPSPARI 289 AG+ A R G + +++ E + A + A I +A +P + Sbjct: 234 AGRGAKIKRHFGDSLTIVANQLSHKRPLLTSVEQTVQAFENANIPVAEAPWEL 286 >gi|269837817|ref|YP_003320045.1| CoA-binding domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269787080|gb|ACZ39223.1| CoA-binding domain protein [Sphaerobacter thermophilus DSM 20745] Length = 280 Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 92/268 (34%), Positives = 140/268 (52%), Gaps = 17/268 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D T+VLVQG+T A TEQ + Y T VV G+ P + G VPV+ Sbjct: 1 MTVLIDTTTRVLVQGITEDAAAALTEQMLAYG-TPVVAGVAPGRYGDRVAG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VA+A +A++I VPP DA +E++ +I L++ TE +P D+ R+ S Sbjct: 56 SVADAVLFHQPSATLIAVPPDAVLDAALEALSHDIRLLLIATEFVPERDVQRLLGWARDS 115 Query: 121 SSRLIGPNCPGILTPDS-CKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 ++R++GP GI+ P + +IG + P F G VG+++ TL + T + G+ Sbjct: 116 AARVLGPGSAGIIAPAARLRIGTIGGENPDRNFSPGRVGVIAPGATLAADIAALTRRLGI 175 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G STAV G P+ T +L LF D+AT +V+ G AEE A + A+R Sbjct: 176 GISTAVSTGTAPMVVTTPASLLPLFERDDATAGVVLAGN-AAWAEEVADAIM---AQRYT 231 Query: 236 KKPIVGFVAGKTAPPG-RTMGHAGAVIS 262 K IV G AP G + AGA+++ Sbjct: 232 KPLIVASTDG--APDGTDALLDAGALVA 257 >gi|170077512|ref|YP_001734150.1| succinyl-CoA synthetase, alpha chain [Synechococcus sp. PCC 7002] gi|169885181|gb|ACA98894.1| succinyl-CoA synthetase, alpha chain [Synechococcus sp. PCC 7002] Length = 311 Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 73/257 (28%), Positives = 129/257 (50%), Gaps = 10/257 (3%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 N +L+QG+ ++ + + Y T+++GG+ G G +P+F V EAK Sbjct: 6 NHNILIQGIHTPLAQYYLPRMVAYG-TEIIGGVSAGGGGETLDG----IPIFDLVMEAKA 60 Query: 68 RTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + S+I+V P DA E+I A I ++ ++ G+P LDMVR+ + ++ +++G Sbjct: 61 QVGEITTSLIFVEPFEVLDAAFEAIAAGIKQLIIVSAGVPPLDMVRLLCQAQQEEVQILG 120 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P G++ P +G + F+ G V +LSR +L+ E +Q GLGQS V +G Sbjct: 121 PGSSGLVIPGQLWLGTSFVNHFQPGEVALLSRFSSLSQEVAILLNQAGLGQSYVVDVGNA 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + G+ F L D T++I ++G G E + ++D+ + P+V ++ G Sbjct: 181 DLPGSHFAQWLHYLDQDPQTQAIALLGRYGSQEEIDLIPLIRDQI----QTPVVTYLCGS 236 Query: 247 TAPPGRTMGHAGAVISG 263 AP R+ AG +I+ Sbjct: 237 HAPIQRSCYDAGTIIAN 253 >gi|166365653|ref|YP_001657926.1| succinyl-CoA synthetase alpha chain [Microcystis aeruginosa NIES-843] gi|166088026|dbj|BAG02734.1| succinyl-CoA synthetase alpha chain [Microcystis aeruginosa NIES-843] Length = 295 Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 87/303 (28%), Positives = 156/303 (51%), Gaps = 24/303 (7%) Query: 6 DKNTKVLVQGLTGKAGTFHTEQAILYCQ-TQVVGGIHPKKGSTYWTGGNV--NVPVFTTV 62 DK+ ++++QG+ G ++ A L Q T +V G+ GG + +PVF V Sbjct: 5 DKD-QIIMQGIDRPLGKYYA--ARLKAQGTCLVAGVASG------CGGEIIAEIPVFDLV 55 Query: 63 AEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 AEA E S+I VPP+ DA +E+I A IP ++ +T G+P LD+V + + Sbjct: 56 AEAVAEAGEIKTSLILVPPNQVLDAALEAIAAAIPQLIIVTPGVPPLDLVELLKIASTTG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 + ++GP G++ P+ +GI + ++ G++G+++R + E + G G+S AV Sbjct: 116 TLILGPGSQGVIIPNYLWLGICEPNFYQSGTIGLITRGDRIGDEVAKTLTAAGYGESMAV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G D + G+ L++F D+ TE+I++V ++GG AE EAA+++ +KP++ Sbjct: 176 NLGTDGIIGSNLSQWLQVFEEDDNTEAILLVSQVGGKAEIEAAKYI----ASAIEKPVIA 231 Query: 242 FVAGKTAPPGRTMGHAGAVISG-------GKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 ++ G A G +IS K +D + +EAG+ + A + SL Sbjct: 232 YLVGLNAGIETNFGDTETIISNQLSYSVAAKNTRKDSLRHFQEAGVTVVEKLADLPASLA 291 Query: 295 ELL 297 ++L Sbjct: 292 KVL 294 >gi|237803499|ref|ZP_04591084.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025481|gb|EGI05537.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. oryzae str. 1_6] Length = 101 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 56/101 (55%), Positives = 74/101 (73%), Gaps = 4/101 (3%) Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 +LF D TE+IVM+GEIGGSAEEEAA ++K KP+V ++AG TAPPG+ MGHA Sbjct: 1 KLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKAHVT----KPVVSYIAGVTAPPGKRMGHA 56 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 57 GAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 97 >gi|147677695|ref|YP_001211910.1| succinyl-CoA synthetase, alpha subunit [Pelotomaculum thermopropionicum SI] gi|146273792|dbj|BAF59541.1| succinyl-CoA synthetase, alpha subunit [Pelotomaculum thermopropionicum SI] Length = 113 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 55/116 (47%), Positives = 81/116 (69%), Gaps = 5/116 (4%) Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GGD V G FIDVL++F D T+++V++GEIGG+AEE A++++K+ +K P+V F Sbjct: 1 MGGDRVVGLTFIDVLKMFEKDPQTKAVVLLGEIGGNAEETASEYIKEMSK-----PVVAF 55 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +AGK+APPG+ MGHAGA+I GKG + K+ A+ AG +A P+ I + E LG Sbjct: 56 IAGKSAPPGKRMGHAGAIIERGKGTYQGKVEALTAAGAKVATLPSEIPALIKEALG 111 >gi|73965863|ref|XP_861010.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 5 [Canis familiaris] Length = 1085 Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 476 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 535 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 536 VFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKLIK 595 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 596 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 655 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 656 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 715 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 716 KE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYVP 771 Query: 284 PSPARIG 290 PS +G Sbjct: 772 PSFDELG 778 >gi|119114534|ref|XP_319323.3| AGAP010156-PA [Anopheles gambiae str. PEST] gi|116118462|gb|EAA13829.3| AGAP010156-PA [Anopheles gambiae str. PEST] Length = 1082 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 91/311 (29%), Positives = 144/311 (46%), Gaps = 26/311 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 + TK +V G+ +A H ++ + G H +K YW V +PV++ ++ Sbjct: 484 MFSNRTKAIVWGMQTRA--VHRDEPSVVAMVYPFTGYHRQK--FYWGHKEVLIPVYSKMS 539 Query: 64 EA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKARLEKSS 121 EA + A+ V + A D+ +E ++ +I I I EGIP ++ + + Sbjct: 540 EAINKHKEADVLVNFASLRSAYDSSVEVLDYPQIRTIAIIAEGIPENLTRKLNMAARERN 599 Query: 122 SRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +IGP G + P KIG I+ ++R GSV +SRSG ++ E S Sbjct: 600 VAIIGPATVGGVKPGCFKIGNTGGMLDNIIHSKLYRAGSVAYVSRSGGMSNELNNILSLT 659 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G V IGGD GT F+D + + AD A + IV++GE+GG E E + LKD Sbjct: 660 TDGVYEGVAIGGDRYPGTTFMDHIMRYQADPAAKMIVLLGEVGGVEEYEVCEALKD---- 715 Query: 234 GR-KKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 GR KP++ + G A GHAG+ + + A K A+ EAG + S Sbjct: 716 GRITKPLIAWCIGTCAGMFTSEVQFGHAGSCANSDRETASAKNKALAEAGAHVPASFDAF 775 Query: 290 GRSLVELLGSL 300 G +++GS+ Sbjct: 776 G----DMIGSV 782 >gi|73965865|ref|XP_861037.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 6 [Canis familiaris] Length = 1088 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 479 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 538 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 539 VFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKLIK 598 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 599 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 658 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 659 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 718 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 719 KE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYVP 774 Query: 284 PSPARIG 290 PS +G Sbjct: 775 PSFDELG 781 >gi|73965881|ref|XP_861266.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 14 [Canis familiaris] Length = 1101 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 492 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 551 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 552 VFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKLIK 611 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 612 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 671 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 672 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 731 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 732 KE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYVP 787 Query: 284 PSPARIG 290 PS +G Sbjct: 788 PSFDELG 794 >gi|73965867|ref|XP_861064.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 7 [Canis familiaris] Length = 1103 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 494 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 553 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 554 VFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKLIK 613 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 614 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 673 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 674 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 733 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 734 KE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYVP 789 Query: 284 PSPARIG 290 PS +G Sbjct: 790 PSFDELG 796 >gi|73965879|ref|XP_861238.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 13 [Canis familiaris] Length = 1094 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 485 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 544 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 545 VFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKLIK 604 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 605 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 664 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 665 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 724 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 725 KE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYVP 780 Query: 284 PSPARIG 290 PS +G Sbjct: 781 PSFDELG 787 >gi|73965861|ref|XP_860980.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 4 [Canis familiaris] Length = 1089 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 480 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 539 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 540 VFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKLIK 599 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 659 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 660 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 719 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 720 KE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYVP 775 Query: 284 PSPARIG 290 PS +G Sbjct: 776 PSFDELG 782 >gi|73965883|ref|XP_861298.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 15 [Canis familiaris] Length = 1091 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 482 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 541 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 542 VFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKLIK 601 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 602 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 661 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 662 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 721 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 722 KE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYVP 777 Query: 284 PSPARIG 290 PS +G Sbjct: 778 PSFDELG 784 >gi|73965873|ref|XP_861149.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 10 [Canis familiaris] Length = 1087 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 478 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 537 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 538 VFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKLIK 597 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 598 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 657 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 658 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 717 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 718 KE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYVP 773 Query: 284 PSPARIG 290 PS +G Sbjct: 774 PSFDELG 780 >gi|73965877|ref|XP_861212.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 12 [Canis familiaris] Length = 1111 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 502 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 561 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 562 VFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKLIK 621 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 622 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 681 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 682 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 741 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 742 KE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYVP 797 Query: 284 PSPARIG 290 PS +G Sbjct: 798 PSFDELG 804 >gi|73965857|ref|XP_850198.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 2 [Canis familiaris] gi|73965885|ref|XP_861323.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 16 [Canis familiaris] gi|73965887|ref|XP_861351.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 17 [Canis familiaris] Length = 1101 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 492 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 551 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 552 VFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKLIK 611 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 612 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 671 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 672 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 731 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 732 KE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYVP 787 Query: 284 PSPARIG 290 PS +G Sbjct: 788 PSFDELG 794 >gi|73965869|ref|XP_861090.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 8 [Canis familiaris] Length = 1089 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 480 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 539 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 540 VFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKLIK 599 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 659 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 660 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 719 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 720 KE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYVP 775 Query: 284 PSPARIG 290 PS +G Sbjct: 776 PSFDELG 782 >gi|73965871|ref|XP_861122.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 9 [Canis familiaris] Length = 1095 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 486 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 545 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 546 VFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKLIK 605 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 606 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 665 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 666 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 725 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 726 KE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYVP 781 Query: 284 PSPARIG 290 PS +G Sbjct: 782 PSFDELG 788 >gi|73965875|ref|XP_861179.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 11 [Canis familiaris] Length = 1097 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 488 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 547 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 548 VFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKLIK 607 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 608 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 667 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 668 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 727 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 728 KE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYVP 783 Query: 284 PSPARIG 290 PS +G Sbjct: 784 PSFDELG 790 >gi|73965859|ref|XP_860955.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 3 [Canis familiaris] Length = 951 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 89/309 (28%), Positives = 145/309 (46%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 490 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A K+ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 550 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KP+V + G A + GHAGA + A K A+KEAG+ Sbjct: 730 GIKE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVY 785 Query: 282 IAPSPARIG 290 + PS +G Sbjct: 786 VPPSFDELG 794 >gi|301773523|ref|XP_002922169.1| PREDICTED: ATP-citrate synthase-like [Ailuropoda melanoleuca] Length = 1101 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 88/307 (28%), Positives = 144/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 492 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 551 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 552 VFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKLIK 611 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 612 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 671 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 672 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 731 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 ++ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 732 QE----GRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVP 787 Query: 284 PSPARIG 290 PS +G Sbjct: 788 PSFDELG 794 >gi|281344523|gb|EFB20107.1| hypothetical protein PANDA_011141 [Ailuropoda melanoleuca] Length = 1086 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 88/307 (28%), Positives = 144/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 492 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 551 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 552 VFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKLIK 611 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 612 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 671 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 672 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 731 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 ++ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 732 QE----GRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVP 787 Query: 284 PSPARIG 290 PS +G Sbjct: 788 PSFDELG 794 >gi|167518137|ref|XP_001743409.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778508|gb|EDQ92123.1| predicted protein [Monosiga brevicollis MX1] Length = 1085 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 97/322 (30%), Positives = 143/322 (44%), Gaps = 34/322 (10%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAIL---YC----QTQVVGGIHPKKGST----YWTGG 52 L T+ L G+ +A Q +L +C + V G I+P G+ YW Sbjct: 470 LFTNKTRALFFGMQPRAA-----QGMLDFDFCCGREEPSVAGMIYPFSGNHSQKFYWGSN 524 Query: 53 NVNVPVFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDM 110 V +PVF + EA ER + + + A ++ +E++E +I +I I EGIP Sbjct: 525 EVLIPVFQQMGEAMERHPDVDVLINFASFRSAYESTLEALEYPQIKVIAIIAEGIPEHLT 584 Query: 111 VRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTL 162 ++ + +IGP G + P KIG I+ ++R GSV +SRSG + Sbjct: 585 RKLIKVAQAKGVTIIGPATVGGIKPGCFKIGNTGGMIDNIISSKLYRPGSVAYVSRSGGM 644 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 + E S+ G V IGGD G+ FID L F D + +V++GE+GG E E Sbjct: 645 SNELNNIISRNTNGVYEGVAIGGDRYPGSVFIDHLFRFQDDPEVKMMVLLGEVGGVEEYE 704 Query: 223 AAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEA 278 + + GR KPIV + G + GHAGA + A K A+KEA Sbjct: 705 ICRAIAS----GRLNKPIVAWCIGTCGSMFTSEVQFGHAGACANSDMETAVAKNKALKEA 760 Query: 279 GICIAPSPARIGRSLVELLGSL 300 G + PS +G L E L Sbjct: 761 GAIVPPSFDSLGDVLKETYDRL 782 >gi|115621242|ref|XP_791999.2| PREDICTED: similar to ATP citrate lyase [Strongylocentrotus purpuratus] gi|115925081|ref|XP_001197442.1| PREDICTED: similar to ATP citrate lyase [Strongylocentrotus purpuratus] Length = 1042 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 91/323 (28%), Positives = 145/323 (44%), Gaps = 36/323 (11%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L TK + G+ +A G + + + VVG I+P K YW + +P Sbjct: 432 LFTNTTKSFIFGMQPRAVQGMLDFDHSCRRDEPSVVGMIYPFSGDHKQKFYWGHKEILIP 491 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIP------VLD 109 V+ ++A+A K + + + A D+ +E + +I I I EGIP ++D Sbjct: 492 VYKSMAKAMKTHPDVDVVINFASLRSAYDSTVEVLTYPQIKTIAIIAEGIPENKTRILID 551 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGT 161 M K S +IGP G + P KIG I+ ++R GSV +SRSG Sbjct: 552 MA------NKKSVTIIGPATVGGIKPGCFKIGNTGGMLDNILSSKLYRPGSVSYVSRSGG 605 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 ++ E S+ G V IGGD GT F+D + + D + +VM+GE+GG+ E Sbjct: 606 MSNELNNIISRNADGVYEGVAIGGDRYPGTTFLDHILRYHDDPEVKMLVMLGEVGGTEEY 665 Query: 222 EAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKE 277 E ++ GR KP+V + G + + GHAGA +G + + K A++ Sbjct: 666 EVCSAIES----GRITKPMVAWCIGTCSTMFTSEVQFGHAGACANGERETSSAKNQALRV 721 Query: 278 AGICIAPSPARIGRSLVELLGSL 300 AG + S +G + E+ L Sbjct: 722 AGAYVPGSFDDLGDKIAEIFQGL 744 >gi|126307956|ref|XP_001364262.1| PREDICTED: similar to ATP citrate lyase isoform 2 [Monodelphis domestica] Length = 1091 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 88/309 (28%), Positives = 142/309 (45%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 480 TTLFSRHTKAIVWGMQTRAVQGMLDFDYICSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 539 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A K+ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 540 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKKADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + Q Sbjct: 660 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICQ 719 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 K GR KP+V + G A + GHAGA + A K A+KEAG+ Sbjct: 720 ----SVKEGRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 775 Query: 282 IAPSPARIG 290 + S +G Sbjct: 776 VPWSFDELG 784 >gi|126307954|ref|XP_001364183.1| PREDICTED: similar to ATP citrate lyase isoform 1 [Monodelphis domestica] Length = 1101 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 88/309 (28%), Positives = 144/309 (46%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 490 TTLFSRHTKAIVWGMQTRAVQGMLDFDYICSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A K+ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 550 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + Q Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICQ 729 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KP+V + G A + GHAGA + A K A+KEAG+ Sbjct: 730 SVKE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 785 Query: 282 IAPSPARIG 290 + S +G Sbjct: 786 VPWSFDELG 794 >gi|157427728|ref|NP_001098772.1| ATP citrate lyase [Sus scrofa] gi|156140098|gb|ABU51323.1| ATP citrate lyase [Sus scrofa] Length = 1076 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 88/307 (28%), Positives = 143/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 482 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 541 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 542 VFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIK 601 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + E+ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 602 KAEQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 661 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 662 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 721 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 722 KE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAIAKNQALKEAGVFVP 777 Query: 284 PSPARIG 290 S +G Sbjct: 778 RSFDELG 784 >gi|331220513|ref|XP_003322932.1| ATP-citrate synthase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301922|gb|EFP78513.1| ATP-citrate synthase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1145 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 89/297 (29%), Positives = 137/297 (46%), Gaps = 24/297 (8%) Query: 6 DKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVNVPVF 59 D+ T+ LV GL +A G + A + V I+P G YW +PV+ Sbjct: 530 DETTRGLVYGLQPRAIQGMLDFDFACGRKKPSVAAMIYPFGGHHVQKFYWGTKETLLPVY 589 Query: 60 TTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARL 117 T+AEA K+ A+ V + + ++++E +I I I EG+P + Sbjct: 590 ATIAEAVKKHPEADTLVNFSSSRSVYQSTLDALEIPQIKSIALIAEGVPERHAREILHLA 649 Query: 118 EKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 EK +IGP G + P +IG I+ ++R GSV +S+SG ++ E Sbjct: 650 EKKKVIIIGPATVGGIKPGCFRIGNTGGMMDNIISSKLYRPGSVAYVSKSGGMSNELNNI 709 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 S G + IGGD GT FID + + AD + +V++GE+GG E + +K Sbjct: 710 LSLTTNGTYEGIAIGGDRYPGTTFIDHMLRYEADPNCKMLVLLGEVGGVEEYRVIEAVKS 769 Query: 230 EAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 G+ KKPIV + G A T GHAG++ + G A+ K AM+ AG + Sbjct: 770 ----GQIKKPIVAWAIGTCAKMFTTEVQFGHAGSMANSDLGTADAKNKAMRAAGFIV 822 >gi|148670608|gb|EDL02555.1| ATP citrate lyase, isoform CRA_a [Mus musculus] Length = 1102 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 493 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 552 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 553 VFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIK 612 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 613 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 672 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 673 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 732 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 733 KE----GRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVP 788 Query: 284 PSPARIG 290 S +G Sbjct: 789 RSFDELG 795 >gi|313151222|ref|NP_001186225.1| ATP-citrate synthase isoform 1 [Mus musculus] gi|74210124|dbj|BAE21336.1| unnamed protein product [Mus musculus] gi|123231524|emb|CAM27800.1| ATP citrate lyase [Mus musculus] gi|123236002|emb|CAM23024.1| ATP citrate lyase [Mus musculus] Length = 1101 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 492 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 551 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 552 VFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIK 611 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 612 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 671 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 672 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 731 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 732 KE----GRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVP 787 Query: 284 PSPARIG 290 S +G Sbjct: 788 RSFDELG 794 >gi|162287306|ref|NP_058683.2| ATP-citrate synthase isoform 1 [Rattus norvegicus] gi|149054225|gb|EDM06042.1| ATP citrate lyase, isoform CRA_a [Rattus norvegicus] Length = 1101 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 492 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 551 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 552 VFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIK 611 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 612 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 671 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 672 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 731 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 732 KE----GRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVP 787 Query: 284 PSPARIG 290 S +G Sbjct: 788 RSFDELG 794 >gi|119581184|gb|EAW60780.1| ATP citrate lyase, isoform CRA_c [Homo sapiens] Length = 628 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/309 (28%), Positives = 144/309 (46%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 17 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 76 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 77 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 136 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 137 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 196 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 197 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 256 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KPIV + G A + GHAGA + A K A+KEAG+ Sbjct: 257 GIKE----GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 312 Query: 282 IAPSPARIG 290 + S +G Sbjct: 313 VPRSFDELG 321 >gi|17028103|gb|AAL34316.1| ATP-citrate lyase [Rattus norvegicus] Length = 851 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 242 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 301 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 302 VFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIK 361 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 362 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 421 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 422 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 481 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 482 KE----GRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVP 537 Query: 284 PSPARIG 290 S +G Sbjct: 538 RSFDELG 544 >gi|194380758|dbj|BAG58532.1| unnamed protein product [Homo sapiens] Length = 1145 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/309 (28%), Positives = 144/309 (46%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 534 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 593 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 594 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 653 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 654 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 713 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 714 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 773 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KPIV + G A + GHAGA + A K A+KEAG+ Sbjct: 774 GIKE----GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 829 Query: 282 IAPSPARIG 290 + S +G Sbjct: 830 VPRSFDELG 838 >gi|195425586|ref|XP_002061078.1| GK10643 [Drosophila willistoni] gi|194157163|gb|EDW72064.1| GK10643 [Drosophila willistoni] Length = 1095 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/318 (27%), Positives = 145/318 (45%), Gaps = 26/318 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ---VVGGIHP----KKGSTYWTGGNVNV 56 TK +V G+ +A + + C+ VV ++P K YW + + Sbjct: 487 FFSNTTKAIVWGMQQRAVQSMLDFDFI-CRRDEPSVVAMVYPFTGDHKQKYYWGHKEILI 545 Query: 57 PVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVK 114 PV+ +++A + + V + A ++ +E +E EI + I EGIP ++ Sbjct: 546 PVYKKMSDAIHKHKEVDVMVNFASMRSAYESTLEVLEFPEIRTVAIIAEGIPENMTRKLI 605 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 606 IEADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNEL 665 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + Sbjct: 666 NNIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAA 725 Query: 227 LKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 LKD GR KP+V + G A + GHAG+ + + A K +++EAG + Sbjct: 726 LKD----GRITKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKSLREAGAYV 781 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 782 PDSFDTLGELIHSVYGEL 799 >gi|194388336|dbj|BAG65552.1| unnamed protein product [Homo sapiens] Length = 830 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/309 (28%), Positives = 144/309 (46%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 219 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 278 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 279 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 338 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 339 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 398 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 399 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 458 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KPIV + G A + GHAGA + A K A+KEAG+ Sbjct: 459 GIKE----GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 514 Query: 282 IAPSPARIG 290 + S +G Sbjct: 515 VPRSFDELG 523 >gi|71680955|gb|AAI00619.1| Acly protein [Rattus norvegicus] Length = 1091 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 482 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 541 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 542 VFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIK 601 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 602 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 661 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 662 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 721 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 722 KE----GRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVP 777 Query: 284 PSPARIG 290 S +G Sbjct: 778 RSFDELG 784 >gi|74204023|dbj|BAE29010.1| unnamed protein product [Mus musculus] Length = 1034 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 492 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 551 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 552 VFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIK 611 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 612 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 671 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 672 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 731 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 732 KE----GRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVP 787 Query: 284 PSPARIG 290 S +G Sbjct: 788 RSFDELG 794 >gi|113116|sp|P16638|ACLY_RAT RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme gi|203490|gb|AAA74463.1| ATP citrate-lyase [Rattus norvegicus] Length = 1100 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 491 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 550 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 551 VFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIK 610 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 611 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 670 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 671 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 730 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 731 KE----GRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVP 786 Query: 284 PSPARIG 290 S +G Sbjct: 787 RSFDELG 793 >gi|603074|gb|AAB60340.1| ATP:citrate lyase [Homo sapiens] Length = 1101 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/309 (28%), Positives = 144/309 (46%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 490 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 550 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KPIV + G A + GHAGA + A K A+KEAG+ Sbjct: 730 GIKE----GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 785 Query: 282 IAPSPARIG 290 + S +G Sbjct: 786 VPRSFDELG 794 >gi|149723800|ref|XP_001495733.1| PREDICTED: ATP citrate lyase isoform 2 [Equus caballus] Length = 1091 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 482 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 541 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 542 VFKNMADAMKKHPEVDVLISFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKLIK 601 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 602 KADQRGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 661 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 662 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 721 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 ++ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 722 QE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVP 777 Query: 284 PSPARIG 290 S +G Sbjct: 778 RSFDELG 784 >gi|149723798|ref|XP_001495696.1| PREDICTED: ATP citrate lyase isoform 1 [Equus caballus] Length = 1101 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 492 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 551 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 552 VFKNMADAMKKHPEVDVLISFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKLIK 611 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 612 KADQRGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 671 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 672 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 731 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 ++ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 732 QE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVP 787 Query: 284 PSPARIG 290 S +G Sbjct: 788 RSFDELG 794 >gi|38569421|ref|NP_001087.2| ATP-citrate synthase isoform 1 [Homo sapiens] gi|116241237|sp|P53396|ACLY_HUMAN RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate (pro-S-)-lyase; Short=ACL; AltName: Full=Citrate cleavage enzyme gi|13623199|gb|AAH06195.1| ATP citrate lyase [Homo sapiens] gi|119581183|gb|EAW60779.1| ATP citrate lyase, isoform CRA_b [Homo sapiens] gi|119581185|gb|EAW60781.1| ATP citrate lyase, isoform CRA_b [Homo sapiens] gi|168270894|dbj|BAG10240.1| ATP-citrate synthase [synthetic construct] gi|325463509|gb|ADZ15525.1| ATP citrate lyase [synthetic construct] Length = 1101 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/309 (28%), Positives = 144/309 (46%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 490 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 550 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KPIV + G A + GHAGA + A K A+KEAG+ Sbjct: 730 GIKE----GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 785 Query: 282 IAPSPARIG 290 + S +G Sbjct: 786 VPRSFDELG 794 >gi|74146613|dbj|BAE41315.1| unnamed protein product [Mus musculus] Length = 1091 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 482 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 541 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 542 VFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIK 601 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 602 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 661 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 662 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 721 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 722 KE----GRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVP 777 Query: 284 PSPARIG 290 S +G Sbjct: 778 RSFDELG 784 >gi|194756204|ref|XP_001960369.1| GF13329 [Drosophila ananassae] gi|190621667|gb|EDV37191.1| GF13329 [Drosophila ananassae] Length = 1097 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 85/313 (27%), Positives = 147/313 (46%), Gaps = 24/313 (7%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHP----KKGSTYWTGGNVNVPVFTT 61 +TK +V G+ +A + + +++ VV ++P K YW + +PV+ Sbjct: 493 STKAIVWGMQQRAVQSMLDFDFICRRSEPSVVAMVYPFTGDHKQKYYWGHKEILIPVYKK 552 Query: 62 VAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARLEK 119 +++A + + V + A ++ +E +E +I + I EGIP ++ +K Sbjct: 553 MSDAIHKHKEVDVMVNFASMRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLIIEADK 612 Query: 120 SSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 +IGP G + P KIG I+ ++R GSV +SRSG ++ E S Sbjct: 613 KGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELNNIIS 672 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + LKD Sbjct: 673 KATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAALKD-- 730 Query: 232 KRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 GR KP+V + G A + GHAG+ + + A K A+++AG + S Sbjct: 731 --GRITKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKALRDAGAYVPDSFD 788 Query: 288 RIGRSLVELLGSL 300 +G + + G L Sbjct: 789 TLGELIHHVYGEL 801 >gi|21754275|dbj|BAC04484.1| unnamed protein product [Homo sapiens] Length = 701 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/309 (28%), Positives = 144/309 (46%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 90 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 149 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 150 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 209 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 210 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 269 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 270 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 329 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KPIV + G A + GHAGA + A K A+KEAG+ Sbjct: 330 GIKE----GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 385 Query: 282 IAPSPARIG 290 + S +G Sbjct: 386 VPRSFDELG 394 >gi|29293809|ref|NP_598798.1| ATP-citrate synthase isoform 2 [Mus musculus] gi|21263374|sp|Q91V92|ACLY_MOUSE RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme gi|14193670|gb|AAK56080.1|AF332051_1 ATP citrate lyase [Mus musculus] gi|14193672|gb|AAK56081.1|AF332052_1 ATP citrate lyase [Mus musculus] gi|38614162|gb|AAH56378.1| ATP citrate lyase [Mus musculus] gi|123231523|emb|CAM27799.1| ATP citrate lyase [Mus musculus] gi|123236003|emb|CAM23025.1| ATP citrate lyase [Mus musculus] gi|148670609|gb|EDL02556.1| ATP citrate lyase, isoform CRA_b [Mus musculus] Length = 1091 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 482 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 541 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 542 VFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIK 601 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 602 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 661 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 662 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 721 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 722 KE----GRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVP 777 Query: 284 PSPARIG 290 S +G Sbjct: 778 RSFDELG 784 >gi|312370903|gb|EFR19206.1| hypothetical protein AND_22915 [Anopheles darlingi] Length = 891 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 86/276 (31%), Positives = 132/276 (47%), Gaps = 23/276 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIP 96 GI+ K+ YW V +PV+ ++EA + A+ V + A D+ +E ++ +I Sbjct: 325 GIYHKQ-KFYWGHKEVLIPVYAKMSEAIGKHKDADVLVNFASLRSAYDSSMEVLDYPQIR 383 Query: 97 LIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIF 148 I I EGIP ++ + +IGP G L P KIG I+ ++ Sbjct: 384 TIAIIAEGIPENLTRKLNMAARERQVSIIGPATVGGLKPGCFKIGNTGGMLDNIIHSKLY 443 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 R GSV +SRSG ++ E S+ G V IGGD GT F+D + + AD A + Sbjct: 444 RAGSVAYVSRSGGMSNELNNIVSRTTDGVYEGVAIGGDRYPGTTFMDHILRYQADPAAKM 503 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGG 264 IV++GE+GG E E LKD GR KP+V + G A + GHAG+ + Sbjct: 504 IVLLGEVGGVEEYEVCDALKD----GRITKPLVAWCIGTCASMFTSEVQFGHAGSCANSD 559 Query: 265 KGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 + A K A++ AG + S +G +++GS+ Sbjct: 560 RETASAKNRALETAGAHVPDSFDTLG----DMIGSV 591 >gi|68533125|dbj|BAE06117.1| ACLY variant protein [Homo sapiens] Length = 1137 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/309 (28%), Positives = 144/309 (46%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 526 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 585 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 586 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 645 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 646 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 705 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 706 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 765 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KPIV + G A + GHAGA + A K A+KEAG+ Sbjct: 766 GIKE----GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 821 Query: 282 IAPSPARIG 290 + S +G Sbjct: 822 VPRSFDELG 830 >gi|161760632|ref|NP_001104565.1| ATP-citrate synthase isoform 2 [Rattus norvegicus] gi|149054226|gb|EDM06043.1| ATP citrate lyase, isoform CRA_b [Rattus norvegicus] Length = 1091 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 482 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 541 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 542 VFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIK 601 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 602 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 661 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 662 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 721 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 722 KE----GRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVP 777 Query: 284 PSPARIG 290 S +G Sbjct: 778 RSFDELG 784 >gi|38569423|ref|NP_942127.1| ATP-citrate synthase isoform 2 [Homo sapiens] gi|119581181|gb|EAW60777.1| ATP citrate lyase, isoform CRA_a [Homo sapiens] gi|119581182|gb|EAW60778.1| ATP citrate lyase, isoform CRA_a [Homo sapiens] Length = 1091 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/309 (28%), Positives = 144/309 (46%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 480 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 539 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 540 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KPIV + G A + GHAGA + A K A+KEAG+ Sbjct: 720 GIKE----GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 775 Query: 282 IAPSPARIG 290 + S +G Sbjct: 776 VPRSFDELG 784 >gi|298508702|pdb|3MWE|B Chain B, Truncated Human Atp-Citrate Lyase With Tartrate Bound Length = 335 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 87/309 (28%), Positives = 144/309 (46%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 4 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 63 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 64 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 123 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 124 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 183 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 184 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 243 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KPIV + G A + GHAGA + A K A+KEAG+ Sbjct: 244 GIKE----GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 299 Query: 282 IAPSPARIG 290 + S +G Sbjct: 300 VPRSFDELG 308 >gi|332847769|ref|XP_511495.3| PREDICTED: ATP-citrate synthase [Pan troglodytes] Length = 1041 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 87/309 (28%), Positives = 144/309 (46%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 490 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 550 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGAEEYKICR 729 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KPIV + G A + GHAGA + A K A+KEAG+ Sbjct: 730 GIKE----GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 785 Query: 282 IAPSPARIG 290 + S +G Sbjct: 786 VPRSFDELG 794 >gi|149370451|ref|ZP_01890140.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [unidentified eubacterium SCB49] gi|149356002|gb|EDM44559.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [unidentified eubacterium SCB49] Length = 97 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 48/99 (48%), Positives = 67/99 (67%), Gaps = 3/99 (3%) Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 + + D TE++VM+GEIGG E +AA + K+ G KKP++GF+AG+TAP GRTMGHAG Sbjct: 1 MLVNDPETEAVVMIGEIGGQLEADAALWYKN---SGSKKPVIGFIAGETAPAGRTMGHAG 57 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 A++ G A+ K M E GI + SPA IG+ + E+L Sbjct: 58 AIVGGADDTAQAKKKIMSECGIHVVDSPAEIGKKVAEVL 96 >gi|213419318|ref|ZP_03352384.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 89 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 50/92 (54%), Positives = 68/92 (73%), Gaps = 4/92 (4%) Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK 265 TE+IVM+GEIGGSAEEEAA ++KD KP+VG++AG TAP G+ MGHAGA+I+GGK Sbjct: 1 TEAIVMIGEIGGSAEEEAAAYIKDHVT----KPVVGYIAGVTAPKGKRMGHAGAIIAGGK 56 Query: 266 GGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G A++K A++ AG+ S A IG +L ++ Sbjct: 57 GTADEKFAALEAAGVKTVRSLADIGEALKAII 88 >gi|260814543|ref|XP_002601974.1| hypothetical protein BRAFLDRAFT_98927 [Branchiostoma floridae] gi|229287278|gb|EEN57986.1| hypothetical protein BRAFLDRAFT_98927 [Branchiostoma floridae] Length = 1097 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 86/316 (27%), Positives = 142/316 (44%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L +N+K ++ G+ +A G + VV +P K YW + +P Sbjct: 488 LFTENSKAIIWGMQNRAVQGMLDFDFCCSRKTPSVVAMTYPFSGDHKQKFYWGHKEILIP 547 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ + +A + T A+ + + A D+ +E+++ ++I I I EGIP ++ Sbjct: 548 VYKNMDDAMTKHTDADVLISFASLRSAYDSTVEALQYSQIRTIAIIAEGIPEAKTRQLNK 607 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 608 LASEKGVTVIGPATVGGIKPGCFKIGNTGGMLDNILSSKLYRPGSVAYVSRSGGMSNELN 667 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD GT F+D L + +D + +V++GE+GG+ E + + L Sbjct: 668 NIISRRTNGVYEGVAIGGDRYPGTTFMDHLIRYNSDPDVKMMVLLGEVGGTEEYKICEAL 727 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KPIV + G A + GHAG+ A K A++ AG + Sbjct: 728 KDGTI---TKPIVAWCIGTCASMFTSEVQFGHAGSSAHSDMETALAKNKALETAGAYVPT 784 Query: 285 SPARIGRSLVELLGSL 300 S +G + E+ L Sbjct: 785 SFDELGEKIQEVYEFL 800 >gi|195121624|ref|XP_002005320.1| GI20417 [Drosophila mojavensis] gi|193910388|gb|EDW09255.1| GI20417 [Drosophila mojavensis] Length = 1097 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 85/318 (26%), Positives = 144/318 (45%), Gaps = 26/318 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ---VVGGIHP----KKGSTYWTGGNVNV 56 TK +V G+ +A + + C+ VV ++P K YW + + Sbjct: 489 FFSNTTKAIVWGMQQRAVQSMLDFDFI-CRRDEPSVVAMVYPFTGDHKQKYYWGHKEILI 547 Query: 57 PVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVK 114 PV+ +++A + + V + A D+ +E +E +I + I EGIP ++ Sbjct: 548 PVYKKMSDAIHKHKEVDVMVNFASLRSAYDSTLEVLEFPQIRTVAIIAEGIPENMTRKLI 607 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 608 VEANKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNEL 667 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 S+ G + IGGD G+ F+D + + +D T+ +V++GE+GG+ E + Sbjct: 668 NNIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQSDPETKLLVLLGEVGGTEEYDVCAA 727 Query: 227 LKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 +KD GR KP+V + G A + GHAG+ + + A K A++EAG + Sbjct: 728 IKD----GRITKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKALREAGAYV 783 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 784 PDSFDTLGELIHHVYGEL 801 >gi|328849140|gb|EGF98326.1| hypothetical protein MELLADRAFT_46071 [Melampsora larici-populina 98AG31] Length = 1145 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 86/296 (29%), Positives = 135/296 (45%), Gaps = 22/296 (7%) Query: 6 DKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVNVPVF 59 D+NT+ LV GL +A G + A + V I+P G YW +PV+ Sbjct: 530 DENTRGLVYGLQPRAIQGMLDFDFACGRTKPSVAAMIYPFGGHHVQKFYWGTKETLLPVY 589 Query: 60 TTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARL 117 T+AEA K+ A+ V + + +E++E ++ I I EG+P + Sbjct: 590 ATIAEAVKKHPDADTLVNFSSSRSVYQSTLEALELPQLKSIALIAEGVPERHARAILHLA 649 Query: 118 EKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 +K +IGP G + P +IG I+ ++R GSV +S+SG ++ E Sbjct: 650 QKKKVIIIGPATVGGIKPGCFRIGNTGGMMDNIIASKLYRPGSVAYVSKSGGMSNELNNI 709 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 S G + IGGD GT FID + + AD + +V++GE+GG E + +K Sbjct: 710 LSLTTNGTYEGIAIGGDRYPGTTFIDHMLRYEADPNCKMLVLLGEVGGVEEYRVIEAVKA 769 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 KKPI+ + G A T GHAG++ + A+ K AM+ AG + Sbjct: 770 GTI---KKPIIAWAIGTCAKMFTTEVQFGHAGSMANSDLETADAKNRAMRAAGFVV 822 >gi|148222521|ref|NP_001088255.1| ATP citrate lyase [Xenopus laevis] gi|54038148|gb|AAH84253.1| LOC495086 protein [Xenopus laevis] Length = 1091 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 88/309 (28%), Positives = 142/309 (45%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 480 TTLFTRHTKSIVWGMQTRAVQGMLDFDYICSRSEPSVAALVYPFTGDHKQKFYWGHKEIL 539 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ +I I I EGIP ++ Sbjct: 540 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTIETMHYPQIRAIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKMADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVFEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KD GR KPIV + G A + GHAGA + A K A+KEAG+ Sbjct: 720 GIKD----GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 775 Query: 282 IAPSPARIG 290 + S +G Sbjct: 776 VPRSFDELG 784 >gi|296202905|ref|XP_002748671.1| PREDICTED: ATP-citrate synthase [Callithrix jacchus] Length = 1091 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 86/307 (28%), Positives = 142/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 482 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 541 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A ++ + + + A D+ +E++ +I I I EGIP ++ Sbjct: 542 VFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYTQIRTIAIIAEGIPEALTRKLIK 601 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 602 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 661 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 662 NIISRTTDGVFEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 721 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ GR KPIV + G A + GHAGA + A K A+KEAG+ + Sbjct: 722 KE----GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVP 777 Query: 284 PSPARIG 290 S +G Sbjct: 778 QSFDELG 784 >gi|71004972|ref|XP_757152.1| hypothetical protein UM01005.1 [Ustilago maydis 521] gi|46096782|gb|EAK82015.1| hypothetical protein UM01005.1 [Ustilago maydis 521] Length = 1152 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 87/296 (29%), Positives = 133/296 (44%), Gaps = 22/296 (7%) Query: 6 DKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVNVPVF 59 D NT+ LV GL +A G + + V I+P G YW +PV+ Sbjct: 539 DANTRSLVFGLQPRAIQGMLDFDFSCGRKTPSVAAMIYPFGGHHIQKFYWGTKETLLPVY 598 Query: 60 TTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKARL 117 T++ EA + A+ V + + +E ++ +I + I EG+P + R Sbjct: 599 TSIKEAVAKHPDADVVVNFASSRSVYSSTLEVLDCPQIRALALIAEGVPERHAREILHRA 658 Query: 118 EKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 EK+ +IGP G + P +IG I+ ++R GSVG +S+SG ++ E Sbjct: 659 EKAGVLIIGPATVGGIKPGCFRIGNSGGMMDNILASKLYRPGSVGYVSKSGGMSNELNNI 718 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 S G + IGGD GT FID L + D + +V++GE+GG E + +K Sbjct: 719 LSITTNGTYEGIAIGGDRYPGTTFIDHLLRYEQDPECKMLVLLGEVGGIEEYRVIEAVK- 777 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 K KKPI+ + G A T GHAG++ + A K AMK AG + Sbjct: 778 --KGTIKKPIIAWAIGTCAKMFTTEVQFGHAGSMANSDMETASAKNAAMKAAGFIV 831 >gi|71051157|gb|AAH99037.1| LOC495086 protein [Xenopus laevis] Length = 697 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 88/309 (28%), Positives = 142/309 (45%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 86 TTLFTRHTKSIVWGMQTRAVQGMLDFDYICSRSEPSVAALVYPFTGDHKQKFYWGHKEIL 145 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ +I I I EGIP ++ Sbjct: 146 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTIETMHYPQIRAIAIIAEGIPEALTRKL 205 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 206 IKMADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 265 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 266 LNNIISRTTDGVFEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 325 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KD GR KPIV + G A + GHAGA + A K A+KEAG+ Sbjct: 326 GIKD----GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 381 Query: 282 IAPSPARIG 290 + S +G Sbjct: 382 VPRSFDELG 390 >gi|291237585|ref|XP_002738714.1| PREDICTED: acly protein-like [Saccoglossus kowalevskii] Length = 1092 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 91/318 (28%), Positives = 143/318 (44%), Gaps = 26/318 (8%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L K+TK +V G+ +A G + + VV ++P K YW + +P Sbjct: 485 LFSKHTKAMVWGMQPRAVQGMLDFDYVCQRSKPSVVCMVYPFSGDHKQKFYWGHKEILIP 544 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 ++ ++A A K + + + A ++ +E+++ +I I I EGIP + R+ Sbjct: 545 LYKSMANAIKNHPGVDTMINFASLRSAYESTVEAMQFPQIRSITNIAEGIPE-NKTRLLN 603 Query: 116 RLEKSSS-RLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 ++ K + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 604 KIAKEKNVSIIGPATVGGIKPGCFKIGNTGGMLDNILSSKLYRPGSVAYVSRSGGMSNEL 663 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 S+ G V IGGD GT FID + + D + IV++GE+GG E E Sbjct: 664 NNIISRNTNGVYEGVAIGGDRYPGTVFIDHVLRYQDDHNIKMIVLLGEVGGVEEYEICS- 722 Query: 227 LKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 + + GR KPIV + G A + GHAGA A K A+ AG + Sbjct: 723 ---QIENGRITKPIVAWCIGTCATMFTSEVQFGHAGACAQAEAETARAKNKALAVAGAYV 779 Query: 283 APSPARIGRSLVELLGSL 300 S IG + E+ L Sbjct: 780 PNSFDDIGDKIKEVYEQL 797 >gi|321461384|gb|EFX72417.1| hypothetical protein DAPPUDRAFT_308310 [Daphnia pulex] Length = 1074 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 86/297 (28%), Positives = 134/297 (45%), Gaps = 26/297 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ---VVGGIHP----KKGSTYWTGGNVNV 56 L TK +V G+ +A + + C+ + V ++P K YW G V + Sbjct: 465 LFTSETKAIVWGMQTRAVQSMLDFDFV-CRRKEPSVAAMVYPFTGDHKQKFYWGHGEVFI 523 Query: 57 PVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVK 114 V+ ++ +A K+ A+ V + A D+ +E++ +I I I EGIP ++ Sbjct: 524 SVYKSMDDAMKKHPTADVMVNFASLRSAYDSTVEAMNYPQIRTIAIIAEGIPENSTRKLN 583 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 584 KLAASKNVAIIGPATVGGIKPGCLKIGNTGGMMDNILHSKLYRPGSVAYVSRSGGMSNEL 643 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + G V IGGD GT FID L + D + +V++GE+GG E + + Sbjct: 644 NNIIAHHSNGVCEGVAIGGDRYPGTTFIDHLLRYQNDPEVKMLVLLGEVGGVEEYDVCRA 703 Query: 227 LKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAG 279 L D GR KPI+ + G A + GHAGA + + A K A+ EAG Sbjct: 704 LTD----GRITKPIIAWCIGTCASMFSSEVQFGHAGACANAERETALAKNKALAEAG 756 >gi|195383876|ref|XP_002050651.1| GJ20089 [Drosophila virilis] gi|194145448|gb|EDW61844.1| GJ20089 [Drosophila virilis] Length = 1098 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 85/318 (26%), Positives = 144/318 (45%), Gaps = 26/318 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ---VVGGIHP----KKGSTYWTGGNVNV 56 TK +V G+ +A + + C+ VV ++P K YW + + Sbjct: 490 FFSNTTKAIVWGMQQRAVQSMLDFDFI-CRRDEPSVVAMVYPFTGDHKQKYYWGHKEILI 548 Query: 57 PVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVK 114 PV+ +++A + + V + A D+ +E +E +I + I EGIP ++ Sbjct: 549 PVYKKMSDAIHKHKEVDVMVNFASLRSAYDSTLEVLEFPQIRTVAIIAEGIPENMTRKLI 608 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 609 IEANKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNEL 668 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 S+ G + IGGD G+ F+D + + +D T+ IV++GE+GG+ E + Sbjct: 669 NNIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQSDPETKLIVLLGEVGGTEEYDVCAA 728 Query: 227 LKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 +KD GR KP+V + G A + GHAG+ + + A K A+++AG + Sbjct: 729 VKD----GRITKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKALRDAGAYV 784 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 785 PDSFDTLGELIHHVYGEL 802 >gi|47210997|emb|CAF95829.1| unnamed protein product [Tetraodon nigroviridis] Length = 962 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 88/309 (28%), Positives = 141/309 (45%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L K TK +V G+ +A G + Q V ++P K YW + Sbjct: 413 TTLFRKQTKAIVWGMQTRAVQGMLDFDYVCSRDQPSVTAMVYPFTGDHKQKFYWGHKEIL 472 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PV+ +A+A K+ + + + A D+ IE+++ ++I I I EGIP ++ Sbjct: 473 LPVYKNMADAMKKHPEVDVVISFASLRSAFDSTIEAMQYSQIHTIAIIAEGIPEAQTRKL 532 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 533 IKVADDKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 592 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGGS E + Q Sbjct: 593 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVIRYQDTPGIKMIVVLGEIGGSEEYKICQ 652 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KP+V + G A + GHAGA + A K A+++AG Sbjct: 653 GIKE----GRITKPLVCWCIGTCATMFASEVQFGHAGACANQASETAVAKNQALRDAGAY 708 Query: 282 IAPSPARIG 290 + S +G Sbjct: 709 VPKSFDELG 717 >gi|82697335|ref|NP_001032534.1| ATP-citrate synthase [Bos taurus] gi|121957975|sp|Q32PF2|ACLY_BOVIN RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme gi|79158721|gb|AAI08139.1| ATP citrate lyase [Bos taurus] gi|296476337|gb|DAA18452.1| ATP citrate lyase [Bos taurus] Length = 1091 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 86/307 (28%), Positives = 142/307 (46%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 482 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 541 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 542 VFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIK 601 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 602 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 661 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 662 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTAGVKMIVVLGEIGGTEEYKICRGV 721 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 + GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 722 TE----GRITKPVVCWCIGTCAAMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVP 777 Query: 284 PSPARIG 290 S +G Sbjct: 778 RSFDELG 784 >gi|1122286|emb|CAA92426.1| succinyl coenzyme A synthetase [Homo sapiens] Length = 132 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 61/101 (60%), Positives = 73/101 (72%), Gaps = 5/101 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 37 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE 103 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITE Sbjct: 92 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITE 132 >gi|281363477|ref|NP_725514.2| ATP citrate lyase, isoform F [Drosophila melanogaster] gi|272432504|gb|AAM70940.2| ATP citrate lyase, isoform F [Drosophila melanogaster] Length = 1095 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 85/318 (26%), Positives = 144/318 (45%), Gaps = 26/318 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ---VVGGIHP----KKGSTYWTGGNVNV 56 TK +V G+ +A + + C+ VV ++P K YW + + Sbjct: 487 FFSNTTKAIVWGMQQRAVQSMLDFDFI-CRRDEPSVVAMVYPFTGDHKQKYYWGHKEILI 545 Query: 57 PVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVK 114 PV+ +++A + + V + A ++ +E +E +I + I EGIP ++ Sbjct: 546 PVYKKMSDAIHKHKEVDVMVNFASMRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLI 605 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 606 IEADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNEL 665 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + Sbjct: 666 NNIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAA 725 Query: 227 LKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 LKD GR KP+V + G A + GHAG+ + + A K +++AG + Sbjct: 726 LKD----GRITKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKGLRDAGAYV 781 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 782 PDSFDTLGELIHHVYGEL 799 >gi|84490419|ref|NP_001033711.1| ATP-citrate synthase [Ovis aries] gi|121957977|sp|Q2TCH3|ACLY_SHEEP RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme gi|63364938|gb|AAY40742.1| ATP-citrate lyase [Ovis aries] Length = 1101 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 86/307 (28%), Positives = 141/307 (45%), Gaps = 24/307 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++TK +V G+ +A G + + V ++P K YW + +P Sbjct: 492 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 551 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF +A+A K+ + + + A D+ +E++ +I I I EGIP ++ Sbjct: 552 VFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYTQIRTIAIIAEGIPEALTRKLIK 611 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + E+ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 612 KAEQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 671 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + + Sbjct: 672 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGV 731 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 + GR KP+V + G A + GHAGA + A K A+KEAG+ + Sbjct: 732 TE----GRITKPVVCWCIGTCAAMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVP 787 Query: 284 PSPARIG 290 S +G Sbjct: 788 RSFDELG 794 >gi|195334759|ref|XP_002034044.1| GM20101 [Drosophila sechellia] gi|194126014|gb|EDW48057.1| GM20101 [Drosophila sechellia] Length = 1095 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 85/318 (26%), Positives = 144/318 (45%), Gaps = 26/318 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ---VVGGIHP----KKGSTYWTGGNVNV 56 TK +V G+ +A + + C+ VV ++P K YW + + Sbjct: 487 FFSNTTKAIVWGMQQRAVQSMLDFDFI-CRRDEPSVVAMVYPFTGDHKQKYYWGHKEILI 545 Query: 57 PVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVK 114 PV+ +++A + + V + A ++ +E +E +I + I EGIP ++ Sbjct: 546 PVYKKMSDAIHKHKEVDVMVNFASMRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLI 605 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 606 IEADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNEL 665 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + Sbjct: 666 NNIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAA 725 Query: 227 LKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 LKD GR KP+V + G A + GHAG+ + + A K +++AG + Sbjct: 726 LKD----GRVTKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKGLRDAGAYV 781 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 782 PDSFDTLGELIHHVYGEL 799 >gi|195583780|ref|XP_002081694.1| GD25577 [Drosophila simulans] gi|194193703|gb|EDX07279.1| GD25577 [Drosophila simulans] Length = 1095 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 85/318 (26%), Positives = 144/318 (45%), Gaps = 26/318 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ---VVGGIHP----KKGSTYWTGGNVNV 56 TK +V G+ +A + + C+ VV ++P K YW + + Sbjct: 487 FFSNTTKAIVWGMQQRAVQSMLDFDFI-CRRDEPSVVAMVYPFTGDHKQKYYWGHKEILI 545 Query: 57 PVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVK 114 PV+ +++A + + V + A ++ +E +E +I + I EGIP ++ Sbjct: 546 PVYKKMSDAIHKHKEVDVMVNFASMRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLI 605 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 606 IEADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNEL 665 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + Sbjct: 666 NNIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAA 725 Query: 227 LKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 LKD GR KP+V + G A + GHAG+ + + A K +++AG + Sbjct: 726 LKD----GRITKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKGLRDAGAYV 781 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 782 PDSFDTLGELIHHVYGEL 799 >gi|195488393|ref|XP_002092296.1| GE14108 [Drosophila yakuba] gi|194178397|gb|EDW92008.1| GE14108 [Drosophila yakuba] Length = 1096 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 85/318 (26%), Positives = 144/318 (45%), Gaps = 26/318 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ---VVGGIHP----KKGSTYWTGGNVNV 56 TK +V G+ +A + + C+ VV ++P K YW + + Sbjct: 488 FFSNTTKAIVWGMQQRAVQSMLDFDFI-CRRDEPSVVAMVYPFTGDHKQKYYWGHKEILI 546 Query: 57 PVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVK 114 PV+ +++A + + V + A ++ +E +E +I + I EGIP ++ Sbjct: 547 PVYKKMSDAIHKHKEVDVMVNFASMRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLI 606 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 607 IEADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNEL 666 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + Sbjct: 667 NNIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAA 726 Query: 227 LKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 LKD GR KP+V + G A + GHAG+ + + A K +++AG + Sbjct: 727 LKD----GRITKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKGLRDAGAYV 782 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 783 PDSFDTLGELIHHVYGEL 800 >gi|281363473|ref|NP_523755.2| ATP citrate lyase, isoform D [Drosophila melanogaster] gi|281363475|ref|NP_001137674.2| ATP citrate lyase, isoform E [Drosophila melanogaster] gi|28372804|gb|AAD34754.2| LD21334p [Drosophila melanogaster] gi|272432502|gb|AAF58082.2| ATP citrate lyase, isoform D [Drosophila melanogaster] gi|272432503|gb|ACL83128.2| ATP citrate lyase, isoform E [Drosophila melanogaster] Length = 1112 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 85/318 (26%), Positives = 144/318 (45%), Gaps = 26/318 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ---VVGGIHP----KKGSTYWTGGNVNV 56 TK +V G+ +A + + C+ VV ++P K YW + + Sbjct: 504 FFSNTTKAIVWGMQQRAVQSMLDFDFI-CRRDEPSVVAMVYPFTGDHKQKYYWGHKEILI 562 Query: 57 PVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVK 114 PV+ +++A + + V + A ++ +E +E +I + I EGIP ++ Sbjct: 563 PVYKKMSDAIHKHKEVDVMVNFASMRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLI 622 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 623 IEADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNEL 682 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + Sbjct: 683 NNIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAA 742 Query: 227 LKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 LKD GR KP+V + G A + GHAG+ + + A K +++AG + Sbjct: 743 LKD----GRITKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKGLRDAGAYV 798 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 799 PDSFDTLGELIHHVYGEL 816 >gi|242014064|ref|XP_002427718.1| ATP-citrate synthase, putative [Pediculus humanus corporis] gi|212512153|gb|EEB14980.1| ATP-citrate synthase, putative [Pediculus humanus corporis] Length = 1093 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 87/311 (27%), Positives = 140/311 (45%), Gaps = 22/311 (7%) Query: 9 TKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVPVFTTV 62 TK ++ G+ +A + + VV ++P K YW + + V+ + Sbjct: 490 TKAIIWGMQTRAVQSMLDFDFVCRRSEPSVVAMVYPFTGDHKQKFYWGHKEILITVYKKM 549 Query: 63 AEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKARLEKS 120 +A + A+ V + A ++ +E++ +I I I EGIP ++ A Sbjct: 550 EDAMNKHKDADVLVNFASLRSAYESTMETLNYPQIRTIAIIAEGIPENFTRKLIAEANLK 609 Query: 121 SSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 +IGP G + P KIG I+ +++ GSV +SRSG ++ E S+ Sbjct: 610 GVNIIGPATVGGIKPGCFKIGNTGGMMDNILHSRLYQPGSVAYVSRSGGMSNELNNIISK 669 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G V IGGD GT FID + + AD A + IV++GE+GG E E + LK Sbjct: 670 TTDGVYEGVAIGGDRYPGTTFIDHVMRYEADPAIKMIVLLGEVGGVEEYEVCEALK---S 726 Query: 233 RGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 R KP+V + G AP + GHAG+ + K A K + K+AG + S + Sbjct: 727 RKITKPLVAWCIGTCAPMFSSEIQFGHAGSCANSDKETATAKNESFKKAGAEVPSSFDTL 786 Query: 290 GRSLVELLGSL 300 G ++ + SL Sbjct: 787 GDTIHSVYLSL 797 >gi|157105391|ref|XP_001648848.1| ATP-citrate synthase [Aedes aegypti] gi|108880117|gb|EAT44342.1| ATP-citrate synthase [Aedes aegypti] Length = 1127 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 91/318 (28%), Positives = 146/318 (45%), Gaps = 30/318 (9%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ---VVGGIHP----KKGSTYWTGGNVNV 56 + TK LV G+ +A + + C+ + VV ++P K YW V + Sbjct: 519 MFTNRTKALVWGMQTRAVQSMLDFDFI-CRREEPSVVAMVYPFTGYHKQKFYWGHKEVLI 577 Query: 57 PVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVK 114 PV++ ++EA + A+ V + A ++ +E ++ +I I I EGIP ++ Sbjct: 578 PVYSKMSEAINKHKEADVLVNFASLRSAYESSMEVLDYPQIRTIAIIAEGIPENLTRKLN 637 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 + + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 638 MAAREKNVSIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNEL 697 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 S G V IGGD GT F+D + + AD + IV++GE+GG E E + Sbjct: 698 NNIISLTTNGVFEGVAIGGDRYPGTTFMDHILRYQADPDAKMIVLLGEVGGVEEYEVCEA 757 Query: 227 LKDEAKRGR-KKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 L+D GR KP+V + G A GHAG+ + + A K A+ AG + Sbjct: 758 LQD----GRITKPLVAWCIGTCAGMFTSEVQFGHAGSCANSDRETATAKNKALAAAGAHV 813 Query: 283 APSPARIGRSLVELLGSL 300 S +G +L+GS+ Sbjct: 814 PDSFDNLG----DLVGSV 827 >gi|56118260|ref|NP_001008028.1| ATP citrate lyase [Xenopus (Silurana) tropicalis] gi|51703371|gb|AAH80908.1| acly protein [Xenopus (Silurana) tropicalis] Length = 1091 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 87/309 (28%), Positives = 143/309 (46%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L +++TK +V G+ +A G + + V ++P K YW + Sbjct: 480 TTLFNRHTKSIVWGMQTRAVQGMLDFDYICSRSEPSVAALVYPFTGDHKQKFYWGHKEIL 539 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ +I I I EGIP ++ Sbjct: 540 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTIETMNYPQIRSIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKMADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVFEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KPIV + G A + GHAGA + A K A+KEAG+ Sbjct: 720 GIKE----GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 775 Query: 282 IAPSPARIG 290 + S +G Sbjct: 776 VPRSFDELG 784 >gi|328767640|gb|EGF77689.1| hypothetical protein BATDEDRAFT_35901 [Batrachochytrium dendrobatidis JAM81] Length = 1206 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 84/302 (27%), Positives = 140/302 (46%), Gaps = 20/302 (6%) Query: 13 VQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAAN 72 VQG+ EQ + C GG H +K YW +PV+T++AEA R Sbjct: 578 VQGMFDFDFMCKREQPSVACMIYPFGGHHVQK--FYWGTKETLLPVYTSIAEACLRFPDV 635 Query: 73 ASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + VI + ++ E ++ +I I I EG+P ++ ++ +IGP Sbjct: 636 SIVINFASFRSVYESTRELLQYPKIKTIAIIAEGVPERRARQILWEAKEKGVLIIGPATV 695 Query: 131 GILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 G + P KIG I+ ++R GSV +S+SG ++ E S+ G V Sbjct: 696 GGIKPGCFKIGNTGGMMDNIVSSKLYRPGSVAYVSKSGGMSNELNNIISRATDGVYEGVA 755 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVG 241 IGGD G+ FID + + AD + +V++GE+GG E A+ K G KKP+V Sbjct: 756 IGGDRYPGSTFIDHMLRYEADSNAKILVLLGEVGGVEEYAIAE----AVKAGHIKKPVVA 811 Query: 242 FVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + G A T GHAG+ + A+ K A+ ++G+ + P+ + ++L ++ Sbjct: 812 WCIGTCAKMFTTDVQFGHAGSFANSNMETADAKNKALADSGVIVPPTFEDLPQTLAQVYK 871 Query: 299 SL 300 ++ Sbjct: 872 NM 873 >gi|170029202|ref|XP_001842482.1| ATP-citrate synthase [Culex quinquefasciatus] gi|167881585|gb|EDS44968.1| ATP-citrate synthase [Culex quinquefasciatus] Length = 1096 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 92/320 (28%), Positives = 147/320 (45%), Gaps = 30/320 (9%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ---VVGGIHP----KKGSTYWTGGNVNV 56 + K TK LV G+ +A + + C+ VV ++P K YW V + Sbjct: 488 MFSKGTKALVWGMQTRAVQSMLDFDFI-CRRDEPSVVAMVYPFTGYHKQKFYWGHKEVLI 546 Query: 57 PVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIP--VLDMVR 112 PV++ +++A + A+ V + A D+ +E ++ +I I I EGIP + + Sbjct: 547 PVYSKMSDAINKHKEADVLVNFASLRSAYDSSVEVLDYPQIRTIAIIAEGIPENLTRKLN 606 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTY 164 V AR + S +IGP G + P KIG I+ ++R GSV +SRSG ++ Sbjct: 607 VAARSKNVS--IIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSN 664 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E S G V IGGD GT F+D + + AD + +V++GE+GG E E Sbjct: 665 ELNNIISLTTDGVFEGVAIGGDRYPGTTFMDHILRYQADPDAKMLVLLGEVGGVEEYEVC 724 Query: 225 QFLKDEAKRGR-KKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 + L+D GR KP++ + G A GHAG+ + + A K ++ AG Sbjct: 725 EALQD----GRITKPLIAWCIGTCAGMFTSEVQFGHAGSCANSDRETATAKNKSLAAAGA 780 Query: 281 CIAPSPARIGRSLVELLGSL 300 + S +G + + G L Sbjct: 781 HVPDSFDTLGDLIGSVYGDL 800 >gi|114054981|gb|ABI50076.1| ATP citrate lyase alpha subunit [Balnearium lithotrophicum] Length = 541 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 86/302 (28%), Positives = 137/302 (45%), Gaps = 23/302 (7%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQT----QVVGGIHPKKGSTYWTGGN-VNVP 57 IL D+NTK + L A + L ++ +V +K ++ G + +P Sbjct: 7 ILFDRNTKAIFWNLNRNAIQRMLDYDYLVGRSPSIVAIVAPTQSRKFEKFFYGTEEIMIP 66 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCIT-EGIPVLDMVRVKA 115 ++ + EA +E A+ V + A D IE+I + IT EGIP + A Sbjct: 67 IYRSTTEAAEEHPDADVLVNFASFRTAYDVTIEAINLPTIRTIAITAEGIPERLARDMAA 126 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 R + S +IGP G + + +IG I+ + R GS G+++RSG L E Sbjct: 127 RAKASGKWIIGPATVGGIAAGAFRIGNAGGTLENIVKSKLHRPGSCGLVTRSGGLFNELS 186 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G + IGGD G++F+D L F + A + ++M+GE+GG E A+ + Sbjct: 187 NIIARNADGIVEGIAIGGDRFPGSDFLDHLMRFQKNPAVKYMIMLGEVGGELEYRVAEAI 246 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPP---GRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 KRG KP++ + G A GHAGA + A+ K A+KEAG + Sbjct: 247 ----KRGDITKPVIAWCIGTIAKHFGGEVQFGHAGAKAGADRETADAKNRALKEAGAIVP 302 Query: 284 PS 285 S Sbjct: 303 ES 304 >gi|196002753|ref|XP_002111244.1| hypothetical protein TRIADDRAFT_22398 [Trichoplax adhaerens] gi|190587195|gb|EDV27248.1| hypothetical protein TRIADDRAFT_22398 [Trichoplax adhaerens] Length = 1088 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 85/299 (28%), Positives = 135/299 (45%), Gaps = 25/299 (8%) Query: 1 MSILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNV 54 +++ DK T+ V G+ +A G + V I+P K YW + Sbjct: 476 ITVFTDK-TRCFVWGMQPRAVQGMLDFDYVSSRETWSVAAMIYPFSGDHKQKFYWGHKEI 534 Query: 55 NVPVFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVR 112 +PVF +++A + + V + A D+ +E+++ +I I I EGIP + Sbjct: 535 LIPVFKDMSDAMRKFPEVDVLVNFASLRSAYDSTMEALQFKQIKAISIIAEGIPEAKTKQ 594 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTY 164 + A ++ +IGP G + P +IG I+ ++R GSV +SRSG ++ Sbjct: 595 LIATAQEKDVTVIGPATVGGIKPGCFRIGNTGGMLDNIIASKLYRPGSVAYVSRSGGMSN 654 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E + G V IGGD GT FID + + + + IVM+GE+GG E Sbjct: 655 ELNNMICRTTDGVYEGVAIGGDRYPGTTFIDHILRYNDTDDVKLIVMLGEVGGIEEYHIC 714 Query: 225 QFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAG 279 Q E K GR KP+V + G A + GHAGA + + + K A++EAG Sbjct: 715 Q----EIKNGRITKPVVAWCIGTCASMFTSEVQFGHAGACANADRETSVAKNKALREAG 769 >gi|195029649|ref|XP_001987684.1| GH19829 [Drosophila grimshawi] gi|193903684|gb|EDW02551.1| GH19829 [Drosophila grimshawi] Length = 1100 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 84/318 (26%), Positives = 144/318 (45%), Gaps = 26/318 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ---VVGGIHP----KKGSTYWTGGNVNV 56 TK +V G+ +A + + C+ VV ++P K YW + + Sbjct: 492 FFSNTTKAIVWGMQQRAVQSMLDFDFI-CRRDEPSVVAMVYPFTGDHKQKYYWGHKEILI 550 Query: 57 PVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVK 114 PV+ +++A + + V + A D+ +E +E +I + I EGIP ++ Sbjct: 551 PVYKKMSDAIHKHKEVDVMVNFASLRSAFDSTLEVLEFPQIRTVAIIAEGIPENMTRKLI 610 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 611 IEADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNEL 670 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + Sbjct: 671 NNIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAA 730 Query: 227 LKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 +KD GR KP+V + G A + GHAG+ + + A K A++++G + Sbjct: 731 VKD----GRITKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKALRDSGAYV 786 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 787 PDSFDTLGELIHHVYSEL 804 >gi|148222492|ref|NP_001088452.1| hypothetical protein LOC495316 [Xenopus laevis] gi|54311201|gb|AAH84776.1| LOC495316 protein [Xenopus laevis] Length = 1101 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 88/309 (28%), Positives = 141/309 (45%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 490 TTLFTRHTKSIVWGMQTRAVQGMLDFDYICSRSEPSVAALVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A K+ + + + A D+ IE++ +I I I EGIP ++ Sbjct: 550 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNFPQIRAIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKMADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD + F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVFEGVAIGGDRYPASTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KPIV + G A + GHAGA + A K AMKEAG+ Sbjct: 730 GIKE----GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQAMKEAGVF 785 Query: 282 IAPSPARIG 290 + S +G Sbjct: 786 VPRSFDELG 794 >gi|189238364|ref|XP_001808341.1| PREDICTED: similar to ATP-citrate synthase [Tribolium castaneum] Length = 1092 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 20/282 (7%) Query: 36 VVGGIHP----KKGSTYWTGGNVNVPVFTTVAEAKERT-AANASVIYVPPSGAGDAIIES 90 VV I+P K YW + +PV+ + +A + A+ V + A + +E+ Sbjct: 517 VVAIIYPFTGDHKQKFYWGHKEILIPVYKKMNDAMTKHPEADVLVNFASLRSAYQSTVET 576 Query: 91 IE-AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG-------- 141 +E +I I I EGIP ++ + +IGP G + P KIG Sbjct: 577 MEFPQIRTIAIIAEGIPENQTRKLIKLANEKKVAIIGPATVGGVKPGCFKIGNTGGMMDN 636 Query: 142 IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFL 201 I+ ++R GSV +SRSG ++ E S+ G V IGGD GT F+D + + Sbjct: 637 ILHSKLYRSGSVAYVSRSGGMSNELNNIVSKATDGVYEGVAIGGDRYPGTTFMDHIMRYQ 696 Query: 202 ADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA---PPGRTMGHAG 258 DE + I+++GE+GG E E LK++ KP+V + G A GHAG Sbjct: 697 GDENVKMIILLGEVGGVEEYEVCNALKNKII---TKPLVAWCIGTCAGMFTSEVQFGHAG 753 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 + + + A K A+K AG + S +G + E+ L Sbjct: 754 SCANSNQETATAKNEALKAAGAHVPASFDYLGEVIQEVYEKL 795 >gi|194882681|ref|XP_001975439.1| GG22311 [Drosophila erecta] gi|190658626|gb|EDV55839.1| GG22311 [Drosophila erecta] Length = 1095 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 84/318 (26%), Positives = 144/318 (45%), Gaps = 26/318 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ---VVGGIHP----KKGSTYWTGGNVNV 56 TK +V G+ +A + + C+ VV ++P K YW + + Sbjct: 487 FFSNTTKAIVWGMQQRAVQSMLDFDFI-CRRDEPSVVAMVYPFTGDHKQKYYWGHKEILI 545 Query: 57 PVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVK 114 PV+ +++A + + V + A ++ +E ++ +I + I EGIP ++ Sbjct: 546 PVYKKMSDAIHKHKEVDVMVNFASMRSAYESTLEVLDFPQIRTVAIIAEGIPENMTRKLI 605 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 606 IEADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNEL 665 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + Sbjct: 666 NNIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAA 725 Query: 227 LKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 LKD GR KP+V + G A + GHAG+ + + A K +++AG + Sbjct: 726 LKD----GRITKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKGLRDAGAYV 781 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 782 PDSFDTLGELIHHVYGEL 799 >gi|270008566|gb|EFA05014.1| hypothetical protein TcasGA2_TC015096 [Tribolium castaneum] Length = 1089 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 20/282 (7%) Query: 36 VVGGIHP----KKGSTYWTGGNVNVPVFTTVAEAKERT-AANASVIYVPPSGAGDAIIES 90 VV I+P K YW + +PV+ + +A + A+ V + A + +E+ Sbjct: 514 VVAIIYPFTGDHKQKFYWGHKEILIPVYKKMNDAMTKHPEADVLVNFASLRSAYQSTVET 573 Query: 91 IE-AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG-------- 141 +E +I I I EGIP ++ + +IGP G + P KIG Sbjct: 574 MEFPQIRTIAIIAEGIPENQTRKLIKLANEKKVAIIGPATVGGVKPGCFKIGNTGGMMDN 633 Query: 142 IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFL 201 I+ ++R GSV +SRSG ++ E S+ G V IGGD GT F+D + + Sbjct: 634 ILHSKLYRSGSVAYVSRSGGMSNELNNIVSKATDGVYEGVAIGGDRYPGTTFMDHIMRYQ 693 Query: 202 ADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA---PPGRTMGHAG 258 DE + I+++GE+GG E E LK++ KP+V + G A GHAG Sbjct: 694 GDENVKMIILLGEVGGVEEYEVCNALKNKII---TKPLVAWCIGTCAGMFTSEVQFGHAG 750 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 + + + A K A+K AG + S +G + E+ L Sbjct: 751 SCANSNQETATAKNEALKAAGAHVPASFDYLGEVIQEVYEKL 792 >gi|299739746|ref|XP_001839751.2| ATP citrate lyase isoform 2 [Coprinopsis cinerea okayama7#130] gi|298403919|gb|EAU82052.2| ATP citrate lyase isoform 2 [Coprinopsis cinerea okayama7#130] Length = 1160 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 88/315 (27%), Positives = 141/315 (44%), Gaps = 24/315 (7%) Query: 6 DKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVNVPVF 59 D NT+ V GL +A G + + V I+P G YW +PV+ Sbjct: 546 DANTRSFVYGLQPRAIQGMLDFDYSCGRQAPSVAAMIYPFGGHHIQKFYWGTKETLLPVY 605 Query: 60 TTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARL 117 T++ EA + + V + + +ES+E +I I I EG+P + + Sbjct: 606 TSLKEAVAKHPDVDVLVNFASSRSVYPSTLESLEFPQIKAIALIAEGVPERHAREILWKA 665 Query: 118 EKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 ++ +IGP G + P +IG I+ ++R GSVG +S+SG ++ E Sbjct: 666 KEKGVLIIGPATVGGIKPGCFRIGNSGGMMDNIIASKLYRPGSVGYVSKSGGMSNELNNI 725 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 S G + IGGD G+ FID L + AD + +V++GE+GG E + +K Sbjct: 726 LSLVTDGTYEGIAIGGDRYPGSTFIDHLLRYEADPNCKMLVLLGEVGGIEEYRVIEAVKS 785 Query: 230 EAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 G+ KKPIV + G A T GHAG++ + A+ K AM++AG + + Sbjct: 786 ----GKIKKPIVAWAIGTCAKMFTTEVQFGHAGSMANSDMETADAKNKAMRDAGFVVPET 841 Query: 286 PARIGRSLVELLGSL 300 + L E +L Sbjct: 842 FEELPHVLKETYENL 856 >gi|39977669|ref|XP_370222.1| ATP-citrate synthase subunit 1 [Magnaporthe oryzae 70-15] gi|145013764|gb|EDJ98405.1| ATP-citrate synthase subunit 1 [Magnaporthe oryzae 70-15] Length = 665 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 93/316 (29%), Positives = 138/316 (43%), Gaps = 26/316 (8%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGS----TYWTGGNVNVP 57 L + T+ V GL +A G + V G I+ G YW +P Sbjct: 44 LFNDKTRCFVYGLQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 103 Query: 58 VFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + +V+ + + +E +E I I I EG+P + Sbjct: 104 VYQEVQKAVAKHPDVDTVVNFASSRSVYSSTLELMEYPNIKTIAIIAEGVPERRAREIAH 163 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P S KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 164 IAKKKGITIIGPATVGGIKPGSFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 223 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + AD + ++++GE+GG E + + + Sbjct: 224 NIISQNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPDCKILLLLGEVGGVEEYKVIEAV 283 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KPIV + G A +T GHAG+ + A K +MKEAG + Sbjct: 284 KEGVI---TKPIVAWAIGTCASMFKTEVQFGHAGSFANSQLETAATKNKSMKEAGFYVPN 340 Query: 285 SPARIGRSLVELLGSL 300 + L ELL SL Sbjct: 341 T----FEELPELLSSL 352 >gi|125811843|ref|XP_001362021.1| GA20986 [Drosophila pseudoobscura pseudoobscura] gi|54637198|gb|EAL26601.1| GA20986 [Drosophila pseudoobscura pseudoobscura] Length = 1087 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 83/315 (26%), Positives = 142/315 (45%), Gaps = 30/315 (9%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVPVF 59 TK +V G+ ++A+ + VV ++P K YW + +PV+ Sbjct: 489 FFSNTTKAIVWGMQ--------QRAVQREEPSVVAMVYPFTGDHKQKYYWGHKEILIPVY 540 Query: 60 TTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARL 117 +++A + + V + A ++ +E +E +I + I EGIP ++ Sbjct: 541 KKMSDAIHKNKEVDVLVSFASLRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLILEA 600 Query: 118 EKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 601 DKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELNNI 660 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + L+D Sbjct: 661 ISKATDGVIEGIAIGGDRYPGSTFMDHIMRYQADPETKLIVLLGEVGGTEEYDVCAALQD 720 Query: 230 EAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 GR KP+V + G A + GHAG+ + + A K A++EA + S Sbjct: 721 ----GRITKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKALREARAYVPDS 776 Query: 286 PARIGRSLVELLGSL 300 +G + + L Sbjct: 777 FDTLGELIHHVYSEL 791 >gi|195171228|ref|XP_002026409.1| GL20648 [Drosophila persimilis] gi|194111311|gb|EDW33354.1| GL20648 [Drosophila persimilis] Length = 1069 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 83/315 (26%), Positives = 142/315 (45%), Gaps = 30/315 (9%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVPVF 59 TK +V G+ ++A+ + VV ++P K YW + +PV+ Sbjct: 489 FFSNTTKAIVWGMQ--------QRAVQREEPSVVAMVYPFTGDHKQKYYWGHKEILIPVY 540 Query: 60 TTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARL 117 +++A + + V + A ++ +E +E +I + I EGIP ++ Sbjct: 541 KKMSDAIHKNKEVDVLVSFASLRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLILEA 600 Query: 118 EKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 601 DKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELNNI 660 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + L+D Sbjct: 661 ISKATDGVIEGIAIGGDRYPGSTFMDHIMRYQADPETKLIVLLGEVGGTEEYDVCAALQD 720 Query: 230 EAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 GR KP+V + G A + GHAG+ + + A K A++EA + S Sbjct: 721 ----GRITKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKALREARAYVPDS 776 Query: 286 PARIGRSLVELLGSL 300 +G + + L Sbjct: 777 FDTLGELIHHVYSEL 791 >gi|18204829|gb|AAH21502.1| Acly protein [Mus musculus] Length = 592 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 80/266 (30%), Positives = 128/266 (48%), Gaps = 20/266 (7%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIP 96 G H +K YW + +PVF +A+A K+ + + + A D+ +E++ A+I Sbjct: 26 GDHKQK--FYWGHKEILIPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIR 83 Query: 97 LIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIF 148 I I EGIP ++ + ++ +IGP G + P KIG I+ ++ Sbjct: 84 TIAIIAEGIPEALTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLY 143 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 R GSV +SRSG ++ E S+ G V IGGD G+ F+D + + + Sbjct: 144 RPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKM 203 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGG 264 IV++GEIGG+ E + + +K+ GR KP+V + G A + GHAGA + Sbjct: 204 IVVLGEIGGTEEYKICRGIKE----GRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQA 259 Query: 265 KGGAEDKINAMKEAGICIAPSPARIG 290 A K A+KEAG+ + S +G Sbjct: 260 SETAVAKNQALKEAGVFVPRSFDELG 285 >gi|28935|emb|CAA45614.1| ATP-citrate (pro-S-)-lyase [Homo sapiens] Length = 1105 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 84/309 (27%), Positives = 144/309 (46%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 494 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 553 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 554 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 613 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++ + +V +SRSG ++ E Sbjct: 614 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYPQAAVAYVSRSGGMSNE 673 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + ++ Sbjct: 674 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKISR 733 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KPIV + G A + GHAGA + A K A+KEAG+ Sbjct: 734 GIKE----GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 789 Query: 282 IAPSPARIG 290 + S +G Sbjct: 790 VPRSFDELG 798 >gi|30912679|sp|O93988|ACL1_SORMK RecName: Full=ATP-citrate synthase subunit 1; AltName: Full=ATP-citrate (pro-S-)-lyase 1; AltName: Full=Citrate cleavage enzyme subunit 1 gi|4107343|emb|CAA12224.1| ATP citrate lyase [Sordaria macrospora] gi|7160185|emb|CAB76165.1| ATP citrate lyase, subunit 1 [Sordaria macrospora] gi|289614489|emb|CBI58773.1| ATP citrate lyase subunit 1 [Sordaria macrospora] Length = 674 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 88/298 (29%), Positives = 131/298 (43%), Gaps = 22/298 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGS----TYWTGGNVNVP 57 L ++ T+ V GL +A G + V G I+ G YW +P Sbjct: 52 LFNEKTRCFVYGLQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 111 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E +E +I I I EG+P + Sbjct: 112 VYQEVQKAIAKHPDVDVVVNFASSRSVYSSTMELMEHPQIKTIAIIAEGVPERRAREIAY 171 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 172 VAKKKGITIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 231 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + AD A + +V++GE+GG E + + + Sbjct: 232 NIISQTTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPACKILVLLGEVGGVEEYKVIEAV 291 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 K KPIV + G A +T GHAGA + A K +M+EAG + Sbjct: 292 KQGII---TKPIVAWAIGTCASMFKTEVQFGHAGAFANSQLETAATKNKSMREAGFYV 346 >gi|312183633|gb|ADQ42386.1| ATP-citrate lyase subunit A [Methanosaeta harundinacea] Length = 614 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 91/302 (30%), Positives = 135/302 (44%), Gaps = 25/302 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQV---VGGIHPKKG---STYWTGGNVNVP 57 L D+NT+ V GL A + L C+ +V I+P +G +W + +P Sbjct: 8 LFDRNTRAFVYGLQTNAIQRMLDFDYL-CRREVPSVAAIINPNRGGVQKVFWGTEEILLP 66 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRV-K 114 ++ T+ EA A V + A D +E++ + I + I EG+P M RV Sbjct: 67 MYKTIPEAAAAHPFAEVMVNFASFRSAFDTTMEALASPTIKTVAIIAEGVPE-RMARVMA 125 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI--------FRKGSVGILSRSGTLTYEA 166 A K +IGP G L + +IG G+I R GSVG +S+SG + EA Sbjct: 126 ATARKMKKTIIGPATVGGLAAGAFRIGNTAGTIENIIESKLHRPGSVGFVSKSGGMLNEA 185 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 ++ G + IGGD G+ +D + F A+ I +GE+GG+ E + Sbjct: 186 FNIIARNSSGVVEGIAIGGDRYPGSNLMDHILRFEANPEVAIIACLGEVGGTDEYRIVEA 245 Query: 227 LKDEAKRGRKKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 LK + KKP+V +V G K P GHAGA A+ K A+KEAG + Sbjct: 246 LKADQI---KKPLVIWVTGTCSKILPGSVQFGHAGAKAQTDLETADAKNRALKEAGAIVP 302 Query: 284 PS 285 S Sbjct: 303 AS 304 >gi|51092031|gb|AAT94429.1| RE70805p [Drosophila melanogaster] Length = 1112 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 26/318 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ---VVGGIHP----KKGSTYWTGGNVNV 56 TK +V G+ +A + + C+ VV ++P K YW + + Sbjct: 504 FFSNTTKAIVWGMQQRAVQSMLDFDFI-CRRDEPSVVAMVYPFTGDHKQKYYWGHKEILI 562 Query: 57 PVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVK 114 PV+ +++A + + V + A ++ +E +E +I + I EGIP ++ Sbjct: 563 PVYKKMSDAIHKHKEVDVMVNFASMRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLI 622 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 623 IEADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNEL 682 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + Sbjct: 683 NNIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAA 742 Query: 227 LKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 LKD GR KP+V + G A + GHAG+ + + A K +++AG + Sbjct: 743 LKD----GRITKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKGLRDAGAYV 798 Query: 283 APSPARIGRSLVELLGSL 300 S + + + G L Sbjct: 799 PDSFDTLSELIHHVYGEL 816 >gi|327275431|ref|XP_003222477.1| PREDICTED: LOW QUALITY PROTEIN: ATP-citrate synthase-like [Anolis carolinensis] Length = 1101 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 147/321 (45%), Gaps = 27/321 (8%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 490 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRV 113 +PVF +A+A K+ + + + A D+ +E++ +I + I EGIP R+ Sbjct: 550 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYPQIRTVAIIAEGIPEPLTRRL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKMADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVFEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KP+V + G A + GHAGA + A K A+KE G+ Sbjct: 730 GVKE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEVGVF 785 Query: 282 IAPSPARIG---RSLVELLGS 299 + S +G +S+ E L S Sbjct: 786 VPRSFDELGDVIQSVYEALVS 806 >gi|298508700|pdb|3MWD|B Chain B, Truncated Human Atp-Citrate Lyase With Citrate Bound Length = 334 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 88/319 (27%), Positives = 141/319 (44%), Gaps = 24/319 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G +A G + + V ++P K YW + Sbjct: 4 TTLFSRHTKAIVWGXQTRAVQGXLDFDYVCSRDEPSVAAXVYPFTGDHKQKFYWGHKEIL 63 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF A+A ++ + + + A D+ E+ A+I I I EGIP ++ Sbjct: 64 IPVFKNXADAXRKHPEVDVLINFASLRSAYDSTXETXNYAQIRTIAIIAEGIPEALTRKL 123 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG + E Sbjct: 124 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGXLDNILASKLYRPGSVAYVSRSGGXSNE 183 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F D + + + IV++GEIGG+ E + + Sbjct: 184 LNNIISRTTDGVYEGVAIGGDRYPGSTFXDHVLRYQDTPGVKXIVVLGEIGGTEEYKICR 243 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KPIV + G A + GHAGA + A K A+KEAG+ Sbjct: 244 GIKE----GRLTKPIVCWCIGTCATXFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 299 Query: 282 IAPSPARIGRSLVELLGSL 300 + S +G + + L Sbjct: 300 VPRSFDELGEIIQSVYEDL 318 >gi|310795720|gb|EFQ31181.1| CoA-ligase [Glomerella graminicola M1.001] Length = 662 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 89/316 (28%), Positives = 138/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGS----TYWTGGNVNVP 57 L + T+ V GL +A G + V G I+ G YW +P Sbjct: 41 LFNDKTRCFVYGLQPRAVQGMLDFDFICKRKTPSVAGIIYTFGGQFVSKMYWGTSETLLP 100 Query: 58 VFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 V+ V++A + + V + + +E +E +I I I EG+P + Sbjct: 101 VYQEVSKAMAKHPDVDVVVNFASSRSVYSSTMELMECPQIKTIAIIAEGVPERRAREIAH 160 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 161 KAQQKGITIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 220 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + G V IGGD GT FID L + AD + +V++GE+GG E + + + Sbjct: 221 NIIANNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPDCKILVLLGEVGGVEEYKVIKAV 280 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 +D KPIV + G A +T GHAGA + A+ K MKEAG + Sbjct: 281 EDGVI---TKPIVAWAIGTCASMFKTEVQFGHAGAFANSTLETAKTKNEKMKEAGFYVPE 337 Query: 285 SPARIGRSLVELLGSL 300 + + + L L SL Sbjct: 338 TFEDMPQVLKALYDSL 353 >gi|145243014|ref|XP_001394055.1| ATP-citrate synthase subunit 1 [Aspergillus niger CBS 513.88] gi|134078722|emb|CAK48284.1| unnamed protein product [Aspergillus niger] Length = 656 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 78/262 (29%), Positives = 125/262 (47%), Gaps = 16/262 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ V++A + +V+ + + +E +E +I I I EG+ Sbjct: 87 YWGTSETLLPVYQDVSKAMAKHPDVDTVVNFASSRSVYSSTMELMECPQIRSIAIIAEGV 146 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 147 PERRAREIMVKAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 206 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E SQ G V IGGD GT FID L + A+ + +V++GE+GG Sbjct: 207 KSGGMSNELNNIISQTTDGVYEGVAIGGDRYPGTTFIDHLLRYQAEPECKILVLLGEVGG 266 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K+ KPIV + G A +T GHAGA + A K A Sbjct: 267 VEEYRVIEAVKNGTI---TKPIVAWAIGTCASMFKTEVQFGHAGASANSDLETAVAKNKA 323 Query: 275 MKEAGICIAPSPARIGRSLVEL 296 M+EAGI + + + ++L E+ Sbjct: 324 MREAGIFVPETFEDLPQTLKEV 345 >gi|326934168|ref|XP_003213166.1| PREDICTED: ATP-citrate synthase-like isoform 2 [Meleagris gallopavo] Length = 1101 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 84/319 (26%), Positives = 145/319 (45%), Gaps = 24/319 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVN 55 + L ++TK ++ G+ +A G + + V ++P G YW + Sbjct: 490 TTLFSRHTKAIIWGMQTRAVQGMLDFDYICSRDEPSVAAMVYPFTGDHRQKFYWGHKEIL 549 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRV 113 +PV+ +++A ++ + + + A D+ +E++ +I I I EGIP ++ Sbjct: 550 IPVYKNMSDAMRKHPEVDVLINFASLRSAYDSTVETMNYPQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKAADKKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSAFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KP+V + G A + GHAGA + A K A+KEAG+ Sbjct: 730 GIKE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 785 Query: 282 IAPSPARIGRSLVELLGSL 300 + S +G + + L Sbjct: 786 VPRSFDELGEVIQSVYQDL 804 >gi|119175812|ref|XP_001240069.1| ATP-citrate synthase subunit 1 [Coccidioides immitis RS] gi|303318315|ref|XP_003069157.1| ATP-citrate synthase subunit 1, putative [Coccidioides posadasii C735 delta SOWgp] gi|240108843|gb|EER27012.1| ATP-citrate synthase subunit 1, putative [Coccidioides posadasii C735 delta SOWgp] gi|320039167|gb|EFW21102.1| ATP-citrate synthase [Coccidioides posadasii str. Silveira] Length = 657 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 117/248 (47%), Gaps = 16/248 (6%) Query: 48 YWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ +V +A + T + V + + +E ++ +I I I EG+ Sbjct: 88 YWGTSETLLPVYQSVGKAMAKHTDVDVVVNFASSRSVYSSTMELMQYPQIKTIAIIAEGV 147 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 148 PERRAREIMVTAKEKGVTIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 207 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E SQ G + IGGD GT F+D L F AD + ++++GE+GG Sbjct: 208 KSGGMSNELNNIVSQTTDGVYEGIAIGGDRYPGTTFLDHLLRFQADPQCKILLLLGEVGG 267 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K+ KP+V + G A +T GHAGA + A K A Sbjct: 268 VEEYRVIEAVKNGTI---TKPVVAWAIGTCASMFKTEVQFGHAGASANSQLETAVMKNQA 324 Query: 275 MKEAGICI 282 M+EAGI + Sbjct: 325 MREAGIHV 332 >gi|326934166|ref|XP_003213165.1| PREDICTED: ATP-citrate synthase-like isoform 1 [Meleagris gallopavo] Length = 1091 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 84/319 (26%), Positives = 145/319 (45%), Gaps = 24/319 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVN 55 + L ++TK ++ G+ +A G + + V ++P G YW + Sbjct: 480 TTLFSRHTKAIIWGMQTRAVQGMLDFDYICSRDEPSVAAMVYPFTGDHRQKFYWGHKEIL 539 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRV 113 +PV+ +++A ++ + + + A D+ +E++ +I I I EGIP ++ Sbjct: 540 IPVYKNMSDAMRKHPEVDVLINFASLRSAYDSTVETMNYPQIRTIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKAADKKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVYEGVAIGGDRYPGSAFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KP+V + G A + GHAGA + A K A+KEAG+ Sbjct: 720 GIKE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 775 Query: 282 IAPSPARIGRSLVELLGSL 300 + S +G + + L Sbjct: 776 VPRSFDELGEVIQSVYQDL 794 >gi|116205085|ref|XP_001228353.1| ATP-citrate synthase subunit 1 [Chaetomium globosum CBS 148.51] gi|88176554|gb|EAQ84022.1| ATP-citrate synthase subunit 1 [Chaetomium globosum CBS 148.51] Length = 663 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 86/298 (28%), Positives = 131/298 (43%), Gaps = 22/298 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGS----TYWTGGNVNVP 57 L + T+ V GL +A G + V G I+ G YW +P Sbjct: 41 LFNDKTRCFVYGLQPRAVQGMLDFDFICKRATPSVAGIIYTFGGQFVSKMYWGTSETLLP 100 Query: 58 VFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + +V+ + + +E +E +I I I EG+P + Sbjct: 101 VYQQVEKAMAKHPDVDTVVNFASSRSVYSSTLELMENPQIKTIAIIAEGVPERRAREIAH 160 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P S KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 161 VAQKKGVTIIGPATVGGIKPGSFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 220 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + AD + +V++GE+GG E + + + Sbjct: 221 NIISQNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPDCKILVLLGEVGGVEEYKVIEAV 280 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 K KPIV + G A +T GHAG+ + A K +M++AG + Sbjct: 281 KQGVI---TKPIVAWAIGTCASMFKTEVQFGHAGSFANSQLETAAMKNQSMRDAGFHV 335 >gi|289724570|gb|ADD18276.1| ATP-citrate lyase [Glossina morsitans morsitans] Length = 708 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 85/313 (27%), Positives = 141/313 (45%), Gaps = 26/313 (8%) Query: 9 TKVLVQGLTGKAGTFHTEQAILYCQTQ---VVGGIHP----KKGSTYWTGGNVNVPVFTT 61 TK +V G+ +A + + C+ VV ++P K YW + +PV+ Sbjct: 105 TKAIVWGMQQRAVQSMLDFDFI-CRRDEPSVVAMVYPFTGDHKQKFYWGHKEILIPVYKN 163 Query: 62 VAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARLEK 119 +++A R + V + A ++ +E ++ +I + I EGIP ++ K Sbjct: 164 MSDAVTRHKEVDVMVNFASLRSAYESTMEVLDFPQIRTVAIIAEGIPENMTRKMILAANK 223 Query: 120 SSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 +IGP G + P KIG I+ ++R GSV +SRSG ++ E S Sbjct: 224 KGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELNNIVS 283 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + G + IGGD GT F+D + + AD + IV++GE+GG+ E + LKD Sbjct: 284 KATDGVLEGIAIGGDRYPGTTFMDHIMRYQADPEAKLIVLLGEVGGTEEYDVCAALKD-- 341 Query: 232 KRGR-KKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 GR KP+V + G A GHAG+ + + A K A+++AG + S Sbjct: 342 --GRITKPLVAWCIGTCAGMFTSEVQFGHAGSCANSDRETATAKNKALRDAGAYVPDSFD 399 Query: 288 RIGRSLVELLGSL 300 +G + + L Sbjct: 400 TLGELIQHVYAEL 412 >gi|302566700|gb|ADL41159.1| ATP-citrate lyase [Anser anser anser] Length = 1091 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 84/319 (26%), Positives = 145/319 (45%), Gaps = 24/319 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVN 55 + L ++TK ++ G+ +A G + + V ++P G YW + Sbjct: 480 TTLFSRHTKAIIWGMQTRAVQGMLDFDYICSRDEPSVAAMVYPFTGDHRQKFYWGHKEIL 539 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRV 113 +PV+ +++A ++ + + + A D+ +E++ +I I I EGIP ++ Sbjct: 540 IPVYKNMSDAMRKHPEVDVLINFASLRSAYDSTVETMNYPQIRTIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKAADKKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KP+V + G A + GHAGA + A K A+KEAG+ Sbjct: 720 GVKE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 775 Query: 282 IAPSPARIGRSLVELLGSL 300 + S +G + + L Sbjct: 776 VPRSFDELGEVIQSVYQDL 794 >gi|121699808|ref|XP_001268169.1| ATP citrate lyase, subunit 1, putative [Aspergillus clavatus NRRL 1] gi|119396311|gb|EAW06743.1| ATP citrate lyase, subunit 1, putative [Aspergillus clavatus NRRL 1] Length = 657 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 117/248 (47%), Gaps = 16/248 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ VA+A + +V+ + + +E ++ +I I I EG+ Sbjct: 88 YWGTSETLLPVYQDVAKAMAKHPDVDTVVNFASSRSVYSSTMELMQCPQIKSIAIIAEGV 147 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + + +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 148 PERRAREIMVTAREKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 207 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E +Q G + IGGD GT FID L + AD + ++++GE+GG Sbjct: 208 KSGGMSNELNNIIAQNTDGVHEGIAIGGDRYPGTTFIDHLLRYQADPECKILLLLGEVGG 267 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K+ KPIV + G A +T GHAGA + A +K A Sbjct: 268 VEEYRVIEAVKNGTI---TKPIVAWAIGTCASMFKTEVQFGHAGASANSQLETAVNKNKA 324 Query: 275 MKEAGICI 282 M+EAGI + Sbjct: 325 MREAGIYV 332 >gi|19112994|ref|NP_596202.1| ATP citrate synthase subunit 1 (predicted) [Schizosaccharomyces pombe 972h-] gi|30912748|sp|Q9P7W3|ACL1_SCHPO RecName: Full=Probable ATP-citrate synthase subunit 1; AltName: Full=ATP-citrate (pro-S-)-lyase 1; AltName: Full=Citrate cleavage enzyme subunit 1 gi|6723921|emb|CAB66451.1| ATP citrate synthase subunit 1 (predicted) [Schizosaccharomyces pombe] Length = 615 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 90/301 (29%), Positives = 135/301 (44%), Gaps = 28/301 (9%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQV--VGGIHPKKGST-----YWTGGNV 54 L K+T+ V G+ KA G + C V V I GS YW + Sbjct: 12 LFSKDTRAFVYGMQTKAVQGMLDFDYM---CGRTVPSVAAIIYTFGSQSISKLYWGTKEI 68 Query: 55 NVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVR 112 +PV+ T+ EA + + V + A + +E +E +I I I EG+P Sbjct: 69 LLPVYRTIEEACTKHPEVDVVVNFASSRSAYASTMELMEFPQIRCIAIIAEGVPERRARE 128 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTY 164 + ++ + +IGP G + P KIG I+ ++R GSV +S+SG ++ Sbjct: 129 ILVTSKEKNVVIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRPGSVAYVSKSGGMSN 188 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E S G + IGGD GT FID L F AD A + +V++GE+GG E Sbjct: 189 ELNNIISHTTDGVYEGIAIGGDRYPGTTFIDHLIRFEADPACKLMVLLGEVGGVEEYRVI 248 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 + +K+ KKPIV + G + +T GHAG+ + A K AM+EAGI Sbjct: 249 EAVKNGTI---KKPIVAWAIGTCSSMFKTEVQFGHAGSFANSELETAVAKNQAMREAGIY 305 Query: 282 I 282 + Sbjct: 306 V 306 >gi|167948589|ref|ZP_02535663.1| succinyl-CoA synthetase, alpha subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] gi|110589290|gb|ABG77154.1| succinyl-CoA synthetase alpha subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 144 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 60/107 (56%), Positives = 76/107 (71%), Gaps = 4/107 (3%) Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 DP+ GT FID LELF DE TE I+MVGEI GSAEEEAA+++K KP+V ++AG Sbjct: 1 DPINGTSFIDCLELFEKDEQTEGIIMVGEIAGSAEEEAAEYIKAHVS----KPVVAYIAG 56 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 TAPPG+ MGHAGA+ISGGKG A K A++ AG + SP+ G++ Sbjct: 57 VTAPPGKRMGHAGAIISGGKGTANAKFEALEAAGAHVVRSPSGDGQT 103 >gi|317419433|emb|CBN81470.1| ATP-citrate synthase [Dicentrarchus labrax] Length = 1092 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 84/309 (27%), Positives = 140/309 (45%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L K TK +V G+ +A G + V ++P K YW + Sbjct: 481 TTLFRKQTKAMVWGMQTRAVQGMLDFDYVCSRDGPSVAAMVYPFTGDHKQKFYWGHKEIL 540 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRV 113 +PV+ +A+A K+ + + + A D+ +E+++ +I I I EGIP ++ Sbjct: 541 LPVYKNMADAMKKHPEVDVLISFASLRSAFDSTVEAMQYPQIHTIAIIAEGIPEAQTRKM 600 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 601 IKMADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 660 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + Q Sbjct: 661 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGIQMIVVLGEIGGTEEYKICQ 720 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +++ GR KP+V + G A + GHAGA + A K A+++AG Sbjct: 721 GIRE----GRITKPVVCWCIGTCATMFTSEVQFGHAGACANQASETAVAKNQALRDAGAY 776 Query: 282 IAPSPARIG 290 + S +G Sbjct: 777 VPKSFDELG 785 >gi|85110776|ref|XP_963626.1| ATP-citrate synthase subunit 1 [Neurospora crassa OR74A] gi|30912708|sp|Q8X097|ACL1_NEUCR RecName: Full=Probable ATP-citrate synthase subunit 1; AltName: Full=ATP-citrate (pro-S-)-lyase 1; AltName: Full=Citrate cleavage enzyme subunit 1 gi|18376006|emb|CAB91740.2| probable ATP citrate lyase subunit 1 [Neurospora crassa] gi|28925312|gb|EAA34390.1| ATP-citrate synthase subunit 1 [Neurospora crassa OR74A] Length = 670 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 89/299 (29%), Positives = 130/299 (43%), Gaps = 24/299 (8%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGS----TYWTGGNVNVP 57 L + T+ V GL +A G + V G I+ G YW +P Sbjct: 48 LFNDKTRCFVYGLQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 107 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E +E +I I I EG+P + Sbjct: 108 VYQEVPKAIAKHPDVDVVVNFASSRSVYSSTMELMEYPQIKTIAIIAEGVPERRAREIAY 167 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 168 VAKKKGITIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 227 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + AD + +V++GE+GG E + Sbjct: 228 NIISQTTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPDCKILVLLGEVGGVEEYKVI--- 284 Query: 228 KDEAKRG-RKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 D K+G KPIV + G A +T GHAGA + A K +M+EAG + Sbjct: 285 -DAVKQGIITKPIVAWAIGTCASMFKTEVQFGHAGAFANSQLETAATKNKSMREAGFYV 342 >gi|156547848|ref|XP_001604320.1| PREDICTED: similar to ENSANGP00000012364 [Nasonia vitripennis] Length = 1087 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 89/309 (28%), Positives = 143/309 (46%), Gaps = 28/309 (9%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHP----KKGSTYWTGGNVNVP 57 L TK ++ G+ +A + + +T+ V ++P K YW V +P Sbjct: 479 LFSSKTKSIIWGMQTRAVQSMLDFDFVCRRTEPSVAALVYPFTGDHKQKFYWGHKEVLIP 538 Query: 58 VFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVR--- 112 + + +A + A+ + + A D+ IE+++ +I I I EGIP +M R Sbjct: 539 SYKNMKDAMAKHPDADVMITFASLRSAYDSAIETLQFPQIKTIAIIAEGIPE-NMTRKLI 597 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTY 164 +KA +K + +IGP G + P KIG I+ ++R GSV +SRSG ++ Sbjct: 598 LKANEKKVT--IIGPATVGGVKPGCFKIGNTGGMMDNILHSKLYRPGSVAYVSRSGGMSN 655 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E S+ G V IGGD GT F+D + + D + I+++GE+GG E E Sbjct: 656 ELNNIVSKASNGVFEGVAIGGDRYPGTTFMDHIMRYQNDPDAKLIILLGEVGGVEEYEVC 715 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 + LK +KR KP+V + G A + GHAG++ A K A+K AG Sbjct: 716 EALK--SKR-ITKPLVAWCIGTCASMFNSEVQFGHAGSIAHSNLETAVAKNEALKAAGAY 772 Query: 282 IAPSPARIG 290 + S +G Sbjct: 773 VPDSFDNLG 781 >gi|316969047|gb|EFV53211.1| putative LIM domain protein [Trichinella spiralis] Length = 770 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 50/119 (42%), Positives = 69/119 (57%), Gaps = 8/119 (6%) Query: 23 FHTEQAILYCQTQVVGGIHP-----KKGST--YWTGGNVNVPVFTTVAEAKERTAANASV 75 FH + +C P K+ T Y T N V +A + T A+A++ Sbjct: 578 FHEKDGRAFCHKDYFTNFTPTCHGCKRPITGHYITALNCEWHSDCFVQQAVKETGADATI 637 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS-RLIGPNCPGIL 133 +YVP + DAI E+I+A++PLIV ITEGIP LDMV+VK +L K S RL+GPNCPG++ Sbjct: 638 LYVPAQASADAIHEAIDAKVPLIVVITEGIPQLDMVKVKQKLLKQSDCRLVGPNCPGLI 696 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/57 (66%), Positives = 46/57 (80%) Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+V F+AG TAPPGR MGHAGA+ISGGKG A KI A+KEAG+ + SPA++G SL Sbjct: 702 KPVVSFIAGVTAPPGRRMGHAGAIISGGKGTAAHKIEALKEAGVTVVMSPAQMGISL 758 >gi|268557936|ref|XP_002636958.1| Hypothetical protein CBG09435 [Caenorhabditis briggsae] Length = 1099 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 84/316 (26%), Positives = 136/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L + NTK ++ G KA G + VV +P K Y+ + +P Sbjct: 488 LFENNTKAIIWGQQHKAIQGMLDFDFVCGRHSPSVVASTYPFTGDNKQKYYFGQKEILIP 547 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A V + + ++E+++ ++I +I I EG+P ++ Sbjct: 548 AYKSMAKAFASHPDATVMVTFASMRSVFETVLEALQFSQIKVIAIIAEGVPENQTRKLLK 607 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 E LIGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 608 VAEDKGVTLIGPATVGGIKPGCFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 667 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD G+ + D + + D+ + IV++GE+GG E + L Sbjct: 668 NIISQNTNGVYEGIAIGGDRYPGSTYTDHVLRYQHDDRVKMIVLLGEVGGVEEYRIVELL 727 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K + KP+V + G A + GHAGA G A K A++ AG + Sbjct: 728 K---TKQITKPLVAWCIGTCADHITSEVQFGHAGASAHGEGETAACKNTALRSAGALVPS 784 Query: 285 SPARIGRSLVELLGSL 300 S +G + E L Sbjct: 785 SFDDLGNKIRETYEDL 800 >gi|309361866|emb|CAP29152.2| hypothetical protein CBG_09435 [Caenorhabditis briggsae AF16] Length = 1111 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 84/316 (26%), Positives = 136/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L + NTK ++ G KA G + VV +P K Y+ + +P Sbjct: 494 LFENNTKAIIWGQQHKAIQGMLDFDFVCGRHSPSVVASTYPFTGDNKQKYYFGQKEILIP 553 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A V + + ++E+++ ++I +I I EG+P ++ Sbjct: 554 AYKSMAKAFASHPDATVMVTFASMRSVFETVLEALQFSQIKVIAIIAEGVPENQTRKLLK 613 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 E LIGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 614 VAEDKGVTLIGPATVGGIKPGCFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 673 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD G+ + D + + D+ + IV++GE+GG E + L Sbjct: 674 NIISQNTNGVYEGIAIGGDRYPGSTYTDHVLRYQHDDRVKMIVLLGEVGGVEEYRIVELL 733 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K + KP+V + G A + GHAGA G A K A++ AG + Sbjct: 734 K---TKQITKPLVAWCIGTCADHITSEVQFGHAGASAHGEGETAACKNTALRSAGALVPS 790 Query: 285 SPARIGRSLVELLGSL 300 S +G + E L Sbjct: 791 SFDDLGNKIRETYEDL 806 >gi|154315096|ref|XP_001556871.1| hypothetical protein BC1G_04587 [Botryotinia fuckeliana B05.10] gi|150847550|gb|EDN22743.1| hypothetical protein BC1G_04587 [Botryotinia fuckeliana B05.10] Length = 384 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 85/135 (62%), Gaps = 1/135 (0%) Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 AV T++ GLGQS +G+GGD + GT F+D L++F D+ T+ I+++GEIGG AE EAA Sbjct: 4 AVASTTRAGLGQSLCIGMGGDVLAGTNFVDALKIFEHDDDTDGIIIIGEIGGEAELEAAD 63 Query: 226 FLKDEAKRG-RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 ++K+ KR KPI VAG A PG+ MGHAGA G+ A KI A + G+ + Sbjct: 64 WIKEYKKRSPNPKPITALVAGVHAAPGKVMGHAGAFTLPGEPDALTKIKAFENVGVTMVN 123 Query: 285 SPARIGRSLVELLGS 299 PA+ G ++ LL S Sbjct: 124 HPAKFGTAMKTLLES 138 >gi|322698613|gb|EFY90382.1| ATP-citrate synthase subunit 1 [Metarhizium acridum CQMa 102] Length = 664 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 84/298 (28%), Positives = 131/298 (43%), Gaps = 22/298 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGS----TYWTGGNVNVP 57 L + T+ V GL +A G + V G I+ G YW +P Sbjct: 43 LFNDKTRCFVYGLQPRAVQGMLDFDFICKRKTPSVAGIIYTFGGQFVSKMYWGTSETLLP 102 Query: 58 VFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E ++ +I I I EG+P + Sbjct: 103 VYQQVDKAMAKHPDVDVVVNFASSRSVYSSTMELMQYPQIKTIAIIAEGVPERRAREIAH 162 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P S KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 163 VAKKKGVTIIGPATVGGIKPGSFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 222 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD GT FID + + AD + +V++GE+GG E + + + Sbjct: 223 NIISQNTDGVYEGIAIGGDRYPGTTFIDHMLRYQADPDCKILVLLGEVGGVEEYKVIEAV 282 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 K KPIV + G A +T GHAG+ + + A K +M+EAG + Sbjct: 283 KQGII---TKPIVAWAIGTCASMFKTEVQFGHAGSFANSQRETAATKNKSMREAGFHV 337 >gi|66530142|ref|XP_623083.1| PREDICTED: ATP-citrate synthase isoform 1 [Apis mellifera] Length = 1086 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 82/286 (28%), Positives = 133/286 (46%), Gaps = 22/286 (7%) Query: 28 AILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDA 86 AI+Y T G H +K YW V +PV+ + +A + T A+ V + A D+ Sbjct: 514 AIVYPFT----GDHKQK--FYWGHKEVLIPVYKQMRDAMTKHTDADVMVTFASLRSAYDS 567 Query: 87 IIESIE-AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG---- 141 +E+++ +I I I EGIP ++ ++ +IGP G + P KIG Sbjct: 568 AVETMQFPQIRTIAIIAEGIPENMTRKLILMAQQKGITIIGPATVGGVKPGCFKIGNTGG 627 Query: 142 ----IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 I+ ++R GSV +SRSG ++ E S+ G V IGGD GT F++ + Sbjct: 628 MMDNILHSKLYRPGSVAYVSRSGGMSNELNNIISKATNGVLEGVAIGGDRYPGTTFMNHI 687 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---M 254 + + + IV++GE+GG E E + LK + KP++ + G A + Sbjct: 688 MRYQENPEVKLIVLLGEVGGVEEYEVCEALK---TKKITKPLIAWCIGTCASMFNSEVQF 744 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GHAG++ A K A+KEAG + S +G + + +L Sbjct: 745 GHAGSIAHTNLETASAKNIALKEAGAYVPDSFDNLGDLMQTVYSNL 790 >gi|258572700|ref|XP_002545112.1| ATP-citrate synthase subunit 1 [Uncinocarpus reesii 1704] gi|237905382|gb|EEP79783.1| ATP-citrate synthase subunit 1 [Uncinocarpus reesii 1704] Length = 648 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 74/249 (29%), Positives = 116/249 (46%), Gaps = 18/249 (7%) Query: 48 YWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ + +A + + + V + + +E ++ +I I I EG+ Sbjct: 77 YWGTSETLLPVYQSAGKAMAKHSDVDVVVNFASSRSVYSSTMELMQYPQIKTIAIIAEGV 136 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 137 PERRAREIMVTAKEKGVTIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 196 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E SQ G + IGGD GT F+D + F AD A + ++++GE+GG Sbjct: 197 KSGGMSNELNNIVSQTTDGVYEGIAIGGDRYPGTTFLDHMLRFQADPACKILLLLGEVGG 256 Query: 218 SAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKIN 273 E D K G KP+V + G A +T GHAGA + A K Sbjct: 257 VEEYRVI----DAVKNGTITKPVVAWAIGTCASMFKTEVQFGHAGASANSQLETAVMKNQ 312 Query: 274 AMKEAGICI 282 AM+EAGI + Sbjct: 313 AMREAGIHV 321 >gi|71896389|ref|NP_001025711.1| ATP-citrate synthase [Gallus gallus] gi|60098703|emb|CAH65182.1| hypothetical protein RCJMB04_6f14 [Gallus gallus] Length = 1101 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 84/319 (26%), Positives = 144/319 (45%), Gaps = 24/319 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVN 55 + L ++TK ++ G+ +A G + + V ++P G YW + Sbjct: 490 TTLFSRHTKAIIWGMQTRAVQGMLDFDYICSRDEPSVAAMVYPFTGDHRQKFYWGHKEIL 549 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRV 113 +PV+ +++A ++ + + + A D+ +E++ +I I I EGIP ++ Sbjct: 550 IPVYKNMSDAMRKHPEVDVLINFASLRSAYDSTVETMNYPQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 +K IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKAADKKGVTNIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KP+V + G A + GHAGA + A K A+KEAG+ Sbjct: 730 GIKE----GRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVF 785 Query: 282 IAPSPARIGRSLVELLGSL 300 + S +G + + L Sbjct: 786 VPRSFDELGEVIQSVYQDL 804 >gi|237874159|ref|NP_001153852.1| ATP citrate lyase [Acyrthosiphon pisum] Length = 1092 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 88/317 (27%), Positives = 142/317 (44%), Gaps = 24/317 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVNVP 57 L NT+ +V G+ +A + + V ++P G YW V +P Sbjct: 484 LFGSNTRAIVWGMQTRAVQSMLDFDFVCRRHEPSVACLVYPFTGDHKLKFYWGHKEVLIP 543 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 V+ + +A + A+ V + A D+ IE++ +I I I EGIP +M R Sbjct: 544 VYKRMEDAMLKHQNADVLVNFASLRSAYDSTIETLNYPQIRTIAIIAEGIPE-NMTRKLI 602 Query: 116 RL-EKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 L + +IGP G L P KIG I+ ++R GSV +SRSG ++ Sbjct: 603 LLANEKKVTVIGPATVGGLKPGGFKIGNTGGMMDNILHSKLYRAGSVAYVSRSGGMSNVL 662 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 S+ G V IGGD GT F+D + + AD + IV++GE+GG+ E E + Sbjct: 663 NNIISRTTDGVYEGVAIGGDRYPGTTFMDHIMRYQADPEIKMIVLLGEVGGTEEYEVCEA 722 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 L ++ KP+V + G A + GHAG+ + + A K +++EAG + Sbjct: 723 L---TQKKITKPLVAWCIGTCASMFTSEVQFGHAGSCANSDQETATTKNASLREAGAFVP 779 Query: 284 PSPARIGRSLVELLGSL 300 S +G + ++ L Sbjct: 780 TSFDFLGDIIHDVYKKL 796 >gi|225557292|gb|EEH05578.1| ATP-citrate synthase subunit 1 [Ajellomyces capsulatus G186AR] Length = 748 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 122/266 (45%), Gaps = 16/266 (6%) Query: 48 YWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ V +A + + V + + +E ++ +I I I EG+ Sbjct: 177 YWGTSETLLPVYQAVGKAIAKHPDVDTVVNFASSRSVYSSTMELMQYPQIKSIAIIAEGV 236 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 237 PERRAREIMVAAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 296 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E SQ G V IGGD GT FID L + AD + +V++GE+GG Sbjct: 297 KSGGMSNELNNIISQTTDGVYEGVAIGGDRYPGTTFIDHLLRYQADSECKILVLLGEVGG 356 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + ++D KP+V + G A +T GHAGA + A K Sbjct: 357 VEEYRVIEAVRDGTI---TKPVVAWAIGTCASLFKTEVQFGHAGASANSELETAVMKNKC 413 Query: 275 MKEAGICIAPSPARIGRSLVELLGSL 300 M+EAGI + + + ++L E+ L Sbjct: 414 MREAGIHVPETFEELPQTLAEVYKKL 439 >gi|154277252|ref|XP_001539467.1| ATP-citrate synthase subunit 1 [Ajellomyces capsulatus NAm1] gi|150413052|gb|EDN08435.1| ATP-citrate synthase subunit 1 [Ajellomyces capsulatus NAm1] gi|240280198|gb|EER43702.1| ATP-citrate synthase subunit 1 [Ajellomyces capsulatus H143] Length = 659 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 122/266 (45%), Gaps = 16/266 (6%) Query: 48 YWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ V +A + + V + + +E ++ +I I I EG+ Sbjct: 88 YWGTSETLLPVYQAVGKAIAKHPDVDTVVNFASSRSVYSSTMELMQYPQIKSIAIIAEGV 147 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 148 PERRAREIMVAAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 207 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E SQ G V IGGD GT FID L + AD + +V++GE+GG Sbjct: 208 KSGGMSNELNNIISQTTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPECKILVLLGEVGG 267 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + ++D KP+V + G A +T GHAGA + A K Sbjct: 268 VEEYRVIEAVRDGTI---TKPVVAWAIGTCASLFKTEVQFGHAGASANSELETAVMKNKC 324 Query: 275 MKEAGICIAPSPARIGRSLVELLGSL 300 M+EAGI + + + ++L E+ L Sbjct: 325 MREAGIHVPETFEELPQTLAEVYKKL 350 >gi|226293494|gb|EEH48914.1| ATP-citrate synthase subunit 1 [Paracoccidioides brasiliensis Pb18] Length = 659 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 76/266 (28%), Positives = 121/266 (45%), Gaps = 16/266 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ V +A + +V+ + + +E ++ +I LI I EG+ Sbjct: 88 YWGTSETLLPVYQEVEKAMSKHPDVDTVVNFASSRSVYSSTMELMQYPQIKLIAIIAEGV 147 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 148 PERRAREIMVAAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 207 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E SQ G V IGGD GT FID L + AD + ++++GE+GG Sbjct: 208 KSGGMSNELNNIISQNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPKCKILLLLGEVGG 267 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + D KP+V + G A +T GHAGA + A K Sbjct: 268 VEEYRVIDAVHDGTI---TKPVVAWAIGTCASLFKTEVQFGHAGASANSELETAVMKNKY 324 Query: 275 MKEAGICIAPSPARIGRSLVELLGSL 300 M+E+GI + + + R L ++ L Sbjct: 325 MRESGIHVPDTFEELPRVLADVYKKL 350 >gi|325096706|gb|EGC50016.1| ATP-citrate synthase subunit 1 [Ajellomyces capsulatus H88] Length = 659 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 122/266 (45%), Gaps = 16/266 (6%) Query: 48 YWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ V +A + + V + + +E ++ +I I I EG+ Sbjct: 88 YWGTSETLLPVYQAVGKAIAKHPDVDTVVNFASSRSVYSSTMELMQYPQIKSIAIIAEGV 147 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 148 PERRAREIMVAAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 207 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E SQ G V IGGD GT FID L + AD + +V++GE+GG Sbjct: 208 KSGGMSNELNNIISQTTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPECKILVLLGEVGG 267 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + ++D KP+V + G A +T GHAGA + A K Sbjct: 268 VEEYRVIEAVRDGTI---TKPVVAWAIGTCASLFKTEVQFGHAGASANSELETAVMKNKC 324 Query: 275 MKEAGICIAPSPARIGRSLVELLGSL 300 M+EAGI + + + ++L E+ L Sbjct: 325 MREAGIHVPETFEELPQTLAEVYKKL 350 >gi|225684099|gb|EEH22383.1| ATP-citrate synthase [Paracoccidioides brasiliensis Pb03] Length = 725 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 76/266 (28%), Positives = 121/266 (45%), Gaps = 16/266 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ V +A + +V+ + + +E ++ +I LI I EG+ Sbjct: 154 YWGTSETLLPVYQEVEKAMSKHPDVDTVVNFASSRSVYSSTMELMQYPQIKLIAIIAEGV 213 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 214 PERRAREIMVAAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 273 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E SQ G V IGGD GT FID L + AD + ++++GE+GG Sbjct: 274 KSGGMSNELNNIISQNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPKCKILLLLGEVGG 333 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + D KP+V + G A +T GHAGA + A K Sbjct: 334 VEEYRVIDAVHDGTI---TKPVVAWAIGTCASLFKTEVQFGHAGASANSELETAVMKNKY 390 Query: 275 MKEAGICIAPSPARIGRSLVELLGSL 300 M+E+GI + + + R L ++ L Sbjct: 391 MRESGIHVPDTFEELPRVLADVYKKL 416 >gi|50554757|ref|XP_504787.1| YALI0E34793p [Yarrowia lipolytica] gi|49650656|emb|CAG80394.1| YALI0E34793p [Yarrowia lipolytica] Length = 650 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 87/313 (27%), Positives = 136/313 (43%), Gaps = 24/313 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGS----TYWTGGNVNVP 57 L +T+ V GL +A G + V G I+P G YW +P Sbjct: 23 LFHNHTRSFVYGLQPRACQGMLDFDFICKRENPSVAGVIYPFGGQFVTKMYWGTKETLLP 82 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E +E + I I EG+P + Sbjct: 83 VYQQVEKAAAKHPEVDVVVNFASSRSVYSSTMELLEYPQFRTIAIIAEGVPERRAREILH 142 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + +K +IGP G + P K+G I+ ++R GSV +S+SG ++ E Sbjct: 143 KAQKKGVTIIGPATVGGIKPGCFKVGNTGGMMDNIVASKLYRPGSVAYVSKSGGMSNELN 202 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S G + IGGD GT FID + + AD + IV++GE+GG E + + Sbjct: 203 NIISHTTDGVYEGIAIGGDRYPGTTFIDHILRYEADPKCKIIVLLGEVGGVEEYRVIEAV 262 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ G+ KKPIV + G A +T GHAG++ + A+ K AMK AG + Sbjct: 263 KN----GQIKKPIVAWAIGTCASMFKTEVQFGHAGSMANSDLETAKAKNAAMKSAGFYVP 318 Query: 284 PSPARIGRSLVEL 296 + + L EL Sbjct: 319 DTFEDMPEVLAEL 331 >gi|50540366|ref|NP_001002649.1| ATP-citrate synthase [Danio rerio] gi|49904342|gb|AAH76484.1| ATP citrate lyase [Danio rerio] Length = 1092 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 87/319 (27%), Positives = 143/319 (44%), Gaps = 24/319 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L TK +V G+ +A G + + V ++P K YW + Sbjct: 481 TTLFSNLTKSIVWGMQTRAVQGMLDFDYVCSRQEPSVAAMVYPFTGDHKQKFYWGHKEIL 540 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PV+ +A+A K+ + + + A D+ IE+++ +I I I EGIP ++ Sbjct: 541 LPVYKNMADAMKKHPEVDVLISFASLRSAYDSTIETMQFPQIHTIAIIAEGIPEALTRKI 600 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 601 IKMADEKGITIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 660 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ FID + + + IV++GEIGG+ E + Sbjct: 661 LNNIISRTTDGVYEGVAIGGDRYPGSVFIDHVLRYQDTPGVKMIVVLGEIGGNEEYKICN 720 Query: 226 FLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K+ GR KP+V + G A + GHAGA + A K A++EAG Sbjct: 721 AIKE----GRITKPVVCWCIGTCATLFSSEVQFGHAGACANQASETAVAKNKALEEAGAF 776 Query: 282 IAPSPARIGRSLVELLGSL 300 + S +G + + +L Sbjct: 777 VPKSFDELGDVIKSVYDNL 795 >gi|239614826|gb|EEQ91813.1| ATP-citrate synthase subunit 1 [Ajellomyces dermatitidis ER-3] gi|327352262|gb|EGE81119.1| ATP-citrate synthase subunit 1 [Ajellomyces dermatitidis ATCC 18188] Length = 659 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 122/266 (45%), Gaps = 16/266 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ V +A + +V+ + + +E ++ +I I I EG+ Sbjct: 88 YWGTSETLLPVYQAVEKAMTKHPDVDTVVNFASSRSVYSSTMELMQYPQIKSIAIIAEGV 147 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 148 PERRAREIMVAAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 207 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E SQ G V IGGD GT FID L + AD + +V++GE+GG Sbjct: 208 KSGGMSNELNNIISQNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPECKILVLLGEVGG 267 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + ++D KP+V + G A +T GHAGA + A K Sbjct: 268 VEEYRVIEAVRDGTI---TKPVVAWAIGTCASLFKTEVQFGHAGASANSELETAVMKNKC 324 Query: 275 MKEAGICIAPSPARIGRSLVELLGSL 300 M+EAGI + + + + L E+ L Sbjct: 325 MREAGIHVPDTFEDLPQVLAEVYKKL 350 >gi|171689596|ref|XP_001909738.1| hypothetical protein [Podospora anserina S mat+] gi|170944760|emb|CAP70871.1| unnamed protein product [Podospora anserina S mat+] Length = 668 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 90/318 (28%), Positives = 139/318 (43%), Gaps = 28/318 (8%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGS----TYWTGGNVNVP 57 L + T+ V G+ +A G + V G I+ G YW +P Sbjct: 46 LFNDKTRCFVYGMQPRAVQGMLDFDFICKRATPSVAGIIYTFGGQFVSKMYWGTSETLLP 105 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E +E +I I I EG+P + Sbjct: 106 VYQEVPKAISKHPDVDVVVNFASSRSVYQSTMELMEYPQIKTIAIIAEGVPERRAREIAH 165 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 166 IAKKKGVTIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 225 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + G V IGGD GT FID L + AD + +V++GE+GG E + Sbjct: 226 NIIANNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPGCKILVLLGEVGGVEEYKVI--- 282 Query: 228 KDEAKRG-RKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 D K+G KPIV + G A +T GHAGA + A+ K +M+EAG + Sbjct: 283 -DAVKQGIITKPIVAWAIGTCASMFKTEVQFGHAGAFANSQLETAKMKNESMREAGFYVP 341 Query: 284 PS----PARIGRSLVELL 297 + PA +G+ +L+ Sbjct: 342 ETFEDMPALLGQVYEKLV 359 >gi|320586931|gb|EFW99594.1| ATP-citrate synthase subunit 1 [Grosmannia clavigera kw1407] Length = 663 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/299 (28%), Positives = 132/299 (44%), Gaps = 24/299 (8%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGS----TYWTGGNVNVP 57 L + T+ LV GL +A G + V G ++ G YW +P Sbjct: 42 LFNNKTRCLVYGLQPRAVQGMLDFDFICKRPTPSVAGIVYTFGGQFVSKMYWGTSETLLP 101 Query: 58 VFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V++A E+ + V + + +E +E ++I I I EG+P + Sbjct: 102 VYQEVSKAVEKHPDVDVVVNFASSRSVYSSTLELMEYSQIKTIAIIAEGVPERRAREIAH 161 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 K +IGP G + P KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 162 IANKKGITIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 221 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 +Q G V IGGD GT FID + + AD + +V++GE+GG E + Sbjct: 222 NIIAQNTDGVYEGVAIGGDRYPGTTFIDHMLRYQADPDCKILVLLGEVGGVEEYKVI--- 278 Query: 228 KDEAKRG-RKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 D K+G KPIV + G A +T GHAG+ + A K M++AG + Sbjct: 279 -DAVKQGIITKPIVAWAIGTCASMFKTEVQFGHAGSFANSQLETAAMKNKQMRDAGFFV 336 >gi|261190614|ref|XP_002621716.1| ATP-citrate synthase subunit 1 [Ajellomyces dermatitidis SLH14081] gi|239591139|gb|EEQ73720.1| ATP-citrate synthase subunit 1 [Ajellomyces dermatitidis SLH14081] Length = 659 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 122/266 (45%), Gaps = 16/266 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ V +A + +V+ + + +E ++ +I I I EG+ Sbjct: 88 YWGTSETLLPVYQAVEKAMAKHPDVDTVVNFASSRSVYSSTMELMQYPQIKSIAIIAEGV 147 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 148 PERRAREIMVAAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 207 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E SQ G V IGGD GT FID L + AD + +V++GE+GG Sbjct: 208 KSGGMSNELNNIISQNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPECKILVLLGEVGG 267 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + ++D KP+V + G A +T GHAGA + A K Sbjct: 268 VEEYRVIEAVRDGTI---TKPVVAWAIGTCASLFKTEVQFGHAGASANSELETAVMKNKC 324 Query: 275 MKEAGICIAPSPARIGRSLVELLGSL 300 M+EAGI + + + + L E+ L Sbjct: 325 MREAGIHVPDTFEDLPQVLAEVYKKL 350 >gi|315053179|ref|XP_003175963.1| ATP-citrate synthase subunit 1 [Arthroderma gypseum CBS 118893] gi|311337809|gb|EFQ97011.1| ATP-citrate synthase subunit 1 [Arthroderma gypseum CBS 118893] Length = 650 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 18/249 (7%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ +A + A +V+ + + +E +E +I I I EG+ Sbjct: 80 YWGTSETLLPVYQDTNKAMAKHADVDTVVNFASSRSVYSSTMELMECPQIKTIAIIAEGV 139 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + R ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 140 PERRAREIMVRAKEKGVTIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 199 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E Q G V IGGD GT F+D L + A+ + ++++GE+GG Sbjct: 200 KSGGMSNELNNIVCQTTDGVCEGVAIGGDRYPGTTFLDHLLRYQANPECKILLLLGEVGG 259 Query: 218 SAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKIN 273 E D K G KP+V + G A +T GHAGA + A K Sbjct: 260 VEEYRVI----DAVKNGTITKPVVAWAIGTCASMFKTEVQFGHAGASANSDLETAVTKNK 315 Query: 274 AMKEAGICI 282 +M+EAGI + Sbjct: 316 SMREAGIHV 324 >gi|302678201|ref|XP_003028783.1| hypothetical protein SCHCODRAFT_78811 [Schizophyllum commune H4-8] gi|300102472|gb|EFI93880.1| hypothetical protein SCHCODRAFT_78811 [Schizophyllum commune H4-8] Length = 1170 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 37/304 (12%) Query: 6 DKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVNVPVF 59 D+ T+ V GL +A G + + V I+P G YW +PV+ Sbjct: 554 DEKTRSFVYGLQPRAIQGMLDFDYSCGRDTPSVAAMIYPFGGHHIQKFYWGTKETLLPVY 613 Query: 60 TTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPL--IVCITEGIP------VLDM 110 T+V EA K+ + V + + +E + L I I EG+P +L + Sbjct: 614 TSVEEAVKKHPDVDVVVNFASSRSVYSSTLECFKYADTLKAIALIAEGVPERHAREILHL 673 Query: 111 VRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTL 162 R K L +IGP G + P +IG I+ ++R GSVG +S+SG + Sbjct: 674 ARQKGVL------IIGPATVGGIKPGCFRIGNSGGMMDNIIASKLYRPGSVGYVSKSGGM 727 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 + E S G + IGGD G+ FID L + DE + +V++GE+GG E Sbjct: 728 SNELNNMLSLFTNGTYEGIAIGGDRYPGSTFIDHLMRYEKDENCKMLVLLGEVGGVEEYR 787 Query: 223 AAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEA 278 + K+G+ KPIV + G A T GHAG++ + A+ K M+EA Sbjct: 788 VVE----AVKQGKITKPIVAWAIGTCAKMFTTEVQFGHAGSMANSELETADTKNRIMREA 843 Query: 279 GICI 282 G + Sbjct: 844 GFLV 847 >gi|17557344|ref|NP_506267.1| hypothetical protein B0365.1 [Caenorhabditis elegans] gi|3873757|emb|CAB02690.1| C. elegans protein B0365.1, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 1099 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 81/316 (25%), Positives = 137/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L + +TK ++ G KA G + VV +P K Y+ + +P Sbjct: 488 LFENDTKAIIWGQQHKAIQGMLDFDFVCRRHSPSVVASTYPFTGDNKQKYYFGQKEILIP 547 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A V + + ++E+++ +I +I I EG+P ++ Sbjct: 548 AYKSMAKAFASHPDATVMVTFASMRSVFETVLEALQFTQIKVIAIIAEGVPENQTRKLLK 607 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 E LIGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 608 IAEDKGVTLIGPATVGGIKPGCFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 667 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD G+ + D + + D+ + IV++GE+GG E + L Sbjct: 668 NIISQNTNGVYEGIAIGGDRYPGSTYTDHVMRYQHDDRVKMIVLLGEVGGIEEYRIVELL 727 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ + KP++ + G A + GHAGA +G A K A++ AG + Sbjct: 728 KE---KKITKPLIAWCIGTCADHITSEVQFGHAGASANGQGETAACKNTALRTAGALVPD 784 Query: 285 SPARIGRSLVELLGSL 300 S +G + + L Sbjct: 785 SFDDLGNKIRQTYEEL 800 >gi|302412753|ref|XP_003004209.1| ATP-citrate synthase subunit 1 [Verticillium albo-atrum VaMs.102] gi|261356785|gb|EEY19213.1| ATP-citrate synthase subunit 1 [Verticillium albo-atrum VaMs.102] Length = 615 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/298 (28%), Positives = 129/298 (43%), Gaps = 22/298 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGS----TYWTGGNVNVP 57 L + T+ V GL +A G + V G I+ G YW +P Sbjct: 34 LFNDKTRCFVYGLQPRAVQGMLDFDFICKRKTPSVAGIIYTFGGQFVSKMYWGTSETLLP 93 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E +E +I I I EG+P + Sbjct: 94 VYQEVPKAIAKHPDVDTVVNFASSRSVYSSTMELMEFPQIKTIAIIAEGVPERRAREIAH 153 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + K +IGP G + P KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 154 KAAKKGITIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 213 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S G V IGGD GT FID L + AD + +V++GE+GG E + + + Sbjct: 214 NIISNNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPECKVLVLLGEVGGVEEYKVIKAV 273 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 ++ KPIV + G A +T GHAGA + A+ K MKEAG + Sbjct: 274 EEGVI---TKPIVAWAIGTCASMFKTEVQFGHAGAFANSTLETAKTKNEKMKEAGFHV 328 >gi|255956565|ref|XP_002569035.1| Pc21g20480 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590746|emb|CAP96945.1| Pc21g20480 [Penicillium chrysogenum Wisconsin 54-1255] Length = 655 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 116/248 (46%), Gaps = 16/248 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ V +A + +V+ + + +E +E +I I I EG+ Sbjct: 86 YWGTSETLLPVYQDVEKAMAKHPDVDTVVNFASSRSVYSSTMELMENPQIRSIAIIAEGV 145 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 146 PERRAREIMVTAKEKGITIIGPATVGGIKPGAYKIGNTGGMMDNIVASKLYRKGSVGYVS 205 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E SQ G V IGGD GT FID L + A+ + +V++GE+GG Sbjct: 206 KSGGMSNELNNIISQNTDGVFEGVAIGGDRYPGTTFIDHLLRYQAEPECKILVLLGEVGG 265 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K+ KP+V + G A +T GHAGA + A K A Sbjct: 266 VEEYRVIEAIKNGTI---TKPVVAWAIGTCASMFKTEVQFGHAGASANSDLETAVTKNKA 322 Query: 275 MKEAGICI 282 M+EAGI + Sbjct: 323 MREAGIHV 330 >gi|323448894|gb|EGB04787.1| hypothetical protein AURANDRAFT_72443 [Aureococcus anophagefferens] Length = 1127 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 83/284 (29%), Positives = 130/284 (45%), Gaps = 23/284 (8%) Query: 36 VVGGIHPKKGSTY----WTGGNVNVPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIES 90 V ++P +G+ Y W VPV+T++AEA + A+ V + D +E+ Sbjct: 543 VAAMVYPFQGNHYVKFYWGTEETLVPVYTSIAEAASKHGDASCLVNFASYRSVYDTCMET 602 Query: 91 --IEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG------- 141 + A+I + I EG+P + A E++ L+GP G + P +IG Sbjct: 603 FKLSAQIRTVAIIAEGVPEAQTRDIAAAAEEAGVGLVGPATVGGIKPGCFRIGNTGGMLD 662 Query: 142 -IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 I+ ++R GSV +S+SG ++ E ++ G V IGGD G+ FID L + Sbjct: 663 NIVMSKLYRPGSVCYVSKSGGMSNELNNIIARSSDGVCEGVAIGGDRYPGSRFIDHLLRY 722 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGR---TMGH 256 + + +V++GE+GG E + L+ GR KP+V + G A GH Sbjct: 723 NDNPDCQILVLLGEVGGVDEYDVCAALES----GRIDKPLVAWCIGTCASAFSFEVQFGH 778 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 AGA G A DK A+ +AG + S A G L E+ L Sbjct: 779 AGACARGLGEAAVDKNAALAKAGAVVPRSFAEFGARLSEVYALL 822 >gi|268325586|emb|CBH39174.1| putative ATP-citrate synthase, alpha subunit [uncultured archaeon] Length = 621 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 18/244 (7%) Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRV 113 +P++ + A K A+ + + A D +E++ I + I EGIP ++ Sbjct: 67 LPMYNKLGTAVKNHPDADVVINFASFRSAYDVSVEALNYPTIKTVAIIAEGIPERQTRQL 126 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 A +K +IGP G KIG ++ ++R GSVG +S+SG + E Sbjct: 127 IALRKKLGKWIIGPATVGGFVAGGFKIGNAGGALSNLLMSKLYRPGSVGFVSKSGGMLNE 186 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 ++ G + IGGD G+ ++ L+ + A+ + +V++GE+GG E E Sbjct: 187 MANMIARNSDGVYEGIAIGGDKYPGSTLVEHLQRYEANPEIKMMVVLGEVGGDDEYEIVD 246 Query: 226 FLKDEAKRGR-KKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KD GR KKP+V +V G K P GHAGA+ G A+ K A+KEAG Sbjct: 247 AIKD----GRLKKPLVAWVTGTCAKVFPSEVQFGHAGAMARGEAETADAKNAALKEAGAY 302 Query: 282 IAPS 285 + S Sbjct: 303 VPNS 306 >gi|323445398|gb|EGB02026.1| hypothetical protein AURANDRAFT_39545 [Aureococcus anophagefferens] Length = 478 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 82/280 (29%), Positives = 129/280 (46%), Gaps = 23/280 (8%) Query: 40 IHPKKGSTY----WTGGNVNVPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIES--IE 92 ++P +G+ Y W VPV+T++AEA + A+ V + D +E+ + Sbjct: 2 VYPFQGNHYVKFYWGTEETLVPVYTSIAEAASKHGDASCLVNFASYRSVYDTCMETFKLS 61 Query: 93 AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMP 144 A+I + I EG+P + A E++ L+GP G + P +IG I+ Sbjct: 62 AQIRTVAIIAEGVPEAQTRDIAAAAEEAGVGLVGPATVGGIKPGCFRIGNTGGMLDNIVM 121 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 ++R GSV +S+SG ++ E ++ G V IGGD G+ FID L + + Sbjct: 122 SKLYRPGSVCYVSKSGGMSNELNNIIARSSDGVCEGVAIGGDRYPGSRFIDHLLRYNDNP 181 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGR---TMGHAGAV 260 + +V++GE+GG E + L+ GR KP+V + G A GHAGA Sbjct: 182 DCQILVLLGEVGGVDEYDVCAALES----GRIDKPLVAWCIGTCASAFSFEVQFGHAGAC 237 Query: 261 ISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 G A DK A+ +AG + S A G L E+ L Sbjct: 238 ARGLGEAAVDKNAALAKAGAVVPRSFAEFGARLSEVYALL 277 >gi|307197888|gb|EFN78987.1| ATP-citrate synthase [Harpegnathos saltator] Length = 1087 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 79/276 (28%), Positives = 128/276 (46%), Gaps = 22/276 (7%) Query: 28 AILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDA 86 AI+Y T G H +K YW V +PV+ + +A + A+ V + A ++ Sbjct: 515 AIVYPFT----GDHKQK--FYWGHKEVLIPVYKQMKDAMAKHKDADVMVTFASLRSAYES 568 Query: 87 IIESIE-AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG---- 141 +E+++ +I I I EGIP ++ ++ + +IGP G + P KIG Sbjct: 569 TMETMQFPQIRTIAIIAEGIPENMTRKLILTAQQKNVTIIGPATVGGVKPGCFKIGNTGG 628 Query: 142 ----IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 I+ ++R GSV +SRSG ++ E S+ G V IGGD GT F+D + Sbjct: 629 MMDNILHSKLYRPGSVAYVSRSGGMSNELNNIISKASNGVLEGVAIGGDRYPGTTFMDHI 688 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---M 254 + D + I+++GE+GG E E + LK + KP++ + G A + Sbjct: 689 MRYQNDSDAKLIILLGEVGGVEEYEVCEALKTDKI---TKPLIAWCIGTCASMFSSEVQF 745 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 GHAG++ A K A+K AG + S +G Sbjct: 746 GHAGSIAHTNLETASAKNAALKAAGAYVPESFDNLG 781 >gi|159124521|gb|EDP49639.1| ATP citrate lyase, subunit 1, putative [Aspergillus fumigatus A1163] Length = 725 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 116/248 (46%), Gaps = 16/248 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ VA+A + +V+ + + +E + +I I I EG+ Sbjct: 156 YWGTSETLLPVYQDVAKAMAKHPDVDTVVNFASSRSVYSSTMELMNYPQIKSIAIIAEGV 215 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 216 PERRAREIMVTAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 275 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E SQ G + IGGD GT FID L + AD + ++++GE+GG Sbjct: 276 KSGGMSNELNNIISQTTDGVHEGIAIGGDRYPGTTFIDHLLRYQADPDCKILLLLGEVGG 335 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K+ KP+V + G A +T GHAGA + A K A Sbjct: 336 VEEYRVIEAVKNGTI---TKPLVAWAIGTCASMFKTEVQFGHAGASANSQLETAVYKNKA 392 Query: 275 MKEAGICI 282 M+EAGI + Sbjct: 393 MREAGIHV 400 >gi|67523961|ref|XP_660040.1| ACL1_NEUCR Probable ATP-citrate synthase subunit 1 (ATP-citrate (pro-S-)-lyase 1) (Citrate cleavage enzyme subunit 1) [Aspergillus nidulans FGSC A4] gi|40744986|gb|EAA64142.1| ACL1_NEUCR Probable ATP-citrate synthase subunit 1 (ATP-citrate (pro-S-)-lyase 1) (Citrate cleavage enzyme subunit 1) [Aspergillus nidulans FGSC A4] gi|259487849|tpe|CBF86850.1| TPA: ATP citrate lyase, subunit 1, putative (AFU_orthologue; AFUA_6G10650) [Aspergillus nidulans FGSC A4] Length = 655 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 116/248 (46%), Gaps = 16/248 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ A+A + +V+ + + +E ++ +I I I EG+ Sbjct: 86 YWGTSETLLPVYQDTAKAMAKHPDVDTVVNFASSRSVYSSTMELMQYPQIKCIAIIAEGV 145 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 146 PERRAREILVTAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 205 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E SQ G V IGGD GT FID L + A+ + +V++GE+GG Sbjct: 206 KSGGMSNELNNIISQTTDGVYEGVAIGGDRYPGTTFIDHLLRYQAEPECKILVLLGEVGG 265 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K+ KPIV + G A +T GHAGA + A K A Sbjct: 266 VEEYRVIEAVKNGVI---TKPIVAWAIGTCASMFKTEVQFGHAGASANSDLETAVAKNKA 322 Query: 275 MKEAGICI 282 M+EAGI + Sbjct: 323 MREAGIYV 330 >gi|70992209|ref|XP_750953.1| ATP citrate lyase, subunit 1 [Aspergillus fumigatus Af293] gi|66848586|gb|EAL88915.1| ATP citrate lyase, subunit 1, putative [Aspergillus fumigatus Af293] Length = 724 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 116/248 (46%), Gaps = 16/248 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ VA+A + +V+ + + +E + +I I I EG+ Sbjct: 155 YWGTSETLLPVYQDVAKAMAKHPDVDTVVNFASSRSVYSSTMELMNYPQIKSIAIIAEGV 214 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 215 PERRAREIMVTAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 274 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E SQ G + IGGD GT FID L + AD + ++++GE+GG Sbjct: 275 KSGGMSNELNNIISQTTDGVHEGIAIGGDRYPGTTFIDHLLRYQADPDCKILLLLGEVGG 334 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K+ KP+V + G A +T GHAGA + A K A Sbjct: 335 VEEYRVIEAVKNGTI---TKPLVAWAIGTCASMFKTEVQFGHAGASANSQLETAVYKNKA 391 Query: 275 MKEAGICI 282 M+EAGI + Sbjct: 392 MREAGIHV 399 >gi|297517272|ref|ZP_06935658.1| succinyl-CoA synthetase subunit alpha [Escherichia coli OP50] Length = 84 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/87 (52%), Positives = 63/87 (72%), Gaps = 4/87 (4%) Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 M+GEIGGSAEEEAA ++K+ KP+VG++AG TAP G+ MGHAGA+I+GGKG A++ Sbjct: 1 MIGEIGGSAEEEAAAYIKEHVT----KPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADE 56 Query: 271 KINAMKEAGICIAPSPARIGRSLVELL 297 K A++ AG+ S A IG +L +L Sbjct: 57 KFAALEAAGVKTVRSLADIGEALKTVL 83 >gi|320170052|gb|EFW46951.1| ATP citrate-lyase [Capsaspora owczarzaki ATCC 30864] Length = 1105 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 84/303 (27%), Positives = 136/303 (44%), Gaps = 26/303 (8%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGS----TYWTGGNVNVP 57 L +T+ ++ G+ +A G + + V ++P G YW + VP Sbjct: 493 LFSTSTRSIIFGMQPRAVQGMLDFDHVCRRERPSVAAMVYPFSGDHTQKYYWGSKEILVP 552 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE--AEIPLIVCITEGIPVLDMVRVK 114 + +++A K A+ + + A +E+++ +I I I EGIP + Sbjct: 553 CYQRLSDAIKAHADADVVINFASFRSAYATTLEALQFHKQIRTIAIIAEGIPENRTRDLI 612 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 + + +IGP G + P +IG IM ++R GSV +SRSG ++ E Sbjct: 613 FKGREVGVTVIGPATVGGIKPGCFRIGNTGGMLDNIMTSKLYRAGSVAYVSRSGGMSNEL 672 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 S+ G V IGGD GT FID L + AD + +V++GE+GG+ E + Sbjct: 673 NNIISRTTNGVYEGVAIGGDRYPGTTFIDHLFRYQADPEVKMLVLLGEVGGTEEYD---- 728 Query: 227 LKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 + D K G+ KP+V + G A + GHAGA + A K A+++AG I Sbjct: 729 ICDAIKSGKLTKPLVAWCIGTCASMFTSEVQFGHAGACANADNETAVAKNKALRDAG-AI 787 Query: 283 APS 285 PS Sbjct: 788 VPS 790 >gi|269302772|gb|ACZ32872.1| putative succinyl-CoA ligase [ADP-forming], alpha subunit [Chlamydophila pneumoniae LPCoLN] Length = 95 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/89 (48%), Positives = 63/89 (70%), Gaps = 4/89 (4%) Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 +++GEIGGSAEEEAA +++ KP+V F+AG TAP G+ MGHAGA+ISG G A Sbjct: 6 FLIIGEIGGSAEEEAAAWIQAHCT----KPVVAFIAGVTAPKGKRMGHAGAIISGNSGDA 61 Query: 269 EDKINAMKEAGICIAPSPARIGRSLVELL 297 + KI ++E+G+ + SPA IG+++ +L Sbjct: 62 KSKIQVLRESGVTVVESPAHIGKTVDAVL 90 >gi|312066071|ref|XP_003136095.1| ATP-citrate synthase [Loa loa] gi|307768733|gb|EFO27967.1| ATP-citrate synthase [Loa loa] Length = 1113 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 86/324 (26%), Positives = 142/324 (43%), Gaps = 30/324 (9%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L + +TK +V G KA G + Q VV +P K Y+ + VP Sbjct: 496 LFENHTKAIVWGQQMKAIQGMLDFDFVCGRSQPSVVASTYPFIGDHKQKYYFGHKEILVP 555 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIP--------V 107 V+ ++ +A + + + + + E+++ ++I +I I EGIP + Sbjct: 556 VYKSMKDAFIKHHDVSVFITFASLRSVYATVREALDFSQIRVIAIIAEGIPENQTRQDKL 615 Query: 108 LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRS 159 + + R + LIGP G + P KIG I+ ++R GSV +SRS Sbjct: 616 VLIYRAFQLANEKCVTLIGPATVGGIKPGCFKIGNTGGMIDNILSLKLYRPGSVAYVSRS 675 Query: 160 GTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSA 219 G ++ E SQ G + IGGD G+ F+D L + D+ + +VM+GE+GG Sbjct: 676 GGMSNELNNIISQNADGVYEGIAIGGDRYPGSTFVDHLLRYEMDDRVKMMVMLGELGGEE 735 Query: 220 EEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMK 276 E + + LK+ + KP++ + G A GHAGA + A K A+K Sbjct: 736 EYKVVEALKE---KRLTKPLIAWCIGTCANYVTFEIQFGHAGASANAQAETATAKNLALK 792 Query: 277 EAGICIAPSPARIGRSLVELLGSL 300 EAG + S +G + ++ L Sbjct: 793 EAGAYVPNSFNDLGDEIAKIYKDL 816 >gi|219118523|ref|XP_002180032.1| atp-citrate synthase [Phaeodactylum tricornutum CCAP 1055/1] gi|217408289|gb|EEC48223.1| atp-citrate synthase [Phaeodactylum tricornutum CCAP 1055/1] Length = 1082 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 77/268 (28%), Positives = 120/268 (44%), Gaps = 19/268 (7%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIE--SIEAEIPLIVCITEG 104 YW + +PV+ T+ EA ++ A V+ + +++E + +I I I EG Sbjct: 527 YWGTDEIMMPVYQTMEEAFKKHAEVTVVVNFASFRSVYSSVLEMLNFSEQIKTIAIIAEG 586 Query: 105 IPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGIL 156 +P + +K + +IGP G + P +IG I+ ++R GSV + Sbjct: 587 VPESQTRAINIAAQKLNVGIIGPATVGGIKPGCFRIGNTGGMLDNIVMSKLYRPGSVAYV 646 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIG 216 S+SG L+ E + G V IGGD G+ F+D L + + +V++GE+G Sbjct: 647 SKSGGLSNELNNLICRNSDGVYEGVAIGGDRYPGSRFMDHLLRYNDNPHVHILVLLGEVG 706 Query: 217 GSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKI 272 G E E LK GR KP+V + G A P GHAGA+ G A K Sbjct: 707 GVDEYEICGALKS----GRISKPLVAWCIGTCASIFPFEVQFGHAGALARGDMETARAKN 762 Query: 273 NAMKEAGICIAPSPARIGRSLVELLGSL 300 A+KEAG + + G + E+ L Sbjct: 763 KALKEAGAHVPENFFEFGDVIHEVFEFL 790 >gi|316973647|gb|EFV57211.1| ATP-citrate synthase [Trichinella spiralis] Length = 1157 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 96/328 (29%), Positives = 145/328 (44%), Gaps = 58/328 (17%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ---VVGGIHP----KKGSTYWTGGNVNV 56 L NT+ +V G+ KA + + CQ + VV +P K Y+ + + Sbjct: 489 LFTSNTRAIVWGMQVKAVQSMLDFDYV-CQRKLPSVVAMTYPMTGDHKQKFYFGHKEILI 547 Query: 57 PVFTTVAEAKERTAANASVI--YVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRV 113 PV+ ++A+A E+ +ASV+ + A DA +E+++ ++ I I EGIP ++ Sbjct: 548 PVYKSMAKAIEK-HPDASVLINFASLRSAYDATVEALQFPQVRCIAIIAEGIPENFTRKL 606 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 R E++ +IGP G + P KIG IM ++R GSV +SRSG ++ E Sbjct: 607 ITRAEQAGVTIIGPATVGGIKPGCFKIGNTGGMMDNIMASKLYRPGSVAYVSRSGGMSNE 666 Query: 166 AVFQTSQEGLGQSTAVGIGGD------PVKGTEFIDVLELFLADEATESIVMVGEIGGSA 219 SQ G V IGGD + F D L F D + +VM+GEIGG Sbjct: 667 LNNIISQVTNGVYEGVAIGGDRKIFKIRYPCSTFCDHLLRFEDDPKVKMMVMLGEIGGVE 726 Query: 220 EEEAAQFLKDEAKRGR-KKPIVGFVAGKTAP------------------PGRT------- 253 E + + LK+ G+ KKP+V + G A RT Sbjct: 727 EYKVCELLKN----GKIKKPLVAWCIGTCASFLPSEMVIMNCLNKCRQCKNRTVKVGVGL 782 Query: 254 --MGHAGAVISGGKGGAEDKINAMKEAG 279 GH+GA + K A K A+K+AG Sbjct: 783 VQFGHSGASAAAEKETACSKNRALKDAG 810 >gi|115388095|ref|XP_001211553.1| ATP-citrate synthase subunit 1 [Aspergillus terreus NIH2624] gi|114195637|gb|EAU37337.1| ATP-citrate synthase subunit 1 [Aspergillus terreus NIH2624] Length = 656 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 117/248 (47%), Gaps = 16/248 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ V++A + +V+ + + +E ++ +I I I EG+ Sbjct: 87 YWGTSETLLPVYQDVSKAMAKHPDVDTVVNFASSRSVYSSTMELMQCPQIKAIAIIAEGV 146 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 147 PERRAREIMVTAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 206 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E SQ G + IGGD GT FID L + A+ + +V++GE+GG Sbjct: 207 KSGGMSNELNNIISQTTDGVYEGIAIGGDRYPGTTFIDHLLRYQAEPECKILVLLGEVGG 266 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K+ KP+V + G A +T GHAGA + A K A Sbjct: 267 VEEYRVIEAVKNGTI---TKPVVAWAIGTCASMFKTEVQFGHAGASANSDLETAVAKNKA 323 Query: 275 MKEAGICI 282 M+EAGI + Sbjct: 324 MREAGIHV 331 >gi|296416283|ref|XP_002837810.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633693|emb|CAZ82001.1| unnamed protein product [Tuber melanosporum] Length = 663 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 84/298 (28%), Positives = 131/298 (43%), Gaps = 22/298 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGS----TYWTGGNVNVP 57 L T+ V GL +A G + V I+P G YW +P Sbjct: 42 LFHTKTRAFVYGLQPRACQGMLDFDFICKRKTPSVAAIIYPFGGQFVSKMYWGTSETLLP 101 Query: 58 VFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 V+ +V +A E+ +V+ + + +E +E +I I I EG+P + Sbjct: 102 VYQSVEKACEKHPEVDTVVNFASSRSVYSSTLELMEKPQIKSIAIIAEGVPERRAREIMH 161 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ + ++GP G + P KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 162 IAQQKNITIVGPATVGGIKPGCYKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 221 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G V IGGD GT FID L + D + +V++GE+GG E + + Sbjct: 222 NILAEVTDGVYEGVAIGGDRYPGTTFIDHLLRYELDPECKILVLLGEVGGVEEYRVIEAV 281 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 K+ KPIV + G A +T GHAG+ + A K AMKEAG + Sbjct: 282 KNGTI---TKPIVAWAIGTCASMFKTEVQFGHAGSFANSQLETAASKNAAMKEAGFHV 336 >gi|307181417|gb|EFN69012.1| ATP-citrate synthase [Camponotus floridanus] Length = 819 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 82/277 (29%), Positives = 129/277 (46%), Gaps = 24/277 (8%) Query: 28 AILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDA 86 AI+Y T G H +K YW V +PV+ + +A + A+ V + A ++ Sbjct: 514 AIVYPFT----GDHKQK--FYWGHKEVLIPVYKQMKDAMAKHVDADVMVTFASLRSAYES 567 Query: 87 IIESIE-AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG---- 141 +E+++ +I I I EGIP ++ ++ + +IGP G + P KIG Sbjct: 568 TMETLQFPQIRAIAIIAEGIPENMTRKLILAAQRRNVTIIGPATVGGVKPGCFKIGNTGG 627 Query: 142 ----IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 I+ ++R GSV +SRSG ++ E S+ G V IGGD GT F+D + Sbjct: 628 MMDNILHSKLYRPGSVAYVSRSGGMSNELNNIISKASNGVLEGVAIGGDRYPGTTFMDHI 687 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT--- 253 + + E IV++GE+GG E E + LK G+ KP+V + G A + Sbjct: 688 MRYQNNPEAELIVLLGEVGGIEEYEVCEALKS----GKITKPLVAWCIGTCASMFNSEVQ 743 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 GHAG++ A K A+K AG + S +G Sbjct: 744 FGHAGSIAHSNLETASAKNAALKAAGAYVPDSFDTLG 780 >gi|242216681|ref|XP_002474146.1| predicted protein [Postia placenta Mad-698-R] gi|220726691|gb|EED80632.1| predicted protein [Postia placenta Mad-698-R] Length = 1153 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 34/302 (11%) Query: 6 DKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVNVPVF 59 D T+ V GL +A G + + V I+P G YW +PV+ Sbjct: 539 DGRTRAFVYGLQPRAIQGMLDFDYSCGREAPSVAAMIYPFGGHHIQKFYWGTKETLLPVY 598 Query: 60 TTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIP------VLDMV 111 T+V EA K+ A+ V + + +E A+I I I EG+P +L + Sbjct: 599 TSVEEAVKKHADADVVVNFASSRSVYSSTLEIFNFAQIKSIAIIAEGVPERHAREILHIA 658 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLT 163 + K L +IGP G + P +IG I+ ++R GSVG +S+SG ++ Sbjct: 659 KSKGVL------IIGPATVGGIKPGCFRIGNSGGMMDNIIASKLYRPGSVGYVSKSGGMS 712 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E S G + IGGD G+ FID L + D + +V++GE+GG E Sbjct: 713 NELNNILSLTTNGTYEGIAIGGDRYPGSTFIDHLLRYEQDPECKMLVLLGEVGGIEEYRV 772 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGI 280 + +K K +KPI+ + G A T GHAG++ + A+ K +AM+ AG Sbjct: 773 IEAVK---KGTIRKPIIAWAIGTCAKMFTTEVQFGHAGSMANSDLETADAKNSAMRAAGF 829 Query: 281 CI 282 + Sbjct: 830 VV 831 >gi|154271826|ref|XP_001536766.1| hypothetical protein HCAG_08548 [Ajellomyces capsulatus NAm1] gi|150409436|gb|EDN04886.1| hypothetical protein HCAG_08548 [Ajellomyces capsulatus NAm1] Length = 138 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 48/100 (48%), Positives = 64/100 (64%), Gaps = 5/100 (5%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T VVGG +PKK G PVF T Sbjct: 36 NLRINSDTKVIYQGFTGKQGTFHAQQAIDYG-TNVVGGTNPKKAGQTHLGK----PVFAT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCI 101 V +A + T A AS I+VPP A +I E+IE+E+PL+V Sbjct: 91 VRDAVKETGATASAIFVPPPLAAKSIEEAIESEVPLVVWF 130 >gi|309366645|emb|CAP21104.2| hypothetical protein CBG_24512 [Caenorhabditis briggsae AF16] Length = 1106 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 80/316 (25%), Positives = 142/316 (44%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVNVP 57 L + +TK ++ G KA G + VV +P G Y+ + +P Sbjct: 492 LFETDTKAIIWGQQVKAIQGMLDFDFVCRRDSPSVVASTYPFTGDNKQKFYFGQKEILIP 551 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A+ + + + ++E++E +I +I I EG+P ++ Sbjct: 552 AYKSMAKAFATHPEASIMITFASMRSVFETVLEALEFPQIKVIAIIAEGVPENQTRKLLK 611 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 LIGP G + P + KIG I+ ++R GSV +SRSG ++ E Sbjct: 612 IAHDRGVTLIGPATVGGIKPGAFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 671 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD G+ + D + + D + IV++GE+GG E + + L Sbjct: 672 NIISQNTDGVYEGIAIGGDRYPGSTYTDHIIRYQNDNRVKMIVLLGEVGGVEEYKIVEIL 731 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K ++ KP+V + G A + GHAGA + A K A++ +G + P Sbjct: 732 K---QKKVTKPLVAWCIGTCADHITSEVQFGHAGASANALGETATCKNAALRASGALVPP 788 Query: 285 SPARIGRSLVELLGSL 300 S +G+++ ++ +L Sbjct: 789 SFDDLGKTIRQVYDNL 804 >gi|268569740|ref|XP_002648327.1| Hypothetical protein CBG24512 [Caenorhabditis briggsae] Length = 1112 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 80/316 (25%), Positives = 142/316 (44%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVNVP 57 L + +TK ++ G KA G + VV +P G Y+ + +P Sbjct: 499 LFETDTKAIIWGQQVKAIQGMLDFDFVCRRDSPSVVASTYPFTGDNKQKFYFGQKEILIP 558 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A+ + + + ++E++E +I +I I EG+P ++ Sbjct: 559 AYKSMAKAFATHPEASIMITFASMRSVFETVLEALEFPQIKVIAIIAEGVPENQTRKLLK 618 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 LIGP G + P + KIG I+ ++R GSV +SRSG ++ E Sbjct: 619 IAHDRGVTLIGPATVGGIKPGAFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 678 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD G+ + D + + D + IV++GE+GG E + + L Sbjct: 679 NIISQNTDGVYEGIAIGGDRYPGSTYTDHIIRYQNDNRVKMIVLLGEVGGVEEYKIVEIL 738 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K ++ KP+V + G A + GHAGA + A K A++ +G + P Sbjct: 739 K---QKKVTKPLVAWCIGTCADHITSEVQFGHAGASANALGETATCKNAALRASGALVPP 795 Query: 285 SPARIGRSLVELLGSL 300 S +G+++ ++ +L Sbjct: 796 SFDDLGKTIRQVYDNL 811 >gi|119184194|ref|XP_001243025.1| hypothetical protein CIMG_06921 [Coccidioides immitis RS] Length = 467 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 54/118 (45%), Positives = 78/118 (66%), Gaps = 1/118 (0%) Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPIVG 241 +GGD + GT+F+D L++F D+ T I++VGEIGG+AE +AA+++KD +R KPI+ Sbjct: 1 MGGDVLAGTDFVDALKVFEHDDDTHGIIIVGEIGGTAEMDAAEWIKDYRRRTANPKPIMA 60 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V G AP GR MGHAGA + G+ A+ KI A+++AG I P + G + LLGS Sbjct: 61 LVGGIEAPHGRIMGHAGAWTAPGEPDAQMKIKALQDAGAVIVDHPEKFGEGMKTLLGS 118 >gi|169772625|ref|XP_001820781.1| ATP-citrate synthase subunit 1 [Aspergillus oryzae RIB40] gi|83768642|dbj|BAE58779.1| unnamed protein product [Aspergillus oryzae] Length = 656 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 85/298 (28%), Positives = 130/298 (43%), Gaps = 22/298 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGS----TYWTGGNVNVP 57 L T+ V G+ KA G + V G I+ G YW +P Sbjct: 37 LFHNKTRCFVYGMQPKAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 96 Query: 58 VFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 V+ V++A + +V+ + + +E + +I I I EG+P + Sbjct: 97 VYQDVSKAMAKHPDVDTVVNFASSRSVYSSTMELMNCPQIKSIAIIAEGVPERRAREILV 156 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 157 TAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 216 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + + + +V++GE+GG E + + Sbjct: 217 NIVSQNTDGVYEGVAIGGDRYPGTTFIDHLLRYQNEPECKILVLLGEVGGVEEYRVIEAV 276 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 K+ KPIV + G A +T GHAGA + A K AM+EAGI + Sbjct: 277 KNGTI---TKPIVAWAIGTCASMFKTEVQFGHAGASANSDLETAVAKNKAMREAGIHV 331 >gi|326497339|dbj|BAK02254.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1102 Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 77/271 (28%), Positives = 125/271 (46%), Gaps = 26/271 (9%) Query: 32 CQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIES 90 C G H +K YW + VP++ + EA K+ ++ V + ++ ++ Sbjct: 528 CMVYPFSGNHFQK--FYWNTKEILVPIYQHLDEAIKKNPDVDSVVNFASSRSVYESTLDL 585 Query: 91 IEA-EIPLIVCITEGIP---VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG----- 141 ++ ++ I I EG+P D++R R + +IGP G + P ++G Sbjct: 586 LKHPQLRTIAIIAEGVPERYTRDIIR---RANATGVMIIGPATVGGIKPGCFRVGNTGGM 642 Query: 142 ---IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 I+ ++R GSV ++RSG ++ E S+ G V IGGD G+ FID + Sbjct: 643 LDNILSSKLYRPGSVAYVARSGGMSNELNNIVSRNTDGVYEGVAIGGDMYPGSTFIDHML 702 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG---KTAPPGRTMG 255 + D + IV++GE+GG E + +K +KR KP+V + G K P G Sbjct: 703 RYEQDPDVKMIVLLGEVGGVEEYRVCEAIK--SKR-ITKPVVAWCIGTCAKMFPYEVQFG 759 Query: 256 HAGAVISGGKGGAEDKIN-AMKEAGICIAPS 285 HAGA +G D N A+K AG C+ P Sbjct: 760 HAGACAAGKDITTADAKNRALKLAG-CVVPD 789 >gi|295664925|ref|XP_002793014.1| ATP-citrate synthase subunit 1 [Paracoccidioides brasiliensis Pb01] gi|226278535|gb|EEH34101.1| ATP-citrate synthase subunit 1 [Paracoccidioides brasiliensis Pb01] Length = 659 Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 74/266 (27%), Positives = 121/266 (45%), Gaps = 16/266 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ V +A + +++ + + +E ++ +I I I EG+ Sbjct: 88 YWGTSETLLPVYQEVEKAMTKHPDVDTIVNFASSRSVYSSTMELMQYPQIKSIAIIAEGV 147 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 148 PERRAREIMVAAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 207 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E SQ G V IGGD GT FID L + AD + ++++GE+GG Sbjct: 208 KSGGMSNELNNIISQNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPKCKILLLLGEVGG 267 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E ++D KP+V + G A +T GHAGA + A K Sbjct: 268 VEEYRVIDAVRDGTI---TKPVVAWAIGTCASLFKTEVQFGHAGASANSELETAVMKNKY 324 Query: 275 MKEAGICIAPSPARIGRSLVELLGSL 300 M+E+GI + + + R L ++ L Sbjct: 325 MRESGIHVPDTFEELPRVLADVYKKL 350 >gi|326432316|gb|EGD77886.1| acly protein [Salpingoeca sp. ATCC 50818] Length = 1083 Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 87/322 (27%), Positives = 146/322 (45%), Gaps = 32/322 (9%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVNVP 57 L T+ L G+ +A G + + V G I+P G+ YW V +P Sbjct: 473 LFTNKTRALFFGMQPRACQGMLDFDYCCKREKGSVAGMIYPFSGNHSQKFYWGTKEVLIP 532 Query: 58 VFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ + EA + + + + A D+ + +++ +I +I I EGIP + R+ Sbjct: 533 VYQKMEEAMAKNPDVDVLINFASLRSAYDSTLAALQFPQIKVIAIIAEGIPE-HLTRL-- 589 Query: 116 RLEKSSSR---LIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTY 164 ++++++R +IGP G + P KIG I+ ++R GSV +SRSG ++ Sbjct: 590 LIKEANARGVTIIGPATVGGIKPGCFKIGNTGGMIDNIISAKLYRPGSVAYVSRSGGMSN 649 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E S+ G V IGGD G+ F+D L + D + +V++GE+GG E Sbjct: 650 ELNNIISRNSNGVYEGVAIGGDRYPGSTFMDHLLRYQDDPDAKVLVLLGEVGGIEEYAIC 709 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 + LK KP++ + G A + GHAGA + A K A++EAG Sbjct: 710 EALKSSRI---NKPLIAWCIGTCAKMFSSDVQFGHAGASAHSDRETALAKNKALREAGAL 766 Query: 282 IAPSPARIG----RSLVELLGS 299 + S +G ++ EL+ S Sbjct: 767 VPESFDTLGELIHKTYSELVAS 788 >gi|312212766|emb|CBX92849.1| similar to ATP-citrate synthase subunit 1 [Leptosphaeria maculans] Length = 665 Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 89/301 (29%), Positives = 129/301 (42%), Gaps = 28/301 (9%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGS----TYWTGGNVNVP 57 L T+ V GL +A G + Q V G I+ G YW +P Sbjct: 46 LFHPKTRCFVYGLQPRAVQGMLDFDFICKRKQPSVAGIIYTFGGQFVSKMYWGTSETLLP 105 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE--AEIPLIVCIT---EGIPVLDMVR 112 V+ TV +A A +A V V + ++ +S E P I CI EG+P Sbjct: 106 VYQTVEKA---VAKHADVDTVVNFASSRSVFQSTMELMEFPQIKCIAIIAEGVPERRARE 162 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTY 164 + +K +IGP G + P + KIG I+ ++R GSV +S+SG ++ Sbjct: 163 ILHVAQKKGVTIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRPGSVSYVSKSGGMSN 222 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E + G V IGGD GT FID + + AD + IV++GE+GG E Sbjct: 223 ELNNIIANTTDGVLEGVAIGGDRYPGTTFIDHVLRYQADPDCKCIVLLGEVGGVEEYRVI 282 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 + +K KPIV + G A +T GHAG+ + A K M+EAGI Sbjct: 283 EAVKSGQV---TKPIVAWAIGTVAGMLKTEVQFGHAGSFANSQLETAATKNKTMREAGIY 339 Query: 282 I 282 + Sbjct: 340 V 340 >gi|327293008|ref|XP_003231201.1| ATP-citrate synthase subunit 1 [Trichophyton rubrum CBS 118892] gi|326466620|gb|EGD92073.1| ATP-citrate synthase subunit 1 [Trichophyton rubrum CBS 118892] Length = 650 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 16/248 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIE-AEIPLIVCITEGI 105 YW +PV+ +A + A +V+ + + +E +E +I I I EG+ Sbjct: 80 YWGTSETLLPVYQDTNKAMAKHADVDTVVNFASSRSVYSSTMELMEFPQIKTIAIIAEGV 139 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + R ++ +IGP G + P + KIG I+ ++RKGSV +S Sbjct: 140 PERRAREIMVRAKEKGVTIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVAYVS 199 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E Q G V IGGD GT F+D L + A+ + ++++GE+GG Sbjct: 200 KSGGMSNELNNIVCQTTDGVCEGVAIGGDRYPGTTFLDHLLRYQANPECKILLLLGEVGG 259 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K+ KP+V + G A +T GHAGA + A K + Sbjct: 260 VEEYRVIEAVKNGTI---TKPVVAWAIGTCASMFKTEVQFGHAGASANSDLETAVTKNKS 316 Query: 275 MKEAGICI 282 M+EAGI + Sbjct: 317 MREAGIHV 324 >gi|302655995|ref|XP_003019755.1| hypothetical protein TRV_06178 [Trichophyton verrucosum HKI 0517] gi|291183524|gb|EFE39131.1| hypothetical protein TRV_06178 [Trichophyton verrucosum HKI 0517] Length = 635 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 16/248 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIE-AEIPLIVCITEGI 105 YW +PV+ +A + A +V+ + + +E +E +I I I EG+ Sbjct: 31 YWGTSETLLPVYQDTNKAMAKHADVDTVVNFASSRSVYSSTMELMEFPQIKTIAIIAEGV 90 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + R ++ +IGP G + P + KIG I+ ++RKGSV +S Sbjct: 91 PERRAREIMVRAKEKGVTIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVAYVS 150 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E Q G V IGGD GT F+D L + A+ + ++++GE+GG Sbjct: 151 KSGGMSNELNNIVCQTTDGVCEGVAIGGDRYPGTTFLDHLLRYQANPECKILLLLGEVGG 210 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K+ KP+V + G A +T GHAGA + A K + Sbjct: 211 VEEYRVIEAVKNGTI---TKPVVAWAIGTCASMFKTEVQFGHAGASANSDLETAVTKNKS 267 Query: 275 MKEAGICI 282 M+EAGI + Sbjct: 268 MREAGIHV 275 >gi|326471618|gb|EGD95627.1| ATP-citrate synthase subunit 1 [Trichophyton tonsurans CBS 112818] gi|326484008|gb|EGE08018.1| ATP-citrate synthase subunit 1 [Trichophyton equinum CBS 127.97] Length = 650 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 16/248 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIE-AEIPLIVCITEGI 105 YW +PV+ +A + A +V+ + + +E +E +I I I EG+ Sbjct: 80 YWGTSETLLPVYQDTNKAMAKHADVDTVVNFASSRSVYSSTMELMEFPQIKTIAIIAEGV 139 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + R ++ +IGP G + P + KIG I+ ++RKGSV +S Sbjct: 140 PERRAREIMVRAKEKGVTIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVAYVS 199 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E Q G V IGGD GT F+D L + A+ + ++++GE+GG Sbjct: 200 KSGGMSNELNNIVCQTTDGVCEGVAIGGDRYPGTTFLDHLLRYQANPECKILLLLGEVGG 259 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K+ KP+V + G A +T GHAGA + A K + Sbjct: 260 VEEYRVIEAVKNGTI---TKPVVAWAIGTCASMFKTEVQFGHAGASANSDLETAVTKNKS 316 Query: 275 MKEAGICI 282 M+EAGI + Sbjct: 317 MREAGIHV 324 >gi|156060481|ref|XP_001596163.1| hypothetical protein SS1G_02379 [Sclerotinia sclerotiorum 1980] gi|154699787|gb|EDN99525.1| hypothetical protein SS1G_02379 [Sclerotinia sclerotiorum 1980 UF-70] Length = 655 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 112/248 (45%), Gaps = 16/248 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ V +A + +V+ + + +E +E +I I I EG+ Sbjct: 84 YWGTSETLLPVYQDVGKAMAKHEDVDTVVNFASSRSVYQSTMELLEYPQIKSIAIIAEGV 143 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + K +IGP G + P S KIG I+ ++RKGSVG +S Sbjct: 144 PERRAREILHAAAKKGVTIIGPATVGGIKPGSFKIGNTGGMMDNIVASKLYRKGSVGYVS 203 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E + G V IGGD T FID L + AD + +V++GE+GG Sbjct: 204 KSGGMSNELNNIIANTTDGVYEGVAIGGDRYPSTTFIDHLLRYQADPECKILVLLGEVGG 263 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K+ KPIV + G A +T GHAG+ + A K + Sbjct: 264 VEEYRVIEAVKNGTI---TKPIVAWAIGTCASMFKTEVQFGHAGSFANSQLETAATKNKS 320 Query: 275 MKEAGICI 282 MKEAG + Sbjct: 321 MKEAGFHV 328 >gi|225851244|ref|YP_002731478.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(Citrate cleavage enzyme) [Persephonella marina EX-H1] gi|225646316|gb|ACO04502.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(Citrate cleavage enzyme) [Persephonella marina EX-H1] Length = 616 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 81/304 (26%), Positives = 141/304 (46%), Gaps = 27/304 (8%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ----TQVVGGIHPKKGSTYWTGGN-VNVP 57 +L D+NTK + L A + + + +V +K ++ G + +P Sbjct: 7 LLFDRNTKAIFWNLNRNAIQRMLDYDYVVGRDPSIVAIVAPTQSRKFDKFFYGTQEIMIP 66 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCIT-EGIP--VLDMVRV 113 ++ + EA E A+ + + A D +E+++ + IT EGIP ++R+ Sbjct: 67 IYKSTPEAAEDFPEADVLLNFASFRTAYDVTMEALDIPTIRTIAITAEGIPERFARIMRI 126 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKI--------GIMPGSIFRKGSVGILSRSGTLTYE 165 KA+ + +IGP G + P + +I I+ + R GSVG+++RSG L E Sbjct: 127 KAK--ELGKWIIGPATVGGIAPGAFRIANTGGTIENIVNSKLHRPGSVGLVTRSGGLFNE 184 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 ++ G + + IGGD GT+F+D + F + + +V++GE+GG E A+ Sbjct: 185 LSNVIARNANGIAEGIAIGGDRYPGTDFLDHMLRFEKNPQVKMMVLLGEVGGELEYRVAE 244 Query: 226 FLKDEAKRGR-KKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KD GR KP++ + G K GHAGA + A+ K A++EAG Sbjct: 245 AIKD----GRITKPVIAWCIGTISKYFGGEVQFGHAGAKAGAERETADAKNEALREAGAY 300 Query: 282 IAPS 285 + S Sbjct: 301 VPKS 304 >gi|302498025|ref|XP_003011011.1| hypothetical protein ARB_02743 [Arthroderma benhamiae CBS 112371] gi|291174558|gb|EFE30371.1| hypothetical protein ARB_02743 [Arthroderma benhamiae CBS 112371] Length = 601 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 16/248 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIE-AEIPLIVCITEGI 105 YW +PV+ +A + A +V+ + + +E +E +I I I EG+ Sbjct: 31 YWGTSETLLPVYQDTNKAMAKHADVDTVVNFASSRSVYSSTMELMEFPQIKTIAIIAEGV 90 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + R ++ +IGP G + P + KIG I+ ++RKGSV +S Sbjct: 91 PERRAREIMVRAKEKGVTIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVAYVS 150 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E Q G V IGGD GT F+D L + A+ + ++++GE+GG Sbjct: 151 KSGGMSNELNNIVCQTTDGVCEGVAIGGDRYPGTTFLDHLLRYQANPECKILLLLGEVGG 210 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K+ KP+V + G A +T GHAGA + A K + Sbjct: 211 VEEYRVIEAVKNGTI---TKPVVAWAIGTCASMFKTEVQFGHAGASANSDLETAVTKNKS 267 Query: 275 MKEAGICI 282 M+EAGI + Sbjct: 268 MREAGIHV 275 >gi|5304837|emb|CAB46077.1| ATP citrate lyase [Cyanophora paradoxa] Length = 641 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/271 (31%), Positives = 129/271 (47%), Gaps = 24/271 (8%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA-EIP---LIVCITE 103 ++ + VPV+ + +A R NA V ++ + A S+EA EIP ++V I E Sbjct: 59 FFGTKEIAVPVYASTQDAV-RAHPNADV-FINFASFRSAYQSSLEALEIPSIRVVVIIAE 116 Query: 104 GIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI--------FRKGSVGI 155 G+P D+ ++ A +K LIGP G + + KIG G++ R GSVG Sbjct: 117 GVPEADVKKLIAVSKKKGKILIGPATVGGVQAGAFKIGDTAGTVDNIISCKLHRPGSVGF 176 Query: 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEI 215 +S+SG L+ E S+ G + + GD GT D + F + IV++GE+ Sbjct: 177 VSKSGGLSNECYNILSRTTDGLFEGIAVRGDAFPGTTLADHVIRFQHIPQVKMIVVLGEL 236 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKI 272 GG+ E E + +K K KPI +V+G K P GHAGA G AE K Sbjct: 237 GGTDEYEIVEAMK---KGVITKPICAWVSGTCAKVFPSEVQFGHAGAKSGGMAESAEAKN 293 Query: 273 NAMKEAGICIAPS----PARIGRSLVELLGS 299 A+++AG + S P IG+ +L+ S Sbjct: 294 QALRDAGAHVPTSFEELPDTIGKVYKDLVNS 324 >gi|302915627|ref|XP_003051624.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256732563|gb|EEU45911.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 653 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 86/299 (28%), Positives = 129/299 (43%), Gaps = 24/299 (8%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGS----TYWTGGNVNVP 57 L T+ V GL +A G + + V G I+ G YW +P Sbjct: 33 LFTGKTRCFVYGLQPRAVQGMLDFDFICKRAKPSVAGIIYTFGGQFVSKMYWGTSETLLP 92 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E +E +I I I EG+P + Sbjct: 93 VYQQVEKAVSKHPDVDVVVNFASSRSVYSSTMELMEFPQIKTIAIIAEGVPERRAREIAH 152 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P S KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 153 VAKKKGVTIIGPATVGGIKPGSFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 212 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + G + IGGD GT FID L + AD + +V++GE+GG E + Sbjct: 213 NIIAGNTDGVYEGIAIGGDRYPGTTFIDHLLRYQADPECKILVLLGEVGGVEEYKVI--- 269 Query: 228 KDEAKRG-RKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 D K+G KPIV + G A +T GHAG+ + A K M+EAG + Sbjct: 270 -DAVKQGIITKPIVAWAIGTCASMFKTEVQFGHAGSFANSQLETAAMKNEKMREAGFYV 327 >gi|308500690|ref|XP_003112530.1| hypothetical protein CRE_30753 [Caenorhabditis remanei] gi|308267098|gb|EFP11051.1| hypothetical protein CRE_30753 [Caenorhabditis remanei] Length = 1099 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVNVP 57 L + +TK ++ G KA G + VV +P G Y + +P Sbjct: 488 LFENDTKAVIWGQQHKAIQGMLDFDYVCRRHSPSVVASTYPFTGDNKQKFYCGQKEILIP 547 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A V + + ++E+++ +I +I I EG+P ++ Sbjct: 548 AYKSMAKAFASHPDATVMVTFASMRSVFETVLEALQFPQIKVIAIIAEGVPENQTRKLLK 607 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 E LIGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 608 VAEDKGVTLIGPATVGGIKPGCFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 667 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD G+ + D + + D+ + IV++GE+GG E + L Sbjct: 668 NIISQNTNGVYEGIAIGGDRYPGSTYTDHVLRYQHDDRVKMIVLLGEVGGVEEYRIVELL 727 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K AK+ KP++ + G A + GHAGA +G A K A++ AG + Sbjct: 728 K--AKK-ITKPLIAWCIGTCADHITSEVQFGHAGASANGQGETAACKNTALRVAGALVPD 784 Query: 285 SPARIGRSLVELLGSL 300 S +G + + L Sbjct: 785 SFDDLGNKIRQTYEEL 800 >gi|119471597|ref|XP_001258190.1| ATP citrate lyase, subunit 1, putative [Neosartorya fischeri NRRL 181] gi|119406342|gb|EAW16293.1| ATP citrate lyase, subunit 1, putative [Neosartorya fischeri NRRL 181] Length = 657 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 16/248 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ A+A + +V+ + + +E + +I I I EG+ Sbjct: 88 YWGTSETLLPVYQDAAKAMAKHPDVDTVVNFASSRSVYSSTMELMNYPQIKSIAIIAEGV 147 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 148 PERRAREIMVIAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 207 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E SQ G + IGGD GT FID L + AD + ++++GE+GG Sbjct: 208 KSGGMSNELNNIISQTTDGVHEGIAIGGDRYPGTTFIDHLLRYQADPDCKILLLLGEVGG 267 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K+ KP+V + G A +T GHAGA + A K A Sbjct: 268 VEEYRVIEAVKNGTI---TKPLVAWAIGTCASMFKTEVQFGHAGASANSQLETAVYKNKA 324 Query: 275 MKEAGICI 282 M+EAGI + Sbjct: 325 MREAGIHV 332 >gi|242819170|ref|XP_002487262.1| ATP citrate lyase, subunit 1, putative [Talaromyces stipitatus ATCC 10500] gi|218713727|gb|EED13151.1| ATP citrate lyase, subunit 1, putative [Talaromyces stipitatus ATCC 10500] Length = 656 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/266 (27%), Positives = 120/266 (45%), Gaps = 16/266 (6%) Query: 48 YWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGI 105 YW +PV+ V +A + + + V + + +E +E ++ I I EG+ Sbjct: 85 YWGTSETLLPVYQDVEKAFAKHSDVDTVVNFASSRSVYSSTMELMEIPQVRTIAIIAEGV 144 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 145 PERRAREIMVVAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 204 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E Q G V IGGD GT FID L + AD + ++++GE+GG Sbjct: 205 KSGGMSNELNNIICQNADGVHEGVAIGGDRYPGTTFIDHLLRYQADPECKILLLLGEVGG 264 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K+ KPIV + G A +T GHAGA + A +K Sbjct: 265 VEEYRVIEAVKNGTI---TKPIVAWAIGTCASMFKTEVQFGHAGASANSQLETAVEKNKH 321 Query: 275 MKEAGICIAPSPARIGRSLVELLGSL 300 M+ AG + + + + L +L L Sbjct: 322 MRAAGFYVPDTFEELPQVLNDLYKKL 347 >gi|296814082|ref|XP_002847378.1| ATP-citrate synthase subunit 1 [Arthroderma otae CBS 113480] gi|238840403|gb|EEQ30065.1| ATP-citrate synthase subunit 1 [Arthroderma otae CBS 113480] Length = 653 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 16/248 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIE-AEIPLIVCITEGI 105 YW +PV+ +A + A +V+ + + +E +E +I I I EG+ Sbjct: 83 YWGTSETLLPVYQDTDKAMAKHADVDTVVNFASSRSVYSSTMELMEFPQIKTIAIIAEGV 142 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + R ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 143 PERRAREIMVRAKEKGVTIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 202 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E Q G V IGGD GT F+D L + A+ + ++++GE+GG Sbjct: 203 KSGGMSNELNNIVCQTTDGVCEGVAIGGDRYPGTTFLDHLLRYQANPECKILLLLGEVGG 262 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K+ KP+V + G A +T GHAGA + A K + Sbjct: 263 VEEYRVIEAVKNGTI---TKPVVAWAIGTCASMFKTEVQFGHAGASANSDLETAVTKNKS 319 Query: 275 MKEAGICI 282 M+ AGI + Sbjct: 320 MRAAGIHV 327 >gi|308489338|ref|XP_003106862.1| hypothetical protein CRE_17185 [Caenorhabditis remanei] gi|308252750|gb|EFO96702.1| hypothetical protein CRE_17185 [Caenorhabditis remanei] Length = 1112 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 81/316 (25%), Positives = 137/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L + +TK +V G KA G + VV +P K Y+ + +P Sbjct: 492 LFEDDTKAIVWGQQAKAIQGMLDFDYVCRRNSPSVVASTYPFTGDNKQKYYFGQKEILIP 551 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A+ V + + ++E++E +I +I I EG+P ++ Sbjct: 552 AYKSMAKAFATHPEASVMVTFASMRSVFETVLEALEFPQIKVIAIIAEGVPENQTRKLLK 611 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 LIGP G + P + KIG I+ ++R GSV +SRSG ++ E Sbjct: 612 IAHDRGVTLIGPATVGGIKPGAFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 671 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD G+ + D + + D+ + IV++GE+GG E + L Sbjct: 672 NIISQNTNGVYEGIAIGGDRYPGSTYTDHVIRYQNDDRVKMIVLLGEVGGVEEYKIVDLL 731 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K ++ KP+V + G A + GHAGA + A K A++ +G + Sbjct: 732 K---QKKVTKPLVAWCIGTCADHITSEVQFGHAGASANALGETAACKNAALRASGALVPE 788 Query: 285 SPARIGRSLVELLGSL 300 S +G + + L Sbjct: 789 SFDDLGNKIRQTYDEL 804 >gi|322709756|gb|EFZ01331.1| ATP-citrate synthase subunit 1 [Metarhizium anisopliae ARSEF 23] Length = 661 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 82/298 (27%), Positives = 129/298 (43%), Gaps = 22/298 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGS----TYWTGGNVNVP 57 L + T+ V GL +A G + V G I+ G YW +P Sbjct: 40 LFNDKTRCFVYGLQPRAVQGMLDFDFICKRKTPSVAGIIYTFGGQFVSKMYWGTSETLLP 99 Query: 58 VFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 V+ +A + + V + + +E ++ +I I I EG+P + Sbjct: 100 VYQQPDKAMAKHPDVDVVVNFASSRSVYSSTMELMQYPQIKTIAIIAEGVPERRAREIAH 159 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P S KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 160 AAKKKGVTIIGPATVGGIKPGSFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 219 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD GT FID + + AD + +V++GE+GG E + + + Sbjct: 220 NIISQNTDGVYEGIAIGGDRYPGTTFIDHMLRYQADPDCKILVLLGEVGGVEEYKVIEAV 279 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 + KPIV + G A +T GHAG+ + + A K M+EAG + Sbjct: 280 EQGII---TKPIVAWAIGTCASMFKTEVQFGHAGSFANSQRETAATKNKTMREAGFHV 334 >gi|117926912|ref|YP_867529.1| CoA-binding domain-containing protein [Magnetococcus sp. MC-1] gi|117610668|gb|ABK46123.1| CoA-binding domain protein [Magnetococcus sp. MC-1] Length = 916 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 83/288 (28%), Positives = 125/288 (43%), Gaps = 22/288 (7%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHP-KKGSTYWTGGNVNVPVFTTV 62 + K +V V + G T + Y +V G P + GST T ++PV++ V Sbjct: 36 MATKEDRVCVLNILGGESKSVTPISHAYSGGNIVCGTQPGRSGSTLKTPAG-DIPVYSNV 94 Query: 63 AEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPL--IVCITEGIPVLDMVRVKARLEK 119 EA E NA+V+YVPPSG DA+IE++ L +V +TE + V D ++A + Sbjct: 95 LEAVEAGHVFNAAVVYVPPSGVKDAVIEAVRVSPNLKKVVILTEKVAVKDARIIRAYCQM 154 Query: 120 SSSRLIGPNCPGIL-TPDSCKI-----GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 ++G NC G+ + +I G P GSV I S SG T + Sbjct: 155 RGVDVLGANCLGVADAHNKVRIGGALGGANPEESLIPGSVSIFSNSGNFTTTIAVYLATA 214 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G G +T+V G D + D+ T++ V E GG E + Sbjct: 215 GWGTTTSVSSGKDVYIHYAAPEYTYAMHNDDRTKAAVFYVEPGGYYEHDLV--------- 265 Query: 234 GRKKPIVGFVAGK-TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 KKP+V V G+ A R+ GHAGA+ G + M++ G+ Sbjct: 266 -FKKPVVACVVGRWKAKLTRSCGHAGAIAGSGDNALAKEEWFMEKFGV 312 >gi|156374103|ref|XP_001629648.1| predicted protein [Nematostella vectensis] gi|156216653|gb|EDO37585.1| predicted protein [Nematostella vectensis] Length = 1089 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 81/302 (26%), Positives = 134/302 (44%), Gaps = 24/302 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVNVP 57 L + T+ +V G+ +A G + V ++P G+ Y+ + +P Sbjct: 473 LFHEKTRAIVWGMQARAVQGMLDFDYVCERKYPSVAAMVYPFSGNHKQKFYFGHNEIMIP 532 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ + EA + + + + A DA +E+++ +I I I EGIP + Sbjct: 533 VYKDMGEAMNKHPETDVFINFASLRSAYDATLEAMQFPQIRTIAIIAEGIPEAKTRILNK 592 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 593 KAKELGITIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 652 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G + IGGD GT FID + + ++ + IV++GE+GG E E + Sbjct: 653 NIIARTTDGVYEGIAIGGDRYPGTTFIDHVLRYQDNQDIKMIVLLGEVGGRDEYE----I 708 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 D K GR KP+V + G A + GHAGA A K A+K +G + Sbjct: 709 CDAIKSGRVNKPLVAWCIGTCANMFTSEVQFGHAGASAHSNIETAVAKNKALKSSGAHVP 768 Query: 284 PS 285 S Sbjct: 769 DS 770 >gi|212530264|ref|XP_002145289.1| ATP citrate lyase, subunit 1, putative [Penicillium marneffei ATCC 18224] gi|210074687|gb|EEA28774.1| ATP citrate lyase, subunit 1, putative [Penicillium marneffei ATCC 18224] Length = 656 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/266 (27%), Positives = 119/266 (44%), Gaps = 16/266 (6%) Query: 48 YWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ V +A + + + V + + +E +E ++ I I EG+ Sbjct: 85 YWGTSETLLPVYQDVEKAFAKHSDVDTVVNFASSRSVYSSTMELMELPQVRTIAIIAEGV 144 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + ++ +IGP G + P + KIG I+ ++RKGSVG +S Sbjct: 145 PERRAREIMVVAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVS 204 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E Q G V IGGD GT FID L + AD + ++++GE+GG Sbjct: 205 KSGGMSNELNNIVCQNADGVHEGVAIGGDRYPGTTFIDHLLRYQADPDCKILLLLGEVGG 264 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K+ KPIV + G A +T GHAGA + A +K Sbjct: 265 VEEYRVIEAVKNGII---TKPIVAWAIGTCASMFKTEVQFGHAGASANSQLETAVEKNKH 321 Query: 275 MKEAGICIAPSPARIGRSLVELLGSL 300 M+ AG + + + + L L L Sbjct: 322 MRAAGFYVPDTFEELPQVLNNLYKKL 347 >gi|169607547|ref|XP_001797193.1| hypothetical protein SNOG_06832 [Phaeosphaeria nodorum SN15] gi|160701438|gb|EAT85483.2| hypothetical protein SNOG_06832 [Phaeosphaeria nodorum SN15] Length = 656 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 16/248 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIE-AEIPLIVCITEGI 105 YW +PV+ V +A + A +V+ + + +E +E +I I I EG+ Sbjct: 85 YWGTSETLLPVYQDVGKAIAKHADVDTVVNFASSRSVYQSTMELLEFPQIKSIAIIAEGV 144 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + +K +IGP G + P + KIG I+ ++R GSV +S Sbjct: 145 PERRAREILHVAQKKGVTIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRPGSVSYVS 204 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E + G V IGGD GT FID + + AD + IV++GE+GG Sbjct: 205 KSGGMSNELNNIIANTTDGVLEGVAIGGDRYPGTTFIDHVLRYQADPDCKIIVLLGEVGG 264 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K KPIV + G A +T GHAG+ + A K N+ Sbjct: 265 VEEYRVIEAVKSGQV---NKPIVAWAIGTVAGMLKTEVQFGHAGSFANSQLETAVTKNNS 321 Query: 275 MKEAGICI 282 M+EAGI + Sbjct: 322 MREAGIYV 329 >gi|170102777|ref|XP_001882604.1| predicted protein [Laccaria bicolor S238N-H82] gi|164642501|gb|EDR06757.1| predicted protein [Laccaria bicolor S238N-H82] Length = 1157 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 84/297 (28%), Positives = 127/297 (42%), Gaps = 24/297 (8%) Query: 6 DKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVNVPVF 59 D NT+ V GL +A G + + V I+P G YW +PV+ Sbjct: 543 DANTRSFVYGLQPRAIQGMLDFDYSCGRQTPSVAAMIYPFGGHHIQKFYWGTKETLLPVY 602 Query: 60 TTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMVRVKARL 117 T EA + + V + + +E +E E I I I EG+P + + Sbjct: 603 TGFTEAIAKHPDVDVVVNFASSRSVYSSTLECLEFEQIKAIALIAEGVPERHAREILWKA 662 Query: 118 EKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 + ++GP G + P +IG I+ ++R GSVG +S+SG ++ E Sbjct: 663 KGRGVLIVGPATVGGIKPGCFRIGNSGGMMDNIIASKLYRAGSVGYVSKSGGMSNELNNI 722 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 S G + IGGD G+ FID L + D + +V++GE+GG E D Sbjct: 723 LSLVTNGTYEGIAIGGDRYPGSTFIDHLLRYEQDPDCKMLVLLGEVGGIEEYRVI----D 778 Query: 230 EAKRG-RKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 K G KKPIV + G A T GHAG++ + A+ K AM+ AG + Sbjct: 779 AVKAGIIKKPIVAWAIGTCAKMFTTEVQFGHAGSMANSELETADAKNRAMRAAGFVV 835 >gi|328867681|gb|EGG16063.1| ATP citrate synthase [Dictyostelium fasciculatum] Length = 635 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 85/284 (29%), Positives = 127/284 (44%), Gaps = 24/284 (8%) Query: 36 VVGGIHPKKGSTYWTG----GNVNVPVFTTVAEAKERTAANASVI--YVPPSGAGDAIIE 89 V G IHP ++ + +PVF +V EA + NA V + A + ++ Sbjct: 61 VAGLIHPGSDGGFYKAFFGFKELVIPVFNSVKEACQ-ACPNADVFLNFASHRSAFGSSVK 119 Query: 90 SI-EAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI- 147 +I E + IV I EG+P + + + +K+ +IGP G + + KIG G+I Sbjct: 120 AIQEPTLRTIVIIAEGMPENEARSLISMAKKNGKVIIGPATVGGIQAGAFKIGNTAGTID 179 Query: 148 -------FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 +R GSVG +S+SG L+ E S+ G + IGGD G+ D + F Sbjct: 180 NILACKLYRSGSVGFVSKSGGLSNEMYNVLSRTTDGIYEGIAIGGDAFPGSTLTDHVTRF 239 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTA---PPGRTMGH 256 + IV++GE+GG E D KRG KP+ +V+G A P GH Sbjct: 240 EKLPEVKMIVILGELGGWDEYGVV----DALKRGEITKPVCAWVSGTVAKIFPTEVQFGH 295 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 AGA G AE K A+KEAG + S ++ + L Sbjct: 296 AGAKSGGESESAEMKNKALKEAGAIVPQSFEDFSNAISQTYNKL 339 >gi|114055027|gb|ABI50083.1| ATP citrate lyase alpha subunit [Thermovibrio ruber] Length = 546 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 81/301 (26%), Positives = 132/301 (43%), Gaps = 21/301 (6%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQT----QVVGGIHPKKGSTYWTGGN-VNVP 57 IL D+NTK + L A + L ++ +V +K ++ G + +P Sbjct: 7 ILFDRNTKAIFWNLNRNAIQRMLDYDYLVGRSPSIVAIVAPTQNRKFEKFFYGTEEIMIP 66 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCIT-EGIPVLDMVRVKA 115 ++ + EA E A+ V + A D E++ + IT EGIP + A Sbjct: 67 IYRSTTEAAEAHPDADVLVNFASFRTAYDVTREALNLPTIRTIAITAEGIPERLARDMAA 126 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 R + +IGP G + + +IG I+ + R GS G+++RSG L E Sbjct: 127 RAKAEGKWIIGPATVGGIAAGAFRIGNAGGTLENIVKSKLHRPGSCGLVTRSGGLFNELS 186 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G + IGGD G++F+D L F + A + ++M+GE+GG E + L Sbjct: 187 NIIARNADGIVEGIAIGGDRFPGSDFLDHLLRFQKNPAVKYMIMLGEVGGELEYRVVEAL 246 Query: 228 KDEAKRGRKKPIVGFVAGKTAPP---GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 + K KP++ + G A GHAGA + A+ K A+KEAG + Sbjct: 247 E---KGLITKPLIAWCIGTIAKHFGGEVQFGHAGAKAGADRETADAKNRALKEAGAIVPD 303 Query: 285 S 285 S Sbjct: 304 S 304 >gi|258568988|ref|XP_002585238.1| hypothetical protein UREG_05927 [Uncinocarpus reesii 1704] gi|237906684|gb|EEP81085.1| hypothetical protein UREG_05927 [Uncinocarpus reesii 1704] Length = 486 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 53/118 (44%), Positives = 76/118 (64%), Gaps = 1/118 (0%) Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKPIVG 241 +GGD + GT+F+D L++F D+ T I++VGEIGG+AE +AA+++KD A+ KPI+ Sbjct: 1 MGGDVLAGTDFVDALKVFEHDDDTHGIIIVGEIGGAAELDAAEWIKDYHARTANPKPIMA 60 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V G AP GR MGHAGA + G+ A+ KI A++ AG I P + G + LL S Sbjct: 61 LVGGIEAPQGRIMGHAGAWAAPGEADAQTKIKALQNAGAVIVDHPEKFGEGMKILLSS 118 >gi|289807664|ref|ZP_06538293.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 81 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 44/84 (52%), Positives = 60/84 (71%), Gaps = 4/84 (4%) Query: 214 EIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN 273 EIGGSAEEEAA ++KD KP+VG++AG TAP G+ MGHAGA+I+GGKG A++K Sbjct: 1 EIGGSAEEEAAAYIKDHVT----KPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFA 56 Query: 274 AMKEAGICIAPSPARIGRSLVELL 297 A++ AG+ S A IG +L ++ Sbjct: 57 ALEAAGVKTVRSLADIGEALKAII 80 >gi|78776770|ref|YP_393085.1| ATP-dependent citrate lyase alpha subunit [Sulfurimonas denitrificans DSM 1251] gi|78497310|gb|ABB43850.1| ATP-dependent citrate lyase alpha subunit [Sulfurimonas denitrificans DSM 1251] Length = 604 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 75/246 (30%), Positives = 117/246 (47%), Gaps = 18/246 (7%) Query: 54 VNVPVFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMV 111 + +P++ EAK + A+ + + A D +E++E I+ EGIP Sbjct: 60 IMIPLYRNTTEAKSAQPQADVLLNFASFRTAYDVTMEALELGGFTSIMVTAEGIPERLAR 119 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI--------FRKGSVGILSRSGTLT 163 ++ A + + +IGP G + P + KI + G+I R GS G+++RSG L Sbjct: 120 KMNATGREKNVTIIGPATVGAIAPGAFKIANIGGTIENIVQSKLHRAGSCGLVTRSGGLF 179 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E + G + V IGGD G+ FID L A+ + ++++GE+GG+ E + Sbjct: 180 NELSNIIAINADGIAEGVAIGGDRFVGSVFIDNLLRMEANPEVKYMLLLGEVGGTEEYKV 239 Query: 224 AQFLKDEAKRGR-KKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 + K G+ KKPI+ + G K G GHAGA +G AE K AMKE G Sbjct: 240 IE----AVKSGKIKKPIIAWCIGTIAKYYDSGVQFGHAGASANGDMETAEAKNRAMKEVG 295 Query: 280 ICIAPS 285 I + S Sbjct: 296 IHVPAS 301 >gi|332028433|gb|EGI68476.1| ATP-citrate synthase [Acromyrmex echinatior] Length = 1088 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 75/277 (27%), Positives = 125/277 (45%), Gaps = 24/277 (8%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L TK ++ G+ +A + + V ++P K YW V +P Sbjct: 480 LFSNKTKSIIWGMQTRAVQSMLDFDFVCRRSEPSVAAIVYPFTGDHKQKFYWGHKEVLIP 539 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ + +A + A+ V + A ++ +E+++ +I I I EGIP ++ Sbjct: 540 VYKQMKDAMAKHMDADVMVTFASLRSAYESTMETLQFPQIRTIAIIAEGIPENMTRKMIL 599 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 AAQRRNVTIIGPATVGGVKPGCFKIGNTGGMMDNILHSKLYRPGSVAYVSRSGGMSNELN 659 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD GT F+D + + D + IV++GE+GG E E + L Sbjct: 660 NIISKASNGVLEGVAIGGDRYPGTTFMDHIMRYQNDPDVKLIVLLGEVGGIEEYEVCEAL 719 Query: 228 KDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAV 260 K GR KP++ + G A + GHAG++ Sbjct: 720 ----KAGRITKPLIAWCIGTCASMFNSEVQFGHAGSI 752 >gi|17551266|ref|NP_508280.1| hypothetical protein D1005.1 [Caenorhabditis elegans] gi|1703082|sp|P53585|ACLY_CAEEL RecName: Full=Probable ATP-citrate synthase; AltName: Full=ATP-citrate (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme gi|1326262|gb|AAB00585.1| Hypothetical protein D1005.1 [Caenorhabditis elegans] Length = 1106 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 80/317 (25%), Positives = 139/317 (43%), Gaps = 24/317 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L + +TK ++ G KA G + VV +P K Y+ + +P Sbjct: 492 LFEDDTKAIIWGQQAKAIQGMLDFDYVCRRSSPSVVASTYPFTGDNKQKYYFGQKEILIP 551 Query: 58 VFTTVAEAKERTAANASVI--YVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVK 114 + ++A+A T +AS++ + + ++E++E +I +I I EG+P ++ Sbjct: 552 AYKSMAKAFA-THPDASIMVTFASMRSVFETVLEALEFPQIKVIAIIAEGVPENQTRKLL 610 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 L+GP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 611 KIAHDRGVTLVGPATVGGIKPGCFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNEL 670 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 SQ G + IGGD G+ + D + + D+ + IV++GE+GG E + Sbjct: 671 NNIISQNTNGVYEGIAIGGDRYPGSTYTDHVIRYQNDDRVKMIVLLGEVGGVEEYKIVDL 730 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 LK ++ KP+V + G A + GHAGA + A K A++ +G + Sbjct: 731 LK---QKKVTKPLVAWCIGTCADHITSEVQFGHAGASANALGETAACKNAALRASGALVP 787 Query: 284 PSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 788 ESFDDLGNKIRQTYDEL 804 >gi|74096325|ref|NP_001027756.1| ATP citrate-lyase [Ciona intestinalis] gi|9229902|dbj|BAB00624.1| ATP citrate-lyase [Ciona intestinalis] Length = 1101 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 22/275 (8%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 + T+ ++ GL +A G + V ++P K YW + +P Sbjct: 491 MFTNKTRCIIWGLQSRAVQGMMDFDFVCSRKTPSVAAMVYPFSGDHKQKFYWGHKEILIP 550 Query: 58 VFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +++A + + A+ + + A ++ I++++ +I I I EGIP ++ Sbjct: 551 VYKNMSDAMHKHSDADVMISFASLRSAEESTIDTLQYQQIRTIAIIAEGIPEATTKKLNK 610 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 611 LAREKNVSIIGPATVGGIKPGCFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 670 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD GT F+D + + D + IV++GE+GG+ E + + Sbjct: 671 NIISRTTNGVCEGVAIGGDRYPGTTFMDHILRYQNDANVKMIVVLGEVGGTEEYDICDAI 730 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGA 259 K KP++ + G A + GHAGA Sbjct: 731 KSATI---TKPVIAWCIGTCATMFASEVQFGHAGA 762 >gi|307721496|ref|YP_003892636.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfurimonas autotrophica DSM 16294] gi|306979589|gb|ADN09624.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfurimonas autotrophica DSM 16294] Length = 604 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 74/267 (27%), Positives = 125/267 (46%), Gaps = 18/267 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGI 105 +W G + +P++ + EAK + A+ + + A D +E++ I+ EGI Sbjct: 54 FWGGDEIMIPLYKSTPEAKAAQPQADVLLNFASFRTAYDVTMEALNIGGFKTIMITAEGI 113 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI--------FRKGSVGILS 157 P + A + + +IGP G + P + KI + G+I R+GS G+++ Sbjct: 114 PERLARGMNAYARELNVTVIGPATVGAIVPGAFKIANIGGTIENIINSKLHREGSCGLVT 173 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 RSG L E + G + V IGGD G+ FID L + + ++++GE+GG Sbjct: 174 RSGGLFNELSNIIAINADGIAEGVAIGGDRFVGSVFIDNLLRMEKNPDVKYMILLGEVGG 233 Query: 218 SAEEEAAQFLKDEAKRGR-KKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKIN 273 + E + + K G+ KPI+ + G K G GHAGA + + AE K Sbjct: 234 TEEYKVIE----AVKSGKITKPIIAWCIGTIAKYYDSGVQFGHAGASANAERETAEAKNK 289 Query: 274 AMKEAGICIAPSPARIGRSLVELLGSL 300 AM EAGI + + + +++E+ L Sbjct: 290 AMAEAGIHVPATFNDLPATIMEVYDDL 316 >gi|237756014|ref|ZP_04584597.1| ATP-citrate synthase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691830|gb|EEP60855.1| ATP-citrate synthase [Sulfurihydrogenibium yellowstonense SS-5] Length = 616 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 81/301 (26%), Positives = 139/301 (46%), Gaps = 27/301 (8%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGI----HPKKGSTYWTG-GNVNVP 57 +L DKNTK + L A + + ++ + I + ++ G + +P Sbjct: 7 LLFDKNTKAIFWNLNTSAIQRMLDYDYVVGRSPSIAAIVAPTSERSFEKFFYGTKEIIIP 66 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIP---VLDMVR 112 ++ T +A K A+ + + A +E+ E +I IV EGIP DM R Sbjct: 67 IYKTTKDAAKFHPEADVLLNFASFRTAYPVTLEAFEIPQIRTIVITAEGIPERYARDM-R 125 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKI--------GIMPGSIFRKGSVGILSRSGTLTY 164 +KA+ + +IGP G + P + +I I+ + R GSVG+++RSG L Sbjct: 126 IKAK--QLGKWIIGPATVGGIAPGAFRIANTGGTIENIIASKLHRPGSVGLVTRSGGLFN 183 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E ++ G + + IGGD G++F+D + F + + ++++GE+GG AE + Sbjct: 184 ELSNIIARNADGVAEGIAIGGDRFPGSDFLDHMLRFEKNPQVKFMILLGEVGGEAEYKVV 243 Query: 225 QFLKDEAKRGRKKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 + +K+ KP++G+ G K GHAGA + A+ K AMKE GI Sbjct: 244 EAVKNGLI---TKPVIGWCIGTISKFFGGEVQFGHAGAKAGADRETADAKNRAMKEVGIH 300 Query: 282 I 282 + Sbjct: 301 V 301 >gi|152992138|ref|YP_001357859.1| ATP citrate synthase subunit 2 [Sulfurovum sp. NBC37-1] gi|151423999|dbj|BAF71502.1| ATP citrate synthase, subunit 2 [Sulfurovum sp. NBC37-1] Length = 606 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 87/321 (27%), Positives = 144/321 (44%), Gaps = 25/321 (7%) Query: 1 MSILVDKNTKVLV--QGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTY----WTGGNV 54 MS L K+T+ + T + I + V G + P G+ + + + Sbjct: 1 MSRLYTKDTQAIFWNNNKTAIQRMLDYDYTIGRDKPSVAGIVAPTSGNKFEKFFYGPDEI 60 Query: 55 NVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA--EIPLIVCITEGIPVLDMV 111 + ++ + A+A KE+ A+ + + A D +E+IE + I+ EGIP Sbjct: 61 MISLYKSTADAVKEQPQADVLLNFASFRTAYDVTMEAIEMGDQFRSIMITAEGIPERLAR 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI--------FRKGSVGILSRSGTLT 163 ++ + +IGP G + P + KI + G+I R GS G+++RSG L Sbjct: 121 KMNQAARDAGITVIGPATVGAIAPGAFKIANIGGTIENIVNSKLHRAGSCGLVTRSGGLF 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E + G + V IGGD G+ FID L ++ + ++++GE+GG+ E + Sbjct: 181 NELSNIIAINADGIAEGVAIGGDRFVGSVFIDHLLRMESNPDVKYMILLGEVGGTEEYKV 240 Query: 224 AQFLKDEAKRGR-KKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 + +KD GR KKPI+ + G K G GHAGA + A K AM EAG Sbjct: 241 IEAVKD----GRIKKPIIAWCIGTIAKHFSSGVQFGHAGASANADAETAAAKNKAMAEAG 296 Query: 280 ICIAPSPARIGRSLVELLGSL 300 I + S + ++ E+ L Sbjct: 297 IHVPESFNDLPATIAEVYNDL 317 >gi|321258632|ref|XP_003194037.1| ATP-citrate synthase subunit 1 (ATP-citrate (pro-S-)-lyase 1) [Cryptococcus gattii WM276] gi|317460507|gb|ADV22250.1| ATP-citrate synthase subunit 1 (ATP-citrate (pro-S-)-lyase 1), putative [Cryptococcus gattii WM276] Length = 1150 Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 84/296 (28%), Positives = 131/296 (44%), Gaps = 22/296 (7%) Query: 6 DKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVNVPVF 59 D++T+ V GL +A G + + V I+P G YW +PV+ Sbjct: 537 DEHTRSFVFGLQPRAIQGMLDFDFSCGRKVPSVAAMIYPFGGHHIQKFYWGTKETLLPVY 596 Query: 60 TTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARL 117 T+V EA K+ + V + + +E + +I I I EG+P + Sbjct: 597 TSVGEAIKKHPDVDVVVNFASSRSVYASTLEILSFPQIKAIGIIAEGVPERHARELLHLA 656 Query: 118 EKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 K +IGP G + P +IG ++ ++R GSVG +S+SG ++ E Sbjct: 657 LKKEVIIIGPATVGGIKPGCFRIGNTGGMMDNLIACKLYRPGSVGYVSKSGGMSNELNNI 716 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 S G V IGGD GT FID L + AD + ++++GE+GG+ E + +K Sbjct: 717 LSYTTNGVYEGVAIGGDRYPGTSFIDHLLRYEADPECKMLLLLGEVGGTEEYRVIEAVK- 775 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 K KKPIV + G A + GHAG++ + A+ K AM AG + Sbjct: 776 --KGIIKKPIVAWAIGTCAKMFTSEVQFGHAGSMANSDMETADAKNRAMMAAGFIV 829 >gi|170583706|ref|XP_001896703.1| ATP-citrate synthase [Brugia malayi] gi|158596034|gb|EDP34450.1| ATP-citrate synthase, putative [Brugia malayi] Length = 628 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 87/314 (27%), Positives = 136/314 (43%), Gaps = 37/314 (11%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L + +TK +V G KA G + Q VV +P K Y+ + VP Sbjct: 98 LFESDTKAIVWGQQVKAIQGMLDFDFVCGRSQPSVVASTYPFTGDHKQKYYFGQKEILVP 157 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 V+ ++ +A + + I A + S+ V + E LD +++ Sbjct: 158 VYKSMKDAFNKHHDVSVFITF-------ASLRSV------YVTVREA---LDFAQIRLAN 201 Query: 118 EKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 EK + LIGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 202 EKGVT-LIGPATVGGIKPGCFKIGNTGGMMDNILSLKLYRPGSVAYVSRSGGMSNELNNI 260 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 SQ G + IGGD G+ F+D L + D+ + +VM+GE+GG E + + LK+ Sbjct: 261 ISQNADGVYEGIAIGGDKYPGSTFVDHLLRYEMDDRVKMMVMLGELGGVEEYKVVEALKE 320 Query: 230 EAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 + KP+V + G A GHAGA + A K A+KEAG + S Sbjct: 321 ---KRLTKPLVAWCIGTCADYVTFEIQFGHAGASANAKAETATAKNLALKEAGAHVPNSF 377 Query: 287 ARIGRSLVELLGSL 300 +G + ++ L Sbjct: 378 DDLGDEIAKIYKEL 391 >gi|221486273|gb|EEE24534.1| ATP-citrate synthase, putative [Toxoplasma gondii GT1] Length = 1281 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 78/264 (29%), Positives = 121/264 (45%), Gaps = 21/264 (7%) Query: 46 STYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE----IPLIVCI 101 S Y+ V +PV+ T+ EA + + SV+ S A + + E + IV I Sbjct: 714 SFYFGTEEVLLPVYQTLQEAVQHFP-DVSVLINFASMRSAASVTRLALETAPQLRTIVVI 772 Query: 102 TEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSV 153 EG+P + ++ A LIGP G + + +IG +M ++R GSV Sbjct: 773 AEGVPEREARQLAAETRARGVCLIGPATVGGIKSGAFRIGNTGGTLENVMNARLYRPGSV 832 Query: 154 GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVG 213 G +++SG + E S G A+ IGGD GT +D L F + + +V++G Sbjct: 833 GCVTKSGGMLNEMNNILSIVSDGTYEAIAIGGDRFPGTSMLDHLLRFERNPDIKLLVLLG 892 Query: 214 EIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAE 269 E+GG E E + +KD GR KP++ + G A T GHAGA + A Sbjct: 893 EVGGGMEYEVVEAIKD----GRLTKPLIAWCVGTCASLFSTEVSFGHAGAWAGSNREHAV 948 Query: 270 DKINAMKEAGICIAPSPARIGRSL 293 K A+K AG + S +G+S+ Sbjct: 949 AKNAALKAAGAFVPSSFDELGKSI 972 >gi|221508061|gb|EEE33648.1| ATP-citrate synthase, putative [Toxoplasma gondii VEG] Length = 1281 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 78/264 (29%), Positives = 121/264 (45%), Gaps = 21/264 (7%) Query: 46 STYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE----IPLIVCI 101 S Y+ V +PV+ T+ EA + + SV+ S A + + E + IV I Sbjct: 714 SFYFGTEEVLLPVYQTLQEAVQHFP-DVSVLINFASMRSAASVTRLALETAPQLRTIVVI 772 Query: 102 TEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSV 153 EG+P + ++ A LIGP G + + +IG +M ++R GSV Sbjct: 773 AEGVPEREARQLAAETRARGVCLIGPATVGGIKSGAFRIGNTGGTLENVMNARLYRPGSV 832 Query: 154 GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVG 213 G +++SG + E S G A+ IGGD GT +D L F + + +V++G Sbjct: 833 GCVTKSGGMLNEMNNILSIVSDGTYEAIAIGGDRFPGTSMLDHLLRFERNPDIKLLVLLG 892 Query: 214 EIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAE 269 E+GG E E + +KD GR KP++ + G A T GHAGA + A Sbjct: 893 EVGGGMEYEVVEAIKD----GRLTKPLIAWCVGTCASLFSTEVSFGHAGAWAGSNREHAV 948 Query: 270 DKINAMKEAGICIAPSPARIGRSL 293 K A+K AG + S +G+S+ Sbjct: 949 AKNAALKAAGAFVPSSFDELGKSI 972 >gi|237833545|ref|XP_002366070.1| ATP-citrate synthase, putative [Toxoplasma gondii ME49] gi|211963734|gb|EEA98929.1| ATP-citrate synthase, putative [Toxoplasma gondii ME49] Length = 1281 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 78/264 (29%), Positives = 121/264 (45%), Gaps = 21/264 (7%) Query: 46 STYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE----IPLIVCI 101 S Y+ V +PV+ T+ EA + + SV+ S A + + E + IV I Sbjct: 714 SFYFGTEEVLLPVYQTLQEAVQHFP-DVSVLINFASMRSAASVTRLALETAPQLRTIVVI 772 Query: 102 TEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSV 153 EG+P + ++ A LIGP G + + +IG +M ++R GSV Sbjct: 773 AEGVPEREARQLAAETRARGVCLIGPATVGGIKSGAFRIGNTGGTLENVMNARLYRPGSV 832 Query: 154 GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVG 213 G +++SG + E S G A+ IGGD GT +D L F + + +V++G Sbjct: 833 GCVTKSGGMLNEMNNILSIVSDGTYEAIAIGGDRFPGTSMLDHLLRFERNPDIKLLVLLG 892 Query: 214 EIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAE 269 E+GG E E + +KD GR KP++ + G A T GHAGA + A Sbjct: 893 EVGGGMEYEVVEAIKD----GRLTKPLIAWCVGTCASLFSTEVSFGHAGAWAGSNREHAV 948 Query: 270 DKINAMKEAGICIAPSPARIGRSL 293 K A+K AG + S +G+S+ Sbjct: 949 AKNAALKAAGAFVPSSFDELGKSI 972 >gi|154311911|ref|XP_001555284.1| ATP-citrate synthase subunit 1 [Botryotinia fuckeliana B05.10] gi|150850639|gb|EDN25832.1| ATP-citrate synthase subunit 1 [Botryotinia fuckeliana B05.10] Length = 530 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 112/248 (45%), Gaps = 16/248 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA-EIPLIVCITEGI 105 YW +PV+ V +A + +V+ + + +E ++ +I I I EG+ Sbjct: 85 YWGTSETLLPVYQDVEKAMAKHEDVDTVVNFASSRSVYQSTMELLQYPQIKSIAIIAEGV 144 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + K +IGP G + P S KIG I+ ++RKGSVG +S Sbjct: 145 PERRAREILHAAAKKGVTIIGPATVGGIKPGSFKIGNTGGMMDNIVASKLYRKGSVGYVS 204 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E + G V IGGD T FID L + AD + +V++GE+GG Sbjct: 205 KSGGMSNELNNIIANTTDGVYEGVAIGGDRYPSTTFIDHLLRYQADPECKILVLLGEVGG 264 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K+ KPIV + G A +T GHAG+ + A K + Sbjct: 265 VEEYRVIEAVKNGTI---TKPIVAWAIGTCASMFKTEVQFGHAGSFANSQLETAATKNKS 321 Query: 275 MKEAGICI 282 M++AG + Sbjct: 322 MRDAGFHV 329 >gi|154721400|gb|ABS84822.1| ATP citrate lyase [Toxoplasma gondii] Length = 1281 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 78/264 (29%), Positives = 121/264 (45%), Gaps = 21/264 (7%) Query: 46 STYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE----IPLIVCI 101 S Y+ V +PV+ T+ EA + + SV+ S A + + E + IV I Sbjct: 714 SFYFGTEEVLLPVYQTLQEAVQHFP-DVSVLINFASMRSAASVTRLALETAPQLRTIVVI 772 Query: 102 TEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSV 153 EG+P + ++ A LIGP G + + +IG +M ++R GSV Sbjct: 773 AEGVPEREARQLAAETRARGVCLIGPATVGGIKSGAFRIGNTGGTLENVMNARLYRPGSV 832 Query: 154 GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVG 213 G +++SG + E S G A+ IGGD GT +D L F + + +V++G Sbjct: 833 GCVTKSGGMLNEMNNILSIVSDGTYEAIAIGGDRFPGTSMLDHLLRFERNPDIKLLVLLG 892 Query: 214 EIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAE 269 E+GG E E + +KD GR KP++ + G A T GHAGA + A Sbjct: 893 EVGGGMEYEVVEAIKD----GRLTKPLIAWCVGTCASLFSTEVSFGHAGAWAGSNREHAV 948 Query: 270 DKINAMKEAGICIAPSPARIGRSL 293 K A+K AG + S +G+S+ Sbjct: 949 AKNAALKAAGAFVPSSFDELGKSI 972 >gi|5304835|emb|CAB46076.1| ATP citrate lyase [Cyanophora paradoxa] Length = 524 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 85/271 (31%), Positives = 129/271 (47%), Gaps = 27/271 (9%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA-EIP---LIVCITE 103 ++ + VPV+ + +A R NA V ++ + A S+EA EIP ++V I E Sbjct: 59 FFGTKEIAVPVYASTQDAV-RAHPNADV-FINFASFRSAYQSSLEALEIPSIRVVVIIAE 116 Query: 104 GIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI--------FRKGSVGI 155 G+P D+ ++ A +K +IGP G + + KIG G++ R GSVG Sbjct: 117 GVPEGDVKKLIAVSKKKGKIIIGPATVGGVQAGAFKIGDTAGTVDNIISCKLHRPGSVGF 176 Query: 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEI 215 +S+SG L+ E S+ G + +GGD GT D + F + IV++GE+ Sbjct: 177 VSKSGGLSNECYNILSRTTDGLFEGIAVGGDAFPGTTLADHVIRF---QHIPQIVVLGEL 233 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKI 272 GG+ E E + +K K KPI V+G K P GHAGA G AE K Sbjct: 234 GGTDEYEIVEAMK---KGVITKPICAGVSGTCAKVFPSEVQFGHAGAKSGGMAESAEAKN 290 Query: 273 NAMKEAGICIAPS----PARIGRSLVELLGS 299 A+++AG + S P IG+ +L+ S Sbjct: 291 QALRDAGAHVPTSFEELPDTIGKVYKDLVNS 321 >gi|319789996|ref|YP_004151629.1| ATP-citrate lyase/succinyl-CoA ligase [Thermovibrio ammonificans HB-1] gi|317114498|gb|ADU96988.1| ATP-citrate lyase/succinyl-CoA ligase [Thermovibrio ammonificans HB-1] Length = 616 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 79/301 (26%), Positives = 133/301 (44%), Gaps = 21/301 (6%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQT----QVVGGIHPKKGSTYWTGGN-VNVP 57 +L D++TK + L A + L ++ +V +K ++ G + +P Sbjct: 7 LLFDRDTKAIFWNLNRNAIQRMLDYDYLVGRSPSIVAIVAPTQSRKFDKFFYGTEEIMIP 66 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCIT-EGIPVLDMVRVKA 115 ++ + EA E A+ V + A D E++ + IT EGIP + A Sbjct: 67 IYRSTTEAAEAHPEADVLVNFASFRTAYDVAREALNIPTIRTIAITAEGIPERLARDMAA 126 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 R ++ +IGP G + + +IG I+ + R GS G+++RSG L E Sbjct: 127 RAKQEGKWIIGPATVGGIAAGAFRIGNAGGTLENIVKSKLHRPGSCGLVTRSGGLFNELS 186 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G + IGGD G++F+D L F + A + +VM+GE+GG E + L Sbjct: 187 NIIARNADGIVEGIAIGGDRFPGSDFLDHLLRFQKNPAVKYMVMLGEVGGELEYMVVEAL 246 Query: 228 KDEAKRGRKKPIVGFVAGKTAPP---GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 + K KP++ + G A GHAGA + A+ K A++EAG + Sbjct: 247 E---KGLITKPLIAWCIGTIAKHFGGEVQFGHAGAKAGADRETADAKNRALREAGALVPE 303 Query: 285 S 285 S Sbjct: 304 S 304 >gi|1653989|emb|CAA70288.1| succinyl coenzyme A synthetase alpha subunit [Drosophila melanogaster] Length = 110 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/85 (50%), Positives = 61/85 (71%), Gaps = 5/85 (5%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLNGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDA 86 VAEAK+ T +A+VIYVPP GA A Sbjct: 86 VAEAKKATDPHATVIYVPPPGAAAA 110 >gi|325295316|ref|YP_004281830.1| ATP citrate synthase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065764|gb|ADY73771.1| ATP citrate synthase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 616 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 79/305 (25%), Positives = 135/305 (44%), Gaps = 29/305 (9%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQT--------QVVGGIHPKKGSTYWTGGN- 53 +L D+NTK + L A ++ + Y T +V +K ++ G Sbjct: 7 VLFDRNTKAIFWNLNRNA----IQRMLDYDYTVGRTPSIVAIVAPTQNRKFEKFFFGTQE 62 Query: 54 VNVPVFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCIT-EGIPVLDMV 111 + +P++ + EA E+ A+ V + A + IE++ V IT EGIP Sbjct: 63 IMIPIYKSTVEAAEKHPEADVLVNFASFRTAYNVTIEALNIPTIRTVAITAEGIPERLAR 122 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLT 163 + + ++ +IGP G + + +IG I+ + R GS G+++RSG L Sbjct: 123 DMAYKAKQLGKWIIGPATVGGIAAGAFRIGNAGGTIENIVKSKLHRPGSCGLVTRSGGLF 182 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E ++ G + IGGD G++F+D L F + + ++M+GE+GG E + Sbjct: 183 NELSNIIARNADGIVEGIAIGGDRFPGSDFLDHLIRFQKNPQVKYMIMLGEVGGELEYKV 242 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPP---GRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 A+ +K KP++ + G A GHAGA + A+ K A+KEAG Sbjct: 243 AEAIKSGLI---TKPVIAWCIGTIAKHFGGEVQFGHAGAKAGADRETADAKNRALKEAGA 299 Query: 281 CIAPS 285 + S Sbjct: 300 IVPDS 304 >gi|292619409|ref|XP_001334195.3| PREDICTED: hypothetical protein LOC794259 [Danio rerio] Length = 2571 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 88/309 (28%), Positives = 138/309 (44%), Gaps = 24/309 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVN 55 + L + TKV+V G+ +A G + + VV ++P G YW + Sbjct: 1960 TTLFSRQTKVIVCGIQTQAVQGMLDFDYVCSRDEPSVVAMVYPYTGDHKQKFYWGHKEIL 2019 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIP-VLDMVR 112 + V+ +A+A K+ + + + A D+ +E+++ +I I I EGIP L Sbjct: 2020 LSVYKNMADAMKKHPDVDVLINFASLRSAFDSTMETLQYPQIRTIAIIAEGIPEALTRKL 2079 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTY 164 +K EK + +IGP G + P KIG I+ ++R GSV +S SG ++ Sbjct: 2080 IKTADEKGVT-IIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSSSGGMSN 2138 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E S G V IGGD G+ F+D + + + IV++GEIGG+ E Sbjct: 2139 ELNNIISHTTDGVYEGVAIGGDRFPGSTFMDHVLRYQDTPGIKMIVVLGEIGGTEEYNIC 2198 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 Q + D KPIV + G A + GHAGA + A K A++EAG Sbjct: 2199 QGITDGLI---TKPIVCWCIGTCATLLSSEVQFGHAGACATQVLETAVAKNQALREAGAF 2255 Query: 282 IAPSPARIG 290 + S +G Sbjct: 2256 VPNSFDELG 2264 >gi|78221529|ref|YP_383276.1| CoA-binding protein [Geobacter metallireducens GS-15] gi|78192784|gb|ABB30551.1| CoA-binding protein [Geobacter metallireducens GS-15] Length = 909 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 13/280 (4%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGI-HPKKGSTYWTGGNVNVPVFTTV 62 L +K+++V + + G + T + Y VV G+ + + G T+ T ++PVF ++ Sbjct: 20 LANKHSRVCIMNIRGTESSLVTPVSHAYSGGNVVAGVQYGESGGTFETPVG-DIPVFGSI 78 Query: 63 AEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPL--IVCITEGIPVLDMVRVKARLEK 119 ++ + + V+Y+PPS A+ E + L IV +TE + D ++ + Sbjct: 79 SDVIRAGIHFDTGVVYLPPSAVSHAVSEMCARNVNLKRIVIVTEKVSARDSRLIRYGCQN 138 Query: 120 SSSRLIGPNCPGILTP-DSCKIG-----IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +IG N GI D +IG +P RKGSV I S SG + Sbjct: 139 AKVDVIGANTLGIANSWDQVRIGGALGGDVPAQSLRKGSVAIYSNSGNFSTTISEYLKTA 198 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G G ST + G D + L D T++IV+ E GG E++A ++ E + Sbjct: 199 GFGTSTILSSGKDVYIHFALAEFLYCAENDPRTKAIVVYVEPGGYYEKQALDWIS-EGRF 257 Query: 234 GRKKPIVGFVAGKTAPP-GRTMGHAGAVISGGKGGAEDKI 272 KPI+ V G+ R+ GHAGA+ G +I Sbjct: 258 KLTKPIIACVTGRWKKNLTRSCGHAGAMAGSGDDAEAKEI 297 >gi|114054991|gb|ABI50078.1| ATP citrate lyase alpha subunit [Desulfurobacterium crinifex] Length = 540 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 82/304 (26%), Positives = 134/304 (44%), Gaps = 27/304 (8%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQT----QVVGGIHPKKGSTYWTGGN-VNVP 57 +L D+NTK + L A + +T +V +K ++ G + +P Sbjct: 7 VLFDRNTKAIFWNLNRNAIQRMLDSDYTVGRTPSIVAIVAPTQNRKFEKFFFGTQEIMIP 66 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCIT-EGIP---VLDMVR 112 ++ + EA E+ A+ V + A + IE++ V IT EGIP DM Sbjct: 67 IYKSTVEAAEKHPEADVLVNFASFRTAYNVTIEALNIPTIRTVAITAEGIPERLARDMAH 126 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTY 164 +L K +IGP G + + +IG I+ + R GS G+++RSG L Sbjct: 127 KAKQLGKW---IIGPATVGGIAAGAFRIGNAGGTIENIVKSKLHRPGSCGLVTRSGGLFN 183 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E ++ G + IGGD G++F+D L F + + ++M+GE+GG E + A Sbjct: 184 ELSNIIARNADGIVEGIAIGGDRFPGSDFLDHLIRFQKNPQVKYMIMLGEVGGELEYKVA 243 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTAPP---GRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 + +K KP++ + G A GHAGA + A+ K A+KEAG Sbjct: 244 EAIKSGPI---TKPVIAWCIGTIAKHFGGEVQFGHAGAKAGADRETADAKNRALKEAGAI 300 Query: 282 IAPS 285 + S Sbjct: 301 VPDS 304 >gi|189189554|ref|XP_001931116.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) [Pyrenophora tritici-repentis Pt-1C-BFP] gi|330938223|ref|XP_003305706.1| hypothetical protein PTT_18621 [Pyrenophora teres f. teres 0-1] gi|187972722|gb|EDU40221.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) [Pyrenophora tritici-repentis Pt-1C-BFP] gi|311317132|gb|EFQ86173.1| hypothetical protein PTT_18621 [Pyrenophora teres f. teres 0-1] Length = 658 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 118/266 (44%), Gaps = 16/266 (6%) Query: 48 YWTGGNVNVPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGI 105 YW +PV+ TV +A + + V + + +E +E +I I I EG+ Sbjct: 87 YWGTSETLLPVYQTVEKAVGKHNDVDTVVNFASSRSVYQSTMELMEFPQIKCIAIIAEGV 146 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P + +K +IGP G + P + KIG I+ ++R GS+ +S Sbjct: 147 PERRAREILHVAQKKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRPGSISYVS 206 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E + G V IGGD GT FID + + +D + IV++GE+GG Sbjct: 207 KSGGMSNELNNIIANTTDGVLEGVAIGGDRYPGTTFIDHVLRYQSDPDCKIIVLLGEVGG 266 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K KPIV + G A +T GHAG+ + A K Sbjct: 267 VEEYRVIEAVKSGQV---TKPIVAWAIGTVAGMLKTEVQFGHAGSFANSQLETAATKNKT 323 Query: 275 MKEAGICIAPSPARIGRSLVELLGSL 300 M+EAGI + + + +L ++ L Sbjct: 324 MREAGIYVPETFEEMPETLAQVYQKL 349 >gi|330796396|ref|XP_003286253.1| hypothetical protein DICPUDRAFT_91676 [Dictyostelium purpureum] gi|325083758|gb|EGC37202.1| hypothetical protein DICPUDRAFT_91676 [Dictyostelium purpureum] Length = 621 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 123/269 (45%), Gaps = 24/269 (8%) Query: 36 VVGGIHPKKG----STYWTGGNVNVPVFTTVAEAKERTAANASVIY---VPPSGAGDAII 88 V G IHP ++ + +PV+ +V+EA ++ NA V S +++ Sbjct: 45 VAGLIHPGSDGGLYKAFFGFKELVIPVYNSVSEACQQ-CPNADVFLNFASHRSAYQSSLL 103 Query: 89 ESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG------- 141 E I +V I EG+P + + A +K+ +IGP G + S KIG Sbjct: 104 ALREPSIRTVVIIAEGVPENEARSLIAIAKKAGKVIIGPATVGGIQAGSFKIGNTAGTID 163 Query: 142 -IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 IM ++R GSVG +S+SG L+ E S+ G + IGGD G+ D F Sbjct: 164 NIMACKLYRSGSVGFVSKSGGLSNEMYNVLSRCTDGIYEGIAIGGDAFPGSTLTDHALRF 223 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTA---PPGRTMGH 256 + IV++GE+GG E + D K+G KPI +V+G A P GH Sbjct: 224 EKLPEVKMIVVLGELGGWDEYG----IVDALKKGEITKPICAWVSGTVAKIFPTEVQFGH 279 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPS 285 AGA G A+ K N++++AG + S Sbjct: 280 AGAKSGGETESADAKNNSLRDAGAIVPTS 308 >gi|114055003|gb|ABI50080.1| ATP citrate lyase alpha subunit [Desulfurobacterium thermolithotrophum] Length = 546 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 35/308 (11%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQT--------QVVGGIHPKKGSTYWTGGN- 53 +L D+NTK + L A ++ + Y T +V +K ++ G Sbjct: 7 VLFDRNTKAIFWNLNRNA----IQRMLDYDYTVGRTPSIVAIVAPTQNRKFEKFFFGTQE 62 Query: 54 VNVPVFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCIT-EGIP---VL 108 + +P++ + EA E+ A+ V + A + IE++ V IT EGIP Sbjct: 63 IMIPIYKSTVEAAEKHPEADVLVNFASFRTAYNVTIEALNIPTIRTVAITAEGIPERLAR 122 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSG 160 DM KA+L +IGP G + + +IG I+ + R GS G+++RSG Sbjct: 123 DMA-YKAKL--LGKWIIGPATVGGIAAGAFRIGNAGGTIENIVKSKLHRPGSCGLVTRSG 179 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 L E ++ G + IGGD G++F+D L F + + ++M+GE+GG E Sbjct: 180 GLFNELSNIIARNADGIVEGIAIGGDRFPGSDFLDHLIRFQKNPQVKYMIMLGEVGGELE 239 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKTAPP---GRTMGHAGAVISGGKGGAEDKINAMKE 277 + A+ +K KP++ + G A GHAGA + A+ K A+KE Sbjct: 240 YKVAEAIKSGLI---TKPVIAWCIGTIAKHFGGEVQFGHAGAKAGADRETADAKNRALKE 296 Query: 278 AGICIAPS 285 AG + S Sbjct: 297 AGAIVPDS 304 >gi|254456844|ref|ZP_05070272.1| ATP-citrate synthase subunit 1 [Campylobacterales bacterium GD 1] gi|207085636|gb|EDZ62920.1| ATP-citrate synthase subunit 1 [Campylobacterales bacterium GD 1] Length = 604 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 77/255 (30%), Positives = 118/255 (46%), Gaps = 20/255 (7%) Query: 43 KKGSTYWTGGNVNVPVFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVC 100 K ++ V +P+F T AEAK + A+ + + A D +E++ I+ Sbjct: 49 KFDKFFYGPDEVMIPLFRTTAEAKAAQPQADVLLNFASFRTAYDVTMEALNLGGFTSIMI 108 Query: 101 ITEGIPVLDMVRVKARLEKSSS-RLIGPNCPGILTPDSCKIGIMPGSI--------FRKG 151 EGIP + R + + +IGP G + P + KI + G+I R G Sbjct: 109 TAEGIPE-RLARAMNEFARGKNVTVIGPATVGAIAPGAFKIANIGGTIENIVQSKLHRAG 167 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 S G+++RSG L E S G + V IGGD G+ FID L A+ + +++ Sbjct: 168 SCGLVTRSGGLFNELSNIISLNADGIAEGVAIGGDRFVGSVFIDNLLRMEANPEVKYMLL 227 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGG 267 +GE+GG+ E + D K G+ KPI+ + G K G GHAGA + + Sbjct: 228 LGEVGGTEEYKVI----DAIKAGKLTKPIIAWCIGTIAKHYDSGVQFGHAGASANDDRET 283 Query: 268 AEDKINAMKEAGICI 282 AE K AM+E GI + Sbjct: 284 AESKNTAMREVGIHV 298 >gi|34558815|gb|AAQ75159.1| citrate lyase subunit 2 [Alvinella pompejana epibiont 7G3] Length = 601 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 77/267 (28%), Positives = 121/267 (45%), Gaps = 18/267 (6%) Query: 48 YWTGGNVNVPVFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCIT-EGI 105 +W + VP++ A+AK+ + A+ + + A + E+++ ++ IT EGI Sbjct: 54 FWGADEIMVPIYRNTADAKKAQPQADVLLNFASFRTAYNVTNEALDIGGFRVIMITAEGI 113 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKI--------GIMPGSIFRKGSVGILS 157 P + + +IGP G + P + KI I+ + R GS G+++ Sbjct: 114 PERLARAMNQKARDLGVTVIGPATVGAIAPGAFKIANIGGTIQNIIKSKLHRAGSCGLVT 173 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 RSG L E S G + V IGGD G+ FID L + + +V++GE+GG Sbjct: 174 RSGGLFNELSNIISLNADGIAEGVAIGGDRFVGSTFIDNLLRMEKNPDVKYMVLLGEVGG 233 Query: 218 SAEEEAAQFLKDEAKRGR-KKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKIN 273 E + + K G KPI+ + G K G GHAGA + AE K Sbjct: 234 IEEYKVIE----AVKSGEITKPIIAWCIGTIAKYYDSGVQFGHAGASANSDMETAEAKNK 289 Query: 274 AMKEAGICIAPSPARIGRSLVELLGSL 300 AMKEAGI + S + ++ E+ SL Sbjct: 290 AMKEAGIHVPSSFNDLPATIKEVYESL 316 >gi|298707507|emb|CBJ30109.1| atp-citrate synthase [Ectocarpus siliculosus] Length = 1098 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 76/268 (28%), Positives = 113/268 (42%), Gaps = 25/268 (9%) Query: 13 VQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKER---- 68 VQG+ E+ + C G H K YW +PV+T++AEA +R Sbjct: 509 VQGMLDFDFMCKREKPSVACMVFPFSGNHYIK--FYWGTAETLIPVYTSIAEAVKRHPTV 566 Query: 69 -TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGP 127 N S DA+ + I + I EG+P + ++ LIGP Sbjct: 567 SVMVNFSSFRSVYETTMDAL--NYSDTIKTLAIIAEGVPESQTREIIKAADEKKVGLIGP 624 Query: 128 NCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 G + P +IG I+ ++R G+V +S+SG ++ E ++ G Sbjct: 625 ATVGGIKPGCMRIGNTGGMLDNIVMSKLYRPGTVAYVSKSGGMSNELNNIIARNSDGVFE 684 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKP 238 V IGGD GT FID L + + +V++GE+GG+ E + D K GR KP Sbjct: 685 GVAIGGDRYPGTRFIDHLLRYQDNPTVSMLVLLGEVGGADEYDVC----DALKSGRITKP 740 Query: 239 IVGFVAGKTA---PPGRTMGHAGAVISG 263 +V + G A P GHAGA G Sbjct: 741 VVAWCIGTCASIFPFEVQFGHAGACARG 768 >gi|188996977|ref|YP_001931228.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfurihydrogenibium sp. YO3AOP1] gi|188932044|gb|ACD66674.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfurihydrogenibium sp. YO3AOP1] Length = 616 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 80/301 (26%), Positives = 139/301 (46%), Gaps = 27/301 (8%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGI----HPKKGSTYWTG-GNVNVP 57 +L DKNTK + L A + + ++ + I + ++ G + +P Sbjct: 7 LLFDKNTKAIFWNLNTSAIQRMLDYDYVVGRSPSIAAIVAPTSERSFEKFFYGTKEIIIP 66 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIP---VLDMVR 112 ++ + +A K A+ + + A +E+ E +I IV EGIP DM R Sbjct: 67 IYKSTKDAAKFHPEADVLLNFASFRTAYLVTLEAFEIPQIRTIVITAEGIPERYARDM-R 125 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKI--------GIMPGSIFRKGSVGILSRSGTLTY 164 +KA+ + +IGP G + P + +I I+ + R GSVG+++RSG L Sbjct: 126 IKAK--QLGKWIIGPATVGGIVPGAFRIANTGGTIENIIASKLHRPGSVGLVTRSGGLFN 183 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E ++ G + + IGGD G++F+D + F + + ++++GE+GG AE + Sbjct: 184 ELSNIIARNADGVAEGIAIGGDRFPGSDFLDHMLRFEKNPQVKFMILLGEVGGEAEYKVV 243 Query: 225 QFLKDEAKRGRKKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 + +K+ KP++G+ G K GHAGA + A+ K AMKE GI Sbjct: 244 EAVKNGLI---TKPVIGWCIGTISKFFGGEVQFGHAGAKAGTDRETADAKNRAMKEVGIH 300 Query: 282 I 282 + Sbjct: 301 V 301 >gi|224372753|ref|YP_002607125.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) [Nautilia profundicola AmH] gi|223589182|gb|ACM92918.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) [Nautilia profundicola AmH] Length = 615 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 120/248 (48%), Gaps = 28/248 (11%) Query: 54 VNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCIT-EGIPVLDMV 111 V +P++ + EA K A+ + + A D ++++ + ++ IT EGIP Sbjct: 61 VMIPIYRSTEEAVKNHPNADVLLNFASFRTAYDVTMDALAMDQFRVIMITAEGIP----- 115 Query: 112 RVKARLEKSSSR-----LIGPNCPGILTPDSCKIGIMPGSI--------FRKGSVGILSR 158 AR+ ++R +IGP G + P + K+ + G+I R GS G+++R Sbjct: 116 ERNARIMNKTAREKGVTIIGPATVGAIAPGAFKVANIGGTIENIVKSKLHRAGSAGLVTR 175 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGS 218 SG L E + G + V IGGD G+ F+D + + + ++++GE+GG Sbjct: 176 SGGLFNELSNIIALNADGIAEGVAIGGDRFVGSVFLDHMLRMEKNPKVKYMILLGEVGGR 235 Query: 219 AEEEAAQFLKDEAKRGR-KKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINA 274 E + + +K+ G+ KP++G+ G K G GHAGA + + AE K A Sbjct: 236 EEYKVIEAIKE----GKITKPVIGWCIGTIAKHFSSGVQFGHAGASANADEETAEAKNRA 291 Query: 275 MKEAGICI 282 MKEAGI + Sbjct: 292 MKEAGIHV 299 >gi|281202364|gb|EFA76569.1| ATP citrate synthase [Polysphondylium pallidum PN500] Length = 626 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 82/284 (28%), Positives = 129/284 (45%), Gaps = 24/284 (8%) Query: 36 VVGGIHPKKGSTYWTG----GNVNVPVFTTVAEAKERTAANASVI--YVPPSGAGDAIIE 89 V G IHP ++ + +PV+ ++A+A E + NA V + A + ++ Sbjct: 57 VAGLIHPGAEGGFYKAFFGFKELVIPVYNSIADACE-SCPNADVFLNFASHRSAYQSSVK 115 Query: 90 SI-EAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG------- 141 ++ + I +V I EG+P + + A +K++ +IGP G + + KIG Sbjct: 116 ALNQPSIRTVVIIAEGVPENEARALIALAKKNNKVIIGPATVGGIQAGAFKIGNTAGTID 175 Query: 142 -IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 IM ++R GSVG +S+SG L+ E S+ G + IGGD G+ D F Sbjct: 176 NIMACKLYRSGSVGFVSKSGGLSNEMYNVLSKNTDGIYEGIAIGGDAFPGSTLTDHALRF 235 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTA---PPGRTMGH 256 + IV++GE+GG E + LK G+ KP+ +V+G A P GH Sbjct: 236 EKLLEVKMIVILGELGGWDEYGIVEALKS----GQITKPVCAWVSGTVARIFPTEVQFGH 291 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 AGA G AE K A+K AG + S + + G L Sbjct: 292 AGAKSGGETESAEAKNAALKGAGAIVPSSFEDFANVIADTYGKL 335 >gi|324502258|gb|ADY40994.1| ATP-citrate synthase [Ascaris suum] Length = 1117 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 83/317 (26%), Positives = 140/317 (44%), Gaps = 24/317 (7%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L + +TK ++ G KA G + Q VV +P K Y+ + +P Sbjct: 499 LFESDTKAVIWGQQIKAVQGMLDFDFVCGREQPSVVASTYPFTGDHKQKFYFGHKEILIP 558 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIP-VLDMVRVK 114 + ++ A A+ V + + ++E++E +I +I I EG+P L +K Sbjct: 559 AYKSMKSAFTSHPDASVMVSFASLRSVYETVLEALEHPQIRVIAIIAEGVPENLTRKLIK 618 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 A E+ + LIGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 619 AASERGVT-LIGPATVGGIKPGCFKIGNTGGMMDNILSSKLYRPGSVAYVSRSGGMSNEL 677 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +Q G + IGGD G+ + D + + D+ + +V++GE+GG E + Sbjct: 678 NNIIAQNTDGVFEGIAIGGDRYPGSTYTDHILRYEHDDRVKMMVLLGEVGGVEEYKIVNA 737 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIA 283 LK+ + KP++ + G A + GHAGA A K A++EAG + Sbjct: 738 LKE---KKITKPLIAWCIGTCADYITSEVQFGHAGASADAKAETAAAKNEALREAGAYVP 794 Query: 284 PSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 795 TSFDDLGTQIAAVYKDL 811 >gi|319956331|ref|YP_004167594.1| ATP-citrate lyase/succinyl-CoA ligase [Nitratifractor salsuginis DSM 16511] gi|319418735|gb|ADV45845.1| ATP-citrate lyase/succinyl-CoA ligase [Nitratifractor salsuginis DSM 16511] Length = 605 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 21/269 (7%) Query: 48 YWTGGNVNVPVFTTVAEAKERTAANASVI--YVPPSGAGDAIIES--IEAEIPLIVCITE 103 +W G + + VF + EA NA V+ + A D +E+ I + +I+ E Sbjct: 54 FWGGDEIMIDVFRSTEEAVA-AHPNADVLLNFASFRTAYDVTMEALAIPGQFRVIMVTAE 112 Query: 104 GIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKI--------GIMPGSIFRKGSVGI 155 GIP + + +IGP G + P + KI I+ + R GS G+ Sbjct: 113 GIPERLARTMNQAARDAGVTVIGPATVGAIAPGAFKIANIGGTIENIIKSKLHRAGSAGL 172 Query: 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEI 215 ++RSG L E + G + V IGGD G+ FID + ++ + ++++GE+ Sbjct: 173 VTRSGGLFNELCNIIALNADGIAEGVAIGGDRFVGSVFIDNMLRMESNPDVKYMILLGEV 232 Query: 216 GGSAEEEAAQFLKDEAKRGR-KKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDK 271 GG+ E + + +K G+ KP++ + G K G GHAGA + + A K Sbjct: 233 GGTEEYKVIEAVKS----GKITKPVIAWCIGTIAKHFSSGVQFGHAGASANADRETAAAK 288 Query: 272 INAMKEAGICIAPSPARIGRSLVELLGSL 300 AM+EAGI + S + R + E+ L Sbjct: 289 NEAMREAGIHVPESFNDLPRVINEVYTKL 317 >gi|34558783|gb|AAQ75128.1| citrate lyase subunit 2 [Alvinella pompejana epibiont 6C6] Length = 600 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 85/319 (26%), Positives = 136/319 (42%), Gaps = 22/319 (6%) Query: 1 MSILVDKNTKVLV--QGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTY----WTGGNV 54 M L KNT+ + T + I + V G + P + + W + Sbjct: 1 MERLFTKNTQAIFWNNNKTAIQRMLDYDYVIKRDKPSVAGIVAPTSSNKFEKFFWGADEI 60 Query: 55 NVPVFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCIT-EGIPVLDMVR 112 VP++ A+AK+ + A+ + + A + E+++ ++ IT EGIP Sbjct: 61 MVPIYRNTADAKKAQPQADVLLNFASFRTAYNVTNEALDIGGFRVIMITAEGIPERLARA 120 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKI--------GIMPGSIFRKGSVGILSRSGTLTY 164 + + +IGP G + P + KI I+ + R GS G+++RSG L Sbjct: 121 MNQKARDLGVTVIGPATVGAIAPGAFKIANIGGTIQNIIKSKLHRAGSCGLVTRSGGLFN 180 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E S G + V IGGD G+ FID L + + +V++GE+GG E + Sbjct: 181 ELSNIISLNADGIAEGVAIGGDRFVGSTFIDNLLRMEKNPDVKYMVLLGEVGGIEEYKVI 240 Query: 225 QFLKDEAKRGRKKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 + +K KPI+ + G K G GHAGA + AE K AM EAGI Sbjct: 241 EAVKSGEI---TKPIIAWCIGTIAKYYDSGVQFGHAGASANSDMETAEAKNRAMAEAGIH 297 Query: 282 IAPSPARIGRSLVELLGSL 300 + S + ++ E+ SL Sbjct: 298 VPSSFNDLPATIKEVYESL 316 >gi|28866843|dbj|BAC65219.1| putative succinyl-CoA synthase [Fusarium sp. IFO 7772] Length = 154 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/127 (44%), Positives = 80/127 (62%), Gaps = 6/127 (4%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +D T+V+ QG TGK T + + I Y T+VVGG+ P KG N+ +PVF T Sbjct: 33 NLKLDAQTRVIYQGFTGKVATKNAQDTIEYG-TKVVGGVSPGKGGQ----QNLGLPVFNT 87 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + +ASV++VP A AIIE+IEAEIPL+V + E +PV DM+ V L +S Sbjct: 88 VREAVDEVNPSASVVFVPAHSAALAIIEAIEAEIPLVVSVAEFVPVRDMLLVHEVLRTQS 147 Query: 121 SSRLIGP 127 +RL+GP Sbjct: 148 KTRLVGP 154 >gi|186470803|ref|YP_001862121.1| CoA-binding domain-containing protein [Burkholderia phymatum STM815] gi|184197112|gb|ACC75075.1| CoA-binding domain protein [Burkholderia phymatum STM815] Length = 895 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 86/288 (29%), Positives = 122/288 (42%), Gaps = 27/288 (9%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 ++ + + +V V + G + T + + VV G P KG ++PVF Sbjct: 18 LADIATREDRVCVLNILGGESSDVTPVSHAFSGANVVFGTAPGKGGQVLATPAGDIPVFN 77 Query: 61 TVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPL--IVCITEGIPVLDMVRVKARL 117 V E E N V+Y+PPS A D + E I L I ITE I V D ++A Sbjct: 78 NVREGLEAGHRFNCGVVYLPPSAARDGVAELIRVNPDLRKIFIITEKIAVHDAREIRAMG 137 Query: 118 EKSSSRLIGPNCPGILTPDSCKI----GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +++ + G N G+ DS + G PG+ R+GSV I S SG + Sbjct: 138 QQAGIDIFGAN--GLGVADSWQRVRIGGDDPGATLRQGSVAIFSNSGGFSTTIAQYLRMS 195 Query: 174 GLGQSTAVGIGGD---PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 G G ST + G D EF L D +++ V+ E GG E + A F Sbjct: 196 GWGTSTVISSGKDVYIHYAAPEFAFALA---NDARSKAAVLYCEPGGYYEAD-AHF---- 247 Query: 231 AKRGRKKPIVGFVAGK-TAPPGRTMGHAGAVISGGKGGAEDKINAMKE 277 KP+V V G+ + R +GHAGA +SGG A K KE Sbjct: 248 -----NKPVVACVVGRWKSRLTRAVGHAGA-MSGGADDALAKERWFKE 289 >gi|302829647|ref|XP_002946390.1| hypothetical protein VOLCADRAFT_79099 [Volvox carteri f. nagariensis] gi|300268136|gb|EFJ52317.1| hypothetical protein VOLCADRAFT_79099 [Volvox carteri f. nagariensis] Length = 607 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 18/251 (7%) Query: 48 YWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGI 105 ++ + +PV+ + AEA ++ A+ + Y A ++ +E+++A I ++ I EG+ Sbjct: 56 FFGKAEIAIPVYGSTAEATRKHPKADVFINYASFRSAYESSLEALKAATIRVVAIIAEGV 115 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILS 157 P D + A ++ +IGP G + KIG I+ + R GSVG +S Sbjct: 116 PEKDTKHLIAYARANNKVIIGPATVG--GAGAFKIGDTAGTLDNILACKLHRPGSVGFVS 173 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E ++ G + IGGD G+ D + A + IV++GE+GG Sbjct: 174 KSGGMSNEMYNVLARATDGLYEGIAIGGDTFPGSTLSDHCLRYEHVPAIKMIVVLGELGG 233 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 E + +K EA KP+V +V+G A ++ GHAGA G A+ K A Sbjct: 234 RDEYGLVEAMKAEAI---TKPVVAWVSGTCAKLFKSEVQFGHAGARSGGDLDSAQAKNAA 290 Query: 275 MKEAGICIAPS 285 +++AG + S Sbjct: 291 LRDAGALVPES 301 >gi|114055040|gb|ABI50085.1| ATP citrate lyase alpha subunit [Sulfurihydrogenibium subterraneum] Length = 546 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 80/301 (26%), Positives = 137/301 (45%), Gaps = 27/301 (8%) Query: 3 ILVDKNTKVLVQGL-TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTY----WTGGNVNVP 57 +L D+NTK + L T ++ +V + P ++ + + +P Sbjct: 7 LLFDRNTKAIFWNLNTNTIQRMLDYDYVVGRSPSIVAIVAPTSERSFEKFFYGTKEIIIP 66 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCI-TEGIP---VLDMVR 112 ++ + EA K A+ + + A +E+ E + I EGIP DM R Sbjct: 67 IYKSTTEAAKLHPEADVLLNFASFRTAYPVTLEAFEIPTIRTIIITAEGIPERYARDM-R 125 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKI--------GIMPGSIFRKGSVGILSRSGTLTY 164 +KA+ + +IGP G + P + +I I+ + R GSVG+++RSG L Sbjct: 126 IKAK--QLGKWIIGPATVGGIAPGAFRIANTGGTIENIIASKLHRPGSVGLVTRSGGLFN 183 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E ++ G S + IGGD G++F+D + F + + ++++GE+GG AE + Sbjct: 184 ELSNIIARNADGVSEGIAIGGDRFPGSDFLDHMLRFEKNPQIKFMILLGEVGGEAEYKVV 243 Query: 225 QFLKDEAKRGRKKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 + +K+ KP++G+ G K GHAGA + A+ K AMKEAGI Sbjct: 244 EAVKNGLI---TKPVIGWCIGTISKFFGGEVQFGHAGAKAGADRETADAKNKAMKEAGIH 300 Query: 282 I 282 + Sbjct: 301 V 301 >gi|147838144|emb|CAN65200.1| hypothetical protein VITISV_028197 [Vitis vinifera] Length = 131 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 55/84 (65%), Gaps = 16/84 (19%) Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG--------------AVISGGKGGAEDK 271 +K E+K +KPIV F+AG TAPPGR MGHAG A++SGGKG A+DK Sbjct: 40 LIKQESKT--EKPIVAFIAGLTAPPGRRMGHAGDNSVGVTFDVGYTEAIVSGGKGTAQDK 97 Query: 272 INAMKEAGICIAPSPARIGRSLVE 295 I ++EAG+ + SPA++G +++E Sbjct: 98 IKTLREAGVTVVESPAKMGVAMLE 121 >gi|302802744|ref|XP_002983126.1| hypothetical protein SELMODRAFT_271604 [Selaginella moellendorffii] gi|300149279|gb|EFJ15935.1| hypothetical protein SELMODRAFT_271604 [Selaginella moellendorffii] Length = 607 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 71/246 (28%), Positives = 120/246 (48%), Gaps = 18/246 (7%) Query: 54 VNVPVF-TTVAEAKERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMV 111 + VPV+ + VA K A+ + + A + +E++ + I ++ I EG+P D Sbjct: 61 IAVPVYGSVVAGCKAHPTADVFINFASFRSAFASSMEALKQPTIRVVAIIAEGVPEGDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI--------FRKGSVGILSRSGTLT 163 ++ A ++ +IGP G + + KIG G++ +R GSVG +S+SG ++ Sbjct: 121 KLIAYARANNKVVIGPATVGGMQAGAFKIGDTAGTLDNIVSCKLYRPGSVGFVSKSGGMS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E ++ G + IGGD G+ D + F + IV++GE+GG+ E Sbjct: 181 NEMYNVLARATDGLYEGIAIGGDVFPGSTLSDHVLRFNNIPQIKLIVVLGELGGTDEYSL 240 Query: 224 AQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAG 279 + L ++GR KP+V +V+G A ++ GHAGA G A+ K A+KEAG Sbjct: 241 VEAL----QQGRVHKPVVAWVSGTCAKLFKSEVQFGHAGAKSGGDLESAQGKNKALKEAG 296 Query: 280 ICIAPS 285 + S Sbjct: 297 AIVPTS 302 >gi|302764914|ref|XP_002965878.1| hypothetical protein SELMODRAFT_270523 [Selaginella moellendorffii] gi|300166692|gb|EFJ33298.1| hypothetical protein SELMODRAFT_270523 [Selaginella moellendorffii] Length = 607 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 71/246 (28%), Positives = 120/246 (48%), Gaps = 18/246 (7%) Query: 54 VNVPVF-TTVAEAKERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMV 111 + VPV+ + VA K A+ + + A + +E++ + I ++ I EG+P D Sbjct: 61 IAVPVYGSVVAGCKAHPTADVFINFASFRSAFASSMEALKQPTIRVVAIIAEGVPEGDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLT 163 ++ A ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ Sbjct: 121 KLIAYARANNKVVIGPATVGGMQAGAFKIGDTAGTLDNIVSCKLYRPGSVGFVSKSGGMS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E ++ G + IGGD G+ D + F + IV++GE+GG+ E Sbjct: 181 NEMYNVLARATDGLYEGIAIGGDVFPGSTLSDHVLRFNNIPQIKLIVVLGELGGTDEYSL 240 Query: 224 AQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAG 279 + L ++GR KP+V +V+G A ++ GHAGA G A+ K A+KEAG Sbjct: 241 VEAL----QQGRVHKPVVAWVSGTCAKLFKSEVQFGHAGAKSGGDLESAQGKNKALKEAG 296 Query: 280 ICIAPS 285 + S Sbjct: 297 AIVPTS 302 >gi|152990402|ref|YP_001356124.1| ATP citrate synthase, subunit 2 [Nitratiruptor sp. SB155-2] gi|151422263|dbj|BAF69767.1| ATP citrate synthase, subunit 2 [Nitratiruptor sp. SB155-2] Length = 614 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 30/252 (11%) Query: 54 VNVPVFTTVAEAKERTAANASVI--YVPPSGAGDAIIESIEAEIPLIVCIT-EGIPVLDM 110 V +P++ + EA NA V+ + A D ++++ + + IT EGIP Sbjct: 59 VMIPIYRSTEEAAA-AHPNADVLLNFASFRTAYDVTMDALRFDQFKTIMITAEGIP---- 113 Query: 111 VRVKARLEKSSSR-----LIGPNCPGILTPDSCKIGIMPGSI--------FRKGSVGILS 157 AR+ ++R +IGP G +TP + K+ + G+I R GS G+++ Sbjct: 114 -ERLARIMNKTAREQGVLIIGPATVGAITPGAFKVANIGGTIENIVKSKLHRPGSCGLVT 172 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 RSG L E + G + V IGGD G+ FID L D + ++++GE+GG Sbjct: 173 RSGGLFNELCNIIALNADGVADGVAIGGDRFVGSVFIDHLLRMEKDPNVKYMLLLGEVGG 232 Query: 218 SAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKIN 273 E + + K G+ KP++G+ G A G GHAGA + + A K Sbjct: 233 REEYKVIE----AVKSGKITKPVIGWCIGTIAQHFSTGVQFGHAGASANADEETAVAKNQ 288 Query: 274 AMKEAGICIAPS 285 AM+EAGI + S Sbjct: 289 AMREAGIHVPDS 300 >gi|302821521|ref|XP_002992423.1| hypothetical protein SELMODRAFT_162315 [Selaginella moellendorffii] gi|300139839|gb|EFJ06573.1| hypothetical protein SELMODRAFT_162315 [Selaginella moellendorffii] Length = 611 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 18/246 (7%) Query: 54 VNVPVFTTV-AEAKERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMV 111 + VPV+ +V A + A+ + + A + ++++ ++ I +IV I EG+P D Sbjct: 61 IAVPVYGSVQAACRAHPVADVFINFASFRSAFQSSMDALKQSTIRVIVIIAEGVPEADTK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLT 163 ++ A + +IGP G + + KIG I+ ++R GSVG +S+SG ++ Sbjct: 121 KLIAFAALNHKVVIGPATVGGIQAGAFKIGDTAGTLENIIQSKLYRPGSVGFVSKSGGMS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E ++ G + IGGD G+ D + F + IV++GE+GG E Sbjct: 181 NEMYNVIARVTDGLYEGIAIGGDVYPGSTLSDHVLRFNNIPQIKMIVVLGELGGRDEYSL 240 Query: 224 AQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAG 279 + L K+G+ KP+V +V+G A ++ GHAGA G A+ K A++EAG Sbjct: 241 VEAL----KQGKVTKPVVAWVSGTCAKLFKSEVQFGHAGAKSGGDMESAQGKNKALQEAG 296 Query: 280 ICIAPS 285 + S Sbjct: 297 AIVPTS 302 >gi|302769203|ref|XP_002968021.1| hypothetical protein SELMODRAFT_169564 [Selaginella moellendorffii] gi|300164759|gb|EFJ31368.1| hypothetical protein SELMODRAFT_169564 [Selaginella moellendorffii] Length = 611 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 18/246 (7%) Query: 54 VNVPVFTTV-AEAKERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMV 111 + VPV+ +V A + A+ + + A + ++++ ++ I +IV I EG+P D Sbjct: 61 IAVPVYGSVQAACRAHPVADVFINFASFRSAFQSSMDALKQSTIRVIVIIAEGVPEADTK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLT 163 ++ A + +IGP G + + KIG I+ ++R GSVG +S+SG ++ Sbjct: 121 KLIAFAALNHKVVIGPATVGGIQAGAFKIGDTAGTLENIIQSKLYRPGSVGFVSKSGGMS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E ++ G + IGGD G+ D + F + IV++GE+GG E Sbjct: 181 NEMYNVIARVTDGLYEGIAIGGDVYPGSTLSDHVLRFNNIPQIKMIVVLGELGGRDEYSL 240 Query: 224 AQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAG 279 + L K+G+ KP+V +V+G A ++ GHAGA G A+ K A++EAG Sbjct: 241 VEAL----KQGKVTKPVVAWVSGTCAKLFKSEVQFGHAGAKSGGDMESAQGKNKALQEAG 296 Query: 280 ICIAPS 285 + S Sbjct: 297 AIVPTS 302 >gi|66816585|ref|XP_642302.1| ATP citrate synthase [Dictyostelium discoideum AX4] gi|74856657|sp|Q54YA0|ACLY_DICDI RecName: Full=Probable ATP-citrate synthase; AltName: Full=ATP-citrate (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme gi|60470365|gb|EAL68345.1| ATP citrate synthase [Dictyostelium discoideum AX4] Length = 622 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 83/272 (30%), Positives = 122/272 (44%), Gaps = 23/272 (8%) Query: 33 QTQVVGG-IHP-KKGSTY---WTGGNVNVPVFTTVAEAKERTAANASVIY---VPPSGAG 84 T VGG IHP G Y + + +PV+ +V+EA ++ NA V S Sbjct: 49 DTPSVGGLIHPGSDGGMYKAFFGFKELVIPVYNSVSEACQQ-CPNADVFLNFASHRSAYQ 107 Query: 85 DAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--- 141 +++ E I +V I EG+P + + + +K +IGP G + KIG Sbjct: 108 SSLLALREPSIQTVVIIAEGVPENEARSLISIAKKLGKVIIGPATVGGIQAGCFKIGNTA 167 Query: 142 -----IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 IM ++R GSVG +S+SG L+ E S+ G + IGGD G+ D Sbjct: 168 GTIVYIMACKLYRSGSVGFVSKSGGLSNEMYNVLSRCTDGIYEGIAIGGDAFPGSTLTDH 227 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA---PPGRT 253 + + IV++GE+GG E + LK K KPI +V+G A P Sbjct: 228 ALRYEKLPEVQMIVILGELGGWDEYGIVEALK---KGEITKPICAWVSGTVAKIFPTEVQ 284 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 GHAGA G A+ K A++EAG + S Sbjct: 285 FGHAGAKSGGETESADAKNKALREAGAVVPTS 316 >gi|313245433|emb|CBY40167.1| unnamed protein product [Oikopleura dioica] Length = 96 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 5/78 (6%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +TKV+VQG TGK GT+H+EQAI Y T VVGG+ P KG G VPVF + Sbjct: 24 NLKIGADTKVIVQGFTGKQGTYHSEQAIAYG-THVVGGVTPGKGGQEHLG----VPVFNS 78 Query: 62 VAEAKERTAANASVIYVP 79 VA+A++ T A+A+VIYVP Sbjct: 79 VADARKGTGADATVIYVP 96 >gi|325118886|emb|CBZ54438.1| cDNA FLJ55447, highly similar to ATP-citrate synthase, related [Neospora caninum Liverpool] Length = 1295 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 19/229 (8%) Query: 46 STYWTGGNVNVPVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEA--EIPLIVCIT 102 S Y+ V +PV+ T+ EA + +I + A ++E ++ IV I Sbjct: 728 SFYFGTEEVLLPVYQTLQEAVHHFPEVSVLINFASMRSAASVTRLALETAPQLRTIVVIA 787 Query: 103 EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVG 154 EG+P + ++ A LIGP G +T + +IG +M ++R GSVG Sbjct: 788 EGVPEREARQLAAETRARGVCLIGPATVGGITSGAFRIGNTGGTLENVMNARLYRPGSVG 847 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 +++SG + E S G A+ IGGD GT +D L F + + +V++GE Sbjct: 848 CVTKSGGMLNEMNNILSIVSDGTYEAIAIGGDRFPGTSMLDHLLRFERNPDIKFLVLLGE 907 Query: 215 IGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGA 259 +GG E E + +KD GR KP++ + G A T GHAGA Sbjct: 908 VGGGMEYEVVEAIKD----GRLTKPLIAWCVGTCASLFSTEVSFGHAGA 952 >gi|225848356|ref|YP_002728519.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(citrate cleavage enzyme) [Sulfurihydrogenibium azorense Az-Fu1] gi|225643595|gb|ACN98645.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(Citrate cleavage enzyme) [Sulfurihydrogenibium azorense Az-Fu1] Length = 616 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 78/301 (25%), Positives = 137/301 (45%), Gaps = 27/301 (8%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGI----HPKKGSTYWTG-GNVNVP 57 +L D+NTK + L A + + ++ + I + ++ G + +P Sbjct: 7 LLFDRNTKAIFWNLNTNAIQRMLDYDYVVGRSPSIAAIVAPTSERSFEKFFYGTKEIIIP 66 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCI-TEGIP---VLDMVR 112 ++ + EA K A+ + + A +E+ E + I EGIP DM R Sbjct: 67 IYKSTKEAAKFHPEADVLLNFASFRTAYPVTLEAFEIPTIRTIIITAEGIPERFARDM-R 125 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKI--------GIMPGSIFRKGSVGILSRSGTLTY 164 +KA+ + +IGP G + P + +I I+ + R GSVG+++RSG L Sbjct: 126 IKAK--QLGKWIIGPATVGGIAPGAFRIANTGGTIENIIASKLHRPGSVGLVTRSGGLFN 183 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E ++ G + + IGGD G++F+D + F + E ++++GE+GG AE + Sbjct: 184 ELSNIIARNADGVAEGIAIGGDRFPGSDFLDHMLRFEKNPQVEFMILLGEVGGEAEYKVV 243 Query: 225 QFLKDEAKRGRKKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 + +K+ KP++G+ G K GHAGA + A+ K AM+E GI Sbjct: 244 EAVKNGLI---TKPVIGWCIGTISKFFGGEVQFGHAGAKAGVDRETADAKNRAMREVGIH 300 Query: 282 I 282 + Sbjct: 301 V 301 >gi|149195271|ref|ZP_01872360.1| ATP-citrate lyase/succinyl-CoA ligase [Caminibacter mediatlanticus TB-2] gi|149134613|gb|EDM23100.1| ATP-citrate lyase/succinyl-CoA ligase [Caminibacter mediatlanticus TB-2] Length = 615 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 73/245 (29%), Positives = 123/245 (50%), Gaps = 22/245 (8%) Query: 54 VNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCIT-EGIP--VLD 109 V +P++ + A+A K A+ + + A D E+++ + ++ IT EGIP + Sbjct: 61 VMIPIYKSTADAVKNHPNADVLLNFASFRTAYDVTNEALDMDQFRVIMITAEGIPERLAR 120 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKI--------GIMPGSIFRKGSVGILSRSGT 161 ++ KAR EK + +IGP G ++P + K+ I+ + R GS G+++RSG Sbjct: 121 LMNKKAR-EKGVT-IIGPATVGAISPGAFKVANIGGTIENIVKSKLHRAGSAGLVTRSGG 178 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 L E + G + V IGGD G+ FID + + + +V++GE+GG E Sbjct: 179 LFNELSNIIALNADGIAEGVAIGGDRFVGSTFIDHMLRMEKNPDVKYMVLLGEVGGREEY 238 Query: 222 EAAQFLKDEAKRGR-KKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKE 277 + + +K+ G+ KP++ + G K G GHAGA + + AE K AM+E Sbjct: 239 KIIEAIKE----GKITKPVIAWCIGTIAKHFSSGVQFGHAGASANAEEETAEAKNRAMRE 294 Query: 278 AGICI 282 AGI + Sbjct: 295 AGIHV 299 >gi|304438104|ref|ZP_07398047.1| succinyl-CoA synthetase subunit alpha [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368877|gb|EFM22559.1| succinyl-CoA synthetase subunit alpha [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 76 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/61 (57%), Positives = 47/61 (77%) Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+ F+AG+ APPG+ MGHAGA+ISGGKG A DK+ A+ AGI +A + A IG ++V+L Sbjct: 4 KPVSAFIAGRQAPPGKRMGHAGAIISGGKGTAADKVAALNAAGIPVADTVAHIGETMVKL 63 Query: 297 L 297 L Sbjct: 64 L 64 >gi|332260732|ref|XP_003279435.1| PREDICTED: ATP-citrate synthase [Nomascus leucogenys] Length = 1095 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 85/321 (26%), Positives = 141/321 (43%), Gaps = 38/321 (11%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 490 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ ++I I I EGIP ++ Sbjct: 550 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYSQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF----LADEATESIV--------MVG 213 S+ G V IGGD + E + + + L TE + G Sbjct: 670 LNNIISRTTDGVYEGVAIGGD--RPAEMLLKSKQWGITALVSGLTEHEIGKHRTGQQRAG 727 Query: 214 EIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAE 269 EIGG+ E + + +K+ GR KPIV + G A + GHAGA + A Sbjct: 728 EIGGTEEYKICRGIKE----GRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAV 783 Query: 270 DKINAMKEAGICIAPSPARIG 290 K A+KEAG+ + S +G Sbjct: 784 AKNQALKEAGVFVPRSFDELG 804 >gi|58260100|ref|XP_567460.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134116646|ref|XP_772995.1| hypothetical protein CNBJ2710 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255615|gb|EAL18348.1| hypothetical protein CNBJ2710 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229510|gb|AAW45943.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 1149 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 111/255 (43%), Gaps = 12/255 (4%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEI 95 GG H +K YW +PV+T+V EA K+ + V + + +E + +I Sbjct: 576 GGHHIQK--FYWGTKETLLPVYTSVGEAIKKHPDVDVVVNFASSRSVYASTLEILSFPQI 633 Query: 96 PLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSI 147 I I EG+P + K +IGP G + P +IG ++ + Sbjct: 634 KAIGIIAEGVPERHARELLHLALKKQVIIIGPATVGGIKPGCFRIGNTGGMMDNLIACKL 693 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 +R GSVG +S+SG ++ E S G V IGGD GT FID L + AD + Sbjct: 694 YRPGSVGYVSKSGGMSNELNNILSYTTNGVYEGVAIGGDRYPGTSFIDHLLRYEADPECK 753 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 ++++GE+GG+ E + +K + K GHAG++ + Sbjct: 754 MLLLLGEVGGTEEYRVIEAVKKGIIKKPIIAWAIGTCAKMFTSEVQFGHAGSMANSDMET 813 Query: 268 AEDKINAMKEAGICI 282 A+ K AM+ AG + Sbjct: 814 ADAKNRAMRAAGFIV 828 >gi|124359946|gb|ABN07962.1| ATP-citrate lyase/succinyl-CoA ligase [Medicago truncatula] Length = 608 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 16/218 (7%) Query: 95 IPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI------- 147 I ++ I EG+P D + A ++ +IGP G + + KIG G+I Sbjct: 104 IRVVAIIAEGVPESDTKELIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIQCK 163 Query: 148 -FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 +R GSVG +S+SG ++ E ++ G + IGGD G+ D + F Sbjct: 164 LYRPGSVGFVSKSGGMSNELYNSIARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQV 223 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVIS 262 + IV++GE+GG E + L K+G+ KP+V +V+G A ++ GHAGA Sbjct: 224 KMIVVLGELGGRDEYSLVEAL----KQGKVTKPVVAWVSGTCATLFKSEVQFGHAGAKSG 279 Query: 263 GGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 G A+ K A++EAG + S S+ E L Sbjct: 280 GDMESAQGKNQALREAGAVVPTSYESFETSIKETFDKL 317 >gi|168016926|ref|XP_001760999.1| predicted protein [Physcomitrella patens subsp. patens] gi|162687685|gb|EDQ74066.1| predicted protein [Physcomitrella patens subsp. patens] Length = 610 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 117/245 (47%), Gaps = 16/245 (6%) Query: 54 VNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMV 111 + VPV ++ A K A+ + + A + +E++ ++ I ++ I EG+P D Sbjct: 61 IAVPVHGSIPSACKVHPTADVFINFASFRSAYASSMEALKQSTIRVVAIIAEGVPEADAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLT 163 R+ A ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ Sbjct: 121 RLIAYARANNKVVIGPATVGGIQAGAFKIGDTAGTLDNIIHCKLYRPGSVGFVSKSGGMS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E ++ G + IGGD G+ D + F + IV++GE+GG E Sbjct: 181 NEMYNVLARVTDGLYEGIAIGGDVYPGSTLSDHVLRFNNIPQIKMIVVLGELGGKDEYSL 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGI 280 LK+ + KP+V +V+G A ++ GHAGA G + A+ K A+ +AG Sbjct: 241 VDALKE---KKVSKPVVAWVSGTCARLFKSEVQFGHAGAKSGGDEESAQAKNKALADAGA 297 Query: 281 CIAPS 285 + S Sbjct: 298 IVPTS 302 >gi|168012925|ref|XP_001759152.1| predicted protein [Physcomitrella patens subsp. patens] gi|162689851|gb|EDQ76221.1| predicted protein [Physcomitrella patens subsp. patens] Length = 610 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 16/245 (6%) Query: 54 VNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMV 111 + VPV ++ A K A+ + + A + +E++ + I ++ I EG+P D Sbjct: 61 IAVPVHGSIPSACKIHPTADVFINFASFRSAYASSMEALKQPTIRVVAIIAEGVPEADAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLT 163 R+ A ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ Sbjct: 121 RLIAFARANNKVVIGPATVGGIQAGAFKIGDTAGTLDNIIHCKLYRPGSVGFVSKSGGMS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E ++ G + IGGD G+ D + F + IV++GE+GG E Sbjct: 181 NEMYNVLARVTDGLYEGIAIGGDVYPGSTLSDHVLRFNNIPQIKMIVVLGELGGRDEYSL 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGI 280 LK E K G KP+V +V+G A ++ GHAGA G + A+ K A+ +AG Sbjct: 241 VDALK-EGKVG--KPVVAWVSGTCARLFKSEVQFGHAGAKSGGDEESAQAKNKALADAGA 297 Query: 281 CIAPS 285 + S Sbjct: 298 IVPTS 302 >gi|168017020|ref|XP_001761046.1| predicted protein [Physcomitrella patens subsp. patens] gi|162687732|gb|EDQ74113.1| predicted protein [Physcomitrella patens subsp. patens] Length = 83 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 3/76 (3%) Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V I GD G++F+D LE + T+ IV++GEIGGS E E F+++ G +KP Sbjct: 1 CVEIAGDSFGGSDFVDCLEKLVNYPNTKDIVLIGEIGGSVEREVTSFIRES---GTQKPA 57 Query: 240 VGFVAGKTAPPGRTMG 255 V F+AGK APPGR MG Sbjct: 58 VTFIAGKVAPPGRQMG 73 >gi|15919087|emb|CAC86995.1| ATP citrate lyase a-subunit [Lupinus albus] Length = 608 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 106/221 (47%), Gaps = 16/221 (7%) Query: 92 EAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI---- 147 ++ I ++ I EG+P D ++ A ++ +IGP G + + KIG G+I Sbjct: 101 QSTIRVVAIIAEGVPESDTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNII 160 Query: 148 ----FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLAD 203 +R GSVG +S+SG ++ E ++ G + IGGD G+ D + F Sbjct: 161 QCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNI 220 Query: 204 EATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGA 259 + IV++GE+GG E + L K+G+ KP+V +V+G A ++ GHAGA Sbjct: 221 PQVKMIVVLGELGGRDEYSLVEAL----KQGKVTKPVVAWVSGTCARLFKSEVQFGHAGA 276 Query: 260 VISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 G A+ K A++EAG + S + ++ E L Sbjct: 277 KSGGELESAQAKNQALQEAGAAVPTSYEALEAAIKETFDKL 317 >gi|255556390|ref|XP_002519229.1| ATP-citrate synthase, putative [Ricinus communis] gi|223541544|gb|EEF43093.1| ATP-citrate synthase, putative [Ricinus communis] Length = 588 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 16/203 (7%) Query: 95 IPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI------- 147 I ++ I EG+P D ++ A ++ +IGP G + + KIG G+I Sbjct: 104 IRVVAIIAEGVPESDTKQLIAYARANNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIACK 163 Query: 148 -FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 +R GSVG +S+SG ++ E ++ G + IGGD G+ D + F Sbjct: 164 LYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQV 223 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVIS 262 + IV++GE+GG E + L K+G+ KP+V +V+G A ++ GHAGA Sbjct: 224 KMIVVLGELGGRDEYSLVEAL----KQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSG 279 Query: 263 GGKGGAEDKINAMKEAGICIAPS 285 G A+ K A+K+AG + S Sbjct: 280 GEMESAQAKNQALKDAGAVVPTS 302 >gi|224101561|ref|XP_002312331.1| predicted protein [Populus trichocarpa] gi|222852151|gb|EEE89698.1| predicted protein [Populus trichocarpa] Length = 608 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 16/203 (7%) Query: 95 IPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI------- 147 + ++ I EG+P D ++ A ++ +IGP G + + KIG G+I Sbjct: 104 VRVVAIIAEGVPEADAKQLIAYARANNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIACK 163 Query: 148 -FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 +R GSVG +S+SG ++ E ++ G + IGGD G+ D + F Sbjct: 164 LYRPGSVGFVSKSGGMSNELYNSIARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQV 223 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVIS 262 + IV++GE+GG E + L K+G+ KP+V +V+G A ++ GHAGA Sbjct: 224 KMIVVLGELGGRDEYSLVEAL----KQGKVSKPVVAWVSGTCARLFKSEVQFGHAGAKSG 279 Query: 263 GGKGGAEDKINAMKEAGICIAPS 285 G A+ K A+K+AG + S Sbjct: 280 GEMESAQAKNQALKDAGAVVPTS 302 >gi|224285717|gb|ACN40574.1| unknown [Picea sitchensis] Length = 608 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 18/246 (7%) Query: 54 VNVPVFTTV-AEAKERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMV 111 + +PV + + A K A+ + + A + + ++ + I ++ I EG+P D Sbjct: 61 IAIPVHSAIEAACKAHPTADVFINFASYRSAFASSMSALKQPTIRVVAIIAEGVPEGDTK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI--------FRKGSVGILSRSGTLT 163 ++ A ++ +IGP G + + KIG G+I +R GSVG +S+SG ++ Sbjct: 121 QLIAYARANNKVIIGPATVGGIQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E ++ G + IGGD G+ D + F + +V++GE+GG E Sbjct: 181 NELYNTVARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQVKMMVVLGELGGRDEYSL 240 Query: 224 AQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAG 279 + L K+G+ +KP+V +V+G A ++ GHAGA G A+ K A++EAG Sbjct: 241 VEAL----KQGKVQKPVVAWVSGTCARLFKSEVQFGHAGAKSGGELESAQGKNQALREAG 296 Query: 280 ICIAPS 285 + S Sbjct: 297 AVVPTS 302 >gi|313227556|emb|CBY22703.1| unnamed protein product [Oikopleura dioica] Length = 899 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 14/212 (6%) Query: 93 AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMP 144 ++I I I EGIP + + +IGP G + P KIG I+ Sbjct: 555 SQIRTIATIAEGIPENKTKLLNKMAHERGVTIIGPATVGGIKPGCFKIGNTGGMLDNILD 614 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 ++R GSV +SRSG ++ E S+ G IGGD G+ F D L + + Sbjct: 615 SKLYRPGSVAYVSRSGGMSNELNNIISRNTNGVFEGCAIGGDRYPGSNFYDHLIRYHNNP 674 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVI 261 E +V++GEIGG E E +K + KP+V + G A GHAGA Sbjct: 675 KVELLVLLGEIGGLEEYE---IIKAKENGLITKPVVAWCIGTCAKLFGSDVQFGHAGASA 731 Query: 262 SGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 + A K A++EAG + S +G ++ Sbjct: 732 NANAETAVAKNEALREAGFVVPTSFDGLGDAI 763 >gi|225431960|ref|XP_002278181.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296083242|emb|CBI22878.3| unnamed protein product [Vitis vinifera] Length = 608 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 16/203 (7%) Query: 95 IPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI------- 147 I ++ I EG+P D ++ A ++ +IGP G + + KIG G+I Sbjct: 104 IRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIQSK 163 Query: 148 -FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 +R GSVG +S+SG ++ E ++ G + IGGD G+ D + F Sbjct: 164 LYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQV 223 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVIS 262 + +V++GE+GG E + L K+G+ KP+V +V+G A ++ GHAGA Sbjct: 224 KMVVVLGELGGRDEYSLVEAL----KQGKINKPVVAWVSGTCARLFKSEVQFGHAGAKSG 279 Query: 263 GGKGGAEDKINAMKEAGICIAPS 285 G A+ K A+ EAG + S Sbjct: 280 GEMESAQAKNQALSEAGAVVPTS 302 >gi|297833436|ref|XP_002884600.1| ATP-citrate lyase B-1 [Arabidopsis lyrata subsp. lyrata] gi|297330440|gb|EFH60859.1| ATP-citrate lyase B-1 [Arabidopsis lyrata subsp. lyrata] Length = 608 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 16/218 (7%) Query: 95 IPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI------- 147 I ++ I EG+P D ++ A ++ +IGP G + + KIG G+I Sbjct: 104 IKVVAIIAEGVPESDTKQLIAYARANNKVIIGPATVGGVQAGAFKIGDTAGTIDNIIQCK 163 Query: 148 -FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 +R GSVG +S+SG ++ E ++ G + IGGD G+ D + F Sbjct: 164 LYRPGSVGFVSKSGGMSNEMYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQI 223 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVIS 262 + +V++GE+GG E L + K+G+ KP+V +V+G A ++ GHAGA Sbjct: 224 KMVVVLGELGGRDEYS----LVEAMKQGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSG 279 Query: 263 GGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 G A+ K A+K+AG + S + ++ E L Sbjct: 280 GEMESAQAKNQALKDAGATVPTSFEALESAIKETFDKL 317 >gi|301093042|ref|XP_002997370.1| ATP-citrate synthase [Phytophthora infestans T30-4] gi|262110768|gb|EEY68820.1| ATP-citrate synthase [Phytophthora infestans T30-4] Length = 1091 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 23/281 (8%) Query: 3 ILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGSTY----WTGGNVNV 56 + ++ NT+ +V GL +A G + V I P + Y W + Sbjct: 483 VRMNDNTRCIVYGLQQRAVQGMLDFDYLCKRKTPSVAALIFPFSPNHYLKFYWGTSERLI 542 Query: 57 PVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIEAEIPL--IVCITEGIPVLDMVRV 113 PVF +++A ++ + +I + + +E E L I EG+P + Sbjct: 543 PVFQKLSDAVKKFPDVSVLINFSSFRSVYQSTMEGFEHSDSLKTHAIIAEGVPEQQSRLI 602 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + + + +IGP G + P +IG I+ ++R GSV +S+SG ++ E Sbjct: 603 SKKARELNVGIIGPATVGGIKPGCLRIGNTGGMLDNIVQSKLYRPGSVAYVSKSGGMSNE 662 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 SQ G V IGGD G+ FI L + A+ + +V++GE+GG+ E + Sbjct: 663 LNNIVSQTTDGVYEGVAIGGDKYPGSTFIQHLLRYEANPDVKMMVLLGEVGGTDEFAVCR 722 Query: 226 FLKDEAKRGRKKPIVGFVAG---KTAPPGRTMGHAGAVISG 263 ++ A KKP+V + G K P GHAGA +G Sbjct: 723 AIQSGAI---KKPVVAWCIGTCAKIFPFEVQFGHAGACATG 760 >gi|115436118|ref|NP_001042817.1| Os01g0300200 [Oryza sativa Japonica Group] gi|14495217|dbj|BAB60936.1| putative ATP citrate lyase a-subunit [Oryza sativa Japonica Group] gi|15623805|dbj|BAB67865.1| putative ATP citrate lyase a-subunit [Oryza sativa Japonica Group] gi|113532348|dbj|BAF04731.1| Os01g0300200 [Oryza sativa Japonica Group] gi|125525538|gb|EAY73652.1| hypothetical protein OsI_01541 [Oryza sativa Indica Group] gi|125570053|gb|EAZ11568.1| hypothetical protein OsJ_01435 [Oryza sativa Japonica Group] Length = 608 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 16/218 (7%) Query: 95 IPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI------- 147 I ++ I EG+P D ++ + ++ +IGP G + + KIG G+I Sbjct: 104 IRVVAIIAEGVPESDTKQLISYARANNKVIIGPATVGGIQAGAFKIGDTAGTIDNIIQCK 163 Query: 148 -FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 +R GSVG +S+SG ++ E ++ G + IGGD G+ D + F Sbjct: 164 LYRPGSVGFVSKSGGMSNEMYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQV 223 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVIS 262 + +V++GE+GG E + L K+G+ +KP+V +V+G A ++ GHAGA Sbjct: 224 KMMVVLGELGGKDEYSLVEAL----KQGKVQKPVVAWVSGTCARLFKSEVQFGHAGAKSG 279 Query: 263 GGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 G A+ K A+K+AG + S + ++ E L Sbjct: 280 GELESAQAKNQALKDAGAVVPTSYEALETAIKETFEKL 317 >gi|2695651|gb|AAB94001.1| succinyl-CoA synthetase [Sus scrofa] Length = 81 Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 30/44 (68%), Positives = 37/44 (84%), Gaps = 1/44 (2%) Query: 91 IEAEIPLIVCITEGIPVLDMVRVKAR-LEKSSSRLIGPNCPGIL 133 I+AE+PL+VCITEGIP DMVRVK R L + +RLIGPNCPG++ Sbjct: 1 IDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRLIGPNCPGVI 44 >gi|15230764|ref|NP_187317.1| ACLB-1; ATP citrate synthase [Arabidopsis thaliana] gi|12321918|gb|AAG50997.1|AC036106_10 ATP citrate lyase, putative; 38389-41775 [Arabidopsis thaliana] gi|12322674|gb|AAG51326.1|AC020580_6 ATP citrate lyase, putative; 3734-7120 [Arabidopsis thaliana] gi|27754223|gb|AAO22565.1| putative ATP citrate lyase [Arabidopsis thaliana] gi|332640905|gb|AEE74426.1| ATP-citrate lyase B-1 [Arabidopsis thaliana] Length = 608 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 16/203 (7%) Query: 95 IPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI------- 147 I ++ I EG+P D ++ A ++ +IGP G + + KIG G+I Sbjct: 104 IKVVAIIAEGVPESDTKQLIAYARANNKVIIGPATVGGVQAGAFKIGDTAGTIDNIIQCK 163 Query: 148 -FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 +R GSVG +S+SG ++ E ++ G + IGGD G+ D + F Sbjct: 164 LYRPGSVGFVSKSGGMSNEMYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQI 223 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVIS 262 + +V++GE+GG E L + K+G+ KP+V +V+G A ++ GHAGA Sbjct: 224 KMVVVLGELGGRDEYS----LVEAMKQGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSG 279 Query: 263 GGKGGAEDKINAMKEAGICIAPS 285 G A+ K A+++AG + S Sbjct: 280 GEMESAQAKNQALQDAGATVPTS 302 >gi|224108730|ref|XP_002314948.1| predicted protein [Populus trichocarpa] gi|222863988|gb|EEF01119.1| predicted protein [Populus trichocarpa] Length = 616 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 16/203 (7%) Query: 95 IPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI------- 147 + ++ I EG+P D ++ A ++ +IGP G + + KIG G+I Sbjct: 104 VRVVAIIAEGVPEADTKQLIAYARANNKVVIGPATVGGIQAGAFKIGETAGTIDNIIACK 163 Query: 148 -FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 +R GSVG +S+SG ++ E ++ G + IGGD G+ D + F Sbjct: 164 LYRSGSVGFVSKSGGMSNELYNAIARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQV 223 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVIS 262 + +V++GE+GG E + L K+G+ KP+V +V+G A ++ GHAGA Sbjct: 224 KIMVVLGELGGRDEYSLVEAL----KQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSG 279 Query: 263 GGKGGAEDKINAMKEAGICIAPS 285 G A+ K A+K+AG + S Sbjct: 280 GEMESAQAKNQAIKDAGAVVPTS 302 >gi|148872938|gb|ABR15094.1| ATP citrate lyase alpha subunit [Glycyrrhiza uralensis] Length = 608 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 16/203 (7%) Query: 95 IPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI------- 147 I ++ I EG+P D ++ A ++ +IGP G + + KIG G+I Sbjct: 104 IRVVAIIAEGVPESDTKQLIAYARANNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCK 163 Query: 148 -FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 +R GSVG +S+SG ++ E ++ G + IGGD G+ D + F Sbjct: 164 LYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQV 223 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVIS 262 + +V++GE+GG E + L K+G+ KP+V +V+G A ++ GHAGA Sbjct: 224 KMMVVLGELGGRDEYSLVEAL----KQGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSG 279 Query: 263 GGKGGAEDKINAMKEAGICIAPS 285 G A+ K A+ EAG + S Sbjct: 280 GEMESAQAKNQALSEAGAVVPTS 302 >gi|311334532|emb|CBN08647.1| succinate-CoA ligase, alpha subunit [Microcosmus squamiger] Length = 70 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/65 (55%), Positives = 49/65 (75%), Gaps = 5/65 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T ++++PVF Sbjct: 7 MSVLINKDTKVLVQGFTGKNGTFHSAQALDYG-TKVVGGVTPGKGGTT----HLDLPVFN 61 Query: 61 TVAEA 65 T+ EA Sbjct: 62 TMKEA 66 >gi|225571894|ref|ZP_03780764.1| hypothetical protein CLOHYLEM_07868 [Clostridium hylemonae DSM 15053] gi|225159451|gb|EEG72070.1| hypothetical protein CLOHYLEM_07868 [Clostridium hylemonae DSM 15053] Length = 109 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 6/114 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D++T +L+ G+TGK G H ++ L + +++ G+ P KG G VPVF Sbjct: 1 MSILIDQDTAMLIIGITGKQGRIHCKRT-LESKARLLAGVAPGKGGQSVEG----VPVFE 55 Query: 61 TVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV 113 TVA+A+ A+++ VP DA ++++ I L+ ITE +PV+D +++ Sbjct: 56 TVADARAVFPEIRAAMLLVPKQFVRDAAFQALDEGIRLLAVITEFVPVMDALQI 109 >gi|94502316|ref|ZP_01308792.1| succinyl-CoA synthase alpha subunit [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|94451131|gb|EAT14080.1| succinyl-CoA synthase alpha subunit [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] Length = 68 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 46/63 (73%) Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 +KKP++GF+AG+TAP GRTMGHAGA++ A KIN +K+ GI I SP++IG + Sbjct: 5 KKKPVLGFIAGQTAPKGRTMGHAGAIVGEKNDTAIYKINMLKKCGIKIIKSPSQIGDEVF 64 Query: 295 ELL 297 ++L Sbjct: 65 KIL 67 >gi|297792199|ref|XP_002863984.1| ATP-citrate lyase B-2 [Arabidopsis lyrata subsp. lyrata] gi|297309819|gb|EFH40243.1| ATP-citrate lyase B-2 [Arabidopsis lyrata subsp. lyrata] Length = 608 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 16/203 (7%) Query: 95 IPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI------- 147 I ++ I EG+P D + A ++ +IGP G + + KIG G+I Sbjct: 104 IKVVAIIAEGVPESDTKHLIAYARANNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIQCK 163 Query: 148 -FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 +R GSVG +S+SG ++ E ++ G + IGGD G+ D + F Sbjct: 164 LYRPGSVGFVSKSGGMSNEMYNTVARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQI 223 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVIS 262 + +V++GE+GG E + LK+ G+ KP+V +V+G A ++ GHAGA Sbjct: 224 KMMVVLGELGGRDEYSLVEALKE----GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSG 279 Query: 263 GGKGGAEDKINAMKEAGICIAPS 285 G A+ K A+ +AG + S Sbjct: 280 GEMESAQAKNQALMDAGAIVPTS 302 >gi|313681795|ref|YP_004059533.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfuricurvum kujiense DSM 16994] gi|313154655|gb|ADR33333.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfuricurvum kujiense DSM 16994] Length = 605 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 77/263 (29%), Positives = 118/263 (44%), Gaps = 21/263 (7%) Query: 54 VNVPVFTTVAEAKERTAANASVI--YVPPSGAGDAIIESI--EAEIPLIVCITEGIPVLD 109 + VPVF +A NA V+ + A D +E+I + + I+ EGIP Sbjct: 60 IMVPVFRNTTDAAA-AFPNADVLLNFASFRTAYDVTMEAIAIKGQFKTIMVTAEGIPERL 118 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKI--------GIMPGSIFRKGSVGILSRSGT 161 ++ + + +IGP G + P KI I+ + R GS G+++RSG Sbjct: 119 ARKMNQQARDAGVIVIGPATVGGIAPGGFKIANVGGTIENIINSKLHRAGSCGLVTRSGG 178 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 L E S G + V IGGD G+ FID L ++ + +V++GE+GG+ E Sbjct: 179 LFNELSNIISINADGIAEGVAIGGDRFVGSVFIDNLLRMESNPEVKYMVLLGEVGGTEEY 238 Query: 222 EAAQFLKDEAKRGR-KKPIVGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKE 277 + + K G+ KKPI+ + G K G GHAGA + A K AM Sbjct: 239 KVIE----AVKAGKIKKPIIAWCIGTIAKHFSSGVQFGHAGASANADAETAAAKNEAMAA 294 Query: 278 AGICIAPSPARIGRSLVELLGSL 300 AGI + S + ++ E+ G L Sbjct: 295 AGIHVPASFNDLPHTIAEVYGKL 317 >gi|15239897|ref|NP_199757.1| ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2); ATP citrate synthase [Arabidopsis thaliana] gi|9759429|dbj|BAB09916.1| ATP citrate lyase [Arabidopsis thaliana] gi|14334788|gb|AAK59572.1| putative ATP citrate lyase [Arabidopsis thaliana] gi|16648644|gb|AAL25638.1| ATP-citrate lyase subunit B [Arabidopsis thaliana] gi|17065616|gb|AAL33788.1| putative ATP citrate lyase [Arabidopsis thaliana] gi|332008431|gb|AED95814.1| ATP citrate lyase subunit B 2 [Arabidopsis thaliana] Length = 608 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%) Query: 95 IPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI------- 147 I ++ I EG+P D ++ A ++ +IGP G + + KIG G+I Sbjct: 104 IKVVAIIAEGVPESDTKQLIAYARANNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIQCK 163 Query: 148 -FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 +R GSVG +S+SG ++ E ++ G + IGGD G+ D + F Sbjct: 164 LYRPGSVGFVSKSGGMSNEMYNTVARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQI 223 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVIS 262 + +V++GE+GG E + LK+ G+ KP+V +V+G A ++ GHAGA Sbjct: 224 KMMVVLGELGGRDEYSLVEALKE----GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSG 279 Query: 263 GGKGGAEDKINAMKEAGICIAPS 285 G A+ K A+ +AG + S Sbjct: 280 GEMESAQAKNQALIDAGAIVPTS 302 >gi|256072375|ref|XP_002572511.1| ATP-citrate synthase [Schistosoma mansoni] gi|238657671|emb|CAZ28743.1| ATP-citrate synthase, putative [Schistosoma mansoni] Length = 1164 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 96/222 (43%), Gaps = 32/222 (14%) Query: 92 EAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IM 143 EA+I I I EGIP R+ R + + LIGP G L KIG I+ Sbjct: 637 EAQIKCIAIIAEGIPENMTRRLIQRSRERNILLIGPATVGGLKSGCFKIGNTGGMTDNIL 696 Query: 144 PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLAD 203 ++R GSV +SRSG ++ E S G V IGGD G+ FID + + + Sbjct: 697 ASKLYRPGSVAYVSRSGGMSNELNNIISMNSDGVYEGVAIGGDRFPGSTFIDHILRYENN 756 Query: 204 EATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT--------- 253 IV++GE+GG EE A + + K G+ KKPIV + G + Sbjct: 757 PEIGMIVVLGEVGG-VEEYA---IIEAVKSGKIKKPIVAWCIGSCGELLSSAANSNNNTD 812 Query: 254 ----------MGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 GHAGA + + A K +A+ GI + S Sbjct: 813 SNNITGGSIQFGHAGACANSLQETATAKNHALASVGIHVPES 854 >gi|288225756|gb|ADC44446.1| ATP citrate lyase [Felis catus] Length = 186 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 16/179 (8%) Query: 93 AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMP 144 ++I I I EGIP ++ + ++ +IGP G + P KIG I+ Sbjct: 2 SQIRTIAIIAEGIPEALTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILA 61 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 ++R GSV +SRSG ++ E S+ G V IGGD G+ F+D + + Sbjct: 62 SKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTP 121 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGA 259 + IV++GEIGG+ E + + +K+ GR KP+V + G A + GHAGA Sbjct: 122 GVKMIVVLGEIGGTEEYKICRGIKE----GRITKPVVCWCIGTCATMFSSEVQFGHAGA 176 >gi|70937520|ref|XP_739556.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56516643|emb|CAH79470.1| hypothetical protein PC000316.03.0 [Plasmodium chabaudi chabaudi] Length = 79 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 29/62 (46%), Positives = 44/62 (70%) Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I F+AG+ APPG+ MGHAGA+ISGGKG A+ KI A++ AG+ + +P +IG + ++ Sbjct: 17 IFAFIAGRCAPPGKRMGHAGALISGGKGTADGKIEALRNAGVHVVINPTKIGEEIYSVMK 76 Query: 299 SL 300 + Sbjct: 77 DI 78 >gi|307107150|gb|EFN55394.1| hypothetical protein CHLNCDRAFT_31334 [Chlorella variabilis] Length = 590 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 70/249 (28%), Positives = 116/249 (46%), Gaps = 27/249 (10%) Query: 54 VNVPVFTTVAEAKERT-AANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMV 111 + +P+ ++AEA E A+ V + A ++ +E++ +A I ++ I EG+P D Sbjct: 37 IAIPMVGSIAEAAEAFPKADVLVNFSSYRSAFESSMEALRQATIRVVAIIAEGVPERDAK 96 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLT 163 + A ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ Sbjct: 97 AMIAYARDNNKIIIGPATVGGVQAGAFKIGDAAGTLDNILACKLYRPGSVGFVSKSGGMS 156 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E ++ G + IGGD G+ D + + IV++GEIGG E Sbjct: 157 NEMYNVIARAADGVYEGIAIGGDAFPGSTLSDHCLRYQNIPQIKMIVVLGEIGGQDEYSL 216 Query: 224 AQFLKDEAKRGR-KKPIVGF-----VAGKTAPPGRT---MGHAGAVISGGKGGAEDKINA 274 + L K GR KP+V + V G A ++ GHAGA GG E++ + Sbjct: 217 VEAL----KAGRITKPVVAWARQAAVVGTCAKLFKSEVQFGHAGA----KSGGDEERASP 268 Query: 275 MKEAGICIA 283 K A + A Sbjct: 269 AKNAALSAA 277 >gi|295676331|ref|YP_003604855.1| CoA-binding domain protein [Burkholderia sp. CCGE1002] gi|295436174|gb|ADG15344.1| CoA-binding domain protein [Burkholderia sp. CCGE1002] Length = 899 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 72/260 (27%), Positives = 106/260 (40%), Gaps = 29/260 (11%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 ++ + + +V V + G + T + + VV G P KG ++PV+ Sbjct: 18 LAHIATREDRVCVLNILGGESSEVTPVSHAFSGANVVFGTAPGKGGQVLATPAGDIPVYN 77 Query: 61 TVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPL--IVCITEGIPVLDMVRVKARL 117 V E E N V+Y+PPS A D + E I L I ITE I V D ++A Sbjct: 78 NVREGLEAGHRFNCGVVYLPPSAARDGVAELIRVNPDLRKIFIITEKISVHDAREIRAMG 137 Query: 118 EKSSSRLIGPNCPGILTPDSCKI--------GIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 +++ + G N G+ DS + G PG+ R+GS+ I S SG + Sbjct: 138 QQAGIDIFGAN--GLGVADSWQRVRIGGALGGDDPGATLRQGSIAIFSNSGGFSTTIAQY 195 Query: 170 TSQEGLGQSTAVGIGGD---PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 G G ST V G D EF L D +++ V+ E GG E +AA Sbjct: 196 LRMSGWGTSTVVSSGKDVYIHYAAPEFAFALA---NDARSKAAVLYCEPGGYYEADAA-- 250 Query: 227 LKDEAKRGRKKPIVGFVAGK 246 KP+V V G+ Sbjct: 251 --------FTKPVVACVVGR 262 >gi|289705454|ref|ZP_06501848.1| CoA binding domain protein [Micrococcus luteus SK58] gi|289557839|gb|EFD51136.1| CoA binding domain protein [Micrococcus luteus SK58] Length = 100 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 6/83 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT + +L T +VGG++ +K T + G V Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHT-RLMLKAGTNIVGGVNARKAGTTVSHEDKDGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYV 78 +PVF TV EA E+T A+ SV +V Sbjct: 60 LPVFGTVKEAMEKTGADVSVAFV 82 >gi|13924578|gb|AAK49060.1|AF258268_1 succinyl-CoA-ligase alpha subunit [Brassica napus] Length = 46 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/46 (67%), Positives = 33/46 (71%) Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 EAVFQTS GLGQST VGIGGDP GT F+D L+ F D TE IV Sbjct: 1 EAVFQTSAVGLGQSTCVGIGGDPFNGTNFVDCLDKFFVDPQTEGIV 46 >gi|51244510|ref|YP_064394.1| acetyl-CoA synthetase [Desulfotalea psychrophila LSv54] gi|50875547|emb|CAG35387.1| probable acetyl-CoA synthetase [Desulfotalea psychrophila LSv54] Length = 701 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 21/214 (9%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP-------VL 108 +PV+T++ E KE + + ++I V D + +++ IV I G +L Sbjct: 53 LPVYTSLKEYKE--SLDMAIIAVNKDLIIDVVQDALSKRCTTIVAIGAGFKESGDEGAML 110 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + V ++S +RL+GPNC G + + G + RKG + I S+SG L + Sbjct: 111 EQ-EVLTLCKRSGARLLGPNCLGFINTELKINASFAGPMPRKGGISIFSQSGALATAMLD 169 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE--EAAQF 226 Q Q GLG S + + G+ TE D+L F AD +T+ + G E F Sbjct: 170 QAEQRGLGVSKLISV-GNKADITEN-DLLSYFAADSSTKV------VAGYLENIVNGNNF 221 Query: 227 LKDEAKRGRKKPIVGFVAGKT-APPGRTMGHAGA 259 LK RKKP++ +G + A H GA Sbjct: 222 LKHATHISRKKPVILLKSGTSEAGQKSATSHTGA 255 >gi|220922715|ref|YP_002498017.1| CoA-binding domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219947322|gb|ACL57714.1| CoA-binding domain protein [Methylobacterium nodulans ORS 2060] Length = 902 Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 116/293 (39%), Gaps = 20/293 (6%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 + + +V V + G + T Y VV G P + +PV+ V Sbjct: 21 IATREDRVCVLNILGGESSDVTPVGHAYSGGNVVFGTSPGRRGQGLETPLGEIPVYNNVR 80 Query: 64 EAKERTAA-NASVIYVPPSGAGDAIIESIEAEIPL--IVCITEGIPVLDMVRVKARLEKS 120 E E N V+Y+PP+GA D + E I L I +TE + V D ++A +++ Sbjct: 81 EGLEAGHRFNCGVVYLPPAGARDGVAELIRVNPDLRKIFIVTEKLSVHDSREIRALGQQN 140 Query: 121 SSRLIGPNCPGILTP-DSCKIG-----IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + G N G+ +IG PG + GS+ I S SG T G Sbjct: 141 GVDIFGGNSLGVADAYHQVRIGGALGGDSPGEALKPGSIAIFSNSGNFTTTIATYLRMSG 200 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 G +T + G D + D +++ V+ E GG E + A F Sbjct: 201 WGTTTLISSGKDVYIQYAAPEFAFALANDARSKAAVLYVEPGGYYERD-AHF-------- 251 Query: 235 RKKPIVGFVAGK-TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 KP+V V G+ + R +GHAGA+ G A + +++ G+ +P Sbjct: 252 -TKPVVACVVGRWKSRLTRAVGHAGAMAGGDDDAAAKERWFLEKFGVASVFTP 303 >gi|158520179|ref|YP_001528049.1| CoA-binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158509005|gb|ABW65972.1| CoA-binding domain protein [Desulfococcus oleovorans Hxd3] Length = 516 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 27/231 (11%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 ++PK+ S + VP F +V + ++ + +VI VP +G D I + ++ I V Sbjct: 61 VNPKEASVH------GVPAFASVKDIQDEI--DLAVIIVPAAGVPDIISDCVDKGIGAAV 112 Query: 100 CITEGIPVL---------DMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 IT G L +M+R R L+GPN GI P+S P Sbjct: 113 VITSGFGELGEEGKGLQNEMLR---RARAGGMVLVGPNGQGIAAPESKFYPWFPTFRPDP 169 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G +GI S+SG ++ E Q ++ G G S + G + D L F D +T+ ++ Sbjct: 170 GVIGIASQSGGISTELSEQLAEFGFGCSKVISTGN--CADLSWPDYLAYFRQDPSTKVVL 227 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAV 260 + E ++ F ++ K +KP++ +G+T GR H G++ Sbjct: 228 LYME----GAQDGRAFFREAKKTALEKPVILIKSGRTQEGGRAASSHTGSM 274 >gi|290559309|gb|EFD92645.1| CoA-binding domain protein [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 683 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 31/244 (12%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL--DMVR---- 112 F +VA K++ + +VI VP + + E + +IPL V ++ G + D + Sbjct: 56 FKSVASVKKKI--DIAVIAVPAEMVLNILKECEKVKIPLAVILSAGFNEIGGDGTKKEEA 113 Query: 113 VKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 +K L K+ R+IGPNC GI+ P+ + P S KG+ +S+SG L V Sbjct: 114 IKKFLSKAKIRIIGPNCLGIINTDPNFNATFLDPNSKVIKGNASFISQSGALLSAIVDDA 173 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 S +G S + IG D++E F DE T+ + + E + FLK Sbjct: 174 STNDIGFSKIISIGN--ATDISEADIIEAFKTDEKTKVLALYLE----GLNNGSDFLKAS 227 Query: 231 AKRGRKKPIVGFVAGK-TAPPGRTMGHAGAV--------ISGGKGGA------EDKINAM 275 + R+KP++ GK + G H G++ ++ + GA +D N M Sbjct: 228 MEFSREKPLLILKGGKFKSTSGAVSSHTGSMAGDYKAYELAFERAGAISVDNIDDLFNFM 287 Query: 276 KEAG 279 ++A Sbjct: 288 RDAA 291 >gi|196020151|ref|XP_002119096.1| hypothetical protein TRIADDRAFT_35141 [Trichoplax adhaerens] gi|190576980|gb|EDV18419.1| hypothetical protein TRIADDRAFT_35141 [Trichoplax adhaerens] Length = 62 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 5/65 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+ TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG + G +PVF Sbjct: 1 MSVLVNSQTKVICQGFTGAQGTFHSEQAIQY-GTKMVGGVTPGKGGSTHLG----LPVFN 55 Query: 61 TVAEA 65 TV EA Sbjct: 56 TVEEA 60 >gi|183180812|gb|ACC44673.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180820|gb|ACC44677.1| Cre-D1005.1 [Caenorhabditis remanei] Length = 238 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 6/162 (3%) Query: 142 IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFL 201 I+ ++R GSV +SRSG ++ E SQ G + IGGD G+ + D + + Sbjct: 12 ILASKLYRPGSVAYVSRSGGMSNELNNIISQNTNGVYEGIAIGGDRYPGSTYTDHVIRYQ 71 Query: 202 ADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAG 258 D+ + IV++GE+GG E + + LK ++ KP+V + G A + GHAG Sbjct: 72 NDDRVKMIVLLGEVGGVEEYKIVELLK---QKKVTKPLVAWCIGTCADHITSEVQFGHAG 128 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 A + A K A++ +G + S +G + + L Sbjct: 129 ASANALGETAACKNAALRASGALVPESFDDLGNKIRQTYDEL 170 >gi|320354216|ref|YP_004195555.1| CoA-binding domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320122718|gb|ADW18264.1| CoA-binding domain protein [Desulfobulbus propionicus DSM 2032] Length = 889 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 11/173 (6%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 E S R+IGPNC G++ P+ G + KGS+ ++S+SG + + + ++E +G Sbjct: 118 EGSGMRIIGPNCMGVIRPNKNLNATFAGGMPAKGSLAVISQSGAICAAILDRAAEEHMGF 177 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V IG + +F D+++ D + ++I++ E + +F+ R K Sbjct: 178 SHFVSIGS--MLDVDFGDMIDYLGNDGSVKAILLYMENLTNPR----KFMSAARSVSRIK 231 Query: 238 PIVGFVAGKTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 PI+ AGK+ R H GA+ G+ D A K AGI PS AR+ Sbjct: 232 PIIVLKAGKSQAGARAASTHIGAM--AGEDAVYDA--AFKRAGIVRVPSLARL 280 >gi|183180836|gb|ACC44685.1| Cre-D1005.1 [Caenorhabditis remanei] Length = 238 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 6/162 (3%) Query: 142 IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFL 201 I+ ++R GSV +SRSG ++ E SQ G + IGGD G+ + D + + Sbjct: 12 ILSSKLYRPGSVAYVSRSGGMSNELNNIISQNTNGVYEGIAIGGDRYPGSTYTDHVIRYQ 71 Query: 202 ADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAG 258 D+ + IV++GE+GG E + LK ++ KP+V + G A + GHAG Sbjct: 72 NDDRVKMIVLLGEVGGVEEYKIVDLLK---QKKVTKPLVAWCIGTCADHITSEVQFGHAG 128 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 A + A K A++ +G + S +G + + L Sbjct: 129 ASANALGETAACKNAALRASGALVPESFDDLGNKIRQTYDEL 170 >gi|183180814|gb|ACC44674.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180816|gb|ACC44675.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180818|gb|ACC44676.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180822|gb|ACC44678.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180824|gb|ACC44679.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180826|gb|ACC44680.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180828|gb|ACC44681.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180830|gb|ACC44682.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180832|gb|ACC44683.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180834|gb|ACC44684.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180838|gb|ACC44686.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180840|gb|ACC44687.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180842|gb|ACC44688.1| Cre-D1005.1 [Caenorhabditis remanei] Length = 238 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 6/162 (3%) Query: 142 IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFL 201 I+ ++R GSV +SRSG ++ E SQ G + IGGD G+ + D + + Sbjct: 12 ILASKLYRPGSVAYVSRSGGMSNELNNIISQNTNGVYEGIAIGGDRYPGSTYTDHVIRYQ 71 Query: 202 ADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---MGHAG 258 D+ + IV++GE+GG E + LK ++ KP+V + G A + GHAG Sbjct: 72 NDDRVKMIVLLGEVGGVEEYKIVDLLK---QKKVTKPLVAWCIGTCADHITSEVQFGHAG 128 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 A + A K A++ +G + S +G + + L Sbjct: 129 ASANALGETAACKNAALRASGALVPESFDDLGNKIRQTYDEL 170 >gi|315231078|ref|YP_004071514.1| acetyl-CoA synthetase subunit alpha [Thermococcus barophilus MP] gi|315184106|gb|ADT84291.1| acetyl-CoA synthetase (ADP-forming) alpha chain [Thermococcus barophilus MP] Length = 454 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 26/223 (11%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---------PVLDMVRVKARLEKSSS 122 + +VI VP +I+ E + IV IT G ++V + K Sbjct: 67 DLAVIVVPKRFVKQTVIDCGEKGVKGIVLITAGFGETGEEGKREEKELVEIA---HKYGM 123 Query: 123 RLIGPNCPGILTP--DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNC GI+ D IM ++G + +S+SG L V++T +EG+G S Sbjct: 124 RIIGPNCVGIMNTHNDMNATFIMDA---KRGDIAFVSQSGALGAGIVYKTVKEGIGFSKF 180 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 + IG + +F +++E DE +++I + E ++ +F++ K +KKP++ Sbjct: 181 ISIGN--MADVDFSELMEYLADDEESKAIALYIE----GVKDGRKFMEAAKKVTKKKPVI 234 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 AGK+ R ++G E A K+ GI +A Sbjct: 235 VLKAGKSESGARAASSHTGSLAGSYKIYE---AAFKQTGILVA 274 >gi|323097753|emb|CBJ18438.1| ATP citrate lyase [uncultured bacterium] Length = 256 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 12/124 (9%) Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPI 239 + IGGD G+ FID L A+ + ++++GE+GG+ E + + +KD GR KKPI Sbjct: 2 IAIGGDRFVGSVFIDNLLRMEANPEVKYMILLGEVGGTEEYKVIEAVKD----GRIKKPI 57 Query: 240 VGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS----PARIGRS 292 + + G K G GHAGA + AE K AM EAGI + S PA I + Sbjct: 58 IAWCIGTIAKYYDSGVQFGHAGASANADSETAEYKNRAMAEAGIHVPTSFNELPAMINKV 117 Query: 293 LVEL 296 +L Sbjct: 118 FTDL 121 >gi|312137221|ref|YP_004004558.1| acetyl coenzyme a synthetase (ADP forming), alpha domain protein [Methanothermus fervidus DSM 2088] gi|311224940|gb|ADP77796.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanothermus fervidus DSM 2088] Length = 694 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 78/162 (48%), Gaps = 18/162 (11%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPNC GI+ + SIF KG V I+S+SG + + +G S V Sbjct: 121 RIIGPNCLGIMNT-HLDLNATFASIFPPKGKVSIVSQSGAILDAILDIAPLLNIGFSKVV 179 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 IG + D+LE F+ D+ TE +V+ I G ++ +FLK K RKKPI+ Sbjct: 180 SIGNKV--DIQESDLLEYFIKDDDTEIVVLY--IEGLKDK---KFLKSAKKLSRKKPIIA 232 Query: 242 FVAGKTAPPGRTM-GHAGAVISGGKGGAEDKIN--AMKEAGI 280 +GKT + + H GA+ ED I KEAGI Sbjct: 233 LKSGKTEIGKKAVKSHTGAL------AGEDSIYEAVFKEAGI 268 >gi|242398140|ref|YP_002993564.1| Acetyl-CoA synthetase II (ACSII, ADP-forming), subunit alpha [Thermococcus sibiricus MM 739] gi|242264533|gb|ACS89215.1| Acetyl-CoA synthetase II (ACSII, ADP-forming), subunit alpha [Thermococcus sibiricus MM 739] Length = 457 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 16/171 (9%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIG--IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +K R+IGPNC G++ S IM +KGSV +S+SG L V++T +E + Sbjct: 121 QKYGIRIIGPNCVGVMDTHSNMNATFIMNA---KKGSVAFVSQSGALGAGIVYKTIKEDI 177 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S + +G + +F D++E D ++SI + E + +F++ K + Sbjct: 178 GFSKFISVGN--MADVDFADLMEYLAEDNNSKSIALYIE----GIKNGKKFMEIAKKVSK 231 Query: 236 KKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 KKPI+ AGK+ R H G++ G D A +++G+ +A + Sbjct: 232 KKPIIALKAGKSESGARAASSHTGSL--AGSYAIYDA--AFRQSGVLVAET 278 >gi|171318044|ref|ZP_02907215.1| CoA-binding domain protein [Burkholderia ambifaria MEX-5] gi|171096778|gb|EDT41656.1| CoA-binding domain protein [Burkholderia ambifaria MEX-5] Length = 730 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 10/127 (7%) Query: 123 RLIGPNCPGIL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG-LGQSTA 180 R+IGPN GI T + C + + S RKG++G+LS+SG + V + G +G ST Sbjct: 128 RIIGPNTSGIFNTHNQCNV--VGFSQLRKGAIGLLSQSGNMALSLVTEAQANGEVGLSTY 185 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIG + F + L+ F DE T ++ E ++ FLK RKKP+V Sbjct: 186 VGIGNE--SDIRFDEYLDYFADDENTSVVIAYVE----GMKDGPAFLKALRDITRKKPVV 239 Query: 241 GFVAGKT 247 + +G+T Sbjct: 240 LYKSGRT 246 >gi|167383747|ref|XP_001736656.1| hypothetical protein [Entamoeba dispar SAW760] gi|165900837|gb|EDR27069.1| hypothetical protein, conserved [Entamoeba dispar SAW760] Length = 713 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 15/155 (9%) Query: 111 VRVKARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + ++A +K + R+IGPNC GI+ P ++ +MP + G V +S+SG L Sbjct: 112 IEIQATCQKYNMRMIGPNCLGIINPRDGVNASFASVMPEA----GGVAFISQSGALCTAI 167 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + + +G S V IG T++ D+ E F D SI+M E + ++A +F Sbjct: 168 LDWAANQHVGFSYFVSIGSS--IDTDYADLFEFFAKDPKVTSILMYIE----SIKDAKKF 221 Query: 227 LKDEAKRGRKKPIVGFVAGKTAP-PGRTMGHAGAV 260 + + KPI+ AGK++ M H G++ Sbjct: 222 VLRAREFAADKPIILLKAGKSSEGAAAAMSHTGSL 256 >gi|67481881|ref|XP_656290.1| acetyl-CoA synthetase [Entamoeba histolytica HM-1:IMSS] gi|56473479|gb|EAL50904.1| acetyl-CoA synthetase, putative [Entamoeba histolytica HM-1:IMSS] Length = 713 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 15/155 (9%) Query: 111 VRVKARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + ++A +K + R+IGPNC GI+ P ++ +MP + G V +S+SG L Sbjct: 112 IEIQATCQKYNMRMIGPNCLGIINPRDGVNASFASVMPEA----GGVAFISQSGALCTAI 167 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + + +G S V IG T++ D+ E F D SI+M E + ++A +F Sbjct: 168 LDWAANQHVGFSYFVSIGSS--IDTDYADLFEFFAKDPKVTSILMYIE----SIKDAKKF 221 Query: 227 LKDEAKRGRKKPIVGFVAGKTAP-PGRTMGHAGAV 260 + + KPI+ AGK++ M H G++ Sbjct: 222 VLRAREFAADKPIILLKAGKSSEGAAAAMSHTGSL 256 >gi|254173847|ref|ZP_04880518.1| AcdA-3 acetate--coA ligase (ADP-forming) , alpha chain [Thermococcus sp. AM4] gi|214032096|gb|EEB72927.1| AcdA-3 acetate--coA ligase (ADP-forming) , alpha chain [Thermococcus sp. AM4] Length = 461 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 14/165 (8%) Query: 123 RLIGPNCPGILTP--DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNC G++ D IM +KGS+ +S+SG L V++T +EG+G S Sbjct: 127 RLIGPNCVGVMNTHNDMNATFIMDA---KKGSIAFVSQSGALGAGIVYKTVKEGIGFSKF 183 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 + +G + +F +++E E ++I + E ++ +F++ K RKKP++ Sbjct: 184 ISVGN--MADLDFAELMEYLADTEEDKAIALYIE----GIKDGRKFIEVAKKATRKKPVI 237 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 AGK+ R ++G E A K++G+ IA + Sbjct: 238 ALKAGKSESGARAASSHTGSLAGSWKIYE---AAFKQSGVLIAET 279 >gi|13924581|gb|AAK49061.1|AF258269_1 succinyl-CoA-ligase alpha subunit [Brassica napus] gi|13924586|gb|AAK49063.1|AF258271_1 succinyl-CoA-ligase alpha subunit [Brassica oleracea] Length = 43 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 30/43 (69%), Positives = 31/43 (72%) Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 EAVFQTS GLGQST VGIGGDP GT F+D LE F D TE Sbjct: 1 EAVFQTSAVGLGQSTCVGIGGDPFNGTNFVDCLEKFFVDPQTE 43 >gi|9502268|gb|AAF88064.1|AF286346_1 acetyl-CoA synthetase [Entamoeba histolytica] Length = 713 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 15/155 (9%) Query: 111 VRVKARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + ++A +K + R+IGPNC GI+ P ++ +MP + G V +S+SG L Sbjct: 112 IEIQATCQKYNMRMIGPNCLGIINPRDGVNASFASVMPEA----GGVAFISQSGALCTAI 167 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + + +G S V IG T++ D+ E F D SI+M E + ++A +F Sbjct: 168 LDWAANQHVGFSYFVSIGSS--IDTDYADLFEFFAKDPKVTSILMYIE----SIKDAKKF 221 Query: 227 LKDEAKRGRKKPIVGFVAGKTAP-PGRTMGHAGAV 260 + + KPI+ AGK++ M H G++ Sbjct: 222 VLRAREFAADKPIILLKAGKSSEGAAAAMSHTGSL 256 >gi|27381179|ref|NP_772708.1| hypothetical protein bll6068 [Bradyrhizobium japonicum USDA 110] gi|27354346|dbj|BAC51333.1| bll6068 [Bradyrhizobium japonicum USDA 110] Length = 897 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 19/174 (10%) Query: 113 VKARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 V A K RLIGPNC GI+ P ++ MPG+ G++ ++S+SG + V Sbjct: 115 VIAAARKYGMRLIGPNCLGIMMPGVSLNASFAAHMPGA----GNLALISQSGAIAAGMVD 170 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 +Q G+G S V I GD + + D+L+ F D T +I++ E A ++A +F+ Sbjct: 171 WAAQRGVGFSGIVSI-GDQID-VDIADLLDYFAMDHKTRAILLYIE----AIKDARKFMS 224 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGIC 281 R KP+V +G+ A + A A +G GA+ + A + AGI Sbjct: 225 AARAAARVKPVVVVKSGRMAQGAK----AAATHTGALAGADAVYDAAFRRAGIL 274 >gi|47204551|emb|CAF96059.1| unnamed protein product [Tetraodon nigroviridis] Length = 615 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 16/201 (7%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L K+TK +V G+ +A G + + V ++P K YW + Sbjct: 414 TTLFGKHTKSIVWGMQTRAVQGMLDFDYVCSRLEPSVAAMVYPFTGDHKQKFYWGHKEIL 473 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRV 113 +PV+ ++EA K+ + + + A D+ +E+++ +I I I EGIP ++ Sbjct: 474 IPVYKNMSEAMKKHPDVDVLISFASLRSAFDSTMETMQYPQIHTIAIIAEGIPEAFTRKI 533 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 534 IKAADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 593 Query: 166 AVFQTSQEGLGQSTAVGIGGD 186 S+ G V IGGD Sbjct: 594 LNNIISRTTDGVFEGVAIGGD 614 >gi|297701138|ref|XP_002827587.1| PREDICTED: ATP-citrate synthase-like [Pongo abelii] Length = 1058 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 38/255 (14%) Query: 2 SILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++TK +V G+ +A G + + V ++P K YW + Sbjct: 490 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 +PVF +A+A ++ + + + A D+ +E+ ++ +V Sbjct: 550 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMET-----------------MNYAQVG 592 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 I P C I I+ ++R GSV +SRSG ++ E S+ Sbjct: 593 G---------IKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELNNIISRTT 643 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 G V IGGD G+ F+D + + + IV++GEIGG+ E + + +K+ G Sbjct: 644 DGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGIKE----G 699 Query: 235 R-KKPIVGFVAGKTA 248 R KPIV + G A Sbjct: 700 RLTKPIVCWCIGTCA 714 >gi|325929038|ref|ZP_08190193.1| succinyl-CoA synthetase, alpha subunit [Xanthomonas perforans 91-118] gi|325540571|gb|EGD12158.1| succinyl-CoA synthetase, alpha subunit [Xanthomonas perforans 91-118] Length = 59 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 30/58 (51%), Positives = 40/58 (68%) Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L+ Sbjct: 1 VGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAALV 58 >gi|13924588|gb|AAK49064.1|AF258272_1 succinyl-CoA-ligase alpha subunit [Brassica rapa] Length = 43 Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 29/43 (67%), Positives = 31/43 (72%) Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 EAVFQTS GLGQST VGIGGDP GT F+D L+ F D TE Sbjct: 1 EAVFQTSAVGLGQSTCVGIGGDPFNGTNFVDCLDKFFVDPQTE 43 >gi|92117458|ref|YP_577187.1| GCN5-related N-acetyltransferase [Nitrobacter hamburgensis X14] gi|91800352|gb|ABE62727.1| GCN5-related N-acetyltransferase [Nitrobacter hamburgensis X14] Length = 897 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 11/160 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPNC GIL P + R G++ ++S+SG + V ++ +G S V Sbjct: 125 RLIGPNCLGILMPTINLNASFAAHMPRAGNLALISQSGAIATGMVDWAARRNVGFSGIVS 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + D+LE F D T++I+M E A ++A +F+ R KP+V Sbjct: 185 VGDQ--LDVDIADLLEFFALDTDTKAILMYIE----AVKDARKFMSAARAAARVKPVVVV 238 Query: 243 VAGKTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGIC 281 +G+ A + H GA+ G D A + AGI Sbjct: 239 KSGRMAQGAKAAATHTGAL--AGSDAVYDA--AFRRAGIL 274 >gi|108805336|ref|YP_645273.1| CoA-binding protein [Rubrobacter xylanophilus DSM 9941] gi|108766579|gb|ABG05461.1| CoA-binding protein [Rubrobacter xylanophilus DSM 9941] Length = 911 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 25/249 (10%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 ++PK+ + + + + ++AE ER + +VI P + E +EA + + Sbjct: 62 VNPKRANV------LGIKAYPSIAEVPERV--DLAVIVSPAPTVPGVVRECVEAGVRGAI 113 Query: 100 CITEGI----PVLDMV--RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSV 153 I+ G P + + RV + R+IGPNC G++ P + + R GSV Sbjct: 114 IISAGFRETGPEGEALERRVLEEARRGRMRIIGPNCLGVMNPGTGLNATFAAGMARPGSV 173 Query: 154 GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVG 213 LS+SG L + + QE +G S+ V +G + + D++ D T SIV+ Sbjct: 174 AFLSQSGALMTAILDMSFQENVGFSSFVSVGS--MLDVGWGDLIYYLGGDPKTRSIVVYM 231 Query: 214 EIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN 273 E G +A FL + KPI+ AG+T R A A +G G+++ I+ Sbjct: 232 ESVG----DARSFLSAAREVALTKPIIVIKAGRTEQAAR----AAASHTGSLTGSDEVID 283 Query: 274 -AMKEAGIC 281 A + +G+ Sbjct: 284 AAFRRSGVL 292 >gi|294508161|ref|YP_003572219.1| Acyl-CoA synthetase (NDP forming) [Salinibacter ruber M8] gi|294344489|emb|CBH25267.1| Acyl-CoA synthetase (NDP forming) [Salinibacter ruber M8] Length = 940 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 6/125 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPNC GI+ P + GS+ +G V +S+SG L + + +E +G S+ V Sbjct: 175 RIVGPNCLGIMRPPNGLNATFAGSMANEGDVAFVSQSGALLTSILDWSFRENVGFSSFVS 234 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IG + ++ D++E D TESIV+ E G+A FL + KPI+ Sbjct: 235 IGS--MLDVDWGDMIEYLGDDPKTESIVLYMESIGNAR----SFLSAARDVAQSKPIIVI 288 Query: 243 VAGKT 247 AG+T Sbjct: 289 KAGRT 293 >gi|83814189|ref|YP_446229.1| acetyltransferase [Salinibacter ruber DSM 13855] gi|83755583|gb|ABC43696.1| acetyltransferase, GNAT family [Salinibacter ruber DSM 13855] Length = 916 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 6/125 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPNC GI+ P + GS+ +G V +S+SG L + + +E +G S+ V Sbjct: 151 RIVGPNCLGIMRPPNGLNATFAGSMANEGDVAFVSQSGALLTSILDWSFRENVGFSSFVS 210 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IG + ++ D++E D TESIV+ E G+A FL + KPI+ Sbjct: 211 IGS--MLDVDWGDMIEYLGDDPKTESIVLYMESIGNAR----SFLSAARDVAQSKPIIVI 264 Query: 243 VAGKT 247 AG+T Sbjct: 265 KAGRT 269 >gi|13924573|gb|AAK49058.1|AF258266_1 succinyl-CoA-ligase alpha subunit [Brassica napus] gi|13924575|gb|AAK49059.1|AF258267_1 succinyl-CoA-ligase alpha subunit [Brassica napus] gi|13924593|gb|AAK49066.1|AF258274_1 succinyl-CoA-ligase alpha subunit [Brassica rapa] Length = 43 Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 29/43 (67%), Positives = 31/43 (72%) Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 EAVFQT+ GLGQST VGIGGDP GT F+D LE F D TE Sbjct: 1 EAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFFVDPQTE 43 >gi|86605190|ref|YP_473953.1| acetyltransferase [Synechococcus sp. JA-3-3Ab] gi|86553732|gb|ABC98690.1| acetyltransferase, GNAT family [Synechococcus sp. JA-3-3Ab] Length = 931 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 16/194 (8%) Query: 64 EAKERTAA-----NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV-----LDMVRV 113 A ER +A + ++I +P +G I E +EA + + ++ G L++ + Sbjct: 71 RAYERLSALPEPVDLAIIAIPAAGVPAVIQECVEAGVKGAIVLSAGFKEIGPEGLELEKA 130 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + RLIGPNC GI P + + R G+VG +S+SG L + + QE Sbjct: 131 IQEAARGKLRLIGPNCLGIQNPHTGLNATFAAQMARPGNVGFISQSGALCTSILDWSLQE 190 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G S + +G + + D+++ D T SIV+ E G +A FL + Sbjct: 191 NVGFSAFISLGS--MLDVGWGDLIDYLGQDPHTHSIVLYMESVG----DARSFLSAAREV 244 Query: 234 GRKKPIVGFVAGKT 247 KPI+ AG+T Sbjct: 245 ALSKPIIVIKAGRT 258 >gi|120611483|ref|YP_971161.1| GCN5-like N-acetyltransferase [Acidovorax citrulli AAC00-1] gi|120589947|gb|ABM33387.1| GCN5-related N-acetyltransferase [Acidovorax citrulli AAC00-1] Length = 897 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 22/235 (9%) Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGP 127 +T A+ +VI +PP A A+ + + ++ GI +++K + L+GP Sbjct: 65 QTRADLAVIALPPQDAPAALEVAGRIGCRAALVLSHGIDADGALKLKKIARREGVHLLGP 124 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 N G+ P G + R+GS+ ++ +SG LT + + +G ST V +G P Sbjct: 125 NSLGLQRPHLQLNASAAGPLAREGSLALVCQSGALTASILDWAHKNAVGFSTVVSLG--P 182 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + VL+ D T+SIV+ E GSA +F+ KP+V AG+ Sbjct: 183 NTDVDIAQVLDFLANDGRTQSIVVYMEGIGSAR----RFMSALRSAANAKPVVVLKAGRK 238 Query: 248 APPGRTMG--HAGAVISGGKGGAEDKIN-AMKEAGICIAPSPARIGRSLVELLGS 299 P G H+G ++ G++D + A++ AG R+ RS VEL + Sbjct: 239 -PAGNEAAQTHSGTIV-----GSDDVFDAALRRAGAV------RV-RSFVELFSA 280 >gi|53803445|ref|YP_114834.1| acetyltransferase [Methylococcus capsulatus str. Bath] gi|53757206|gb|AAU91497.1| acetyltransferase, GNAT family [Methylococcus capsulatus str. Bath] Length = 892 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 13/163 (7%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RL+GPNC G++ P ++ G + ++S+SG L V S +G S Sbjct: 128 RLLGPNCLGLMRPSLNLNATFSNNVALPGGLALVSQSGALCTAIVDWASAHRIGFSVVAS 187 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IG +F D+L+ D+ T SI++ E +A +F+ R KP++ Sbjct: 188 IGS--AYDLDFGDILDYLALDQETRSILLYVE----GIRDARRFMSGLRAAARLKPVIVI 241 Query: 243 VAGKTAPPGR-TMGHAGAVISGGKGGAEDKIN-AMKEAGICIA 283 AG+ A R + H GA++ GA+D + A+K AG+ A Sbjct: 242 KAGRYAEGSRAAVSHTGALV-----GADDVFDAALKRAGVVRA 279 >gi|5851949|emb|CAB53456.3| ATP-citrate lyase [Gallus gallus] Length = 170 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 12/167 (7%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIP 96 G H +K YW + +PV+ +++A ++ + + + A D+ +E++ +I Sbjct: 3 GDHRQK--FYWGHKEILIPVYKNMSDAMRKHPEVDVLINFASLRSAYDSTVETMNYPQIR 60 Query: 97 LIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIF 148 I I EGIP ++ +K +IGP G + P KIG I+ ++ Sbjct: 61 TIAIIAEGIPEALTRKLIKAADKKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLY 120 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 R GSV +SRSG ++ E S+ G V IGGD G+ F+D Sbjct: 121 RPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMD 167 >gi|297607513|ref|NP_001060091.2| Os07g0577700 [Oryza sativa Japonica Group] gi|255677915|dbj|BAF22005.2| Os07g0577700 [Oryza sativa Japonica Group] Length = 61 Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 28/46 (60%), Positives = 32/46 (69%) Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 VFQT+ GLGQST VGIGGDP GT F+D LE F+ D TE + V Sbjct: 14 VFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFVDDPQTEGTLSV 59 >gi|215259799|gb|ACJ64391.1| ATP-citrate synthase [Culex tarsalis] Length = 315 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 12/154 (7%) Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 GSV +SRSG ++ E S G V IGGD GT F+D + + AD + IV Sbjct: 1 GSVAYVSRSGGMSNELNNIISLTTDGVFEGVAIGGDRYPGTTFMDHILRYQADPDAKMIV 60 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKG 266 ++GE+GG E E + L+D GR KP++ + G A + GHAG+ + + Sbjct: 61 LLGEVGGVEEYEVCEALQD----GRITKPLIAWCIGTCAGMFTSEVQFGHAGSCANSDRE 116 Query: 267 GAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 A K ++ AG + S +G +L+GS+ Sbjct: 117 TATAKNKSLAAAGAHVPDSFDTLG----DLVGSV 146 >gi|161527714|ref|YP_001581540.1| CoA-binding domain-containing protein [Nitrosopumilus maritimus SCM1] gi|160339015|gb|ABX12102.1| CoA-binding domain protein [Nitrosopumilus maritimus SCM1] Length = 698 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 19/153 (12%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK-----GSVGILSRSGTLTYEAVFQTSQ 172 +K + +++GPNC G++ DS M S F K G + ++S+SG + V S Sbjct: 119 KKYNMQVVGPNCLGVMNLDS---KTMMNSTFLKVTPKSGKIALVSQSGAICAALVEDASA 175 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK--DE 230 +G+G S V +G V +DVL++ + TE IVM E G +E FLK Sbjct: 176 QGIGFSAVVSLGNKAVMSE--VDVLKILANHKQTEVIVMYLEDMGDGQE----FLKVCKN 229 Query: 231 AKRGRKKPIVGFVAGKTAPPG--RTMGHAGAVI 261 + KKP++ +G++ P G M H GA++ Sbjct: 230 ITKKLKKPVLVLKSGRS-PEGAKAAMSHTGALM 261 >gi|209527639|ref|ZP_03276138.1| CoA-binding domain protein [Arthrospira maxima CS-328] gi|209491921|gb|EDZ92277.1| CoA-binding domain protein [Arthrospira maxima CS-328] Length = 916 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 32/269 (11%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 I+PK+ + + + + ++ E E + ++I P D + + +EA + + Sbjct: 64 INPKRSNV------LGIKAYPSIGEVPE--TVDLAIIITPAPTVPDIVRQCVEAGVKGAI 115 Query: 100 CIT--------EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 ++ +G+ + + AR +S+ R+IGPNC G++ P + ++ +G Sbjct: 116 ILSAGFKEIGPKGVELEQQILEYAR--QSTMRIIGPNCLGLMNPLTGLNATFASAMAIRG 173 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 SVG +S+SG L + + QE +G S V IG + + D++ D T+SIV+ Sbjct: 174 SVGFISQSGALCTSILDWSFQENVGFSAFVSIGS--MLDVGWGDLIYYLGNDPNTKSIVI 231 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT-APPGRTMGHAGAVISGGKGGAED 270 E G +A FL + KPI+ AG+T A H GA+ G++D Sbjct: 232 YMESIG----DARSFLSAAREVALTKPIIVIKAGRTEAAAKAAASHTGAL-----AGSDD 282 Query: 271 KIN-AMKEAGICIAPSPARIGRSLVELLG 298 ++ A + G+ A + SL ELLG Sbjct: 283 VLDAAFRRCGVLRVYHIAHLF-SLSELLG 310 >gi|323097751|emb|CBJ18437.1| ATP citrate lyase [uncultured bacterium] Length = 335 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 12/124 (9%) Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPI 239 + IGGD G+ FID L + + ++++GE+GG+ E + + K G+ KPI Sbjct: 2 IAIGGDRFVGSVFIDNLLRMEKNPDVKYMILLGEVGGTEEYKVIE----AVKSGKITKPI 57 Query: 240 VGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS----PARIGRS 292 + + G K G GHAGA +G AE K NAM EAGI + S PA I + Sbjct: 58 IAWCIGTIAKYYDSGVQFGHAGASANGEMETAEYKNNAMAEAGIYVPTSFNELPAMINKV 117 Query: 293 LVEL 296 EL Sbjct: 118 FTEL 121 >gi|91975831|ref|YP_568490.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris BisB5] gi|91682287|gb|ABE38589.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris BisB5] Length = 907 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 6/131 (4%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 KS RLIGPNC GI+ P S + R+G++ ++S+SG + V + + +G Sbjct: 120 RKSGIRLIGPNCLGIMVPSSNLNASFAAHMPRRGNLALISQSGAIAAGMVDWAAVKNIGF 179 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V IG + D+L+ + AD T +I++ E A +A +F+ R K Sbjct: 180 SGIVSIGDQ--LDVDIADMLDFYAADIETRAILLYIE----AVTDARKFMSAARAAARVK 233 Query: 238 PIVGFVAGKTA 248 P+V +G+ A Sbjct: 234 PVVVVKSGRMA 244 >gi|68068033|ref|XP_675930.1| acetyl CoA synthetase [Plasmodium berghei strain ANKA] gi|56495386|emb|CAH94920.1| acetyl CoA synthetase, putative [Plasmodium berghei] Length = 713 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 81/169 (47%), Gaps = 11/169 (6%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++ R+IGPNC GI+ S KG ++S+SG + A+ + Q +G Sbjct: 154 KNNNIRIIGPNCLGIIHSYHNMNASFADSEILKGHFSLISQSGAICSAALDLSLQHNIGF 213 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S + +G + +F +++E D+ T+ I++ E G + +F++ + K Sbjct: 214 SHFISVGS--MCDVQFYELIEYLFYDDNTKYILLYVESIG----DMNRFMETCKRICLYK 267 Query: 238 PIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 PI+ +GKTA + H G+++ G E +MK+ G+ +A + Sbjct: 268 PIIVLKSGKTAKAAEAAISHTGSMV----GNYEIFYASMKKLGVLVAEN 312 >gi|332159046|ref|YP_004424325.1| hypothetical protein PNA2_1406 [Pyrococcus sp. NA2] gi|331034509|gb|AEC52321.1| hypothetical protein PNA2_1406 [Pyrococcus sp. NA2] Length = 458 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 16/218 (7%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL------EKSSSRLI 125 + ++I VP D +I+ E + ++ IT G K K R+I Sbjct: 66 DLAIIVVPKRFVKDTLIQCGEKGVKGVIIITAGFGETGEEGKKEERELVEIAHKYGMRII 125 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 GPNC GI+ + + ++ +KG+V +S+SG L V++T +E +G S + +G Sbjct: 126 GPNCVGIMNTHA-DLNATFITVAKKGNVAFISQSGALGAGIVYKTIKEDIGFSKFISVGN 184 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 + +F +++E E ++I + E + +F++ K +KKPI+ AG Sbjct: 185 --MADVDFAELMEYLAETEEDKAIALYIE----GIRDGKRFMEIAKKVSKKKPIIALKAG 238 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 K+ R ++G E A K+ G+ IA Sbjct: 239 KSESGARAASSHTGSLAGSWRIYE---AAFKQTGVLIA 273 >gi|332186597|ref|ZP_08388340.1| acetyltransferase family protein [Sphingomonas sp. S17] gi|332013249|gb|EGI55311.1| acetyltransferase family protein [Sphingomonas sp. S17] Length = 876 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 8/137 (5%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 E RL+GP+ G+L P R G + LS+SG L + G+G Sbjct: 118 EAHGMRLLGPDSVGLLVPSVRLNASFAARAARPGRLAFLSQSGALVTAMLDWADARGVGF 177 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVM-VGEIGGSAEEEAAQFLKDEAKRGRK 236 S V +G + +F D+++L+ AD T++I++ V EIG +AA+FL Sbjct: 178 SGVVALGD--MIDVDFADLIDLYTADPHTDAILLYVEEIG-----DAARFLSAARAATLI 230 Query: 237 KPIVGFVAGKTAPPGRT 253 KP++ AG+T RT Sbjct: 231 KPVIAIKAGRTWASHRT 247 >gi|121602974|ref|YP_980303.1| GCN5-like N-acetyltransferase [Polaromonas naphthalenivorans CJ2] gi|120591943|gb|ABM35382.1| GCN5-related N-acetyltransferase [Polaromonas naphthalenivorans CJ2] Length = 896 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 116/264 (43%), Gaps = 23/264 (8%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 +H + +TG + + TT A +T A+ ++I +PP A+ + Sbjct: 35 LHQALRAQKYTGTLQFLDIHTTGTLADLAQTGADLAIIALPPQEVAAALEIAGRLTCRSA 94 Query: 99 VCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSR 158 + IT GI +K + L+GPN G+ P G + + GS+ ++S+ Sbjct: 95 LVITSGINADGAAELKRIARREGIFLLGPNGLGLQRPHLQLNASAAGPMAKPGSLALVSQ 154 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGS 218 SG LT + S+ G+G S+ V +G P + VL+ D T+SIV+ E S Sbjct: 155 SGALTASILDWASKNGVGFSSVVSLG--PNTSVDIAQVLDFLANDRQTQSIVIYLEGISS 212 Query: 219 AEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG--HAGAVISGGKGGAEDKIN-AM 275 A +F+ KP+V AG+ P G H+GA++ G++D + A+ Sbjct: 213 AR----RFMSALRSAANAKPVVVLKAGRR-PAGNEAAQTHSGAIV-----GSDDVFDAAL 262 Query: 276 KEAGICIAPSPARIGRSLVELLGS 299 + AG R+ RS VEL + Sbjct: 263 RRAGAV------RV-RSFVELFSA 279 >gi|17228264|ref|NP_484812.1| acetyl-CoA synthetase [Nostoc sp. PCC 7120] gi|17130114|dbj|BAB72726.1| acetyl-CoA synthetase [Nostoc sp. PCC 7120] Length = 916 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 24/216 (11%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 ++PK+ S + + + ++A E + ++I P S I E ++A + ++ Sbjct: 65 VNPKRHSV------LGIKAYPSIAAIPE--TVDLAIIATPASTVPGIISECVDAGVQGVI 116 Query: 100 CIT--------EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 I+ EGI + + +AR + + R+IGPNC G+++P + S+ R G Sbjct: 117 IISAGFKEAGAEGIALERQILEEAR--RGNIRIIGPNCLGVMSPRTGLNATFASSMARSG 174 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 +VG LS+SG L + + +E +G S V IG + + D++ D T+SIV+ Sbjct: 175 NVGFLSQSGALCTAILDWSVRENVGFSAFVSIGS--MLDVGWGDLIYYLGDDPQTKSIVI 232 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 E G +A F+ + KPI+ AG+T Sbjct: 233 YMESIG----DARSFISAAREVALTKPIIVIKAGRT 264 >gi|307545088|ref|YP_003897567.1| hypothetical protein HELO_2498 [Halomonas elongata DSM 2581] gi|307217112|emb|CBV42382.1| K09181 hypothetical protein [Halomonas elongata DSM 2581] Length = 892 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 18/155 (11%) Query: 114 KARLEKSSS---RLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 KA LE + R++GPNC GIL+P ++ + P KG + +++SG + Sbjct: 117 KAMLEAAKPFLMRIVGPNCLGILSPHVGINASFAHLTPA----KGDIAFVTQSGAVATSI 172 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + S G+G S +G + +F D+L+ D T SI++ E A EA +F Sbjct: 173 LDWASARGIGFSHVASLGS--MSDVDFGDMLDYLALDPKTHSILLYAE----AVTEARKF 226 Query: 227 LKDEAKRGRKKPIVGFVAGK-TAPPGRTMGHAGAV 260 L R KP+V AG+ TA + H GA+ Sbjct: 227 LSAARMASRNKPVVVVKAGRSTAGAKAALSHTGAL 261 >gi|217970451|ref|YP_002355685.1| CoA-binding protein [Thauera sp. MZ1T] gi|217507778|gb|ACK54789.1| CoA-binding domain protein [Thauera sp. MZ1T] Length = 895 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 11/164 (6%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + RL+GPNC G++ P + KGS+G++S+SG L + +G Sbjct: 124 HRHRIRLLGPNCLGVMRPQLGVNATFAHASALKGSIGLISQSGALCAAILDWAKPNNVGF 183 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 ST V +G +F +VLE ++D TESI + E +A +F+ R K Sbjct: 184 STVVSLGSS--SDIDFGEVLEYMISDPRTESIFLYVE----GIRDARRFMSALRGAARVK 237 Query: 238 PIVGFVAGKTAPPGRT-MGHAGAVISGGKGGAEDKINAMKEAGI 280 P++ AG+ R + H+GA + G+ D A++ AG+ Sbjct: 238 PVLLVKAGRHPGASRAILSHSGAPM--GEDAVFDA--ALRRAGV 277 >gi|13924591|gb|AAK49065.1|AF258273_1 succinyl-CoA-ligase alpha subunit [Brassica rapa] Length = 43 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/43 (65%), Positives = 29/43 (67%) Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 EAVFQ GLGQST VGIGGDP GT F+D LE F D TE Sbjct: 1 EAVFQPPAVGLGQSTCVGIGGDPFNGTSFVDCLEKFFVDPQTE 43 >gi|326317241|ref|YP_004234913.1| GCN5-like N-acetyltransferase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374077|gb|ADX46346.1| GCN5-related N-acetyltransferase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 897 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 25/271 (9%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFT--TVAEAKERTAANASVIYVPPSGAGDAIIESI 91 T +H + +TG + + T T+A+ + T A+ +VI +PP A+ + Sbjct: 30 TPAARALHEALRAQRFTGTLQFLDIHTSGTLADLAQ-TRADLAVIALPPQDTAAALEVAG 88 Query: 92 EAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 + ++ G+ +++K + L+GPN G+ P G + R+G Sbjct: 89 RIGCRAALVLSHGMDADGALKLKKIARREGVHLLGPNSLGLQRPHLQLNASAAGPLAREG 148 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 S+ ++ +SG LT + + +G ST V +G P + VL+ D T+SIV+ Sbjct: 149 SLALVCQSGALTASILDWAHKNAVGFSTVVSLG--PNTDVDIAQVLDFLANDGRTQSIVV 206 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG--HAGAVISGGKGGAE 269 E GSA +F+ KP+V AG+ P G H+G ++ G++ Sbjct: 207 YMEGIGSAR----RFMSALRSAANAKPVVVLKAGRK-PAGNEAAQTHSGTIV-----GSD 256 Query: 270 DKIN-AMKEAGICIAPSPARIGRSLVELLGS 299 D + A++ AG R+ RS VEL + Sbjct: 257 DVFDAALRRAGAV------RV-RSFVELFSA 280 >gi|218441180|ref|YP_002379509.1| CoA-binding protein [Cyanothece sp. PCC 7424] gi|218173908|gb|ACK72641.1| CoA-binding domain protein [Cyanothece sp. PCC 7424] Length = 921 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 71/271 (26%), Positives = 113/271 (41%), Gaps = 19/271 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 +S + + NT V V G T K G+ G I+P + G P + Sbjct: 23 LSFIFNPNT-VAVIGATDKEGSVGRTLLWNLISNPFGGTIYPINPKRHNVLGIPAYPHIS 81 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-----PVLDMVRVKA 115 TV EA + +VI P I E I+A++ + I+ G P ++ R Sbjct: 82 TVPEA-----IDLAVIATPAPTIPGIIRECIDAKVKGAIIISAGFREIGEPGRELERQVQ 136 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 + + R+IGPNC G++ P + I R G+VG +S+SG + + + E + Sbjct: 137 EIAQGKIRIIGPNCLGVMNPRTGLNATFASRIARPGNVGFISQSGAICTAVLDWSVPENV 196 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S + IG + + D++ D T IV+ E G +A FL + Sbjct: 197 GFSAFISIGS--MIDVNWGDLIYYLGDDPYTHCIVIYMESIG----DARSFLSAAREVAL 250 Query: 236 KKPIVGFVAGKTAPPGR-TMGHAGAVISGGK 265 KPI+ +G+T + H GA +SG K Sbjct: 251 TKPIIIIKSGQTEAAAKAATSHTGA-LSGSK 280 >gi|261342110|ref|ZP_05969968.1| protein FdrA [Enterobacter cancerogenus ATCC 35316] gi|288315441|gb|EFC54379.1| protein FdrA [Enterobacter cancerogenus ATCC 35316] Length = 513 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 13/202 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK R AN +VI V + A +++E ++ +++ ++ + + D + +K Sbjct: 99 YATIASAKAHRPDANLAVISVNGTFAAREARQALENDLNVML-FSDNVSLDDELALKQLA 157 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + G+ + +GS+GI+ SGT + E + + G G Sbjct: 158 HQKGLLMMGPDCGTAIINGA---GLCFANAVCRGSIGIVGASGTGSQELSVRIHEFGGGV 214 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + ADE T++IV++ + A E R Sbjct: 215 SQLIGTGGRDLSEKIGGLMMLDAIAMLEADENTQAIVLISKPPAPAVAEKVL----ARAR 270 Query: 234 GRKKPIVGFVAGKTAPPGRTMG 255 +KP++ G+ APP G Sbjct: 271 ACRKPVIACFLGRNAPPADEDG 292 >gi|302343107|ref|YP_003807636.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075] gi|301639720|gb|ADK85042.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075] Length = 489 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 74/169 (43%), Gaps = 15/169 (8%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSI-FRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 E+ R +GPNC G+ P CKI P G +G+ S+SG+ + Q + LG Sbjct: 127 EQYGMRFLGPNCLGVANPH-CKINTTPLPYECGPGFIGLASQSGSFVTQMYDQLRRLSLG 185 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 STA+ +G + + +D LE D T+ I M E +F++ + K Sbjct: 186 FSTALSVGNE--ANVDLVDCLEYLGDDPHTKVIGMYVE----TIRRGRRFVEVARRVALK 239 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN--AMKEAGICIA 283 KPIV F G G G A+ G DK+ +++AG+ A Sbjct: 240 KPIVAFYVG-----GSETGRRAALSHTGALAGPDKLYDGILRQAGVIRA 283 >gi|240102483|ref|YP_002958792.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA) [Thermococcus gammatolerans EJ3] gi|239910037|gb|ACS32928.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA) [Thermococcus gammatolerans EJ3] Length = 458 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 20/222 (9%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL------EKSSSRLI 125 + ++I VP AII+ E + V IT G K K RLI Sbjct: 67 DLAIIVVPKRFVKQAIIDCGEKGVKGAVIITAGFGETGEEGKKEERELVEIAHKYGMRLI 126 Query: 126 GPNCPGILTP--DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 GPNC G++ D IM +KGS+ +S+SG L V++T +EG+G S V + Sbjct: 127 GPNCVGVMNTHNDMNATFIMDA---KKGSIAFVSQSGALGAGIVYKTVKEGIGFSKFVSV 183 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G + +F +++E +LA E E + I G ++ +F++ K +KKP++ Sbjct: 184 GN--MADLDFAELME-YLA-ETGEDKAIALYIEGL--KDGRKFIEVAKKVTKKKPVIALK 237 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 AGK+ R ++G E A K++G+ IA + Sbjct: 238 AGKSESGARAASSHTGSLAGSWKIYE---AAFKQSGVLIAET 276 >gi|13160653|gb|AAK13318.1|AF290958_1 ATP:citrate lyase [Capsicum annuum] Length = 608 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 16/203 (7%) Query: 95 IPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI------- 147 I ++ I EG+P D ++ + ++ +IGP G + + KIG G+I Sbjct: 104 IRVVAIIAEGVPESDTKQLIGFAKANNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIQCK 163 Query: 148 -FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 + GI +SG ++ E ++ G + IGGD G+ D + F Sbjct: 164 LLQAWICGIRLKSGGMSNELYNTIARVTDGVYEGIAIGGDVFPGSTLSDHVLRFNNIPQV 223 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVIS 262 + IV++GE+GG E + L K+G+ KP+V +V+G A ++ GHAGA Sbjct: 224 KMIVVLGELGGRDEYSLVEAL----KQGKINKPVVAWVSGTCATLFKSEVQFGHAGAKSG 279 Query: 263 GGKGGAEDKINAMKEAGICIAPS 285 G A+ K A+++AG + S Sbjct: 280 GEMESAQAKNQALRDAGAVVPTS 302 >gi|57640074|ref|YP_182552.1| acetyl-CoA synthetase II (NDP forming), alpha subunit [Thermococcus kodakarensis KOD1] gi|57158398|dbj|BAD84328.1| acetyl-CoA synthetase II (NDP forming), alpha subunit [Thermococcus kodakarensis KOD1] Length = 458 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 88/170 (51%), Gaps = 14/170 (8%) Query: 118 EKSSSRLIGPNCPGIL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K R+IGPNC G++ T D + + +KGS+ +S+SG L V++T +EG+G Sbjct: 119 HKYGMRIIGPNCVGVMNTQDDMNATFIMDA--KKGSIAFISQSGALGAGIVYKTVKEGIG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GR 235 S V IG + +F +++E +LAD + + + I G ++ +F+ D AKR + Sbjct: 177 FSKFVSIGN--MADVDFSELME-YLADTKEDKAIAL-YIEGL--KDGRKFI-DVAKRVTK 229 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 KKP++ AG++ R ++G E A K++G+ +A + Sbjct: 230 KKPVIALKAGRSESGARAASSHTGSLAGSWKIYE---AAFKQSGVLVADT 276 >gi|89901129|ref|YP_523600.1| GCN5-like protein N-acetyltransferase [Rhodoferax ferrireducens T118] gi|89345866|gb|ABD70069.1| GCN5-related N-acetyltransferase [Rhodoferax ferrireducens T118] Length = 892 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 17/173 (9%) Query: 113 VKARLEKSSSR----LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + A L K + R L+GPNC G P + G + G + ++S+SG LT + Sbjct: 105 LAAELNKIARRDGMHLLGPNCLGFQRPHLLLNASVAGVLSAPGPLALVSQSGALTSSILD 164 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + G+G ST V +G P + VL+ +D T SIV+ E SA +F+ Sbjct: 165 WAQKNGVGFSTVVSLG--PNTAVDMAQVLDFLASDAHTHSIVVYLEGISSAR----RFMS 218 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKIN-AMKEAG 279 KP+V G+ A R + H+GA++ G++D + A++ AG Sbjct: 219 ALRAAANAKPVVVLKGGRKAAGNRAALTHSGAIV-----GSDDVFDAALRRAG 266 >gi|85716128|ref|ZP_01047104.1| hypothetical protein NB311A_11130 [Nitrobacter sp. Nb-311A] gi|85697127|gb|EAQ35009.1| hypothetical protein NB311A_11130 [Nitrobacter sp. Nb-311A] Length = 883 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 11/160 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPNC GIL P + R G++ ++S+SG + + ++ +G S + Sbjct: 111 RLIGPNCLGILMPTIDLNASFAAHMPRAGNLALISQSGAIATGMIEWAARRNVGFSGIIS 170 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + D+L+ F D T++I+M E A ++A +F+ R KP+V Sbjct: 171 VGDQ--LDVDVADLLDFFALDTETKAILMYIE----AVKDARKFMSAARAAARVKPVVVV 224 Query: 243 VAGKTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGIC 281 +G+ A + H GA+ G D A + AGI Sbjct: 225 KSGRMAQGAKAAATHTGAL--AGSDAVYDA--AFRRAGIL 260 >gi|75910860|ref|YP_325156.1| GCN5-like N-acetyltransferase [Anabaena variabilis ATCC 29413] gi|75704585|gb|ABA24261.1| GCN5-related N-acetyltransferase [Anabaena variabilis ATCC 29413] Length = 918 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 8/145 (5%) Query: 103 EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTL 162 EGI + + +AR + + R+IGPNC G+++P + S+ R G+VG LS+SG L Sbjct: 128 EGIALERQILAEAR--RGNIRIIGPNCLGVMSPRTGLNATFASSMARSGNVGFLSQSGAL 185 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 + + +E +G S V IG + + D++ D T+SIV+ E G + Sbjct: 186 CTAILDWSVRENVGFSAFVSIGS--MLDVGWGDLIYYLGDDPQTKSIVIYMESIG----D 239 Query: 223 AAQFLKDEAKRGRKKPIVGFVAGKT 247 A F+ + KPI+ AG+T Sbjct: 240 ARSFISAAREVALTKPIIVIKAGRT 264 >gi|18976904|ref|NP_578261.1| hypothetical protein PF0532 [Pyrococcus furiosus DSM 3638] gi|18892519|gb|AAL80656.1| hypothetical protein PF0532 [Pyrococcus furiosus DSM 3638] Length = 457 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 24/222 (10%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---------PVLDMVRVKARLEKSSS 122 + ++I VP +IE E + +V IT G ++V + K Sbjct: 66 DLAIIVVPKKFVKQTLIECGEKGVKGVVIITAGFGETGEEGKREEKELVEIA---HKYGM 122 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R+IGPNC GI+ + + ++ +KG+V +S+SG L V++T +E +G S + Sbjct: 123 RIIGPNCVGIMNTHA-NLNATFITVAKKGNVAFISQSGALGAGIVYKTIKEDIGFSKFIS 181 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + +F D++E +LAD + + + I G ++ +F++ K +KKP++ Sbjct: 182 VGN--MADLDFADLME-YLADTQEDKAIAL-YIEGI--KDGRRFIEVAKKVTKKKPVIAL 235 Query: 243 VAGKTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGICIA 283 AGK+ R H G++ G + A K++G+ +A Sbjct: 236 KAGKSESGSRAAASHTGSL----AGSWKIYEAAFKQSGVLVA 273 >gi|315502624|ref|YP_004081511.1| CoA-binding domain protein [Micromonospora sp. L5] gi|315409243|gb|ADU07360.1| CoA-binding domain protein [Micromonospora sp. L5] Length = 851 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 45/276 (16%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 +HP + +P + + A+A + + +V+ VPP D + ++ A +V Sbjct: 232 VHPSAATV------AGLPAYPSAADAGQDV--DLAVVAVPPDAVTDVVHDAARAGAHGLV 283 Query: 100 CITEGIP-------VLDMVRVKARLEKSSSRLIGPNCPGILTPD-SCKIG-----IMPGS 146 I+ G V+A + R++GPNC G+ D + ++ ++P + Sbjct: 284 VISAGFAESGPAGAAAQRALVRA-AHLAGMRVVGPNCLGVANTDPAVRLNATLAPVLPAA 342 Query: 147 IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP-VKGTEFIDVLELFLADEA 205 G VG+ S+SG + + S+ GLG S+ V G V G D+L+ + D A Sbjct: 343 ----GRVGVFSQSGAFGVALLAEASRRGLGLSSFVSAGNRADVSGN---DLLQYWQDDPA 395 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK 265 T+ I + E G+ +F + + GR+KP+V A PPG +G A A+ + Sbjct: 396 TDVITLYLETFGNPR----KFARLARRIGRRKPVVAL-ASLARPPG--VGDAPALDAAAV 448 Query: 266 GG--------AEDKINAMKEAGICIAPSPARIGRSL 293 D ++ + + G+ +A P GR + Sbjct: 449 SALFAQSGVIRVDTVSELLDVGVLLAHQPLPAGRRV 484 >gi|291236546|ref|XP_002738200.1| PREDICTED: succinate-CoA ligase, GDP-forming alpha subunit-like, partial [Saccoglossus kowalevskii] Length = 71 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/61 (59%), Positives = 52/61 (85%) Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+ GF+AG TAPPGR MGHAGA+I+GGKGGA++KI A+++AG+ + SPA+IG ++++ Sbjct: 5 KPVAGFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIKALEDAGVTVTMSPAQIGNTILKE 64 Query: 297 L 297 L Sbjct: 65 L 65 >gi|269217093|ref|ZP_06160947.1| protein FdrA [Slackia exigua ATCC 700122] gi|269129230|gb|EEZ60315.1| protein FdrA [Slackia exigua ATCC 700122] Length = 488 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 18/195 (9%) Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ A E AN +VI VP A +++E + +++ ++ + + D + +K Sbjct: 86 TLTRAAEDVDANIAVISVPGIYAAAEARKALEKGLHVLM-FSDNVSLDDEIALKDLAHGK 144 Query: 121 SSRLIGPNCPGILTPDSCK---IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 ++GP+C +C + + ++GS+GI+S SGT EA G+G Sbjct: 145 GLLMMGPDCG------TCAFQGVAFCFANAVQRGSIGIVSASGTGAQEAAVLLDSWGMGV 198 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG V G F+D + ADE T I+++ + E A+ ++D A R Sbjct: 199 SQIIGTGGRDLSIEVGGRMFLDAFDALEADEGTSHILLISK---PPHETVARKVRDRAAR 255 Query: 234 GRKKPIVGFVAGKTA 248 KP+V G A Sbjct: 256 S-TKPVVACFLGDVA 269 >gi|212224464|ref|YP_002307700.1| acetyl-CoA synthetase II (NDP forming), alpha subunit [Thermococcus onnurineus NA1] gi|212009421|gb|ACJ16803.1| acetyl-CoA synthetase II (NDP forming), alpha subunit [Thermococcus onnurineus NA1] Length = 459 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 55/219 (25%), Positives = 102/219 (46%), Gaps = 18/219 (8%) Query: 74 SVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL--DMVRVKARL----EKSSSRLIGP 127 +V+ VP II+ E + I+ IT G + D R + L + R++GP Sbjct: 69 AVVVVPKRFVKQTIIDCGEKGVKGIILITAGFGEVGEDGKREERELVEIAHRYGMRIVGP 128 Query: 128 NCPGIL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 NC GI+ T + + + +KG + +S+SG L +++T +EG+G S V IG Sbjct: 129 NCVGIMNTHNDMNATFVANA--KKGDIAFISQSGALGAGIIYKTIKEGIGFSKFVSIGN- 185 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + +F + +E D +++I + E ++ +F++ + +KKP++ AGK Sbjct: 186 -MADVDFAEFMEYLANDPESKAIALYIE----GIKDGRKFMEVAKRVTKKKPVIVLKAGK 240 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + R ++G E A K++GI +A + Sbjct: 241 SESGARAASSHTGSLAGSYKIYE---AAFKQSGIIVADT 276 >gi|323097755|emb|CBJ18439.1| ATP citrate lyase [uncultured bacterium] Length = 248 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 8/124 (6%) Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPI 239 + IGGD G+ FID L + + ++++GE+GG+ E + + +K G+ KPI Sbjct: 2 IAIGGDRFVGSVFIDNLLRMQENPDVKYMILLGEVGGTEEYKVIEAVKS----GKITKPI 57 Query: 240 VGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + G K G GHAGA +G AE K NAMKEAGI + + + + E+ Sbjct: 58 IAWCIGTIAKYYDSGVQFGHAGASANGEMETAEYKNNAMKEAGIHVPDTFNDLPAKIKEV 117 Query: 297 LGSL 300 SL Sbjct: 118 YESL 121 >gi|115761337|ref|XP_001196395.1| PREDICTED: similar to ENSANGP00000012364 [Strongylocentrotus purpuratus] gi|115948420|ref|XP_799305.2| PREDICTED: similar to ENSANGP00000012364 [Strongylocentrotus purpuratus] Length = 588 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 11/160 (6%) Query: 147 IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 ++R+GSV LSRSG L+ E ++ G + +GG G+ +D + + A Sbjct: 402 LYRQGSVVYLSRSGGLSTELCVSIARNSDGIYMGIALGGGRYTGSGIMDHIRFLQDNHAV 461 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG------KTAPPGRTMGHAGAV 260 + +++GE+GG E E + LK K KP++ F G K P GH+G Sbjct: 462 KCFILIGEVGGLEEYEVCEALK---KGTITKPVIAFCIGTCTDLYKQEPA--YFGHSGGG 516 Query: 261 ISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 + A K A+ +AG + + + L E+ L Sbjct: 517 TDSERESAMVKNQALAQAGAIVPDTFDSMAVKLAEVYDKL 556 >gi|14590635|ref|NP_142703.1| hypothetical protein PH0766 [Pyrococcus horikoshii OT3] gi|3257174|dbj|BAA29857.1| 457aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 457 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 22/221 (9%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---------PVLDMVRVKARLEKSSS 122 + ++I VP D +I+ E + +V IT G ++V + K Sbjct: 66 DLAIIVVPKRFVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIA---HKYGM 122 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R+IGPNC GI+ + ++ +KG+V +S+SG L V++T +E +G S + Sbjct: 123 RIIGPNCVGIMNT-HVDLNATFITVAKKGNVAFISQSGALGAGIVYKTIKEDIGFSKFIS 181 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + +F +++E E ++I + E +F++ + +KKPI+ Sbjct: 182 VGN--MADVDFAELMEYLADTEEDKAIALYIE----GVRNGKKFMEVAKRVTKKKPIIAL 235 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 AGK+ R ++G E A K++G+ +A Sbjct: 236 KAGKSESGARAASSHTGSLAGSWKIYE---AAFKQSGVLVA 273 >gi|301057108|ref|ZP_07198248.1| CoA binding domain protein [delta proteobacterium NaphS2] gi|300448789|gb|EFK12414.1| CoA binding domain protein [delta proteobacterium NaphS2] Length = 493 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 13/174 (7%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 K+ +IGPN GI++P + +KGSV +S+SG L + + Q+G+G Sbjct: 125 RKNHIWIIGPNTMGIISPHAGLFATGSHPRPKKGSVAFISQSGNLGTQLAYWAEQQGVGI 184 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S VG G + + D LE + T +V+ E G + +F++ K RKK Sbjct: 185 SLFVGSGNEAMLTCP--DYLEYLAHNSNTRYVVLYVENVG----DGFRFMETAEKINRKK 238 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARI 289 P++ G TA G A G G +D + A ++AGI P+ + Sbjct: 239 PVILLKGGITA-----AGKKAAASHTGAMGGDDAVFRGACRQAGILNVSVPSDL 287 >gi|296104338|ref|YP_003614484.1| FdrA family protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058797|gb|ADF63535.1| FdrA family protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 513 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 13/202 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK R +N +VI V A +++E ++ +++ ++ + + D + +K Sbjct: 99 YATLASAKAHRPDSNLAVISVNGMFAAREARKALENDLNVML-FSDNVSLDDELALKQLA 157 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C G T + G+ + R+GS+GI+ SGT + E + + G G Sbjct: 158 HQKGLLMMGPDC-GTATINGA--GLCFANAVRRGSIGIVGASGTGSQELSVRIHEFGGGV 214 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D +++ AD+AT+ I ++ + A E R Sbjct: 215 SQLIGTGGRDLSEKIGGLMMLDAIDMLEADDATQVIALISKPPAPAVAEKVL----ARAR 270 Query: 234 GRKKPIVGFVAGKTAPPGRTMG 255 +KP++ G+ PP G Sbjct: 271 ACRKPVIACFLGRNEPPADEDG 292 >gi|300175837|emb|CBK21833.2| unnamed protein product [Blastocystis hominis] Length = 905 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 67/236 (28%), Positives = 109/236 (46%), Gaps = 27/236 (11%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 + + T+ + E+ + +VI +P A+ E EA + I+ I+ G ++ + A Sbjct: 77 IKAYKTIGDVPEQV--DLAVICIPAKRVLGAVHECGEAGVRGIIIISAGFK--EVGKEGA 132 Query: 116 RLEKSS--------SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 LEK+ R+IGPNC G + P + ++ KG V +S+SG L + Sbjct: 133 ALEKACVEEAHKYGMRIIGPNCLGAMVPITGLNASFASTMALKGEVAFISQSGALMCAML 192 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + +EGLG S V IG + + D++ F D T++I++ E G +A FL Sbjct: 193 DWSLKEGLGFSAFVSIGS--MADVNWGDLIYYFGNDPNTKAIMIYMETIG----DARSFL 246 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS--GGKGGAEDKIN-AMKEAGI 280 + +KPIV PGRT A A S G G++D + A K+AG+ Sbjct: 247 SAAREVALRKPIV------VIKPGRTAAAAAAAASHTGSLTGSDDVLTAAFKKAGV 296 >gi|302866068|ref|YP_003834705.1| CoA-binding domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|302568927|gb|ADL45129.1| CoA-binding domain protein [Micromonospora aurantiaca ATCC 27029] Length = 851 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 45/276 (16%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 +HP + +P + + A+A + + +V+ VPP D + ++ A +V Sbjct: 232 VHPSASTV------AGLPAYPSAADAGQDV--DLAVVAVPPDAVTDVVHDAARAGAHGLV 283 Query: 100 CITEGIP-------VLDMVRVKARLEKSSSRLIGPNCPGILTPD-SCKIG-----IMPGS 146 I+ G V+A + R++GPNC G+ D + ++ ++P + Sbjct: 284 VISAGFAESGPAGAAAQRALVRA-AHLAGMRVVGPNCLGVANTDPAVRLNATLAPVLPAA 342 Query: 147 IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP-VKGTEFIDVLELFLADEA 205 G VG+ S+SG + + S+ GLG S+ V G V G D+L+ + D A Sbjct: 343 ----GRVGVFSQSGAFGVALLAEASRRGLGLSSFVSAGNRADVSGN---DLLQYWQDDPA 395 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK 265 T+ I + E G+ +F + + GR+KP+V A PPG +G A A+ + Sbjct: 396 TDVITLYLETFGNPR----KFARLARRIGRRKPVVAL-ASLARPPG--VGDAPALDAAAV 448 Query: 266 GG--------AEDKINAMKEAGICIAPSPARIGRSL 293 D ++ + + G+ +A P GR + Sbjct: 449 SALFAQSGVIRVDTVSELLDVGVLLAHQPLPAGRRV 484 >gi|300123828|emb|CBK25099.2| unnamed protein product [Blastocystis hominis] Length = 905 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 67/236 (28%), Positives = 109/236 (46%), Gaps = 27/236 (11%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 + + T+ + E+ + +VI +P A+ E EA + I+ I+ G ++ + A Sbjct: 77 IKAYKTIGDVPEQV--DLAVICIPAKRVLGAVHECGEAGVRGIIIISAGFK--EVGKEGA 132 Query: 116 RLEKSS--------SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 LEK+ R+IGPNC G + P + ++ KG V +S+SG L + Sbjct: 133 ALEKACVEEAHKYGMRIIGPNCLGAMVPITGLNASFASTMALKGEVAFISQSGALMCAML 192 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + +EGLG S V IG + + D++ F D T++I++ E G +A FL Sbjct: 193 DWSLKEGLGFSAFVSIGS--MADVNWGDLIYYFGNDPNTKAIMIYMETIG----DARSFL 246 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS--GGKGGAEDKIN-AMKEAGI 280 + +KPIV PGRT A A S G G++D + A K+AG+ Sbjct: 247 SAAREVALRKPIV------VIKPGRTAAAAAAAASHTGSLTGSDDVLTAAFKKAGV 296 >gi|269987073|gb|EEZ93347.1| CoA-binding domain protein [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 683 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 16/196 (8%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL------DMVR 112 + +V KE+ + ++I +P + E +A+IPL V ++ G + Sbjct: 56 YKSVLSVKEKI--DVAIIAIPAQMVLSTLKECEKAKIPLAVILSAGFNEIGGEGAKREEE 113 Query: 113 VKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 ++ L K+ R+IGPNC GI+ P + P S KG+ G +S+SG L V Sbjct: 114 IRKFLSKAKIRIIGPNCLGIINTDPSFNATFLDPNSRVIKGNAGFISQSGALLSAVVDDA 173 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 S +G S + IG D++E F DE T+ + + E FLK Sbjct: 174 STNNIGFSKIISIGN--ATDISEADIIESFKTDEKTKVLALYLE----GLNNGKDFLKAG 227 Query: 231 AKRGRKKPIVGFVAGK 246 ++KP++ GK Sbjct: 228 MSFSQEKPLLILKGGK 243 >gi|62199504|gb|AAX76834.1| ATP citrate lyase alpha subunit [Sulfurimonas denitrificans] Length = 339 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 8/109 (7%) Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPI 239 + IGGD G+ FID L A+ + ++++GE+GG+ E + + K G+ KKPI Sbjct: 2 IAIGGDRFVGSVFIDNLLRMEANPEVKYMLLLGEVGGTEEYKVIE----AVKSGKIKKPI 57 Query: 240 VGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + + G K G GHAGA +G AE K AMKE GI + S Sbjct: 58 IAWCIGTIAKYYDSGVQFGHAGASANGDMETAEAKNRAMKEVGIHVPAS 106 >gi|316935761|ref|YP_004110743.1| GCN5-like N-acetyltransferase [Rhodopseudomonas palustris DX-1] gi|315603475|gb|ADU46010.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris DX-1] Length = 907 Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 11/165 (6%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 KS RLIGPNC GI+ P + + R+G++ ++S+SG + V + + +G Sbjct: 120 RKSGIRLIGPNCLGIMIPGANLNASFAAHMPRRGNLALISQSGAIAAGMVDWAAVKEIGF 179 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V IG + D+L+ + AD T +I++ E A +A +F+ R K Sbjct: 180 SGIVSIGDQ--LDVDIADMLDFYAADLETRAILLYIE----AVTDARKFMSAARAAARVK 233 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGIC 281 P+V +G+ A + A A +G GA+ A + AG+ Sbjct: 234 PVVVVKSGRMAHGAK----AAATHTGAFAGADAVYEAAFRRAGML 274 >gi|158333635|ref|YP_001514807.1| Acetyl-CoA synthetase [Acaryochloris marina MBIC11017] gi|158303876|gb|ABW25493.1| Acetyl-CoA synthetase, putative [Acaryochloris marina MBIC11017] Length = 917 Score = 55.5 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 24/241 (9%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 ++PK+ S + + +T + E+ + +VI +P A+ + I+A + + Sbjct: 62 VNPKRSSV------LGIKAYTDILSIPEQI--DLAVIAIPAPRVLSAVQQCIQAGVRGAI 113 Query: 100 CITEGIPVLDMVRVKARLE------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSV 153 I+ G + + E + + R+IGPNC G++ P ++ R G+V Sbjct: 114 IISAGFKEIGEAGQQLEQEILQTARQGNLRIIGPNCLGLMCPPYGLNTTFASTMARPGNV 173 Query: 154 GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVG 213 G LS+SG L + + +E +G S V IG + + D++ D T SIV+ Sbjct: 174 GFLSQSGALCTSILDWSLRENVGFSAFVSIGS--MLDISWGDLIYHLGDDPHTHSIVIYM 231 Query: 214 EIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN 273 E G +A FL + KPI+ G+T + A A +G G++D ++ Sbjct: 232 EAIG----DARSFLSAAREVALSKPIIVIKGGRTQEAAK----AAASHTGSLMGSDDVLD 283 Query: 274 A 274 A Sbjct: 284 A 284 >gi|124266204|ref|YP_001020208.1| acyl-CoA synthetase [Methylibium petroleiphilum PM1] gi|124258979|gb|ABM93973.1| acyl-CoA synthetase (ADP forming) [Methylibium petroleiphilum PM1] Length = 918 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 108/242 (44%), Gaps = 23/242 (9%) Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AE + T A+ +VI +PP A+ + + ++ GI +K ++ Sbjct: 80 TLAELAQ-TRADLAVIALPPQQVASALEVAGRLACRSALVVSSGIGAEAAATLKKIAQRE 138 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 L+GPN G P G + + GS+ ++S+SG LT + S +G S+ Sbjct: 139 GIHLLGPNGLGFQRPALQLNASAAGPLAKPGSLALVSQSGALTTSVLDWASTNAVGFSSV 198 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 V +G P + VL+ D T SIV+ E G S+ L+ AK KP+V Sbjct: 199 VSLG--PNTSVDIAQVLDYLANDAQTHSIVVYVE-GISSARHFMSALRSAAK---AKPVV 252 Query: 241 GFVAGKTAPPGRTMG--HAGAVISGGKGGAEDKIN-AMKEAGICIAPSPARIGRSLVELL 297 AG+ P G H+GA++ G++D + A++ AG R+ RS VEL Sbjct: 253 VLKAGRK-PAGNEAAQTHSGAIV-----GSDDVFDAALRRAGAV------RV-RSFVELF 299 Query: 298 GS 299 + Sbjct: 300 SA 301 >gi|305663979|ref|YP_003860267.1| branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit ;acetyl-CoA synthetase (ADP-forming) alpha subunit [Ignisphaera aggregans DSM 17230] gi|304378548|gb|ADM28387.1| branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit ;acetyl-CoA synthetase (ADP-forming) alpha subunit [Ignisphaera aggregans DSM 17230] Length = 463 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 15/217 (6%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA----RLEKSSSRLIGP 127 + +V+ VP D I ++ +A + V I+ G + V ++ R K R++GP Sbjct: 69 DVAVVSVPAKNVLDVIDDAGKAGVKFAVVISSGFKEVGNVELEEELVRRAHKYGIRVLGP 128 Query: 128 NCPG-ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 N G + TP P + G+V +S+SG L + T E +G S+ V IG Sbjct: 129 NIFGYVYTPSRINASFGPRDVI-PGNVAFISQSGALGIALMGTTILENIGVSSIVSIGNK 187 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 E D LE F D T I++ E + +F++ + KKPI+ +G+ Sbjct: 188 --ADLEDADFLEFFENDPNTSVILLYIE----GVRDGRRFIEIAGRVSLKKPIIAIKSGR 241 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 T + ++GG E A+K+AGI A Sbjct: 242 TEAGAKAAASHTGSLAGGPVIWE---TALKQAGILFA 275 >gi|86607739|ref|YP_476501.1| acetyl coenzyme A synthetase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556281|gb|ABD01238.1| putative acetyl coenzyme A synthetase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 928 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 6/125 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPNC GI P + + R G+VG +S+SG L + + QE +G S + Sbjct: 148 RLIGPNCLGIQNPHTGLNATFAAQMARPGNVGFISQSGALCTSILDWSLQENVGFSAFIS 207 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + D+++ D T SIV+ E G +A FL + KPI+ Sbjct: 208 LGS--MLDVGWGDLIDYLGEDPHTHSIVLYMESIG----DARSFLSAAREVALSKPIIVI 261 Query: 243 VAGKT 247 AG+T Sbjct: 262 KAGRT 266 >gi|14521495|ref|NP_126971.1| hypothetical protein PAB0854 [Pyrococcus abyssi GE5] gi|5458714|emb|CAB50201.1| acdA-3 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain [Pyrococcus abyssi GE5] Length = 457 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 22/221 (9%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD---------MVRVKARLEKSSS 122 + ++I VP D +I+ E + +V IT G +V + R Sbjct: 66 DLAIIVVPKKFVKDTLIQCGEKGVKGVVIITAGFGETGEEGKKEEKELVEIAHRY---GM 122 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R+IGPNC GI+ + + ++ +KG+V +S+SG L V++T +E +G S + Sbjct: 123 RIIGPNCVGIMNTHA-DLNATFITVAKKGNVAFISQSGALGAGIVYKTIKEDIGFSKFIS 181 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + +F +++E E ++I + E +F++ + +KKP++ Sbjct: 182 VGN--MADLDFAELMEYLADTEEDKAIALYIE----GIRNGRKFIEVAKRVTKKKPVIAL 235 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 AGK+ R ++G E A K++G+ +A Sbjct: 236 KAGKSESGARAASSHTGSLAGSWKIYE---AAFKQSGVLVA 273 >gi|119897952|ref|YP_933165.1| hypothetical protein azo1661 [Azoarcus sp. BH72] gi|119670365|emb|CAL94278.1| conserved hypothetical protein [Azoarcus sp. BH72] Length = 895 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + RL+GPNC GI+ P+ + KGS+G++S+SG L + +G Sbjct: 124 RRHKIRLLGPNCLGIMRPELGLNATFAHASAVKGSIGLISQSGALCAAILDWAKPNNVGF 183 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V +G +F ++LE ++D TESI + E +A +F+ R K Sbjct: 184 SAVVSLGTS--SDIDFGEILEFMISDPRTESIFLYVE----GIRDARRFMSALRGAARVK 237 Query: 238 PIVGFVAGKTAPPGRT-MGHAGAVISGGKGGAEDKINAMKEAGI 280 P++ G+ R + H GA I G D A++ AG+ Sbjct: 238 PVLLVKVGRHPDVSRAILSHTGAPI--GDDAVFDA--ALRRAGV 277 >gi|261884696|ref|ZP_06008735.1| succinyl-CoA synthetase, alpha subunit [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 42 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/39 (69%), Positives = 30/39 (76%), Gaps = 1/39 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGG 39 MSILVDKNTKV+VQG TGK TFH EQ + Y T +VGG Sbjct: 1 MSILVDKNTKVIVQGFTGKEATFHAEQCLAY-GTNIVGG 38 >gi|47198820|emb|CAF88047.1| unnamed protein product [Tetraodon nigroviridis] Length = 328 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 76/192 (39%), Gaps = 31/192 (16%) Query: 43 KKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCIT 102 K YW + +PV+ ++EA ++ +I I I Sbjct: 109 HKQKFYWGHKEILIPVYKNMSEAMKK-----------------------HPDIHTIAIIA 145 Query: 103 EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVG 154 EGIP ++ ++ +IGP G + P KIG I+ ++R GSV Sbjct: 146 EGIPEAFTRKIIKAADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVA 205 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 +SRSG ++ E S+ G V IGGD G+ F D + + E IV++GE Sbjct: 206 YVSRSGGMSNELNNIISRTTDGVFEGVAIGGDRYPGSVFTDHVLRYQDTPGVEMIVVLGE 265 Query: 215 IGGSAEEEAAQF 226 + + F Sbjct: 266 VSNRQHADPCCF 277 >gi|282895347|ref|ZP_06303548.1| GCN5-related N-acetyltransferase [Raphidiopsis brookii D9] gi|281199598|gb|EFA74459.1| GCN5-related N-acetyltransferase [Raphidiopsis brookii D9] Length = 993 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 6/125 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R+IGPNC G++ P S I + GSVG LS+SG L + + QE +G S V Sbjct: 217 RIIGPNCLGMMNPISGLNATFASKIAQPGSVGFLSQSGALCTSILDWSLQENVGFSAFVS 276 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + D++ D T+SIV+ E G+A FL + KPI+ Sbjct: 277 LGS--MLDISWGDLIYYLGDDPHTKSIVIYMESIGNAR----SFLSAAREVTLTKPIIVI 330 Query: 243 VAGKT 247 AG+T Sbjct: 331 KAGRT 335 >gi|70953624|ref|XP_745901.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56526366|emb|CAH74294.1| hypothetical protein PC000023.00.0 [Plasmodium chabaudi chabaudi] Length = 287 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 6/134 (4%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +K++ R+IGPNC GI+ S KG +LS+SG + A+ + Q +G Sbjct: 154 KKNNIRIIGPNCLGIIHSYHNMNASFADSDILKGHFSLLSQSGAICSAALDLSLQHNIGF 213 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S + +G + +F +++E D+ T+ I++ E G + +F++ + K Sbjct: 214 SHFISVGS--MCDVQFYELIEYLFYDDNTKYILLYVESIGDMD----RFMETCKRICLYK 267 Query: 238 PIVGFVAGKTAPPG 251 PI+ +GKTA Sbjct: 268 PIIVLKSGKTAKAA 281 >gi|291570715|dbj|BAI92987.1| acetyl-CoA synthetase [Arthrospira platensis NIES-39] Length = 916 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 32/269 (11%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 I+PK+ + + + + ++ E E + ++I P D + + +EA + + Sbjct: 64 INPKRSNV------LGIKAYPSIGEVPE--TVDLAIIITPAPTVPDIVRQCVEAGVKGAI 115 Query: 100 CIT--------EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 ++ +G+ + + AR +S R+IGPNC G++ P + ++ G Sbjct: 116 ILSAGFKEIGPKGVELEQQILEYAR--QSRMRIIGPNCLGLMNPLTGLNATFASAMAIPG 173 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 SVG +S+SG L + + QE +G S V +G + + D++ D T+SIV+ Sbjct: 174 SVGFISQSGALCTSILDWSFQENVGFSAFVSVGS--MLDVGWGDLIYHLGNDPNTKSIVI 231 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT-APPGRTMGHAGAVISGGKGGAED 270 E G +A FL + KPI+ AG+T A H GA+ G++D Sbjct: 232 YMESIG----DARSFLSAAREVALTKPIIVIKAGRTEAAAKAAASHTGAL-----AGSDD 282 Query: 271 KIN-AMKEAGICIAPSPARIGRSLVELLG 298 ++ A + G+ A + SL ELLG Sbjct: 283 VLDAAFRRCGVLRVYHIAHLF-SLSELLG 310 >gi|268317337|ref|YP_003291056.1| acetyl coenzyme A synthetase (ADP forming), alpha domain-containing protein [Rhodothermus marinus DSM 4252] gi|262334871|gb|ACY48668.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Rhodothermus marinus DSM 4252] Length = 929 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 7/139 (5%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R+IGPNC G++ P + ++ R G+VG +S+SG L + + +E +G S + Sbjct: 146 RIIGPNCLGVMRPVTGLNATFASTMARPGTVGFISQSGALLTSILDWSLEENVGFSAFIS 205 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IG + + D++ +D T+SI++ E G +A FL + +KPI+ Sbjct: 206 IGS--MLDVGWGDLIYYLGSDPYTKSIILYMESIG----DARSFLSAAREVALQKPIIVI 259 Query: 243 VAGKTAPPGR-TMGHAGAV 260 AG+T R + H G++ Sbjct: 260 KAGRTEEAARAALSHTGSL 278 >gi|115523752|ref|YP_780663.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris BisA53] gi|115517699|gb|ABJ05683.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris BisA53] Length = 902 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 6/129 (4%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 K RLIGPNC G++ P SC + ++G + ++S+SG + V +++ +G Sbjct: 120 RKHGLRLIGPNCLGVIVPGSCLNASFAAHMPKEGHLALISQSGAIAAGMVDWAAEKSIGF 179 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V IG + D+L+ F D T +I++ E + +A +F+ R K Sbjct: 180 SGLVSIGEQ--LDVDIADLLDHFALDYKTRAILLYVE----SITDARKFMSAARAAARVK 233 Query: 238 PIVGFVAGK 246 P+V +G+ Sbjct: 234 PVVVVKSGR 242 >gi|284051327|ref|ZP_06381537.1| CoA-binding domain protein [Arthrospira platensis str. Paraca] Length = 916 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 32/269 (11%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 I+PK+ + + + + ++ E E + ++I P D + + +EA + + Sbjct: 64 INPKRSNV------LGIKAYPSIGEVPE--TVDLAIIITPAPTVPDIVRQCVEAGVKGAI 115 Query: 100 CIT--------EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 ++ +G+ + + AR +S R+IGPNC G++ P + ++ G Sbjct: 116 ILSAGFKEIGPKGVELEQQILEYAR--QSRMRIIGPNCLGLMNPLTGLNATFASAMAIPG 173 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 SVG +S+SG L + + QE +G S V +G + + D++ D T+SIV+ Sbjct: 174 SVGFISQSGALCTSILDWSFQENVGFSAFVSVGS--MLDVGWGDLIYHLGNDPNTKSIVI 231 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT-APPGRTMGHAGAVISGGKGGAED 270 E G +A FL + KPI+ AG+T A H GA+ G++D Sbjct: 232 YMESIG----DARSFLSAAREVALTKPIIVIKAGRTEAAAKAAASHTGAL-----AGSDD 282 Query: 271 KIN-AMKEAGICIAPSPARIGRSLVELLG 298 ++ A + G+ A + SL ELLG Sbjct: 283 VLDAAFRRCGVLRVYHIAHLF-SLSELLG 310 >gi|86748496|ref|YP_484992.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris HaA2] gi|86571524|gb|ABD06081.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris HaA2] Length = 907 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 16/155 (10%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 KS RLIGPNC GI+ P S + R+G + ++S+SG + V + + +G Sbjct: 120 RKSGIRLIGPNCLGIMVPGSNLNASFAAHMPRRGHLALISQSGAIAAGMVDWAAVKNIGF 179 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V IG + D+L+ + D T +I++ E A +A +F+ R K Sbjct: 180 SGIVSIGDQ--LDVDIADMLDYYAGDIETRAILLYIE----AVTDARKFMSAARAAARVK 233 Query: 238 PIVGFVAGKTAPPGRTMGH---AGAVISGGKGGAE 269 P+V +G+ M H A A +G GA+ Sbjct: 234 PVVVVKSGR-------MAHGALAAATHTGALAGAD 261 >gi|198411693|ref|XP_002120517.1| PREDICTED: similar to ATP citrate-lyase, partial [Ciona intestinalis] Length = 199 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 16/199 (8%) Query: 4 LVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 + T+ ++ GL +A G + V ++P K YW + +P Sbjct: 1 MFTNKTRCIIWGLQSRAVQGMMDFDFVCSRKTPSVAAMVYPFSGDHKQKFYWGHKEILIP 60 Query: 58 VFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +++A + + A+ + + A ++ I++++ +I I I EGIP ++ Sbjct: 61 VYKNMSDAMHKHSDADVMISFASLRSAEESTIDTLQYQQIRTIAIIAEGIPEATTKKLNK 120 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 121 LAREKNVSIIGPATVGGIKPGCFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 180 Query: 168 FQTSQEGLGQSTAVGIGGD 186 S+ G V IGGD Sbjct: 181 NIISRTTNGVCEGVAIGGD 199 >gi|261403430|ref|YP_003247654.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanocaldococcus vulcanius M7] gi|261370423|gb|ACX73172.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanocaldococcus vulcanius M7] Length = 700 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 16/175 (9%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQT 170 ++K ++ + R+IGPNC GI+ + +F KG V I+S+SG + + Sbjct: 110 KIKEIAKRYNIRIIGPNCLGIMNT-HINLNATFAKVFPPKGGVSIISQSGAVLNAILDIA 168 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 +G S V IG + D++E FL DE T+ +V+ I G ++ +FL Sbjct: 169 PLLNIGFSKVVSIGNKV--DVQESDLMEYFLNDEDTKMVVLY--IEGLKDK---RFLNVA 221 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN--AMKEAGICIA 283 K +KKPI+ +G+T +G A G ED+I KE+GI A Sbjct: 222 KKLSKKKPIIALKSGRT-----DVGKKAAKSHTGSLAGEDEIYEAVFKESGIVRA 271 >gi|126180267|ref|YP_001048232.1| CoA-binding domain-containing protein [Methanoculleus marisnigri JR1] gi|125863061|gb|ABN58250.1| CoA-binding domain protein [Methanoculleus marisnigri JR1] Length = 707 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 14/190 (7%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 +V A + R+IGPNC GI+ P R G V +S+SG + V + Sbjct: 367 KVTAIARRHGIRIIGPNCLGIMMPHMGINATFDPVSPRPGDVAFISQSGAIITTVVDWSL 426 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM-VGEIGGSAEEEAAQFLKDE 230 E G ST + +G G E L DE T S+ + V EI ++ F++ Sbjct: 427 PEEFGFSTVISVGNQADLGFEHF--LRFAEQDEKTRSVTLYVEEI-----QDGRGFMQIV 479 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED-KINAMKEAGICIAPSPARI 289 + ++KP+V +G + R A + +G G+ D + A ++AG+ +A S R Sbjct: 480 GEVAKRKPVVAVKSGSS----RKGRAAASSHTGSLAGSYDVYVAAFRQAGVIVARS-LRD 534 Query: 290 GRSLVELLGS 299 +L ELL S Sbjct: 535 AFNLAELLAS 544 >gi|282901587|ref|ZP_06309506.1| GCN5-related N-acetyltransferase [Cylindrospermopsis raciborskii CS-505] gi|281193513|gb|EFA68491.1| GCN5-related N-acetyltransferase [Cylindrospermopsis raciborskii CS-505] Length = 922 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 6/125 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R+IGPNC G++ P S + + GSVG LS+SG L + + QE +G S V Sbjct: 146 RIIGPNCLGMMNPISGLNATFASKMAQPGSVGFLSQSGALCTSILDWSLQENVGFSAFVS 205 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + D++ D T+SIV+ E G+A FL + KPI+ Sbjct: 206 LGS--MLDISWGDLIYYLGDDPHTKSIVIYMESIGNAR----SFLSAAREVALTKPIIVI 259 Query: 243 VAGKT 247 AG+T Sbjct: 260 KAGRT 264 >gi|254423179|ref|ZP_05036897.1| acetyltransferase, GNAT family [Synechococcus sp. PCC 7335] gi|196190668|gb|EDX85632.1| acetyltransferase, GNAT family [Synechococcus sp. PCC 7335] Length = 926 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 12/141 (8%) Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 +L +VR S RLIGPNC G++ P G +I G+VG +S+SG L Sbjct: 135 ILSLVRA------SGMRLIGPNCLGVMNPHVGFNGTFASAIANPGNVGFISQSGALCTSI 188 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + +E +G S V +G + + D++ D T+SIV+ E G+A F Sbjct: 189 LDWSFRENVGFSAFVSVGS--MLDVGWGDLINYLGDDPKTDSIVIYMESIGNARA----F 242 Query: 227 LKDEAKRGRKKPIVGFVAGKT 247 L + KPI+ AG+T Sbjct: 243 LSAAREVAFTKPIIVIKAGRT 263 >gi|39937300|ref|NP_949576.1| GCN5-like N-acetyltransferase [Rhodopseudomonas palustris CGA009] gi|192293080|ref|YP_001993685.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris TIE-1] gi|39651158|emb|CAE29681.1| GCN5-related N-acetyltransferase:CoA Binding Domain [Rhodopseudomonas palustris CGA009] gi|192286829|gb|ACF03210.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris TIE-1] Length = 907 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 11/165 (6%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 KS RLIGPNC GI+ P + R+G++ ++S+SG + V + + +G Sbjct: 120 RKSGIRLIGPNCLGIMIPGVNLNASFAAHMPRRGNLALISQSGAIAAGMVDWAAVKEIGF 179 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V IG + D+L+ + AD T +I++ E A +A +F+ R K Sbjct: 180 SGIVSIGDQ--LDVDIADMLDFYAADLDTRAILLYIE----AVTDARKFMSAARAAARVK 233 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGIC 281 P+V +G+ A + A A +G GA+ A + AG+ Sbjct: 234 PVVVVKSGRMAHGAK----AAATHTGAFAGADAVYEAAFRRAGML 274 >gi|296241887|ref|YP_003649374.1| CoA-binding domain-containing protein [Thermosphaera aggregans DSM 11486] gi|296094471|gb|ADG90422.1| CoA-binding domain protein [Thermosphaera aggregans DSM 11486] Length = 459 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 8/141 (5%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDS-CKIGIMPGSIFR---KGSVGILSRSGTLTYEAV 167 +VK K R+IGPNC GI S +P + KG VG +S+SG + Sbjct: 113 KVKEIAAKYGIRIIGPNCIGIFDNWSGVDTFFLPEEKMKRPPKGYVGFISQSGAFASAII 172 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + +G S AV G + +D+L+ F++DE T+ ++M E G +F+ Sbjct: 173 DWMAYNNIGVSRAVSYGNK--VDVDDVDLLKFFMSDEKTKIVLMYLE--GLKTSRGKEFI 228 Query: 228 KDEAKRGRKKPIVGFVAGKTA 248 K + + KP V + AGKT+ Sbjct: 229 KVARELVKVKPAVIYKAGKTS 249 >gi|115374715|ref|ZP_01461992.1| acetyltransferase, gnat family [Stigmatella aurantiaca DW4/3-1] gi|310822736|ref|YP_003955094.1| acetyl-CoA synthetase [Stigmatella aurantiaca DW4/3-1] gi|115368286|gb|EAU67244.1| acetyltransferase, gnat family [Stigmatella aurantiaca DW4/3-1] gi|309395808|gb|ADO73267.1| Acetyl-CoA synthetase [Stigmatella aurantiaca DW4/3-1] Length = 911 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 11/165 (6%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 K R+IGPNC G++ P + G++ R G+V +S+SG L + + +E +G Sbjct: 139 RKGRMRIIGPNCLGLMRPTTGLNATFAGAMARPGNVAFISQSGALLTAILDWSQRETVGF 198 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V +G + + D+++ D T SI++ E G +A FL + +K Sbjct: 199 SAFVSLGS--MLDVGWGDLIDYLGNDPRTRSILLYMESIG----DARAFLSAAREVALQK 252 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGIC 281 PI+ AG+T A A +G G+++ + A + AG+ Sbjct: 253 PIIVIKAGRT----EQAAKAAASHTGTLAGSDEVLTAAFRRAGVL 293 >gi|94970033|ref|YP_592081.1| CoA-binding protein [Candidatus Koribacter versatilis Ellin345] gi|94552083|gb|ABF42007.1| CoA-binding protein [Candidatus Koribacter versatilis Ellin345] Length = 912 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 6/133 (4%) Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 +R+ + R+IGPNC G++ P +I R G+V +S+SG L + + +E Sbjct: 138 SRIIRGKMRIIGPNCLGVMNPIKGLNATFANTIARPGNVAFISQSGALCTAVLDWSLKEN 197 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G S+ V IG + ++ D++ D T +IV+ E G+A FL + Sbjct: 198 VGFSSFVSIGS--MLDVDWGDLISYLGNDPRTHAIVIYMESIGNAR----SFLSAAREVS 251 Query: 235 RKKPIVGFVAGKT 247 KPI+ AG+T Sbjct: 252 LTKPIIVIKAGRT 264 >gi|254417269|ref|ZP_05031013.1| acetyltransferase, GNAT family [Microcoleus chthonoplastes PCC 7420] gi|196175922|gb|EDX70942.1| acetyltransferase, GNAT family [Microcoleus chthonoplastes PCC 7420] Length = 913 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 10/152 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R+IGPNC G+++P S ++ R G++ +S+SG L + + E +G S + Sbjct: 144 RIIGPNCLGLMSPRSGLNATFASTMARPGNLAFISQSGALCTAVLDWSFWENVGFSAFIS 203 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IG + + D++ D T SIV+ E G +A FL + KPI+ Sbjct: 204 IGS--MMDVNWGDLIYYLGDDPHTHSIVIYMESIG----DARSFLSAAREVALTKPIIVI 257 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 G+T + A A +G G++D ++A Sbjct: 258 KTGRTEAAAK----ASASHTGSLAGSDDVLDA 285 >gi|108762179|ref|YP_632744.1| acetyltransferase [Myxococcus xanthus DK 1622] gi|108466059|gb|ABF91244.1| acetyltransferase, GNAT family [Myxococcus xanthus DK 1622] Length = 916 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 7/133 (5%) Query: 116 RLEKSSS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 RL +++ R+IGPNC G++ P S G++ R G+V +S+SG L + + +E Sbjct: 145 RLAQAAQVRIIGPNCLGVMRPPSGFNATFAGAMARPGNVAFISQSGALLTSILDWSLREA 204 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G S V +G + + D+++ D T SI++ E G +A FL + Sbjct: 205 VGFSAFVSVGS--MLDVGWGDLIDFLADDPMTRSILLYMESIG----DARAFLSAAREVA 258 Query: 235 RKKPIVGFVAGKT 247 KPI+ AG+T Sbjct: 259 LTKPIIVIKAGRT 271 >gi|167044574|gb|ABZ09247.1| putative CoA-binding domain protein [uncultured marine crenarchaeote HF4000_APKG7F11] Length = 640 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 21/161 (13%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK-----GSVGILSRSGTLTYEA 166 ++K K ++IGPNC G++ D M S F K G + ++S+SG + Sbjct: 113 KLKEIATKYDVKVIGPNCLGVMNLDP---KTMMNSTFLKITPKSGQIALVSQSGAICAAL 169 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 V S +G+G S V + G+ TE IDVL++ E T+ IVM E G+ +E F Sbjct: 170 VEDASAQGIGFSAVVSM-GNKADMTE-IDVLKMLADHEQTKVIVMYLEDIGNGQE----F 223 Query: 227 LKDEAKRGR----KKPIVGFVAGKTAPPG--RTMGHAGAVI 261 LK + + KKP++ AG++ P G M H GA++ Sbjct: 224 LKVCKQITKYNEIKKPVLVLKAGRS-PEGAKAAMSHTGALM 263 >gi|307353320|ref|YP_003894371.1| CoA-binding domain-containing protein [Methanoplanus petrolearius DSM 11571] gi|307156553|gb|ADN35933.1| CoA-binding domain protein [Methanoplanus petrolearius DSM 11571] Length = 690 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/267 (22%), Positives = 114/267 (42%), Gaps = 36/267 (13%) Query: 28 AILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAI 87 A+++ G I+P G P +++ + + +VI VP + Sbjct: 257 AVMHNLLHFPGQIYPVNNKRSEVQGLKAFPTVSSIP-----SPVDLAVITVPALQVPKIM 311 Query: 88 IESIEAEIPLIVCIT--------EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP---- 135 E E IPL+V IT EG + D + AR + R++GPNC G++ P Sbjct: 312 QECGEKGIPLVVVITAGFKETGTEGKALEDRMLEIAR--SYNIRIVGPNCLGLIIPPRGL 369 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 D+ + P S G + +S+SG + V + + +G S +G +FID Sbjct: 370 DTTYVHESPDS----GGIAFISQSGAIINTVVDWSLKNDIGFSAVFSVGNQ--SDLDFID 423 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 L D+ T+++++ E + +F++ ++ +KKP++ +G + + G Sbjct: 424 YLRFVEQDKNTKAVILYVE----QLTDGREFMEVVSEVAKKKPVIAIKSGSS-----SKG 474 Query: 256 HAGAVISGG--KGGAEDKINAMKEAGI 280 A A G G E + A +++G+ Sbjct: 475 QAAASSHTGSLSGSYEVYMEAFRKSGV 501 >gi|325965303|ref|YP_004243208.1| acyl-CoA synthetase (NDP forming) [Arthrobacter phenanthrenivorans Sphe3] gi|323471390|gb|ADX75074.1| acyl-CoA synthetase (NDP forming) [Arthrobacter phenanthrenivorans Sphe3] Length = 677 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 16/175 (9%) Query: 112 RVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPG-SIFRKGSVGILSRSGTLTYEAVFQ 169 +VK + + RL+GPN G P + + +PG + GSV +++ SG + + F Sbjct: 113 QVKDAVRDTGIRLLGPNTSGFFVPGRNLRASFVPGVAELEPGSVAVVAASGGVNHVLAFH 172 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFI--DVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + G G S AVGIG GT+ DVL+ + D+ T+++ + E + + Sbjct: 173 LQRSGAGVSLAVGIGA----GTDITAPDVLDYLITDQQTKAVALHLE----TVSDGPALI 224 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 ++ KP+V V G+ H GA+ + + + +K+AG I Sbjct: 225 DAVSRLSAVKPVVALVVGRNDVSEFAQSHTGALATSWR----TTRSVLKQAGAVI 275 >gi|271967931|ref|YP_003342127.1| succinyl-CoA synthetase subunit alpha [Streptosporangium roseum DSM 43021] gi|270511106|gb|ACZ89384.1| putative enzyme, putative succinyl-CoA synthetase, alpha subunit [Streptosporangium roseum DSM 43021] Length = 492 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 8/156 (5%) Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A AA +++ VP A +++IEA + +++ ++ +PV V +K R + Sbjct: 105 TVRTAARGRAATLALVSVPGEHAFAEAMDAIEAGLSVMI-FSDNVPVEQEVLLKRRAGER 163 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++GP+C G +G ++ R G VG+++ SGT + Q G+G S Sbjct: 164 GVLVMGPDC-GTAVIAGAGLGF--ANVLRPGPVGLVAASGTGAQQVSCLLDQAGVGVSHV 220 Query: 181 VGIGG----DPVKGTEFIDVLELFLADEATESIVMV 212 +G+GG + V G + LE AD ATE IV+V Sbjct: 221 LGVGGRDLSEEVGGLSTLRALEALDADPATELIVLV 256 >gi|269926006|ref|YP_003322629.1| CoA-binding domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269789666|gb|ACZ41807.1| CoA-binding domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 915 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 24/189 (12%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI------------PVLDMVRVKARLE 118 A+ +VI PP I E + I + ++ G +LD+ R Sbjct: 87 ADMAVIATPPQTVPQVISECSQVGIKGAIILSAGFRERGEEGKKLESEILDIART----- 141 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S R+IGPNC GI+ P + SI + GSVG +S+SG L + + +E +G S Sbjct: 142 -SGMRIIGPNCLGIMRPPTGLNATFAASIAKPGSVGFISQSGALCTAILDWSLRENVGFS 200 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + IG + + D++ D T SI++ E G +A FL + KP Sbjct: 201 AFISIGS--MLDISWSDLIYYLGDDPHTNSILLYIESVG----DARSFLSAVREIALTKP 254 Query: 239 IVGFVAGKT 247 ++ AG+T Sbjct: 255 VIIVKAGRT 263 >gi|56479337|ref|YP_160926.1| acyl-CoA synthetase (ADP forming) [Aromatoleum aromaticum EbN1] gi|56315380|emb|CAI10025.1| Acyl-CoA synthetase (ADP forming) [Aromatoleum aromaticum EbN1] Length = 895 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 11/159 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RL+GPNC GI+ P KG++G++S+SG L + +G S V Sbjct: 129 RLLGPNCLGIMRPVLGLNATFAHVSAIKGTIGLISQSGALCTSILDWAEPNNIGFSAVVS 188 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G +F +VLE ++D TESI+M E +A +F+ R KP++ Sbjct: 189 LGSS--SDIDFGEVLEYMISDPRTESIIMYVE----GIRDARRFMSALRGAARVKPVLLI 242 Query: 243 VAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGI 280 G+ R + H+G++ G D A++ AG+ Sbjct: 243 KVGRHPDVSRAIRSHSGSM--SGNDAVFDA--ALRRAGV 277 >gi|87308769|ref|ZP_01090908.1| GCN5-related N-acetyltransferase [Blastopirellula marina DSM 3645] gi|87288480|gb|EAQ80375.1| GCN5-related N-acetyltransferase [Blastopirellula marina DSM 3645] Length = 895 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R+IGPNC G+++ S G VG +S+SG L + + Q+ +G S + Sbjct: 129 RIIGPNCLGVMSTSVHLNASFAASSPLPGRVGFISQSGALCTSVLDWSLQKNIGFSHFIS 188 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + D+++ D T+SI++ E + E+ +F+ R+KPI+ + Sbjct: 189 VGN--MLDVQIGDLIDYMANDPHTDSIILYVE----SISESREFMSAARAFARQKPIIAY 242 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 AG+ A + ++G E A K AGI Sbjct: 243 KAGRFAESAQAAASHTGALAGVDAVYE---AAFKRAGI 277 >gi|170289657|ref|YP_001736473.1| Acyl-CoA synthetase (NDP forming) [Candidatus Korarchaeum cryptofilum OPF8] gi|170173737|gb|ACB06790.1| Acyl-CoA synthetase (NDP forming) [Candidatus Korarchaeum cryptofilum OPF8] Length = 459 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 123 RLIGPNCPGILTP-DSCKIGIMPGSIFRK---GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R+IGPNC GI P D +P + + G + ++++SG+L + +EG+G S Sbjct: 123 RVIGPNCLGIFDPKDKIDTLFLPERVIPRPGEGKIAVITQSGSLGSTVLTMMRKEGMGIS 182 Query: 179 TAVGIGG--DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 V G D +G ++LE + DE T+ I E + + +F++ + R+ Sbjct: 183 KFVSYGNRADVDEG----ELLEYLMEDEDTQVIAAYIE----SVADGRKFMESMRRASRR 234 Query: 237 KPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAG 279 KP+V GKT+ R + H G++ G +E +A+K++G Sbjct: 235 KPVVVLKGGKTSSGDRAVRSHTGSM----AGSSEIFHSAVKQSG 274 >gi|260220634|emb|CBA28370.1| hypothetical protein Csp_A06930 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 468 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 62/239 (25%), Positives = 105/239 (43%), Gaps = 30/239 (12%) Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR---- 123 ++ A+ +VI +PP A+ + V ++ GI + A L K + R Sbjct: 97 QSRADLAVIALPPEDLTAALEIAGRIACKAAVIVSSGISA----ELAASLAKIAKREGVQ 152 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPN G+ P + G + +G + ++S+SG L + + +G ST V + Sbjct: 153 LLGPNSLGLQRPQLQLNASLAGPLAHRGPLALVSQSGALASSMLDWAANNAVGFSTVVSL 212 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G P + VL+ D T+SIV+ E +A +F+ KP+V Sbjct: 213 G--PHTSVDLAHVLDFLANDAQTQSIVVYME----GISDARRFMSALRMAANAKPVVVLK 266 Query: 244 AGKTAPPGRTMG--HAGAVISGGKGGAEDKIN-AMKEAGICIAPSPARIGRSLVELLGS 299 AG+ P G H+GA++ G++D + A++ AG R+ RS VEL + Sbjct: 267 AGRR-PAGNEAAQTHSGAIV-----GSDDVFDAALRRAGAV------RV-RSFVELFSA 312 >gi|312092975|ref|XP_003147523.1| hypothetical protein LOAG_11959 [Loa loa] gi|307757313|gb|EFO16547.1| hypothetical protein LOAG_11959 [Loa loa] Length = 86 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 5/63 (7%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+VQG TGK TFH +Q I Y T VVGG+ P K T ++ PVF T Sbjct: 29 ALRINKDTKVIVQGFTGKQATFHGQQMINY-NTNVVGGVTPSKAGTM----HLERPVFGT 83 Query: 62 VAE 64 V E Sbjct: 84 VKE 86 >gi|92113219|ref|YP_573147.1| GCN5-related N-acetyltransferase [Chromohalobacter salexigens DSM 3043] gi|91796309|gb|ABE58448.1| GCN5-related N-acetyltransferase [Chromohalobacter salexigens DSM 3043] Length = 893 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 15/143 (10%) Query: 123 RLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R++GPNC GIL P ++ + P KG V +++SG + + S G+G S Sbjct: 129 RIVGPNCLGILAPHMGINASFAHLTPA----KGDVAFVTQSGAVATSILDWASARGIGFS 184 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V +G + +F D+L+ D T SI++ E A E +FL R KP Sbjct: 185 HVVSLGA--MSDVDFGDMLDYLALDPKTRSILLYVE----AVTEVRKFLSAARMASRNKP 238 Query: 239 IVGFVAGK-TAPPGRTMGHAGAV 260 +V G+ TA + H GA+ Sbjct: 239 VVVVKTGRSTAGAKAALSHTGAL 261 >gi|296156217|ref|ZP_06839056.1| GCN5-related N-acetyltransferase [Burkholderia sp. Ch1-1] gi|295893723|gb|EFG73502.1| GCN5-related N-acetyltransferase [Burkholderia sp. Ch1-1] Length = 892 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 13/164 (7%) Query: 118 EKSSSRLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K +L+GPNC G P + +G++ G + ++G + ++S+SG LT + + +G Sbjct: 114 RKHGIQLLGPNCLGYQRPRLNINVGVV-GPLAQQGPLALVSQSGALTSSILDWADKNAVG 172 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST V +G P + L+ D AT SIV+ E A +FL Sbjct: 173 FSTVVSLG--PNTAVDLAQTLDFLATDPATHSIVIYME----GITNARRFLSALRAAAIT 226 Query: 237 KPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAG 279 KP+V AG+ A + + H+G +I G E A++ AG Sbjct: 227 KPVVVLKAGRKAAASQAALTHSGNII----GSDEVFDAALRRAG 266 >gi|307824195|ref|ZP_07654421.1| CoA-binding domain protein [Methylobacter tundripaludum SV96] gi|307734575|gb|EFO05426.1| CoA-binding domain protein [Methylobacter tundripaludum SV96] Length = 893 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 7/147 (4%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + S R+IGPNC G+ P + G++ +LS+SG + + + +G Sbjct: 123 HRYSIRIIGPNCLGVARPSGHLNATFGDGTIKDGNLALLSQSGAVCTAILDWAKSQDIGF 182 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 ST V +GG +F +VL+ D T I+M E +A +FL R K Sbjct: 183 STVVSMGG--AADIDFGEVLDYLATDSKTTGILMYVE----GIRDARRFLSGLKAAARLK 236 Query: 238 PIVGFVAGKT-APPGRTMGHAGAVISG 263 P++ +G+ A M H GA++ G Sbjct: 237 PVILIKSGRHEAGCKAAMSHTGAMVGG 263 >gi|307151127|ref|YP_003886511.1| CoA-binding domain-containing protein [Cyanothece sp. PCC 7822] gi|306981355|gb|ADN13236.1| CoA-binding domain protein [Cyanothece sp. PCC 7822] Length = 912 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 8/159 (5%) Query: 108 LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 L++ R + + R+IGPNC G++ P + I R G+VG +S+SG + + Sbjct: 129 LELERQIQEIARGKIRIIGPNCLGVMNPRNGLNATFASGIARPGNVGFISQSGAICTAVL 188 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + E +G S V IG + + D++ D T IV+ E G +A FL Sbjct: 189 DWSISENVGFSAFVSIGS--MLDVNWGDLIYYLGDDPHTHCIVIYMESIG----DARSFL 242 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGK 265 + KPI+ AG+T + H GA +SG K Sbjct: 243 SAAREVALTKPIIIIKAGQTEAAAKAATSHTGA-LSGSK 280 >gi|149174218|ref|ZP_01852845.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein [Planctomyces maris DSM 8797] gi|148846763|gb|EDL61099.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein [Planctomyces maris DSM 8797] Length = 899 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 7/142 (4%) Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S R+IGPNC GI+ P + G++ +S+SG L + QE +G S Sbjct: 126 SGMRIIGPNCLGIMAPYVNLNASFATDMPLTGNIAFISQSGALCTAVLDWALQEKVGFSH 185 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V +G + D+++ F D T+SI++ E + EA QF+ + KPI Sbjct: 186 FVSVGN--MLDVGIADLIDYFALDPQTKSIILYVE----SITEARQFMSAARAFTKHKPI 239 Query: 240 VGFVAGKTAPPGRTM-GHAGAV 260 + + AG+ + H GA+ Sbjct: 240 IAYKAGRFQESAKAASSHTGAM 261 >gi|22298800|ref|NP_682047.1| hypothetical protein tlr1257 [Thermosynechococcus elongatus BP-1] gi|22294981|dbj|BAC08809.1| tlr1257 [Thermosynechococcus elongatus BP-1] Length = 905 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 6/130 (4%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 ++ R+IGPNC G++ P + ++ R G VG LS+SG L + + QE +G Sbjct: 134 RQARLRIIGPNCLGVMCPPTGLNATFAATMARSGHVGFLSQSGALCTSILDWSLQENVGF 193 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V IG + + D++ D T IV+ E G+A FL + K Sbjct: 194 SAFVSIGT--MLDVGWGDLIYYLGDDPQTRCIVIYMESLGNARS----FLSAAREVAYIK 247 Query: 238 PIVGFVAGKT 247 PI+ AG+T Sbjct: 248 PIIVIKAGRT 257 >gi|167840791|ref|ZP_02467475.1| acetyltransferase, GNAT family protein [Burkholderia thailandensis MSMB43] Length = 787 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RL+GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 125 RLVGPGSLGVVSPALNAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D AT +I++ + SA +F+ R KP++ Sbjct: 185 LGGE--ADVDAADVLDYLASDAATRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 238 Query: 243 VAGK 246 AG+ Sbjct: 239 RAGR 242 >gi|149036443|gb|EDL91061.1| succinate-CoA ligase, GDP-forming, alpha subunit, isoform CRA_d [Rattus norvegicus] Length = 72 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 34/61 (55%), Positives = 51/61 (83%) Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 + KP+V F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G + Sbjct: 4 KAKPVVSFIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVIVSMSPAQLGTCMY 63 Query: 295 E 295 + Sbjct: 64 K 64 >gi|218778995|ref|YP_002430313.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760379|gb|ACL02845.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 486 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 87/179 (48%), Gaps = 25/179 (13%) Query: 111 VRVKARLEKSSS---RLIGPNCPGILTPDSCKIGIMPGSIFRK--GSVGILSRSGTLTYE 165 + ++ +LE+ ++ R++GPNC GI P + ++PG F K GS ++S+SG L + Sbjct: 116 IALQKQLEEYAAKGLRIVGPNCFGIHCPKG-GLTVLPGFDFNKQPGSCSMISQSGGLAND 174 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEF--IDVLELFLADEATESIVMVGEIGGSAEEEA 223 + + GLG S V G G + I ++E D TE I I G A +A Sbjct: 175 FGHEAALAGLGISKVVSFG----NGCDLDAIALMEYLADDPQTEYI--AAYIEGVA--DA 226 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKI--NAMKEAG 279 FL K KKP++ + G T GR T+ H G++ G E KI A+ +AG Sbjct: 227 GAFLDVVRKTAAKKPVIIWKGGLTPLGGRATLSHTGSM------GGESKIWEGALAQAG 279 >gi|295097254|emb|CBK86344.1| Succinyl-CoA synthetase, alpha subunit [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 513 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 13/202 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK R +N +VI V + A +++E ++ +++ ++ + + D + +K Sbjct: 99 YATIASAKTHRPDSNLAVISVNGTFAAREARQALENDLNVML-FSDNVSLDDELALKQLA 157 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + G+ + R+G +GI+ SGT + E + + G G Sbjct: 158 HEKGLLMMGPDCGTAIINGA---GLCFANAVRRGQIGIVGASGTGSQELSVRIHEFGGGV 214 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D +++ AD+AT I ++ + A E R Sbjct: 215 SQLIGTGGRDLSEKIGGLMMLDAIDMLEADDATRVIALISKPPAPAVAEKVL----ARAR 270 Query: 234 GRKKPIVGFVAGKTAPPGRTMG 255 +KP+V G+ PP G Sbjct: 271 ACRKPVVVCFLGRNEPPADEDG 292 >gi|82594846|ref|XP_725597.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23480664|gb|EAA17162.1| CoA binding domain, putative [Plasmodium yoelii yoelii] Length = 949 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 11/167 (6%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +K++ R+IGPNC GI+ + KG +LS+SG + A+ + Q +G Sbjct: 154 QKNNIRIIGPNCLGIIHSYHNMNASFADNEVLKGHFSLLSQSGAICSAALDLSLQHNIGF 213 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S + +G + +F +++E D+ T+ I++ E G + +F++ + K Sbjct: 214 SHFISVGS--MCDVQFYELIEYLFYDDNTKYILLYVESIGDMD----KFMETCKRICLYK 267 Query: 238 PIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 PI+ +GKTA + H G+++ G E +MK+ G+ +A Sbjct: 268 PIIILKSGKTAKAAEAAISHTGSMV----GNYEIFYASMKKLGVLVA 310 >gi|148258919|ref|YP_001243504.1| putative Acetyl-CoA synthetase [Bradyrhizobium sp. BTAi1] gi|146411092|gb|ABQ39598.1| putative Acetyl-CoA synthetase [Bradyrhizobium sp. BTAi1] Length = 903 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RL+GPNC G+L P + + G + ++S+SG + V SQ +G S + Sbjct: 125 RLVGPNCLGVLAPGARLNASFASRMPLAGDLAVVSQSGAIAAGMVEWASQRTVGFSAIIS 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IG +F D+L+ F D AT ++++ E + ++A +F+ R KP+V Sbjct: 185 IGDQ--LDVDFGDLLDFFAFDRATRAVLLYVE----SVKDARKFMSAARAAARTKPVVVV 238 Query: 243 VAGK 246 +G+ Sbjct: 239 KSGR 242 >gi|330466462|ref|YP_004404205.1| CoA-binding domain-containing protein [Verrucosispora maris AB-18-032] gi|328809433|gb|AEB43605.1| CoA-binding domain-containing protein [Verrucosispora maris AB-18-032] Length = 851 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 21/206 (10%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP-------VL 108 +P + + A+A + +V+ VPP A + + ++ +A + +V I+ G Sbjct: 242 LPAYPSAADAG--LPVDLAVVAVPPESAPEVVADAAKAGVHGLVVISAGFAESGVEGAAA 299 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILTPD-SCKI-GIMPGSIFRKGSVGILSRSGTLTYEA 166 V+A + R+IGPNC G+ D + ++ + + G VGI S+SG Sbjct: 300 QRALVRA-AHAAGMRVIGPNCLGVANTDPTVRLNATLAPRLPVPGRVGIFSQSGAFGVAL 358 Query: 167 VFQTSQEGLGQSTAVGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + + + GLG S+ V G V G D+L+ + D AT+ I++ E G+ + Sbjct: 359 LAEADRRGLGLSSFVSAGNRADVSGN---DLLQYWQDDPATDVIMLYLETFGNPR----K 411 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG 251 F + + GR KP+V A PPG Sbjct: 412 FARLARRIGRDKPVVAL-ASPARPPG 436 >gi|291614007|ref|YP_003524164.1| CoA-binding domain protein [Sideroxydans lithotrophicus ES-1] gi|291584119|gb|ADE11777.1| CoA-binding domain protein [Sideroxydans lithotrophicus ES-1] Length = 896 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 14/159 (8%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 ++ + RLIGPNC GI+ P + G++ ++S+SG L + ++ +G Sbjct: 123 QRYNIRLIGPNCLGIMRPSIGLNATFNKGVANNGNIALISQSGALCTAILDWANRNDVGF 182 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S+ V +G +F ++L+ ++D T SI+M E A F+ R K Sbjct: 183 SSVVSMGSS--TDVDFGEILDYLVSDPNTRSILMYIE----GVRNARSFMSALRAAARIK 236 Query: 238 PIVGFVAGKTAPPGR--TMGHAGAVISGGKGGAEDKINA 274 P++ G+ P G M H +++ GA+D +A Sbjct: 237 PVILVKVGRH-PAGSKAAMSHTASLV-----GADDVFDA 269 >gi|331220505|ref|XP_003322928.1| ATP-citrate synthase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301918|gb|EFP78509.1| ATP-citrate synthase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1086 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 113/289 (39%), Gaps = 67/289 (23%) Query: 6 DKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVNVPVF 59 D+ T+ LV GL +A G + A + V I+P G YW +PV+ Sbjct: 530 DETTRGLVYGLQPRAIQGMLDFDFACGRKKPSVAAMIYPFGGHHVQKFYWGTKETLLPVY 589 Query: 60 TTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARL 117 T+AEA K+ A+ V + + ++++E +I I I EG+P + Sbjct: 590 ATIAEAVKKHPEADTLVNFSSSRSVYQSTLDALEIPQIKSIALIAEGVPERHAREILHLA 649 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 E +IGP + +R R G+L Sbjct: 650 ETKKVIIIGP------------------ATYRH-------RWGSLP-------------- 670 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-K 236 GT FID + + AD + +V++GE+GG E + +K G+ K Sbjct: 671 ------------GTTFIDHMLRYEADPNCKMLVLLGEVGGVEEYRVIEAVKS----GQIK 714 Query: 237 KPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICI 282 KPIV + G A T GHAG++ + A+ K AM+ AG + Sbjct: 715 KPIVAWAIGTCAKMFTTEVQFGHAGSMANSDLETADAKNKAMRAAGFIV 763 >gi|91200872|emb|CAJ73927.1| strongly similar to acetyl-CoA synthetase (ADP-forming) gene [Candidatus Kuenenia stuttgartiensis] Length = 706 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 18/228 (7%) Query: 61 TVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP---VLDMVRVK-- 114 T A K+ R + ++I VP + E E +I IV I+ G + +R K Sbjct: 57 TYANLKDIRDTIDMAIIVVPARYVVKIVDECAEKKIDSIVVISAGFKESGIEGAIREKEL 116 Query: 115 -ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 ++ + + RL+GPNC G++ SC + +G++ S+SG L + E Sbjct: 117 CQKITRHAIRLLGPNCLGLIDTQSCLNASFAADMPERGNIAFFSQSGALCTAILDWAVVE 176 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G S V +G +D++ DE T+ V++G + G + F+ K Sbjct: 177 CVGFSKFVSMGNKA--DINEVDLINAMYEDENTK--VILGYLEGV--KNGKDFIATTGKI 230 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGI 280 +KKP++ +G TA + A + +G G+E + A K++G+ Sbjct: 231 TKKKPLIVVKSGGTAAGSK----AASSHTGTLAGSERAFDAAFKQSGV 274 >gi|11498810|ref|NP_070039.1| hypothetical protein AF1211 [Archaeoglobus fulgidus DSM 4304] gi|2649370|gb|AAB90033.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 685 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 E+ +L+GPNC G++ + KG + LS+SG + + + G+G Sbjct: 116 ERYGVKLVGPNCLGMINTEIAMNATFSRVAPEKGRIAFLSQSGAFILAVLEWSKRNGVGF 175 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V +G + D LE D++T+ I++ E E+ +F++ R+K Sbjct: 176 SKVVSLGNKAMLDES--DFLEYLAKDDSTDVILIYME----GVEDGRKFMRVAKSVARRK 229 Query: 238 PIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 P+V AGK+ + H G++ G E A +++G+ A S Sbjct: 230 PVVVMKAGKSQSGAKAASSHTGSL----AGSYEAYRAAFRQSGVIEASS 274 >gi|220910350|ref|YP_002485661.1| CoA-binding domain-containing protein [Cyanothece sp. PCC 7425] gi|219866961|gb|ACL47300.1| CoA-binding domain protein [Cyanothece sp. PCC 7425] Length = 920 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 11/170 (6%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 ++ A++ S R+IGPNC G++ P + + G VG +S+SG L + + Sbjct: 134 QILAQIAGSQIRIIGPNCLGVMNPHTGLNATFGSGMALPGKVGFVSQSGALCTSVLDWSL 193 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +E +G S V +G + ++ D++ D T SI++ E G+ FL Sbjct: 194 KEKVGFSAFVSLGA--MVDVDWGDLIYYLGDDPHTHSILIYMESIGNPRS----FLSAAR 247 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGI 280 + R KPI+ AG+T R A A +G G++ ++ A K G+ Sbjct: 248 EVARTKPIIVIKAGQTEVAAR----AAASHTGSLAGSDAVLDAAFKRCGV 293 >gi|327401888|ref|YP_004342727.1| CoA-binding domain-containing protein [Archaeoglobus veneficus SNP6] gi|327317396|gb|AEA48012.1| CoA-binding domain protein [Archaeoglobus veneficus SNP6] Length = 659 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 15/179 (8%) Query: 112 RVKARL----EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 +++ARL K +L+GPNC GI+ + S + G++ LS+SG + Sbjct: 103 KLEARLVEICRKYGIKLVGPNCLGIINCHNGLNATFSSSTPKPGNIAFLSQSGAFVLAVI 162 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + GLG S V +G V D +E+ D T+ I++ E E +F+ Sbjct: 163 EYFNAVGLGFSKIVSLGNKAVLDES--DFMEMLADDRHTDVIMLYLE----GIENGRKFM 216 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + K + KP++ +GKT R H G++ G E A +++G+ A S Sbjct: 217 EVARKLSKVKPVIALKSGKTDAGARAASSHTGSI----AGSYEACAAAFRQSGVINASS 271 >gi|154252417|ref|YP_001413241.1| CoA-binding domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154156367|gb|ABS63584.1| CoA-binding domain protein [Parvibaculum lavamentivorans DS-1] Length = 893 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 7/139 (5%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R+ GPNC GI+TP + KG+V +S+SG + + + G+G S Sbjct: 128 RIAGPNCLGIMTPGNGLNASFGHVQPEKGNVAFVSQSGAVVTAVLDWATSRGIGFSHVAS 187 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG + +F D+L+ AD T+SI++ E + +A +F+ + R KP++ Sbjct: 188 LGG--MSDVDFGDMLDFLAADPHTKSILLYIE----SVRDARKFMSAGRQASRLKPVIVI 241 Query: 243 VAGKTAPPGRTMG-HAGAV 260 +G+ R H GA+ Sbjct: 242 KSGRHEAGARAAASHTGAL 260 >gi|319793646|ref|YP_004155286.1| gcn5-related N-acetyltransferase [Variovorax paradoxus EPS] gi|315596109|gb|ADU37175.1| GCN5-related N-acetyltransferase [Variovorax paradoxus EPS] Length = 899 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 22/204 (10%) Query: 99 VCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSR 158 V I+ GI + + + L+GPN G P + G + + G + ++S+ Sbjct: 95 VVISNGIASEQAAQWRKIARREGVHLLGPNSLGFQRPLLHLNASVAGPLAKAGPLALVSQ 154 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGS 218 SG LT + Q G+G S+ V +G P + VL+ D+AT SI++ E G S Sbjct: 155 SGALTASMLDWARQNGVGFSSVVSLG--PHTSVDIPQVLDFLANDQATHSIIVYLE-GIS 211 Query: 219 AEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG--HAGAVISGGKGGAEDKIN-AM 275 +A +F+ KP+V AG+ P G H+ +++ G++D + A+ Sbjct: 212 ---DARRFMSALRSASHAKPVVVLKAGRK-PAGNAAAQTHSASIV-----GSDDVFDAAL 262 Query: 276 KEAGICIAPSPARIGRSLVELLGS 299 + AG R+ RS VEL + Sbjct: 263 RRAGAV------RV-RSFVELFSA 279 >gi|47204726|emb|CAF96044.1| unnamed protein product [Tetraodon nigroviridis] Length = 535 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 76/189 (40%), Gaps = 23/189 (12%) Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 I P C I I+ ++R GSV +SRSG ++ E S+ G V IG Sbjct: 4 IKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVFEGVAIG 63 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF------------------ 226 GD G+ F D + + E IV++GE+ + F Sbjct: 64 GDRYPGSVFTDHVLRYQDTPGVEMIVVLGEVSNRQHADPCCFSLPDTHSVWVQIGGTEEY 123 Query: 227 -LKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGIC 281 + + +RGR KP+V + G A + GHAGA + A K A+KEAG Sbjct: 124 KICEAIQRGRITKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNKALKEAGAF 183 Query: 282 IAPSPARIG 290 + S +G Sbjct: 184 VPKSFDELG 192 >gi|329765910|ref|ZP_08257475.1| CoA-binding domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137616|gb|EGG41887.1| CoA-binding domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 698 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 19/159 (11%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK-----GSVGILSRSGTLTYEA 166 ++K +K ++IGPNC G++ D M S F K G + ++S+SG + Sbjct: 113 KIKDIAKKYKIQIIGPNCLGVMNLDP---KTMMNSTFLKVTPKSGKIALVSQSGAICAAL 169 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 V S +G+G S + +G +D+L++ T+ IVM E G +E F Sbjct: 170 VEDASAQGIGFSAVISMGNKAAMSE--VDILKILANHNQTKVIVMYLEDMGDGQE----F 223 Query: 227 LK--DEAKRGRKKPIVGFVAGKTAPPG--RTMGHAGAVI 261 LK + KKP++ +G++ P G M H GA++ Sbjct: 224 LKVCKNITKKLKKPVLVLKSGRS-PEGAKAAMSHTGALM 261 >gi|219852563|ref|YP_002466995.1| CoA-binding domain protein [Methanosphaerula palustris E1-9c] gi|219546822|gb|ACL17272.1| CoA-binding domain protein [Methanosphaerula palustris E1-9c] Length = 680 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 60/265 (22%), Positives = 110/265 (41%), Gaps = 32/265 (12%) Query: 28 AILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAI 87 A+++ G ++P G P T + + +VI VP + I Sbjct: 257 AVMHNLLHFPGQLYPVNNKRSEIQGLKAYPTITAIP-----NPVDMAVITVPANHVPQVI 311 Query: 88 IESIEAEIPLIVCITEGIPVL-DM-----VRVKARLEKSSSRLIGPNCPGILTP----DS 137 E + +P+ V IT G + DM RV + R+IGPNC G++ P D+ Sbjct: 312 EECGQKGVPMAVIITAGFKEMGDMGKALEDRVVEIARRYGIRIIGPNCLGLIVPPRGLDT 371 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 + P G+V +S+SG + V + +G S + +G F+D L Sbjct: 372 TYVHESPNP----GTVAFISQSGAIINTVVDWSLSHDIGFSAVISVGNQ--ADLNFLDYL 425 Query: 198 ELFLADEATESIVM-VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-G 255 + D T+++++ + EI + F+K ++ + KP+V +G + + Sbjct: 426 KFVQHDPKTKAVILYIEEI-----TDGKAFMKVVSEVTKYKPVVAIKSGSSQRGQKAASS 480 Query: 256 HAGAVISGGKGGAEDKINAMKEAGI 280 H G++ G E + A ++AG+ Sbjct: 481 HTGSL----SGSYEVYMEAFRQAGV 501 >gi|82617306|emb|CAI64211.1| probable acetyl-CoA synthetase [uncultured archaeon] Length = 895 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 15/143 (10%) Query: 123 RLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R+IGPNC GI+ P ++ +MP GSV +S+SG L + + +G S Sbjct: 128 RIIGPNCLGIIMPRFSLNASFAHLMP----EHGSVAFISQSGALCTAVLDMCAHRHIGFS 183 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V IG + +F D+++ F D AT SI++ E + ++ +F+ + KP Sbjct: 184 AFVSIGS--MLDVDFGDLIDYFGMDPATGSIMLYIE----SLKDVREFMSAARHFAKNKP 237 Query: 239 IVGFVAGKTAPPGRTMG-HAGAV 260 I+ +G+ A + H GA+ Sbjct: 238 IIVVKSGRFARSAKAAASHTGAL 260 >gi|260905178|ref|ZP_05913500.1| acid--CoA ligase [Brevibacterium linens BL2] Length = 704 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 18/210 (8%) Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 P ++++AE E VI +P +G + +++ A + + I+ +P V R Sbjct: 53 PTYSSLAELPE--TPELLVISIPGNGVPAVVDDALAAGVRAFLIISARVP--GAAEVAQR 108 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + +RLIGP+ G++ D+ ++ F GS+ ++++SG L E +++ GLG Sbjct: 109 IISAGARLIGPSSLGVV--DASNDLLLAWGNFTPGSLAVVTQSGQLGTEIATLSARSGLG 166 Query: 177 QSTAVGIGGDP-VKGTEFIDVLELFLADEATESIVMVGE--IGGSAEEEAAQFLKDEAKR 233 S IGG V+ E +L + D AT +V+ E GGSA A Q L R Sbjct: 167 ISRFASIGGQSDVRAAE---ILSSLVDDAATTQVVLYLESFTGGSALVSAMQAL-----R 218 Query: 234 GRKKPIVGFVAGKTAPPGR-TMGHAGAVIS 262 KP + G++ R H G++ S Sbjct: 219 AAGKPTMILTTGQSDAGARLARSHTGSLTS 248 >gi|302342119|ref|YP_003806648.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075] gi|301638732|gb|ADK84054.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075] Length = 738 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 11/164 (6%) Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPN G+ P G+ G+ +++SG + + +F +G+G G Sbjct: 366 ILGPNTMGLCNPHHKFYCSGAGARPAPGATAFVAQSGNMGVQLLFFAEDQGIGIRAFAGS 425 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G + + E D L+ F AD+ T+++++ E + ++ +F + ++ R+KP+V Sbjct: 426 GNEAMLTVE--DALDGFEADKLTKTVLLYLE----SVKDGRRFFQSASRLSRRKPVVALK 479 Query: 244 AGKTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 G+TA G+ H GA+ S + A ++AG+ +A P Sbjct: 480 GGRTAIGGKAAASHTGALASNNRVFEA----ACRQAGVVLADQP 519 >gi|323097745|emb|CBJ18434.1| ATP citrate lyase [uncultured bacterium] Length = 339 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 8/124 (6%) Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPI 239 + IGGD G+ FID L + + ++++GE+GG+ E + + +K+ G+ KPI Sbjct: 2 IAIGGDRFVGSVFIDNLLRLEKNPDVKYMILLGEVGGTEEYKVIEAIKE----GKLTKPI 57 Query: 240 VGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + G K G GHAGA + + AE K AM EAGI + S + + + E+ Sbjct: 58 IAWCIGTIAKHYDSGVQFGHAGASANDDRETAEAKNRAMAEAGIHVPESFNELPQVINEV 117 Query: 297 LGSL 300 L Sbjct: 118 YTKL 121 >gi|82702800|ref|YP_412366.1| GCN5-related N-acetyltransferase [Nitrosospira multiformis ATCC 25196] gi|82410865|gb|ABB74974.1| GCN5-related N-acetyltransferase [Nitrosospira multiformis ATCC 25196] Length = 889 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 22/158 (13%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRK-----GSVGILSRSGTLTYEAVFQTSQEGLGQ 177 RL+GPNC GI+ P IG+ + F K G++ +S+SG L + +G Sbjct: 125 RLVGPNCLGIMRP---SIGL--NATFYKGGANSGNIAFVSQSGALCTAILDWAQNNDVGF 179 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S+ V +G +F ++L+ +AD AT+SI+M E +A +F+ R K Sbjct: 180 SSIVSMGSS--TDVDFGEILDYLVADTATQSILMYIE----GIRDARRFMSALRAATRLK 233 Query: 238 PIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINA 274 P++ G+ A + H A++ GA++ NA Sbjct: 234 PVIVVKVGRHAAGAKAARSHTAALV-----GADNVFNA 266 >gi|241764821|ref|ZP_04762827.1| GCN5-related N-acetyltransferase [Acidovorax delafieldii 2AN] gi|241365653|gb|EER60373.1| GCN5-related N-acetyltransferase [Acidovorax delafieldii 2AN] Length = 896 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 67/271 (24%), Positives = 114/271 (42%), Gaps = 25/271 (9%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFT--TVAEAKERTAANASVIYVPPSGAGDAIIESI 91 T +HP + + G V T T+A+ +R + + ++I +PP+ A+ + Sbjct: 29 TSYAQALHPALRAQRFAGTLQFVDTHTSGTLADLAQRRS-DLAIIALPPAEVPAALEVAG 87 Query: 92 EAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 + ++ G+ +K + L+GPN G P G + R G Sbjct: 88 RIGCRAALVMSSGMDADQAANLKKIARREGVYLLGPNSLGFQRPHLQLNASAAGPLARDG 147 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 S+ ++ +SG LT + S +G S V +G P + VL+ D T+SIV+ Sbjct: 148 SLALVCQSGALTASILDWASNNAVGFSAVVSLG--PNTDVDIAQVLDFLAHDARTQSIVV 205 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG--HAGAVISGGKGGAE 269 E G S A +F+ KP+V AG+ P G H+G ++ G++ Sbjct: 206 YME-GIS---NARRFMSALRSAANAKPVVVLKAGRK-PAGNEAAQTHSGTIV-----GSD 255 Query: 270 DKIN-AMKEAGICIAPSPARIGRSLVELLGS 299 D + A++ AG R+ RS VEL + Sbjct: 256 DVFDAALRRAGAV------RV-RSFVELFSA 279 >gi|328954397|ref|YP_004371731.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109] gi|328454721|gb|AEB10550.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109] Length = 890 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 19/232 (8%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIP--LIVCITEGIPVLDMVRV 113 +PVF ++A + +++ VP G D + E +A++ +I+ + ++ Sbjct: 57 IPVFPSIAAVP--ADIDLAIVAVPIKGVADVMRECGQAKVSGAIIISAGGKEVGEEGEKI 114 Query: 114 KARLEKSSS----RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 +A + ++ R +GPNC GIL P S R GSV +LS+SG + + Sbjct: 115 EADIHAAAQAYGIRYLGPNCMGILCPRSRLNASFAAHSVRPGSVALLSQSGAICSVILDL 174 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + +G S V IG + +F ++++ D+ SI++ E +F+ Sbjct: 175 AESQNIGFSHFVSIGS--MADLDFAEMIDYLGNDDQVRSILIYME----NLVHHRKFMSA 228 Query: 230 EAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGI 280 R KPI+ +G++ R H GA+ G A + A + AGI Sbjct: 229 ARSVSRVKPIIVVKSGRSEAAARAATSHTGAL--AGNDAAYNA--AFQRAGI 276 >gi|220936220|ref|YP_002515119.1| acetyltransferase [Thioalkalivibrio sp. HL-EbGR7] gi|219997530|gb|ACL74132.1| acetyltransferase [Thioalkalivibrio sp. HL-EbGR7] Length = 897 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 12/156 (7%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPNC G++ P + G + ++S+SG + + + +G S Sbjct: 128 RLIGPNCLGVIRPKHKINATFSRNTALPGHLALVSQSGAICTAILDWAEDQRIGFSLVAS 187 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G +F DVL+ D T SI++ E A +F+ R KP++ Sbjct: 188 LGD--AADVDFGDVLDFLALDAETHSILLYVE----GIRHARRFMSGLRAAARMKPVIVI 241 Query: 243 VAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKE 277 AG+ R M H GA++ GA+D +A E Sbjct: 242 KAGRHEEGSRAAMSHTGALV-----GADDVFDAALE 272 >gi|225412262|ref|ZP_03761451.1| hypothetical protein CLOSTASPAR_05484 [Clostridium asparagiforme DSM 15981] gi|225042227|gb|EEG52473.1| hypothetical protein CLOSTASPAR_05484 [Clostridium asparagiforme DSM 15981] Length = 695 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 14/145 (9%) Query: 124 LIGPNCPGIL--TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 L+GPNC G + T D + S RKG+VG++S+SG + + G+ S + Sbjct: 126 LMGPNCAGFVNYTDDVYPFAFLSESRDRKGTVGVVSQSGQICLSLM---DSPGMKFSYVI 182 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG--RKKPI 239 G V E D LE + DE+T+ + M E + QFL D KR ++KP+ Sbjct: 183 SSGNSAVVRME--DYLEFLVEDESTKVVAMYLE----GVQNVPQFL-DCLKRAAMKRKPV 235 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGG 264 V AG++ GR +SG Sbjct: 236 VILKAGRSEKGGRLAASHTGSLSGA 260 >gi|254432536|ref|ZP_05046239.1| acetyltransferase, gnat family [Cyanobium sp. PCC 7001] gi|197626989|gb|EDY39548.1| acetyltransferase, gnat family [Cyanobium sp. PCC 7001] Length = 938 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 11/170 (6%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 R++ L S RL+GPNC G++ P + G VG LS+SG + + + Sbjct: 134 RLRQILRGSGMRLLGPNCLGLMNPRLGLNATFASGMAAPGHVGFLSQSGAICTAVLDWSH 193 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 ++G+G S V +G + + D++ D AT SIV+ E G +A FL Sbjct: 194 RQGVGFSAFVSMGS--MLDVGWGDLITYLGDDPATRSIVVYMEAVG----DARAFLSAAR 247 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGI 280 + KPIV G+T R A A +G G++ + A++ G+ Sbjct: 248 EVALTKPIVLIKGGRTDEAAR----AAASHTGSLAGSDAVLEAALRRCGV 293 >gi|288930684|ref|YP_003434744.1| CoA-binding protein [Ferroglobus placidus DSM 10642] gi|288892932|gb|ADC64469.1| CoA-binding domain protein [Ferroglobus placidus DSM 10642] Length = 459 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 58/254 (22%), Positives = 115/254 (45%), Gaps = 26/254 (10%) Query: 44 KGSTYWTGGNVN----VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 KG Y N + V + +V + E + +++ VP +++ E +E V Sbjct: 40 KGKIYAVNPNYDEILGVKAYRSVKDLPE--TPDLAILAVPRDAIYNSVRELLEKGCRAFV 97 Query: 100 CITEGIPVLDMV-------RVKARLEKSSSRLIGPNCPGILTPDS-CKIGIMPG-SIFRK 150 I+ G ++ ++K ++ ++ +IGPN G++ + P S+ +K Sbjct: 98 IISAGFREAEIADGEELHKKLKELVDSYNAVVIGPNTFGMVNLKADLNASFTPALSLLKK 157 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G + ++S+SG + + + +EG+G S VG+G +F D+LE D+ T+SI Sbjct: 158 GDIALISQSGGVCHLIAPYSMREGIGFSKIVGLGNR--LNVDFHDMLEYLKDDKETKSIA 215 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAE 269 + E +E + + + R KP+V AG+ + + H G++ G + Sbjct: 216 LYIE----GIDEPKKLCEKIREVSRVKPVVAMKAGRFEKADKASKSHTGSM----AGNYK 267 Query: 270 DKINAMKEAGICIA 283 ++A+K+ G IA Sbjct: 268 LYVSALKQHGAVIA 281 >gi|297538841|ref|YP_003674610.1| CoA-binding domain-containing protein [Methylotenera sp. 301] gi|297258188|gb|ADI30033.1| CoA-binding domain protein [Methylotenera sp. 301] Length = 892 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 26/174 (14%) Query: 117 LEKSSS---RLIGPNCPGILTPDSCKIGIMPGSIFRK-----GSVGILSRSGTLTYEAVF 168 LEK+ RLIGPNC G++ PD IG+ + F K G++ +S+SG L + Sbjct: 119 LEKAHHYGIRLIGPNCLGVMCPD---IGL--NATFNKGNAIAGNIAFISQSGALCTAILD 173 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + +G S V +G +F ++L+ ++D T SI++ E +A F+ Sbjct: 174 WANANDVGFSNVVSMGAS--VDVDFGEILDYLISDTKTRSILLYIE----GIHDARGFMS 227 Query: 229 DEAKRGRKKPIVGFVAGKT-APPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGI 280 R KP++ G+ A + H A++ G++D + A++ AG+ Sbjct: 228 SIRAAARIKPVILVKVGRHPAASKAAISHTSAIV-----GSDDAFDAAVRRAGV 276 >gi|91778593|ref|YP_553801.1| putative acetyl-CoA synthetase [Burkholderia xenovorans LB400] gi|91691253|gb|ABE34451.1| Putative acetyl-CoA synthetase [Burkholderia xenovorans LB400] Length = 892 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 13/183 (7%) Query: 99 VCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILS 157 + I+ G+ + A K +L+GPNC G P + + ++ G + ++G + ++S Sbjct: 95 LIISTGVDQAHAKELHAIARKHGIQLLGPNCLGYQRPRLNINVSVV-GPLAQQGPLALVS 153 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG LT + + +G ST V +G P + L+ D AT SIV+ E Sbjct: 154 QSGALTASILDWADKNAVGFSTVVSLG--PNTAVDLAQTLDFLATDPATHSIVIYME--- 208 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAG-KTAPPGRTMGHAGAVISGGKGGAEDKINAMK 276 A +FL KP+V AG K+A + H+G +I G E A++ Sbjct: 209 -GITNARRFLSALRAAAITKPVVVLKAGRKSAASQAALTHSGNII----GSDEVFDAALR 263 Query: 277 EAG 279 AG Sbjct: 264 RAG 266 >gi|37520644|ref|NP_924021.1| acetyl-CoA synthetase [Gloeobacter violaceus PCC 7421] gi|35211638|dbj|BAC89016.1| glr1075 [Gloeobacter violaceus PCC 7421] Length = 923 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 6/136 (4%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 +V A K R++GPNC G++ P G G++ G++ LS+SG L + + Sbjct: 129 QVLAEARKGGMRIVGPNCLGVMNPHLGFNGTFAGAMANPGNLAFLSQSGALCTSILDWSF 188 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +E +G S V +G + + D + D TESIV+ E G +A FL Sbjct: 189 REHVGFSAFVSMGS--MLDVGWGDWIYYLGDDPRTESIVIYMESIG----DARSFLSAAR 242 Query: 232 KRGRKKPIVGFVAGKT 247 + KPI+ AG+T Sbjct: 243 EVAYTKPIIVIKAGRT 258 >gi|303243793|ref|ZP_07330133.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanothermococcus okinawensis IH1] gi|302485729|gb|EFL48653.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanothermococcus okinawensis IH1] Length = 704 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 8/150 (5%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 +VK+ +K + R+IGPNC GI+ + F++G++ +S+SG + + Sbjct: 115 KVKSIAKKYNIRIIGPNCLGIINMHNRLNASFSKEYFKEGNITFISQSGAILTAILDIAP 174 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 LG S V +G + D++E + D+ TE V+V I G ++ +F++ Sbjct: 175 LLNLGFSKIVSLGNKI--DIQESDLMEYLIHDDTTE--VVVFYIEGLKDK---KFIESAK 227 Query: 232 KRGRKKPIVGFVAGKTAPPGRTM-GHAGAV 260 K + KPI+ +GKT + H G++ Sbjct: 228 KLAKIKPIIALKSGKTEAGAKAASSHTGSL 257 >gi|196231237|ref|ZP_03130096.1| CoA-binding domain protein [Chthoniobacter flavus Ellin428] gi|196224573|gb|EDY19084.1| CoA-binding domain protein [Chthoniobacter flavus Ellin428] Length = 902 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 6/130 (4%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 ++ R++GPNC G++ P S+ R G V LS+SG L + + +E +G Sbjct: 130 QRGHMRVLGPNCLGVMLPHIGLNATFAASMARAGKVAFLSQSGALCTAILDWSLREEVGF 189 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V +G + + D++E F D T+SIV E G +A FL + K Sbjct: 190 SAFVSLGS--MLDIGWGDLIEFFGDDPQTKSIVCYMESVG----DARTFLSAAREVAFSK 243 Query: 238 PIVGFVAGKT 247 PIV G+T Sbjct: 244 PIVVIKVGRT 253 >gi|323097749|emb|CBJ18436.1| ATP citrate lyase [uncultured bacterium] Length = 335 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 8/124 (6%) Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPI 239 + IGGD G+ FID L + + ++++GE+GG+ E + + +K G+ KPI Sbjct: 2 IAIGGDRFVGSVFIDNLLRMEKNPDVKYMILLGEVGGTEEYKVIEAVKS----GKITKPI 57 Query: 240 VGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + G K G GHAGA +G AE K AM EAGI + + + + E+ Sbjct: 58 IAWCIGTIAKYYDSGVQFGHAGASANGEMETAEYKNKAMAEAGIHVPKTFNDLPAKIKEV 117 Query: 297 LGSL 300 SL Sbjct: 118 FTSL 121 >gi|119510362|ref|ZP_01629497.1| GCN5-related N-acetyltransferase [Nodularia spumigena CCY9414] gi|119464999|gb|EAW45901.1| GCN5-related N-acetyltransferase [Nodularia spumigena CCY9414] Length = 743 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 24/216 (11%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 ++P++ ST + + + T+ + E A + +VI P I + ++A + + Sbjct: 73 VNPQRHST------LGIKAYPTIFDVPE--AVDLAVIATPAPTVPSIITQCVDAGVKSAI 124 Query: 100 CIT--------EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 ++ EGI + + +A + R+IGPNC G+++P + ++ R G Sbjct: 125 ILSAGFKETGAEGITLEQQILEQAH--RGKMRIIGPNCLGVMSPRTGLNATFASAMARPG 182 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 +VG +S+SG L + + E +G S V +G + + D++ D T+SIV+ Sbjct: 183 NVGFISQSGALCTAILDWSFSENVGFSAFVSLGS--MLDVGWGDLINYLGDDPHTKSIVI 240 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 E G + F+ + KPI+ AG+T Sbjct: 241 YMEAIG----DGRAFMSAARQVALTKPIIVIKAGRT 272 >gi|112490214|pdb|2CSU|A Chain A, Crystal Structure Of Ph0766 From Pyrococcus Horikoshii Ot3 gi|112490215|pdb|2CSU|B Chain B, Crystal Structure Of Ph0766 From Pyrococcus Horikoshii Ot3 Length = 457 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 22/221 (9%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---------PVLDMVRVKARLEKSSS 122 + ++I VP D +I+ E + +V IT G ++V + K Sbjct: 66 DLAIIVVPKRFVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIA---HKYGX 122 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R+IGPNC GI + ++ +KG+V +S+SG L V++T +E +G S + Sbjct: 123 RIIGPNCVGIXNT-HVDLNATFITVAKKGNVAFISQSGALGAGIVYKTIKEDIGFSKFIS 181 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G +F ++ E E ++I + E +F + + +KKPI+ Sbjct: 182 VGN--XADVDFAELXEYLADTEEDKAIALYIE----GVRNGKKFXEVAKRVTKKKPIIAL 235 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 AGK+ R ++G E A K++G+ +A Sbjct: 236 KAGKSESGARAASSHTGSLAGSWKIYE---AAFKQSGVLVA 273 >gi|302342544|ref|YP_003807073.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075] gi|301639157|gb|ADK84479.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075] Length = 497 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 9/145 (6%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQTSQEGLG 176 EK R +GPNC G++ K+ M S R G VG+ S+SG+ + GLG Sbjct: 127 EKWGIRFVGPNCLGVVNTHH-KLSTMFHSYNGRPGFVGMASQSGSFVTQMFDYLEPLGLG 185 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST +G + +D LE D T+ + M E A +F++ + +K Sbjct: 186 FSTCFSVGNS--ANVDLVDCLEHLGDDPNTKVVAMYVE----ALSRGRRFVEVCRRVSQK 239 Query: 237 KPIVGFVAGKTAPPGRT-MGHAGAV 260 KP+V + G T G+ + H G++ Sbjct: 240 KPVVAYYVGGTETGGKAGLSHTGSL 264 >gi|307352932|ref|YP_003893983.1| CoA-binding domain-containing protein [Methanoplanus petrolearius DSM 11571] gi|307156165|gb|ADN35545.1| CoA-binding domain protein [Methanoplanus petrolearius DSM 11571] Length = 702 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 21/174 (12%) Query: 118 EKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +K R++GPNC G+++P D+ + I P G++ +S+SG L + + Sbjct: 365 KKYGMRIVGPNCLGLISPYKGYDTTFLPITP----LPGNIAFISQSGALLNAVIDWSLSY 420 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 GLG S +G +F D L +DE T +I+M E G + +F++ ++ Sbjct: 421 GLGYSLVASVGNQ--CDLKFTDYLVWAQSDENTRAIIMYIEDVG----DGRRFMELVSEI 474 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK--GGAEDKINAMKEAGICIAPS 285 +KP+V AG + GH A G G E I A KE G A S Sbjct: 475 SPEKPVVVIKAGSS-----DKGHLAAASHTGSLAGSHEIYIEAFKECGAISASS 523 >gi|221059978|ref|XP_002260634.1| acetyl CoA synthetase [Plasmodium knowlesi strain H] gi|193810708|emb|CAQ42606.1| acetyl CoA synthetase, putative [Plasmodium knowlesi strain H] Length = 995 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 11/161 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R+IGPNC GI+ + KG+ +LS+SG + A+ + Q +G S + Sbjct: 160 RIIGPNCLGIIHSYHNMNASFADNTILKGNFSLLSQSGAICSAALDLSLQHNIGFSHFIS 219 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + +F +++E DE T+ I++ E G + +F+ K KPI+ Sbjct: 220 VGS--MCDVQFYELVEYLFYDENTKYILLYVESIG----DMNKFMAVCKKVCLYKPIILL 273 Query: 243 VAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +GKTA + H G+++ G E +MK+ G+ + Sbjct: 274 KSGKTAKAAEAAISHTGSMV----GNYEIFYASMKKLGVLV 310 >gi|313901732|ref|ZP_07835160.1| CoA-binding domain protein [Thermaerobacter subterraneus DSM 13965] gi|313467994|gb|EFR63480.1| CoA-binding domain protein [Thermaerobacter subterraneus DSM 13965] Length = 992 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 10/161 (6%) Query: 112 RVKARLEKSSSRLIGPNCPGIL-TPDSCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQ 169 R+ A++ R++GPNC G++ T ++ +F G V + S+SG L + Sbjct: 385 RLVAKVRGYGMRMVGPNCLGLINTAPDVRMNASFSPVFPPHGRVAMSSQSGALGLAILEY 444 Query: 170 TSQEGLGQSTAVGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 GLG ST V +G V G + I E DE T+ I++ E G+ +F + Sbjct: 445 ARDLGLGLSTFVSVGNKADVSGNDLIQYWE---DDEDTDLILLYLESFGNPR----RFAR 497 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 + GRKKPI+ AG+TA + G A ++ E Sbjct: 498 LARRVGRKKPILAVKAGRTAAGTKAAGSHTAALAASDTAVE 538 >gi|317121739|ref|YP_004101742.1| CoA-binding protein [Thermaerobacter marianensis DSM 12885] gi|315591719|gb|ADU51015.1| CoA-binding domain protein [Thermaerobacter marianensis DSM 12885] Length = 980 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 10/161 (6%) Query: 112 RVKARLEKSSSRLIGPNCPGIL-TPDSCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQ 169 R+ A++ R++GPNC G++ T ++ +F G V + S+SG L + Sbjct: 383 RLVAKVRGYGMRMVGPNCLGLINTAPDVRMNASFSPVFPPHGRVAMSSQSGALGLAILEY 442 Query: 170 TSQEGLGQSTAVGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 GLG ST V +G V G + I E DE T+ I++ E G+ +F + Sbjct: 443 ARDLGLGLSTFVSVGNKADVSGNDLIQYWE---EDEDTDLILLYLESFGNPR----RFAR 495 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 + GR+KPI+ AG+TA + G A ++ E Sbjct: 496 LARRVGRRKPILAVKAGRTAAGTKAAGSHTAALAASDTAVE 536 >gi|297569084|ref|YP_003690428.1| CoA-binding domain protein [Desulfurivibrio alkaliphilus AHT2] gi|296924999|gb|ADH85809.1| CoA-binding domain protein [Desulfurivibrio alkaliphilus AHT2] Length = 699 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 12/179 (6%) Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRLIGPN 128 VI VP S +A+ + + A + IT G +D ++ AR + RL+GPN Sbjct: 72 VIAVPRSLVEEAVEDCLAAGARAVAVITAGFKEMDATGAELEKKLAARCRQQQVRLLGPN 131 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 C G++ G + G++ ++S+SG L + ++ LG + V IG Sbjct: 132 CLGLINSHHRLNASFAGEMPACGNISVISQSGALATAILDLAAERHLGLAKLVSIGNK-- 189 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 +D+L DE T IV E S ++ F+K + KP++ +G T Sbjct: 190 ADLNEVDLLSALTDDEQTGVIVAYLEDISSGDD----FVKAATEASNHKPVIILKSGTT 244 >gi|298486521|ref|ZP_07004581.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158998|gb|EFI00059.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 49 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/45 (55%), Positives = 34/45 (75%) Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 1 MGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 45 >gi|269124720|ref|YP_003298090.1| CoA-binding domain-containing protein [Thermomonospora curvata DSM 43183] gi|268309678|gb|ACY96052.1| CoA-binding domain protein [Thermomonospora curvata DSM 43183] Length = 690 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 8/150 (5%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 R+ R+ ++ +R++GPNC G+ S ++ + G+ F GS+ I+S+SG L E + Sbjct: 113 RLAERIRRAGARIVGPNCLGLYDAGS-ELELAWGT-FVPGSIAIVSQSGQLGLELAGLAA 170 Query: 172 QEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 GLG S V IG V E LE ++ E T ++V+ E G+ E AA + Sbjct: 171 HAGLGVSRFVSIGNQVDVTAAEL---LEDLISHETTRTVVLYLENFGAGRELAAVMAR-- 225 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAV 260 ++ K IV V A H GA+ Sbjct: 226 LRQAGKHVIVLTVGASDAGRAAARSHTGAM 255 >gi|124267252|ref|YP_001021256.1| hypothetical protein Mpe_A2065 [Methylibium petroleiphilum PM1] gi|124260027|gb|ABM95021.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 897 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 14/177 (7%) Query: 108 LDMVRVKARLEKSSS---RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTY 164 LD +R +A L+ + R++GPNC G+LTP + G + +S+SG L Sbjct: 104 LDAMRKQALLDAARPHLLRVLGPNCLGLLTPAIGLNASFAHADALPGDIAFVSQSGALVT 163 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 + LG S V +G +F D+L+ +D T SI++ E + E Sbjct: 164 AVLDWARSRRLGFSHLVSLGEH--ADVDFGDLLDYLASDPQTRSILLYIE----SIESPR 217 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGI 280 +F+ R KP+V AG+ G + HA A +G G++ + A++ AG+ Sbjct: 218 KFMSAARAAARNKPVVVVKAGRA---GNGI-HAAASHTGALAGSDVVFDAAIRRAGM 270 >gi|288941452|ref|YP_003443692.1| CoA-binding domain-containing protein [Allochromatium vinosum DSM 180] gi|288896824|gb|ADC62660.1| CoA-binding domain protein [Allochromatium vinosum DSM 180] Length = 892 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 6/129 (4%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 ++ R++GPNC G++ P + + R+G+V ++S+SG + + + G+G Sbjct: 123 RRNRIRVMGPNCLGVMRPQHGLNASVGEDLPRRGNVALVSQSGAICTAMIDWSESRGVGF 182 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V IG +F D+L+ D T+ I++ E A F+ R K Sbjct: 183 SAVVSIGA--AADVDFGDILDYLALDTQTQCILLYVE----GIRHARHFMSGLRAAARLK 236 Query: 238 PIVGFVAGK 246 P+V AG+ Sbjct: 237 PVVIVKAGR 245 >gi|167043891|gb|ABZ08579.1| putative CoA-binding domain protein [uncultured marine crenarchaeote HF4000_APKG3H9] Length = 700 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 21/150 (14%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRK-----GSVGILSRSGTLTYEAVFQTSQEGLGQ 177 ++IGPNC G++ D M S F K G + ++S+SG + V S +G+G Sbjct: 124 KVIGPNCLGVMNLDP---KTMMNSTFLKITPKSGQIALVSQSGAICAALVEDASAQGIGF 180 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-- 235 S V + G+ TE DVL++ E T+ IVM E G+ +E FLK + + Sbjct: 181 SAVVSM-GNKADMTEN-DVLKMLADHEQTKVIVMYLEDMGNGQE----FLKVCKQITKYN 234 Query: 236 --KKPIVGFVAGKTAPPG--RTMGHAGAVI 261 KKP++ AG++ P G M H GA++ Sbjct: 235 EIKKPVLVLKAGRS-PEGAKAAMSHTGALM 263 >gi|171060913|ref|YP_001793262.1| GCN5-like N-acetyltransferase [Leptothrix cholodnii SP-6] gi|170778358|gb|ACB36497.1| GCN5-related N-acetyltransferase [Leptothrix cholodnii SP-6] Length = 904 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 13/182 (7%) Query: 101 ITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSG 160 ++ G+PV + A + L+GPN G P G + G + ++S+SG Sbjct: 109 LSSGVPVQPCAELHAIARRHGVHLLGPNSLGFQRPHLKLNASTAGRLANAGPLALVSQSG 168 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 LT + + G+G S+ + +G + + VL+ D AT+SI++ E Sbjct: 169 ALTASMLDWAACNGVGFSSVISLGAN--TAVDLPQVLDFLANDAATQSILVYLE----GI 222 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINA-MKEA 278 A +F+ KP+V AG+ R + H+ A++ G++D A ++ A Sbjct: 223 HNARRFMSALRAAASAKPVVVMKAGRQPAGSRAALTHSAAIV-----GSDDVFEAVLRRA 277 Query: 279 GI 280 G+ Sbjct: 278 GV 279 >gi|289705917|ref|ZP_06502295.1| succinyl-CoA synthetase subunit alpha domain protein [Micrococcus luteus SK58] gi|289557363|gb|EFD50676.1| succinyl-CoA synthetase subunit alpha domain protein [Micrococcus luteus SK58] Length = 59 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/55 (43%), Positives = 38/55 (69%) Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + + E+L Sbjct: 1 MAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAQLMREIL 55 >gi|326332639|ref|ZP_08198907.1| acetyltransferase, GNAT family [Nocardioidaceae bacterium Broad-1] gi|325949640|gb|EGD41712.1| acetyltransferase, GNAT family [Nocardioidaceae bacterium Broad-1] Length = 900 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 16/163 (9%) Query: 123 RLIGPNCPGILTPD-SCKIGI-MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPN G++ D KI + ++ +G G +SG L + + + GLG ST Sbjct: 319 RLIGPNALGVINTDPQVKINASLAPTMPPRGRAGFFCQSGALGSAILEKVNNRGLGLSTF 378 Query: 181 VGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V G V G D+L+ + D +TE ++M E G+ +F + + ++KPI Sbjct: 379 VSAGNRADVSGN---DLLQYWEEDVSTEVVMMYLESIGNPR----KFSRIARRVSQRKPI 431 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM-KEAGIC 281 V +G+T G MGHA IS ++AM ++AGI Sbjct: 432 VAVRSGRTT-QGVPMGHAVRKISAPPAA----VDAMFRQAGII 469 >gi|288931856|ref|YP_003435916.1| CoA-binding protein [Ferroglobus placidus DSM 10642] gi|288894104|gb|ADC65641.1| CoA-binding domain protein [Ferroglobus placidus DSM 10642] Length = 440 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 66/146 (45%), Gaps = 15/146 (10%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPNC GI P I KG + I S+SGT+ + ++G+G ST V Sbjct: 122 RIVGPNCQGINNTHHNFCASWP-LITMKGKIAIASQSGTVAAALAEWSQRDGIGFSTFVS 180 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + +DV+ F D+ TE I + E + +F+ EA + KKPIV Sbjct: 181 LGNKA--DVDEVDVINFFSEDKNTEVIALYIE----GVRDGRKFM--EAAKKSKKPIV-- 230 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGA 268 PG T A AV S K A Sbjct: 231 ----VLKPGVTERGAKAVQSHTKSMA 252 >gi|116619310|ref|YP_821466.1| CoA-binding domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116222472|gb|ABJ81181.1| CoA-binding domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 912 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 6/130 (4%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +K+ R+IGPNC G+++P S ++ R GSVG +S+SG L + + +E +G Sbjct: 137 QKAGIRIIGPNCLGVMSPLSGMNATFATAVARPGSVGFISQSGALCTAVLDWSLKEMVGF 196 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S + +G + + D++ D T+SIV+ E G+A FL + K Sbjct: 197 SAFISVGS--MVDVGWGDLIYYLGNDPKTKSIVIYMESIGNAR----SFLSAAREVALTK 250 Query: 238 PIVGFVAGKT 247 PI+ G++ Sbjct: 251 PIIIIKPGRS 260 >gi|283853308|ref|ZP_06370557.1| FdrA family protein [Desulfovibrio sp. FW1012B] gi|283571289|gb|EFC19300.1| FdrA family protein [Desulfovibrio sp. FW1012B] Length = 502 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 98/198 (49%), Gaps = 14/198 (7%) Query: 61 TVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 ++ EA R + AN ++I +P A ++ ++E + +++ ++ I + D +KA K Sbjct: 103 SLEEAVARLSGANFAMISLPGQLAKLDVVTALEQGLHVML-FSDNISLADEAELKALAAK 161 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 L+GP+C G + + + ++ R+G +G+ + SGT E + G G S Sbjct: 162 KGLLLMGPDC-GTAIINGVALAL--ANVVRRGEIGLAAASGTGIQEVTCLIDRFGGGVSH 218 Query: 180 AVGIGGDPVK----GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG +K GT + + AD AT+++V++ + G E + + DEA++ Sbjct: 219 AIGVGGRDLKKEVGGTMMRQAIRILAADPATKTLVVLSKPGAP---EVMETVLDEARQSG 275 Query: 236 KKPIVGFVAGK--TAPPG 251 + + + G AP G Sbjct: 276 LRVVTCLLGGDASAAPEG 293 >gi|294496302|ref|YP_003542795.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanohalophilus mahii DSM 5219] gi|292667301|gb|ADE37150.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanohalophilus mahii DSM 5219] Length = 697 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 13/170 (7%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 K R++GPNC GI+ P + S+ +G++ ++S+SG + + G+G Sbjct: 118 RKHDMRMVGPNCLGIMDPVAGLNASFAASMAYEGNIAMMSQSGAICTSTLDWAEANGMGF 177 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V +G G L F D +T I E + +QF++ RKK Sbjct: 178 SKFVSLGNKADLGEN--QFLAEFRDDPSTSVIAAYLE----GIKNGSQFIEIARDVSRKK 231 Query: 238 PIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKIN-AMKEAGICIAPS 285 P+V +G+TA R + H G + G++ N A +AG+ A + Sbjct: 232 PVVLVKSGRTAAGSRAVSSHTGTL-----AGSDQAYNAAFDKAGVVRADT 276 >gi|167042411|gb|ABZ07138.1| putative CoA-binding domain protein [uncultured marine crenarchaeote HF4000_ANIW97P9] Length = 451 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 25/179 (13%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK-----GSVGILSRSGTLTYEA 166 ++K K ++IGPNC G++ + M S F K G + ++S+SG + Sbjct: 113 KLKDIATKYGVKVIGPNCLGVMNLEP---KTMMNSTFLKITPKSGQIALVSQSGAICAAL 169 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 V S +G+G S V + G+ TE DVL++ E T+ IVM E G+ +E F Sbjct: 170 VEDASAQGIGFSAVVSM-GNKADMTEN-DVLKMLADHEQTKVIVMYLEDMGNGQE----F 223 Query: 227 LKDEAKRGR----KKPIVGFVAGKTAPPG--RTMGHAGAVISGGKGGAEDKINAMKEAG 279 LK + + KKP++ AG++ P G M H GA++ GK D + +K++G Sbjct: 224 LKVCKQITKYNEIKKPVLVLKAGRS-PEGAKAAMSHTGALL--GKDEIYDAV--LKQSG 277 >gi|332527130|ref|ZP_08403209.1| GCN5-like N-acetyltransferase [Rubrivivax benzoatilyticus JA2] gi|332111560|gb|EGJ11542.1| GCN5-like N-acetyltransferase [Rubrivivax benzoatilyticus JA2] Length = 874 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 17/215 (7%) Query: 71 ANASVIYVPPSG--AGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPN 128 A+ ++I +PP A I+ I LIV + G+P+ + ++ L+GPN Sbjct: 67 ADLALIALPPEQIPAALEIVGRIRCRAALIV--SSGLPLEACSELHQVAKRYGVHLLGPN 124 Query: 129 CPGILTPDSCKIGIMP-GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G P S K+ G + G +G++S+SG LT + G+G S + +G P Sbjct: 125 SMGFQRP-SLKLNASALGPLAAPGPLGLISQSGALTASILDWARHNGIGFSNVISLG--P 181 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + L+ D T+SI++ E A +F+ KP+V AG+ Sbjct: 182 NTAVDLPQALDFLANDGQTQSILVYME----GIRHARRFMSALRAAAYAKPVVVMKAGRK 237 Query: 248 APPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGIC 281 P G HA S GA+D + A++ AG+ Sbjct: 238 -PAG---SHAALTHSASIVGADDVFDAALRRAGVV 268 >gi|268323256|emb|CBH36844.1| putative acetyl-CoA synthetase, alpha subunit [uncultured archaeon] Length = 455 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 15/163 (9%) Query: 123 RLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R+IGPNC GI D+ I + ++G + IL++SG+ V + + EG+G + Sbjct: 127 RIIGPNCLGIYDTVSKMDTFFIPVERVKRLKRGRISILTQSGSFAEMIVDELASEGIGVA 186 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V G G + L + D+AT+ +V+ E + ++ +F++ ++ ++KP Sbjct: 187 RIVSYGNRVDVGE--TECLNFLVDDDATKVVVLYME----SVDDGRRFVEVASRCTKRKP 240 Query: 239 IVGFVAGKT-APPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +V GK A H GA+ G E A K+AGI Sbjct: 241 VVALKVGKREAGVHAAKSHTGAI----SGRYEIYRAAFKKAGI 279 >gi|320354363|ref|YP_004195702.1| CoA-binding domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320122865|gb|ADW18411.1| CoA-binding domain protein [Desulfobulbus propionicus DSM 2032] Length = 701 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 17/167 (10%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RL+GPNC GI+ I ++G + I S+SG L + + LG S ++ Sbjct: 124 RLLGPNCLGIINTAIKLNASFSKRIPQRGHLAIFSQSGALCTAMMDIADERELGVSKSIS 183 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE--EAAQFLKDEAKRGRKKPIV 240 I G+ TE +DVL D+ T+ IV G E+ + +F+K + +KP+V Sbjct: 184 I-GNKADITE-VDVLAALAQDDETKVIV------GYLEDISDGDKFVKAAQEASSRKPVV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKG--GAEDKINAMKEAGICIAPS 285 AG T + + V++G GA A K AGIC A S Sbjct: 236 ILKAGTTVAGTKAAANHTGVLAGKDTAYGA-----AFKRAGICRADS 277 >gi|268592358|ref|ZP_06126579.1| putative oxidoreductase subunit [Providencia rettgeri DSM 1131] gi|291312144|gb|EFE52597.1| putative oxidoreductase subunit [Providencia rettgeri DSM 1131] Length = 516 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 15/214 (7%) Query: 51 GGNVNVPVFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 GG + + T+ AK AN +VI V A ++E ++ ++ ++ + + D Sbjct: 94 GGGQHEAKYATINSAKTHIPDANLAVISVNGQFAAREARIALENDLN-VMLFSDNVSIED 152 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 + +K K ++GP+C + + + G+ R+GS+GI+ SGT + E + Sbjct: 153 ELALKQLASKKGLLMMGPDCGTAIINGTA---LCFGNSVRRGSIGIIGASGTGSQELSVR 209 Query: 170 TSQEGLGQSTAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + G G S +G GG + + G ID L++ AD+ T+ I ++ + A+ Sbjct: 210 IHEFGAGVSQLIGTGGRDLSEKIGGIMMIDALKMLDADDETQVIALISK---PPAPNVAK 266 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAP---PGRTMGH 256 + ++A++ K +V F+ + P PG T Sbjct: 267 KVLEQAEKCHKPVVVCFLGSQPLPEDKPGLTFAQ 300 >gi|126179647|ref|YP_001047612.1| CoA-binding domain-containing protein [Methanoculleus marisnigri JR1] gi|125862441|gb|ABN57630.1| CoA-binding domain protein [Methanoculleus marisnigri JR1] Length = 680 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 33/224 (14%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL--------DMVRVKARLEKSSSR 123 + +VI VP I E + + ++V IT G + D RV + +R Sbjct: 296 DMAVITVPAKHVPSVIEECGQKGVSMVVIITAGFKEMGEGGKALED--RVLEIAKGYGTR 353 Query: 124 LIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GPNC G++ P D+ + P + G++ +S+SG + V + ++ +G S Sbjct: 354 IVGPNCLGLIVPPKGIDTTYVHESP----KPGNIAFISQSGAIVNTVVDWSIRQDIGFSA 409 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVM-VGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + +G FID L D T+ I++ + EI ++ F+K ++ + KP Sbjct: 410 VISVGNQ--ADLNFIDFLRFVERDPKTKGIILYIEEI-----QDGKTFMKVVSEVSKTKP 462 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGG--KGGAEDKINAMKEAGI 280 +V +G +A G A A G G + + A +E+G+ Sbjct: 463 VVAIKSGSSA-----KGQAAASSHTGSLSGSYDVYMEAFRESGV 501 >gi|323097747|emb|CBJ18435.1| ATP citrate lyase [uncultured bacterium] Length = 335 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 13/126 (10%) Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPI 239 + IGGD G+ FID L + + ++++GE+GGS E + + + K G+ KPI Sbjct: 2 IAIGGDRFVGSVFIDNLLRLEKNPEVKYMILLGEVGGSEEYKVIEAI----KAGKLTKPI 57 Query: 240 VGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS----PARIGRS 292 + + G K G GHAGA + + AE K AM AG+ + S PA+I R Sbjct: 58 IAWCIGTIAKHYDSGVQFGHAGASANDDRETAETKNKAMAAAGMHVPASFNDLPAKI-RE 116 Query: 293 LVELLG 298 + E L Sbjct: 117 VYESLN 122 >gi|296270349|ref|YP_003652981.1| CoA-binding domain-containing protein [Thermobispora bispora DSM 43833] gi|296093136|gb|ADG89088.1| CoA-binding domain protein [Thermobispora bispora DSM 43833] Length = 887 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 31/218 (14%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---------PVLDMVRVKARLEKSSS 122 + +V+ VP G D + E E + ++ ++ G ++VR+ Sbjct: 258 DLAVLAVPAEGVLDLVRECAEKGVKGLIVVSSGFGETGPEGRARQQELVRIA---RAYGM 314 Query: 123 RLIGPNCPGILTPD-SCKI-GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R++GPNC GI D + ++ + ++ +G VG +SG L + + +Q G+G ST Sbjct: 315 RVVGPNCLGIANTDPAVRLNATLAATLPSRGRVGFFCQSGALGTALLQRVAQRGMGISTF 374 Query: 181 VGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V G V G D L+ + D AT+ I++ E G+ +F + + +KKPI Sbjct: 375 VSAGNRADVSGN---DCLQYWEEDPATDVILLYLESLGNPR----KFARLARRISKKKPI 427 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKE 277 V V PP GHA V+ G +D + ++ E Sbjct: 428 V-MVKSPGVPP----GHAAPVL----GLPDDALRSLFE 456 >gi|311742661|ref|ZP_07716470.1| GNAT family acetyltransferase [Aeromicrobium marinum DSM 15272] gi|311314289|gb|EFQ84197.1| GNAT family acetyltransferase [Aeromicrobium marinum DSM 15272] Length = 903 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 21/216 (9%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP---VLDMVR 112 +P + TV + + +++ VP D +++ + +V I+ G V R Sbjct: 250 LPAYKTVQDIPGEV--DVAIVAVPAESVADVVLDCAAKGVHGLVVISAGFAEEGVEGRRR 307 Query: 113 VKARLEKSSS---RLIGPNCPGIL--TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 +A + S S RLIGPNC G++ P + ++ +G VG +SG L + Sbjct: 308 QRALVGLSRSYGLRLIGPNCLGVINTAPGVQLNASLSPAMPPQGRVGFFCQSGALGTAIL 367 Query: 168 FQTSQEGLGQSTAVGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 S+ GLG ST V G V G D+L+ + D++TE +++ E G+ +F Sbjct: 368 ESVSRRGLGLSTFVSAGNRADVSGN---DLLQYWQEDDSTEVVLLYLESIGNPR----KF 420 Query: 227 LKDEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGA 259 + + KPIV +G++ P G T+ A Sbjct: 421 SRIARRVSSTKPIVAVKSGRSTQGVPVGHTVRRTSA 456 >gi|13924583|gb|AAK49062.1|AF258270_1 succinyl-CoA-ligase alpha subunit [Brassica oleracea] Length = 43 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 25/43 (58%), Positives = 26/43 (60%) Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 EAVFQT GL QST VGIG DP G F+D LE F D E Sbjct: 1 EAVFQTXAVGLXQSTCVGIGEDPFNGXNFVDCLEKFXVDPQAE 43 >gi|312114476|ref|YP_004012072.1| CoA-binding protein [Rhodomicrobium vannielii ATCC 17100] gi|311219605|gb|ADP70973.1| CoA-binding domain protein [Rhodomicrobium vannielii ATCC 17100] Length = 911 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 11/159 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R+IGPNC G+ P + + GSV ++S+SG +T + S EG+G S V Sbjct: 122 RIIGPNCLGMQVPRLGLDASFAQVLGKAGSVALVSQSGAITTAMLDWASVEGVGFSHVVS 181 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IG + D+L+ + + ++ + E G +A +F+ + R KP++ Sbjct: 182 IGD--AADVDLGDMLDYLAGETTSRAVFLYIESVG----DARKFMSAARRCARVKPVIAI 235 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGI 280 AG+ P G A A +G G+++ A++ AG+ Sbjct: 236 KAGRH-PEG---AKAAASHTGALAGSDNVYGAALRRAGV 270 >gi|256811312|ref|YP_003128681.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanocaldococcus fervens AG86] gi|256794512|gb|ACV25181.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanocaldococcus fervens AG86] Length = 699 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 83/175 (47%), Gaps = 16/175 (9%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQT 170 ++K +K + R+IGPNC GI+ + +F KG V I+S+SG + + Sbjct: 110 KIKEIAKKYNIRVIGPNCLGIMNT-HINLNATFAKVFPPKGGVSIISQSGAVLNAILDIA 168 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 +G S V IG + D+LE FL DE T+ +V+ I G ++ +FLK Sbjct: 169 PLLNIGFSKVVSIGNKA--DIQESDLLEYFLNDEDTKIVVLY--IEGLKDK---RFLKVA 221 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN--AMKEAGICIA 283 K +KKPI+ +G+T +G A G ED I A KEAGI A Sbjct: 222 KKLSKKKPIIALKSGRT-----EVGKKAAKSHTGSLAGEDVIYEAAFKEAGIVRA 271 >gi|156101812|ref|XP_001616599.1| acetyl CoA synthetase [Plasmodium vivax SaI-1] gi|148805473|gb|EDL46872.1| acetyl CoA synthetase, putative [Plasmodium vivax] Length = 994 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 11/161 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R+IGPNC GI+ + KG+ +LS+SG + A+ + Q +G S + Sbjct: 159 RIIGPNCLGIIHSYHNMNASFADNQILKGNFSLLSQSGAICSAALDLSLQHNIGFSHFIS 218 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + +F +++E DE T+ I++ E G + +F+ K KPI+ Sbjct: 219 VGS--MCDVQFFELVEYLFYDENTKYILLYVESIG----DMNKFVAVCKKVCLYKPIILL 272 Query: 243 VAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +GKTA + H G+++ G E +M++ G+ + Sbjct: 273 KSGKTAKAAEAAISHTGSMV----GNYEIFYASMRKLGVLV 309 >gi|157382714|gb|ABV48795.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA26] gi|157382718|gb|ABV48797.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA29] gi|157382722|gb|ABV48799.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA36] gi|157382724|gb|ABV48800.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA37] gi|157382726|gb|ABV48801.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA39] gi|157382728|gb|ABV48802.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA40] Length = 348 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 8/109 (7%) Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPI 239 + IGGD G++F+D + F + + +V++GE+GG E A+ +KD GR KP+ Sbjct: 2 IAIGGDRFPGSDFLDHMLRFEKNPQVKMMVLLGEVGGELEYRVAEAIKD----GRITKPV 57 Query: 240 VGFVAGKTAPP---GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + + G + GHAGA + A+ K A++EAG + S Sbjct: 58 IAWCIGTISKHFGGEVQFGHAGAKAGAERETADAKNEALREAGAYVPKS 106 >gi|242312154|ref|ZP_04811171.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 1106b] gi|242135393|gb|EES21796.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 1106b] Length = 737 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 141 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 200 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 201 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 254 Query: 243 VAGK 246 AG+ Sbjct: 255 RAGR 258 >gi|146312785|ref|YP_001177859.1| FdrA family protein [Enterobacter sp. 638] gi|145319661|gb|ABP61808.1| FdrA family protein [Enterobacter sp. 638] Length = 513 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 49/204 (24%), Positives = 98/204 (48%), Gaps = 17/204 (8%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK R +N ++I V A +++E + +++ ++ + + D + +K Sbjct: 99 YATLASAKTHRPESNLAIISVNGLFAAREARQALENGLNVML-FSDNVSLDDELALKQLA 157 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G +GI+ SGT + E + + G G Sbjct: 158 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGPIGIVGASGTGSQELSARIHEFGGGI 214 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGE--IGGSAEEEAAQFLKDEA 231 S +G GG + + G +D +++ AD+AT+ I ++ + AE+ A+ Sbjct: 215 SQLIGTGGRDLSEKIGGLMMLDAIDMLEADDATQVITLISKPPAPSVAEKVLAR------ 268 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMG 255 R +KP+V G+ APP G Sbjct: 269 ARACRKPVVVCFLGRNAPPADEDG 292 >gi|126446526|ref|YP_001077607.1| acetyltransferase [Burkholderia mallei NCTC 10247] gi|254177172|ref|ZP_04883828.1| acetyltransferase, GNAT family [Burkholderia mallei ATCC 10399] gi|126239380|gb|ABO02492.1| acetyltransferase, GNAT family [Burkholderia mallei NCTC 10247] gi|160698212|gb|EDP88182.1| acetyltransferase, GNAT family [Burkholderia mallei ATCC 10399] Length = 787 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 125 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 185 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 238 Query: 243 VAGK 246 AG+ Sbjct: 239 RAGR 242 >gi|53723144|ref|YP_112129.1| acetyl-CoA synthetase [Burkholderia pseudomallei K96243] gi|167821283|ref|ZP_02452963.1| acetyltransferase, GNAT family protein [Burkholderia pseudomallei 91] gi|167829621|ref|ZP_02461092.1| acetyltransferase, GNAT family protein [Burkholderia pseudomallei 9] gi|167916387|ref|ZP_02503478.1| acetyltransferase, GNAT family protein [Burkholderia pseudomallei 112] gi|52213558|emb|CAH39611.1| putative acetyl-CoA synthetase [Burkholderia pseudomallei K96243] Length = 787 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 125 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 185 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 238 Query: 243 VAGK 246 AG+ Sbjct: 239 RAGR 242 >gi|254300769|ref|ZP_04968213.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 406e] gi|157811321|gb|EDO88491.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 406e] Length = 853 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 191 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 250 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 251 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 304 Query: 243 VAGK 246 AG+ Sbjct: 305 RAGR 308 >gi|217422763|ref|ZP_03454266.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 576] gi|217394994|gb|EEC35013.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 576] Length = 811 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 149 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 208 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 209 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 262 Query: 243 VAGK 246 AG+ Sbjct: 263 RAGR 266 >gi|238063481|ref|ZP_04608190.1| GCN5 N-acetyltransferase [Micromonospora sp. ATCC 39149] gi|237885292|gb|EEP74120.1| GCN5 N-acetyltransferase [Micromonospora sp. ATCC 39149] Length = 682 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 13/133 (9%) Query: 123 RLIGPNCPGILTPDS---CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R++GPNC G+ D + P ++ G VGI S+SGT + + ++ GLG S+ Sbjct: 318 RVVGPNCLGVANTDEDVRLNATLAP-ALPAPGRVGIFSQSGTFGVALLAEAARRGLGLSS 376 Query: 180 AVGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V G V G D+L+ + D T+ I++ E G+ +F + + GR KP Sbjct: 377 FVSAGNRADVSGN---DLLQYWQDDPGTDVIMLYLETFGNPR----KFARLARRIGRDKP 429 Query: 239 IVGFVAGKTAPPG 251 +V A PPG Sbjct: 430 VVAL-ASPARPPG 441 >gi|167899732|ref|ZP_02487133.1| acetyltransferase, GNAT family protein [Burkholderia pseudomallei 7894] gi|167924246|ref|ZP_02511337.1| acetyltransferase, GNAT family protein [Burkholderia pseudomallei BCC215] gi|237508617|ref|ZP_04521332.1| acetyltransferase, gnat family [Burkholderia pseudomallei MSHR346] gi|235000822|gb|EEP50246.1| acetyltransferase, gnat family [Burkholderia pseudomallei MSHR346] Length = 787 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 125 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 185 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 238 Query: 243 VAGK 246 AG+ Sbjct: 239 RAGR 242 >gi|126443597|ref|YP_001063990.1| acetyltransferase [Burkholderia pseudomallei 668] gi|226193991|ref|ZP_03789592.1| acetyltransferase, GNAT family [Burkholderia pseudomallei Pakistan 9] gi|254185707|ref|ZP_04892225.1| acetyltransferase, GNAT family [Burkholderia pseudomallei Pasteur 52237] gi|126223088|gb|ABN86593.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 668] gi|157933393|gb|EDO89063.1| acetyltransferase, GNAT family [Burkholderia pseudomallei Pasteur 52237] gi|225933936|gb|EEH29922.1| acetyltransferase, GNAT family [Burkholderia pseudomallei Pakistan 9] Length = 803 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 141 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 200 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 201 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 254 Query: 243 VAGK 246 AG+ Sbjct: 255 RAGR 258 >gi|88601867|ref|YP_502045.1| CoA-binding [Methanospirillum hungatei JF-1] gi|88187329|gb|ABD40326.1| CoA-binding protein [Methanospirillum hungatei JF-1] Length = 688 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 21/171 (12%) Query: 118 EKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +R++GPNC G++ P D+ + P G++ +S+SG + V + + Sbjct: 349 HRYGTRIVGPNCLGLIIPPIGLDTTYVAQSPNP----GNIAFISQSGAIVNTVVDWSLTK 404 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G S V +G F D L AD T+ I+M E + F++ ++ Sbjct: 405 DIGFSFVVSVGNQ--ADLNFFDYLRAAAADPETKVIIMYIE----QIKNGKAFMEIVSEV 458 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGG--KGGAEDKINAMKEAGICI 282 R KP+V AG +A G A A G G + + A +++G+ + Sbjct: 459 SRHKPVVALKAGSSA-----RGQAAAASHTGSLSGSYDVYVEAFRKSGVLL 504 >gi|90425520|ref|YP_533890.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris BisB18] gi|90107534|gb|ABD89571.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris BisB18] Length = 899 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 10/152 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPNC G++ P + G + ++S+SG + V +++ +G S V Sbjct: 125 RLIGPNCLGVMLPGVHLNASFAAHMPNAGHLALISQSGAIAAGMVDWAAEKSIGFSGIVS 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IG + D+L+ F D T +I++ E A ++A +F+ R KP+V Sbjct: 185 IGDQ--LDVDIADLLDHFALDVQTRAILLYIE----AVKDARKFMSAARAAARIKPVVVV 238 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 +G+ A + A A +G GA+ +A Sbjct: 239 KSGRMAQGAK----AAATHTGALAGADAVYDA 266 >gi|121597730|ref|YP_991148.1| acetyltransferase [Burkholderia mallei SAVP1] gi|124381731|ref|YP_001025540.1| acetyltransferase [Burkholderia mallei NCTC 10229] gi|121225528|gb|ABM49059.1| acetyltransferase, GNAT family [Burkholderia mallei SAVP1] gi|261826473|gb|ABM99802.2| acetyltransferase, GNAT family [Burkholderia mallei NCTC 10229] Length = 803 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 141 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 200 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 201 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 254 Query: 243 VAGK 246 AG+ Sbjct: 255 RAGR 258 >gi|167908040|ref|ZP_02495245.1| acetyltransferase, GNAT family protein [Burkholderia pseudomallei NCTC 13177] Length = 853 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 191 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 250 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 251 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 304 Query: 243 VAGK 246 AG+ Sbjct: 305 RAGR 308 >gi|167851102|ref|ZP_02476610.1| acetyltransferase, GNAT family protein [Burkholderia pseudomallei B7210] gi|254265586|ref|ZP_04956451.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 1710a] gi|254216588|gb|EET05973.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 1710a] Length = 853 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 191 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 250 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 251 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 304 Query: 243 VAGK 246 AG+ Sbjct: 305 RAGR 308 >gi|254203112|ref|ZP_04909474.1| acetyltransferase, GNAT family [Burkholderia mallei FMH] gi|147746157|gb|EDK53235.1| acetyltransferase, GNAT family [Burkholderia mallei FMH] Length = 803 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 141 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 200 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 201 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 254 Query: 243 VAGK 246 AG+ Sbjct: 255 RAGR 258 >gi|167725154|ref|ZP_02408390.1| acetyltransferase, GNAT family protein [Burkholderia pseudomallei DM98] Length = 528 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 191 RVVGPGSLGVVSPALGAHFGAPACIVKVGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 250 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 251 LGGE--ADVDAADVLDYLASDAETRTILLELDTVKSAR----KFMSAARAAARNKPVLAL 304 Query: 243 VAGK 246 AG+ Sbjct: 305 RAGR 308 >gi|126456794|ref|YP_001076911.1| acetyltransferase [Burkholderia pseudomallei 1106a] gi|126230562|gb|ABN93975.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 1106a] Length = 803 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 141 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 200 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 201 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 254 Query: 243 VAGK 246 AG+ Sbjct: 255 RAGR 258 >gi|33600561|ref|NP_888121.1| hypothetical protein BB1576 [Bordetella bronchiseptica RB50] gi|33568160|emb|CAE32073.1| Conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 498 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 10/140 (7%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPNC G+ +P + ++ G VG++ +SG L + + + Q GL S V Sbjct: 127 RVVGPNCLGVYSPRA-RVSFTRRVTDEAGHVGVVCQSGGLGTDIIRRGQQRGLRFSGLVT 185 Query: 183 IGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 IG V +E LE FLADE T I M E + + + + + G +KP+V Sbjct: 186 IGNAVDVSASEL---LEYFLADEQTRVIGMYLE----SARDGRRLFEVLRQAGCRKPVVL 238 Query: 242 FVAGKTAPPGRTM-GHAGAV 260 G TA R H GA+ Sbjct: 239 LKGGGTAQGRRAASSHTGAL 258 >gi|134278418|ref|ZP_01765132.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 305] gi|134250202|gb|EBA50282.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 305] Length = 787 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 125 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 185 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 238 Query: 243 VAGK 246 AG+ Sbjct: 239 RAGR 242 >gi|126651200|ref|ZP_01723410.1| putative oxidoreductase subunit [Bacillus sp. B14905] gi|126592038|gb|EAZ86104.1| putative oxidoreductase subunit [Bacillus sp. B14905] Length = 517 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 8/148 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +VI V + A +++E ++ ++ ++ + V D V +K ++GP+C Sbjct: 115 ANFAVISVNGAFAVREARKALENDLH-VMLFSDNVSVEDEVELKTLAHDKGLLMMGPDCG 173 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG----D 186 + + IG+ + RKGS+GI++ SGT + E + G G + +G GG Sbjct: 174 TAIISN---IGLAFANAVRKGSIGIVAASGTGSQEVSVRIHDFGGGITQLIGTGGRDLSK 230 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGE 214 V G +D ++ ADEAT+ IV+V + Sbjct: 231 EVGGIMMLDGIQALDADEATKVIVLVSK 258 >gi|254254733|ref|ZP_04948050.1| Acyl-CoA synthetase (NDP forming) [Burkholderia dolosa AUO158] gi|124899378|gb|EAY71221.1| Acyl-CoA synthetase (NDP forming) [Burkholderia dolosa AUO158] Length = 819 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+LTP P R G V +S+S LT + GLG S V Sbjct: 153 RIVGPGSLGVLTPARRAHFGAPAYTVRPGGVAWVSQSNALTNAVLGWADARGLGFSHVVA 212 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + DVL+ +D T +I++ + +A +F+ R KP++ Sbjct: 213 LGSE--ADVDAGDVLDYLASDPGTRAILLELDTVSAAR----KFMSAARAAARNKPVLAL 266 Query: 243 VAGKTAP 249 G+T P Sbjct: 267 RTGRTDP 273 >gi|53716388|ref|YP_105168.1| acetyltransferase [Burkholderia mallei ATCC 23344] gi|254208446|ref|ZP_04914795.1| acetyltransferase, GNAT family [Burkholderia mallei JHU] gi|52422358|gb|AAU45928.1| acetyltransferase, GNAT family [Burkholderia mallei ATCC 23344] gi|147751133|gb|EDK58201.1| acetyltransferase, GNAT family [Burkholderia mallei JHU] Length = 787 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 125 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 185 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 238 Query: 243 VAGK 246 AG+ Sbjct: 239 RAGR 242 >gi|251768286|ref|ZP_02270153.2| acetyltransferase, GNAT family [Burkholderia mallei PRL-20] gi|254184466|ref|ZP_04891055.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 1655] gi|184215058|gb|EDU12039.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 1655] gi|243060287|gb|EES42473.1| acetyltransferase, GNAT family [Burkholderia mallei PRL-20] Length = 853 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 191 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 250 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 251 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 304 Query: 243 VAGK 246 AG+ Sbjct: 305 RAGR 308 >gi|167744079|ref|ZP_02416853.1| acetyltransferase, GNAT family protein [Burkholderia pseudomallei 14] Length = 853 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 191 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 250 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 251 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 304 Query: 243 VAGK 246 AG+ Sbjct: 305 RAGR 308 >gi|297527188|ref|YP_003669212.1| CoA-binding domain protein [Staphylothermus hellenicus DSM 12710] gi|297256104|gb|ADI32313.1| CoA-binding domain protein [Staphylothermus hellenicus DSM 12710] Length = 461 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 8/130 (6%) Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIF---RKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R+IGPNC GI S +P +KG + +S+SG + + +G S Sbjct: 124 RIIGPNCLGIYDNWSGVDTFFLPDEKMMRPKKGYISFISQSGAFASALLDWMAYRNIGVS 183 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 A+ G + ID++E DE T+ I+M E G F+ K KKP Sbjct: 184 RAISYGNKI--DVDDIDLIEYLREDEKTKLIIMYLE--GLKPGRGRLFIDKARKVVEKKP 239 Query: 239 IVGFVAGKTA 248 IV + AGKTA Sbjct: 240 IVIYKAGKTA 249 >gi|270208663|ref|YP_003329434.1| hypothetical protein pSmeSM11ap136 [Sinorhizobium meliloti] gi|76880937|gb|ABA56107.1| conserved hypothetical protein [Sinorhizobium meliloti] Length = 899 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 17/188 (9%) Query: 99 VCITEGIPVLDMVRVKARLEKSSS---RLIGPNCPGILTPDSCKIGIMPGSI-FRKGSVG 154 V IT GI +R +A L+ + R++GPN G++ P S K+ + + G + Sbjct: 98 VIITAGISADKALR-QAMLDAAKPFLLRVVGPNTVGLIVP-SAKLNASFAHLQAQPGGIA 155 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 +LS+SG +T + + +G S + +G + + D L+LF D T +I+M E Sbjct: 156 LLSQSGAITTSLIDWAADNNVGFSKIISLGD--MADADAGDFLDLFAGDPETHAIIMYLE 213 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN- 273 S +FL R KP+V AG+ + A A +G GA+ ++ Sbjct: 214 TISSPR----KFLAAARAAARVKPVVAIKAGRHTEAAK----AAATHTGALSGADRVVDA 265 Query: 274 AMKEAGIC 281 A+ AGI Sbjct: 266 ALHRAGIL 273 >gi|161519829|ref|YP_001583256.1| GCN5-related N-acetyltransferase [Burkholderia multivorans ATCC 17616] gi|160343879|gb|ABX16964.1| GCN5-related N-acetyltransferase [Burkholderia multivorans ATCC 17616] Length = 846 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+L+P P R G V +S+S LT + + GLG S V Sbjct: 186 RIVGPGSLGVLSPARHAHFGAPAYTVRSGGVAWVSQSNALTNAVLGWANARGLGFSHVVA 245 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ E+ + A +F+ R KP++ Sbjct: 246 LGGE--ADVDAGDVLDYLASDPGTRAILL--EL--DSVRAARKFMSAARAAARNKPVLAL 299 Query: 243 VAGKTAP 249 G+ P Sbjct: 300 RTGRADP 306 >gi|254168160|ref|ZP_04875007.1| CoA binding domain protein [Aciduliprofundum boonei T469] gi|197622926|gb|EDY35494.1| CoA binding domain protein [Aciduliprofundum boonei T469] Length = 451 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 15/171 (8%) Query: 118 EKSSSRLIGPNCPGILTPDS---CKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQTSQE 173 +K ++R+IGPN GI P + + + S F G + +++SG L + S Sbjct: 105 KKYNARIIGPNTVGIYIPSTGVNTALVVPERSRFPGDGDIAFITQSGALGLLTMDSVSMY 164 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G S+ + +G + V E ++L+ F DE ++ I+M E + E F++ Sbjct: 165 DVGFSSFINLG-NRVDVNEN-ELLQYFGKDEKSKVIIMYIESFANGRE----FMRVAKNV 218 Query: 234 GRKKPIVGFVAGKTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGICIA 283 RKKPIV AG+T GR H GA+ GG D A K+ G+ A Sbjct: 219 SRKKPIVVLKAGRTKRGGRAASLHTGAL--GGSDAVAD--GAFKQCGVIRA 265 >gi|238563905|ref|ZP_04610793.1| acetyltransferase, GNAT family [Burkholderia mallei GB8 horse 4] gi|238519704|gb|EEP83172.1| acetyltransferase, GNAT family [Burkholderia mallei GB8 horse 4] Length = 683 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 87 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 146 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 147 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 200 Query: 243 VAGK 246 AG+ Sbjct: 201 RAGR 204 >gi|154243927|ref|YP_001409500.1| CoA-binding domain-containing protein [Xanthobacter autotrophicus Py2] gi|154163049|gb|ABS70264.1| CoA-binding domain protein [Xanthobacter autotrophicus Py2] Length = 727 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 41/231 (17%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIEAEIPLI 98 I P+ G GG V + V + E +R A AN S + P G A+I + EIP I Sbjct: 55 IAPQSG----FGGEV-IAVHPKLTEILDRPAYANLSAV---PGGVDLAVIVAPPGEIPAI 106 Query: 99 V--CITEGIPVLDMV----------------RVKARLEKSSSRLIGPNCPGILTPD---S 137 + C +PV ++ R+ A RLIGPNC G+++ + Sbjct: 107 MVDCAAARVPVAIIISGGFAETGDAGRMLEQRIVATARSGGVRLIGPNCFGVISASAGLN 166 Query: 138 CKIGI-MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 +GI MP +G + + ++SG A Q+ +E +G S V G + DV Sbjct: 167 ASLGIGMPA----QGGIALYTQSGAYGMAAFTQSQEELIGFSRVVACGNK--VDLDETDV 220 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 L+ F D T I M+ E G + +F + + ++KPIV G++ Sbjct: 221 LQAFGEDPETRVIAMLLESIG----DGRRFFEAAREIAQRKPIVILKTGRS 267 >gi|153006019|ref|YP_001380344.1| GCN5-ike N-acetyltransferase [Anaeromyxobacter sp. Fw109-5] gi|152029592|gb|ABS27360.1| GCN5-related N-acetyltransferase [Anaeromyxobacter sp. Fw109-5] Length = 812 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 19/151 (12%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RL+GPN G+ PD+ GS+G++S+SG L A+ + +G S V Sbjct: 128 RLLGPNSVGLARPDARLNATFTSGSASPGSIGLVSQSGALCATALDWAAAHRIGFSAVVS 187 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G +F +VLE D AT+S+++ E +A FL R KP+V Sbjct: 188 LGD--ALDVDFGEVLEYLALDPATKSVLLYVETLRAAR----PFLSGLRLAARLKPVVVV 241 Query: 243 VAGKT------APPGRT-------MGHAGAV 260 AG+ APP + + AGAV Sbjct: 242 KAGRHGAGADGAPPASSDDAFDAALARAGAV 272 >gi|325959383|ref|YP_004290849.1| CoA-binding domain-containing protein [Methanobacterium sp. AL-21] gi|325330815|gb|ADZ09877.1| CoA-binding domain protein [Methanobacterium sp. AL-21] Length = 695 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 65/257 (25%), Positives = 107/257 (41%), Gaps = 34/257 (13%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 I+PK G + +P T++ K+ + +VI +P A+ + E I +V Sbjct: 42 INPKGGEV------MGIPAHTSI---KDYGYVDLAVIVIPAPLVLRAVRDCGETGIKNVV 92 Query: 100 CITEGIPVLDMVRVKARLEKS--------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 I+ G + ARLEK + L+GPNC GI+ + I KG Sbjct: 93 VISAGFK--EASEEGARLEKELVEICNEFNINLVGPNCLGIMNTYNDMNASFSSDIAHKG 150 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV- 210 +G +++SG + + ++ +G S + +G G + +E F+ DE T I Sbjct: 151 KIGFMTQSGAIFAAILDYADKKNIGFSRLISLGNK--AGVNEKECMENFMEDENTGVITA 208 Query: 211 -MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGA 268 + G + G F++ K +KKP+V +G TA + H G + G A Sbjct: 209 YLEGIVDGPG------FIQASRKASKKKPVVVIKSGTTAKGSEAVSSHTGTI--AGSDSA 260 Query: 269 EDKINAMKEAGICIAPS 285 D A + GI A S Sbjct: 261 YDA--AFSQCGILRASS 275 >gi|189353992|ref|YP_001949619.1| hypothetical protein BMULJ_05245 [Burkholderia multivorans ATCC 17616] gi|189338014|dbj|BAG47083.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] Length = 785 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+L+P P R G V +S+S LT + + GLG S V Sbjct: 125 RIVGPGSLGVLSPARHAHFGAPAYTVRSGGVAWVSQSNALTNAVLGWANARGLGFSHVVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ E+ + A +F+ R KP++ Sbjct: 185 LGGE--ADVDAGDVLDYLASDPGTRAILL--EL--DSVRAARKFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAP 249 G+ P Sbjct: 239 RTGRADP 245 >gi|91773323|ref|YP_566015.1| Acyl-CoA synthetase [Methanococcoides burtonii DSM 6242] gi|91712338|gb|ABE52265.1| Acetyl-CoA synthetase (ADP-forming), alpha and beta subunits [Methanococcoides burtonii DSM 6242] Length = 696 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 14/154 (9%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPNC GI+ S S+ +KG++ ++S+SG + + G+G S + Sbjct: 123 RMVGPNCLGIIDTASGLNASFAASMAKKGNISMMSQSGAICTSTLDWADARGVGFSKFIS 182 Query: 183 IGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G + +F+ +E DE T I E ++ +F++ K RKKPI+ Sbjct: 183 LGNKADLSENDFLLEME---DDENTAVIAAYLE----GVKDGPKFMEIARKVSRKKPIIV 235 Query: 242 FVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINA 274 +G+TA R + H G + G+++ NA Sbjct: 236 IKSGRTAVGSRAVSSHTGTL-----AGSDEAYNA 264 >gi|221200669|ref|ZP_03573710.1| acetyltransferase, gnat family [Burkholderia multivorans CGD2M] gi|221208498|ref|ZP_03581500.1| acetyltransferase, gnat family [Burkholderia multivorans CGD2] gi|221171686|gb|EEE04131.1| acetyltransferase, gnat family [Burkholderia multivorans CGD2] gi|221179241|gb|EEE11647.1| acetyltransferase, gnat family [Burkholderia multivorans CGD2M] Length = 784 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+L+P P R G V +S+S LT + + GLG S V Sbjct: 125 RIVGPGSLGVLSPARHAHFGAPAYTVRSGGVAWVSQSNALTNAVLGWANARGLGFSHVVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ E+ + A +F+ R KP++ Sbjct: 185 LGGE--ADVDAGDVLDYLASDPGTRAILL--EL--DSVRAARKFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAP 249 G+ P Sbjct: 239 RTGRADP 245 >gi|301632056|ref|XP_002945107.1| PREDICTED: uncharacterized protein yfiQ-like [Xenopus (Silurana) tropicalis] Length = 900 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 13/215 (6%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 ++T A+ ++I +PP+ A+ + + ++ GI +++ + + L+G Sbjct: 65 KQTRADLAIIALPPAEQAAALEVAGHLHCRAALIVSSGIEAQQAAQLQRIARRENVHLLG 124 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN GI P G + GS+ ++S+SG LT + + G+G S+ + +G Sbjct: 125 PNSLGIQRPSLQLNASTVGPLAHAGSMALVSQSGALTAATLDWANGNGVGFSSVISVG-- 182 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P + L+ D T SI + E G S A +F+ KP+V +G+ Sbjct: 183 PHASIGLTEALDFLANDPHTHSIAVCME-GIS---NARRFMSALRSAAHSKPVVVLKSGR 238 Query: 247 TAPPGRTMGHAGAVI-SGGKGGAEDKIN-AMKEAG 279 R+ G A A+ S G++D + A++ AG Sbjct: 239 -----RSAGSAAALTHSATIVGSDDVFDAALRRAG 268 >gi|302039142|ref|YP_003799464.1| putative acyl-CoA synthetase [Candidatus Nitrospira defluvii] gi|300607206|emb|CBK43539.1| putative Acyl-CoA synthetase (NDP forming) [Candidatus Nitrospira defluvii] Length = 911 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 8/156 (5%) Query: 116 RLEKSSSRLIGPNCPGILTPD-SCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQTSQE 173 ++ + R++GPNC GIL D + ++ S F GS+ + S+SG L + + + Sbjct: 320 KVRQQGLRMVGPNCFGILNTDPAVRLNATFTSTFPLAGSIAMSSQSGALGLALLAASERL 379 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG ST V +G D+L+ + D AT I++ E G+ +F + + Sbjct: 380 QLGLSTFVSVGNK--ADVSVNDLLQYWENDPATNVILLYVESFGNPR----RFAQIARRV 433 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 R KPIV AG+T+ R G A ++ E Sbjct: 434 SRNKPIVVLKAGRTSSGKRAAGSHTAALAANDVAVE 469 >gi|170078619|ref|YP_001735257.1| acetyl-CoA synthetase [Synechococcus sp. PCC 7002] gi|169886288|gb|ACB00002.1| acetyl-CoA synthetase [Synechococcus sp. PCC 7002] Length = 915 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 7/139 (5%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R+IGPNC G++ P S ++ + G VG +S+SG + + E +G S + Sbjct: 145 RIIGPNCLGLMNPHSGLNATFAHAMAQPGHVGFISQSGAFCTAVLDWSFPENVGFSAFIS 204 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + D++ D T+SIV+ E G +A FL + KPI+ Sbjct: 205 LGS--MLDVNWGDLITYLGDDPNTKSIVIYMESVG----DARSFLSAAREVAIAKPIIVI 258 Query: 243 VAGKTAPPGR-TMGHAGAV 260 AG+T + + H G++ Sbjct: 259 KAGRTEAAAKASASHTGSL 277 >gi|167617147|ref|ZP_02385778.1| acetyltransferase, GNAT family protein [Burkholderia thailandensis Bt4] Length = 779 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 117 RVVGPGSLGVVSPALNAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D +T +I++ + SA +F+ R KP++ Sbjct: 177 LGGE--ADVDAADVLDYLASDASTRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 230 Query: 243 VAGK 246 G+ Sbjct: 231 RVGR 234 >gi|281414576|ref|ZP_06246318.1| succinyl-CoA synthetase subunit alpha [Micrococcus luteus NCTC 2665] Length = 56 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 35/51 (68%) Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + + E+L Sbjct: 2 TAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAQLMREIL 52 >gi|257141033|ref|ZP_05589295.1| acetyltransferase [Burkholderia thailandensis E264] Length = 779 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 117 RVVGPGSLGVVSPALNAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D +T +I++ + SA +F+ R KP++ Sbjct: 177 LGGE--ADVDAADVLDYLASDASTRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 230 Query: 243 VAGK 246 G+ Sbjct: 231 RVGR 234 >gi|221210376|ref|ZP_03583356.1| acetyltransferase, gnat family [Burkholderia multivorans CGD1] gi|221169332|gb|EEE01799.1| acetyltransferase, gnat family [Burkholderia multivorans CGD1] Length = 784 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+L+P P R G V +S+S LT + + GLG S V Sbjct: 125 RIVGPGSLGVLSPARHAHFGAPAYTVRSGGVAWVSQSNALTNAVLGWANARGLGFSHVVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ E+ + A +F+ R KP++ Sbjct: 185 LGGE--ADVDAGDVLDYLASDPGTRAILL--EL--DSVRAARKFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAP 249 G+ P Sbjct: 239 RTGRADP 245 >gi|212710074|ref|ZP_03318202.1| hypothetical protein PROVALCAL_01127 [Providencia alcalifaciens DSM 30120] gi|212687281|gb|EEB46809.1| hypothetical protein PROVALCAL_01127 [Providencia alcalifaciens DSM 30120] Length = 516 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 15/214 (7%) Query: 51 GGNVNVPVFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 GG + + T+ AK AN ++I V A ++E ++ ++ ++ + + D Sbjct: 94 GGGQHEAKYATINSAKTHIPEANLAIISVNGQFAAREARIALENDLN-VMLFSDNVSIED 152 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 + +K ++GP+C + + + G+ R+GS+GI+ SGT + E + Sbjct: 153 ELALKQLASHKGLLMMGPDCGTAIINGTA---LCFGNNVRRGSIGIIGASGTGSQELSVR 209 Query: 170 TSQEGLGQSTAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + G G S +G GG + + G ID L++ AD+ T+ IV++ + A+ Sbjct: 210 IHEFGAGVSQLIGTGGRDLSEKIGGIMMIDALKMLDADDETQVIVLISKPPAPM---VAK 266 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAP---PGRTMGH 256 + ++A++ K +V F+ + P PG T Sbjct: 267 KVLEQAEKCHKPVVVCFLGSQPLPDDKPGLTFAQ 300 >gi|167579035|ref|ZP_02371909.1| acetyltransferase, GNAT family protein [Burkholderia thailandensis TXDOH] Length = 787 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 125 RVVGPGSLGVVSPALNAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D +T +I++ + SA +F+ R KP++ Sbjct: 185 LGGE--ADVDAADVLDYLASDASTRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 238 Query: 243 VAGK 246 G+ Sbjct: 239 RVGR 242 >gi|111020602|ref|YP_703574.1| succinate--CoA ligase (ADP-forming) [Rhodococcus jostii RHA1] gi|110820132|gb|ABG95416.1| probable succinate--CoA ligase (ADP-forming) [Rhodococcus jostii RHA1] Length = 690 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 105/251 (41%), Gaps = 24/251 (9%) Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----- 111 P +++E ER + VI VP G +A+ +++ A IV +T G L Sbjct: 61 PSLRSLSELDERV--DLVVITVPAQGFEEAVDDALAAGATAIVGVTAGFAELGAAGKAVQ 118 Query: 112 -RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 RV R+ + + L+GPNC G+L DS + + G V +LS+SG + E Sbjct: 119 DRVVERVRAAGAVLLGPNCLGVL--DSSTALTLASNALPAGRVALLSQSGNMALELSQFL 176 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 G G S +G G D++ + + T+ I + E G + F+ Sbjct: 177 EARGHGFSRFASLGNQADLGAA--DLIRSCVEHDDTDLIAVYCEDFG----DGRAFVDAA 230 Query: 231 AKRGRK-KPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAM-KEAGICIAPSPA 287 A+ R KP++ G +A R H G++ S I+A + AG+ SP Sbjct: 231 AQASRAGKPVLLLTVGGSAASIRGAQSHTGSLTSDSA-----VIDAACRAAGVYRVSSPR 285 Query: 288 RIGRSLVELLG 298 ++ LLG Sbjct: 286 QLADVAATLLG 296 >gi|283782387|ref|YP_003373142.1| CoA-binding domain-containing protein [Pirellula staleyi DSM 6068] gi|283440840|gb|ADB19282.1| CoA-binding domain protein [Pirellula staleyi DSM 6068] Length = 911 Score = 48.9 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 7/139 (5%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPNC G L PD + + G + LS+SG L + G+G S V Sbjct: 129 RVLGPNCLGFLVPDLKLSASFARGMPKPGRLAFLSQSGALCTAVLDWALDAGIGFSHFVS 188 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G G + D+L+ AD T+++++ E + A +F+ KPIV + Sbjct: 189 LGNMLDVGLD--DMLDYLAADPTTDAVILYVE----SISRAREFMSAARAFASHKPIVAY 242 Query: 243 VAGKTAPPGRTM-GHAGAV 260 AG+ + + H GA+ Sbjct: 243 KAGRFSDSAKAASSHTGAM 261 >gi|83716704|ref|YP_440394.1| acetyltransferase [Burkholderia thailandensis E264] gi|83650529|gb|ABC34593.1| acetyltransferase, GNAT family [Burkholderia thailandensis E264] Length = 836 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 174 RVVGPGSLGVVSPALNAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 233 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D +T +I++ + SA +F+ R KP++ Sbjct: 234 LGGE--ADVDAADVLDYLASDASTRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 287 Query: 243 VAGK 246 G+ Sbjct: 288 RVGR 291 >gi|298252223|ref|ZP_06976026.1| CoA-binding domain protein [Ktedonobacter racemifer DSM 44963] gi|297546815|gb|EFH80683.1| CoA-binding domain protein [Ktedonobacter racemifer DSM 44963] Length = 486 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 9/148 (6%) Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR--KGSVGILSRSGTLTYEAVFQTSQ 172 AR + R+IG NC G+ S K+ + G +F +G +G++S+SG L Q Sbjct: 122 ARCREHGIRIIGSNCMGLYVRRS-KLNAL-GMVFPLPEGPIGLVSQSGNLGMYFYAQAHL 179 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 +G G +T + +G F + ++ +LAD+ E+ V+ G + EE Q +D Sbjct: 180 DGCGFTTFLSVGNS--VDVSFPECMQ-YLADD-PETSVIAGYVESIEEETLRQVTRDMHA 235 Query: 233 RGRKKPIVGFVAGKTAPPGR-TMGHAGA 259 RG KP V ++G T R ++ H G+ Sbjct: 236 RGHYKPAVILLSGATEVGVRASLAHTGS 263 >gi|261344578|ref|ZP_05972222.1| putative oxidoreductase subunit [Providencia rustigianii DSM 4541] gi|282567492|gb|EFB73027.1| putative oxidoreductase subunit [Providencia rustigianii DSM 4541] Length = 516 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/214 (22%), Positives = 100/214 (46%), Gaps = 15/214 (7%) Query: 51 GGNVNVPVFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 GG+ + + T+ AK +N ++I V A ++E ++ ++ ++ + + D Sbjct: 94 GGSTHEAKYATLNSAKSHIPESNLAIISVNGQFAAREARIALENDLN-VMLFSDNVSIED 152 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 + +K + ++GP+C + + + G+ R+G++GI+ SGT + E + Sbjct: 153 ELALKQLASRKGLLMMGPDCGTAIINGT---ALCFGNDVRRGNIGIIGASGTGSQELSVR 209 Query: 170 TSQEGLGQSTAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + G G S +G GG + + G ID L++ AD+ T I ++ + + A+ Sbjct: 210 IHEFGAGVSQLIGTGGRDLSEKIGGIMMIDALKMLDADDETHVIALISKPPAPS---VAK 266 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAP---PGRTMGH 256 + ++AK+ K +V F+ + P PG T Sbjct: 267 KVLEQAKKCHKPVVVCFLGSQPLPDDEPGLTFAQ 300 >gi|15668770|ref|NP_247570.1| hypothetical protein MJ_0590 [Methanocaldococcus jannaschii DSM 2661] gi|2496062|sp|Q58010|Y590_METJA RecName: Full=Uncharacterized protein MJ0590 gi|1591298|gb|AAB98580.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 704 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 16/175 (9%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQT 170 ++K ++ + R+IGPNC GI+ + +F KG V I+S+SG + + Sbjct: 115 KIKEIAKRYNIRIIGPNCLGIMNT-HINLNATFAKVFPPKGGVSIISQSGAVLNAILDIA 173 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 +G S V IG + D+LE FL DE T+ +V+ I G ++ +FLK Sbjct: 174 PLLNIGFSKVVSIGNKA--DIQESDLLEYFLDDEDTKIVVLY--IEGLKDK---RFLKVA 226 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN--AMKEAGICIA 283 K +KKPI+ +G+T +G A G ED I A KEAGI A Sbjct: 227 KKLSKKKPIIALKSGRTE-----VGKKAAKSHTGSLAGEDVIYEAAFKEAGIIRA 276 >gi|83311656|ref|YP_421920.1| hypothetical protein amb2557 [Magnetospirillum magneticum AMB-1] gi|82946497|dbj|BAE51361.1| Hypothetical protein yfiQ [Magnetospirillum magneticum AMB-1] Length = 903 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 23/166 (13%) Query: 123 RLIGPNCPGILTP------DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 RL+GPN GIL P S ++PG + +S+SG L + +G Sbjct: 129 RLLGPNSMGILVPGIGLNASSSHENVLPGKL------AFVSQSGALCTAVLDWARAREIG 182 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S + +G +G +F DVL+ +D +T +I++ E + E F+ R Sbjct: 183 FSHFIHLGD--TEGVDFGDVLDYLGSDPSTRAILLYME----SIHERRNFMSAARAAARN 236 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGIC 281 KP++ AG++ R A A +G G++ + AM+ AG+ Sbjct: 237 KPVLAIKAGRS----REGARAAASHTGALAGSDLVFDAAMRRAGML 278 >gi|269125872|ref|YP_003299242.1| CoA-binding domain-containing protein [Thermomonospora curvata DSM 43183] gi|268310830|gb|ACY97204.1| CoA-binding domain protein [Thermomonospora curvata DSM 43183] Length = 821 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 20/155 (12%) Query: 116 RLEKSSS-RLIGPNCPGILTPD-SCKIG-----IMPGSIFRKGSVGILSRSGTLTYEAVF 168 RL +++ R++GPNC GI D + ++ MPG +G +G S+SG L + Sbjct: 308 RLARANGMRVVGPNCLGIANTDPAVRLNASLAPTMPG----RGPIGFFSQSGALGIAILQ 363 Query: 169 QTSQEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + ++ GLG ST V G V G D+L+ + D AT +++ E G+ +F Sbjct: 364 RAAERGLGLSTFVSAGNRADVSGN---DLLQYWEEDPATGVVLLYLESIGNPR----KFT 416 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 + + R KPIV G++ G +GHA ++ Sbjct: 417 RLARRISRAKPIVAVKTGRST-QGVPLGHAARALT 450 >gi|226362826|ref|YP_002780604.1| acyl-CoA synthetase [Rhodococcus opacus B4] gi|226241311|dbj|BAH51659.1| putative acyl-CoA synthetase [Rhodococcus opacus B4] Length = 690 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 106/251 (42%), Gaps = 24/251 (9%) Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----- 111 P +++E ER + VI VP G +A+ +++ A IV +T G L Sbjct: 61 PSLKSLSELDERV--DLVVITVPAQGFEEAVDDALAAGATAIVGVTAGFAELGAAGKAVQ 118 Query: 112 -RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 RV AR+ ++ + L+GPNC G+L DS + + G + +LS+SG + E Sbjct: 119 DRVVARVREAGAVLLGPNCLGVL--DSGTALTLASNPLPAGRIALLSQSGNMALELSQFL 176 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 G G S +G G D++ + + TE I + E G + F+ Sbjct: 177 EARGHGFSRFASLGNQADLGAA--DLIRSCVEHDDTELIAVYCEDFG----DGRAFVDAA 230 Query: 231 AKRGRK-KPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAM-KEAGICIAPSPA 287 A+ R KP++ G + R H G++ S I+A + AG+ SP Sbjct: 231 ARASRAGKPVLLLTVGGSEASIRGAQSHTGSLTSDSA-----VIDAACRAAGVYRVSSPR 285 Query: 288 RIGRSLVELLG 298 ++ LLG Sbjct: 286 QLADVAATLLG 296 >gi|84489718|ref|YP_447950.1| acyl-CoA synthetase [Methanosphaera stadtmanae DSM 3091] gi|84373037|gb|ABC57307.1| predicted acyl-CoA synthetase [Methanosphaera stadtmanae DSM 3091] Length = 700 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 20/232 (8%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPL 97 G I+P +T G + +P + TV+E + + +VI +P + E + I Sbjct: 40 GNIYPV--NTKTDGKLLGLPAYKTVSEIDDDNI-DLAVISIPARFINQTLEECGQKGIKN 96 Query: 98 IVCIT--------EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 I+ IT EG + D + A+ K + GPNC G L ++ + Sbjct: 97 IIVITAGFKEVGGEGAKLEDEMAEIAK--KYDMNIQGPNCLGSLDTNTPMNASFAQLSPK 154 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 KG++ +S+SG +T + + EG+G S V + G+ V +E ID++E D+ T+ I Sbjct: 155 KGNIAFVSQSGAMTVAILDWSVSEGIGFSKVVSL-GNKVDVSE-IDLIEYLATDDQTKVI 212 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAV 260 + E G ++ E +FL+ + + KP+V AG + + + H GA+ Sbjct: 213 LCYLE--GISDGE--RFLEVMRRVTKIKPVVILKAGSSQAGAKAVSSHTGAL 260 >gi|168056717|ref|XP_001780365.1| predicted protein [Physcomitrella patens subsp. patens] gi|162668207|gb|EDQ54819.1| predicted protein [Physcomitrella patens subsp. patens] Length = 53 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 23/51 (45%), Positives = 33/51 (64%) Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEI 215 EAVFQT+ G+ T VGI D + GT F+D L+ + D T+ +V++GEI Sbjct: 3 EAVFQTTARVPGKWTCVGIASDTINGTHFVDCLKKLVNDPKTKGLVLIGEI 53 >gi|269792026|ref|YP_003316930.1| FdrA family protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099661|gb|ACZ18648.1| FdrA family protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 517 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 13/181 (7%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +VI V AGD ++ I ++ +++ ++ +P+ + VK + ++GP+C Sbjct: 120 ANLAVISVAGRYAGDVAMDCIAKDLNVML-YSDNVPLEKEIEVKRAAAEKGLLVMGPDC- 177 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK- 189 G + IG+ + G V I++ +GT E Q ++ G+G +G GG VK Sbjct: 178 GTVVIRGVAIGM--ANSCPTGPVSIVAAAGTGLQEVHVQLARRGVGTLHGIGTGGRDVKS 235 Query: 190 --GTEFIDVL-ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV-GFVAG 245 G +++ L L D + +V+VG+ EE L RG KP+V GFV G Sbjct: 236 QVGGIMVEMASRLLLEDHEVQVLVIVGKPPAPEVEERILHL----ARGSSKPVVLGFVGG 291 Query: 246 K 246 K Sbjct: 292 K 292 >gi|158523073|ref|YP_001530943.1| CoA-binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158511899|gb|ABW68866.1| CoA-binding domain protein [Desulfococcus oleovorans Hxd3] Length = 711 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 21/223 (9%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCIT--------EGIPVLDMVRVKARLEKSS 121 A + ++I +PP AI + IE ++ +V ++ EG + + V R K+ Sbjct: 67 AVDLAMIILPPKATLAAIHDCIEKKVKGVVIVSAGFREVGGEGKQIEESVAALCR--KAG 124 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFR---KGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R++GPNC G++ P+S K+ + R +G++ +S+SG L + S G+G S Sbjct: 125 IRVVGPNCLGVINPNS-KVRLNASFSRRMPSQGNISFISQSGALCTAVLDFASDMGVGFS 183 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + G + +D+L D AT+ I+M E +E ++ P Sbjct: 184 KFISTGNK--ADVDELDLLTYLHKDPATDVIMMYIEELKRGGQEFVDAVRKITSCKNPTP 241 Query: 239 IVGFVAGKT-APPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 I+ +G+T A H G++ G G D I A E GI Sbjct: 242 ILAIKSGRTGAGAAAASSHTGSI--AGSEGVYDAIFA--ETGI 280 >gi|114055013|gb|ABI50081.1| ATP citrate lyase alpha subunit [Thermovibrio ammonificans] Length = 348 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 6/108 (5%) Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 + IGGD G++F+D L F + A + +VM+GE+GG E + L+ K KP++ Sbjct: 2 IAIGGDRFPGSDFLDHLLRFQKNPAVKYMVMLGEVGGELEYMVVEALE---KGLITKPLI 58 Query: 241 GFVAGKTAPP---GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + G A GHAGA + A+ K A++EAG + S Sbjct: 59 AWCIGTIAKHFGGEVQFGHAGAKAGADRETADAKNRALREAGALVPES 106 >gi|89898829|ref|YP_521300.1| GCN5-like protein N-acetyltransferase [Rhodoferax ferrireducens T118] gi|89343566|gb|ABD67769.1| GCN5-related N-acetyltransferase [Rhodoferax ferrireducens T118] Length = 890 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 6/126 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPNC G+L P + G V +S+SG L + G+G S V Sbjct: 122 RILGPNCIGLLAPHQGLNASFSHIDAQPGEVAFVSQSGALVTAMLDWAQGRGIGFSYFVS 181 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G +F D+L+ +D T +I++ E + E +F+ R KP++ Sbjct: 182 LGEH--ADVDFGDMLDYLASDAKTRAILLYAE----SIESPRKFMSAARAAARNKPVIVV 235 Query: 243 VAGKTA 248 AG++A Sbjct: 236 KAGRSA 241 >gi|271968313|ref|YP_003342509.1| acyl-CoA synthetase (NDP forming)-like protein [Streptosporangium roseum DSM 43021] gi|270511488|gb|ACZ89766.1| Acyl-CoA synthetase (NDP forming)-like protein [Streptosporangium roseum DSM 43021] Length = 881 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 11/142 (7%) Query: 123 RLIGPNCPGILTPD-SCKI-GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R++GPNC G+ D + ++ + +I +G VG S+SG L + + +Q G+G S+ Sbjct: 324 RVVGPNCLGVANTDPAVRLNATLAATIPGRGRVGFFSQSGALGTALLQRVAQRGMGISSF 383 Query: 181 VGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V G V G D+L+ + D T+ I++ E G+ +F + + R+KPI Sbjct: 384 VSAGNRADVSGN---DLLQYWEEDPQTDVILLYLESLGNPR----KFARLARRISRRKPI 436 Query: 240 VGFVAGKTAPPGRTMGHAGAVI 261 V +G T G GHA V+ Sbjct: 437 VVVKSGGTT-QGVPTGHAAPVL 457 >gi|239820173|ref|YP_002947358.1| CoA-binding domain protein [Variovorax paradoxus S110] gi|239805026|gb|ACS22092.1| CoA-binding domain protein [Variovorax paradoxus S110] Length = 710 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 21/189 (11%) Query: 38 GGIHP--KKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 GGI+P +KG + + + +VAE E +VI VPP+G DA+ + + + Sbjct: 46 GGIYPINRKGGLVQS-----LQAYASVAELPE--VPELAVIAVPPAGVLDAVQDCAQRGV 98 Query: 96 PLIVCITEGIPVL--DMVRVKARL----EKSSSRLIGPNCPGIL-TPDSCKIGI---MPG 145 V ++ G + + R++AR+ S R++GPNC G + PD + Sbjct: 99 KAAVILSAGFSEMGEEGSRLQARIGEVARASGMRIVGPNCLGAIGVPDKSIATFSVALES 158 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 S GSVGI+S+SG L + + GLG S + G + + D + AD Sbjct: 159 SFPAAGSVGIVSQSGNLGSFTLRMAGERGLGVSRMLTTGNE--CDVDIADAIASLAADPG 216 Query: 206 TESIVMVGE 214 T I+ E Sbjct: 217 TSVILCCME 225 >gi|189218038|ref|YP_001938680.1| acyl-CoA synthetase (ADP forming) alpha and beta chain [Methylacidiphilum infernorum V4] gi|189184896|gb|ACD82081.1| Acyl-CoA synthetase (ADP forming) alpha and beta chain [Methylacidiphilum infernorum V4] Length = 908 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 7/139 (5%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R+IGPNC G++ P + G + + G + LS+SG L + + + +G S V Sbjct: 136 RVIGPNCVGVILPHARFNGTFLAGLPKSGHIAFLSQSGALGAAVLDWSFSQNIGFSAFVS 195 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + ++ D+L D T I++ E G + + FL + +KPI+ Sbjct: 196 LGS--MADVDWGDILFFLAEDPLTRVILIYMESIG----DPSSFLSAARQVNFQKPILVL 249 Query: 243 VAGKTAPPGR-TMGHAGAV 260 AG++ R + H G++ Sbjct: 250 KAGRSKEGSRAALSHTGSL 268 >gi|319763273|ref|YP_004127210.1| gcn5-related n-acetyltransferase [Alicycliphilus denitrificans BC] gi|330825468|ref|YP_004388771.1| GCN5-like N-acetyltransferase [Alicycliphilus denitrificans K601] gi|317117834|gb|ADV00323.1| GCN5-related N-acetyltransferase [Alicycliphilus denitrificans BC] gi|329310840|gb|AEB85255.1| GCN5-related N-acetyltransferase [Alicycliphilus denitrificans K601] Length = 901 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 22/232 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 A+ ++I PP A+ + + ++ G+ +++ + L+GPN Sbjct: 68 ADLAIIAQPPQDLPAALDVAGRMNCKSALVLSSGVDAQLAEQLRKIARREGMHLLGPNSL 127 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G+ P G + R+GS+ ++ +SG LT + + +G S+ + +G P Sbjct: 128 GLQRPSLQLNASAAGPLAREGSLALVCQSGALTASILDWAANNAVGFSSVISLG--PHTD 185 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 + L+ D T+SIV+ E ++A +F+ KP+V AG+ P Sbjct: 186 VGLSEALDFLANDGRTQSIVVYME----GIQDARRFMSALRSAAYAKPVVVLKAGRK-PA 240 Query: 251 GRTMG--HAGAVISGGKGGAEDKINA-MKEAGICIAPSPARIGRSLVELLGS 299 G H+GA++ G++D +A ++ AG R+ RS VEL + Sbjct: 241 GNQAAQTHSGAIV-----GSDDVFDAVLRRAG------AVRV-RSFVELFSA 280 >gi|157382712|gb|ABV48794.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA25] Length = 348 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 8/109 (7%) Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPI 239 + IGGD G++F+D + + + + +V++GE+GG E A+ +KD GR KP+ Sbjct: 2 IAIGGDRFPGSDFLDHMLRYEKNPQVKMMVLLGEVGGELEYRVAEAIKD----GRITKPV 57 Query: 240 VGFVAGKTAPP---GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + + G + GHAGA + A+ K A++EAG + S Sbjct: 58 IAWCIGTISKHFGGEVQFGHAGAKAGAERETADAKNEALREAGAYVPKS 106 >gi|320100340|ref|YP_004175932.1| CoA-binding domain-containing protein [Desulfurococcus mucosus DSM 2162] gi|319752692|gb|ADV64450.1| CoA-binding domain protein [Desulfurococcus mucosus DSM 2162] Length = 466 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 11/167 (6%) Query: 119 KSSSRLIGPNCPGILTPDS-CKIGIMPGSIFR---KGSVGILSRSGTLTYEAVFQTSQEG 174 K R+IGPNC GI S +P + KG V +S+SG + + Sbjct: 122 KYGIRIIGPNCIGIYDSWSGVDTFFLPEEKMKRPPKGYVAFISQSGAFASALMDWMAYNN 181 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G S AV G + +D+LE +DE T I++ E G + FL+ K Sbjct: 182 IGVSRAVSYGNK--VDVDDVDILEYLASDEKTRVILIYLE--GLKDGRGRAFLEAARKVS 237 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 KP++ F AGKT GR A + + G +A K+AGI Sbjct: 238 TVKPVLIFKAGKT---GRGSLAAASHTAALAGDYSVYKSAFKQAGIV 281 >gi|206891146|ref|YP_002247894.1| acetyl-CoA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206743084|gb|ACI22141.1| acetyl-CoA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 898 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 25/169 (14%) Query: 119 KSSSRLIGPNCPGILTPDSCKIGI-MPGSIFR----KGSVGILSRSGTLTYEAVFQTSQE 173 K RL+GPN G + P GI + S+FR KG++ ++++S TL+ + + + + Sbjct: 125 KYGFRLLGPNSLGFIRP-----GINLNVSLFRRKLNKGNIALIAQSATLSVALLDRAADK 179 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G S V +G D +F D+++ F D +T +IV I + + +F+ Sbjct: 180 NIGFSYFVSLGSDI--DIDFADLIDFFGVDPSTRAIV----IYMQSIKNGRKFMTSARSF 233 Query: 234 GRKKPIVGFVAGKTAPPGRT-MGHAGAVISGGKGGAEDKI--NAMKEAG 279 KPIV +GK + H+G + EDK+ A K AG Sbjct: 234 AFSKPIVIVKSGKFVESLEVALTHSGLL------AGEDKVYDTAFKRAG 276 >gi|269119410|ref|YP_003307587.1| FdrA family protein [Sebaldella termitidis ATCC 33386] gi|268613288|gb|ACZ07656.1| FdrA family protein [Sebaldella termitidis ATCC 33386] Length = 573 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 17/166 (10%) Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 +PV T A ++ AN ++I +P A + +++E + + ++ + + D R+K Sbjct: 99 IPVARTWDSALRKLPDANLAIISIPGEYAAEETSKALEKGLN-VFLFSDNVSIEDEKRIK 157 Query: 115 ARLEKSSSRLIGPNC-PGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQT 170 ++GP+C GI IG +P ++ KG++GI+ SGT E Sbjct: 158 EEARTKGLLVMGPDCGTGI-------IGGLPLAFANVIEKGNIGIVGASGTGIQEISTII 210 Query: 171 SQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVMV 212 S++G G + A+G GG ++ I+ L+L ADE T+ IV + Sbjct: 211 SRKGYGITQAIGTGGRDLSAQIEAVTAIEALKLLAADEDTDVIVFI 256 >gi|11499106|ref|NP_070340.1| hypothetical protein AF1511 [Archaeoglobus fulgidus DSM 4304] gi|2649053|gb|AAB89736.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 881 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 12/170 (7%) Query: 119 KSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K RLIGPNC GI+ P++ + + +GS+ S+SG + + + + GLG Sbjct: 309 KYGMRLIGPNCMGIINTAPETRLLATFAPTPPNEGSIAFASQSGAVGLALMDRVNNYGLG 368 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S V +G + D++E + D T+ I++ E + +F + + +K Sbjct: 369 LSYFVSLGNSADITSN--DLIEFWEEDGRTKLIMLYQE----SIPNPRKFARLAKRISKK 422 Query: 237 KPIVGFVAGKTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGICIAPS 285 KPI+ +G T + + H GA++S G A D + K+ GI A S Sbjct: 423 KPILAIASGVTPAGAKAVASHTGAIVSSS-GIAIDAL--FKQTGIIRASS 469 >gi|270643365|ref|ZP_06222157.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae HK1212] gi|270317287|gb|EFA28849.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae HK1212] Length = 34 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 21/31 (67%), Positives = 26/31 (83%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY 31 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY 31 >gi|242280464|ref|YP_002992593.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242123358|gb|ACS81054.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 702 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 17/196 (8%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR-------- 123 + ++I +PP A AI + E + V + G + R RLE+ +R Sbjct: 72 DLALICLPPDEAIQAIDDLSEILVRAAVVTSGGFG--ETGREGYRLERELARTAKNHDMI 129 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPNC G++ + KG++ LS+SG + A+ + EG+G S + + Sbjct: 130 ILGPNCMGLMNTALGMNASLDPDFTLKGNIAFLSQSGAMCSTALDWANSEGVGFSKFISL 189 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G V G +L DE T+ IV E ++ FL+ KKP++ Sbjct: 190 GNKAVLGEA--TMLNYLANDEDTKVIVGYCETLKDGQD----FLRTAYDTTFKKPLILLR 243 Query: 244 AGKTAPPGRTM-GHAG 258 AG+T R HAG Sbjct: 244 AGETPSGARAASAHAG 259 >gi|170290751|ref|YP_001737567.1| Acyl-CoA synthetase (NDP forming) [Candidatus Korarchaeum cryptofilum OPF8] gi|170174831|gb|ACB07884.1| Acyl-CoA synthetase (NDP forming) [Candidatus Korarchaeum cryptofilum OPF8] Length = 482 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 109/248 (43%), Gaps = 34/248 (13%) Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCIT--------EGI 105 +NVP + +V + + ++I P A+ E I V I+ EG+ Sbjct: 57 LNVPTYKSVLDIPD--VPELAIIVTPAPNTPQALEECGRKGIRNAVVISGGFAEVGGEGV 114 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTP----DSCKIGI---MPGSIF------RKGS 152 + +M+ R + R+IGPNC G+++P D+ + I + G+ + + GS Sbjct: 115 KLQNMLDEIRR--RYGIRVIGPNCVGVISPSTGVDTLFLPIDKEIRGNSYISSPRPKPGS 172 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 V ++++SG + E +G S V G + +DV+E D T I++ Sbjct: 173 VALITQSGAFGVACLDYMYGEDIGLSKFVSYGNK--LDVDEVDVIEYLKDDPMTRVILVY 230 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 E + E+ +FL+ + R+KPIV AG+T+ R A I+G + Sbjct: 231 AE----SIEKGREFLELAREVTREKPIVVLKAGRTSAGARAASSHTAAIAGSDSIYD--- 283 Query: 273 NAMKEAGI 280 A ++AG+ Sbjct: 284 AAFRQAGV 291 >gi|258591244|emb|CBE67541.1| Acetyl-CoA synthetase / acetyltransferase (GNAT) family protein [NC10 bacterium 'Dutch sediment'] Length = 888 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 23/177 (12%) Query: 112 RVKARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 R++A ++ R+IGPNC G++ P ++ + + P + G + +S+SG L + Sbjct: 114 RIQATRKRYGMRIIGPNCLGVIRPMTGLNASFLNVRPEA----GRIAFISQSGALGSAIL 169 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 +G S +G + +F D+++ D T+SI++ E G+A+ +F+ Sbjct: 170 DWAMHAHIGFSLFASLGS--MMDVDFGDLIDFLGDDPNTKSIMLYMEGIGNAK----KFI 223 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKI--NAMKEAGIC 281 R KPI+ G+ A R H G++ G ED+ A K G+ Sbjct: 224 SAAKGFARNKPIIVLKPGRFAESARAAFSHTGSM------GGEDRTCDAAFKRVGVV 274 >gi|74205208|dbj|BAE23135.1| unnamed protein product [Mus musculus] Length = 436 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 8/119 (6%) Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G V IGGD G+ F+D + + + IV++GEIGG+ E + + +K+ GR Sbjct: 15 GVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGIKE----GR 70 Query: 236 -KKPIVGFVAGKTAPPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 KP+V + G A + GHAGA + A K A+KEAG+ + S +G Sbjct: 71 LTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELG 129 >gi|292491665|ref|YP_003527104.1| CoA-binding protein [Nitrosococcus halophilus Nc4] gi|291580260|gb|ADE14717.1| CoA-binding domain protein [Nitrosococcus halophilus Nc4] Length = 895 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 11/160 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPNC G++ P G + +G + +S+SG LT + + +G S + Sbjct: 129 RILGPNCVGLMIPLLGFNGSFAHTQAMEGEIAFVSQSGALTTVVLDWAKSKEIGFSYFIS 188 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G +F DVL+ + T +I++ E + +EA +F+ R KP++ Sbjct: 189 MGDS--ADIDFGDVLDYLGGEPNTHAILLYIE----SIKEARKFMSAARAAARNKPVLVV 242 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGIC 281 +G+ AP G A A +G GA+D + A++ AG+ Sbjct: 243 KSGR-APEG---AQAAASHTGALAGADDVYSAAIRRAGML 278 >gi|284988796|ref|YP_003407350.1| FdrA family protein [Geodermatophilus obscurus DSM 43160] gi|284062041|gb|ADB72979.1| FdrA family protein [Geodermatophilus obscurus DSM 43160] Length = 490 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILS 157 ++ ++G+PV V +K + ++G +C G +G ++ R+G VG+++ Sbjct: 146 VLVFSDGVPVEHEVALKRAAHDAGVLVMGSDC-GTAIVSGLALGF--ANVVRRGPVGLVA 202 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVG 213 SGT + G+G S +G+GG + V G +D L LF AD ATE +++V Sbjct: 203 ASGTGAQQVSCLLDTAGVGVSHVLGVGGRDLSEAVGGLATLDALALFDADPATERVLLVS 262 Query: 214 E 214 + Sbjct: 263 K 263 >gi|126466132|ref|YP_001041241.1| CoA-binding domain-containing protein [Staphylothermus marinus F1] gi|126014955|gb|ABN70333.1| CoA-binding domain protein [Staphylothermus marinus F1] Length = 461 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 8/130 (6%) Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIF---RKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R+IGPNC GI S +P +KG + +S+SG + + +G S Sbjct: 124 RIIGPNCLGIYDNWSGVDTFFLPDEKMMRPKKGYISFISQSGAFASALLDWMAYRNIGVS 183 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 A+ G + ID++E DE T+ I+M E G F+ K KKP Sbjct: 184 RAISYGNKI--DVDDIDLIEYLGEDEKTKLIIMYLE--GLKPGRGRLFIDKARKVVEKKP 239 Query: 239 IVGFVAGKTA 248 IV + AGKTA Sbjct: 240 IVIYKAGKTA 249 >gi|118575233|ref|YP_874976.1| acyl-CoA synthetase (NDP forming) [Cenarchaeum symbiosum A] gi|118193754|gb|ABK76672.1| acyl-CoA synthetase (NDP forming) [Cenarchaeum symbiosum A] Length = 701 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 19/152 (12%) Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK-----GSVGILSRSGTLTYEAVFQTSQE 173 K + +IGPNC G++ D M + F K G + ++S+SG + S + Sbjct: 120 KHNMGIIGPNCLGVMNLDP---KTMMNATFLKITPKTGHIALVSQSGAICAALCEDASAQ 176 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK--DEA 231 G+G S + + G+ TE I+VL++ E T IVM E G +E FL+ Sbjct: 177 GIGFSAIISM-GNKAAMTE-IEVLKMLADHEQTRVIVMYLEDMGDGQE----FLRVARHI 230 Query: 232 KRGRKKPIVGFVAGKTAPPG--RTMGHAGAVI 261 R KKPI+ +G++ P G M H GA++ Sbjct: 231 TRELKKPILVLKSGRS-PEGAKAAMSHTGALM 261 >gi|295695778|ref|YP_003589016.1| CoA-binding domain protein [Bacillus tusciae DSM 2912] gi|295411380|gb|ADG05872.1| CoA-binding domain protein [Bacillus tusciae DSM 2912] Length = 902 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 34/260 (13%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE----A 93 G ++P S G +VP + +V+ E+ + +VI VP DA+I ++E A Sbjct: 234 GPVYPVNPSARVVG---SVPAYPSVSALPEKV--DLAVIAVP----RDAVIPTVEECGRA 284 Query: 94 EIPLIVCITEGIPVL--DMVRVKARLEKSSS----RLIGPNCPGILTP-DSCKIGIMPGS 146 + +V IT G + ++A+L +++ R++GPNC G+L ++ Sbjct: 285 GVRAVVVITAGFAETGAEGRAMQAQLIETARGYGMRVVGPNCLGLLNAYPKIRLNASFSP 344 Query: 147 IFR-KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADE 204 IF G V + S+SG L + ++ GLG S V +G V G D+LE + D Sbjct: 345 IFPPYGPVSMSSQSGALGIAILQYAAEMGLGMSNFVSVGNKADVSGN---DLLEYWEEDP 401 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 T I++ E G+ +F + + GRKKP++ +G+T R G A ++ Sbjct: 402 NTGLILLYLESFGNPR----RFSRIARRVGRKKPVLVVKSGRTEVGHRAAGSHTAALAAN 457 Query: 265 KGGAEDKINAM-KEAGICIA 283 E ++A+ ++AG+ A Sbjct: 458 ----ETMVDALFEQAGVIRA 473 >gi|20094682|ref|NP_614529.1| Acyl-CoA synthetase (NDP forming) [Methanopyrus kandleri AV19] gi|19887846|gb|AAM02459.1| Acyl-CoA synthetase (NDP forming) [Methanopyrus kandleri AV19] Length = 446 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 24/220 (10%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL---DMVRVKA 115 + ++ E ER + +VI VP + + E+ EA +P V I+ G D+ R Sbjct: 54 YPSLLELPERV--DLAVIAVPARVVPEVVREAGEAGVPYCVVISAGFSEAGNEDLERELV 111 Query: 116 RL-EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK---GSVGILSRSGTLTYEAVFQTS 171 R K RL+GPNC GI+ + +IG+ G++ +++SG L + S Sbjct: 112 RTARKVGVRLVGPNCLGII---NARIGLNASFAAESPPPGNIAFVTQSGALATSVIDWFS 168 Query: 172 Q-----EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 G+G S V +G +F D LE D+ T+ +V+ E ++ +F Sbjct: 169 SGDVGTVGVGFSKFVSLGN--AADLDFPDFLEYLAEDDDTDVVVLYLE----GVKDGPRF 222 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMG-HAGAVISGGK 265 L ++ +KP++ G+T +G H G++ G+ Sbjct: 223 LDALSECAGRKPVIVLKGGRTEAGAEAVGTHTGSLAGSGE 262 >gi|152990670|ref|YP_001356392.1| hypothetical protein NIS_0924 [Nitratiruptor sp. SB155-2] gi|151422531|dbj|BAF70035.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 636 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 63/269 (23%), Positives = 104/269 (38%), Gaps = 64/269 (23%) Query: 41 HPKKGSTYWTGGNVNVPVF--------TTVAEAKERTAANASVIYVPP---SGAGDAIIE 89 H ++ Y N NV +F A AK +NA++ +V P + + Sbjct: 212 HKRRKRVYDLFENENVAIFGATDKPEKVGYAIAKNALKSNANIYFVNPRLNTLFDQKVYH 271 Query: 90 SIEAEIPLIVCITEGIP---VLDMV----------------------------RVKARLE 118 S+E E+P I IP VLD++ ++ + Sbjct: 272 SVE-ELPSIDTAVIAIPPGYVLDLLEQLGQKGVKNVVVISAGFKESGNEQAEEQMSETAQ 330 Query: 119 KSSSRLIGPNCPGI------LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K ++GPNC GI L K I+PG I G++S+SG + + + + Sbjct: 331 KYGMNIVGPNCLGIYNASKRLNLTFAKTDILPGDI------GLVSQSGAVLAALIDKATS 384 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 +G S + +G + +F D +E A E I + E ++ ++LK A Sbjct: 385 HSIGFSHIISLGN--MADFDFADAIEELNAKEECHFINIYAE----GLKDGKRYLK--AI 436 Query: 233 RGRKKPIVGFVAGKTAPPGR-TMGHAGAV 260 R KKPI + +GKT + H G + Sbjct: 437 RESKKPIFVYKSGKTKEAKKAAFSHTGNI 465 >gi|121594379|ref|YP_986275.1| GCN5-like N-acetyltransferase [Acidovorax sp. JS42] gi|120606459|gb|ABM42199.1| GCN5-related N-acetyltransferase [Acidovorax sp. JS42] Length = 908 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 22/235 (9%) Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGP 127 +T A+ ++I PP A+ + + ++ G+ +++ + L+GP Sbjct: 72 QTRADLAIIAQPPQDLPAALEVAGRINCRSALVLSNGVDAQLAEQLRKIARREGIHLLGP 131 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 N G+ P G + R+GS+ ++ +SG LT + S +G S+ + +G P Sbjct: 132 NSLGMQRPSLQLNASAAGPLAREGSLALVCQSGALTSSILDWASNNAVGFSSVISLG--P 189 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + L+ D T+SIV+ E + A +F+ KP+V AG+ Sbjct: 190 HTDVGLSEALDFLANDARTQSIVVYME----GIQNARRFMSALRSAAYAKPVVVLKAGRK 245 Query: 248 APPGRTMG--HAGAVISGGKGGAEDKIN-AMKEAGICIAPSPARIGRSLVELLGS 299 P G H+ A++ G++D + A++ AG R+ RS VEL + Sbjct: 246 -PAGNEAAQTHSAAIV-----GSDDVFDAALRRAG------AVRV-RSFVELFSA 287 >gi|78060987|ref|YP_370895.1| GCN5-related N-acetyltransferase [Burkholderia sp. 383] gi|77968872|gb|ABB10251.1| GCN5-related N-acetyltransferase [Burkholderia sp. 383] Length = 785 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+L+P P R G V +S+S LT + GLG S V Sbjct: 125 RIVGPGSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWADARGLGFSHVVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + +A +F+ R KP++ Sbjct: 185 LGGE--SDVDAGDVLDYLASDPGTRAILLELDTVRAAR----KFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAP 249 G+ P Sbjct: 239 RTGRADP 245 >gi|20091986|ref|NP_618061.1| acetate-CoA ligase (ADP-forming), subunit alpha [Methanosarcina acetivorans C2A] gi|19917192|gb|AAM06541.1| acetate-CoA ligase (ADP-forming), subunit alpha [Methanosarcina acetivorans C2A] Length = 468 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 11/153 (7%) Query: 113 VKARLEKSSSRLIGPNCPGIL-TPDSCKIGIMPGSIFRK---GSVGILSRSGTLTYEAVF 168 ++A L++ R +GPNC GI T + G + G + +L++SG+ + Sbjct: 128 LRALLKEKGIRAMGPNCLGIYDTISKVDTFFIEGEKIERPARGGISVLTQSGSFAAVIMD 187 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + + EG G + V G + V E D L+ DEAT+++ + E G + +FL+ Sbjct: 188 ELANEGAGVARVVSYG-NKVDLDE-SDCLDFLAQDEATKAVALYIESVG----DGRRFLE 241 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAV 260 + +KKP+V GK P R H GA+ Sbjct: 242 AASNCVKKKPVVALKVGKREPGARAASSHTGAI 274 >gi|222111025|ref|YP_002553289.1| gcn5-like n-acetyltransferase [Acidovorax ebreus TPSY] gi|221730469|gb|ACM33289.1| GCN5-related N-acetyltransferase [Acidovorax ebreus TPSY] Length = 901 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 22/235 (9%) Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGP 127 +T A+ ++I PP A+ + + ++ G+ +++ + L+GP Sbjct: 65 QTRADLAIIAQPPQDLPAALEVAGRINCRSALVLSNGVDAQLAEQLRKIARREGIHLLGP 124 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 N G+ P G + R+GS+ ++ +SG LT + S +G S+ + +G P Sbjct: 125 NSLGMQRPSLQLNASAAGPLAREGSLALVCQSGALTSSILDWASNNAVGFSSVISLG--P 182 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + L+ D T+SIV+ E + A +F+ KP+V AG+ Sbjct: 183 HTDVGLSEALDFLANDARTQSIVVYME----GIQNARRFMSALRSAAYAKPVVVLKAGRK 238 Query: 248 APPGRTMG--HAGAVISGGKGGAEDKIN-AMKEAGICIAPSPARIGRSLVELLGS 299 P G H+ A++ G++D + A++ AG R+ RS VEL + Sbjct: 239 -PAGNEAAQTHSAAIV-----GSDDVFDAALRRAG------AVRV-RSFVELFSA 280 >gi|292492067|ref|YP_003527506.1| CoA-binding protein [Nitrosococcus halophilus Nc4] gi|291580662|gb|ADE15119.1| CoA-binding domain protein [Nitrosococcus halophilus Nc4] Length = 890 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 27/170 (15%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRK-----GSVGILSRSGTLTYEAVFQTSQEGLGQ 177 RL+GPNC GI+ P +G+ + F K G + ++S+SG L + + +G Sbjct: 128 RLLGPNCLGIMRP---PLGL--NATFNKGMALPGKLALVSQSGALCTAILDWATYNKIGF 182 Query: 178 STAV--GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 S+ + GI D +F ++L+ + D TESI++ E A F+ R Sbjct: 183 SSVISTGISAD----LDFGEILDYLVLDHHTESILLYIE----GIHHARGFMSALRAAAR 234 Query: 236 KKPIVGFVAGKTAPPGRTMG-HAGAVISGGKGGAEDKIN-AMKEAGICIA 283 KP++ G+ A + H GA++ GA+D + A++ AG+ A Sbjct: 235 VKPVIAVKVGRHAGGSQAAASHTGALV-----GADDVFDAALRRAGVVRA 279 >gi|147669618|ref|YP_001214436.1| CoA-binding domain-containing protein [Dehalococcoides sp. BAV1] gi|146270566|gb|ABQ17558.1| CoA-binding domain protein [Dehalococcoides sp. BAV1] Length = 375 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 7/119 (5%) Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPNC G ++P S + + G+V LS+SG L + +G S Sbjct: 126 RIIGPNCMGTMSPASGFNATFARMEMPKTGNVAFLSQSGALGSAVLDWAIARNVGFSGFA 185 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 IG + F D+++ F DE T+SI++ E G EA +F+ R KPI+ Sbjct: 186 SIGS--MMDVNFGDLIDYFGTDENTKSIIVYLETMG----EAKKFMSAARGFARTKPII 238 >gi|257094819|ref|YP_003168460.1| CoA-binding domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047343|gb|ACV36531.1| CoA-binding domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 896 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 6/126 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RL+GPNC GI+ P+ G + ++S+SG + + + +G S+ + Sbjct: 129 RLLGPNCLGIIRPNLGLNATFARVHANIGHLALVSQSGAICSAVLDWATSNRIGFSSVIS 188 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG +F ++L+ + D T I++ E +A +F+ R KPIV Sbjct: 189 LGG--TADVDFGEILDYLIYDNLTHYILLYVE----GIRDARRFMSALRSAARIKPIVLL 242 Query: 243 VAGKTA 248 AG+ A Sbjct: 243 KAGRHA 248 >gi|229819078|ref|YP_002880604.1| FdrA family protein [Beutenbergia cavernae DSM 12333] gi|229564991|gb|ACQ78842.1| FdrA family protein [Beutenbergia cavernae DSM 12333] Length = 562 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 14/149 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +++ +P A I ++ ++ + V ++ + V D VR+K + + ++GP+C Sbjct: 115 ANLALVSIPGEQAAPEIDRLLDKDLHVFV-FSDNLAVDDEVRLKHKARERGLLMMGPDC- 172 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG-- 185 + +G +P +I GS+GI+ SGT T E + Q + G G S A+G+GG Sbjct: 173 -----GTGSLGGLPLAFTNIVTPGSIGIVGASGTGTQEVMVQIDRAGGGVSQAIGLGGRD 227 Query: 186 --DPVKGTEFIDVLELFLADEATESIVMV 212 + V + L AD T I +V Sbjct: 228 LSEKVGAVTCLQALRALDADPGTSVITLV 256 >gi|254167988|ref|ZP_04874836.1| CoA binding domain protein [Aciduliprofundum boonei T469] gi|289595996|ref|YP_003482692.1| CoA-binding domain protein [Aciduliprofundum boonei T469] gi|197623031|gb|EDY35598.1| CoA binding domain protein [Aciduliprofundum boonei T469] gi|289533783|gb|ADD08130.1| CoA-binding domain protein [Aciduliprofundum boonei T469] Length = 464 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 15/171 (8%) Query: 118 EKSSSRLIGPNCPGILTPDS---CKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQTSQE 173 +K ++R+IGPN GI P + + + S F G + +++SG L + S Sbjct: 118 KKYNARIIGPNTVGIYIPSTGVNTALVVPERSRFPGDGDIAFITQSGALGLLTMDSVSMY 177 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G S+ + +G + V E ++L+ F DE ++ I+M E + E F++ Sbjct: 178 DVGFSSFINLG-NRVDVNEN-ELLQYFGEDEKSKVIIMYIESFANGRE----FMRVAKNV 231 Query: 234 GRKKPIVGFVAGKTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGICIA 283 RKKPIV AG+T G+ H GA+ GG D A K+ G+ A Sbjct: 232 SRKKPIVVLKAGRTKRGGKAASLHTGAL--GGSDAVAD--GAFKQCGVIRA 278 >gi|158426281|ref|YP_001527573.1| GCN5-related N-acetyltransferase [Azorhizobium caulinodans ORS 571] gi|158333170|dbj|BAF90655.1| GCN5-related N-acetyltransferase [Azorhizobium caulinodans ORS 571] Length = 898 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 21/165 (12%) Query: 123 RLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RL+GP+C G ++ ++ +MP RKG V LS+S L + G+G S Sbjct: 125 RLLGPSCLGFISTGPRINASYAHLMP----RKGDVAFLSQSAALATAVLDWAEGRGVGFS 180 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +G +F D+L+ D AT +IV+ E + +A +F+ R KP Sbjct: 181 HVASLGDK--ADIDFGDLLDHLAMDSATRAIVLYVE----SITDARKFMSAGRIAARAKP 234 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN--AMKEAGIC 281 ++ AG++A G AV G+ D + A + AG+ Sbjct: 235 VIVIKAGRSA-----AGAQAAVSHTGRLAGADAVYDAAFRRAGML 274 >gi|171915331|ref|ZP_02930801.1| acetyl-CoA synthetase [Verrucomicrobium spinosum DSM 4136] Length = 916 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 6/135 (4%) Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 V A + R++GPNC G++ P + + R GSV LS+SG L + + + Sbjct: 135 VMAEARRGRMRILGPNCLGLMMPHAGLNASFSATSARPGSVAFLSQSGALCTAVLDWSLR 194 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 E +G S V +G + + DV+ F + T SIV E G +A +FL + Sbjct: 195 EKVGFSGFVSLGS--LLDVGWGDVISYFGDEPHTRSIVCYMESAG----DARRFLSAARE 248 Query: 233 RGRKKPIVGFVAGKT 247 K I+ G+T Sbjct: 249 VALTKTIIVLKVGRT 263 >gi|91787102|ref|YP_548054.1| CoA-binding [Polaromonas sp. JS666] gi|91696327|gb|ABE43156.1| CoA-binding protein [Polaromonas sp. JS666] Length = 903 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%) Query: 123 RLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R++GPNC G L P PG+ + G + +++SG L + + G+G S + Sbjct: 137 RILGPNCIGALVPGVGLNASFAPGNA-QPGRLAFVTQSGALATAMLDWANSRGVGFSHFI 195 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G +F DV++ +D T +I+M E + + A +F+ R KP++ Sbjct: 196 SLGDS--ADVDFGDVIDYLASDGGTRAILMYAE----SIKAARKFMSAARAASRNKPVIV 249 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGI 280 AG+ AP G A A +G G++ + A++ AG+ Sbjct: 250 VKAGR-APDG---ARAAASHTGALAGSDAVFDAAIRRAGM 285 >gi|315230865|ref|YP_004071301.1| acetyl-CoA synthetase subunit alpha [Thermococcus barophilus MP] gi|315183893|gb|ADT84078.1| acetyl-CoA synthetase (ADP-forming) alpha chain [Thermococcus barophilus MP] Length = 462 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 13/168 (7%) Query: 118 EKSSSRLIGPNCPGIL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K R++GPN G++ TP P + GS+ ++S+SG L + T E +G Sbjct: 124 HKYGMRILGPNIFGVVYTPAKLNATFGPTDVM-PGSLALISQSGALGIALMGWTILEKVG 182 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S V IG + D+LE F DE T++I++ E ++ +F+K + K Sbjct: 183 LSAVVSIGNK--SDIDDADLLEYFKDDENTKAILIYME----GVKDGRKFMKAAKEVSMK 236 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGICIA 283 KPI+ AG++ + A A +G GA+ A K++G+ A Sbjct: 237 KPIIVIKAGRSERGAK----AAASHTGSLAGADSIYTAAFKQSGVLRA 280 >gi|206564548|ref|YP_002235311.1| putative acetyl-CoA synthetase [Burkholderia cenocepacia J2315] gi|198040588|emb|CAR56574.1| putative acetyl-CoA synthetase [Burkholderia cenocepacia J2315] Length = 785 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+L+P P R G V +S+S LT + GLG S V Sbjct: 125 RIVGPGSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWAHARGLGFSHVVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + +A +F+ R KP++ Sbjct: 185 LGGE--SDVDAGDVLDYLASDPGTRAILLELDTVRAAR----KFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAP 249 G+ P Sbjct: 239 RTGRADP 245 >gi|87118828|ref|ZP_01074727.1| predicted Acetyl-CoA synthetase [Marinomonas sp. MED121] gi|86166462|gb|EAQ67728.1| predicted Acetyl-CoA synthetase [Marinomonas sp. MED121] Length = 727 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 17/171 (9%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG-LGQSTAV 181 R+IGPN G+ K+ ++ + G VGI+S+SG + + G +G ST V Sbjct: 142 RIIGPNTSGLFNLHK-KVNLLALDNVKPGDVGIISQSGNMLLSLALEAQSNGHIGFSTYV 200 Query: 182 GIGGDPVKGTEFIDVLELFLADEAT--ESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 G G G F D L D+ T + + G G A FL + K +KKP+ Sbjct: 201 GPGNQTDVG--FADYLAYLGDDQNTGVATFYVEGFKDGRA------FLDEARKTSQKKPV 252 Query: 240 VGFVAGKT-APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 V + +G T A H GA+ G + ++ +++AG+ + + I Sbjct: 253 VVYKSGSTEAGQKAASSHTGAL----AGSYQMTVDLLEQAGVSVVANSDEI 299 >gi|158520155|ref|YP_001528025.1| CoA-binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158508981|gb|ABW65948.1| CoA-binding domain protein [Desulfococcus oleovorans Hxd3] Length = 492 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 9/139 (6%) Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRK-GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPNC G+ T ++ P + K G +G++S+SG+ + Q LG STA Sbjct: 133 IIGPNCLGV-TNAHARLNTTPHRYYGKPGFIGLVSQSGSFVTQMFAYLDQLHLGFSTAFS 191 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG- 241 IG + T+ +D LE A T+ I + E A +F++ K KPIV Sbjct: 192 IGNE--VNTDLVDCLEFLGACPDTKVIALYVE----AIRRGRKFVETARKIVPHKPIVAL 245 Query: 242 FVAGKTAPPGRTMGHAGAV 260 +V G + H G++ Sbjct: 246 YVGGSETGRKAALSHTGSM 264 >gi|124809263|ref|XP_001348531.1| succinyl CoA ligase, putative [Plasmodium falciparum 3D7] gi|23497427|gb|AAN36970.1| succinyl CoA ligase, putative [Plasmodium falciparum 3D7] Length = 973 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 11/161 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R+IGPNC GI+ S KG +LS+SG + A+ + Q +G S + Sbjct: 160 RIIGPNCLGIIHSYHNMNASFASSDILKGHFSLLSQSGAICSAALDLSLQHNIGFSHFIS 219 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + +F +++E D T+ I++ E G + +F+ K KPI+ Sbjct: 220 VGS--MCDVQFYELVEYLFYDVNTKYILLYVESIG----DMNRFVAVCKKVCLYKPIILL 273 Query: 243 VAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +GKTA + H G+++ G E MK+ G+ + Sbjct: 274 KSGKTAKAAEAAISHTGSMV----GNYEIFYATMKKLGVLV 310 >gi|240102344|ref|YP_002958652.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA) [Thermococcus gammatolerans EJ3] gi|239909897|gb|ACS32788.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA) [Thermococcus gammatolerans EJ3] Length = 537 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 23/207 (11%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERT--AANASVIYVPPSGAGDAIIESIEAEIPL 97 ++PK GS G V E +ER + ++I +P +I+ I I Sbjct: 43 VNPKGGSVEVAG---------RVFEIRERLDEPVDTAIIAIPAKFV-PGLIDEIGPRIKG 92 Query: 98 IVCITEGIPVL---DMVR-VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSV 153 V I+ G + D+ R + + K RLIGPNC GI G + + G + Sbjct: 93 AVVISAGFSEVGNADLERELVEKARKHGVRLIGPNCAGIFGVHGKFFGSFEVRV-KPGGL 151 Query: 154 GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVG 213 ++S+SG A+ ++EG+G S V G D LE F DE T++I + Sbjct: 152 ALISQSGAFGGAALAMGNEEGIGFSAFVSYGNAADLNES--DFLEYFADDENTKAIALYI 209 Query: 214 EIGGSAEEEAAQFLKDEAKRGRKKPIV 240 E ++ FLK + ++KP++ Sbjct: 210 E----GVKDGRHFLKALSYASKRKPVI 232 >gi|300697554|ref|YP_003748215.1| fused acyl-CoA synthetase: NAD(P)-binding subunit; ATP-binding subunit [Ralstonia solanacearum CFBP2957] gi|299074278|emb|CBJ53823.1| fused acyl-CoA synthetase: NAD(P)-binding subunit; ATP-binding subunit [Ralstonia solanacearum CFBP2957] Length = 903 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 11/159 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPNC G++ P ++ G + S+SG LT + + +G S + Sbjct: 129 RILGPNCVGLIVPGIGLNASFASTMALPGKLAFASQSGALTTAVLDWSRSRQIGFSYFIS 188 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + DVL+ D AT +I++ E A +F+ R KP++ Sbjct: 189 LGDS--TDVDLADVLDYLAGDPATHAILLYVE----AVRSGRKFMSAARAAARNKPVLIV 242 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGI 280 AG+ P G A A +G GA+D + A++ AG+ Sbjct: 243 KAGRV-PEG---AKAAASHTGALAGADDVYDAAIRRAGM 277 >gi|225405597|ref|ZP_03760786.1| hypothetical protein CLOSTASPAR_04818 [Clostridium asparagiforme DSM 15981] gi|225042861|gb|EEG53107.1| hypothetical protein CLOSTASPAR_04818 [Clostridium asparagiforme DSM 15981] Length = 517 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 55/232 (23%), Positives = 106/232 (45%), Gaps = 20/232 (8%) Query: 26 EQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVP-PSGAG 84 E+AI + + G+ KG G V + A+ +++ +P P Sbjct: 78 EKAIAAVEDMIFNGLEDDKG------GKVTYSAKSIAGALAMEPEADLAILSIPGPLVKK 131 Query: 85 DAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP 144 DA+ + +++ + L++ ++ +P+ D + +K + ++ ++GP+C + + + Sbjct: 132 DAM-KLLDSGVNLLI-FSDNVPIEDELELKRKADEMGLMVMGPDCGTAIVRGAS---LAF 186 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELF 200 + R+G +G++ SGT E G G S A+G G + VK G L+ Sbjct: 187 ANKVRQGKIGMVCASGTGLQEVAVLIHNLGQGISHALGTGSNDVKDAIGGISMKRGLKWL 246 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 D +TE IV+V + ++ + LK+E K+ RK IV F+ G + P R Sbjct: 247 EQDGSTELIVVVSK---PPQKATMENLKEEFKKCRKPVIVNFL-GSSQPVKR 294 >gi|73748855|ref|YP_308094.1| acetyl-CoA synthetase [Dehalococcoides sp. CBDB1] gi|73660571|emb|CAI83178.1| acetyl-CoA synthetase [Dehalococcoides sp. CBDB1] Length = 891 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 8/141 (5%) Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPNC G ++P S + + G+V LS+SG L + +G S Sbjct: 126 RIIGPNCMGTMSPASGFNATFARMEMPKTGNVAFLSQSGALGSAVLDWAIARNVGFSGFA 185 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 IG + F D+++ F DE T+SI++ E G EA +F+ R KPI+ Sbjct: 186 SIGS--MMDVNFGDLIDYFGTDENTKSIIVYLETMG----EAKKFMSAARGFARTKPIIV 239 Query: 242 FVAGKTAPPGRTM-GHAGAVI 261 G+ + H G+++ Sbjct: 240 IKPGRFEESAQAAKSHTGSMV 260 >gi|224367793|ref|YP_002601956.1| SucD1 [Desulfobacterium autotrophicum HRM2] gi|223690509|gb|ACN13792.1| SucD1 [Desulfobacterium autotrophicum HRM2] Length = 716 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 25/217 (11%) Query: 74 SVIYVPPSGAGDAIIESIEAEIPLIVCIT--------EGIPVLDMVRVKARLEKSSSRLI 125 ++I +PP A ++ ++IE + IV ++ EG + D ++ A + + RL+ Sbjct: 71 AIIILPPKLALTSVAQAIEKGVKGIVIVSAGFREVGGEGAEMED--KLIAMCKAAGVRLV 128 Query: 126 GPNCPGILTPDSCKIGIMPGSIF-----RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 GPNC G++ P + G+ + F + G + +S+SG L + + G S Sbjct: 129 GPNCLGVINPLA---GVRMNASFSARMPQAGHISFISQSGALCTAVLDFAANRDFGFSKF 185 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 + IG + +D+L D T+ I++ E G E Q +K+ R PI+ Sbjct: 186 ISIGNKA--DVDELDLLRYLHEDMDTDVIMIYQEALGRG-PEFIQAVKEITSGSRPTPIL 242 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKE 277 +G+T+ + A A +G G+E +A+ E Sbjct: 243 AIKSGRTSAGAK----AAASHTGSLAGSEAVYDAIFE 275 >gi|84626399|gb|ABC59739.1| succinate-CoA ligase, GDP-forming, alpha subunit [Spermophilus parryii] Length = 50 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/50 (64%), Positives = 43/50 (86%) Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 P+V F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA Sbjct: 1 PVVSFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPA 50 >gi|300855543|ref|YP_003780527.1| putative FdrA [Clostridium ljungdahlii DSM 13528] gi|300435658|gb|ADK15425.1| predicted FdrA [Clostridium ljungdahlii DSM 13528] Length = 524 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 13/191 (6%) Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 T A K AN ++I +P A D ++++ + +++ ++ + V D + +K Sbjct: 107 TFNAALKHMKDANMAIISLPGKYAADEARKALKNGLNVML-FSDNVTVEDEIELKKMGRS 165 Query: 120 SSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 ++GP+C I+ + + ++ RKG +GI+ SGT T E + G G S Sbjct: 166 KGLLVMGPDCGTAIIN----HVPLCFANVVRKGDIGIVGASGTGTQEVTVLIDKLGAGIS 221 Query: 179 TAVGIGGDPVK----GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 A+G GG +K G I+ + + D T+ IV+V + E A+ + D Sbjct: 222 QAIGTGGRDLKSSVGGIMMIEGFKALIEDPDTKVIVLVSK---PPAPEVAKNILDMVAST 278 Query: 235 RKKPIVGFVAG 245 K +V F+ G Sbjct: 279 NKPIVVDFIGG 289 >gi|159041659|ref|YP_001540911.1| CoA-binding domain-containing protein [Caldivirga maquilingensis IC-167] gi|157920494|gb|ABW01921.1| CoA-binding domain protein [Caldivirga maquilingensis IC-167] Length = 477 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 56/241 (23%), Positives = 105/241 (43%), Gaps = 26/241 (10%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCIT--------EGIPVLDM 110 + ++ E + + +VI VP E+++ + ++ I+ EG + D Sbjct: 68 YKSITEVNDEV--DLAVIAVPAPVVPQVTAEAVKKNVKALIIISGGFSEVGDEGRRLEDE 125 Query: 111 VRVKARLEKSSSRLIGPNCPGILTPDS-CKIGIMPGSIF---RKGSVGILSRSGTLTYEA 166 VR ++ + R++GPNC G+ D+ +P KG + ++S+SG + Sbjct: 126 VR--EIVKNTQVRVLGPNCIGVYNADNGLDTFFLPEDRMGRPPKGPIALISQSGAVAAAI 183 Query: 167 VFQTSQEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + S+ LG AV G V +E ++ +LA+ + ++ + G E + Sbjct: 184 LDWASRRRLGIGLAVNYGNKLDVNESELLE----YLANNSNVKVITIYMEGLKYPGEGLR 239 Query: 226 FLKDEAKRGRKKPIVGFVAGKT-APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 FL+ K + KP++ + AG+T A G H A+ G E A ++AG+ A Sbjct: 240 FLETAKKVTQIKPVIVYKAGRTKASAGAVASHTAAL----AGDYEIYRGAFRQAGLIEAN 295 Query: 285 S 285 S Sbjct: 296 S 296 >gi|256396545|ref|YP_003118109.1| CoA-binding domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256362771|gb|ACU76268.1| CoA-binding domain protein [Catenulispora acidiphila DSM 44928] Length = 707 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 10/146 (6%) Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIP---VLDMVRVKA---RLEKSSSRLIGPN 128 V+ VP + + + E++ IV +T G + R +A R+ + + L+GPN Sbjct: 73 VVSVPAAVYEETVEEALACGASAIVAVTAGFAETGADGLARQRAVAERVRAAGAVLVGPN 132 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 C GI D+ + F G V +LS+SG L E + GLG S V +G Sbjct: 133 CLGI--ADNTTELYLASDAFDLGGVALLSQSGNLALELQLSFAPHGLGFSRFVSLGNQ-- 188 Query: 189 KGTEFIDVLELFLADEATESIVMVGE 214 +D++E EAT++I + E Sbjct: 189 SDVTLVDLVEDCARHEATQAIAVYAE 214 >gi|159905087|ref|YP_001548749.1| CoA-binding domain-containing protein [Methanococcus maripaludis C6] gi|159886580|gb|ABX01517.1| CoA-binding domain protein [Methanococcus maripaludis C6] Length = 702 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 16/193 (8%) Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIP-----VLDMVRVKARLEKSSSRLIGPNC 129 +I +P A DA+ E + + IT G VL+ R+KA +E+ R IGPNC Sbjct: 73 IISIPAEYAVDAMEECGRKGVKAAIIITAGFAETNNHVLED-RLKAIIEQYGIRTIGPNC 131 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD-PV 188 G++ + G++ +S+SG + + + LG S V +G V Sbjct: 132 LGVINLHNHLNASFSKEFSNMGNIAFISQSGAIMTALLDIANYYNLGFSKIVSMGNKIDV 191 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 + E ++ LE D T+ + + I G +E +F+ K RKKP++ +GK+ Sbjct: 192 QEYELLNYLE---NDPHTKVVALY--IEGLKDE---KFISAAKKISRKKPVIVLKSGKSE 243 Query: 249 PPGRTM-GHAGAV 260 + H G++ Sbjct: 244 EGAKAASSHTGSL 256 >gi|167646420|ref|YP_001684083.1| CoA-binding domain-containing protein [Caulobacter sp. K31] gi|167348850|gb|ABZ71585.1| CoA-binding domain protein [Caulobacter sp. K31] Length = 893 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 20/181 (11%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPN G+L P + G + ++S+SG L + + LG S V Sbjct: 124 RIVGPNGLGLLAPHARLNASFARGAPTPGGLALISQSGALVSGLIDWANTRQLGFSGIVS 183 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + D+++LF AD T++I++ E AA+F+ R KP++ Sbjct: 184 VGD--MAEVDLGDLIDLFAADPHTDAILLYVE----GVTNAAKFMSAARAAVRIKPVIAL 237 Query: 243 VAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGIC---------IAPSPARIGRS 292 AG+ G+ + H GA+ G + A + AGI A + R+GR+ Sbjct: 238 KAGRNPASGKAVRSHTGAL----AGAYDVHACAFERAGIVQVETLTDLFDAAAVLRVGRT 293 Query: 293 L 293 L Sbjct: 294 L 294 >gi|23013940|ref|ZP_00053786.1| COG1042: Acyl-CoA synthetase (NDP forming) [Magnetospirillum magnetotacticum MS-1] Length = 903 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 23/166 (13%) Query: 123 RLIGPNCPGILTP------DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 RL+GPN GIL P S ++PG + +S+SG L + +G Sbjct: 129 RLLGPNSMGILVPGIGLNASSSHENVLPGKL------AFVSQSGALCTAVLDWARAREIG 182 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S + +G +G +F DVL+ +D +T +I++ E + E F+ R Sbjct: 183 FSHFIHLGD--TEGVDFGDVLDYLGSDPSTRAILLYME----SIHERRNFMSAARAAARN 236 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGIC 281 KP++ +G++ R A A +G G++ + AM+ AG+ Sbjct: 237 KPVLAIKSGRSKEGAR----AAASHTGALAGSDLVFDAAMRRAGML 278 >gi|224012040|ref|XP_002294673.1| acetyl-coa synthetase [Thalassiosira pseudonana CCMP1335] gi|220969693|gb|EED88033.1| acetyl-coa synthetase [Thalassiosira pseudonana CCMP1335] Length = 973 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 16/179 (8%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPNC G++ P I + G+V +S+SG + + + Q +G S+ V Sbjct: 171 RVVGPNCLGVMNPIVGLNATFATQIAKPGNVAFISQSGAMCTSILDWSLQANVGFSSFVS 230 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IG + + D++ D T++I + E G +A F+ ++ KPI+ Sbjct: 231 IGS--MLDVSWGDIIYYLGDDPNTKAIAIYMETIG----DARSFMSAASEVAMTKPII-- 282 Query: 243 VAGKTAPPGRTMGHAGAVIS--GGKGGAEDKIN-AMKEAGICIAPSPARIGRSLVELLG 298 PGRT A A S G G++D ++ A K G+ + + R +VELLG Sbjct: 283 ----VIKPGRTEQAAAAAASHTGSLAGSDDVLDAAFKRCGV-LRVNKIREVFEIVELLG 336 >gi|226314097|ref|YP_002773993.1| hypothetical protein BBR47_45120 [Brevibacillus brevis NBRC 100599] gi|226097047|dbj|BAH45489.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 514 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 94/190 (49%), Gaps = 11/190 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +VI V + A +++E ++ +++ ++ + + + + +K + ++GP+C Sbjct: 115 ANLAVISVNGAFAAREARKALENDLHVML-FSDNVSIEEEIALKQFAHEKGLLMMGPDCG 173 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG----D 186 + + + + G+ RKG++GI+ SGT + E + G G + +G GG + Sbjct: 174 TAIIGN---VALCFGNAVRKGNIGIVGASGTGSQEVSVRIHDFGGGITQLIGTGGRDLSE 230 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 V G +D ++ DEAT+ IV++ + ++ +E + + K +K +V F+ G+ Sbjct: 231 QVGGIMMLDGIKALEEDEATKVIVLISKPPAASVQEK---VLAQVKSCKKPVVVYFIGGE 287 Query: 247 TAPPGRTMGH 256 P GH Sbjct: 288 ETPVLEAGGH 297 >gi|224367560|ref|YP_002601723.1| SucC2 [Desulfobacterium autotrophicum HRM2] gi|223690276|gb|ACN13559.1| SucC2 [Desulfobacterium autotrophicum HRM2] Length = 709 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 19/150 (12%) Query: 118 EKSSSRLIGPNCPGILTPDSCK--IGIMPGSIFRKGSVGILSRSG----TLTYEAVFQTS 171 ++S R+IGPN G++ S +GI +G + ++ +SG TL EA+ + Sbjct: 119 KESGVRIIGPNTSGMINMKSNMNLVGIKNAP---RGGIALICQSGNMALTLITEAMIRKH 175 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + G + +G+G + +F + LE D T+SI+M E + +FL+ Sbjct: 176 E---GFTYYIGVGNEA--DIKFHEYLEFLRNDPETKSILMYVE----GMSQGRKFLQQAY 226 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMG-HAGAV 260 + +KKPIV +G++A R+ G H G++ Sbjct: 227 ETTKKKPIVLLKSGRSATGKRSAGSHTGSL 256 >gi|297562237|ref|YP_003681211.1| CoA-binding protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846685|gb|ADH68705.1| CoA-binding domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 976 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 36/237 (15%) Query: 51 GGNVNVPVFTTVAEAKERTAANA--SVIYVPPSGAGDAIIESIEAEIPLIV---CITEGI 105 GG PV+ EAK A SV+ +P D + ++ A++ + V C +G+ Sbjct: 292 GGEFQGPVYPVHPEAKAVVGVRAYPSVLDIPDQV--DLAVVAVRADMVVDVVEQCADKGV 349 Query: 106 PVLDMVRV---------KARLEK-------SSSRLIGPNCPGILTPD---SCKIGIMPGS 146 L +V +AR ++ + R++GPNC GI D S + P Sbjct: 350 HGLVVVSSGFGETGPEGRARQDELVRTARAAGMRVVGPNCLGIANTDPEISLNATLSP-D 408 Query: 147 IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP-VKGTEFIDVLELFLADEA 205 + G++G S+SG L + + ++ G+G ST V G V G D+++ + D A Sbjct: 409 LPPSGTIGFFSQSGALGRAILQRVAERGMGLSTFVSAGNRADVSGN---DLMQYWQEDPA 465 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 TE ++ E G+ +F + + ++KP+V +G +A T GHA +S Sbjct: 466 TEVVLQYLESLGNPR----KFTRLARRLAKQKPVVAVRSGGSARTTPT-GHAAGGLS 517 >gi|289193036|ref|YP_003458977.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanocaldococcus sp. FS406-22] gi|288939486|gb|ADC70241.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanocaldococcus sp. FS406-22] Length = 699 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 77/164 (46%), Gaps = 16/164 (9%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPNC GI+ + +F KG V I+S+SG + + +G S V Sbjct: 121 RVIGPNCLGIMNT-HINLNATFAKVFPPKGGVSIISQSGAVLNAILDIAPLLNIGFSKVV 179 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 IG + D+LE FL DE T+ +V+ I G ++ +FLK K +KKPI+ Sbjct: 180 SIGNKA--DIQESDLLEYFLDDEDTKIVVLY--IEGLKDK---RFLKVAKKLSKKKPIIA 232 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN--AMKEAGICIA 283 +G+T +G A G ED I A KEAGI A Sbjct: 233 LKSGRT-----EVGKKAAKSHTGSLAGEDVIYEAAFKEAGIIRA 271 >gi|218884241|ref|YP_002428623.1| AcdA-1 acetate--coA ligase (ADP-forming), alpha chain [Desulfurococcus kamchatkensis 1221n] gi|218765857|gb|ACL11256.1| AcdA-1 acetate--coA ligase (ADP-forming), alpha chain [Desulfurococcus kamchatkensis 1221n] Length = 481 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 8/134 (5%) Query: 119 KSSSRLIGPNCPGILTPDS-CKIGIMPGSIFR---KGSVGILSRSGTLTYEAVFQTSQEG 174 K R+IGPNC GI S +P + KG V +S+SG + + Sbjct: 137 KYGIRIIGPNCIGIFDNWSGVDTFFLPEEKMKRPPKGYVAFISQSGAFASALMDWMAYNN 196 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G S A+ G + ID+LE D+ T I++ E G F++ + Sbjct: 197 IGVSRAISYGNK--IDVDDIDLLEYLAGDDKTRVILVYLE--GLKNARGRIFIETARRVS 252 Query: 235 RKKPIVGFVAGKTA 248 R KP++ F AGKT+ Sbjct: 253 RVKPVLVFKAGKTS 266 >gi|302878607|ref|YP_003847171.1| CoA-binding domain-containing protein [Gallionella capsiferriformans ES-2] gi|302581396|gb|ADL55407.1| CoA-binding domain protein [Gallionella capsiferriformans ES-2] Length = 892 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 33/221 (14%) Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCIT--------EGIPVLDMVRVKARLEKSSSRLIG 126 VI PP D I E + + V IT EG + V V A + RLIG Sbjct: 74 VIATPPKTVPDIIEECGKHGVKAAVIITAGFGEIGAEGQELERQVLVNA--ARYGIRLIG 131 Query: 127 PNCPGILTPDSCKIGIMPGSIFRK-----GSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 PNC G++ P IG+ + F G++ ++S+SG L + +G S+ V Sbjct: 132 PNCLGVMRP---SIGL--NATFNNGGANAGNLALVSQSGALCTAILDWAQINDVGFSSVV 186 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G +F + L+ ++D T+SI++ E E+ +F+ R KP++ Sbjct: 187 SMGSS--ADVDFGETLDYLVSDSNTQSILLYIE----GIRESRRFMSSLRAAARVKPVIL 240 Query: 242 FVAGKTAPPGR-TMGHAGAVISGGKGGAEDKIN-AMKEAGI 280 G+ + M H +++ G++D + A++ AG+ Sbjct: 241 IKVGRHEAGSKAAMSHTASLV-----GSDDAFDAAVRRAGV 276 >gi|218886868|ref|YP_002436189.1| GCN5-related N-acetyltransferase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757822|gb|ACL08721.1| GCN5-related N-acetyltransferase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 898 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 12/128 (9%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRK---GSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R++GPNC G +TP +G+ R+ G V LS+S +L + + +G+G S Sbjct: 130 RVLGPNCLGFITP---SVGVNASLAPREALPGKVAFLSQSDSLFTSVLDWATSKGIGFSH 186 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + +G F DVL+ D T ++++ E SA +F+ R KP+ Sbjct: 187 FIALGDR--YDVHFNDVLDYLNGDVNTRAVLLYIETIDSAR----RFMSAARALARNKPV 240 Query: 240 VGFVAGKT 247 + AG++ Sbjct: 241 LVIKAGRS 248 >gi|90417805|ref|ZP_01225717.1| acetyltransferase, GNAT family [Aurantimonas manganoxydans SI85-9A1] gi|90337477|gb|EAS51128.1| acetyltransferase, GNAT family [Aurantimonas manganoxydans SI85-9A1] Length = 897 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 14/122 (11%) Query: 123 RLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R++GPNC G+++P ++ +MP R G + ++S+SG + + + +G S Sbjct: 127 RIVGPNCLGLISPAAGINASFAHLMP----RAGDIALVSQSGAMLTSVIDWADERRIGFS 182 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + +G + +F D+L+ D T SI++ E EA +FL R P Sbjct: 183 HLLSVGD--MSDVDFGDMLDYLATDRTTRSILLYVE----NVTEAQKFLSAARLAARSMP 236 Query: 239 IV 240 ++ Sbjct: 237 VL 238 >gi|254193892|ref|ZP_04900324.1| acetyltransferase, GNAT family [Burkholderia pseudomallei S13] gi|169650643|gb|EDS83336.1| acetyltransferase, GNAT family [Burkholderia pseudomallei S13] Length = 941 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 279 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 338 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 339 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 392 Query: 243 VAGK 246 AG+ Sbjct: 393 RAGR 396 >gi|76817819|ref|YP_336394.1| acetyltransferase [Burkholderia pseudomallei 1710b] gi|76582292|gb|ABA51766.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 1710b] Length = 1024 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 362 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 421 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + SA +F+ R KP++ Sbjct: 422 LGGE--ADVDAADVLDYLASDAETRAILLELDTVKSAR----KFMSAARAAARNKPVLAL 475 Query: 243 VAGK 246 AG+ Sbjct: 476 RAGR 479 >gi|218297026|ref|ZP_03497703.1| GCN5-related N-acetyltransferase [Thermus aquaticus Y51MC23] gi|218242581|gb|EED09118.1| GCN5-related N-acetyltransferase [Thermus aquaticus Y51MC23] Length = 742 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 19/208 (9%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPG 131 + +VI VP G+A+ S + ++ +T G + + + + S RL+GP G Sbjct: 268 DLAVIAVPKERVGEALEASGRRGVRGVIVLTTGFTPEEAKALADKARRLSMRLLGPGSLG 327 Query: 132 IL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 + T G++P + R G + I S+SGTL + GLG S+ V +G Sbjct: 328 LTHTASRLAAGLVP--LPRGGPLAISSQSGTLGRAVIAYAEGMGLGVSSFVSLGAKADIS 385 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 + D+L+ + DEAT+ I++ E G+ +F + + G++KPI+ V P Sbjct: 386 SN--DLLQFWEEDEATQVILLYLESFGNPR----RFSRLARRIGKRKPILA-VHPSRDPL 438 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEA 278 RT+ V+ + N+++EA Sbjct: 439 VRTLFAQAGVV---------RANSLEEA 457 >gi|288917602|ref|ZP_06411966.1| CoA-binding domain protein [Frankia sp. EUN1f] gi|288350995|gb|EFC85208.1| CoA-binding domain protein [Frankia sp. EUN1f] Length = 962 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 22/187 (11%) Query: 74 SVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGP 127 +VI +P + DA+ ++ ++ ++ G + V +S RLIGP Sbjct: 297 AVIALPAAQVADAVRACAHKDVRNLIVVSAGFAEAGADGRARLAEVTRLARESGMRLIGP 356 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGS-----VGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 N G++ D + + F GS VG ++SG L + +T++ +G ST V Sbjct: 357 NAMGVINTDP---AVRLHATFAAGSPPTGRVGAFTQSGALAGTFLAETARRSIGLSTFVS 413 Query: 183 IGG-DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G V G D+L+ + +DE TE +++ + G+ +F + + GR+KP++ Sbjct: 414 TGDRSDVSGN---DLLQFWQSDERTEVVMLHLQSFGNPR----KFARIARRLGRRKPVIA 466 Query: 242 FVAGKTA 248 +G ++ Sbjct: 467 LKSGGSS 473 >gi|300787341|ref|YP_003767632.1| acyl-CoA synthetase [Amycolatopsis mediterranei U32] gi|299796855|gb|ADJ47230.1| acyl-CoA synthetase [Amycolatopsis mediterranei U32] Length = 875 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 6/110 (5%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPD-SCKIGI-MPGSIFRKGSVGILSRSGTLTYEAVFQ 169 RV A + RL+GPNC G+++ D +C + GS R G++G++++SG + Sbjct: 294 RVHAAAREYGLRLVGPNCLGVISTDPACPYDLTFLGSRVRPGNIGVVTQSGGVGIALAES 353 Query: 170 TSQEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGS 218 GLG ST V G V G D+L + AD TE V+ E G+ Sbjct: 354 LGDLGLGMSTLVSTGDKYDVSGN---DLLMWWAADRRTELAVLYLESFGN 400 >gi|296139547|ref|YP_003646790.1| CoA-binding protein [Tsukamurella paurometabola DSM 20162] gi|296027681|gb|ADG78451.1| CoA-binding domain protein [Tsukamurella paurometabola DSM 20162] Length = 903 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 50/219 (22%), Positives = 95/219 (43%), Gaps = 32/219 (14%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 +HP++ S + + +V + +R + +V+ VP G + + + E+ ++ Sbjct: 263 VHPERRSV------AGIRAYESVRDIPDRV--DLAVVAVPADNMGQVLDDCLAKEVRTLL 314 Query: 100 CITEGIPVL------DMVRVKARLEKSSSRLIGPNCPGILTPD------SCKIGIMPGSI 147 ++ G R+ + RLIGPN G++ D + ++PG Sbjct: 315 VVSSGFSDAGGRGKESERRLLKAVRSHGMRLIGPNALGVVNTDREVRLNATLAPVVPG-- 372 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADEAT 206 +G+VG +SG L + ++ G+G +T V G V G DVL+ + D+ T Sbjct: 373 --RGNVGFFCQSGALGIAILDTAAKRGVGLTTFVSAGNRADVSGN---DVLQYWDTDDDT 427 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 E +++ E G+ +F + + R+KPIV G Sbjct: 428 EVVLLYLESFGNPR----KFGRIARRLARQKPIVAVHRG 462 >gi|154150457|ref|YP_001404075.1| CoA-binding domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153999009|gb|ABS55432.1| CoA-binding domain protein [Methanoregula boonei 6A8] Length = 687 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 17/162 (10%) Query: 123 RLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R+IGPNC G++ P D+ + P + G++ LS+SG + V + + +G S Sbjct: 353 RIIGPNCLGLIVPPRGIDTTYVHQSP----KPGNIAFLSQSGAIINTVVDWSLAQNIGFS 408 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + +G +FID L D T++I+M E + F++ ++ + KP Sbjct: 409 NVISVGNQ--CDLDFIDYLRYVEKDPKTKAIIMYIE----QINDGKTFMEVVSEVAQSKP 462 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 ++ +G + R A + G E + A +++G+ Sbjct: 463 VIAIKSGSSR---RGSAAASSHTGSLSGSYEVYMEAFRKSGV 501 >gi|119719515|ref|YP_920010.1| CoA-binding domain-containing protein [Thermofilum pendens Hrk 5] gi|119524635|gb|ABL78007.1| CoA-binding domain protein [Thermofilum pendens Hrk 5] Length = 704 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 28/208 (13%) Query: 98 IVCITEGIPVLDMVRVKARL----EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSV 153 + IT G + V ++ R+ + RL+GPN GI + + G + Sbjct: 98 VAVITSGFKEIGNVDLEQRIASIAKNYGMRLLGPNIVGICDTVKRVNASFCQGLPKPGEI 157 Query: 154 GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVG 213 +++SG L V T +G+G S V IG + D++E F D+ T+ I Sbjct: 158 AFITQSGALGIALVGWTKLKGIGLSDLVSIGNKA--DVDETDLVEFFGEDQYTKVITAYL 215 Query: 214 EIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG----HAGAVISGGKGGAE 269 E + +FL+ + R+KPI+ AG+ RT+G H G+ ++G E Sbjct: 216 E----GVSDGRRFLEAARRVARRKPIIVLKAGRGV---RTIGAIKSHTGS-LAGSFAAYE 267 Query: 270 DKINAMKEAGICIAPSPARIGRSLVELL 297 A K++GI +A RS VEL Sbjct: 268 ---AAFKQSGILLA-------RSFVELF 285 >gi|119717172|ref|YP_924137.1| CoA-binding domain-containing protein [Nocardioides sp. JS614] gi|119537833|gb|ABL82450.1| CoA-binding domain protein [Nocardioides sp. JS614] Length = 899 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 27/215 (12%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL-DMVRVK 114 +P + TV + + + +++ VP D +++ + +V I+ G + RV+ Sbjct: 248 LPTYKTVGDIPDDV--DVAIVAVPAEAVQDVVLDCAAKGVHGLVVISSGFAETGEEGRVR 305 Query: 115 AR----LEKSSS-RLIGPNCPGILTP------DSCKIGIMPGSIFRKGSVGILSRSGTLT 163 R L +S RLIGPN GI+ ++ +MP +G G +SG L Sbjct: 306 QRKLVGLSRSYGLRLIGPNALGIINTAAEVSLNASLSPLMPP----RGRAGFFCQSGALG 361 Query: 164 YEAVFQTSQEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 + + GLG ST V G V G D+L+ + D++TE +++ E G+ Sbjct: 362 TAILEKVYNRGLGLSTFVSAGNRADVSGN---DLLQYWEEDDSTEVVLLYLESIGNPR-- 416 Query: 223 AAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 +F + + +KPI+ +G+T G MGHA Sbjct: 417 --KFSRIARRVSLRKPIIAVRSGRTT-QGVPMGHA 448 >gi|218783011|ref|YP_002434329.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764395|gb|ACL06861.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 725 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 11/146 (7%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV-FQTSQEGLGQSTAV 181 R+IGPNC G P+ + S + G + ++S+SG E + T + G+G + V Sbjct: 377 RVIGPNCMGFYVPNRRMLTWQKASK-KSGPIALISQSGGNAQEITHYATGRYGIGFNKVV 435 Query: 182 GIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 G V+ +F+D L D+ TE I M E + +FLK + +KKPI+ Sbjct: 436 SYGNALTVESADFLDYLA---GDDETEIITMYLE----GLKNGRRFLKLAEETNKKKPIL 488 Query: 241 GFVAGKTAPPGRTM-GHAGAVISGGK 265 + G + + + H GA+ G K Sbjct: 489 IYKGGLSETGAQAVSSHTGALAGGPK 514 >gi|183600601|ref|ZP_02962094.1| hypothetical protein PROSTU_04187 [Providencia stuartii ATCC 25827] gi|188019878|gb|EDU57918.1| hypothetical protein PROSTU_04187 [Providencia stuartii ATCC 25827] Length = 516 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 46/207 (22%), Positives = 97/207 (46%), Gaps = 12/207 (5%) Query: 51 GGNVNVPVFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 GG+ + + T+ A +N +VI V A ++E ++ ++ ++ + + D Sbjct: 94 GGSQHEAKYATLHSAHSHIPESNLAVISVNGQFAAREARIALENDLN-VMLFSDNVSIDD 152 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 + +K + ++GP+C + + + G+ R+G++GI+ SGT + E + Sbjct: 153 ELALKQLASRKGLLMMGPDCGTAIINGA---ALCFGNNVRRGNIGIVGASGTGSQELSVR 209 Query: 170 TSQEGLGQSTAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + G G S +G GG + + G ID L++ ADE T IV++ + + A+ Sbjct: 210 IHEFGAGVSQLIGTGGRDLSEKIGGIMMIDALKMLDADEETHVIVLISKPPAAT---VAK 266 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGR 252 + +A++ K +V F+ + P + Sbjct: 267 KVLAQAEKCHKPVVVCFLGNQPIPDDK 293 >gi|284042768|ref|YP_003393108.1| CoA-binding protein [Conexibacter woesei DSM 14684] gi|283946989|gb|ADB49733.1| CoA-binding domain protein [Conexibacter woesei DSM 14684] Length = 904 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 12/122 (9%) Query: 123 RLIGPNCPGILTPD---SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RL+GPNC G+L D P S G +G+LS+SG + + Q G+G ST Sbjct: 323 RLVGPNCLGVLNTDPRVRLDATFAP-SHPPAGGIGLLSQSGGVGIALLEQARALGIGVST 381 Query: 180 AVGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V +G + G +F++ E DE T +I++ E G+ +F + + G++KP Sbjct: 382 FVSVGNKADLSGNDFLEWSE---QDERTRAILLYLESFGNPR----KFARIARRVGQRKP 434 Query: 239 IV 240 IV Sbjct: 435 IV 436 >gi|163855521|ref|YP_001629819.1| putative acetyl-CoA synthetase [Bordetella petrii DSM 12804] gi|163259249|emb|CAP41549.1| putative acetyl-CoA synthetase [Bordetella petrii] Length = 722 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 39/234 (16%) Query: 1 MSILVDKNTKVLVQGLTGKAGTF--HTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPV 58 M L+D ++ V V G + G+F HT + I + ++PK S VP Sbjct: 20 MRRLIDPSS-VAVVGASDTPGSFGRHTLENIRVGYQGRLYAVNPKYRSV------AGVPC 72 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV----------L 108 + ++ + E + ++ VP DA++ +E +C G+ V + Sbjct: 73 YASLEDLPE--VPDCVIVAVP----NDAVLPLVEQAA---MCGVGGVIVFSSGFAEVGDI 123 Query: 109 DMVRVKARLE----KSSSRLIGPNCPGILTPDS-CKIGIMPG---SIFRKGSVGILSRSG 160 + VR++ R+ ++ R+IGPNC GI+ +S + MP + +G +G++S+SG Sbjct: 124 EKVRIQHRMATIAAETGMRIIGPNCVGIVNSNSMAALTFMPKFNEMCWARGDIGLISQSG 183 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 L Y V Q + +G S + G + D++ + DE+T+ I + E Sbjct: 184 ALGY-CVLQGMERWIGFSHYLSPGNS--CDVDVCDMINYLVDDESTKVIACMFE 234 >gi|83590948|ref|YP_430957.1| FdrA [Moorella thermoacetica ATCC 39073] gi|83573862|gb|ABC20414.1| FdrA [Moorella thermoacetica ATCC 39073] Length = 520 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 11/179 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I VP + A ++++ + + ++ + + D VR+K K ++GP+C Sbjct: 116 ANLALISVPGTYAAAEALKALNLGLN-VHLFSDNVTLEDEVRLKQIGTKKGLLVMGPDC- 173 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG----D 186 G D + ++ +G +GI+ SGT EA + G G S A+G GG D Sbjct: 174 GTAIIDGVPLAF--ANVVARGKIGIVGASGTGIQEATVLIERLGGGISHAIGTGGRDLLD 231 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 V G + ++L D ATE I+++ + G A + D K+ +K +V + G Sbjct: 232 EVGGQMMLLGIDLLEDDPATEVILLISKPAGP---RTANKILDRVKQCKKPVVVNLLKG 287 >gi|152981509|ref|YP_001352806.1| oxidoreductase [Janthinobacterium sp. Marseille] gi|151281586|gb|ABR89996.1| oxidoreductase [Janthinobacterium sp. Marseille] Length = 516 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 46/195 (23%), Positives = 93/195 (47%), Gaps = 12/195 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A A+E +N +V+ V + A ++E + ++ ++ + V D + +K Sbjct: 102 YATLASARENVPGSNLAVVSVNGAYAVREARAALEQGLN-VMLFSDNVSVEDELALKQLA 160 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 ++GP+C + + + G+ R+G++GI+ SGT + E + G G Sbjct: 161 HSKGLLMMGPDCGTAIINNK---ALCFGNHVRQGNIGIIGASGTGSQELSVRIHDFGGGV 217 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + AD+ T+ IV++ + ++ E+ + E R Sbjct: 218 SQLIGTGGRDLHEKIGGIMMLDAMRMLDADDQTKVIVLISKPPAASVEKK---VLAEISR 274 Query: 234 GRKKPIVGFVAGKTA 248 K +V F+ GK A Sbjct: 275 CSKPVVVCFIGGKEA 289 >gi|82523920|emb|CAI78642.1| Acyl-CoA synthetase (NDP forming) [uncultured delta proteobacterium] Length = 464 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 14/150 (9%) Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S RLIGPNC G+ P S + P G VG++S SG+L Q G+ S Sbjct: 130 SGMRLIGPNCMGVYAPRS-GLSFFPQLEREAGPVGLVSHSGSLANIICRIAPQRGIRFSK 188 Query: 180 AVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE-EAAQFLKDEAKRGR-K 236 A+ +G + + +F+ L+LA + S+ IG E + QF D + K Sbjct: 189 AISLGNECDLTSADFL----LYLAKDEETSV-----IGAYIEGIKNGQFFFDALREASLK 239 Query: 237 KPIVGFVAGKTAPPGRTMG-HAGAVISGGK 265 KP++ + G T+ + H GA+ S K Sbjct: 240 KPVILWKVGLTSAGAQAAASHTGALASARK 269 >gi|300919167|ref|ZP_07135698.1| membrane protein FdrA [Escherichia coli MS 115-1] gi|300413728|gb|EFJ97038.1| membrane protein FdrA [Escherichia coli MS 115-1] Length = 555 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGIL---TPDSCKIGIMPGSIFRKGSVG 154 ++ ++ + + D +++K R + ++GP+C + TP + +MP +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFA-NVMP-----EGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q +Q G G + A+G+GG V G + LE+ ADE +E + Sbjct: 198 VIGASGTGIQELCSQIAQAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|209879069|ref|XP_002140975.1| acetyl-CoA synthetase [Cryptosporidium muris RN66] gi|209556581|gb|EEA06626.1| acetyl-CoA synthetase, putative [Cryptosporidium muris RN66] Length = 966 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 21/217 (9%) Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV-----LDMVRVKARLE---KSSSRLIG 126 VI P + E+ + ++P I+ I+ G +D R KA L+ K+ R++G Sbjct: 98 VIVTPAKTVLGIVQEAAKKKVPAILIISSGFKESGPEGID--REKAILDIAKKNGIRILG 155 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNC G + + +G+ LS+SG L + + +G S V +G Sbjct: 156 PNCLGFMNVAYNLNATFINCMACRGTTAFLSQSGALCAAVLDWAVKVRIGFSAFVSVGS- 214 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + ++ D+++ D T+ I+M E G+A +FL + KPI+ AGK Sbjct: 215 -MSDIDWGDLVDYLGHDPNTKIILMYIESIGNAR----KFLSAAKEIAISKPIIVIKAGK 269 Query: 247 T-APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 + A H G+++ G + I+AMK G+ + Sbjct: 270 SRAAYKAAASHTGSLV----GNYDAFISAMKRIGVLV 302 >gi|284991969|ref|YP_003410523.1| CoA-binding domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284065214|gb|ADB76152.1| CoA-binding domain protein [Geodermatophilus obscurus DSM 43160] Length = 902 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 12/131 (9%) Query: 120 SSSRLIGPNCPGILTPDSC---KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S R++GPNC GI+ D + P + +G VG ++SG L + Q LG Sbjct: 325 SGMRVVGPNCLGIVNTDPAVRLNASLAP-RVPGRGRVGFFAQSGALGSALLEQARTRNLG 383 Query: 177 QSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 ST V G V G D+L+ + D TE +++ E G+ +F + + GR Sbjct: 384 LSTFVSAGNRADVSGN---DLLQYWATDPGTEVVLLHLESFGNPR----KFARLARQVGR 436 Query: 236 KKPIVGFVAGK 246 KP+V +G+ Sbjct: 437 TKPVVAVKSGR 447 >gi|156932875|ref|YP_001436791.1| hypothetical protein ESA_00676 [Cronobacter sakazakii ATCC BAA-894] gi|156531129|gb|ABU75955.1| hypothetical protein ESA_00676 [Cronobacter sakazakii ATCC BAA-894] Length = 887 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 9/138 (6%) Query: 123 RLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 RL+GPN G+L P P I RKG + +S+S ++ + Q LG S + Sbjct: 121 RLLGPNSLGLLAPWQGLNASFSPVPI-RKGKLAFISQSAAVSNTILDWAQQRQLGFSWFI 179 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G P + ++L+ D T +I++ E +A +F+ R KPI+ Sbjct: 180 ALGDSP--DIDVDELLDYLARDSKTSAILLYLE----HLSDARRFVSAARSASRNKPILV 233 Query: 242 FVAGKTAPPGRTMG-HAG 258 +G++ R + HAG Sbjct: 234 IKSGRSPSARRLLNTHAG 251 >gi|198243025|ref|YP_002214484.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197937541|gb|ACH74874.1| protein FdrA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326622232|gb|EGE28577.1| protein FdrA [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 554 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/188 (22%), Positives = 87/188 (46%), Gaps = 16/188 (8%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +++ V A + ++++ + +++ ++ + + D +R+K R ++GP+C Sbjct: 118 ANLALVSVAGEYAAELADQALDRSLNVMI-FSDNVTLDDEIRLKRRARDKGLLVMGPDCG 176 Query: 131 GILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP- 187 + ++ +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TAMIANTPLAFANVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDL 231 Query: 188 ---VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 V G + LE+ ADE ++ + V + A + A + KP+V Sbjct: 232 SAEVGGISALTALEILSADEKSQVLAFVSKPPADAVRQHII----AAMKATGKPVVALFL 287 Query: 245 GKTAPPGR 252 G ++P R Sbjct: 288 GFSSPVAR 295 >gi|188494889|ref|ZP_03002159.1| bacterial FdrA protein [Escherichia coli 53638] gi|188490088|gb|EDU65191.1| bacterial FdrA protein [Escherichia coli 53638] Length = 555 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGIL---TPDSCKIGIMPGSIFRKGSVG 154 ++ ++ + + D +++K R + ++GP+C + TP + +MP +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFA-NVMP-----EGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q +Q G G + A+G+GG V G + LE+ ADE +E + Sbjct: 198 VIGASGTGIQELCSQIAQAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|72161706|ref|YP_289363.1| 6-carboxyhexanoate--COA ligase [Thermobifida fusca YX] gi|71915438|gb|AAZ55340.1| probable 6-carboxyhexanoate--COA ligase [Thermobifida fusca YX] Length = 692 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 17/200 (8%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL------DMVRVKARLEKSSSRLI 125 +A+ + VP A+ + +E I + + G L R+ R + R++ Sbjct: 70 DAAYLLVPARAVESALEDCLERGIRTVTICSAGYAELGAEGAERQRRLVERARERGVRIL 129 Query: 126 GPNCPGILTPDSCKIGIMPGSI---FRKGSVGILSRSGTLTYEAVFQTSQ-EGLGQSTAV 181 GPNC G+L P +G +I + GS+ +LS+SG + A+F +Q +G T V Sbjct: 130 GPNCIGVLNPVDTYVGCPTFNITYSYTPGSIALLSQSGGMA-AALFNRAQGRTIGIRTMV 188 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G + + ++L+ F+AD T I + E + E R KPIV Sbjct: 189 SLGNE--ADIQMGELLDAFVADPQTRVIAIYIE---QLRDAERFAAAAERARAAGKPIVL 243 Query: 242 FVAGKTAPPGRT-MGHAGAV 260 G + RT +GH GA+ Sbjct: 244 LKVGGSEAGRRTVLGHTGAM 263 >gi|311277405|ref|YP_003939636.1| FdrA family protein [Enterobacter cloacae SCF1] gi|308746600|gb|ADO46352.1| FdrA family protein [Enterobacter cloacae SCF1] Length = 516 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 53/239 (22%), Positives = 112/239 (46%), Gaps = 27/239 (11%) Query: 11 VLVQGLTGKAGTFHTEQAI--LYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKER 68 ++++G + A T T +AI L+ + G H + +T + + ++P Sbjct: 67 IVIKGASDDANT-ATLEAIEALFVRKDSAGSRHESRYATL-SSAHTHIP----------- 113 Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPN 128 +N +VI V + A +++E ++ +++ ++ + + D + +K + ++GP+ Sbjct: 114 -ESNLAVISVNGAFAAREARQALENDLNVML-FSDNVSLEDELALKQLAHQKGLLMMGPD 171 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG--- 185 C + + G+ + R+GS+GI+ SGT + E + + G G S +G GG Sbjct: 172 CGTAIINGA---GLCFANEVRRGSIGIIGASGTGSQELSVRIHEFGGGISQLIGTGGRDL 228 Query: 186 -DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 + + G +D L++ D TE I ++ + A A+ + + AK RK +V F+ Sbjct: 229 SEKIGGIMMLDALQMLEEDAQTEVIALISKPPAPA---VARKVLERAKSCRKPVVVCFL 284 >gi|296270205|ref|YP_003652837.1| FdrA family protein [Thermobispora bispora DSM 43833] gi|296092992|gb|ADG88944.1| FdrA family protein [Thermobispora bispora DSM 43833] Length = 457 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 16/161 (9%) Query: 64 EAKERTAANAS--------VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 EA RT +A+ ++ VP A +++IEA + +++ ++ +PV + +K Sbjct: 99 EAHPRTTRSAARSWDATMVLVSVPGEHAFAEALDAIEAGLSVMI-FSDNVPVEQEILLKD 157 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 R + ++GP+C G +G ++ R G VG+++ SGT + G+ Sbjct: 158 RARERGVLVMGPDC-GTAVVAGAGLGF--ANVLRPGPVGVVAASGTGAQQVTSLLDHAGV 214 Query: 176 GQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVMV 212 G S +G+GG V G + L D ATE IV++ Sbjct: 215 GVSHVLGVGGRDLSAEVGGRSAVQALRALDEDPATELIVLI 255 >gi|145591207|ref|YP_001153209.1| CoA-binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282975|gb|ABP50557.1| CoA-binding domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 484 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 11/134 (8%) Query: 118 EKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +K R++GPNC G+ D+ + + + G + LS+SG + A+ + E Sbjct: 119 QKHGMRVLGPNCIGVYNAFNGLDTMFLPVEKAARPPPGPIAFLSQSGAVMTAALDWAAGE 178 Query: 174 GLGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+G AV G V +FI+ FLA+ S++ + G + +AA+FLK AK Sbjct: 179 GIGVGIAVNFGNRADVTEADFIE----FLANSKEISVIALYLEGFRWKGDAARFLK-VAK 233 Query: 233 RGRKKPIVGFVAGK 246 R KP+V + AG+ Sbjct: 234 RS-SKPVVVYKAGR 246 >gi|170690978|ref|ZP_02882144.1| GCN5-related N-acetyltransferase [Burkholderia graminis C4D1M] gi|170144227|gb|EDT12389.1| GCN5-related N-acetyltransferase [Burkholderia graminis C4D1M] Length = 796 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P + G V +S+S LT + GLG S AV Sbjct: 125 RIVGPGSLGVVSPALRAHFGAPSCTVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ E+ + A +F+ R KP++ Sbjct: 185 LGGE--ADVDAGDVLDYLASDPGTRAILL--EL--DSVRAARKFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAP 249 +G+ P Sbjct: 239 RSGRADP 245 >gi|45357816|ref|NP_987373.1| CoA-binding domain-containing protein [Methanococcus maripaludis S2] gi|45047376|emb|CAF29809.1| acetyl-CoA synthetase (ADP-forming), alpha and beta subunits [Methanococcus maripaludis S2] Length = 702 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 16/193 (8%) Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIP-----VLDMVRVKARLEKSSSRLIGPNC 129 +I +P A DA+ E + + IT G VL+ R+KA +++ R IGPNC Sbjct: 73 IISIPAEYAVDAMEECGRKGVKAAIIITAGFAETNNHVLED-RLKAIIDQYGIRTIGPNC 131 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD-PV 188 G++ + G++ +S+SG + + + LG S V +G V Sbjct: 132 LGVINLHNHLNASFSKEFSNMGNIAFISQSGAIMTALLDIANYYNLGFSKIVSMGNKIDV 191 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 + E ++ LE D T+ + + I G +E +F+ K RKKP++ +GK+ Sbjct: 192 QEYELLNYLE---NDPHTKVVALY--IEGLKDE---KFISAAKKISRKKPVIVLKSGKSE 243 Query: 249 PPGRTM-GHAGAV 260 + H G++ Sbjct: 244 EGAKAASSHTGSL 256 >gi|296128164|ref|YP_003635414.1| CoA-binding domain protein [Cellulomonas flavigena DSM 20109] gi|296019979|gb|ADG73215.1| CoA-binding domain protein [Cellulomonas flavigena DSM 20109] Length = 707 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 109/263 (41%), Gaps = 37/263 (14%) Query: 6 DKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEA 65 DK +V+ L GT H ++P+ G G +P Sbjct: 33 DKAGHAMVRALRDFPGTLHL--------------VNPRGGEVL---GRAVIPSL------ 69 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEI-PLIVC---ITEGIPVLDMV--RVKARLEK 119 +E + + +V+ VPP A+ ++ A +VC E P V RV A + Sbjct: 70 REASDVDLAVLVVPPDAVPGALEDARAAGTRAAVVCAGGFAESGPAGARVQERVVAVARE 129 Query: 120 SSSRLIGPNCPGILTP-DSCKIGIMPG-SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + RL+GPN G + P D MP + G+VG++++SG + F ++ G+G Sbjct: 130 AGIRLLGPNTSGFVNPVDRTTANFMPAVADLPPGTVGLVAQSGGVNLALAFLLARAGVGL 189 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 VG+G +F +VL+ D+AT ++ + + G A+ A L + +K Sbjct: 190 RLGVGLGN--AVDVDFPEVLDHLALDDATTAVGL--HVEGVADGPA--LLAALRRTTARK 243 Query: 238 PIVGFVAGKTAPPGRTMGHAGAV 260 P+V G++ H GA+ Sbjct: 244 PVVALKVGRSDVSEFARSHTGAL 266 >gi|254445628|ref|ZP_05059104.1| acetyltransferase, GNAT family [Verrucomicrobiae bacterium DG1235] gi|198259936|gb|EDY84244.1| acetyltransferase, GNAT family [Verrucomicrobiae bacterium DG1235] Length = 892 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +K+ RLIGPNC G + P ++ G + +S+SG L + + +E +G Sbjct: 124 KKAKVRLIGPNCLGFIRPPIGLNASFSSAMALPGRLAFISQSGALCTAVLDWSIRENVGF 183 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S + IG + + D+++ D T SI++ E + ++A +F+ G+ K Sbjct: 184 SHFISIGS--MADIGYHDLIDYLGQDPNTSSILIYME----SIKDARRFISASRSIGKTK 237 Query: 238 PIVGFVAGKTA 248 PIV G+++ Sbjct: 238 PIVVLKVGRSS 248 >gi|283852914|ref|ZP_06370174.1| CoA-binding domain protein [Desulfovibrio sp. FW1012B] gi|283571672|gb|EFC19672.1| CoA-binding domain protein [Desulfovibrio sp. FW1012B] Length = 702 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 7/138 (5%) Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPNC G+++ + ++GS+ S+SG L + E +G S + + Sbjct: 130 MVGPNCLGLISTQNHNNASFAAGYPKEGSIAFFSQSGALCTAILDWALGENVGFSKFISL 189 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G V ++LE D T+ V++G I E A F+++ AK R+KP++ Sbjct: 190 GNKAVINEA--NMLEFLRTDPDTK--VILGYIENV--EHGAAFIEEAAKITREKPVIMIK 243 Query: 244 AGKTAPPGRTM-GHAGAV 260 +G T + H GA+ Sbjct: 244 SGTTTAGAKAASSHTGAI 261 >gi|71908331|ref|YP_285918.1| GCN5-related N-acetyltransferase:CoA-binding [Dechloromonas aromatica RCB] gi|71847952|gb|AAZ47448.1| GCN5-related N-acetyltransferase:CoA-binding protein [Dechloromonas aromatica RCB] Length = 905 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPNC GI+ PD + G++ ++S+SG + + +G S+ + Sbjct: 129 RILGPNCLGIIRPDLGLNATFSKTTAAPGNLALVSQSGAMCSAVLDWAKSNQVGFSSVIS 188 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IG +F ++L+ + D T I+M E + +F+ R KPI+ Sbjct: 189 IGM--TADVDFGEILDYLIYDSRTHYILMYVE----GIRNSRRFMSALRSAARIKPIILL 242 Query: 243 VAGK 246 AG+ Sbjct: 243 KAGR 246 >gi|207856007|ref|YP_002242658.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206707810|emb|CAR32095.1| FdrA protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 554 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 42/188 (22%), Positives = 87/188 (46%), Gaps = 16/188 (8%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +++ V A + ++++ + +++ ++ + + D +R+K R ++GP+C Sbjct: 118 ANLALVSVAGEYAAELAEQALDRSLNVMI-FSDNVTLDDEIRLKRRARDKGLLVMGPDCG 176 Query: 131 GILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP- 187 + ++ +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TAMIANTPLAFANVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDL 231 Query: 188 ---VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 V G + LE+ ADE ++ + V + A + A + KP+V Sbjct: 232 SAEVGGISALTALEILSADEKSQVLAFVSKPPADAVRQHII----AAMKATGKPVVALFL 287 Query: 245 GKTAPPGR 252 G ++P R Sbjct: 288 GFSSPVAR 295 >gi|197265237|ref|ZP_03165311.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197243492|gb|EDY26112.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 554 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 42/188 (22%), Positives = 87/188 (46%), Gaps = 16/188 (8%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +++ V A + ++++ + +++ ++ + + D +R+K R ++GP+C Sbjct: 118 ANLALVSVAGEYAAELAEQALDRSLNVMI-FSDNVTLDDEIRLKRRARDKGLLVMGPDCG 176 Query: 131 GILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP- 187 + ++ +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TAMIANTPLAFANVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDL 231 Query: 188 ---VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 V G + LE+ ADE ++ + V + A + A + KP+V Sbjct: 232 SAEVGGISALTALEILSADEKSQVLAFVSKPPADAVRQHII----AAMKATGKPVVALFL 287 Query: 245 GKTAPPGR 252 G ++P R Sbjct: 288 GFSSPVAR 295 >gi|170737107|ref|YP_001778367.1| GCN5-related N-acetyltransferase [Burkholderia cenocepacia MC0-3] gi|169819295|gb|ACA93877.1| GCN5-related N-acetyltransferase [Burkholderia cenocepacia MC0-3] Length = 785 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+L+P P R G V +S+S LT + GLG S V Sbjct: 125 RIVGPGSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWADARGLGFSHVVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + DVL+ +D T +I++ + +A +F+ R KP++ Sbjct: 185 LGSE--SDVDAGDVLDYLASDPGTRAILLELDTVRAAR----KFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAP 249 G+ P Sbjct: 239 RTGRADP 245 >gi|296242464|ref|YP_003649951.1| branched-chain acyl-CoA synthetase subunit alpha [Thermosphaera aggregans DSM 11486] gi|296095048|gb|ADG90999.1| branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit ;acetyl-CoA synthetase (ADP-forming) alpha subunit [Thermosphaera aggregans DSM 11486] Length = 456 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 19/217 (8%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGP 127 + +VI VP I E + + V IT G + V V+ ++ K R++GP Sbjct: 67 DVAVITVPAQEVPPVIEECARKGVKVAVVITAGFSEVGNVEVEEKMVETARKYGMRILGP 126 Query: 128 NCPGI-LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 N G TP + P + KG++ +++SG L + T +G S V +G Sbjct: 127 NIFGYAYTPLNINATFGPLEL-SKGNIAFITQSGALGIALMGWTIMNEIGLSALVSVG-- 183 Query: 187 PVKGTEFIDVLEL--FLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 +DV+EL +LAD+ ++ + + G +F++ K RKKP++ A Sbjct: 184 ---NMADLDVIELSEYLADDPHTKVITI-YLEGLKPGYGREFVERMRKVTRKKPVIVIKA 239 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGI 280 G+T + A A +G G++ A K+AGI Sbjct: 240 GRT----QRGASAAASHTGSLAGSDSLYEAAFKQAGI 272 >gi|168465632|ref|ZP_02699514.1| protein FdrA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195631725|gb|EDX50245.1| protein FdrA [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 554 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 42/188 (22%), Positives = 87/188 (46%), Gaps = 16/188 (8%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +++ V A + ++++ + +++ ++ + + D +R+K R ++GP+C Sbjct: 118 ANLALVSVAGEYAAELAEQALDRSLNVMI-FSDNVTLDDEIRLKRRARDKGLLVMGPDCG 176 Query: 131 GILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP- 187 + ++ +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TAMIANTPLAFANVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDL 231 Query: 188 ---VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 V G + LE+ ADE ++ + V + A + A + KP+V Sbjct: 232 SAEVGGISALTALEILSADEKSQVLAFVSKPPADAVRQHII----AAMKATGKPVVALFL 287 Query: 245 GKTAPPGR 252 G ++P R Sbjct: 288 GFSSPVAR 295 >gi|256391065|ref|YP_003112629.1| FdrA family protein [Catenulispora acidiphila DSM 44928] gi|256357291|gb|ACU70788.1| FdrA family protein [Catenulispora acidiphila DSM 44928] Length = 629 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 8/165 (4%) Query: 52 GNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV 111 G + P T A A RT+A ++I P + +ES+E I+ ++ IP+ V Sbjct: 130 GRPDQPAPRTTATALGRTSAPITLISTPGLASVAEAMESLEYGASPII-FSDNIPIHHEV 188 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 R+K + ++GP+C ++ G+ +I R G + +++ SGT + + Sbjct: 189 RLKEEARRRGLLVMGPDCGTVVL---HGTGLAFATIVRPGPISLVAASGTGAQQLMALLD 245 Query: 172 QEGLGQSTAVGIGG----DPVKGTEFIDVLELFLADEATESIVMV 212 G G +G+GG + V G + L D ATE I +V Sbjct: 246 AAGTGIHHCLGVGGRDLTEQVAGRSTLAALTALADDPATELITVV 290 >gi|194442658|ref|YP_002039773.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194401321|gb|ACF61543.1| protein FdrA [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 554 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 42/188 (22%), Positives = 87/188 (46%), Gaps = 16/188 (8%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +++ V A + ++++ + +++ ++ + + D +R+K R ++GP+C Sbjct: 118 ANLALVSVAGEYAAELAEQALDRSLNVMI-FSDNVTLDDEIRLKRRARDKGLLVMGPDCG 176 Query: 131 GILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP- 187 + ++ +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TAMIANTPLAFANVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDL 231 Query: 188 ---VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 V G + LE+ ADE ++ + V + A + A + KP+V Sbjct: 232 SAEVGGISALTALEILSADENSQVLAFVSKPPADAVRQHII----AAMKATGKPVVALFL 287 Query: 245 GKTAPPGR 252 G ++P R Sbjct: 288 GFSSPVAR 295 >gi|313902908|ref|ZP_07836304.1| protein FdrA [Thermaerobacter subterraneus DSM 13965] gi|313466843|gb|EFR62361.1| protein FdrA [Thermaerobacter subterraneus DSM 13965] Length = 673 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 12/188 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I VP A E+++ + + C ++ +P+ D V +KA+ + +GP+C Sbjct: 157 ANLALISVPGRFARWVAEEALDLGL-HVFCFSDNVPLDDEVALKAQAARRGLLFMGPDCG 215 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG----D 186 L G+ + R G GI++ SGT E Q + G+G A+G GG + Sbjct: 216 TALV---AGTGLGFANAVRPGPAGIVAASGTGLQEVACQLDRLGVGVRHAIGTGGRDLHE 272 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 V G F + D T IV + + A ++ Q L+ A G KP+V G+ Sbjct: 273 AVGGATFRAAVAALARDPGTRLIVALSKPPSPAVKQ--QVLEVLATCG--KPVVVHFLGE 328 Query: 247 TAPPGRTM 254 P T+ Sbjct: 329 PDQPCPTL 336 >gi|168261029|ref|ZP_02683002.1| protein FdrA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350061|gb|EDZ36692.1| protein FdrA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 554 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 16/188 (8%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +++ V A + ++++ + +++ ++ + + D +R+K R ++GP+C Sbjct: 118 ANLALVSVAGEYAAELAEQALDRSLNVMI-FSDNVTLYDEIRLKRRARDKGLLVMGPDCG 176 Query: 131 GILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP- 187 + ++ +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TAMIANTPLAFANVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDL 231 Query: 188 ---VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 V G + L++ ADE ++ + V + A + A + KP+V Sbjct: 232 SAEVGGISALTALDILSADEKSQVLAFVSKPPADAVRQHII----AAMKATGKPVVALFL 287 Query: 245 GKTAPPGR 252 G ++P R Sbjct: 288 GFSSPVAR 295 >gi|116693618|ref|YP_839151.1| GCN5-related N-acetyltransferase [Burkholderia cenocepacia HI2424] gi|116651618|gb|ABK12258.1| GCN5-related N-acetyltransferase [Burkholderia cenocepacia HI2424] Length = 806 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+L+P P R G V +S+S LT + GLG S V Sbjct: 146 RIVGPGSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWADARGLGFSHVVA 205 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + DVL+ +D T +I++ + +A +F+ R KP++ Sbjct: 206 LGSE--SDVDAGDVLDYLASDPGTRAILLELDTVRAAR----KFMSAARAAARNKPVLAL 259 Query: 243 VAGKTAP 249 G+ P Sbjct: 260 RTGRADP 266 >gi|11498792|ref|NP_070021.1| hypothetical protein AF1192 [Archaeoglobus fulgidus DSM 4304] gi|2649402|gb|AAB90053.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 664 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 34/205 (16%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI------------PVLDMVRVKARLEK 119 + +VI VP A + + E E + I+ ++ G ++++ R K Sbjct: 283 DLAVIAVPSKNAIEVVKECAEKGVKGIIVLSAGFAEGWEQGKELERQIVEIAR------K 336 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRK---GSVGILSRSGTLTYEAVFQTSQEGLG 176 S R++GPN GIL P+S S+ RK G++G+L++SG + + G Sbjct: 337 SGMRIVGPNTMGILDPESGLTSFF--SVLRKIGQGNIGVLAQSGAVANFILLPLWHVGFS 394 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 + A+G D + ++VL L DE T + E G + + + +K Sbjct: 395 KIVAIGNKADVGE----VEVLNFLLKDEKTRVVAAYLE-GFTNGRKFYELMK-----AST 444 Query: 237 KPIVGFVAGKTAPPGRT-MGHAGAV 260 KPIV +G+T R+ + H ++ Sbjct: 445 KPIVVLKSGRTEAGKRSALSHTASI 469 >gi|331645704|ref|ZP_08346807.1| protein FdrA [Escherichia coli M605] gi|330910309|gb|EGH38819.1| protein fdrA [Escherichia coli AA86] gi|331044456|gb|EGI16583.1| protein FdrA [Escherichia coli M605] Length = 555 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDCG 176 Query: 131 GIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + TP + +MPG G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TSMIAATPLAFA-NVMPG-----GNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|157382778|gb|ABV48826.1| ATP citrate lyase alpha subunit [Lebetimonas acidiphila] Length = 335 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 8/97 (8%) Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAG--- 245 G+ FID L + + ++++GE+GG E + + +K+ G+ KP++G+ G Sbjct: 4 GSVFIDHLLRMEKNPQVKYMILLGEVGGREEYKVIEAIKE----GKITKPVIGWCIGTIA 59 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 K G GHAGA + AE K AMKEAGI + Sbjct: 60 KYFSSGVQFGHAGASANAQAETAEAKNRAMKEAGIHV 96 >gi|107027672|ref|YP_625183.1| GCN5-related N-acetyltransferase [Burkholderia cenocepacia AU 1054] gi|105897046|gb|ABF80210.1| GCN5-related N-acetyltransferase [Burkholderia cenocepacia AU 1054] Length = 785 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+L+P P R G V +S+S LT + GLG S V Sbjct: 125 RIVGPGSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWADARGLGFSHVVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + DVL+ +D T +I++ + +A +F+ R KP++ Sbjct: 185 LGSE--SDVDAGDVLDYLASDPGTRAILLELDTVRAAR----KFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAP 249 G+ P Sbjct: 239 RTGRADP 245 >gi|254249659|ref|ZP_04942979.1| GCN5-related N-acetyltransferase [Burkholderia cenocepacia PC184] gi|124876160|gb|EAY66150.1| GCN5-related N-acetyltransferase [Burkholderia cenocepacia PC184] Length = 785 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+L+P P R G V +S+S LT + GLG S V Sbjct: 125 RIVGPGSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWADARGLGFSHVVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + DVL+ +D T +I++ + +A +F+ R KP++ Sbjct: 185 LGSE--SDVDAGDVLDYLASDPGTRAILLELDTVRAAR----KFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAP 249 G+ P Sbjct: 239 RTGRADP 245 >gi|328956431|ref|YP_004373817.1| hypothetical protein DUF1116 [Carnobacterium sp. 17-4] gi|328672755|gb|AEB28801.1| hypothetical protein DUF1116 [Carnobacterium sp. 17-4] Length = 1002 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 16/186 (8%) Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGP 127 +T AN ++I VP A D I ++++ + + V ++ + D VR+K + + ++GP Sbjct: 112 QTDANIALISVPGIYASDEIEKALDNNLHVFV-FSDNVSKADEVRLKKKAHEKGLLVMGP 170 Query: 128 NC-PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG- 185 +C GI++ I + ++ + G++GI+ SGT E + G G A+G GG Sbjct: 171 DCGTGIIS----NIPMAFTNVVKSGNIGIVGASGTGIQEVTTIIDRLGGGVIHAIGTGGR 226 Query: 186 ---DPVKGTEFIDVLELFLADEATESIVMVGEIGGSA-EEEAAQFLKDEAKRGRKKPIVG 241 + V D L E T+ IV++ + A +E Q L D KP+V Sbjct: 227 DLSEEVGAITMKDALIGLAEHEPTDVIVVISKPPAPAVRDEVVQLLHD-----LPKPVVA 281 Query: 242 FVAGKT 247 G+ Sbjct: 282 IFVGEN 287 >gi|119184196|ref|XP_001243026.1| hypothetical protein CIMG_06922 [Coccidioides immitis RS] Length = 148 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 5/84 (5%) Query: 30 LYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE 89 L T++VGG+ P G ++ +PVF +V A+E+ +A+ +YVP + AI E Sbjct: 68 LQWGTKIVGGVKPGV-----EGEHLGLPVFPSVRVAQEKARPDATAVYVPGNQTAAAIEE 122 Query: 90 SIEAEIPLIVCITEGIPVLDMVRV 113 +IEAEIPL+V + E +P+ D++RV Sbjct: 123 AIEAEIPLVVAVAEHVPIHDILRV 146 >gi|21226460|ref|NP_632382.1| Acetyl-CoA synthetase subunit alpha [Methanosarcina mazei Go1] gi|20904723|gb|AAM30054.1| Acetyl-CoA synthetase, alpha subunit [Methanosarcina mazei Go1] Length = 468 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 11/149 (7%) Query: 117 LEKSSSRLIGPNCPGILTPDSC--KIGIMPGSIFR--KGSVGILSRSGTLTYEAVFQTSQ 172 L++ R +GPNC GI S I I R + V +L++SG+ + + + Sbjct: 132 LKEKGIRAMGPNCLGIYDTVSNVDTFFIEREKIERPVRDGVSVLTQSGSFAAMIMDELAN 191 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 EG G + V G + V E D LE DEAT+++ + E + + +FLK + Sbjct: 192 EGAGVARVVSYG-NKVDVNE-SDCLEFLAEDEATKAVALYIE----SVSDGRKFLKAASG 245 Query: 233 RGRKKPIVGFVAGKTAPPGRTM-GHAGAV 260 +KKP+V GK P R H GA+ Sbjct: 246 CVKKKPVVALKVGKREPGARAASSHTGAI 274 >gi|222032139|emb|CAP74878.1| Uncharacterized protein yahF [Escherichia coli LF82] gi|312944918|gb|ADR25745.1| putative enzyme with acyl-CoA domain [Escherichia coli O83:H1 str. NRG 857C] Length = 515 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 104/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A +S++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQSLQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|320174887|gb|EFW50007.1| Protein fdrA [Shigella dysenteriae CDC 74-1112] Length = 434 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/194 (23%), Positives = 90/194 (46%), Gaps = 18/194 (9%) Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLI 125 ++ + AN ++I V A + ++++ + +++ ++ + + D +++K R + ++ Sbjct: 113 QKLSDANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVM 171 Query: 126 GPNCPGIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 GP+C + TP + +MP +G++G++ SGT E Q +Q G G + A+G Sbjct: 172 GPDCGTSMIAGTPLAFA-NVMP-----EGNIGVIGASGTGIQELCSQIAQAGEGITHAIG 225 Query: 183 IG----GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +G V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGERDLSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|16263072|ref|NP_435865.1| hypothetical protein SMa1146 [Sinorhizobium meliloti 1021] gi|14523730|gb|AAK65277.1| conserved hypothetical protein [Sinorhizobium meliloti 1021] Length = 899 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 12/152 (7%) Query: 99 VCITEGIPVLDMVRVKARLEKSSS---RLIGPNCPGILTPDSCKIGIMPGSI-FRKGSVG 154 V IT GI +R +A L+ + R+IGPN G++ P S K+ + + G + Sbjct: 98 VIITAGISADQDLR-QAMLDAAKPFLLRIIGPNTVGLIVP-SAKLNASFAHLQAQPGGIA 155 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 +LS+SG + + + +G S V +G + + D L+L D T +IVM E Sbjct: 156 LLSQSGAIATSLIDWAADNDVGFSKVVSLGD--MADADAGDFLDLLAGDPETHAIVMYLE 213 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 A +FL R KPIV AG+ Sbjct: 214 ----AISNPRKFLSAARAAARVKPIVAIKAGR 241 >gi|72161715|ref|YP_289372.1| hypothetical protein Tfu_1311 [Thermobifida fusca YX] gi|71915447|gb|AAZ55349.1| conserved hypothetical protein [Thermobifida fusca YX] Length = 886 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 26/234 (11%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPG 131 + +V+ VPP D E + +V IT + + A RL+GPNC G Sbjct: 257 DLAVVSVPPDAVLDVARACGEQGVGALVVITADLDTETSQELLAVCRWHGMRLVGPNCFG 316 Query: 132 ILTPDSCKIGIMPGSIF-----RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 + S G+ + F R G G++ +SG + + S+ +G S+ V G Sbjct: 317 VA---SLSDGVRLQATFAAEAPRPGQAGLVVQSGGIGITLLEHLSRLDVGISSFVSTGNK 373 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + D+L+ + D T +M E G+ +F + + GR+KPI+ VAG+ Sbjct: 374 LDVSSN--DLLQWWEDDPDTAMAIMHVESFGNPR----KFSRIARRLGRRKPILTVVAGR 427 Query: 247 TAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 + R H GA ++ A + ++AG+ A RSL EL+G+ Sbjct: 428 STAGQRAAASHTGASLT----PALTTESLFEQAGVVAA-------RSLDELVGT 470 >gi|301057368|ref|ZP_07198485.1| CoA binding domain protein [delta proteobacterium NaphS2] gi|300448511|gb|EFK12159.1| CoA binding domain protein [delta proteobacterium NaphS2] Length = 454 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 10/132 (7%) Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRK---GSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +GPNC GI +P +P + G+V ++S+SG + + + S EG+G S Sbjct: 124 FVGPNCLGIFSPARMDTFFLPPERTVRPAPGNVALVSQSGGVLVDQIVNFSGEGIGLSLG 183 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 V IG + + + +LE D T++I E G ++ +F+ EA +KPIV Sbjct: 184 VSIGNKAL--VDEVTLLEYLSEDPKTDAIAFYLE--GFSKNGGRKFV--EAACQCEKPIV 237 Query: 241 GFVAGKTAPPGR 252 +G++ P GR Sbjct: 238 VLKSGRS-PEGR 248 >gi|213418394|ref|ZP_03351460.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 34 Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 19/31 (61%), Positives = 25/31 (80%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY 31 MS+L++K+T V+ QG TG GTFH+EQAI Y Sbjct: 1 MSVLINKDTNVICQGFTGSQGTFHSEQAIAY 31 >gi|300820236|ref|ZP_07100388.1| membrane protein FdrA [Escherichia coli MS 119-7] gi|300527021|gb|EFK48090.1| membrane protein FdrA [Escherichia coli MS 119-7] Length = 555 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELTNQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDCG 176 Query: 131 GIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + TP + +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TSMIAGTPLAFA-NVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP+V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPMVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|297190800|ref|ZP_06908198.1| acyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486] gi|197722581|gb|EDY66489.1| acyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486] Length = 716 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 59/220 (26%), Positives = 92/220 (41%), Gaps = 19/220 (8%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGP 127 + +V +P A+ E IP V I G ++A + E+ RL+GP Sbjct: 322 DVAVFAIPAKFVASALEEVGRKGIPNAVLIPSGFAETGEHELQAEIVAIAERYGVRLLGP 381 Query: 128 NCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 N G + D C P + KG V + S+SG + + G S VG+G Sbjct: 382 NIYGYYSTWQDLCATFCTPYDV--KGGVALTSQSGGIGMAILGFARTTRTGVSAIVGLGN 439 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 + D+L F D T+ I M E ++ F++ + RKKP+V AG Sbjct: 440 K--SDLDEDDLLTWFGEDPNTQCIAMHLE----DLKDGRAFVEAARETVRKKPVVVLKAG 493 Query: 246 KTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGICIAP 284 +TA + G H GA+ G D + +++AG+ AP Sbjct: 494 RTAAGAKAAGSHTGAL--AGDDAVYDDV--LRQAGVIRAP 529 >gi|145594009|ref|YP_001158306.1| GCN5-related N-acetyltransferase [Salinispora tropica CNB-440] gi|145303346|gb|ABP53928.1| GCN5-related N-acetyltransferase [Salinispora tropica CNB-440] Length = 868 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 26/222 (11%) Query: 31 YCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIES 90 Y T V +HP S G +P + + AEA + +V+ VPP+ + ++ Sbjct: 223 YGFTGAVVPVHP---SARMVAG---LPAYPSAAEAG--LPVDLAVVAVPPAAMETVVADA 274 Query: 91 IEAEIPLIVCITEGIPV--LDMVRVKARLEKSSS----RLIGPNCPGILTPDSCKIGIMP 144 A +V I+ G +D + RL +++ R+IGPNC G+ S ++ + Sbjct: 275 AGAGAHGLVVISAGFAEAGVDGAVAQRRLVRAAHAAGMRIIGPNCLGMAN-TSTEVRLNA 333 Query: 145 GSIFR---KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP-VKGTEFIDVLELF 200 R G VG+ S+SG + + + GLG S+ V G V G D+L+ + Sbjct: 334 TLAPRLPIPGRVGLFSQSGAFGVALLAEVERRGLGLSSFVSAGNRADVSGN---DLLQYW 390 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 D +T+ I++ E G+ +F + GR+KPIV Sbjct: 391 QDDPSTDVILLYLETFGNPR----KFARLARGIGREKPIVAL 428 >gi|163854894|ref|YP_001629192.1| hypothetical protein Bpet0589 [Bordetella petrii DSM 12804] gi|163258622|emb|CAP40921.1| conserved Hypothetical protein [Bordetella petrii] Length = 824 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 8/139 (5%) Query: 114 KARLEKSSSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 +A EK+ L+GP G P + + P ++ R G V ++++S ++T + Sbjct: 110 RAWAEKNGCELLGPRAFGAQRPHAGLNLSQHP-TLARAGRVALVAQSRSITAAVMDWAED 168 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 +G STAV +G + G VL+ +D T+SIV+ E G+A E F+ Sbjct: 169 VHIGFSTAVSLGDEAAVG--MAQVLDFLASDPRTDSIVLYLEDVGTARE----FMSTLRA 222 Query: 233 RGRKKPIVGFVAGKTAPPG 251 KP++ AG+ P G Sbjct: 223 AASVKPVIVLKAGRDGPAG 241 >gi|115359594|ref|YP_776732.1| GCN5-related N-acetyltransferase [Burkholderia ambifaria AMMD] gi|115284882|gb|ABI90398.1| GCN5-related N-acetyltransferase [Burkholderia ambifaria AMMD] Length = 813 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+L+P P R G V +S+S LT + GLG S V Sbjct: 153 RIVGPGSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWADARGLGFSHVVA 212 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + DVL+ +D T +I++ + +A +F+ R KP++ Sbjct: 213 LGSE--ADVDAGDVLDYLASDPGTRAILLELDTVCAAR----KFMSAARAAARNKPVLAL 266 Query: 243 VAGKTAP 249 G+ P Sbjct: 267 RTGRADP 273 >gi|171317205|ref|ZP_02906405.1| GCN5-related N-acetyltransferase [Burkholderia ambifaria MEX-5] gi|171097636|gb|EDT42470.1| GCN5-related N-acetyltransferase [Burkholderia ambifaria MEX-5] Length = 785 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+L+P P R G V +S+S LT + GLG S V Sbjct: 125 RIVGPGSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWADARGLGFSHVVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + DVL+ +D T +I++ + +A +F+ R KP++ Sbjct: 185 LGSE--ADVDAGDVLDYLASDPGTRAILLELDTVCAAR----KFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAP 249 G+ P Sbjct: 239 RTGRADP 245 >gi|315287711|gb|EFU47114.1| bacterial FdrA protein [Escherichia coli MS 110-3] Length = 515 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 104/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + L+GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLLMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|150403176|ref|YP_001330470.1| CoA-binding domain-containing protein [Methanococcus maripaludis C7] gi|150034206|gb|ABR66319.1| CoA-binding domain protein [Methanococcus maripaludis C7] Length = 703 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 16/193 (8%) Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIP-----VLDMVRVKARLEKSSSRLIGPNC 129 +I +P A DA+ E + + IT G VL+ R+K+ +E+ R IGPNC Sbjct: 73 IISIPAEYAVDAMEECGRKGVKSAIIITAGFAETNNHVLED-RLKSIIEQYGIRTIGPNC 131 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD-PV 188 G++ + G++ +S+SG + + + LG S V +G V Sbjct: 132 LGVINLHNHLNASFSKEFSNMGNIAFISQSGAIMTALLDIANYYNLGFSKIVSMGNKIDV 191 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 + E ++ LE D T+ + + I G +E +F+ K RKKP++ +GK+ Sbjct: 192 QEYELLNYLE---NDPHTKVVALY--IEGLKDE---KFISAAKKISRKKPVIVLKSGKSE 243 Query: 249 PPGRTM-GHAGAV 260 + H G++ Sbjct: 244 EGAKAASSHTGSL 256 >gi|157382776|gb|ABV48825.1| ATP citrate lyase alpha subunit [Hydrogenimonas thermophila] Length = 325 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 8/115 (6%) Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAG--- 245 G+ FID L + + ++++GE+GG+ E + + +K G+ KP++ + G Sbjct: 4 GSVFIDNLLRMQDNPDVKYMILLGEVGGTEEYKVIEAVKS----GKITKPVIAWCIGTIA 59 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 K G GHAGA + + AE K AM+EAGI + S + + + E+ L Sbjct: 60 KHFSSGVQFGHAGASANAERETAEAKNKAMREAGIHVPESFNDLPKVINEVYTDL 114 >gi|171186085|ref|YP_001795004.1| CoA-binding domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170935297|gb|ACB40558.1| CoA-binding domain protein [Thermoproteus neutrophilus V24Sta] Length = 461 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 11/177 (6%) Query: 95 IPLIVCITEGIPVLDMVRVKARLEKSSS----RLIGPNCPGILTP----DSCKIGIMPGS 146 IP V I+ G ++ RL ++ RL+GPNC G+ D+ + + Sbjct: 93 IPAAVVISSGFAEAGNQELEQRLASAARQYGVRLLGPNCIGVYNAFSNFDTLFLPLDRAG 152 Query: 147 IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 G + ++S+SG + + ++ G+G V G + TE ++++E F AD+ Sbjct: 153 RPPPGPLALISQSGAVAAAIMDWAARRGIGLGLVVNYG-NKADVTE-VELIEHFAADDRI 210 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISG 263 I + E G EAA+FL K KKP+V + AG+ R + A ++G Sbjct: 211 RVITIYLE-GFKYRGEAAKFLNAVRKTVPKKPVVVYKAGRGRAAQRAVRSHTAAMAG 266 >gi|46581373|ref|YP_012181.1| acetyltransferase [Desulfovibrio vulgaris str. Hildenborough] gi|120601450|ref|YP_965850.1| GCN5-related N-acetyltransferase [Desulfovibrio vulgaris DP4] gi|46450795|gb|AAS97441.1| acetyltransferase, GNAT family [Desulfovibrio vulgaris str. Hildenborough] gi|120561679|gb|ABM27423.1| GCN5-related N-acetyltransferase [Desulfovibrio vulgaris DP4] gi|311235031|gb|ADP87885.1| GCN5-related N-acetyltransferase [Desulfovibrio vulgaris RCH1] Length = 898 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 19/187 (10%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEKSSS---RL 124 + ++I PP + I E + +V +++G D V+ A L+ + R+ Sbjct: 71 DLAIICSPPESVAEHIAELGKRGTRAVVVLSQGFYRYDGERREVQRNAVLQAARRHGVRV 130 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRK---GSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +GPNC G ++P +GI + RK G V +S+S +L + + + +G S + Sbjct: 131 LGPNCLGFVSP---AVGINASLMPRKALPGKVAFVSQSDSLFSTVLDWATSKKIGFSHCI 187 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G F D+L+ +D T ++++ E ++A +F+ R KP++ Sbjct: 188 ALGDR--YDIHFHDILDYLNSDVNTRAVLLYLE----TIDKARRFMSAARALARNKPVLV 241 Query: 242 FVAGKTA 248 +G++A Sbjct: 242 VKSGRSA 248 >gi|172064405|ref|YP_001812056.1| GCN5-related N-acetyltransferase [Burkholderia ambifaria MC40-6] gi|171996922|gb|ACB67840.1| GCN5-related N-acetyltransferase [Burkholderia ambifaria MC40-6] Length = 785 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+L+P P R G V +S+S LT + GLG S V Sbjct: 125 RIVGPGSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWADARGLGFSHVVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + DVL+ +D T +I++ + +A +F+ R KP++ Sbjct: 185 LGSE--ADVDAGDVLDYLASDPGTRAILLELDTVCAAR----KFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAP 249 G+ P Sbjct: 239 RTGRADP 245 >gi|157382716|gb|ABV48796.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA28] Length = 346 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 8/107 (7%) Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVG 241 IGGD G++F+D + F + + +V++GE+GG A+ +KD GR KP++ Sbjct: 2 IGGDRFPGSDFLDHMLRFEKNPQVKMMVLLGEVGGELGYRVAEAIKD----GRITKPVIA 57 Query: 242 FVAGKTAPP---GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + G + GHAGA + A+ K A++EAG + S Sbjct: 58 WCIGTISKHFGGEVQFGHAGAKAGAERETADAKNEALREAGAYVPKS 104 >gi|307325799|ref|ZP_07604999.1| CoA-binding domain protein [Streptomyces violaceusniger Tu 4113] gi|306888587|gb|EFN19573.1| CoA-binding domain protein [Streptomyces violaceusniger Tu 4113] Length = 691 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 65/248 (26%), Positives = 109/248 (43%), Gaps = 25/248 (10%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL------DMVR 112 + ++A +R A+ +VI VP +G A+ +++ A IV IT G L Sbjct: 69 YRSMAALPQR--ADLAVIAVPAAGFESAVEDALAAGARAIVGITAGFAELGTEGEARQTA 126 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + R+ ++ + L+GPNC G+L DS + + G VG++S+SG + E ++ Sbjct: 127 LARRVREAGAVLLGPNCLGVL--DSGSELYLSSNPLPPGPVGLISQSGNMALELSRILAE 184 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLG S +G D++ + T+ I + E G + F+ A+ Sbjct: 185 RGLGFSRFASLGNQ--ADITVADLIRAYTVHPETKLIAVYSEDFGDGRD----FVAAAAE 238 Query: 233 RGRK-KPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAM-KEAGICIAPSPARI 289 KP+V G + R H GA++S I+A + AGI SP ++ Sbjct: 239 ATTMGKPVVLLTVGASEASVRGAKSHTGALVSDSS-----VIDAACRAAGIDRVASPRQM 293 Query: 290 GRSLVELL 297 SL+E L Sbjct: 294 A-SLLEAL 300 >gi|187921554|ref|YP_001890586.1| GCN5-related N-acetyltransferase [Burkholderia phytofirmans PsJN] gi|187719992|gb|ACD21215.1| GCN5-related N-acetyltransferase [Burkholderia phytofirmans PsJN] Length = 834 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P + G V +S+S LT + GLG S AV Sbjct: 125 RIVGPGSLGVVSPALRAHLGAPSCTVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ E+ + A +F+ R KP++ Sbjct: 185 LGGE--ADVDAGDVLDYLASDPGTRAILL--EL--DSVRAARKFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAP 249 +G+ P Sbjct: 239 RSGRADP 245 >gi|261856448|ref|YP_003263731.1| CoA-binding protein [Halothiobacillus neapolitanus c2] gi|261836917|gb|ACX96684.1| CoA-binding domain protein [Halothiobacillus neapolitanus c2] Length = 900 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 13/161 (8%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RL+GPNC G++ P + G + ++S+SG L + G+G S A+ Sbjct: 132 RLMGPNCLGLMRPSIGLNATFSHNQAFPGKLALVSQSGALVTAVLDWAQSRGVGFS-AIA 190 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 GD +F D+L+ D T I++ E ++A FL R KP++ Sbjct: 191 STGD-AADLDFGDLLDYLALDTQTTGILLYIE----GIKDARHFLSGLRAAARMKPVIVL 245 Query: 243 VAGKTAPPGRTMG-HAGAVISGGKGGAEDKIN-AMKEAGIC 281 + + A + H GA+I GA+D + A+ AG+ Sbjct: 246 KSARHAAGSKAAATHTGALI-----GADDVFDAALTRAGVV 281 >gi|224368786|ref|YP_002602947.1| SucD3 [Desulfobacterium autotrophicum HRM2] gi|223691502|gb|ACN14785.1| SucD3 [Desulfobacterium autotrophicum HRM2] Length = 708 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 17/162 (10%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR---------VKARLEKSSS 122 + +++ +PP A +A+ E I + +V ++ G VR +KA ++ Sbjct: 69 DLAMVILPPKLALNAVKECIAKGVKGVVIVSAG---FKEVRGEGAEIEEQIKAVCRAANI 125 Query: 123 RLIGPNCPGIL--TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNC G++ +PD + G+V +S+SG L + + +G G S Sbjct: 126 RLVGPNCLGVINPSPDVSLNASFSSRMPTAGNVSFISQSGALCTAVLDFAADKGFGFSKF 185 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESI-VMVGEIGGSAEE 221 + IG + +D+L + D T+ + + + E+ AEE Sbjct: 186 ISIGNK--ADVDELDLLRYYHKDPNTDVVMIYMEELSRGAEE 225 >gi|242399812|ref|YP_002995237.1| Acyl-CoA synthetase, subunit alpha [Thermococcus sibiricus MM 739] gi|242266206|gb|ACS90888.1| Acyl-CoA synthetase, subunit alpha [Thermococcus sibiricus MM 739] Length = 448 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 23/220 (10%) Query: 51 GGNVNVPVFTTVAEAKERTAANASVI-----YVPPSGAGDAIIESIEAEIPLIVCITEGI 105 GG V V E K + ++I +VPP +I+ I ++ V I+ G Sbjct: 45 GGEVEVANVRLKIEKKLEKNVDVAIIAIPAKFVPP------LIDEIGDKVKGAVVISAGF 98 Query: 106 PVLDMVRVKARL-EKSSSR---LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGT 161 + V ++ L EK+ ++ +IGPNC GI + G + KG + ++S+SG Sbjct: 99 SEVGNVDLEKELIEKARNKGVKVIGPNCAGIFGVHANFFGSFEVRV-NKGGLALISQSGA 157 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 A+ ++EG+G S V G+ TE D L+ F D+ T+ I + E + Sbjct: 158 FGGAALAMGNEEGIGFSAFVSY-GNAADLTE-SDFLKYFADDKNTKVIALYIE----GVK 211 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAV 260 + +F++ KKP++ AGK+ + H G++ Sbjct: 212 DGRKFIEALKYATSKKPVIVLKAGKSKSGSKAAQSHTGSM 251 >gi|313126866|ref|YP_004037136.1| acyl-CoA synthetase (ndp forming) [Halogeometricum borinquense DSM 11551] gi|312293231|gb|ADQ67691.1| acyl-CoA synthetase (NDP forming) [Halogeometricum borinquense DSM 11551] Length = 697 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 35/257 (13%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 ++PK + VP V E+ A+ +VI VPP A DA+ ES +A I +V Sbjct: 44 VNPKYDEVF------GVPAVADVGESD----ADLAVIVVPPHIAVDAVRESGKAGIRNVV 93 Query: 100 CITEGI---------PVLDMVRVKARLEKSSSRLIGPNCPGIL-TPDSCKIGIMPGSIFR 149 +T G ++ V E+ L+GPN G++ TP P + Sbjct: 94 VVTAGFGETGSEGASREQELTEVA---EEYDLNLVGPNSLGLMSTPTGLNATFGPDNAL- 149 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV-KGTEFIDVLELFLADEATES 208 G++ +S+SG + + +G+G V +G V +F+D + DE TE Sbjct: 150 PGNMSFMSQSGAFITAVLDWANDQGIGFKDVVSLGNKAVLDEADFVDA---WGDDEDTE- 205 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 V++G + G + E +F+ + + PIV +G+T + I+G Sbjct: 206 -VIIGYLEGIS--EGREFIDTAREVTQDTPIVLVKSGRTDAGAQAASSHTGTIAGSDQAY 262 Query: 269 EDKINAMKEAGICIAPS 285 E + +AG+ A S Sbjct: 263 E---AGLDQAGVIRAES 276 >gi|118580012|ref|YP_901262.1| CoA-binding domain-containing protein [Pelobacter propionicus DSM 2379] gi|118502722|gb|ABK99204.1| CoA-binding domain protein [Pelobacter propionicus DSM 2379] Length = 451 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 10/130 (7%) Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIFR---KGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RLIGPNC G+ P +P ++ + KG+V I+S+SG L + Q +G S Sbjct: 121 RLIGPNCLGVYNPRHGLDTMFLPHALLKKPGKGNVAIVSQSGALVVCLLEAVRQANMGVS 180 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + G + DV E D T ++ E G+ +F++ KP Sbjct: 181 KVINYGN--AVDLDAADVYEYLAEDRETRVVISYLESVGNGR----RFIEAARNLDNTKP 234 Query: 239 IVGFVAGKTA 248 ++ AGK A Sbjct: 235 LLVLKAGKGA 244 >gi|325520572|gb|EGC99649.1| putative acetyl-CoA synthetase [Burkholderia sp. TJI49] Length = 312 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+L+P P R G V +S+S LT + GLG S V Sbjct: 125 RIVGPGSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWAGARGLGFSHVVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + DV++ +D T +I++ E+ + A +F+ R KP++ Sbjct: 185 LGSE--ADVDAGDVIDYLASDPGTRAILL--EL--DSVRAARKFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAP 249 G+ P Sbjct: 239 RTGRADP 245 >gi|224125658|ref|XP_002329686.1| predicted protein [Populus trichocarpa] gi|222870594|gb|EEF07725.1| predicted protein [Populus trichocarpa] Length = 74 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 31/39 (79%) Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +++SGGKG A+DKI ++EAG+ + SPA+IG +++++ Sbjct: 29 SIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVAMLDVF 67 >gi|134292400|ref|YP_001116136.1| GCN5-related N-acetyltransferase [Burkholderia vietnamiensis G4] gi|134135557|gb|ABO56671.1| GCN5-related N-acetyltransferase [Burkholderia vietnamiensis G4] Length = 813 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+L+P P R G V +S+S LT + + GLG S V Sbjct: 153 RIVGPGSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWANARGLGFSHVVA 212 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + DVL+ +D T +I++ + +A +F+ R KP++ Sbjct: 213 LGSE--ADVDAGDVLDYLASDPGTRAILLELDTVCAAR----KFMSAARAAARNKPVLAL 266 Query: 243 VAGKTAP 249 G+ P Sbjct: 267 RTGRGDP 273 >gi|327439812|dbj|BAK16177.1| acyl-CoA synthetase [Solibacillus silvestris StLB046] Length = 721 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 21/154 (13%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFR-----KGSVGILSRS---GTLTYEAVFQTSQEG 174 RL+GPNC G++ + IG S+ K VG +S+S G LTY A +Q G Sbjct: 133 RLLGPNCVGLVNTSNGLIGTFSSSVLDVPMSGKRGVGYVSQSGAFGVLTYMA---AAQYG 189 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 + + + G + T D ++ + D+ E V+ G I G+ E LK A++ Sbjct: 190 INFNYFISSGNE--MDTTMEDYIDYMVHDDEIE--VISGYIEGAKNPEK---LKQAARKA 242 Query: 235 --RKKPIVGFVAGKTAPPGRTMG-HAGAVISGGK 265 +KKPIV G++ R H GA+ K Sbjct: 243 LEKKKPIVLMKTGRSDAGSRAAASHTGALAGSDK 276 >gi|168240363|ref|ZP_02665295.1| protein FdrA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194450118|ref|YP_002044562.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194408422|gb|ACF68641.1| protein FdrA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205340416|gb|EDZ27180.1| protein FdrA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 554 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 15/161 (9%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGI 155 ++ ++ + + D +R+K R ++GP+C + ++ +MP +G++G+ Sbjct: 144 VMIFSDNVTLDDEIRLKRRARDKGLLVMGPDCGTAMIANTPLAFANVMP-----EGNIGV 198 Query: 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVM 211 + SGT E Q + G G + A+G+GG V G + LE+ ADE ++ + Sbjct: 199 IGASGTGIQELCSQIALAGEGITHAIGLGGRDLSAEVGGISALTALEILSADEKSQVLAF 258 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + A + A + KP+V G ++P R Sbjct: 259 VSKPPADAVRQHII----AAMKAAGKPVVALFLGFSSPVAR 295 >gi|168818849|ref|ZP_02830849.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344043|gb|EDZ30807.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320084804|emb|CBY94594.1| Protein fdrA [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 554 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 16/188 (8%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +++ V A + ++++ + +++ ++ + + D +R+K R ++GP+C Sbjct: 118 ANLALVSVAGEYAAELAEQALDRSLNVMI-FSDNVTLDDEIRLKRRARDKGLLVMGPDCG 176 Query: 131 GILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP- 187 + ++ +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TAMIANTPLAFANVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDL 231 Query: 188 ---VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 V G + L++ ADE ++ + V + A + A + KP+V Sbjct: 232 SAEVGGISALTALDILSADEKSQVLAFVSKPPADAVRQHII----SAMKATGKPVVALFL 287 Query: 245 GKTAPPGR 252 G ++P R Sbjct: 288 GFSSPVAR 295 >gi|162452357|ref|YP_001614724.1| Acyl-activating enzyme [Sorangium cellulosum 'So ce 56'] gi|161162939|emb|CAN94244.1| Acyl-activating enzyme [Sorangium cellulosum 'So ce 56'] Length = 914 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 8/181 (4%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-----PVLDMVRVKARLEKSSSRLIG 126 + +V+ P + I E ++A +P + I+ G P + + R + R+IG Sbjct: 87 DLAVLVTPAASVPGLIGECVDAGVPGAIIISAGFKEMGPPGVQLERQIMERARGKMRIIG 146 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNC G++ P R G V +S+SG L + + QE +G S V +G Sbjct: 147 PNCLGVMNPIGGLNATFAKGQARPGKVAFISQSGALCTAVLDWSIQEQVGFSAFVSVGS- 205 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + + D+++ D T SI++ E G +A FL + KPI+ G+ Sbjct: 206 -MLDVGWGDLIDHLGNDPKTSSILIYMESIGDP-RDARAFLSAAREVALTKPIIVIKPGR 263 Query: 247 T 247 + Sbjct: 264 S 264 >gi|271963526|ref|YP_003337722.1| CoA-binding domain-containing protein [Streptosporangium roseum DSM 43021] gi|270506701|gb|ACZ84979.1| CoA-binding domain protein [Streptosporangium roseum DSM 43021] Length = 711 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 31/231 (13%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-----PVLDM 110 VP T+A+A A+ +++ VP +G ++ + IP + ++ G P L+ Sbjct: 291 VPAVPTLADAD----ADYALVAVP-AGRCAEVVRQADG-IPFVQVMSGGFGEAGAPELEA 344 Query: 111 VRVKARLEKSSSRLIGPNCPGILTPDSCK--IGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 V+A E + +RL+GPNC G+ +P + IG PG G V ++S+SG L E V Sbjct: 345 GLVRAARE-AGTRLLGPNCMGVYSPRGGQTFIGGEPGP---PGHVALISQSGGLAGEVVR 400 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE--IGGSAEEEAAQF 226 + GL S +G ++L DE T + M E GG A EA Sbjct: 401 VGERRGLAFSRVATVGNS--ADVTPAELLRWLATDEHTSVVGMYLEDPRGGRALFEALMS 458 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKE 277 + RGR P+V V G++A GR A A +GG G + A+ E Sbjct: 459 V-----RGR-LPVVLLVGGRSA-QGR---RAAASHTGGMVGDDRVWRALAE 499 >gi|239917819|ref|YP_002957377.1| acyl-CoA synthetase (NDP forming) [Micrococcus luteus NCTC 2665] gi|281413688|ref|ZP_06245430.1| acyl-CoA synthetase (NDP forming) [Micrococcus luteus NCTC 2665] gi|239839026|gb|ACS30823.1| acyl-CoA synthetase (NDP forming) [Micrococcus luteus NCTC 2665] Length = 909 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 29/204 (14%) Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV 113 V VP A E AA A + V SG DA E +EA+ R+ Sbjct: 267 VAVPADEVEALIPEAAAAGAQGLVVLTSGYADAGAEGLEAQ----------------RRL 310 Query: 114 KARLEKSSSRLIGPNCPGILTPD-SCKIGIMPG-SIFRKGSVGILSRSGTLTYEAVFQTS 171 + R+IGP G++ D + ++ P + ++G VG+ S+SG + Sbjct: 311 VSLARAHGMRVIGPASAGLVRTDPAIRLNASPSPGLAQRGPVGLFSQSGAVGAMVSAGVK 370 Query: 172 QEGLGQSTAVGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + G+G ST++ G V G D ++ F AD T ++ + E G+ +F + Sbjct: 371 RRGVGISTSISAGNRADVSGN---DAMQFFEADPHTAAVGVYLESFGNPR----KFSRIA 423 Query: 231 AKRGRKKPIV---GFVAGKTAPPG 251 + R KP+V V G+ PPG Sbjct: 424 RRLSRTKPVVVVRSDVTGRFLPPG 447 >gi|84060830|ref|YP_444032.1| putative oxidoreductase subunit [Escherichia coli] gi|83743410|gb|ABC42288.1| putative oxidoreductase subunit [Escherichia coli] Length = 450 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 43/196 (21%), Positives = 94/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ + +++ ++ + + D + +K Sbjct: 36 YATIASAKKHAPESNLAVISVNGLFAAREARQALQNNLNVML-FSDNVSLEDELELKHLA 94 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 95 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIIGASGTGSQELSVRIHEFGGGI 151 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + AD TE I ++ + A A+ + + A+ Sbjct: 152 SQLIGTGGRDMSEKIGGLMMLDAISMLEADPQTEIITLISKPPAPA---VARKVLERART 208 Query: 234 GRKKPIVGFVAGKTAP 249 K +V F+ ++ P Sbjct: 209 CHKPVVVCFLGRESTP 224 >gi|16763909|ref|NP_459524.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167990523|ref|ZP_02571623.1| protein FdrA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|16419039|gb|AAL19483.1| putative acyl-CoA synthetase, involved in protein transport [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205330989|gb|EDZ17753.1| protein FdrA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261245808|emb|CBG23606.1| putative acyl-CoA synthetase, involved in protein transport [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992251|gb|ACY87136.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157137|emb|CBW16621.1| FdrA protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911562|dbj|BAJ35536.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226111|gb|EFX51162.1| Protein fdrA [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323128849|gb|ADX16279.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332987478|gb|AEF06461.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 554 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 15/161 (9%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGI 155 ++ ++ + + D +R+K R ++GP+C + ++ +MP +G++G+ Sbjct: 144 VMIFSDNVTLDDEIRLKRRARDKGLLVMGPDCGTAMIANTPLAFANVMP-----EGNIGV 198 Query: 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVM 211 + SGT E Q + G G + A+G+GG V G + LE+ ADE ++ + Sbjct: 199 IGASGTGIQELCSQIALAGEGITHAIGLGGRDLSAEVGGISALTALEILSADEKSQVLAF 258 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + A + A + KP+V G ++P R Sbjct: 259 VSKPPADAVRQHII----AAMKAAGKPVVALFLGFSSPVAR 295 >gi|295836105|ref|ZP_06823038.1| GNAT family acetyltransferase [Streptomyces sp. SPB74] gi|295825867|gb|EFG64535.1| GNAT family acetyltransferase [Streptomyces sp. SPB74] Length = 698 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 20/195 (10%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVR 112 VP F TVAE E + +V+ VP +A+ E E + +V I+ G R Sbjct: 308 VPAFRTVAETGEDI--DLAVVVVPAERVPEAVAECGEHGVRGLVVISAGYGESVTAGRAR 365 Query: 113 VKARLEKSSS---RLIGPNCPGILTPDSC---KIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + + ++ S RL+GPN G++ D + P + +G VG+ ++SG + Sbjct: 366 QRRLVRQARSYGMRLVGPNAFGLVNTDPAVRLNASLAP-ELAPRGRVGLFTQSGAIGIAL 424 Query: 167 VFQTSQEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + + Q G G ST V G V G DVL+ + D T+ +M E G+ + Sbjct: 425 LSELHQRGTGLSTFVSAGNRADVSGN---DVLQYWYDDPGTDVALMYLESIGNPR----K 477 Query: 226 FLKDEAKRGRKKPIV 240 F + + KP+V Sbjct: 478 FTRLARRAAATKPLV 492 >gi|157382780|gb|ABV48827.1| ATP citrate lyase alpha subunit [Sulfurimonas autotrophica] Length = 325 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 8/115 (6%) Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAG--- 245 G+ FID L + + ++++GE+GG+ E + + K G+ KPI+ + G Sbjct: 4 GSVFIDNLLRMEKNPDVKYMILLGEVGGTEEYKVIE----AVKSGKITKPIIAWCIGTIA 59 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 K G GHAGA + + AE K AM EAGI + + + +++E+ L Sbjct: 60 KYYDSGVQFGHAGASANAERETAEAKNKAMAEAGIHVPATFNDLPATIMEVYDDL 114 >gi|116749894|ref|YP_846581.1| CoA-binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116698958|gb|ABK18146.1| CoA-binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 669 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 6/106 (5%) Query: 109 DMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++VRV + + RL+GPNC G+ P P + KG V ++S+SGT+ + Sbjct: 117 ELVRVASNYD---IRLVGPNCQGVNNPHHPMCASWP-LLTHKGRVAVISQSGTVGAAMMD 172 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 S E LG S+ V +G + +D++E F D T+ I + E Sbjct: 173 WFSVEELGVSSFVSLGNR--ADIDEVDLIEYFEGDPNTKVIAVYIE 216 >gi|256825408|ref|YP_003149368.1| acyl-CoA synthetase (NDP forming) [Kytococcus sedentarius DSM 20547] gi|256688801|gb|ACV06603.1| acyl-CoA synthetase (NDP forming) [Kytococcus sedentarius DSM 20547] Length = 831 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 123 RLIGPNCPGILTPDSCKIGIMP--GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPN G L+ S ++ + G+ +G G+ ++SG L Q G+G ST Sbjct: 324 RLVGPNSYG-LSNSSPEVSLNATLGAPSVRGRFGLFAQSGALGVSVTQMARQRGVGLSTF 382 Query: 181 VGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V G V G DV++ ++ D+ T ++ + E G+A +F + + KKPI Sbjct: 383 VSAGNRADVSGN---DVMQYWMEDDDTAAVGLYLETLGNAR----KFFRISQRLSAKKPI 435 Query: 240 VGFVAGKT---APPGRTMGHAGA 259 + +G + PPG + + A Sbjct: 436 IAIKSGTSGYGVPPGHLIRRSRA 458 >gi|161615266|ref|YP_001589231.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161364630|gb|ABX68398.1| hypothetical protein SPAB_03035 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 554 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 16/188 (8%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +++ V A + ++++ + +++ ++ + + D +R+K R ++GP+C Sbjct: 118 ANLALVSVAGEYAAELAEQALDRSLNVMI-FSDNVTLDDEIRLKRRARDKGLLVMGPDCG 176 Query: 131 GILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP- 187 + ++ +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TAMIANTPLAFANVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDL 231 Query: 188 ---VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 V G + L++ ADE ++ + V + A + A + KP+V Sbjct: 232 SAEVGGISALTALDILSADEKSQVLAFVSKPPADAVRQHII----AAMKATGKPVVALFL 287 Query: 245 GKTAPPGR 252 G ++P R Sbjct: 288 GFSSPVAR 295 >gi|284030093|ref|YP_003380024.1| CoA-binding domain-containing protein [Kribbella flavida DSM 17836] gi|283809386|gb|ADB31225.1| CoA-binding domain protein [Kribbella flavida DSM 17836] Length = 714 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 15/176 (8%) Query: 112 RVKARLEKSSSRLIGPNCPGILT-PDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 V A K R++GPN G P+S C P + +GSV + S+SG + + Sbjct: 366 EVVAIARKHGVRILGPNIYGYYYLPESLCATFCTPYDV--RGSVALSSQSGGIGMAILGF 423 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + +G S VG+G + D+L F D+ T I M E ++ F + Sbjct: 424 SRSSRMGVSAIVGVGNK--ADIDEDDLLTFFENDDNTNLIAMHLE----DLKDGRAFAET 477 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAP 284 ++ +KKP+V AG+TA R H GA+ G D I ++++G+ AP Sbjct: 478 ASRVSKKKPVVVLKAGRTAMGARAASSHTGAL--AGNDKVYDDI--LRQSGVVRAP 529 >gi|116749399|ref|YP_846086.1| CoA-binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116698463|gb|ABK17651.1| CoA-binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 712 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 25/189 (13%) Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPN 128 +I +PP A A++ES I IV ++ G + ++ A ++ RL+GPN Sbjct: 72 IIILPPPEALKAVMESARVGIKGIVIVSAGFKEVGGEGRKIEEQITAICREAGMRLVGPN 131 Query: 129 CPGILTP------DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 C G++ P ++ MP G + +S+SG L + + G S + Sbjct: 132 CLGVINPHPAVRLNASFSARMPAF----GEISFISQSGALCTAVLDFAADRDFGFSKFIS 187 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD--EAKRG-RKKPI 239 IG + +D+L F D+ TE I++ E A F+++ E G R PI Sbjct: 188 IGNK--ADVDELDLLRYFHKDKETEVIMIYLE----ELRRGADFIQEVREMTSGERPTPI 241 Query: 240 VGFVAGKTA 248 + +G+T+ Sbjct: 242 LVIKSGRTS 250 >gi|315231560|ref|YP_004071996.1| hypothetical protein TERMP_01798 [Thermococcus barophilus MP] gi|315184588|gb|ADT84773.1| hypothetical protein TERMP_01798 [Thermococcus barophilus MP] Length = 443 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 22/227 (9%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASV-IYVPPSGAGDAIIESIEAEIPLI 98 I+PK G +G E K+R V I P+ +IE I +I Sbjct: 43 INPKGGEVEVSGKRF---------EIKKRLDEKTDVAIIAIPAKLVPGLIEEIGDKIRGA 93 Query: 99 VCITEGIPVLDMVRVKARL-EKSSS---RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 V I+ G + + ++ L EK+ R+IGPNC GI G + +KG + Sbjct: 94 VVISAGFSEIGNMELERELVEKAREKGVRIIGPNCAGIFGVHGKFFGSFEVRV-KKGGLA 152 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++S+SG A+ ++EG+G S V G+ TE D L F D T++I + E Sbjct: 153 LISQSGAFGGAALAMGNEEGIGFSAFVSY-GNATDLTE-SDFLRYFADDRNTKAIALYIE 210 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAV 260 ++ +F+ KKP++ AGK+ R H G++ Sbjct: 211 ----GVKDGRKFIDALKYATPKKPVIILKAGKSRSGSRAAQSHTGSL 253 >gi|197248096|ref|YP_002145512.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197211799|gb|ACH49196.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 554 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 16/188 (8%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +++ V A + ++++ + +++ ++ + + D +R+K R ++GP+C Sbjct: 118 ANLALVSVAGEYAAELAEQALDRSLNVMI-FSDNVTLDDEIRLKRRARDKGLLVMGPDCG 176 Query: 131 GILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP- 187 + ++ +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TAMIANTPLAFANVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDL 231 Query: 188 ---VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 V G + L++ ADE ++ + V + A + A + KP+V Sbjct: 232 SAEVGGISALTALDILSADEKSQVLAFVSKPPADAVRQHII----AAMKATGKPVVALFL 287 Query: 245 GKTAPPGR 252 G ++P R Sbjct: 288 GFSSPVAR 295 >gi|317122311|ref|YP_004102314.1| protein FdrA [Thermaerobacter marianensis DSM 12885] gi|315592291|gb|ADU51587.1| protein FdrA [Thermaerobacter marianensis DSM 12885] Length = 675 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 8/148 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I VP A E+++ + + C ++ +P+ D +K R +GP+C Sbjct: 137 ANLALISVPGRFARWVAEEALDLGL-HVFCFSDNVPLADEAALKTRAASRGLLFMGPDC- 194 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG----D 186 G +G + R G V I++ SGT E Q + G G A+G GG D Sbjct: 195 GTAVVAGTGLGF--ANAVRPGPVSIVAASGTGLQEVACQLDRLGTGVRHAIGTGGRDLHD 252 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGE 214 V G F+ + D T IV + + Sbjct: 253 EVGGATFLAAIAALARDPGTRVIVALSK 280 >gi|154151162|ref|YP_001404780.1| CoA-binding domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153999714|gb|ABS56137.1| CoA-binding domain protein [Methanoregula boonei 6A8] Length = 694 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 25/220 (11%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL--------DMVRVKARLEKSSSR 123 +A VI +P +G + E+ + +IPL V ++ G + D V AR K R Sbjct: 297 DAVVIAIPAAGVPAIVEEAGKKKIPLAVIVSSGFREIGPAGKVLEDQVLAAAR--KYGIR 354 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPNC G + P R GS+ +S+SG + V + E +G S + + Sbjct: 355 VMGPNCLGFMLPAQGINTTFDPVSPRAGSIAFVSQSGAIITTIVDWSLPEEIGFSAVISV 414 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVM-VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 G F D + +D AT +I++ V EI + +FL ++ KP++ Sbjct: 415 GNQ--LDLTFEDFVAWTGSDPATNAIILYVEEI-----RDGRRFLDVVSRITPTKPVIVI 467 Query: 243 VAGKTAPPGRTMGHAGAVISGGK--GGAEDKINAMKEAGI 280 +G + +G A G G A + A +EAG+ Sbjct: 468 KSGSS-----EIGQKAASSHTGSLAGSAGVYLAAFREAGM 502 >gi|331666873|ref|ZP_08367747.1| protein FdrA [Escherichia coli TA271] gi|331066097|gb|EGI37981.1| protein FdrA [Escherichia coli TA271] Length = 550 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELTNQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDCG 176 Query: 131 GIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + TP + +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TSMIAGTPLAFA-NVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|281177508|dbj|BAI53838.1| conserved hypothetical protein [Escherichia coli SE15] Length = 515 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YGTIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAISMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|331645506|ref|ZP_08346610.1| putative oxidoreductase subunit [Escherichia coli M605] gi|330910128|gb|EGH38638.1| putative oxidoreductase subunit [Escherichia coli AA86] gi|331045668|gb|EGI17794.1| putative oxidoreductase subunit [Escherichia coli M605] Length = 515 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YGTIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAISMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|258510881|ref|YP_003184315.1| CoA-binding domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477607|gb|ACV57926.1| CoA-binding domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 637 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 25/221 (11%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKARLEKSSSRLI 125 + +V+ VP S I + I A I ++ ++ G +D + +L + RLI Sbjct: 69 DLAVLVVPASQVLSVIDDVIAAGIKHVMILSSGFSDMDKPGEELEREISEKLRAAGCRLI 128 Query: 126 GPNCPGILTPDS---CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 GPN G++ DS P + G V I S SG L + + GLG ++ V Sbjct: 129 GPNSLGLIQMDSETRLNASFAP-KVPEYGHVAIASHSGALGITILDYAAYIGLGVASFVS 187 Query: 183 IGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G V G D+L+ + D A E I++ E G+ F + + R+KPI+ Sbjct: 188 LGNRADVSGN---DLLQYWGDDPAIEMILLYLESFGNPR----NFSRLARRITRQKPILA 240 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAED-KINAM-KEAGI 280 + +T P G + +A V AED + AM ++AG+ Sbjct: 241 VKSART-PVGHDVANARTV----SVAAEDATVEAMFQQAGV 276 >gi|62179138|ref|YP_215555.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224582366|ref|YP_002636164.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62126771|gb|AAX64474.1| putative acyl-CoA synthetase, involved in protein transport [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224466893|gb|ACN44723.1| succinyl-CoA synthetase alpha subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322713600|gb|EFZ05171.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 554 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 16/188 (8%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +++ V A + ++++ + +++ ++ + + D +R+K R ++GP+C Sbjct: 118 ANLALVSVAGEYAAELAEQALDRSLNVMI-FSDNVTLDDEIRLKRRARDKGLLVMGPDCG 176 Query: 131 GILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP- 187 + ++ +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TAMIANTPLAFANVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDL 231 Query: 188 ---VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 V G + L++ ADE ++ + V + A + A + KP+V Sbjct: 232 SAEVGGISALTALDILSADEKSQVLAFVSKPPADAVRQHII----AAMKATGKPVVALFL 287 Query: 245 GKTAPPGR 252 G ++P R Sbjct: 288 GFSSPVAR 295 >gi|134046447|ref|YP_001097932.1| CoA-binding domain-containing protein [Methanococcus maripaludis C5] gi|132664072|gb|ABO35718.1| CoA-binding domain protein [Methanococcus maripaludis C5] Length = 702 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 16/198 (8%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP-----VLDMVRVKARLEKSSSRL 124 A + +I +P A DA+ E + + + IT G VL+ ++KA +++ R Sbjct: 68 APDLVIISIPAEYAVDAMEECGKKGVKSAIIITAGFAETNNHVLED-KLKAIIDQYGIRT 126 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPNC G++ + G++ +S+SG + + + LG S V +G Sbjct: 127 IGPNCLGVINLHNHLNASFSKEFSNMGNIAFISQSGAIMTALLDIANYYNLGFSKIVSMG 186 Query: 185 GD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V+ E ++ LE D T+ + + I G +E +F+ K RKKP++ Sbjct: 187 NKIDVQEYELLNYLE---NDPHTKVVALY--IEGLKDE---KFISAAKKISRKKPVIVLK 238 Query: 244 AGKTAPPGRTM-GHAGAV 260 +GK+ + H G++ Sbjct: 239 SGKSEEGAKAASSHTGSL 256 >gi|315300332|gb|EFU59568.1| bacterial FdrA protein [Escherichia coli MS 16-3] Length = 497 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 43/196 (21%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ + ++ ++ + + D + +K Sbjct: 83 YATIASAKKHAPESNLAVISVNGLFAAREARQALQNNLN-VMLFSDNVSLEDELELKHLA 141 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 142 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIIGASGTGSQELSVRIHEFGGGI 198 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + AD TE I ++ + A A+ + + A+ Sbjct: 199 SQLIGTGGRDMSEKIGGLMMLDAISMLEADPQTEIITLISKPPAPA---VARKVLERART 255 Query: 234 GRKKPIVGFVAGKTAP 249 K +V F+ ++ P Sbjct: 256 CHKPVVVCFLGRESTP 271 >gi|193067555|ref|ZP_03048522.1| bacterial FdrA protein [Escherichia coli E110019] gi|260853734|ref|YP_003227625.1| putative acyl-CoA synthetase [Escherichia coli O26:H11 str. 11368] gi|260866674|ref|YP_003233076.1| putative acyl-CoA synthetase [Escherichia coli O111:H- str. 11128] gi|300925791|ref|ZP_07141647.1| membrane protein FdrA [Escherichia coli MS 182-1] gi|301327836|ref|ZP_07221026.1| membrane protein FdrA [Escherichia coli MS 78-1] gi|192958967|gb|EDV89403.1| bacterial FdrA protein [Escherichia coli E110019] gi|257752383|dbj|BAI23885.1| predicted acyl-CoA synthetase [Escherichia coli O26:H11 str. 11368] gi|257763030|dbj|BAI34525.1| predicted acyl-CoA synthetase [Escherichia coli O111:H- str. 11128] gi|300418117|gb|EFK01428.1| membrane protein FdrA [Escherichia coli MS 182-1] gi|300845639|gb|EFK73399.1| membrane protein FdrA [Escherichia coli MS 78-1] gi|323153422|gb|EFZ39677.1| protein fdrA [Escherichia coli EPECa14] gi|323178209|gb|EFZ63787.1| protein fdrA [Escherichia coli 1180] Length = 555 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELTNQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDCG 176 Query: 131 GIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + TP + +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TSMIAGTPLAFA-NVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|170702027|ref|ZP_02892945.1| GCN5-related N-acetyltransferase [Burkholderia ambifaria IOP40-10] gi|170133064|gb|EDT01474.1| GCN5-related N-acetyltransferase [Burkholderia ambifaria IOP40-10] Length = 785 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 6/127 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+L+P P R G V +S+S LT + GLG S V Sbjct: 125 RIVGPGSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWAGARGLGFSHVVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + DVL+ +D T +I++ + +A +F+ R KP++ Sbjct: 185 LGSE--ADVDAGDVLDYLASDPGTRAILLELDTVCAAR----KFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAP 249 G+ P Sbjct: 239 RTGRADP 245 >gi|331651478|ref|ZP_08352498.1| protein FdrA [Escherichia coli M718] gi|331050751|gb|EGI22808.1| protein FdrA [Escherichia coli M718] Length = 555 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|158313833|ref|YP_001506341.1| CoA-binding domain-containing protein [Frankia sp. EAN1pec] gi|158109238|gb|ABW11435.1| CoA-binding domain protein [Frankia sp. EAN1pec] Length = 977 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 15/139 (10%) Query: 116 RLEKSSS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGS-----VGILSRSGTLTYEAVFQ 169 RL + S RLIGPN G++ D + + F G VG ++SG L + + Sbjct: 393 RLARESGMRLIGPNAMGVINTDPA---VRLHATFAAGDPPVGRVGAFTQSGALAGTFLTE 449 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 S+ +G ST V G DVL+ + +D T+ I++ + G+ +F + Sbjct: 450 ASRRAIGLSTFVSTGDR--SDVSANDVLQYWQSDPHTDVIMLHLQGFGNPR----KFARI 503 Query: 230 EAKRGRKKPIVGFVAGKTA 248 + GR+KP++ +G++A Sbjct: 504 ARRVGRRKPVIALKSGRSA 522 >gi|331676187|ref|ZP_08376899.1| protein FdrA [Escherichia coli H591] gi|331076245|gb|EGI47527.1| protein FdrA [Escherichia coli H591] Length = 555 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELTNQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDCG 176 Query: 131 GIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + TP + +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TSMIAGTPLAFA-NVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|303245359|ref|ZP_07331643.1| CoA-binding domain protein [Desulfovibrio fructosovorans JJ] gi|302493208|gb|EFL53070.1| CoA-binding domain protein [Desulfovibrio fructosovorans JJ] Length = 703 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 7/143 (4%) Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 K+ ++GPNC G+L+ +KGS+ S+SG L + E +G S Sbjct: 125 KNDIAMVGPNCLGLLSTHDDNNASFAAGYPKKGSIAFFSQSGALCTAILDWALGEEVGFS 184 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V +G V ++LE D T+ V++G I + A F++ AK R+KP Sbjct: 185 KFVSMGNMAVVNEA--NMLEYLRTDPNTK--VILGYIENVSN--GADFIEQAAKVCREKP 238 Query: 239 IVGFVAGKTAPPGRTM-GHAGAV 260 ++ +G T + H GA+ Sbjct: 239 VIMIKSGTTTAGAKAASSHTGAI 261 >gi|194437462|ref|ZP_03069559.1| bacterial FdrA protein [Escherichia coli 101-1] gi|300819543|ref|ZP_07099737.1| membrane protein FdrA [Escherichia coli MS 107-1] gi|300929121|ref|ZP_07144614.1| membrane protein FdrA [Escherichia coli MS 187-1] gi|194423631|gb|EDX39621.1| bacterial FdrA protein [Escherichia coli 101-1] gi|300462913|gb|EFK26406.1| membrane protein FdrA [Escherichia coli MS 187-1] gi|300527869|gb|EFK48931.1| membrane protein FdrA [Escherichia coli MS 107-1] gi|323963285|gb|EGB58849.1| FdrA protein [Escherichia coli H489] Length = 555 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|209917734|ref|YP_002291818.1| membrane protein FdrA [Escherichia coli SE11] gi|307314566|ref|ZP_07594168.1| FdrA family protein [Escherichia coli W] gi|209910993|dbj|BAG76067.1| conserved hypothetical protein [Escherichia coli SE11] gi|306905884|gb|EFN36407.1| FdrA family protein [Escherichia coli W] gi|315059792|gb|ADT74119.1| predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli W] gi|323184855|gb|EFZ70225.1| protein fdrA [Escherichia coli 1357] gi|323379640|gb|ADX51908.1| ATP-citrate lyase/succinyl-CoA ligase [Escherichia coli KO11] gi|323945182|gb|EGB41242.1| bacterial FdrA protein [Escherichia coli H120] gi|324019527|gb|EGB88746.1| membrane protein FdrA [Escherichia coli MS 117-3] gi|324116756|gb|EGC10670.1| FdrA protein [Escherichia coli E1167] Length = 555 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|91209396|ref|YP_539382.1| hypothetical protein UTI89_C0350 [Escherichia coli UTI89] gi|117622601|ref|YP_851514.1| acyl-CoA synthetase [Escherichia coli APEC O1] gi|218557246|ref|YP_002390159.1| enzyme with acyl-CoA domain [Escherichia coli S88] gi|237707681|ref|ZP_04538162.1| acyl-CoA synthetase [Escherichia sp. 3_2_53FAA] gi|91070970|gb|ABE05851.1| hypothetical protein YahF [Escherichia coli UTI89] gi|115511725|gb|ABI99799.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli APEC O1] gi|218364015|emb|CAR01680.1| putative enzyme with acyl-CoA domain [Escherichia coli S88] gi|226898891|gb|EEH85150.1| acyl-CoA synthetase [Escherichia sp. 3_2_53FAA] gi|294491061|gb|ADE89817.1| bacterial FdrA protein [Escherichia coli IHE3034] gi|307628195|gb|ADN72499.1| putative enzyme with acyl-CoA domain [Escherichia coli UM146] gi|323953052|gb|EGB48920.1| FdrA protein [Escherichia coli H252] gi|323958750|gb|EGB54451.1| FdrA protein [Escherichia coli H263] Length = 515 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 105/227 (46%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ +++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLNVML-FSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|221632598|ref|YP_002521819.1| protein fdrA [Thermomicrobium roseum DSM 5159] gi|221157036|gb|ACM06163.1| protein fdrA [Thermomicrobium roseum DSM 5159] Length = 514 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 16/168 (9%) Query: 91 IEAEIPL-----IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG 145 IEAE L + ++ +P+ + VR+K ++ L+GP+C G +G M Sbjct: 131 IEAEEALRADRHVFLFSDNVPIEEEVRLKELAQERGLLLMGPDC-GTAFIAGLGLGFM-- 187 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFL 201 + R+G +GI++ +GT + G G S +G GG V G + LE Sbjct: 188 NAVRRGPIGIVAAAGTGLQQLASLIDWFGSGISHGIGTGGRDLDARVGGRTMLAGLEALA 247 Query: 202 ADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP 249 D AT+ IV+V + A E A + L A G KP+V G+TAP Sbjct: 248 HDPATQVIVLVSK--PPAPEVAEKVLAFAAACG--KPVVATFIGQTAP 291 >gi|253745065|gb|EET01173.1| Acetyl-CoA synthetase [Giardia intestinalis ATCC 50581] Length = 715 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 24/192 (12%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL---------D 109 + ++ E E + +V+ +P A E + ++ +V IT G + D Sbjct: 58 YKSILEVPENV--DVAVVVIPSKAVLAAAKECAQKKVKSLVVITAGFKEIGGEGVQMEQD 115 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 +++V + + RL+GPNC GI+TP+ +C S KGS+ LS+SG + + Sbjct: 116 LIKV---CKDAGIRLVGPNCLGIVTPNLNCTFASAKPS---KGSIAFLSQSGAMLTSILD 169 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 G+G S + +G + +D++ D T+ I++ E + + +FL+ Sbjct: 170 WALTNGIGFSNFISLGNK--ADVDEVDLIMEVAEDPNTDIILLYLE----SIVDGRKFLE 223 Query: 229 DEAKRGRKKPIV 240 KKP++ Sbjct: 224 QIPTCVHKKPVI 235 >gi|11499522|ref|NP_070763.1| hypothetical protein AF1938 [Archaeoglobus fulgidus DSM 4304] gi|2648606|gb|AAB89317.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 673 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 20/157 (12%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDS---CKIGIMPGSIFRKGSVGILSRSGTL--TYEA 166 RV +K R+ GPN G+L ++ I P + +KG++GI++++G Sbjct: 329 RVLEIAKKHGIRIFGPNTTGVLNTENGFITSFAIQP--VIKKGNIGIIAQTGLFLGIMMD 386 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE--SIVMVGEIGGSAEEEAA 224 + ++ +G S VG+G E +VL+ L DE T+ I M G G A + A Sbjct: 387 IVTSNHPSIGFSKIVGMGNKI--DVEDYEVLDFLLKDEQTKVIGIYMEGIKNGRAFYDVA 444 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAV 260 +KPIV F +G+T + M H ++ Sbjct: 445 S--------SAEKPIVVFKSGRTEYGQKAAMSHTASI 473 >gi|218698883|ref|YP_002406512.1| membrane protein FdrA [Escherichia coli IAI39] gi|218368869|emb|CAR16619.1| putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli IAI39] Length = 555 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|307941775|ref|ZP_07657130.1| CoA-binding domain-containing protein [Roseibium sp. TrichSKD4] gi|307775383|gb|EFO34589.1| CoA-binding domain-containing protein [Roseibium sp. TrichSKD4] Length = 910 Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 11/143 (7%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RL GP G+ +P S ++ GS G + +SRSG + + Q G S+ V Sbjct: 126 RLTGPGSLGVASPGSNFNALLSGSDPEAGDIAFISRSGAILNATLSWAQQNKTGFSSVVS 185 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + D+++ F D T SIV+ E G SA +FL R KP++ Sbjct: 186 LGTR--LDVDIGDLIDYFAQDYKTRSIVLHME-GISAPR---KFLSAARAAARSKPVIVI 239 Query: 243 VAGK---TAPPGRTMGHAGAVIS 262 G+ T GRT HAG + S Sbjct: 240 RTGRSRDTFGSGRT--HAGKLAS 260 >gi|159487889|ref|XP_001701955.1| ATP citrate lyase, subunit B [Chlamydomonas reinhardtii] gi|158281174|gb|EDP06930.1| ATP citrate lyase, subunit B [Chlamydomonas reinhardtii] Length = 534 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 46/211 (21%) Query: 48 YWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGI 105 ++ + +PV+ ++AEA ++ A+ + Y A ++ ++++ A + +I I EG+ Sbjct: 55 FFGKNEIAIPVYGSIAEATRKHPKADVFINYASFRSAYESSLQALNSATLRVIAIIAEGV 114 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGS--------IFRKGSVGILS 157 P D + A ++ +IGP G + + KIG G+ + R GSVG +S Sbjct: 115 PEKDTKHLIAVARANNKVIIGPATVGGVQAGAFKIGDTAGTLDNIVACKLHRPGSVGFVS 174 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG ++ E++ A + IV++GE+GG Sbjct: 175 KSGGMSN---------------------------------EMYNHIPAIKMIVVLGELGG 201 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 + E + +K A KP+V +V+G A Sbjct: 202 ADEYGLVEAIKAGAV---TKPVVAWVSGTCA 229 >gi|157159355|ref|YP_001461705.1| membrane protein FdrA [Escherichia coli E24377A] gi|157081385|gb|ABV21093.1| bacterial FdrA protein [Escherichia coli E24377A] Length = 555 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|323191444|gb|EFZ76706.1| bacterial FdrA family protein [Escherichia coli RN587/1] Length = 515 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGAV---LCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|219850672|ref|YP_002465105.1| acetyl coenzyme A synthetase (ADP forming), alpha domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219544931|gb|ACL26669.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Chloroflexus aggregans DSM 9485] Length = 696 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 15/218 (6%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL-----DMVR-VKARLEKSSSRLI 125 + +VI +PP A+ E + +V IT G + D+ R + A + + R++ Sbjct: 67 DLAVIVIPPQHVNAAVEECGRKGVRGLVVITAGFKEVGGAGRDLERELLAIVRRYGMRMV 126 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 GPN GI+ S S+ G++ ++S+SG + + + Q+G+G S V +G Sbjct: 127 GPNSLGIIDTISRLNASFASSMPLPGNIALMSQSGAICAAILDWSQQQGIGFSRFVSLGN 186 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 + + +LE + DE ++ I+ E A ++ F++ + + P+V +G Sbjct: 187 K--ADVDEVALLEAWNHDEHSKVILAYLE----AIDDGPNFIRVAREVTKTTPVVAIKSG 240 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 TA R ++G + E A ++GI A Sbjct: 241 TTAAGTRAASSHTGSLAGSERAYE---AAFAQSGILRA 275 >gi|256020489|ref|ZP_05434354.1| membrane protein FdrA [Shigella sp. D9] gi|332281669|ref|ZP_08394082.1| acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain-containing protein [Shigella sp. D9] gi|332104021|gb|EGJ07367.1| acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain-containing protein [Shigella sp. D9] Length = 555 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|88602746|ref|YP_502924.1| CoA-binding [Methanospirillum hungatei JF-1] gi|88188208|gb|ABD41205.1| CoA-binding protein [Methanospirillum hungatei JF-1] Length = 687 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 54/239 (22%), Positives = 104/239 (43%), Gaps = 23/239 (9%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCIT--------EGIPV 107 +PV+ T+++ E V+ +P + I E+ + + V +T EG + Sbjct: 283 IPVYKTLSDIPE--PVEMVVVAIPAPKVPEIIHEAGSRGVKVAVILTAGFRETGEEGKKI 340 Query: 108 LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 D + AR ++ R++GPNC GI+ P G +G +S+SG + + Sbjct: 341 EDELLRVAR--ETGIRIVGPNCLGIIIPPLELNATFDVQSPLSGQIGFISQSGAIITTVL 398 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM-VGEIGGSAEEEAAQF 226 + +G S+ + +G G F++ L++ D T +I++ V EI + +F Sbjct: 399 DWSISRRIGFSSVISVGNQSDMG--FMEYLQVLDQDPTTYAIILYVEEI-----RDGREF 451 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 ++ A +KP++ +G + R A + G E I A +++G+ A S Sbjct: 452 IRYAATMRGRKPVIALKSGSSV---RGQEAASSHTGSLAGSFETYIAAFRQSGVIPAYS 507 >gi|323969026|gb|EGB64338.1| FdrA protein [Escherichia coli TA007] Length = 515 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 43/196 (21%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ + ++ ++ + + D + +K Sbjct: 101 YATIASAKKHAPESNLAVISVNGLFAAREARQALQNNLN-VMLFSDNVSLEDELELKHLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIIGASGTGSQELSVRIHEFGGGI 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + AD TE I ++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDMSEKIGGLMMLDAISMLEADPQTEIITLISKPPAPA---VARKVLERART 273 Query: 234 GRKKPIVGFVAGKTAP 249 K +V F+ ++ P Sbjct: 274 CHKPVVVCFLGRESTP 289 >gi|256375606|ref|YP_003099266.1| CoA-binding domain protein [Actinosynnema mirum DSM 43827] gi|255919909|gb|ACU35420.1| CoA-binding domain protein [Actinosynnema mirum DSM 43827] Length = 902 Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 10/129 (7%) Query: 123 RLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R++GPN G++ PD + ++ +G G +SG L + ++ GLG ST Sbjct: 316 RVVGPNALGVVNTDPDVRLNATLAPTLPARGRTGFFCQSGALGSAILATAAERGLGLSTF 375 Query: 181 VGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V G V G D+L+ + D AT+ +++ E G+ +F + + GR KPI Sbjct: 376 VSAGNRADVSGN---DLLQYWETDPATDVVLLYLESFGNPR----KFARLARRLGRSKPI 428 Query: 240 VGFVAGKTA 248 V +G+ A Sbjct: 429 VAVKSGRHA 437 >gi|253774494|ref|YP_003037325.1| membrane protein FdrA [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160586|ref|YP_003043694.1| membrane protein FdrA [Escherichia coli B str. REL606] gi|297517212|ref|ZP_06935598.1| membrane protein FdrA [Escherichia coli OP50] gi|242376297|emb|CAQ30990.1| involved in protein transport; multicopy suppressor of dominant negative ftsH mutants [Escherichia coli BL21(DE3)] gi|253325538|gb|ACT30140.1| FdrA family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972487|gb|ACT38158.1| membrane protein FdrA [Escherichia coli B str. REL606] gi|253976697|gb|ACT42367.1| membrane protein FdrA [Escherichia coli BL21(DE3)] Length = 555 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|293413776|ref|ZP_06656425.1| FdrA protein [Escherichia coli B185] gi|291433834|gb|EFF06807.1| FdrA protein [Escherichia coli B185] Length = 555 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDCG 176 Query: 131 GIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + TP + +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TSMIAGTPLAFA-NVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|253990662|ref|YP_003042018.1| hypothetical protein PAU_03188 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782112|emb|CAQ85276.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 880 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 10/140 (7%) Query: 118 EKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ S RL+GPN G+L P P I KG + +S+S ++ + G+G Sbjct: 115 QRYSIRLLGPNSLGLLAPWQGLNASFSPVPIL-KGKLAFISQSAAVSNTILDWAQHRGVG 173 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLA-DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 S + + GD V ID L FLA D T +I++ E +A +FL R Sbjct: 174 FSYFIAL-GDSVDID--IDHLLDFLARDSKTSAILLYLE----HIHDARRFLSASRSASR 226 Query: 236 KKPIVGFVAGKTAPPGRTMG 255 KPI+ +G+T + +G Sbjct: 227 NKPILVVKSGRTKQAQKLLG 246 >gi|332098521|gb|EGJ03487.1| protein fdrA domain protein [Shigella boydii 3594-74] Length = 264 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 14/151 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + +++E + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALERNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDCG 176 Query: 131 GIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG--- 184 + TP + +MP +G++G++ SGT E Q +Q G G + A+G+G Sbjct: 177 TSMIAGTPLAFA-NVMP-----EGNIGVIGASGTGIQELCSQIAQAGEGITHAIGLGERD 230 Query: 185 -GDPVKGTEFIDVLELFLADEATESIVMVGE 214 V G + LE+ ADE +E + V + Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK 261 >gi|312964646|ref|ZP_07778897.1| bacterial FdrA family protein [Escherichia coli 2362-75] gi|312290667|gb|EFR18545.1| bacterial FdrA family protein [Escherichia coli 2362-75] Length = 515 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGT---ALCFGNAVRRGNIGIVGASGTGSQELSVRIYEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|15800255|ref|NP_286267.1| membrane protein FdrA [Escherichia coli O157:H7 EDL933] gi|15829834|ref|NP_308607.1| membrane protein FdrA [Escherichia coli O157:H7 str. Sakai] gi|168747798|ref|ZP_02772820.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4113] gi|168754632|ref|ZP_02779639.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4401] gi|168760318|ref|ZP_02785325.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4501] gi|168768481|ref|ZP_02793488.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4486] gi|168774594|ref|ZP_02799601.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4196] gi|168779021|ref|ZP_02804028.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4076] gi|168786379|ref|ZP_02811386.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC869] gi|195936085|ref|ZP_03081467.1| membrane protein FdrA [Escherichia coli O157:H7 str. EC4024] gi|208808061|ref|ZP_03250398.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4206] gi|208815194|ref|ZP_03256373.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4045] gi|208823159|ref|ZP_03263477.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4042] gi|209396962|ref|YP_002269171.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4115] gi|217325292|ref|ZP_03441376.1| bacterial FdrA protein [Escherichia coli O157:H7 str. TW14588] gi|254791706|ref|YP_003076543.1| membrane protein FdrA [Escherichia coli O157:H7 str. TW14359] gi|261224006|ref|ZP_05938287.1| predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli O157:H7 str. FRIK2000] gi|261257700|ref|ZP_05950233.1| predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli O157:H7 str. FRIK966] gi|291281429|ref|YP_003498247.1| Bacterial FdrA protein [Escherichia coli O55:H7 str. CB9615] gi|12513415|gb|AAG54875.1|AE005233_1 involved in protein transport; multicopy suppressor of dominant negative ftsH mutants [Escherichia coli O157:H7 str. EDL933] gi|13360038|dbj|BAB34003.1| multicopy suppressor fdrA [Escherichia coli O157:H7 str. Sakai] gi|187769774|gb|EDU33618.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4196] gi|188017663|gb|EDU55785.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4113] gi|189002702|gb|EDU71688.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4076] gi|189358088|gb|EDU76507.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4401] gi|189362472|gb|EDU80891.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4486] gi|189369184|gb|EDU87600.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4501] gi|189373768|gb|EDU92184.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC869] gi|208727862|gb|EDZ77463.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4206] gi|208731842|gb|EDZ80530.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4045] gi|208737352|gb|EDZ85036.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4042] gi|209158362|gb|ACI35795.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4115] gi|217321513|gb|EEC29937.1| bacterial FdrA protein [Escherichia coli O157:H7 str. TW14588] gi|254591106|gb|ACT70467.1| predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli O157:H7 str. TW14359] gi|290761302|gb|ADD55263.1| Bacterial FdrA protein [Escherichia coli O55:H7 str. CB9615] gi|320192943|gb|EFW67583.1| Protein fdrA [Escherichia coli O157:H7 str. EC1212] gi|320638297|gb|EFX08022.1| membrane protein FdrA [Escherichia coli O157:H7 str. G5101] gi|320643701|gb|EFX12831.1| membrane protein FdrA [Escherichia coli O157:H- str. 493-89] gi|320649017|gb|EFX17604.1| membrane protein FdrA [Escherichia coli O157:H- str. H 2687] gi|320660381|gb|EFX27852.1| membrane protein FdrA [Escherichia coli O55:H7 str. USDA 5905] gi|320665075|gb|EFX32172.1| membrane protein FdrA [Escherichia coli O157:H7 str. LSU-61] gi|326341291|gb|EGD65083.1| Protein fdrA [Escherichia coli O157:H7 str. 1044] Length = 555 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDCG 176 Query: 131 GIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + TP + +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TSMIAGTPLAFA-NVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|331671878|ref|ZP_08372674.1| putative oxidoreductase subunit [Escherichia coli TA280] gi|331070867|gb|EGI42226.1| putative oxidoreductase subunit [Escherichia coli TA280] Length = 515 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + L+GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLLMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|126665000|ref|ZP_01735983.1| predicted Acetyl-CoA synthetase [Marinobacter sp. ELB17] gi|126630370|gb|EBA00985.1| predicted Acetyl-CoA synthetase [Marinobacter sp. ELB17] Length = 714 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 13/167 (7%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG-LG 176 +K++ R++GPN G+ K+ ++ + G +GI+S+SG + + G +G Sbjct: 122 QKANVRIVGPNTSGVFNLHK-KVNLLALDNVKPGDIGIISQSGNMLLALALEAESNGHVG 180 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST VG G G F D L+ DE T + E ++ FL + + Sbjct: 181 FSTYVGPGNQIDLG--FADYLQYLGEDENTRVATLYVE----GFKDGRVFLNVAKEIAKT 234 Query: 237 KPIVGFVAGKT-APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 KP+V + +G T A H GA+ G ++ +++ G+ + Sbjct: 235 KPVVVYKSGSTEAGQKAAKSHTGAL----AGSYAMTVDLLRQVGVTV 277 >gi|300937783|ref|ZP_07152581.1| bacterial FdrA protein [Escherichia coli MS 21-1] gi|300457224|gb|EFK20717.1| bacterial FdrA protein [Escherichia coli MS 21-1] Length = 515 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + L+GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLLMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|284044272|ref|YP_003394612.1| CoA-binding protein [Conexibacter woesei DSM 14684] gi|283948493|gb|ADB51237.1| CoA-binding domain protein [Conexibacter woesei DSM 14684] Length = 744 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 10/110 (9%) Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDS-CKIGIMPG-SIFRKGSVGILSRSGTLTY 164 +LD+ R + RL+GPN G L P + +PG + G + I+++SG + + Sbjct: 114 LLDVAR------SAEIRLLGPNTSGFLDPAARLHATFVPGVAAIAPGPLAIVAQSGGVNH 167 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 + F EG+G A+G+G + DVL+ D T ++V+ E Sbjct: 168 QLAFAAQAEGIGVRLAIGLGN--AADVDVPDVLDQLADDAETGAVVLALE 215 >gi|293418585|ref|ZP_06661020.1| FdrA protein [Escherichia coli B088] gi|291325113|gb|EFE64528.1| FdrA protein [Escherichia coli B088] Length = 555 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDCG 176 Query: 131 GIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + TP + +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TSMIAGTPLAFA-NVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|242398199|ref|YP_002993623.1| Acyl-CoA synthetase, subunit alpha [Thermococcus sibiricus MM 739] gi|242264592|gb|ACS89274.1| Acyl-CoA synthetase, subunit alpha [Thermococcus sibiricus MM 739] Length = 473 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 61/129 (47%), Gaps = 10/129 (7%) Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIF---RKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R+IGPNC G+ PD+ +P + GS+ +++SG + + G+G Sbjct: 136 RIIGPNCVGVYVPDTGVDTVFLPDEKMDRPKSGSIAFVTQSGAFAAAMLDWAAGAGIGIG 195 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V G + D+++ F+ DE+ +++ + E +E +F++ + + KP Sbjct: 196 KMVSYGNK--LDVDDADLMDYFIYDESIKAVTLYIE----GVKEGRKFIEAAKRITKVKP 249 Query: 239 IVGFVAGKT 247 ++ +GKT Sbjct: 250 VIALKSGKT 258 >gi|323170652|gb|EFZ56302.1| protein fdrA [Escherichia coli LT-68] Length = 555 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDCG 176 Query: 131 GIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + TP + +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TSMIAGTPLAFA-NVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|215485431|ref|YP_002327862.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli O127:H6 str. E2348/69] gi|215263503|emb|CAS07830.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli O127:H6 str. E2348/69] Length = 515 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGT---ALCFGNAVRRGNIGIVGASGTGSQELSVRIYEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|85059888|ref|YP_455590.1| hypothetical protein SG1910 [Sodalis glossinidius str. 'morsitans'] gi|84780408|dbj|BAE75185.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 885 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 16/161 (9%) Query: 113 VKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 ++A ++ RL+GPN G+L P P I R G + +S+S ++ + Sbjct: 110 LRACAQRFGMRLLGPNSLGLLAPWQDLNASFSPVPIHR-GKLAFISQSAAVSNTVLDWAQ 168 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 Q G S + + GD + ++D + FLA + S +++ S +A +FL Sbjct: 169 QRATGFSYFIAL-GDSID--IYVDDMLDFLARDGKTSAILLHLEHLS---DARRFLSAAR 222 Query: 232 KRGRKKPIVGFVAGKT--------APPGRTMGHAGAVISGG 264 R KPI+ +G+T PPGR + A+ G Sbjct: 223 GAARNKPILVIKSGRTIQAQRLLNYPPGRDAAYDAAIQRAG 263 >gi|301019972|ref|ZP_07184106.1| bacterial FdrA protein [Escherichia coli MS 69-1] gi|300399002|gb|EFJ82540.1| bacterial FdrA protein [Escherichia coli MS 69-1] Length = 515 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|315171539|gb|EFU15556.1| putative membrane protein FdrA [Enterococcus faecalis TX1342] Length = 515 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ IG+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GIGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ +ADE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|315033645|gb|EFT45577.1| putative membrane protein FdrA [Enterococcus faecalis TX0017] Length = 519 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ IG+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIING----IGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ +ADE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|115755966|ref|XP_001200828.1| PREDICTED: similar to ATP-citrate synthase, partial [Strongylocentrotus purpuratus] gi|115933715|ref|XP_792914.2| PREDICTED: similar to ATP-citrate synthase, partial [Strongylocentrotus purpuratus] Length = 288 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTA 248 GT F+D + + D + +VM+GE+GG+ E E ++ GR KP+V + G + Sbjct: 3 GTTFLDHILRYHDDPEVKMLVMLGEVGGTEEYEVCSAIES----GRITKPMVAWCIGTCS 58 Query: 249 PPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 + GHAGA +G + + K A++ AG + S +G + E+ L Sbjct: 59 TMFTSEVQFGHAGACANGERETSSAKNQALRVAGAYVPGSFDDLGDKIAEIFQGL 113 >gi|238911341|ref|ZP_04655178.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 554 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 87/186 (46%), Gaps = 12/186 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +++ V A + ++++ + +++ ++ + + D +R+K R ++GP+C Sbjct: 118 ANLALVSVAGEYAAELAEQALDRSLNVMI-FSDNVTLDDEIRLKRRARDKGLLVMGPDCG 176 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP--- 187 + ++ + ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TAMIANT---PLAFANVIPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSA 233 Query: 188 -VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 V G + L++ ADE ++ + V + A + A + KP+V G Sbjct: 234 EVGGISALTALDILSADEKSQVLAFVSKPPADAVRQHII----AAMKATGKPVVALFLGF 289 Query: 247 TAPPGR 252 ++P R Sbjct: 290 SSPVAR 295 >gi|237729817|ref|ZP_04560298.1| FdrA family protein [Citrobacter sp. 30_2] gi|226908423|gb|EEH94341.1| FdrA family protein [Citrobacter sp. 30_2] Length = 515 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 13/214 (6%) Query: 47 TYWTGGNVNVPVFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI 105 T+ G + + T+A AK+ +N +VI V A ++++ + +++ ++ + Sbjct: 89 THKEQGGQHESRYATLASAKKHVPESNLAVISVNGLFAAREARQALQNNLNVML-FSDNV 147 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 + D + +K + ++GP+C + + + G+ R+G++GI+ SGT + E Sbjct: 148 SLEDELALKQLAHEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIIGASGTGSQE 204 Query: 166 AVFQTSQEGLGQSTAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 + + G G S +G GG + + G +D + + AD TE I ++ + A Sbjct: 205 LSVRIHEFGGGISQLIGTGGRDLSEKIGGLMMLDAIGMLEADPQTEIIALISKPPAPA-- 262 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 A + L E R KP+V G+ A P G Sbjct: 263 VARKVL--ERARACHKPVVVCFLGREAAPADEKG 294 >gi|300903418|ref|ZP_07121345.1| bacterial FdrA protein [Escherichia coli MS 84-1] gi|300923786|ref|ZP_07139808.1| bacterial FdrA protein [Escherichia coli MS 182-1] gi|301301465|ref|ZP_07207600.1| bacterial FdrA protein [Escherichia coli MS 124-1] gi|301325026|ref|ZP_07218573.1| bacterial FdrA protein [Escherichia coli MS 78-1] gi|300404560|gb|EFJ88098.1| bacterial FdrA protein [Escherichia coli MS 84-1] gi|300419942|gb|EFK03253.1| bacterial FdrA protein [Escherichia coli MS 182-1] gi|300842962|gb|EFK70722.1| bacterial FdrA protein [Escherichia coli MS 124-1] gi|300848074|gb|EFK75834.1| bacterial FdrA protein [Escherichia coli MS 78-1] gi|315256141|gb|EFU36109.1| bacterial FdrA protein [Escherichia coli MS 85-1] gi|324117045|gb|EGC10957.1| FdrA protein [Escherichia coli E1167] Length = 515 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|255513334|gb|EET89600.1| CoA-binding domain protein [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 479 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 58/250 (23%), Positives = 101/250 (40%), Gaps = 19/250 (7%) Query: 31 YCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIES 90 Y G ++P + +G + + + + E K+ + +VI +P + I E Sbjct: 52 YLDVGYSGKLYPVNANA--SGKILGLESYRNITEIKK--PIDLAVIAIPAKFTSELITEC 107 Query: 91 IEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGPNCPGILTPDS-CKIGIMPG 145 +A + IV ++ G + V+++ L K L+GPNC G++ S +P Sbjct: 108 HKAGVKSIVVVSSGYAEIGEVKLEQELIDLANKYKIPLLGPNCLGVMDLKSRVDTLFLPT 167 Query: 146 SIFRKGSVG---ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA 202 + S+G +S+SG + + + EG G S + G V + D+L Sbjct: 168 FKIDRPSIGGVSFVSQSGAVGSSTLDIIANEGFGLSKFISYGNASV--IDETDILNYLAK 225 Query: 203 DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 DE T+ I+ E + F++ K KKPIV G+T G H+ Sbjct: 226 DEDTKVILYYIE----GVKRGRAFIEAAKKATLKKPIVVLKGGRT-EAGSKAAHSHTASL 280 Query: 263 GGKGGAEDKI 272 G A D + Sbjct: 281 AGSYEAYDAV 290 >gi|284161406|ref|YP_003400029.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Archaeoglobus profundus DSM 5631] gi|284011403|gb|ADB57356.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Archaeoglobus profundus DSM 5631] Length = 663 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 13/169 (7%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +K +++GPNC GI+ + G +G + ++S+SG L + +G Sbjct: 114 KKYGIKMVGPNCLGIINTSNGLNATFSGVEPLRGRIALISQSGALIVAIMDWALANNIGF 173 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V +G + D +E D+ TE I + E EE +F+ E +K Sbjct: 174 SKIVSLGNKALLNE--CDFIEYLSNDDETEVIALYVE----GIEEGRRFM--EIAEKCRK 225 Query: 238 PIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 PIV +GKT+ + + H G++ G E A +++G+ A S Sbjct: 226 PIVAIKSGKTSAGAKAVSSHTGSL----AGSYEACRTAFRQSGVVEAES 270 >gi|167550940|ref|ZP_02344696.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205324292|gb|EDZ12131.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 554 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 87/186 (46%), Gaps = 12/186 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +++ V A + ++++ + +++ ++ + + D +R+K R ++GP+C Sbjct: 118 ANLALVSVAGEYAAELAEQALDRSLNVMI-FSDNVTLDDEIRLKRRARDKGLLVMGPDCG 176 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP--- 187 + ++ + ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TAMIANT---PLAFANVIPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSA 233 Query: 188 -VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 V G + L++ ADE ++ + V + A + A + KP+V G Sbjct: 234 EVGGISALTALDILSADEKSQVLAFVSKPPADAVRQHII----AAMKATGKPVVALFLGF 289 Query: 247 TAPPGR 252 ++P R Sbjct: 290 SSPVAR 295 >gi|301022861|ref|ZP_07186695.1| membrane protein FdrA [Escherichia coli MS 196-1] gi|299881054|gb|EFI89265.1| membrane protein FdrA [Escherichia coli MS 196-1] Length = 555 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDCG 176 Query: 131 GIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + TP + +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TSMIAGTPLAFA-NVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|16128502|ref|NP_415051.1| multicopy suppressor of dominant negative ftsH mutations; predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli str. K-12 substr. MG1655] gi|89107386|ref|AP_001166.1| predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli str. K-12 substr. W3110] gi|170080101|ref|YP_001729421.1| acyl-CoA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|238899800|ref|YP_002925596.1| putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli BW2952] gi|2498376|sp|Q47208|FDRA_ECOLI RecName: Full=Protein fdrA gi|565641|dbj|BAA07638.1| FdrA protein [Escherichia coli] gi|1773198|gb|AAB40270.1| fdrA [Escherichia coli] gi|1786729|gb|AAC73620.1| multicopy suppressor of dominant negative ftsH mutations; predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli str. K-12 substr. MG1655] gi|85674656|dbj|BAE76296.1| predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli str. K12 substr. W3110] gi|169887936|gb|ACB01643.1| predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli str. K-12 substr. DH10B] gi|238862120|gb|ACR64118.1| predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli BW2952] gi|260450299|gb|ACX40721.1| FdrA family protein [Escherichia coli DH1] gi|315135199|dbj|BAJ42358.1| membrane protein FdrA [Escherichia coli DH1] Length = 555 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDCG 176 Query: 131 GIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + TP + +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TSMIAGTPLAFA-NVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|315169216|gb|EFU13233.1| putative membrane protein FdrA [Enterococcus faecalis TX1341] Length = 519 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ IG+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GIGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ +ADE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|146342157|ref|YP_001207205.1| hypothetical protein BRADO5307 [Bradyrhizobium sp. ORS278] gi|146194963|emb|CAL78988.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278] Length = 897 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 11/165 (6%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +K RL+GPNC GI+ P + G++ ++S+SG + V +Q G+G Sbjct: 120 QKHGMRLVGPNCLGIMMPTIKLNASFSAHMPVAGNLALISQSGAIAAGMVDWAAQRGVGF 179 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V IG + D+L+ F D T +I++ E A ++A +F+ R K Sbjct: 180 SGIVSIGD--QLDVDLADLLDHFALDGGTRAILLYIE----AVKDARKFMSAARAAARVK 233 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGIC 281 P+V +G+ G A A +G GA+ A + AG+ Sbjct: 234 PVVVVKSGR----GAVGAKAAATHTGALAGADAVYEAAFRRAGVL 274 >gi|121610426|ref|YP_998233.1| CoA-binding domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121555066|gb|ABM59215.1| CoA-binding domain protein [Verminephrobacter eiseniae EF01-2] Length = 711 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 19/184 (10%) Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP------V 107 + +P + T+ + A + +++ VP AI + +E E+ +CIT G Sbjct: 68 MGLPAYRTLPDCP--AAVDLAILLVPREHVYAAIEDCVEKEVGCALCITAGFAETGPKGC 125 Query: 108 LDMVRVKARLEKSSSRLIGPNCPGILTPDS---CKIGIMPGSI--FRKGSVGILSRSGTL 162 D + A RLIGPNC G++ ++ G I G +G+ S+SG L Sbjct: 126 ADEQALVALARAGGVRLIGPNCMGLMNTHHRLCATTAVVMGGIDTLPAGGIGLASQSGAL 185 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 + + G G S+ + +G + D E + D T+ + + E A ++ Sbjct: 186 MGAMISRGVDIGTGFSSTISVGNQ--SDLDLNDFFEYLIDDPMTDVVCLYME----AVKD 239 Query: 223 AAQF 226 A +F Sbjct: 240 APRF 243 >gi|34499131|ref|NP_903346.1| acetyl-CoA synthetase [Chromobacterium violaceum ATCC 12472] gi|34104982|gb|AAQ61338.1| probable acetyl-CoA synthetase [Chromobacterium violaceum ATCC 12472] Length = 891 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 8/145 (5%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPN G++ P + R G++ ++S S L + + +G S+ + Sbjct: 127 RILGPNVLGLMRPVAGFNASNYSGKVRPGNLALVSESSALCAAMLDWADSKEIGFSSVIS 186 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVM-VGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +GG G F ++L+ +AD AT+ I++ V I +A +F+ R KP+V Sbjct: 187 LGGALDVG--FGEILDYLVADNATQGILLHVHHI-----HDARRFMSALRAAARTKPVVV 239 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKG 266 +G+ + HA +++ G Sbjct: 240 IKSGRFENDASGLTHASNLVASGDA 264 >gi|37525239|ref|NP_928583.1| hypothetical protein plu1272 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784666|emb|CAE13566.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 880 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 10/152 (6%) Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTY 164 P +K + S RL+GPN G+L P P I KG + +S+S ++ Sbjct: 103 PTSQFAELKQCCQHYSIRLLGPNSLGVLAPWQGLNASFSPVPIL-KGKLAFISQSAAVSN 161 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA-DEATESIVMVGEIGGSAEEEA 223 + G+G S + + GD V ID L FLA D T +I++ E +A Sbjct: 162 TILDWAKHRGVGFSYFIAL-GDSVDID--IDHLLDFLARDSKTSAILLYLE----HIHDA 214 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +FL R KPI+ +G+T + +G Sbjct: 215 RRFLSASRSASRNKPILVVKSGRTKRAQKLLG 246 >gi|300949215|ref|ZP_07163248.1| membrane protein FdrA [Escherichia coli MS 116-1] gi|300954336|ref|ZP_07166794.1| membrane protein FdrA [Escherichia coli MS 175-1] gi|300318673|gb|EFJ68457.1| membrane protein FdrA [Escherichia coli MS 175-1] gi|300451333|gb|EFK14953.1| membrane protein FdrA [Escherichia coli MS 116-1] gi|323943137|gb|EGB39294.1| FdrA protein [Escherichia coli E482] Length = 555 Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDCG 176 Query: 131 GIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + TP + +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TSMIAGTPLAFA-NVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|168798092|ref|ZP_02823099.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC508] gi|189379310|gb|EDU97726.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC508] Length = 555 Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDCG 176 Query: 131 GIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + TP + +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TSMIAGTPLAFA-NVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PLAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|46447204|ref|YP_008569.1| hypothetical protein pc1570 [Candidatus Protochlamydia amoebophila UWE25] gi|46400845|emb|CAF24294.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 920 Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 10/125 (8%) Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 +IGPNC GI+ P + + G + +S+SG + + + QE +G S+ V I Sbjct: 146 IIGPNCLGIMNPHTGLNASFAKGLALPGQLAFISQSGAMCTAVLDWSWQEKVGFSSFVSI 205 Query: 184 G--GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G D GT +++ F +D T S+++ E G +A F+ + +KPI+ Sbjct: 206 GSMADVNWGT----LIDYFGSDPHTSSLLLYMETIG----DARSFMTAAREVALEKPIIV 257 Query: 242 FVAGK 246 AG+ Sbjct: 258 IKAGR 262 >gi|218693981|ref|YP_002401648.1| membrane protein FdrA [Escherichia coli 55989] gi|218350713|emb|CAU96405.1| putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli 55989] Length = 555 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDCG 176 Query: 131 GIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + TP + +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TSMIAGTPLAFA-NVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|256618226|ref|ZP_05475072.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256597753|gb|EEU16929.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] Length = 524 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ IG+ + R G +GI+ Sbjct: 145 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIING----IGLCFANEVRSGDIGIV 200 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ +ADE T++I+++ Sbjct: 201 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLI 260 Query: 213 GE 214 + Sbjct: 261 SK 262 >gi|254503300|ref|ZP_05115451.1| acetyltransferase, GNAT family [Labrenzia alexandrii DFL-11] gi|222439371|gb|EEE46050.1| acetyltransferase, GNAT family [Labrenzia alexandrii DFL-11] Length = 910 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 9/154 (5%) Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 P++ R AR K++ RLIGP GI P ++ + KG + SRSG + Sbjct: 110 PIMQACREAAR--KTTLRLIGPGSLGISVPAKGLNALLSAEVPGKGDIAFFSRSGAVLNA 167 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + G S+ V +G + D+++ F D T +IV+ + G A + Sbjct: 168 TLSWAKTHNTGFSSIVSLGAR--IDVDVSDLIDYFAQDYRTRAIVL--HLEGVAVPH--K 221 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGRT-MGHAG 258 F+ R KP++ +G++ G T HAG Sbjct: 222 FMSAARAAARGKPVIVLRSGRSRDTGGTGRTHAG 255 >gi|200390577|ref|ZP_03217188.1| protein FdrA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199603022|gb|EDZ01568.1| protein FdrA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 554 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 16/188 (8%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +++ V A + ++++ + +++ ++ + + D +R+K R ++GP+C Sbjct: 118 ANLALVSVAGEYAAELAEQALDRSLNVMI-FSDNVTLDDEIRLKRRARDKGLLVMGPDCG 176 Query: 131 GILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP- 187 + ++ +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TAMIANTPLAFANVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDL 231 Query: 188 ---VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 V G + L++ ADE ++ + V + A + A + KP+V Sbjct: 232 SAEVGGISALMALDILSADEKSQVLAFVSKPPADAVRQHII----AAMKATGKPVVALFL 287 Query: 245 GKTAPPGR 252 G ++P R Sbjct: 288 GFSSPVAR 295 >gi|309700780|emb|CBJ00076.1| FdrA protein [Escherichia coli ETEC H10407] gi|323938467|gb|EGB34718.1| bacterial FdrA protein [Escherichia coli E1520] Length = 555 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDCG 176 Query: 131 GIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + TP + +MP +G++G++ SGT E Q + G G + A+G+GG Sbjct: 177 TSMIAGTPLAFA-NVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|284009264|emb|CBA76383.1| acyl-CoA synthetase/acetyltransferase [Arsenophonus nasoniae] Length = 877 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 10/152 (6%) Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTY 164 P V++KA ++ + RL+GPN GIL P P I KG + +S+S ++ Sbjct: 103 PPSQFVKLKALTQRYNIRLLGPNSLGILAPWQQLNASFSPIPIL-KGKLAFISQSAAVSN 161 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA-DEATESIVMVGEIGGSAEEEA 223 + Q +G S + +G + L FLA D T +I++ E ++A Sbjct: 162 IILDWAQQRKIGFSYFIALGNSLDIDID---DLLDFLARDNKTSAILLYIE----HIQQA 214 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +FL R KPI+ +G+T +G Sbjct: 215 RRFLSAARSASRNKPILVVKSGRTQQAQYLLG 246 >gi|144899932|emb|CAM76796.1| GCN5-related N-acetyltransferase:CoA-binding [Magnetospirillum gryphiswaldense MSR-1] Length = 907 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 8/146 (5%) Query: 102 TEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGT 161 + G+ V D VR +A++ R++GPN G+L P I G + +S+SG Sbjct: 110 SSGLSVFDSVRAEAKIH--GIRVLGPNSMGMLVPGIGLNASFAPDIAPAGKIAFVSQSGA 167 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 L + +G+G S + G +F +L+ +D T +I++ + + Sbjct: 168 LCSAVLDWACAKGIGFSHFIHTGES--MDVDFGHILDYLGSDPHTRAILLYLQ----TVD 221 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKT 247 E F+ R KPI+ AG++ Sbjct: 222 ERRNFMSAARAAARNKPILAIKAGRS 247 >gi|91793232|ref|YP_562883.1| GCN5-related N-acetyltransferase [Shewanella denitrificans OS217] gi|91715234|gb|ABE55160.1| GCN5-related N-acetyltransferase [Shewanella denitrificans OS217] Length = 899 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 6/133 (4%) Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 A ++ RL+GPN G+L P+ + + + G + LS+S + + + +G Sbjct: 121 AHAKRYGMRLLGPNSLGMLFPNIGLNASLTHTNAKLGKIAFLSQSSAICTTVLDWANNKG 180 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G S + +G +F ++L+ D T +I++ + A E FL Sbjct: 181 IGFSAIISLGD--AADVDFDELLDYLGKDSQTSAIILYLD----AINEKRHFLSAARAAS 234 Query: 235 RKKPIVGFVAGKT 247 R KPI+ +G++ Sbjct: 235 RNKPILVLKSGRS 247 >gi|256020295|ref|ZP_05434160.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Shigella sp. D9] gi|300820448|ref|ZP_07100600.1| bacterial FdrA protein [Escherichia coli MS 119-7] gi|331666627|ref|ZP_08367501.1| putative oxidoreductase subunit [Escherichia coli TA271] gi|331675981|ref|ZP_08376693.1| putative oxidoreductase subunit [Escherichia coli H591] gi|332281461|ref|ZP_08393874.1| bacterial FdrA protein [Shigella sp. D9] gi|300527233|gb|EFK48302.1| bacterial FdrA protein [Escherichia coli MS 119-7] gi|331065851|gb|EGI37735.1| putative oxidoreductase subunit [Escherichia coli TA271] gi|331076039|gb|EGI47321.1| putative oxidoreductase subunit [Escherichia coli H591] gi|332103813|gb|EGJ07159.1| bacterial FdrA protein [Shigella sp. D9] Length = 515 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|227511403|ref|ZP_03941452.1| membrane protein [Lactobacillus buchneri ATCC 11577] gi|227085354|gb|EEI20666.1| membrane protein [Lactobacillus buchneri ATCC 11577] Length = 587 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 15/155 (9%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 + C ++ + + D R+K + L+GP+C GI + I + + RKGS+G++ Sbjct: 143 VFCFSDNVSMEDEARLKQMAHEKGLVLMGPDCGTGI----ANGIPLAFANRVRKGSIGMV 198 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT E + G G + A+G GG +K GT F D + L D + IV + Sbjct: 199 GASGTGIQEVSTIIHKLGAGVTNAIGTGGRDLKADIQGTTFKDSVALLDQDPDVKVIVAI 258 Query: 213 GE-IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + ++ L R KP+V G+ Sbjct: 259 SKPPAPEVRDDVLSLL-----RATNKPVVAIFLGE 288 >gi|16759504|ref|NP_455121.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142724|ref|NP_806066.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213162258|ref|ZP_03347968.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427924|ref|ZP_03360674.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213622424|ref|ZP_03375207.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647069|ref|ZP_03377122.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855433|ref|ZP_03383673.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25511983|pir||AC0568 FdrA protein [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501796|emb|CAD05013.1| FdrA protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29138355|gb|AAO69926.1| FdrA protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 554 Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 73/161 (45%), Gaps = 15/161 (9%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGI 155 ++ ++ + + D +R+K R ++GP+C + ++ +MP +G++G+ Sbjct: 144 VMIFSDNVTLDDEIRLKRRARDKGLLVMGPDCGTAMIANTPLAFANVMP-----EGNIGV 198 Query: 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVM 211 + SGT E Q + G G + A+G+GG V G + L++ ADE ++ + Sbjct: 199 IGASGTGIQELCSQIALAGEGITHAIGLGGRDLSAEVGGISALTALDILSADEKSQVLAF 258 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + A + A + KP+V G ++P R Sbjct: 259 VSKPPADAVRQHII----AAMKATGKPVVALFLGFSSPVAR 295 >gi|312951759|ref|ZP_07770651.1| putative membrane protein FdrA [Enterococcus faecalis TX0102] gi|310630247|gb|EFQ13530.1| putative membrane protein FdrA [Enterococcus faecalis TX0102] gi|315153392|gb|EFT97408.1| putative membrane protein FdrA [Enterococcus faecalis TX0031] Length = 519 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V D + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDDELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ + DE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|218288389|ref|ZP_03492679.1| CoA-binding domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218241362|gb|EED08536.1| CoA-binding domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 637 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 25/221 (11%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKARLEKSSSRLI 125 + +V+ VP S I + I A I ++ ++ G +D + +L + RLI Sbjct: 69 DLAVLVVPASQVLSVIDDVIAAGIKHVMILSSGFSDMDKPGEELEREISEKLRAAGCRLI 128 Query: 126 GPNCPGILTPDS---CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 GPN G++ DS P + G V I S SG L + + GLG ++ V Sbjct: 129 GPNSLGLIQMDSETRLNASFAP-KVPEYGHVAIASHSGALGITILDYAAYIGLGVASFVS 187 Query: 183 IGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G V G D+L+ + D A E I++ E G+ F + + R+KPI+ Sbjct: 188 LGNRADVSGN---DLLQYWGDDPAIEMILLYLESFGNPR----NFSRLARRITRQKPILA 240 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAED-KINAM-KEAGI 280 + +T P G+ + ++ V AED + AM ++AG+ Sbjct: 241 VKSART-PVGQDVANSRTV----SVAAEDATVEAMFQQAGV 276 >gi|302555344|ref|ZP_07307686.1| acyl-CoA synthetase [Streptomyces viridochromogenes DSM 40736] gi|302472962|gb|EFL36055.1| acyl-CoA synthetase [Streptomyces viridochromogenes DSM 40736] Length = 582 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 92/227 (40%), Gaps = 33/227 (14%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGP 127 + +V +P A+ E +IP V I G ++A + E+ RL+GP Sbjct: 321 DVAVFAIPARFVASALEEVGRKKIPNAVLIPSGFAETGEHELQAEIVTIAERHGVRLLGP 380 Query: 128 NCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 N G + D C P + KG V + S+SG + + G S VG+G Sbjct: 381 NIYGYYSTWQDLCATFCTPYDV--KGGVALTSQSGGIGMAILGFARTTRTGVSAIVGLGN 438 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-----EAKRGR--KKP 238 + D+L F D T+ I M + LKD EA R KKP Sbjct: 439 K--SDLDEDDLLTWFGEDPNTQCIAM-----------HLEDLKDGRAFVEAARATVPKKP 485 Query: 239 IVGFVAGKTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGICIAP 284 +V AG+TA + G H GA+ G D I +++AG+ AP Sbjct: 486 VVVLKAGRTAAGAKAAGSHTGAL--AGDDAVYDDI--LRQAGVIRAP 528 >gi|328953425|ref|YP_004370759.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109] gi|328453749|gb|AEB09578.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109] Length = 676 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 9/130 (6%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + + R+IGPNC GI P P + +G++ +S+SGT+ + SQE LG Sbjct: 124 RRHNVRVIGPNCQGINNPHHNLCASWP-LLTTRGAMAFISQSGTVGAALMDWASQELLGV 182 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V +G + D ++ F D T+ I + E + FL +A K Sbjct: 183 SVFVSLGNR--ADIDEADAIQYFNQDPHTKVIALYIE----GVKRPVYFL--DALAEATK 234 Query: 238 PIVGFVAGKT 247 P+V AG+T Sbjct: 235 PVVILKAGRT 244 >gi|226306290|ref|YP_002766250.1| acetate--CoA ligase [Rhodococcus erythropolis PR4] gi|226185407|dbj|BAH33511.1| putative acetate--CoA ligase [Rhodococcus erythropolis PR4] Length = 901 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 12/132 (9%) Query: 123 RLIGPNCPGILTPD---SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPN G+ D S + P + G+VG +SG L + + ++ +G S Sbjct: 338 RLIGPNALGVANNDPSISLNATLAP-VLPVAGNVGFFCQSGALGIAILDEAARSRIGLSA 396 Query: 180 AVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V G V G D+L+ + +D++TE +++ E G+ +F + + RKKP Sbjct: 397 FVSAGNRADVSGN---DLLQYWDSDQSTEVVLLYLESFGNPR----KFSRIARRVARKKP 449 Query: 239 IVGFVAGKTAPP 250 IV +G+ A P Sbjct: 450 IVAVKSGRHAVP 461 >gi|157382784|gb|ABV48829.1| ATP citrate lyase alpha subunit [Caminibacter mediatlanticus] Length = 349 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 8/106 (7%) Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPI 239 + IGGD G+ FID + + + +V++GE+GG E + + +K+ G+ KP+ Sbjct: 2 IAIGGDRFVGSTFIDHMLRMEKNPDVKYMVLLGEVGGREEYKIIEAIKE----GKITKPV 57 Query: 240 VGFVAG---KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 + + G K G GHAGA + + AE K AM+EAGI + Sbjct: 58 IAWCIGTIAKHFSSGVQFGHAGASANAEEETAEAKNRAMREAGIHV 103 >gi|170683991|ref|YP_001742455.1| acyl-CoA synthetase [Escherichia coli SMS-3-5] gi|170521709|gb|ACB19887.1| bacterial FdrA protein [Escherichia coli SMS-3-5] Length = 515 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 46/196 (23%), Positives = 92/196 (46%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + L+GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLLMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G D + + D TE IV++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMFDAIGMLENDPQTEIIVLISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|145592005|ref|YP_001154007.1| CoA-binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145283773|gb|ABP51355.1| CoA-binding domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 461 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 7/155 (4%) Query: 113 VKARLEKSSSRLIGPNCPGILTPDS-CKIGIMPGSIFRK---GSVGILSRSGTLTYEAVF 168 VKA ++ R++GPNC G+ S +P + G + ++S+SG + + Sbjct: 115 VKAVAKQYGVRVLGPNCIGVYNAYSGFDTVFLPAERAGRPPPGPLALISQSGAVAAAIMD 174 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ LG V G + TE ++LE F AD+ + I + E G EA QFL+ Sbjct: 175 WAARRRLGLGFLVNYG-NKADITE-TELLEGFAADDRVKVITIYIE-GFKYPGEARQFLE 231 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISG 263 K KKP+V + AG+ R + A ++G Sbjct: 232 TAKKIAAKKPVVAYKAGRGGAAQRAVKSHTAAMAG 266 >gi|157154800|ref|YP_001461492.1| acyl-CoA synthetase [Escherichia coli E24377A] gi|157076830|gb|ABV16538.1| bacterial FdrA protein [Escherichia coli E24377A] Length = 515 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGF 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|302557244|ref|ZP_07309586.1| acetyl coenzyme A synthetase (ADP forming) [Streptomyces griseoflavus Tu4000] gi|302474862|gb|EFL37955.1| acetyl coenzyme A synthetase (ADP forming) [Streptomyces griseoflavus Tu4000] Length = 715 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 74/177 (41%), Gaps = 29/177 (16%) Query: 118 EKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 E+ RL+GPN G + D C P + KG V + S+SG + + Sbjct: 371 ERHGVRLLGPNIYGYYSTWQDLCATFCTPYDV--KGPVALTSQSGGIGMAILGFARTTKT 428 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-----E 230 G S VG+G + D+L F D TE I M + LKD E Sbjct: 429 GVSAIVGLGNK--SDLDEDDLLTWFGEDPHTECIAM-----------HLEDLKDGRAFVE 475 Query: 231 AKRGR--KKPIVGFVAGKTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGICIAP 284 A R KKP+V AG+TA + G H GA+ G D I +++AG+ AP Sbjct: 476 AARATVPKKPVVVLKAGRTAAGAKAAGSHTGAL--AGDDAVYDDI--LRQAGVIRAP 528 >gi|91778206|ref|YP_553414.1| putative acyl-CoA synthetase [Burkholderia xenovorans LB400] gi|91690866|gb|ABE34064.1| Putative acyl-CoA synthetase [Burkholderia xenovorans LB400] Length = 718 Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 10/98 (10%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK-----GSVGILSRSGTLTYEAVFQTSQ 172 ++ RL+GPNC GI++P + ++ + P + G VG +S+SG L +F ++ Sbjct: 127 RSANMRLVGPNCLGIISP-AHRVVLCPSTALVAEGLPVGRVGFVSQSGALM-GTIFDKAK 184 Query: 173 E-GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 E GL S A+ +G E D +E + D AT I Sbjct: 185 EIGLAFSHAISVGNQ--ADLELCDFVEYLIGDPATAVI 220 >gi|34604716|gb|AAQ79811.1| acetyl-CoA synthetase (ADP-forming) alpha subunit [Haloarcula sp. D1] Length = 453 Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 12/146 (8%) Query: 118 EKSSSRLIGPNCPGILTPDS---CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 E+ L+GPN G + P + C +G+ ++++SG + + FQ+ ++G Sbjct: 114 EEYGISLLGPNTSGFVVPATDLLCSFA-SGAEKLPEGNTAVIAQSGGIAHVLAFQSRRQG 172 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 G S VG+G G F + +E F D+ T++IV+ E ++ L EA R Sbjct: 173 RGVSAMVGLGNRANVG--FTETIEYFDGDDRTDAIVLHVE----GTDDGRGLL--EACRD 224 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAV 260 P++ + G++ H GA+ Sbjct: 225 SDTPVIAYKVGQSDVGEFAESHTGAL 250 >gi|299132942|ref|ZP_07026137.1| CoA-binding domain protein [Afipia sp. 1NLS2] gi|298593079|gb|EFI53279.1| CoA-binding domain protein [Afipia sp. 1NLS2] Length = 711 Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 28/234 (11%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGP 127 + +V +P A+ E E +IP V I G + ++ + +K RL+GP Sbjct: 320 DVAVFAIPAKFVAGALTECGEKKIPGAVLIPSGFAEANEPELQEEIVKIGQKYDIRLMGP 379 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 N G + + KGS + S+SG + + + +G S VG+G Sbjct: 380 NIYGFYYTPANLCATFCTAFDVKGSAALSSQSGGIGMAIIGFSRSAKMGVSAIVGLGNK- 438 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPIVGFVAGK 246 + D+L F D+ T I M E + + + + AKR +KKP++ G+ Sbjct: 439 -SDIDEDDLLAFFEQDKNTNVIAMHCE-----DLKDGRAFANAAKRVSKKKPVIVLKGGR 492 Query: 247 TAPPGRTMG-HAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARIGRSLVELL 297 T+ + H GA+ DKI + K++G+ A RSL +LL Sbjct: 493 TSAGAKAAASHTGAL------AGNDKIYEDVFKQSGVIRA-------RSLRQLL 533 >gi|290956178|ref|YP_003487360.1| hypothetical protein SCAB_16611 [Streptomyces scabiei 87.22] gi|260645704|emb|CBG68795.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 710 Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 72/176 (40%), Gaps = 27/176 (15%) Query: 118 EKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 E+ RL+GPN G + D C P + KG V + S+SG + + Sbjct: 370 ERHGIRLLGPNIYGYYSTWQDLCATFCTPYDV--KGGVALTSQSGGIGMAILGFARATKT 427 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-----E 230 G S VG+G + D+L F D TE I M + LKD E Sbjct: 428 GVSAIVGLGNK--SDLDEDDLLTWFGEDPRTECIAM-----------HLEDLKDGRAFVE 474 Query: 231 AKRGR--KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 A R KKP+V AG+TA + G ++G ED +K+AG+ AP Sbjct: 475 AARATVPKKPVVVLKAGRTAAGAKAAGSHTGALAGDDAVYED---ILKQAGVIRAP 527 >gi|256023865|ref|ZP_05437730.1| membrane protein FdrA [Escherichia sp. 4_1_40B] gi|301648565|ref|ZP_07248281.1| membrane protein FdrA [Escherichia coli MS 146-1] gi|301073384|gb|EFK88190.1| membrane protein FdrA [Escherichia coli MS 146-1] gi|315616542|gb|EFU97159.1| protein fdrA [Escherichia coli 3431] Length = 555 Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGIL---TPDSCKIGIMPGSIFRKGSVG 154 ++ ++ + + D +++K+R + ++GP+C + TP + +MP +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKSRAREKGLLVMGPDCGTSMIAGTPLAFA-NVMP-----EGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ ADE +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|283835366|ref|ZP_06355107.1| putative oxidoreductase subunit [Citrobacter youngae ATCC 29220] gi|291068533|gb|EFE06642.1| putative oxidoreductase subunit [Citrobacter youngae ATCC 29220] Length = 515 Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 13/214 (6%) Query: 47 TYWTGGNVNVPVFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI 105 T+ G + + T+A AK+ +N +VI V A ++++ + +++ ++ + Sbjct: 89 THKEQGGQHEARYATLASAKKHVPDSNLAVISVNGLFAAREARQALQNNLNVML-FSDNV 147 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 + D + +K + ++GP+C + + + G+ R+G++GI+ SGT + E Sbjct: 148 SLEDELALKQLAHEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQE 204 Query: 166 AVFQTSQEGLGQSTAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 + + G G S +G GG + + G +D + + AD TE I ++ + A Sbjct: 205 LSVRIHEFGGGISQLIGTGGRDLSEKIGGLMMLDAIGMLEADPQTEIIALISKPPAPA-- 262 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 A + L E R KP+V G+ A P G Sbjct: 263 VARKVL--ERARACHKPVVVCFLGREAAPADEKG 294 >gi|26246526|ref|NP_752565.1| membrane protein FdrA [Escherichia coli CFT073] gi|26106925|gb|AAN79109.1|AE016757_13 Protein fdrA [Escherichia coli CFT073] Length = 555 Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + E + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAETVRLKIXNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|297624838|ref|YP_003706272.1| GCN5-related N-acetyltransferase [Truepera radiovictrix DSM 17093] gi|297166018|gb|ADI15729.1| GCN5-related N-acetyltransferase [Truepera radiovictrix DSM 17093] Length = 883 Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPN G++ + GSV + S+SG L + + GLG S+ V Sbjct: 328 RLIGPNSLGVINLSVGLNASLAPHPPPAGSVAVSSQSGALGLAILEHAAAAGLGLSSFVS 387 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + D+L+ + DEAT+ I++ G+ +F + + GRKKPI+ Sbjct: 388 LGNKADVSSN--DLLQYWEDDEATKLILLYLASFGNPR----RFARLARRVGRKKPILAV 441 Query: 243 VAGK 246 AG+ Sbjct: 442 KAGR 445 >gi|323976202|gb|EGB71295.1| FdrA protein [Escherichia coli TW10509] Length = 515 Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 94/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ +++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLNVML-FSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|307137161|ref|ZP_07496517.1| membrane protein FdrA [Escherichia coli H736] gi|331641040|ref|ZP_08342175.1| protein FdrA [Escherichia coli H736] gi|331037838|gb|EGI10058.1| protein FdrA [Escherichia coli H736] Length = 555 Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGIL---TPDSCKIGIMPGSIFRKGSVG 154 ++ ++ + + D +++K+R + ++GP+C + TP + +MP +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKSRAREKGLLVMGPDCGTSMIAGTPLAFA-NVMP-----EGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ ADE +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|332158874|ref|YP_004424153.1| hypothetical protein PNA2_1235 [Pyrococcus sp. NA2] gi|331034337|gb|AEC52149.1| hypothetical protein PNA2_1235 [Pyrococcus sp. NA2] Length = 439 Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 20/226 (8%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 ++PK G G FT E E+ + S+I +P D +I ++ V Sbjct: 41 VNPKGGEVEIAGKR-----FTIKRELDEKV--DVSIIVIPAKLVPD-LIRKLKGLTKGAV 92 Query: 100 CITEGIPVLDMVRVKARLEKSSS----RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGI 155 I+ G + V ++ L +++ R+IGPNC GI G + G + + Sbjct: 93 VISAGFSEVGNVELEDELVRAAREAGIRVIGPNCAGIFGVHGKFFGSFEVRV-NPGGLAL 151 Query: 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEI 215 +S+SG A+ ++EG+G S V G + D L F DE T+ I + E Sbjct: 152 ISQSGAFGGAALAMGNEEGVGFSAFVSYGN--AADLDESDFLRYFAEDENTKVIALYIE- 208 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG-HAGAV 260 ++ +F + ++KP++ AGK+ + H G++ Sbjct: 209 ---GVKDGRKFFEALKYASKRKPVIILKAGKSKSGAKAAASHTGSL 251 >gi|229491257|ref|ZP_04385083.1| CoA-binding domain protein [Rhodococcus erythropolis SK121] gi|229321796|gb|EEN87591.1| CoA-binding domain protein [Rhodococcus erythropolis SK121] Length = 734 Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 12/132 (9%) Query: 123 RLIGPNCPGILTPD---SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPN G+ D S + P + G+VG +SG L + + ++ +G S Sbjct: 171 RLIGPNALGVANNDPAISLNATLAP-VLPVAGNVGFFCQSGALGIAILDEAARSRIGLSA 229 Query: 180 AVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V G V G D+L+ + +D++TE +++ E G+ +F + + RKKP Sbjct: 230 FVSAGNRADVSGN---DLLQYWDSDQSTEVVLLYLESFGNPR----KFSRIARRVARKKP 282 Query: 239 IVGFVAGKTAPP 250 IV +G+ A P Sbjct: 283 IVAVKSGRHAVP 294 >gi|218779538|ref|YP_002430856.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760922|gb|ACL03388.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 468 Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 26/215 (12%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP-------VLDMVRVKARLEKSSSRL 124 + ++I VP S A +A+++ E + V T G + + +K+ RL Sbjct: 76 DMAIILVPNSQAKEAVVQCAEKGVKGAVLFTAGYKETGEEEGAALEEEMASIAKKAGMRL 135 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPN G+ +P++ I PG + G + +LS SG++ ++GL AV +G Sbjct: 136 IGPNGMGLYSPEA-GISFFPGLPAKLGPIALLSHSGSMANILCRMGPEKGLYFRFAVSLG 194 Query: 185 G--DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE--EEAAQFLKDEAKRGRKKPIV 240 D G D LE D T G + E + FLK+ K KP++ Sbjct: 195 NECDLTAG----DFLEYCAQDSKT------GIVAAYLEGIRKGDVFLKNLKKASENKPVI 244 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 + G P G + A A +G G E NA+ Sbjct: 245 LWKMGLN-PEGAS---AAASHTGSMAGDERIWNAV 275 >gi|302339818|ref|YP_003805024.1| CoA-binding protein [Spirochaeta smaragdinae DSM 11293] gi|301637003|gb|ADK82430.1| CoA-binding domain protein [Spirochaeta smaragdinae DSM 11293] Length = 467 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 26/235 (11%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 +HP + + +V V E T A VI V + E I + +V Sbjct: 45 VHPSRSEIFSVPAYPSVSALPEVPELALVTVARQRVIPV--------VEECIACGVKAVV 96 Query: 100 CITEGIPVLDMV--RVKARLEKSSSRL--IGPNCPGILTPDSCKIGIMPGSIF---RKGS 152 I+ G D ++ RL++ SSR+ IGPNC G+ K +F R+G Sbjct: 97 IISAGFAEADDYGRSLQRRLKELSSRIRIIGPNCAGLA---DVKNSFFMTRLFAKPRRGG 153 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 V +S SG L + G+G +G E +V++ +L D T + Sbjct: 154 VSFVSSSGALMMALFGSFAGRGIGLRYLASLGNQVDVCME--EVMDYYLDDPETTVLTAF 211 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKK-PIVGFVAGKTAPPGRTMG-HAGAVISGGK 265 E GS + F++ K GRK+ P+V +G++ R H ++ S G+ Sbjct: 212 IEGVGSGD----SFVRLLQKAGRKRIPLVAVKSGRSELGSRIAATHTASLASSGR 262 >gi|297156125|gb|ADI05837.1| hypothetical protein SBI_02716 [Streptomyces bingchenggensis BCW-1] Length = 721 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 77/183 (42%), Gaps = 29/183 (15%) Query: 112 RVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 R+ A E+ RL+GPN G + D C P + KG V + S+SG + + Sbjct: 374 RIVAIAEEHGVRLLGPNIYGYYSTWQDLCATFCTPYDV--KGPVALTSQSGGIGMAILGF 431 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 G S VG+G + D+L F D T+ I M + LKD Sbjct: 432 ARTTRTGVSAIVGLGNK--SDVDEDDLLTYFGEDPNTQCIAM-----------HLEDLKD 478 Query: 230 -----EAKRGR--KKPIVGFVAGKTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGIC 281 EA R KKP+V AG+TA + G H GA+ G D I +++AG+ Sbjct: 479 GRAFVEAARATVPKKPVVVLKAGRTAAGAKAAGSHTGAL--AGDDAVYDDI--LRQAGVI 534 Query: 282 IAP 284 AP Sbjct: 535 RAP 537 >gi|332341881|gb|AEE55215.1| membrane protein FdrA [Escherichia coli UMNK88] Length = 555 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGIL---TPDSCKIGIMPGSIFRKGSVG 154 ++ ++ + + D +++K+R + ++GP+C + TP + +MP +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKSRAREKGLLVMGPDCGTSMIAGTPLAFA-NVMP-----EGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ ADE +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|209966034|ref|YP_002298949.1| acetyltransferase [Rhodospirillum centenum SW] gi|209959500|gb|ACJ00137.1| acetyltransferase [Rhodospirillum centenum SW] Length = 900 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 13/142 (9%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFR---KGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R++GPNC G++ P G+ G KG + ++++SG + + + G+G S Sbjct: 128 RVVGPNCLGVMVPAR---GVNAGFAHLPPLKGDIALVAQSGAVVTSILDWANARGIGFSH 184 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V +GG + +F D+L+ D +I++ E A A +F+ R KP+ Sbjct: 185 LVSLGG--MADVDFGDMLDYLAQDPNVRAILLYVE----AITHARKFMSAARAAARAKPV 238 Query: 240 VGFVAGKTAPPGRTM-GHAGAV 260 + AG++ + H GA+ Sbjct: 239 IVIKAGRSDEAAKAASSHTGAL 260 >gi|74318042|ref|YP_315782.1| long-chain fatty-acid-CoA ligase [Thiobacillus denitrificans ATCC 25259] gi|74057537|gb|AAZ97977.1| long-chain fatty-acid-CoA ligase [Thiobacillus denitrificans ATCC 25259] Length = 892 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 7/140 (5%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R IGPNC GI P + G + ++S+SG L + G+G S+ V Sbjct: 128 RFIGPNCLGIQRPAIGLNATFSQGATQAGDLALVSQSGALCTAMLDWAEANGIGFSSVVS 187 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 G +F ++L+ D T+ I++ E +A +F+ R KPIV Sbjct: 188 TGAS--ADLDFGEILDYLAYDRQTKGILLYIE----GIRDARRFMSALRATSRFKPIVMV 241 Query: 243 VAGKTAPPGRTM-GHAGAVI 261 G+ R + H GA++ Sbjct: 242 KVGRHEAGSRAVQSHTGALV 261 >gi|85859779|ref|YP_461981.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein [Syntrophus aciditrophicus SB] gi|85722870|gb|ABC77813.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein [Syntrophus aciditrophicus SB] Length = 918 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 15/173 (8%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 R+ A +K R++GPNC G + P+ + G + +S+SG L + Sbjct: 129 RITASRKKYGMRILGPNCLGFVRPNEGLNATFLKTNPPPGHIAFISQSGALGSAILDWAV 188 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 E +G S +G + +F D+++ D T SI++ E G+A+ +F+ Sbjct: 189 NEHVGFSMFASLGA--MSDVDFGDLIDFLGEDPDTRSILLYMEGVGNAK----KFMSAAR 242 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKIN--AMKEAGIC 281 +KPI+ PGR A A S G +D I A K AG+ Sbjct: 243 AFAMRKPII------VIKPGRFTESAQAARSHTGAMAGDDAIYEAAFKRAGVL 289 >gi|257088134|ref|ZP_05582495.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|256996164|gb|EEU83466.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|315026891|gb|EFT38823.1| putative membrane protein FdrA [Enterococcus faecalis TX2137] Length = 519 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ +ADE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|315154827|gb|EFT98843.1| bacterial FdrA protein [Enterococcus faecalis TX0043] Length = 519 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ +ADE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|218547831|ref|YP_002381622.1| hypothetical protein EFER_0419 [Escherichia fergusonii ATCC 35469] gi|218355372|emb|CAQ87979.1| putative enzyme with acyl-CoA domain [Escherichia fergusonii ATCC 35469] Length = 515 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|209885673|ref|YP_002289530.1| CoA-binding [Oligotropha carboxidovorans OM5] gi|209873869|gb|ACI93665.1| CoA-binding [Oligotropha carboxidovorans OM5] Length = 710 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 97/235 (41%), Gaps = 30/235 (12%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGP 127 + +V +P A+ E E +IP V I G + ++ + +K RL+GP Sbjct: 319 DVAVFAIPAKFVAGALTECGEKKIPGAVLIPSGFAEANEPELQEEIVKIGKKYDIRLMGP 378 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 N G + + KGS + S+SG + + + +G S VG+G Sbjct: 379 NIYGFYYTPANLCATFCTAFDVKGSAALSSQSGGIGMAIIGFSRSAKMGVSAIVGLGNK- 437 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEI--GGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 + D+L F D+ T I M E G A EAA+ + +KKP++ G Sbjct: 438 -SDIDEDDLLAFFEQDKNTNVIAMHCEDLKDGRAFAEAAR------RVSKKKPVIVLKGG 490 Query: 246 KTAPPGRTMG-HAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARIGRSLVELL 297 +T+ + H GA+ DKI + K++G+ A RSL +LL Sbjct: 491 RTSAGAKAAASHTGAL------AGNDKIYEDVFKQSGVIRA-------RSLRQLL 532 >gi|152965514|ref|YP_001361298.1| CoA-binding domain protein [Kineococcus radiotolerans SRS30216] gi|151360031|gb|ABS03034.1| CoA-binding domain protein [Kineococcus radiotolerans SRS30216] Length = 899 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 13/138 (9%) Query: 123 RLIGPNCPGILTPD-SCKIGI-MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPN G++ D + ++ + + R G G+ S+SG L + + GLG ST Sbjct: 324 RVIGPNSFGVVNTDPAVRLNASLAEEVPRPGRFGLFSQSGALAVTVLSSAQRRGLGLSTF 383 Query: 181 VGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V G V G D+++ + DEAT ++ + E G+ +F + R+KP+ Sbjct: 384 VSAGNRADVSGN---DLMQFWHDDEATSAVGLYLESVGNPR----KFSRVARGLARRKPV 436 Query: 240 VGFVAGKT---APPGRTM 254 + +G + PPG + Sbjct: 437 IVVKSGASGFGVPPGHAV 454 >gi|315149117|gb|EFT93133.1| putative membrane protein FdrA [Enterococcus faecalis TX0012] Length = 519 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ +ADE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|227517370|ref|ZP_03947419.1| bacterial FdrA protein [Enterococcus faecalis TX0104] gi|227075240|gb|EEI13203.1| bacterial FdrA protein [Enterococcus faecalis TX0104] Length = 519 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ +ADE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|146312710|ref|YP_001177784.1| GCN5-related N-acetyltransferase [Enterobacter sp. 638] gi|145319586|gb|ABP61733.1| GCN5-related N-acetyltransferase [Enterobacter sp. 638] Length = 887 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 15/164 (9%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A + RL+GPN G+L P P I RKG + +S+ Sbjct: 97 CIILSSPPEQQAELMACASRYQMRLLGPNSLGLLAPWQGLNASFSPVPI-RKGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + +G + IDV EL FLA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIALG-----DSLDIDVDELLDFLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAG 258 +A +F+ R KPI+ +G++ R + H+G Sbjct: 210 ---HLSDARRFVSAARSAARNKPILVIKSGRSPAAQRLLHSHSG 250 >gi|146341824|ref|YP_001206872.1| hypothetical protein BRADO4953 [Bradyrhizobium sp. ORS278] gi|146194630|emb|CAL78655.1| conserved hypothetical protein with a putative CoA binding domain; putative succinyl-CoA (or acyl-CoA) synthetase [Bradyrhizobium sp. ORS278] Length = 713 Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 98/235 (41%), Gaps = 30/235 (12%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGP 127 + +V +P A+ E E +IP V I G + ++A + +K + RL+GP Sbjct: 323 DTAVFAIPAKFVAGALTECGEKQIPGAVLIPSGFAEANEPELQAEIVEIGKKYNVRLMGP 382 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 N G + + KG + S+SG + + + +G S VG+G Sbjct: 383 NIYGFYYTPANLCATFCTAYDVKGHAALSSQSGGIGMAIIGFSRSAKMGVSAIVGLGNK- 441 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEI--GGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 + D+L F D T I E G A EAA+ + +KKP++ AG Sbjct: 442 -SDIDEDDLLAFFEQDPNTNLIAQHCEDLKDGRAFAEAAK------RVSKKKPVIVLKAG 494 Query: 246 KTAPPGRTM-GHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARIGRSLVELL 297 +T+ + H GA+ DKI + +K++G+ A RSL +LL Sbjct: 495 RTSAGAKAASSHTGAL------AGNDKIYEDVLKQSGVIRA-------RSLRQLL 536 >gi|307278154|ref|ZP_07559236.1| putative membrane protein FdrA [Enterococcus faecalis TX0860] gi|306505143|gb|EFM74331.1| putative membrane protein FdrA [Enterococcus faecalis TX0860] Length = 519 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ +ADE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|227508400|ref|ZP_03938449.1| conserved hypothetical protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227192050|gb|EEI72117.1| conserved hypothetical protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 993 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 6/116 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC- 129 AN +VI VP A D I +++ + V ++ + + D R+K + K ++GP+C Sbjct: 100 ANLAVISVPGLYAADEIDNALDHNLNAFV-FSDNVSLEDESRLKKKAHKKGLLVMGPDCG 158 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 GI++ + + ++ R G++G++ SGT E + G G + A+G GG Sbjct: 159 TGIIS----NVPLAFTNVVRSGNIGLVGASGTGIQEVTSMIERLGGGVTHAIGTGG 210 >gi|190576336|ref|YP_001974181.1| putative acyl-CoA synthetase [Stenotrophomonas maltophilia K279a] gi|190014258|emb|CAQ47905.1| putative acyl-CoA synthetase [Stenotrophomonas maltophilia K279a] Length = 908 Score = 43.1 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 12/192 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 A AS++ P A ++A I L + EG L +V+A K R++GP+C Sbjct: 77 APASIV---PQVVRTAAERGVQAAIILTAHLGEGPGSLS-AQVEAVARKHGLRILGPHCL 132 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G++ P + + + G + ++S S + V +G S V +G Sbjct: 133 GVIAPHARLNASIAAHFPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLGD--TMD 190 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT--A 248 +F D+L+ F D T +I++ E ++A +F+ R KP+V +G+ Sbjct: 191 VDFGDLLDYFATDYRTRAILLYVE----QIKDARKFMSAARAAARAKPVVVVKSGRAERV 246 Query: 249 PPGRTMGHAGAV 260 PG H A+ Sbjct: 247 QPGSRDTHVQAL 258 >gi|26246339|ref|NP_752378.1| hypothetical protein c0441 [Escherichia coli CFT073] gi|227884661|ref|ZP_04002466.1| bacterial FdrA protein [Escherichia coli 83972] gi|300977217|ref|ZP_07173778.1| bacterial FdrA protein [Escherichia coli MS 45-1] gi|301045946|ref|ZP_07193131.1| bacterial FdrA protein [Escherichia coli MS 185-1] gi|26106737|gb|AAN78922.1|AE016756_105 Hypothetical protein yahF [Escherichia coli CFT073] gi|227838262|gb|EEJ48728.1| bacterial FdrA protein [Escherichia coli 83972] gi|300302063|gb|EFJ58448.1| bacterial FdrA protein [Escherichia coli MS 185-1] gi|300409910|gb|EFJ93448.1| bacterial FdrA protein [Escherichia coli MS 45-1] gi|307552245|gb|ADN45020.1| FdrA-like protein [Escherichia coli ABU 83972] gi|315295190|gb|EFU54525.1| bacterial FdrA protein [Escherichia coli MS 153-1] Length = 515 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 105/227 (46%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ +++ ++ + V D + +K Sbjct: 101 YATIASAKKYIPESNLAVISVNGLFAAREARQALQNDLNVML-FSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIYEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|27378557|ref|NP_770086.1| 6-carboxyhexanoate--COA ligase [Bradyrhizobium japonicum USDA 110] gi|27351705|dbj|BAC48711.1| blr3446 [Bradyrhizobium japonicum USDA 110] Length = 707 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 23/202 (11%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL--------DM 110 + +VAE E A + ++I V AG+A+ + + +V + G L D Sbjct: 61 YASVAEVPE--APDLAIIAVDAERAGEAVEQCAARGVRSVVVFSSGFAELGEQGRAMQDR 118 Query: 111 VRVKARLEKSSSRLIGPNCPGILTPDSCKIG----IMPGSIFRKGSVGILSRSGTLTYEA 166 +R+ AR S RL+GPNC G ++ I ++ S+ GS+GI+S+SG L Sbjct: 119 LRLAAR--NSGMRLLGPNCLGAVSVAEKSIATFSIVLEHSMPAAGSLGIVSQSGNLGSYT 176 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + S+ G+G S + G + + D + D AT+ I+ E A +A + Sbjct: 177 MRLASERGVGVSRFITTGNE--CDVDIADGIAWMARDPATKVILCCLE----ACRDAGRL 230 Query: 227 LKD-EAKRGRKKPIVGFVAGKT 247 + E R KP++ G + Sbjct: 231 ISALEEARDAGKPVIAMKIGTS 252 >gi|293408468|ref|ZP_06652307.1| conserved hypothetical protein [Escherichia coli B354] gi|291471646|gb|EFF14129.1| conserved hypothetical protein [Escherichia coli B354] Length = 515 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|257420516|ref|ZP_05597506.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|257162340|gb|EEU92300.1| conserved hypothetical protein [Enterococcus faecalis X98] Length = 524 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 145 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 200 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ +ADE T++I+++ Sbjct: 201 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLI 260 Query: 213 GE 214 + Sbjct: 261 SK 262 >gi|218703605|ref|YP_002411124.1| hypothetical protein ECUMN_0359 [Escherichia coli UMN026] gi|293403440|ref|ZP_06647531.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298379051|ref|ZP_06988932.1| yahF protein [Escherichia coli FVEC1302] gi|300896300|ref|ZP_07114844.1| bacterial FdrA protein [Escherichia coli MS 198-1] gi|218430702|emb|CAR11574.1| putative enzyme with acyl-CoA domain [Escherichia coli UMN026] gi|291429293|gb|EFF02313.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298280164|gb|EFI21668.1| yahF protein [Escherichia coli FVEC1302] gi|300359841|gb|EFJ75711.1| bacterial FdrA protein [Escherichia coli MS 198-1] Length = 515 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|124028190|ref|YP_001013510.1| hypothetical protein Hbut_1336 [Hyperthermus butylicus DSM 5456] gi|123978884|gb|ABM81165.1| universally conserved protein [Hyperthermus butylicus DSM 5456] Length = 477 Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 11/169 (6%) Query: 118 EKSSSRLIGPNCPG-ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K R++GPN G + TP P + G V +++SG L + T EG+G Sbjct: 119 RKYGIRVLGPNVFGYVYTPSRINATFGPRDVI-PGGVAFITQSGALGIALMGTTIMEGIG 177 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S + +G + D LE F D T +IV++ G S + +F++ ++ K Sbjct: 178 VSAIISLGNK--ADLDDADFLEFFEKDPNT-NIVLIYMEGVS---DGRKFVEVASRVTLK 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 KPIV +G+T R ++G E A K++GI A S Sbjct: 232 KPIVVIKSGRTEAGARAAASHTGSLAGNIAFYE---AAFKQSGILFAKS 277 >gi|257417866|ref|ZP_05594860.1| succinyl-CoA synthetase [Enterococcus faecalis T11] gi|257159694|gb|EEU89654.1| succinyl-CoA synthetase [Enterococcus faecalis T11] Length = 524 Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 145 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 200 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ +ADE T++I+++ Sbjct: 201 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLI 260 Query: 213 GE 214 + Sbjct: 261 SK 262 >gi|193064379|ref|ZP_03045461.1| bacterial FdrA protein [Escherichia coli E22] gi|194427625|ref|ZP_03060173.1| bacterial FdrA protein [Escherichia coli B171] gi|209917532|ref|YP_002291616.1| hypothetical protein ECSE_0341 [Escherichia coli SE11] gi|218552883|ref|YP_002385796.1| hypothetical protein ECIAI1_0318 [Escherichia coli IAI1] gi|260842524|ref|YP_003220302.1| putative acyl-CoA synthetase [Escherichia coli O103:H2 str. 12009] gi|293418392|ref|ZP_06660827.1| yahF protein [Escherichia coli B088] gi|307312298|ref|ZP_07591934.1| FdrA family protein [Escherichia coli W] gi|192929041|gb|EDV82653.1| bacterial FdrA protein [Escherichia coli E22] gi|194414395|gb|EDX30669.1| bacterial FdrA protein [Escherichia coli B171] gi|209910791|dbj|BAG75865.1| conserved hypothetical protein [Escherichia coli SE11] gi|218359651|emb|CAQ97192.1| putative enzyme with acyl-CoA domain [Escherichia coli IAI1] gi|257757671|dbj|BAI29168.1| predicted acyl-CoA synthetase [Escherichia coli O103:H2 str. 12009] gi|291324920|gb|EFE64335.1| yahF protein [Escherichia coli B088] gi|306907800|gb|EFN38302.1| FdrA family protein [Escherichia coli W] gi|315059604|gb|ADT73931.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli W] gi|323184619|gb|EFZ69991.1| bacterial FdrA family protein [Escherichia coli 1357] gi|323379832|gb|ADX52100.1| putative acyl-CoA synthetase [Escherichia coli KO11] gi|323945501|gb|EGB41555.1| bacterial FdrA protein [Escherichia coli H120] gi|324020436|gb|EGB89655.1| bacterial FdrA protein [Escherichia coli MS 117-3] Length = 515 Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|325496296|gb|EGC94155.1| bacterial FdrA protein [Escherichia fergusonii ECD227] Length = 515 Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|324010171|gb|EGB79390.1| bacterial FdrA protein [Escherichia coli MS 57-2] Length = 515 Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YGTIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|323972171|gb|EGB67383.1| FdrA protein [Escherichia coli TA007] Length = 514 Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGIL---TPDSCKIGIMPGSIFRKGSVG 154 ++ ++ + + D +++K+R + ++GP+C + TP + +MP +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKSRAREKGLLVMGPDCGTSMIAGTPLAFA-NVMP-----EGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ ADE +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|331661693|ref|ZP_08362616.1| putative oxidoreductase subunit [Escherichia coli TA143] gi|331060115|gb|EGI32079.1| putative oxidoreductase subunit [Escherichia coli TA143] Length = 515 Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|324111285|gb|EGC05267.1| FdrA protein [Escherichia fergusonii B253] Length = 515 Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|257417162|ref|ZP_05594156.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG] gi|257158990|gb|EEU88950.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG] Length = 524 Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 145 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 200 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ +ADE T++I+++ Sbjct: 201 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLI 260 Query: 213 GE 214 + Sbjct: 261 SK 262 >gi|255974359|ref|ZP_05424945.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|255967231|gb|EET97853.1| conserved hypothetical protein [Enterococcus faecalis T2] Length = 524 Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 145 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 200 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ +ADE T++I+++ Sbjct: 201 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLI 260 Query: 213 GE 214 + Sbjct: 261 SK 262 >gi|295114358|emb|CBL32995.1| Succinyl-CoA synthetase, alpha subunit [Enterococcus sp. 7L76] Length = 519 Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ +ADE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|170682785|ref|YP_001742662.1| membrane protein FdrA [Escherichia coli SMS-3-5] gi|170520503|gb|ACB18681.1| bacterial FdrA protein [Escherichia coli SMS-3-5] Length = 555 Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVG 154 ++ ++ + + D +++K R + ++GP+C + I P ++ +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDC------GTSMIAATPLAFANVMPEGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ ADE +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|300861516|ref|ZP_07107600.1| Protein FdrA family protein [Enterococcus faecalis TUSoD Ef11] gi|300848977|gb|EFK76730.1| Protein FdrA family protein [Enterococcus faecalis TUSoD Ef11] gi|315145845|gb|EFT89861.1| putative membrane protein FdrA [Enterococcus faecalis TX2141] Length = 515 Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ +ADE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|33591854|ref|NP_879498.1| putative acetyl-CoA synthetase [Bordetella pertussis Tohama I] gi|33571497|emb|CAE44987.1| putative acetyl-CoA synthetase [Bordetella pertussis Tohama I] gi|332381271|gb|AEE66118.1| putative acetyl-CoA synthetase [Bordetella pertussis CS] Length = 713 Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 32/214 (14%) Query: 103 EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD-----SCKIGIMPGSIFRKGSVGILS 157 EG+ D + AR ++ RL+GPNC GI+ P + + + G + G++G++S Sbjct: 121 EGVARQDRIVRIAR--EAGMRLVGPNCMGIINPHHRMALTSSLVVEQGELL-PGNIGLIS 177 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG L + +E + S V +G E D E + D T I M E Sbjct: 178 QSGALMVSMYDRACREQIRFSACVSLGNQ--CDLEICDFFEYMIDDPLTRVITMYVE--- 232 Query: 218 SAEEEAAQFLKDEAKRGRK--KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 + +F K A+R ++ KP++ G+TA A ++G E A+ Sbjct: 233 -GFVDTGRFAK-LARRAQRAGKPVLLTKTGRTAAGAEAARSHTASLAGNYRALE----AL 286 Query: 276 KEA-GICIAPSP----------ARIGRSLVELLG 298 EA G+ I P AR GR E +G Sbjct: 287 CEATGVTIVDDPDGMLQLAAILARFGRCAAEGVG 320 >gi|320201482|gb|EFW76062.1| Protein fdrA [Escherichia coli EC4100B] Length = 555 Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVG 154 ++ ++ + + D +++K R + ++GP+C + I P ++ +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDC------GTSMIAATPLAFANVMPEGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ ADE +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|331681713|ref|ZP_08382346.1| putative oxidoreductase subunit [Escherichia coli H299] gi|331080915|gb|EGI52080.1| putative oxidoreductase subunit [Escherichia coli H299] Length = 515 Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVTVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|206889843|ref|YP_002249397.1| acetyl-CoA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206890566|ref|YP_002249447.1| acetyl-CoA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741781|gb|ACI20838.1| acetyl-CoA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742504|gb|ACI21561.1| acetyl-CoA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 695 Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust. Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 25/237 (10%) Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD---M 110 +++P + +V+ +R + ++I +P D++ + +A + +V IT G + + Sbjct: 50 LSLPCYPSVSAIPDRV--DLAIIVIPAKAVADSLKDCAKAGVKGVVVITAGFKEVGGDGV 107 Query: 111 VRVKARLEKSSS---RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 R K +E S +++GPNC G++ + + +G V S+SG L + Sbjct: 108 AREKEIVEIVRSAGIKMVGPNCLGVMNTKNKMNASFAAELPPEGRVAFFSQSGALGVAII 167 Query: 168 FQTSQEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE--EAA 224 + G S V G + T+F LE F D T+ I+ G E+ + Sbjct: 168 DWAIENNFGFSKFVSFGNKADLNETDF---LEYFAKDPDTDVIL------GYIEDVIDGK 218 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGI 280 +F++ + + KP++ +G T R H GA+ + E A ++ GI Sbjct: 219 RFIEIAKEVTKIKPVILIKSGATEAGARAASSHTGALAGSDRAFTE----AFRKTGI 271 >gi|284920130|emb|CBG33189.1| conserved hypothetical protein [Escherichia coli 042] Length = 515 Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|238893479|ref|YP_002918213.1| membrane protein FdrA [Klebsiella pneumoniae NTUH-K2044] gi|238545795|dbj|BAH62146.1| multicopy suppressor [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 555 Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + +++ +E +++ ++ + + D + +K R + ++GP+C Sbjct: 118 ANMTLISVAGEYAAELAHQALSSEKSVMI-FSDNVTLEDEIALKTRAREKGLLVMGPDCG 176 Query: 131 GIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + TP + ++ +G++G++ SGT E V Q + G G S A+G+GG Sbjct: 177 TAMIAGTP------LAFANVTPEGNIGVIGASGTGIQELVSQIALGGEGISHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G LE+ D ++ + V + +EA + A + KP+V Sbjct: 231 LSAEVGGLSAQTALEMLTQDAQSQVLAFVSK----PPDEAVRLKIINAMKRSAKPVVALF 286 Query: 244 AGKTAPPGR 252 G +P R Sbjct: 287 LGYVSPVNR 295 >gi|300940528|ref|ZP_07155097.1| membrane protein FdrA [Escherichia coli MS 21-1] gi|300454650|gb|EFK18143.1| membrane protein FdrA [Escherichia coli MS 21-1] Length = 555 Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVG 154 ++ ++ + + D +++K R + ++GP+C + I P ++ +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDC------GTSMIAATPLAFANVMPEGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ ADE +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|153872224|ref|ZP_02001177.1| GCN5-related N-acetyltransferase [Beggiatoa sp. PS] gi|152071310|gb|EDN68823.1| GCN5-related N-acetyltransferase [Beggiatoa sp. PS] Length = 882 Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 11/170 (6%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 +V A + R +GPN GI+ P S + G + ++S+SG L + Sbjct: 104 KVLANARRFGLRFLGPNSLGIMRPLIDLNATFTNSSAKSGHLALVSQSGALCSAILDWAC 163 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +G S+ + IG +F ++L+ ++D T I++ E +A F+ Sbjct: 164 PNDVGFSSIISIGTS--ADLDFGEILDYLVSDPQTHGILLYIE----DIHQARSFMSGLR 217 Query: 232 KRGRKKPIVGFVAGKTAPPGRT-MGHAGAVISGGKGGAEDKINAMKEAGI 280 R KP++ G+ T M H+G I G+ A D A++ AG+ Sbjct: 218 AAARMKPVIVIKTGRHENVFNTVMSHSGTQI--GRDDAFDA--ALQRAGV 263 >gi|323965265|gb|EGB60723.1| FdrA protein [Escherichia coli M863] gi|327254629|gb|EGE66245.1| bacterial FdrA family protein [Escherichia coli STEC_7v] Length = 515 Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGI 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|256761157|ref|ZP_05501737.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256682408|gb|EEU22103.1| conserved hypothetical protein [Enterococcus faecalis T3] Length = 524 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 145 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 200 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ +ADE T++I+++ Sbjct: 201 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLI 260 Query: 213 GE 214 + Sbjct: 261 SK 262 >gi|306813193|ref|ZP_07447386.1| putative enzyme with acyl-CoA domain [Escherichia coli NC101] gi|331656389|ref|ZP_08357351.1| putative oxidoreductase subunit [Escherichia coli TA206] gi|305853956|gb|EFM54395.1| putative enzyme with acyl-CoA domain [Escherichia coli NC101] gi|315300312|gb|EFU59548.1| bacterial FdrA protein [Escherichia coli MS 16-3] gi|331054637|gb|EGI26646.1| putative oxidoreductase subunit [Escherichia coli TA206] Length = 515 Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YGTIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIYEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|284920328|emb|CBG33388.1| FdrA protein [Escherichia coli 042] Length = 555 Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGIL---TPDSCKIGIMPGSIFRKGSVG 154 ++ ++ + + D +++K R + ++GP+C + TP + +MP +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFA-NVMP-----EGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ ADE +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|84685007|ref|ZP_01012906.1| acetyltransferase, GNAT family protein [Maritimibacter alkaliphilus HTCC2654] gi|84666739|gb|EAQ13210.1| acetyltransferase, GNAT family protein [Rhodobacterales bacterium HTCC2654] Length = 893 Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 15/154 (9%) Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAVF 168 +KA +++ R +GPNC G++ P M + R +G + ++S+SG L Sbjct: 118 LKAAAKRAGIRFMGPNCVGLVRP----WNKMNATFLRAGTPRGRLALISQSGALCSAISD 173 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 LG S V +G +F D+L+ +D T++I++ E A F+ Sbjct: 174 WAGPHHLGFSALVSLGNS--IDIDFGDMLQYLASDHHTDAILLYVE----GVRHAPGFIS 227 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMG-HAGAVI 261 R KP++ +G+ + H GA+I Sbjct: 228 ALRYAARLKPVIVLKSGRHSSSSEAAHTHTGALI 261 >gi|157160041|ref|YP_001457359.1| membrane protein FdrA [Escherichia coli HS] gi|300903211|ref|ZP_07121141.1| membrane protein FdrA [Escherichia coli MS 84-1] gi|301301674|ref|ZP_07207809.1| membrane protein FdrA [Escherichia coli MS 124-1] gi|157065721|gb|ABV04976.1| bacterial FdrA protein [Escherichia coli HS] gi|300404730|gb|EFJ88268.1| membrane protein FdrA [Escherichia coli MS 84-1] gi|300843171|gb|EFK70931.1| membrane protein FdrA [Escherichia coli MS 124-1] gi|315256347|gb|EFU36315.1| membrane protein FdrA [Escherichia coli MS 85-1] Length = 555 Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGIL---TPDSCKIGIMPGSIFRKGSVG 154 ++ ++ + + D +++K R + ++GP+C + TP + +MP +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFA-NVMP-----EGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ ADE +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|330808837|ref|YP_004353299.1| acid--thiol ligase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376945|gb|AEA68295.1| putative acid--thiol ligase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 704 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 18/145 (12%) Query: 79 PPSGAGDAIIESIEAEIPLIVCIT--------EGIPVLDMVRVKARLEKSSSRLIGPNCP 130 P G + S + ++P V ++ EGI + + V AR + R+IGPNC Sbjct: 76 PAQGVLAVLESSAQKKVPFAVVLSGGFRESGSEGIFREEKMLVIAR--AAGMRIIGPNCL 133 Query: 131 GILTPDSCKIGIMPGSIFR-----KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 G S ++ GSI R KGSV ++++SG Y ++ G+G + G Sbjct: 134 GFANIHS-RVYAAFGSITREPKLEKGSVSLVTQSGGFGYSIALACAEAGIGFRHVIATGN 192 Query: 186 DPVKGTEFIDVLELFLADEATESIV 210 + T + ++E L D+ T +IV Sbjct: 193 ESDVNT--VQLIEALLDDDETHTIV 215 >gi|258653918|ref|YP_003203074.1| GCN5-related N-acetyltransferase [Nakamurella multipartita DSM 44233] gi|258557143|gb|ACV80085.1| GCN5-related N-acetyltransferase [Nakamurella multipartita DSM 44233] Length = 893 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 12/130 (9%) Query: 123 RLIGPNCPGILTPD---SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RL+GPNC G++ D + P + G +G +SG L + + GLG ST Sbjct: 323 RLLGPNCLGLINTDPAVRLNASLAP-VVPPPGRIGFFCQSGALGVAILADAAARGLGLST 381 Query: 180 AVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V G V G D+L+ + D+ TE +++ E G+ +F + R KP Sbjct: 382 FVSAGNRADVSGN---DLLQYWHGDDRTELVLLYLESFGNPR----KFARLARVLARTKP 434 Query: 239 IVGFVAGKTA 248 ++ +G+ A Sbjct: 435 VIAVKSGRHA 444 >gi|224367413|ref|YP_002601576.1| hypothetical protein HRM2_02900 [Desulfobacterium autotrophicum HRM2] gi|223690129|gb|ACN13412.1| conserved hypothetical protein [Desulfobacterium autotrophicum HRM2] Length = 730 Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 27/188 (14%) Query: 113 VKARLEKSSSR----LIGPNCPGILTPDS------CKIGIMPGSIFRKGSVGILSRSGTL 162 ++ L K +SR ++GPN GI P + MPGS ++ +SG + Sbjct: 355 LERELVKEASRAGIIVLGPNTMGICNPHRGFFCSGAHVHPMPGS------TALVCQSGNM 408 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 + + +Q+ +G G G + + E D +E F D T ++V+ E + ++ Sbjct: 409 GTQLLAFATQQDIGIRAFSGSGNEAMVTIE--DYMEAFEIDALTSTVVLYLE----SVKD 462 Query: 223 AAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGIC 281 +F + + KKP+V G+T G+ H GA+ S K A+K+AG+ Sbjct: 463 GRRFFESATRVSTKKPVVVLNGGRTRAGGKAASSHTGAMASDAKVMRA----ALKQAGVI 518 Query: 282 IAPSPARI 289 P + Sbjct: 519 QVEQPMEL 526 >gi|191168126|ref|ZP_03029924.1| bacterial FdrA protein [Escherichia coli B7A] gi|309797207|ref|ZP_07691603.1| membrane protein FdrA [Escherichia coli MS 145-7] gi|190901856|gb|EDV61607.1| bacterial FdrA protein [Escherichia coli B7A] gi|308119191|gb|EFO56453.1| membrane protein FdrA [Escherichia coli MS 145-7] Length = 555 Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGIL---TPDSCKIGIMPGSIFRKGSVG 154 ++ ++ + + D +++K R + ++GP+C + TP + +MP +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFA-NVMP-----EGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ ADE +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|170021101|ref|YP_001726055.1| membrane protein FdrA [Escherichia coli ATCC 8739] gi|169756029|gb|ACA78728.1| FdrA family protein [Escherichia coli ATCC 8739] Length = 555 Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGIL---TPDSCKIGIMPGSIFRKGSVG 154 ++ ++ + + D +++K R + ++GP+C + TP + +MP +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFA-NVMP-----EGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ ADE +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|29828363|ref|NP_822997.1| acyl-CoA synthetase (NDP forming type) [Streptomyces avermitilis MA-4680] gi|29605466|dbj|BAC69532.1| putative acyl-CoA synthetase [Streptomyces avermitilis MA-4680] Length = 715 Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 72/170 (42%), Gaps = 15/170 (8%) Query: 118 EKSSSRLIGPNCPGILTP--DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 E+ RL+GPN G + D C P + KG V + S+SG + + Sbjct: 371 ERHGVRLLGPNIYGYYSTWHDLCATFCTPYDV--KGGVALTSQSGGIGMAILGFARTTKT 428 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S VG+G + D+L F D TE I M E ++ F+ Sbjct: 429 GVSAIVGLGNK--SDLDEDDLLTWFGEDPHTECIAMHLE----DLKDGRAFVAAARATVP 482 Query: 236 KKPIVGFVAGKTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGICIAP 284 +KP+V AG+TA + G H GA+ G D I +K+AG+ AP Sbjct: 483 RKPVVVLKAGRTAAGAKAAGSHTGAL--AGDDAVYDDI--LKQAGVIRAP 528 >gi|193064144|ref|ZP_03045228.1| bacterial FdrA protein [Escherichia coli E22] gi|260842713|ref|YP_003220491.1| putative acyl-CoA synthetase [Escherichia coli O103:H2 str. 12009] gi|192929173|gb|EDV82783.1| bacterial FdrA protein [Escherichia coli E22] gi|257757860|dbj|BAI29357.1| predicted acyl-CoA synthetase [Escherichia coli O103:H2 str. 12009] Length = 555 Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 17/157 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGIL---TPDSCKIGIMPGSIFRKGSVG 154 ++ ++ + + D +++K R + ++GP+C + TP + +MP +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFA-NVMP-----EGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ ADE +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEMLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 V + EA + A + KP V G T Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYT 290 >gi|159037061|ref|YP_001536314.1| CoA-binding domain-containing protein [Salinispora arenicola CNS-205] gi|157915896|gb|ABV97323.1| CoA-binding domain protein [Salinispora arenicola CNS-205] Length = 909 Score = 42.7 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 17/151 (11%) Query: 123 RLIGPNCPGIL-TPDSCKI-GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNC G+ T ++ + + G VG+ S+SG + + + GLG S+ Sbjct: 340 RIIGPNCLGVANTGTEVRLNATLAPRLPVPGRVGLFSQSGAFGVALLAEVDRRGLGLSSL 399 Query: 181 VGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V G V G D+L+ + D T+ I++ E G+ +F + + GR+KPI Sbjct: 400 VSAGNRADVSGN---DLLQYWQDDPDTDVILLYLETFGNPR----KFARLARRIGREKPI 452 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 V APP R G + +G GGA + Sbjct: 453 VAL-----APPARLPGLGPS--AGPNGGAAN 476 >gi|33603770|ref|NP_891330.1| putative acetyl-CoA synthetase [Bordetella bronchiseptica RB50] gi|33577895|emb|CAE35160.1| putative acetyl-CoA synthetase [Bordetella bronchiseptica RB50] Length = 713 Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 13/151 (8%) Query: 103 EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD-----SCKIGIMPGSIFRKGSVGILS 157 EG+ D + AR ++ RL+GPNC GI+ P + + + G + G++G++S Sbjct: 121 EGVARQDRIVRIAR--EAGMRLVGPNCMGIINPHHRMALTSSLVVEQGELL-PGNIGLIS 177 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 +SG L + +E + S V +G E D E + D T I M E G Sbjct: 178 QSGALMVSMYDRACREQIRFSACVSLGNQ--CDLEICDFFEYMIDDPLTRVITMYVE--G 233 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 + L A+R KP++ G+TA Sbjct: 234 FVDTGRFAELARRAQRA-GKPVLLTKTGRTA 263 >gi|147678572|ref|YP_001212787.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI] gi|146274669|dbj|BAF60418.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI] Length = 701 Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust. Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 20/210 (9%) Query: 74 SVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS--------SSRLI 125 +V+ VP +A E EA + ++ +T G ++ R LEK R++ Sbjct: 71 AVLSVPAGRVLEAARECGEAGVKALIVVTAGFK--EIGREGMELEKELVETCRTYGMRML 128 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 GPNC G++ + + G + LS+SG + + +S GLG + V +G Sbjct: 129 GPNCVGLMDASTPLNASFSSTFTTGGRIAFLSQSGAMLLAILDWSSSVGLGFNKVVSLGN 188 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGE--IGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 ID +E D+ T I+ E + G +FL+ ++ RKKP++ + Sbjct: 189 K--ADLNEIDFIEDAANDDYTRVILCYIEDIVDGR------RFLEVASEAARKKPVIVYK 240 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKIN 273 +G + R ++G E N Sbjct: 241 SGISQSGARAASSHTGALAGSDLAYETAFN 270 >gi|312902057|ref|ZP_07761318.1| putative membrane protein FdrA [Enterococcus faecalis TX0470] gi|311290839|gb|EFQ69395.1| putative membrane protein FdrA [Enterococcus faecalis TX0470] Length = 519 Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ IG+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFMMGPDCGTAIIN----GIGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ + DE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|117927728|ref|YP_872279.1| CoA-binding domain-containing protein [Acidothermus cellulolyticus 11B] gi|117648191|gb|ABK52293.1| CoA-binding domain protein [Acidothermus cellulolyticus 11B] Length = 911 Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 10/128 (7%) Query: 123 RLIGPNCPGI--LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNC GI + P+ ++ G + ++S+SG + A+ ++ G+G +T Sbjct: 326 RLIGPNCMGIANIDPEISLNATFCATMPPPGGISLMSQSGAVGIAALNHAARSGVGLATF 385 Query: 181 VGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + G V G DVL + +D T + E G+ +F + + G+ KPI Sbjct: 386 ISAGNKADVSGN---DVLCAWESDPRTRVCALYLESFGNPR----KFARIARRVGKAKPI 438 Query: 240 VGFVAGKT 247 V AG+T Sbjct: 439 VAVKAGRT 446 >gi|260598965|ref|YP_003211536.1| hypothetical protein CTU_31730 [Cronobacter turicensis z3032] gi|260218142|emb|CBA32955.1| Uncharacterized protein yfiQ [Cronobacter turicensis z3032] Length = 887 Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 15/141 (10%) Query: 123 RLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 RL+GPN G+L P P I RKG + +S+S ++ + Q LG S + Sbjct: 121 RLLGPNSLGLLAPWQGLNASFSPVPI-RKGKLAFISQSAAVSNTILDWAQQRQLGFSWFI 179 Query: 182 GIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + GD + IDV EL +LA D T +I++ E +A +F+ R KP Sbjct: 180 AL-GDSLD----IDVDELLDYLARDSKTSAILLYLE----HLSDARRFVSAARSASRNKP 230 Query: 239 IVGFVAGKTAPPGRTMG-HAG 258 I+ +G++ R + HAG Sbjct: 231 ILVIKSGRSPSARRLLNTHAG 251 >gi|1666881|gb|AAB18748.1| succinyl-CoA synthetase alpha subunit [Rattus norvegicus] Length = 65 Score = 42.7 bits (99), Expect = 0.063, Method: Composition-based stats. Identities = 18/30 (60%), Positives = 24/30 (80%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILY 31 +I + KNTKV+ QG TGK GTFH++QA+ Y Sbjct: 33 NIYIXKNTKVICQGFTGKQGTFHSQQALEY 62 >gi|149184352|ref|ZP_01862670.1| hypothetical protein ED21_26578 [Erythrobacter sp. SD-21] gi|148831672|gb|EDL50105.1| hypothetical protein ED21_26578 [Erythrobacter sp. SD-21] Length = 29 Score = 42.7 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 20/27 (74%), Positives = 22/27 (81%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQ 27 MSILVDKNTKV+ QG+TG GTF T Q Sbjct: 1 MSILVDKNTKVITQGMTGNTGTFQTRQ 27 >gi|94313287|ref|YP_586496.1| hypothetical protein Rmet_4362 [Cupriavidus metallidurans CH34] gi|93357139|gb|ABF11227.1| conserved hypothetical protein with a putative CoA binding domain [Cupriavidus metallidurans CH34] Length = 709 Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 80/185 (43%), Gaps = 26/185 (14%) Query: 118 EKSSSRLIGPNCPGIL-TPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 K + RL+GPN G TP + C P + KG + S+SG + + + + Sbjct: 369 RKHNIRLMGPNIYGFYYTPKNLCATFCTPYDV--KGKAALSSQSGGIGMAIIGFSRSAKM 426 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S VG+G + D+L F D+ TE I E ++ F + + + Sbjct: 427 GVSAIVGLGNK--SDIDEDDLLTFFEQDDNTEIIAQHCE----DLKDGRSFAEVARRVSK 480 Query: 236 KKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARIGRS 292 KKP+V AG+T+ R H GA+ DKI + K+AG+ A RS Sbjct: 481 KKPVVVLKAGRTSLGARAASSHTGAL------AGNDKIYEDVFKQAGVIRA-------RS 527 Query: 293 LVELL 297 L +LL Sbjct: 528 LRDLL 532 >gi|194429588|ref|ZP_03062108.1| bacterial FdrA protein [Escherichia coli B171] gi|194412385|gb|EDX28687.1| bacterial FdrA protein [Escherichia coli B171] gi|323160870|gb|EFZ46795.1| protein fdrA [Escherichia coli E128010] Length = 555 Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 17/157 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGIL---TPDSCKIGIMPGSIFRKGSVG 154 ++ ++ + + D +++K R + ++GP+C + TP + +MP +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFA-NVMP-----EGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ ADE +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 V + EA + A + KP V G T Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYT 290 >gi|320197010|gb|EFW71629.1| Protein fdrA [Escherichia coli WV_060327] Length = 555 Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + E + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAETVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|331681912|ref|ZP_08382545.1| protein FdrA [Escherichia coli H299] gi|331081114|gb|EGI52279.1| protein FdrA [Escherichia coli H299] Length = 555 Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + E + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAETVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|301061906|ref|ZP_07202636.1| CoA binding domain protein [delta proteobacterium NaphS2] gi|300444010|gb|EFK08045.1| CoA binding domain protein [delta proteobacterium NaphS2] Length = 458 Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust. Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 22/224 (9%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD-------MVRVKARLEKSSSRL 124 + +++ VP S + E A + IV IT G +D + ++ + Sbjct: 66 DLAIVVVPASLVAGVLKECAAARVKGIVLITAGFKEIDDPAGAVLHEEIAEIANQAKIPV 125 Query: 125 IGPNCPGILTPDS-CKIGIMPG-SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 IGPN G++ + P S+ G + ++S+SG +++ F +G+G S VG Sbjct: 126 IGPNTFGMVNLRAKLNASFTPEFSMANPGDIALVSQSGGISHLLGFLAMGDGVGFSKIVG 185 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G +F + + + D T +I + E ++ + L + KKPIV F Sbjct: 186 LGNR--LNVDFAQMADYLMDDPDTRAIALYVE----GIDDPGELLAAAKRHAGKKPIVAF 239 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKI--NAMKEAGICIAP 284 +G ++G A A G +I +A K+AGI P Sbjct: 240 KSGSG-----SVGDAAARSHTGTMAGRHEIYSHAFKQAGILTVP 278 >gi|91209592|ref|YP_539578.1| membrane protein FdrA [Escherichia coli UTI89] gi|117622774|ref|YP_851687.1| membrane protein FdrA [Escherichia coli APEC O1] gi|218557428|ref|YP_002390341.1| membrane protein FdrA [Escherichia coli S88] gi|91071166|gb|ABE06047.1| putative transport protein FdrA [Escherichia coli UTI89] gi|115511898|gb|ABI99972.1| putative transport protein FdrA [Escherichia coli APEC O1] gi|218364197|emb|CAR01862.1| putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli S88] gi|294490623|gb|ADE89379.1| bacterial FdrA protein [Escherichia coli IHE3034] gi|307628013|gb|ADN72317.1| membrane protein FdrA [Escherichia coli UM146] gi|315289982|gb|EFU49372.1| membrane protein FdrA [Escherichia coli MS 110-3] gi|323952871|gb|EGB48739.1| FdrA protein [Escherichia coli H252] gi|323958520|gb|EGB54225.1| FdrA protein [Escherichia coli H263] Length = 555 Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + E + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAETVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|218688376|ref|YP_002396588.1| membrane protein FdrA [Escherichia coli ED1a] gi|331656574|ref|ZP_08357536.1| protein FdrA [Escherichia coli TA206] gi|218425940|emb|CAR06746.1| putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli ED1a] gi|222032308|emb|CAP75047.1| Protein fdrA [Escherichia coli LF82] gi|312945093|gb|ADR25920.1| membrane protein FdrA [Escherichia coli O83:H1 str. NRG 857C] gi|323191185|gb|EFZ76449.1| protein fdrA [Escherichia coli RN587/1] gi|331054822|gb|EGI26831.1| protein FdrA [Escherichia coli TA206] Length = 555 Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + E + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAETVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|256783952|ref|ZP_05522383.1| hypothetical protein SlivT_05646 [Streptomyces lividans TK24] Length = 714 Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 74/177 (41%), Gaps = 29/177 (16%) Query: 118 EKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 E+ RL+GPN G + D C P + KG V + S+SG + + Sbjct: 370 ERHGVRLLGPNIYGYYSTWQDLCATFCTPYDV--KGGVALTSQSGGIGMAILGFARTTKT 427 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-----E 230 G S VG+G + D+L F D TE I M + LKD E Sbjct: 428 GVSAIVGLGNK--SDLDEDDLLTWFGEDPHTECIAM-----------HLEDLKDGRAFVE 474 Query: 231 AKRGR--KKPIVGFVAGKTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGICIAP 284 A R +KP+V AG+TA + G H GA+ G D I +++AG+ AP Sbjct: 475 AARATVPRKPVVVLKAGRTAAGAKAAGSHTGAL--AGDDAVYDDI--LRQAGVIRAP 527 >gi|110640778|ref|YP_668506.1| membrane protein FdrA [Escherichia coli 536] gi|191172279|ref|ZP_03033821.1| bacterial FdrA protein [Escherichia coli F11] gi|300997004|ref|ZP_07181613.1| membrane protein FdrA [Escherichia coli MS 200-1] gi|110342370|gb|ABG68607.1| FdrA protein [Escherichia coli 536] gi|190907378|gb|EDV66975.1| bacterial FdrA protein [Escherichia coli F11] gi|300304363|gb|EFJ58883.1| membrane protein FdrA [Escherichia coli MS 200-1] gi|324010609|gb|EGB79828.1| membrane protein FdrA [Escherichia coli MS 60-1] Length = 555 Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + E + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAETVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|218553082|ref|YP_002385995.1| membrane protein FdrA [Escherichia coli IAI1] gi|218359850|emb|CAQ97392.1| putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli IAI1] Length = 555 Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 17/157 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGIL---TPDSCKIGIMPGSIFRKGSVG 154 ++ ++ + + D +++K R + ++GP+C + TP + +MP +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFA-NVMP-----EGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ ADE +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 V + EA + A + KP V G T Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYT 290 >gi|289767834|ref|ZP_06527212.1| acyl-CoA synthetase [Streptomyces lividans TK24] gi|289698033|gb|EFD65462.1| acyl-CoA synthetase [Streptomyces lividans TK24] Length = 715 Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 74/177 (41%), Gaps = 29/177 (16%) Query: 118 EKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 E+ RL+GPN G + D C P + KG V + S+SG + + Sbjct: 371 ERHGVRLLGPNIYGYYSTWQDLCATFCTPYDV--KGGVALTSQSGGIGMAILGFARTTKT 428 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-----E 230 G S VG+G + D+L F D TE I M + LKD E Sbjct: 429 GVSAIVGLGNK--SDLDEDDLLTWFGEDPHTECIAM-----------HLEDLKDGRAFVE 475 Query: 231 AKRGR--KKPIVGFVAGKTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGICIAP 284 A R +KP+V AG+TA + G H GA+ G D I +++AG+ AP Sbjct: 476 AARATVPRKPVVVLKAGRTAAGAKAAGSHTGAL--AGDDAVYDDI--LRQAGVIRAP 528 >gi|218688193|ref|YP_002396405.1| putative enzyme with acyl-CoA domain [Escherichia coli ED1a] gi|218425757|emb|CAR06561.1| putative enzyme with acyl-CoA domain [Escherichia coli ED1a] Length = 436 Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust. Identities = 46/193 (23%), Positives = 93/193 (48%), Gaps = 13/193 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ +++ ++ + V D + +K Sbjct: 22 YATIASAKKYIPESNLAVISVNGLFAAREARQALQNDLNVML-FSDNVSVEDELALKQLA 80 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 81 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 137 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 138 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 193 Query: 234 GRKKPIVGFVAGK 246 +KP+V G+ Sbjct: 194 ACRKPVVACFLGR 206 >gi|306813019|ref|ZP_07447212.1| membrane protein FdrA [Escherichia coli NC101] gi|305853782|gb|EFM54221.1| membrane protein FdrA [Escherichia coli NC101] gi|315300611|gb|EFU59839.1| membrane protein FdrA [Escherichia coli MS 16-3] Length = 555 Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + E + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAETVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|227884474|ref|ZP_04002279.1| membrane protein FdrA [Escherichia coli 83972] gi|300987782|ref|ZP_07178358.1| membrane protein FdrA [Escherichia coli MS 45-1] gi|301049728|ref|ZP_07196674.1| membrane protein FdrA [Escherichia coli MS 185-1] gi|227838560|gb|EEJ49026.1| membrane protein FdrA [Escherichia coli 83972] gi|300298516|gb|EFJ54901.1| membrane protein FdrA [Escherichia coli MS 185-1] gi|300407638|gb|EFJ91176.1| membrane protein FdrA [Escherichia coli MS 45-1] gi|307552420|gb|ADN45195.1| involved in protein transport [Escherichia coli ABU 83972] gi|315294308|gb|EFU53659.1| membrane protein FdrA [Escherichia coli MS 153-1] Length = 555 Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + E + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAETVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|237707482|ref|ZP_04537963.1| membrane protein FdrA [Escherichia sp. 3_2_53FAA] gi|226898692|gb|EEH84951.1| membrane protein FdrA [Escherichia sp. 3_2_53FAA] Length = 555 Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + E + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAETVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|239906640|ref|YP_002953381.1| CoA-binding domain protein [Desulfovibrio magneticus RS-1] gi|239796506|dbj|BAH75495.1| CoA-binding domain protein [Desulfovibrio magneticus RS-1] Length = 701 Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 7/138 (5%) Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPNC G+++ KGS+ S+SG L + E +G S V + Sbjct: 130 MVGPNCLGLISTHDNNNASFAAGYPEKGSIAFFSQSGALCTAILDWALGENVGFSKFVSL 189 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G V ++LE D T V++G I E A F++ AK ++KP++ Sbjct: 190 GNKAVINEG--NMLEYLRTDPNTS--VILGYIENV--EHGADFIEQAAKVTQEKPVIMIK 243 Query: 244 AGKTAPPGRTM-GHAGAV 260 +G T + H GA+ Sbjct: 244 SGTTTAGAKAASSHTGAI 261 >gi|324010023|gb|EGB79242.1| membrane protein FdrA [Escherichia coli MS 57-2] Length = 555 Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + E + A + KP V Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK----PPAETVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|312970613|ref|ZP_07784794.1| protein fdrA [Escherichia coli 1827-70] gi|310337262|gb|EFQ02400.1| protein fdrA [Escherichia coli 1827-70] Length = 555 Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 11/159 (6%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILS 157 ++ ++ + + D +++K R + ++GP+C + + + ++ +G++G++ Sbjct: 144 VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTL---LAFANVMPEGNIGVIG 200 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVG 213 SGT E Q + G G + A+G+GG V G + LE+ ADE +E + V Sbjct: 201 ASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVS 260 Query: 214 EIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 + EA + A + KP V G T R Sbjct: 261 K----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|48477608|ref|YP_023314.1| acyl-CoA synthetase [Picrophilus torridus DSM 9790] gi|48430256|gb|AAT43121.1| acyl-CoA synthetase [Picrophilus torridus DSM 9790] Length = 657 Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 19/198 (9%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRLI 125 + +++ VP D I ++I++ + IT G D R+K+ KS R + Sbjct: 66 DLAIVAVPRDSVPDVIQDAIDSGTGAAIIITSGFKETDQHGAELEERIKSMASKSGLRFL 125 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 GPN GI+TP G S KG ++++SG L + + G S V +G Sbjct: 126 GPNTIGIITPSFN--GTFAFSDNIKGGAALVAQSGGLGVYMLNWAQKTRTGISYFVSLGN 183 Query: 186 D-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 +K + D+ E D T++I E G ++ +A FL + +KKP++ F+ Sbjct: 184 QTDIKES---DIFEFLANDVETKAIFSYLE--GVSDGDA--FLNTVPEVTKKKPLI-FLK 235 Query: 245 GKTAPPGRTM--GHAGAV 260 G T G H G+V Sbjct: 236 GGTGKSGTAAIKTHTGSV 253 >gi|18313937|ref|NP_560604.1| hypothetical protein PAE3250 [Pyrobaculum aerophilum str. IM2] gi|18161508|gb|AAL64786.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2] Length = 461 Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 12/181 (6%) Query: 109 DMVRVKARLEKSSSRLIGPNCPGILTPDS-CKIGIMPGSIFRK---GSVGILSRSGTLTY 164 + VR AR + R++GPNC GI S +P + G + ++S+SG + Sbjct: 113 NWVRAVAR--QYGIRVLGPNCIGIYNAYSNFDTVFLPADRAGRPPPGPLALISQSGAVAA 170 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 + ++ LG G + TE I++LE F D+ + I + E G EA Sbjct: 171 AIMDWAARRRLGLGFMANYG-NKADVTE-IELLEAFANDDRVKVITVYIE-GFKYFGEAR 227 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 +FL+ K KKPIV + AG+ + R + A ++G E K+AGI A Sbjct: 228 RFLETARKVAVKKPIVAYKAGRGSAAQRAVRSHTAAMAGTY---EMYHGLFKQAGIIEAS 284 Query: 285 S 285 S Sbjct: 285 S 285 >gi|21224882|ref|NP_630661.1| hypothetical protein SCO6582 [Streptomyces coelicolor A3(2)] gi|3288603|emb|CAA19775.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)] Length = 714 Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 74/177 (41%), Gaps = 29/177 (16%) Query: 118 EKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 E+ RL+GPN G + D C P + KG V + S+SG + + Sbjct: 370 ERHGVRLLGPNIYGYYSTWQDLCATFCTPYDV--KGGVALTSQSGGIGMAILGFARTTKT 427 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-----E 230 G S VG+G + D+L F D TE I M + LKD E Sbjct: 428 GVSAIVGLGNK--SDLDEDDLLTWFGEDPHTECIAM-----------HLEDLKDGRAFVE 474 Query: 231 AKRGR--KKPIVGFVAGKTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGICIAP 284 A R +KP+V AG+TA + G H GA+ G D I +++AG+ AP Sbjct: 475 AARATVPRKPVVVLKAGRTAAGAKAAGSHTGAL--AGDDAVYDDI--LRQAGVIRAP 527 >gi|281177690|dbj|BAI54020.1| conserved hypothetical protein [Escherichia coli SE15] Length = 555 Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ DE +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSVDEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AGKTAPPGR 252 G T R Sbjct: 287 LGYTPAVAR 295 >gi|126460459|ref|YP_001056737.1| CoA-binding domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126250180|gb|ABO09271.1| CoA-binding domain protein [Pyrobaculum calidifontis JCM 11548] Length = 472 Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 7/138 (5%) Query: 113 VKARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 VKA ++ RL+GPNC G+ D+ + + G + ++S+SG + + Sbjct: 125 VKAVAKQYGIRLLGPNCIGVYNAYTNFDTQFLPVERAGRPPPGPIALISQSGAVATAIMD 184 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ LG V G+ TE +++LE F DE + I M E G EA + L Sbjct: 185 WAARRRLGMGFVVNY-GNKADVTE-VELLEAFAEDERVKVITMYME-GLKYPGEAKRLLD 241 Query: 229 DEAKRGRKKPIVGFVAGK 246 + KKPIV + AG+ Sbjct: 242 TVRRIAPKKPIVVYKAGR 259 >gi|218884157|ref|YP_002428539.1| Acetyl-CoA synthetase [Desulfurococcus kamchatkensis 1221n] gi|218765773|gb|ACL11172.1| Acetyl-CoA synthetase [Desulfurococcus kamchatkensis 1221n] Length = 471 Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 14/176 (7%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGP 127 + +++ VP + I ES + + V IT G + V ++ ++ K R++GP Sbjct: 77 DVAIVTVPADNVPEVIEESGRKGVKVAVVITSGFSEVGNVELENKIVETARKYGMRILGP 136 Query: 128 NCPG-ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 N G + TP + P + R GS+ ++S+SG L + T +G S + +G Sbjct: 137 NIFGYVYTPSNINATFGPLEVAR-GSIALISQSGALGIALMGWTIMNEIGLSALLSVG-- 193 Query: 187 PVKGTEFIDVLEL--FLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +DV EL +LAD+ ++ + + G +F+K + KKP+V Sbjct: 194 ---NMADLDVAELSEYLADDPNTRVITI-YLEGIKPGRGGEFIKKMREVTLKKPVV 245 >gi|110640602|ref|YP_668330.1| YahF/FdrA-like protein [Escherichia coli 536] gi|191173577|ref|ZP_03035103.1| bacterial FdrA protein [Escherichia coli F11] gi|300977143|ref|ZP_07173759.1| bacterial FdrA protein [Escherichia coli MS 200-1] gi|110342194|gb|ABG68431.1| YahF/FdrA-like protein [Escherichia coli 536] gi|190906172|gb|EDV65785.1| bacterial FdrA protein [Escherichia coli F11] gi|300308395|gb|EFJ62915.1| bacterial FdrA protein [Escherichia coli MS 200-1] gi|324010945|gb|EGB80164.1| bacterial FdrA protein [Escherichia coli MS 60-1] Length = 515 Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust. Identities = 46/193 (23%), Positives = 92/193 (47%), Gaps = 13/193 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKYIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGK 246 +KP+V G+ Sbjct: 273 ACRKPVVACFLGR 285 >gi|320197223|gb|EFW71839.1| Putative oxidoreductase subunit [Escherichia coli WV_060327] Length = 515 Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust. Identities = 46/193 (23%), Positives = 92/193 (47%), Gaps = 13/193 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKYIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGK 246 +KP+V G+ Sbjct: 273 ACRKPVVACFLGR 285 >gi|150388522|ref|YP_001318571.1| FdrA family protein [Alkaliphilus metalliredigens QYMF] gi|149948384|gb|ABR46912.1| FdrA family protein [Alkaliphilus metalliredigens QYMF] Length = 525 Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust. Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 11/187 (5%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 A K + AN ++ +P A D + +++ +I ++ ++ + + D R+K ++ Sbjct: 106 AALKYQLDANLVLVSIPGEYAFDEVEKALHQDIH-VMLFSDQMSMADERRLKEIAKERQL 164 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C T ++ + ++ RKG++GI+ SGT E + G G S +G Sbjct: 165 LMMGPDCG---TAIINQVPLAFANVVRKGNIGIVGASGTGIQEVSILIHRLGEGVSQVIG 221 Query: 183 IGGDPVK----GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 GG +K G +E D T IV+ I +EE A+ + K Sbjct: 222 TGGRDLKKEIGGIMMQQGIEALQNDPETGVIVL---ISKPPDEEVAERVLALIAHSEKPV 278 Query: 239 IVGFVAG 245 +V F+ G Sbjct: 279 VVNFIGG 285 >gi|226366206|ref|YP_002783989.1| acetate--CoA ligase [Rhodococcus opacus B4] gi|226244696|dbj|BAH55044.1| putative acetate--CoA ligase [Rhodococcus opacus B4] Length = 891 Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 18/189 (9%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV--LDMVRVKARLEKSSS----RLI 125 + +V+ VP + + ++ + +V ++ G +D + + RL ++ RLI Sbjct: 271 DLAVVAVPAESINAVLDDCLDKGVKALVVVSSGFSETGMDGRQSERRLVHAARAHGMRLI 330 Query: 126 GPNCPGILTPD---SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 GPN G+ D S + P + G+VG +SG L + + ++ +G S V Sbjct: 331 GPNALGVANNDRDVSLNATLAP-VLPSPGNVGFFCQSGALGIAILDEAARSRIGLSAFVS 389 Query: 183 IGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G V G D+L+ + +D ATE +++ E G+ +F + + R KPIV Sbjct: 390 AGNRADVSGN---DLLQYWDSDPATEVVLLYLESFGNPR----KFSRIARRVARNKPIVA 442 Query: 242 FVAGKTAPP 250 +G+ A P Sbjct: 443 VKSGRHAVP 451 >gi|111023770|ref|YP_706742.1| acetyl-CoA synthetase [Rhodococcus jostii RHA1] gi|110823300|gb|ABG98584.1| possible acetyl-CoA synthetase [Rhodococcus jostii RHA1] Length = 920 Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 10/131 (7%) Query: 123 RLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPN G+ DS + + G+VG +SG L + + ++ +G S Sbjct: 357 RLIGPNALGVANNDSEVSLNATLAPVLPSPGNVGFFCQSGALGIAILDEAARSRIGLSAF 416 Query: 181 VGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V G V G D+L+ + +D ATE +++ E G+ +F + + R KPI Sbjct: 417 VSAGNRADVSGN---DLLQYWDSDPATEVVLLYLESFGNPR----KFSRIARRVARNKPI 469 Query: 240 VGFVAGKTAPP 250 V +G+ A P Sbjct: 470 VAVKSGRHAVP 480 >gi|159111022|ref|XP_001705744.1| Acetyl-CoA synthetase [Giardia lamblia ATCC 50803] gi|5514636|gb|AAD44021.1|AF107206_1 acetyl-CoA synthetase [Giardia intestinalis] gi|157433833|gb|EDO78070.1| Acetyl-CoA synthetase [Giardia lamblia ATCC 50803] Length = 726 Score = 42.4 bits (98), Expect = 0.085, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 16/173 (9%) Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL--DMVRVKARLEK----SSSRLIGPN 128 ++ +P A E + ++ +V IT G + + V+++ L K + RL+GPN Sbjct: 83 IVVIPSKAVLAAAKECAQKKVKSLVVITAGFKEIGGEGVQMEQDLTKICKDAGIRLVGPN 142 Query: 129 CPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 C GI+TP+ +C S KGS+ LS+SG + + G+G S + +G Sbjct: 143 CLGIVTPNLNCTFASAKPS---KGSIAFLSQSGAMLTSILDWALTNGIGFSNFISLGNK- 198 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 + +D++ D T+ I++ E + + +FL+ KKP++ Sbjct: 199 -ADVDEVDLIMEVAEDPNTDIILLYLE----SIVDGRKFLEQIPTCVHKKPVI 246 >gi|209885939|ref|YP_002289796.1| N-acetyltransferase [Oligotropha carboxidovorans OM5] gi|209874135|gb|ACI93931.1| N-acetyltransferase [Oligotropha carboxidovorans OM5] Length = 898 Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 22/181 (12%) Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS---RLIGPNCPG 131 VI P + D I E E V IT GI + +R +A L+ S R+IGPN G Sbjct: 74 VIITPAAVVPDLIKELGEKGTRAAVVITAGITRENGLR-QAILDASKPHLLRIIGPNTLG 132 Query: 132 ILTP------DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 ++ P +G PG+I +LS+SG + + + G+G S V +G Sbjct: 133 LVLPLAKLNASFAHMGAAPGNI------ALLSQSGAIATSLIDWAAANGIGFSQIVSLGD 186 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 + + D L + D T +IVM E + +F+ R KP++ G Sbjct: 187 --MADVDVADCLNMLAGDAQTRAIVMYLE----SVPNPRKFMTAARAAARVKPVIAIKPG 240 Query: 246 K 246 + Sbjct: 241 R 241 >gi|168231526|ref|ZP_02656584.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472717|ref|ZP_03078701.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194459081|gb|EDX47920.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205334154|gb|EDZ20918.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 554 Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust. Identities = 38/186 (20%), Positives = 86/186 (46%), Gaps = 12/186 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +++ V A + ++++ + +++ ++ + + D +R+K R ++GP+C Sbjct: 118 ANLALVSVAGEYAAELAEQALDRSLNVMI-FSDNVTLDDEIRLKRRARDKGLLVMGPDCG 176 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP--- 187 + ++ + ++ +G++G++ SGT E Q + G G + +G+GG Sbjct: 177 TAMIANT---PLAFANVIPEGNIGVIGASGTGIQELCSQIALAGEGITHTIGLGGRDLSA 233 Query: 188 -VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 V G + L++ ADE ++ + V + A + A + KP+V G Sbjct: 234 EVGGISALTALDILSADEKSQVLAFVSKPPADAVRQHII----AAMKATGKPVVALFLGF 289 Query: 247 TAPPGR 252 ++P R Sbjct: 290 SSPVAR 295 >gi|260893545|ref|YP_003239642.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Ammonifex degensii KC4] gi|260865686|gb|ACX52792.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Ammonifex degensii KC4] Length = 699 Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 11/159 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RL+GPNC G++ + KG + +S+SG + + + +EG+G S V Sbjct: 125 RLLGPNCVGVMDTHTPLNASFAAGFPHKGEIAFISQSGAMLVAILDWSMREGIGFSQFVS 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + D++E D T+ I+ E +E +FL+ + R+KP+V Sbjct: 185 MGNK--ADLDETDLIEAAANDPHTKVILCYLE----DIKEGQRFLEVAERVTREKPVVVL 238 Query: 243 VAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGI 280 +G + + H GA+ G A D A ++AG+ Sbjct: 239 KSGVSEAGAKAASSHTGAL--AGSNIAYDA--AFRQAGV 273 >gi|269836565|ref|YP_003318793.1| CoA-binding domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269785828|gb|ACZ37971.1| CoA-binding domain protein [Sphaerobacter thermophilus DSM 20745] Length = 743 Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 17/168 (10%) Query: 118 EKSSSRLIGPNCPG-ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ R++GPNC G I P+ +G + + +SG L Y V G+G Sbjct: 143 RRTGIRVVGPNCLGNISVPNRMVASSGAYPPLNRGPIALALQSGLLAYSLVLPAHDRGIG 202 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 + V +G + + +D++ +L DE T I E + + L + A+R Sbjct: 203 FTYVVTLGNE--ADIDVVDMIRYYLDDEETRVIGCFVE-----QFRRLERLLEMAERAAD 255 Query: 237 --KPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINA-MKEAGI 280 KPIV G++ R + H G+++ G+++ ++A M++ GI Sbjct: 256 LGKPIVVLKVGRSEAGRRAALAHTGSLV-----GSDEIVDAVMRQHGI 298 >gi|254173177|ref|ZP_04879850.1| AcdA-4 acetate--coA ligase (ADP-forming) , alpha chain [Thermococcus sp. AM4] gi|214032586|gb|EEB73415.1| AcdA-4 acetate--coA ligase (ADP-forming) , alpha chain [Thermococcus sp. AM4] Length = 445 Score = 42.4 bits (98), Expect = 0.090, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 7/123 (5%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +K R+IGPNC GI G + + G + ++S+SG A+ + EG+G Sbjct: 117 KKHGVRVIGPNCAGIFGVHGKFFGSFEVRV-KPGGLALISQSGAFGGAALAMGNDEGIGF 175 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V G D LE F DE T++I + E ++ +FLK +K Sbjct: 176 SAFVSYGN--ASDLNESDFLEYFADDENTKAIALYIE----GVKDGRRFLKALRYASERK 229 Query: 238 PIV 240 P++ Sbjct: 230 PVI 232 >gi|271966183|ref|YP_003340379.1| acyl-CoA synthetase (NDP forming)-like protein [Streptosporangium roseum DSM 43021] gi|270509358|gb|ACZ87636.1| Acyl-CoA synthetase (NDP forming)-like protein [Streptosporangium roseum DSM 43021] Length = 883 Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 10/131 (7%) Query: 118 EKSSSRLIGPNCPGIL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ RL+GPNC GI+ T G +P G + ++S+SG + + + + +G Sbjct: 304 REAGMRLVGPNCLGIVNTAARLNAGFLPHPPA-PGRLALMSQSGAVAVALIDRANHLEIG 362 Query: 177 QSTAVGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 S+ +G V G D+LE + D AT+ I + E G+ +F + + R Sbjct: 363 ISSFASVGNKADVSGN---DLLEYWEDDPATDVITLYLESFGNPR----RFGRIARRVSR 415 Query: 236 KKPIVGFVAGK 246 +KPI+ +G+ Sbjct: 416 RKPIIAIKSGR 426 >gi|85858300|ref|YP_460502.1| acetyl-CoA synthetase subunit beta [Syntrophus aciditrophicus SB] gi|85721391|gb|ABC76334.1| acetyl-CoA synthetase beta subunit [Syntrophus aciditrophicus SB] Length = 700 Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 10/97 (10%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRK----GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R IGPNC G + D +MP +++ G VGI+S+SG + + + + + Sbjct: 124 RFIGPNCIGAVNYDLNL--LMPFLLYKNTLPGGRVGIISQSGGIGHYYLEHLPENSVRPG 181 Query: 179 TAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGE 214 V IG + T+F LE FL DE T+ +++ E Sbjct: 182 KMVSIGNKLQIDETDF---LEYFLEDEHTDQVIIYLE 215 >gi|114761144|ref|ZP_01441059.1| CoA-binding protein [Pelagibaca bermudensis HTCC2601] gi|114545392|gb|EAU48394.1| CoA-binding protein [Roseovarius sp. HTCC2601] Length = 701 Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 56/133 (42%), Gaps = 16/133 (12%) Query: 123 RLIGPNCPGILTPDS----CKIGIMPGSIFRKGSVGILSRSGTLT-YEAVFQTSQEGLGQ 177 RL+GPNC G++ + G KG V +L SG L +++ Q GLG Sbjct: 131 RLMGPNCNGLINYVDGFALTSTATINGPRAPKGDVAVLGHSGGLAQVNVMYRAQQAGLGI 190 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEI---GGSAEEEAAQFLKDEAKRG 234 S V G D + +D + D T I+M+ E GG + L D A R Sbjct: 191 SYQVSCGND--ADLDILDYAAFMVDDPETRVILMLAETIRDGGK-----LRALSDRA-RA 242 Query: 235 RKKPIVGFVAGKT 247 KPIV G++ Sbjct: 243 ADKPIVMMKLGRS 255 >gi|318081425|ref|ZP_07988757.1| putative acyl-CoA synthetase [Streptomyces sp. SA3_actF] Length = 657 Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 20/195 (10%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVR 112 VP F TV E E + +V+ VP +A+ E E + +V I+ G R Sbjct: 290 VPAFRTVKEIGEDV--DLAVVVVPAERVPEAVAECGEHGVRGLVVISAGYGESVTAGRAR 347 Query: 113 VKARLEKSSS---RLIGPNCPGILTPDSC---KIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + + ++ S RL+GPN G++ D + P + +G VG+ ++SG + Sbjct: 348 QRRLVRQARSYGMRLVGPNAFGLVNTDPAVRLNASLAP-ELAPRGRVGLFTQSGAIGIAL 406 Query: 167 VFQTSQEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + + Q G G ST V G V G DVL+ + D T+ +M E G+ + Sbjct: 407 LSELHQRGTGLSTFVSAGNRADVSGN---DVLQYWYDDPDTDVALMYLESIGNPR----K 459 Query: 226 FLKDEAKRGRKKPIV 240 F + + KP+V Sbjct: 460 FTRLARRAAATKPLV 474 >gi|320160964|ref|YP_004174188.1| putative acetyl-CoA synthetase [Anaerolinea thermophila UNI-1] gi|319994817|dbj|BAJ63588.1| putative acetyl-CoA synthetase [Anaerolinea thermophila UNI-1] Length = 701 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 7/144 (4%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 K RL+GPNC G + S + KG +G LS+SG + V + +G Sbjct: 121 HKYGMRLVGPNCVGTMDLYSGLNTTFIHGVPEKGHIGFLSQSGAICGGIVDYVRGKHIGF 180 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V +G + TE D++E D T I + E A ++ ++F+ + + K Sbjct: 181 SNFVSLGNE-ADVTE-TDMIEYLADDPDTRVIALYVE----AIKDGSRFMGVCEQVAKSK 234 Query: 238 PIVGFVAGKTAPPGRTM-GHAGAV 260 PIV AGKT + + H G++ Sbjct: 235 PIVLLKAGKTQAGAKAVSSHTGSI 258 >gi|312970410|ref|ZP_07784591.1| bacterial FdrA family protein [Escherichia coli 1827-70] gi|310337059|gb|EFQ02197.1| bacterial FdrA family protein [Escherichia coli 1827-70] Length = 515 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 103/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE I ++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|85859901|ref|YP_462103.1| acetyl-CoA synthetase [Syntrophus aciditrophicus SB] gi|85722992|gb|ABC77935.1| acetyl-CoA synthetase [Syntrophus aciditrophicus SB] Length = 482 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 32/182 (17%) Query: 112 RVKARLEKSSSRLIGPNCPGI----------LTPDSCKIGIMPGSIFRKGSVGILSRSGT 161 R++ ++ +IGPN G T + C++ KG V I+S+SG Sbjct: 134 RIRKICDQYEMPIIGPNTSGFANIAFGIDASFTSEFCEL--------EKGGVAIISQSGG 185 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFL-ADEATESIVMVGEIGGSAE 220 L + F + +G S+ + +G G F + + F+ DEAT+ I + E Sbjct: 186 LCHLCGFLALHQRMGVSSLMSLGNRLNVG--FPEAVRFFIEEDEATKVIALYIE----GL 239 Query: 221 EEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEA 278 +E + L D A+ R KKPIV + +GK+A + H G++ G E A ++A Sbjct: 240 DEPRELL-DMARSLRGKKPIVAYKSGKSAKSDSASKFHTGSL----AGNHEIWKGAFRQA 294 Query: 279 GI 280 GI Sbjct: 295 GI 296 >gi|260866489|ref|YP_003232891.1| putative acyl-CoA synthetase [Escherichia coli O111:H- str. 11128] gi|257762845|dbj|BAI34340.1| predicted acyl-CoA synthetase [Escherichia coli O111:H- str. 11128] gi|323178421|gb|EFZ63999.1| bacterial FdrA family protein [Escherichia coli 1180] Length = 515 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 103/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE I ++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|157159834|ref|YP_001457152.1| acyl-CoA synthetase [Escherichia coli HS] gi|193068623|ref|ZP_03049584.1| bacterial FdrA protein [Escherichia coli E110019] gi|260853548|ref|YP_003227439.1| putative acyl-CoA synthetase [Escherichia coli O26:H11 str. 11368] gi|157065514|gb|ABV04769.1| bacterial FdrA protein [Escherichia coli HS] gi|192957986|gb|EDV88428.1| bacterial FdrA protein [Escherichia coli E110019] gi|257752197|dbj|BAI23699.1| predicted acyl-CoA synthetase [Escherichia coli O26:H11 str. 11368] gi|323158127|gb|EFZ44225.1| bacterial FdrA family protein [Escherichia coli EPECa14] Length = 515 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 103/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE I ++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|319785961|ref|YP_004145436.1| CoA-binding protein [Pseudoxanthomonas suwonensis 11-1] gi|317464473|gb|ADV26205.1| CoA-binding domain protein [Pseudoxanthomonas suwonensis 11-1] Length = 904 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 15/158 (9%) Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK---GSVGILSRSGTLT 163 +L+ +R +AR R++GPNC G++ P +G+ R G + ++S+SG + Sbjct: 111 LLEHLRSEAR--PHGLRIVGPNCLGVMAP---HVGLNASFAARSPLPGDLALVSQSGAIA 165 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 V + +G S V +G +F D+L+ F D T +I++ E + +A Sbjct: 166 AGLVEWGAARSIGFSAVVSLGD--ALDVDFGDLLDWFAQDPKTRAILLYIE----SIRDA 219 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG-HAGAV 260 +F+ R KP+V +G+ R H GA+ Sbjct: 220 RKFMSAARAAARSKPVVVIKSGRHEQGARAAATHTGAL 257 >gi|218693780|ref|YP_002401447.1| putative enzyme with acyl-CoA domain [Escherichia coli 55989] gi|300817150|ref|ZP_07097368.1| bacterial FdrA protein [Escherichia coli MS 107-1] gi|309796662|ref|ZP_07691067.1| bacterial FdrA protein [Escherichia coli MS 145-7] gi|218350512|emb|CAU96200.1| putative enzyme with acyl-CoA domain [Escherichia coli 55989] gi|300530126|gb|EFK51188.1| bacterial FdrA protein [Escherichia coli MS 107-1] gi|308119674|gb|EFO56936.1| bacterial FdrA protein [Escherichia coli MS 145-7] gi|320201093|gb|EFW75676.1| Putative oxidoreductase subunit [Escherichia coli EC4100B] Length = 515 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 103/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE I ++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|330834697|ref|YP_004409425.1| CoA-binding domain-containing protein [Metallosphaera cuprina Ar-4] gi|329566836|gb|AEB94941.1| CoA-binding domain-containing protein [Metallosphaera cuprina Ar-4] Length = 660 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 17/194 (8%) Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL--DMVRVKARL----EKSSSRLIGPN 128 V+ VP + + E+ E + + IT G + D R++ L K R +GPN Sbjct: 70 VVSVPRESVKEVMEEAGEKNVKSAIVITSGFREVGEDGERLEKELVEVAHKHGIRFLGPN 129 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD-P 187 G+LTPD G + R+G + ++ +SG + + + G S V +G Sbjct: 130 TMGLLTPDYN--GTFAFADVRRGEIALVVQSGGIGAYMLNWAQRSRTGISFLVSLGNQSD 187 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 V+ E ID L D T++I + E G S E+ Q + D R KP++ G T Sbjct: 188 VREYEIIDYLS---RDPETKAIFVYIE-GISDGEKFLQTMPDATSR---KPVIFIKGGAT 240 Query: 248 APPGRTMG-HAGAV 260 A + H G++ Sbjct: 241 AQSAEAVKTHTGSL 254 >gi|74310907|ref|YP_309326.1| putative oxidoreductase subunit [Shigella sonnei Ss046] gi|73854384|gb|AAZ87091.1| putative oxidoreductase subunit [Shigella sonnei Ss046] Length = 515 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 13/197 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE I ++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPP 250 +KP+V G+ P Sbjct: 273 ACRKPVVVCFLGRVETP 289 >gi|323164121|gb|EFZ49928.1| bacterial FdrA family protein [Shigella sonnei 53G] Length = 515 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 103/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE I ++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|308161477|gb|EFO63922.1| Acetyl-CoA synthetase [Giardia lamblia P15] Length = 715 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 16/173 (9%) Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL--DMVRVKARLEK----SSSRLIGPN 128 ++ +P A E + ++ +V IT G + + V+++ L K + RL+GPN Sbjct: 72 IVVIPSKAVLAAAKECAQKKVKSLVVITAGFKEVGGEGVQMEQDLTKICKDAGIRLVGPN 131 Query: 129 CPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 C GI+TP+ +C S KGS+ LS+SG + + G+G S + +G Sbjct: 132 CLGIVTPNLNCTFASAKPS---KGSIAFLSQSGAMLTSILDWALTNGIGFSNFISLGNK- 187 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 + +D++ D T+ I++ E + + +FL+ KKP++ Sbjct: 188 -ADVDEVDLIMEVAEDPNTDIILLYLE----SIVDGRKFLEQIPTCVHKKPVI 235 >gi|194367674|ref|YP_002030284.1| GCN5-related N-acetyltransferase [Stenotrophomonas maltophilia R551-3] gi|194350478|gb|ACF53601.1| GCN5-related N-acetyltransferase [Stenotrophomonas maltophilia R551-3] Length = 906 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 12/192 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 A AS++ P A ++A I L + +G L +V+A K R++GP+C Sbjct: 77 APASIV---PQVVRTAAERGVQAAIILTAHLGDGPGSLS-AQVEAVARKHGLRILGPHCL 132 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G++ P + + + G + ++S S + V +G S V +G Sbjct: 133 GVIAPHARLNASIAAHFPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLGD--TMD 190 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT--A 248 +F D+L+ F D T +I++ E ++A +F+ R KP+V +G+ Sbjct: 191 VDFGDLLDYFATDYRTRAILLYVE----QIKDARKFMSAARAAARAKPVVVVKSGRAERV 246 Query: 249 PPGRTMGHAGAV 260 PG H A+ Sbjct: 247 QPGSRDTHVQAL 258 >gi|218778225|ref|YP_002429543.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759609|gb|ACL02075.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 709 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 7/144 (4%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +K R +GPNC G+ + + G + I S+SGT + + G+ Sbjct: 125 DKHGIRFLGPNCMGVFNSQYPFNATVTPFQDKPGFLSIASQSGTYLAQTLTYLKYRGVRL 184 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 + A+ +G + +D LE D T++I + E A + +FL+ + R K Sbjct: 185 NQAMSVGNE--ANINIVDCLEYLGEDPKTKAIGLYIE----ALSDPGRFLEVAREVSRVK 238 Query: 238 PIVG-FVAGKTAPPGRTMGHAGAV 260 PIV +V G A + H G++ Sbjct: 239 PIVAQYVGGSKAGAKSGLSHTGSI 262 >gi|317124224|ref|YP_004098336.1| hypothetical protein Intca_1088 [Intrasporangium calvum DSM 43043] gi|315588312|gb|ADU47609.1| protein of unknown function DUF1116 [Intrasporangium calvum DSM 43043] Length = 989 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 14/183 (7%) Query: 51 GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM 110 GG P T+ R AN +++ VP A ++++EA + +++ ++ +PV D Sbjct: 95 GGFGEAPAPRTLGGVLHRVGANLALVSVPGQHATTEALDAVEAGVSVMI-FSDNVPVEDE 153 Query: 111 VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 VR+K+ E+ + ++GP+C G +G ++ R GSVG+++ SGT + + Sbjct: 154 VRLKSIAERRAVLVMGPDC-GTAVVGGVALGF--ANVVRSGSVGVVAASGTGAQQVMCLL 210 Query: 171 SQEGLGQSTAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 G+G S +G+GG V G L AD ATE IV+V ++ AA+ Sbjct: 211 EAAGVGVSHVLGVGGRDLSAAVGGRSTRQALAALAADPATERIVVV------SKPPAAEV 264 Query: 227 LKD 229 L D Sbjct: 265 LSD 267 >gi|285016968|ref|YP_003374679.1| hypothetical protein XALc_0147 [Xanthomonas albilineans GPE PC73] gi|283472186|emb|CBA14693.1| hypothetical protein XALc_0147 [Xanthomonas albilineans] Length = 894 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP+C G++ P + + + G + ++S S + V +G S V Sbjct: 125 RVLGPHCLGVIAPHARLNASIAAHCPQPGDLALVSESSAIAAALVEWGVARAVGFSAVVS 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G +F D+L+ F DE T +I++ E +A +F+ R KP+V Sbjct: 185 LGD--TLDVDFADLLDYFATDERTRAILLYVE----HIRDARKFMSAARAAARAKPVVVV 238 Query: 243 VAGK 246 +G+ Sbjct: 239 KSGR 242 >gi|324998636|ref|ZP_08119748.1| acetyl-CoA synthetase [Pseudonocardia sp. P1] Length = 904 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 18/146 (12%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPD-SCKIG-----IMPGSIFRKGSVGILSRSGTLTYE 165 R+ A R++GPN G+ PD S ++ MPG G G +SG L Sbjct: 328 RLVAEARAHGMRVVGPNALGVANPDPSVRLNATLAPAMPG----PGRTGFFCQSGALGTA 383 Query: 166 AVFQTSQEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 + GLG S+ V G V G D+++ + D T+ +++ E G+ Sbjct: 384 ILANARSRGLGLSSFVSAGNRADVSGN---DLMQYWQTDPGTDQVLLYLESFGNPR---- 436 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTAPP 250 +F + + R KPIV +G+ P Sbjct: 437 KFARVARRLARTKPIVAVKSGRHTGP 462 >gi|117676148|ref|YP_863724.1| hypothetical protein Shewana3_4208 [Shewanella sp. ANA-3] gi|117614972|gb|ABK50425.1| hypothetical protein Shewana3_4208 [Shewanella sp. ANA-3] Length = 431 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 8/132 (6%) Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 ++ + + P ++R G +++ +G + E + S EGL QS ++G D TE +D Sbjct: 185 NTYAVEVAPTMVYRNGG-KVVTATGLQSLEDFVKQS-EGLLQSGSLGKLSDTYDITE-MD 241 Query: 196 VLELFL-----ADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 +LEL D + V E + + LKDE R + P V F +T P Sbjct: 242 MLELIQQKLKKVDWEEKKHEAVSRFVNRKEVQLTESLKDEDVRYKIDPRVRFTQDQTTPD 301 Query: 251 GRTMGHAGAVIS 262 G+ AG V+ Sbjct: 302 GQYFAKAGDVVD 313 >gi|325496415|gb|EGC94274.1| membrane protein FdrA [Escherichia fergusonii ECD227] Length = 555 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVG 154 ++ ++ + + D +++K R + ++GP+C + I P ++ +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDC------GTSMIAATPLAFANVMPEGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ DE +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVCGISALTALEMLSVDEKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|297619719|ref|YP_003707824.1| CoA-binding domain-containing protein [Methanococcus voltae A3] gi|297378696|gb|ADI36851.1| CoA-binding domain protein [Methanococcus voltae A3] Length = 707 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 9/132 (6%) Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L+K R IGPNC G++ +KG++ +S+SG + + + LG Sbjct: 124 LKKYDIRTIGPNCLGVINMHDELNASFSKDFDQKGNIAFISQSGAIMTALMDISIPLNLG 183 Query: 177 QSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 S V +G V+ E +D +LAD+ +V++ G E +F+ Sbjct: 184 YSKIVSMGNKIDVQEDEILD----YLADDEHTDVVVLYVEGLKNE----KFIDSARALSH 235 Query: 236 KKPIVGFVAGKT 247 KKP++ +GK+ Sbjct: 236 KKPVIVLKSGKS 247 >gi|320638495|gb|EFX08206.1| putative acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli O157:H7 str. G5101] Length = 515 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 44/196 (22%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ +++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVILVNGLFAAREARQALQNDLNVML-FSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE I ++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|215485595|ref|YP_002328026.1| membrane protein FdrA [Escherichia coli O127:H6 str. E2348/69] gi|312964414|ref|ZP_07778708.1| protein fdrA [Escherichia coli 2362-75] gi|215263667|emb|CAS07999.1| predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli O127:H6 str. E2348/69] gi|312290891|gb|EFR18767.1| protein fdrA [Escherichia coli 2362-75] Length = 555 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 74/151 (49%), Gaps = 14/151 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGE 214 V G + LE+ ADE +E + V + Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK 261 >gi|289670853|ref|ZP_06491928.1| putative acetyltransferase (GNAT) family protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 514 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 10/136 (7%) Query: 115 ARLEKSSS----RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 AR+E S+ R++GP+C G++ P + + + G + ++S S + V Sbjct: 113 ARMEASARAKGMRILGPHCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWG 172 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 +G S V +G +F D+L+ F D T +I++ E G A +F+ Sbjct: 173 VARSVGFSAVVSLGD--TLDVDFGDLLDYFATDYRTRAILLYVERIGDAR----KFMSAA 226 Query: 231 AKRGRKKPIVGFVAGK 246 R KP+V +G+ Sbjct: 227 RAAARAKPVVVVKSGR 242 >gi|254391073|ref|ZP_05006281.1| acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064] gi|197704768|gb|EDY50580.1| acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064] Length = 650 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 27/216 (12%) Query: 56 VPVFTTVAEAKERT--AANASVIYVPPSGAGDAIIESIEAEIPLIVCIT--------EGI 105 VP F +VAE T A + +V+ VP +A+ + E + +V +T EG Sbjct: 260 VPAFRSVAEIAAATGEAVDLAVVAVPVERVPEAVADCGEHGVRGLVVLTAGYAESGAEGR 319 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGIL-TPDSCKIG--IMPGSIFRKGSVGILSRSGTL 162 + +AR R+IGPN GI+ T D+ ++ + PGS G +G+ ++SG + Sbjct: 320 RRQRELVRRAR--SYGMRIIGPNSLGIISTADAVRLNASLAPGSPA-PGRIGLFTQSGAI 376 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 + + + G G ST + G V G +F L+ + D T+ ++M E G+ Sbjct: 377 GIALLSELHRRGAGLSTFISSGNRADVSGNDF---LQYWYDDPDTDVVLMYLESIGNPR- 432 Query: 222 EAAQFLKDEAKRGRKKPIV---GFVAGKTAPPGRTM 254 +F + + KP+V G + PPG + Sbjct: 433 ---KFTRLARRTAAVKPLVVVKGARHSGSEPPGHAV 465 >gi|297582496|ref|YP_003698276.1| FdrA family protein [Bacillus selenitireducens MLS10] gi|297140953|gb|ADH97710.1| FdrA family protein [Bacillus selenitireducens MLS10] Length = 519 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 24/201 (11%) Query: 59 FTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPL-----IVCITEGIPVLDMVR 112 +T EA ++ AN ++I V A + EAEI L ++ ++ + V D R Sbjct: 103 YTNTKEALRDHEEANLAIISVSGEFA------AREAEIALKKGLHVMIFSDNVSVEDERR 156 Query: 113 VKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 +K ++GP+C IL G+ + R+G++G+++ SGT E Q Sbjct: 157 LKELGRNKGLFVMGPDCGTAILNG----TGLCFANSVRRGNIGLVAASGTGLQEVTVQID 212 Query: 172 QEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + G G S +G GG + G + ++ D T+ IV+ I +E + Sbjct: 213 RLGGGVSQGIGTGGRDLSKDIGGLMMLQGIKALEEDPDTDVIVL---ISKPPAKEVQDLV 269 Query: 228 KDEAKRGRKKPIVGFVAGKTA 248 ++ K RK ++ F+ G A Sbjct: 270 LEQVKASRKPVVISFIDGDPA 290 >gi|29377471|ref|NP_816625.1| hypothetical protein EF3010 [Enterococcus faecalis V583] gi|29344938|gb|AAO82695.1| conserved hypothetical protein [Enterococcus faecalis V583] gi|315575021|gb|EFU87212.1| putative membrane protein FdrA [Enterococcus faecalis TX0309B] gi|315581093|gb|EFU93284.1| putative membrane protein FdrA [Enterococcus faecalis TX0309A] Length = 519 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIING----VGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ + DE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDTLMVDEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|157382720|gb|ABV48798.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA30] Length = 348 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 8/109 (7%) Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPI 239 + IGGD GT+F+D + + + + +V++GE+GG+ E + A+ +K+ G+ KP+ Sbjct: 2 IAIGGDRYPGTDFLDHMLRYEQNPQVKFMVLLGEVGGTLELKVAEAIKE----GKITKPV 57 Query: 240 VGFVAGKTAPP---GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + + G + GHAGA A+ K +++AG + S Sbjct: 58 IAWCIGTISKHFGGEVQFGHAGAKAGAETETADAKNEILRQAGAYVPKS 106 >gi|323967628|gb|EGB63041.1| acetyltransferase [Escherichia coli M863] gi|327252294|gb|EGE63966.1| acetyltransferase family protein [Escherichia coli STEC_7v] Length = 886 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI PV ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPVSQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|327311345|ref|YP_004338242.1| CoA-binding domain-containing protein [Thermoproteus uzoniensis 768-20] gi|326947824|gb|AEA12930.1| CoA-binding domain protein [Thermoproteus uzoniensis 768-20] Length = 462 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 7/124 (5%) Query: 123 RLIGPNCPGILTP-DSCKIGIMPGSIFRK---GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RL+GPNC G+ D +P + G + ++S+SG + + ++ G+G S Sbjct: 124 RLLGPNCLGVYNAFDGFDTVFLPAERAGRPPAGPLALISQSGAVAASIMDWAARRGIGLS 183 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V G G +++L F D+ + I + E G EA +FL + +KKP Sbjct: 184 IMVNYGNKADVGD--VELLRYFEKDDRIKVITIYIE-GFKYPGEAKRFLDAAREVAKKKP 240 Query: 239 IVGF 242 I+ + Sbjct: 241 IIAY 244 >gi|297520254|ref|ZP_06938640.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli OP50] Length = 430 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 105/227 (46%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ ++ +VI V A ++++ ++ +++ ++ + V D + +K Sbjct: 16 YATIASAKKHIPESSLAVISVNGLFAAREARQALQNDLNVML-FSDNVSVEDELALKQLA 74 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 75 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 131 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 132 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 187 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 188 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGV 229 >gi|113867997|ref|YP_726486.1| Acyl-CoA synthetase (NDP forming) [Ralstonia eutropha H16] gi|113526773|emb|CAJ93118.1| Acyl-CoA synthetase (NDP forming) [Ralstonia eutropha H16] Length = 898 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 8/119 (6%) Query: 123 RLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R++GPNC G++ S PG+ R+G + ++SG L + + +G S + Sbjct: 129 RILGPNCVGLIASGISLNASFAPGAA-RQGKLAFATQSGALATAVLDWSRSRQIGFSHFI 187 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G + DVL+ D T +I++ E A A+F+ R KP++ Sbjct: 188 SLGNS--ADVDAADVLDYLAGDAGTHAILLYVE----AIRHGAKFMSAARAAARNKPVL 240 >gi|332296249|ref|YP_004438172.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Thermodesulfobium narugense DSM 14796] gi|332179352|gb|AEE15041.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Thermodesulfobium narugense DSM 14796] Length = 702 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 6/128 (4%) Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 +K ++ ++ RL+GPN G++ + + +KG++G +S+SG + + Sbjct: 119 LKEIVKSNNIRLVGPNVLGLIDTHNSINASFASFMPKKGNIGFISQSGAFATAIMDWAAA 178 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 +G S + IG ID+LE+ D T+ I+M E + + F+ K Sbjct: 179 NDIGFSKFISIGNKA--DVNEIDLLEVLKDDNDTDVILMYLE----SIDNGRAFMDIAYK 232 Query: 233 RGRKKPIV 240 + KPI+ Sbjct: 233 TSKVKPII 240 >gi|307289754|ref|ZP_07569692.1| putative membrane protein FdrA [Enterococcus faecalis TX0411] gi|306499210|gb|EFM68687.1| putative membrane protein FdrA [Enterococcus faecalis TX0411] Length = 519 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIING----VGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ + DE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|237732570|ref|ZP_04563051.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226908109|gb|EEH94027.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 886 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPAAQHAELLACASRYNIRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ P + + H S G A D A+ Sbjct: 210 ---HLSDARRFVSAARSASRNKPILVIKSGRS-PAAQRLLHT----SAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|293384349|ref|ZP_06630234.1| protein FdrA [Enterococcus faecalis R712] gi|293388414|ref|ZP_06632922.1| protein FdrA [Enterococcus faecalis S613] gi|312908550|ref|ZP_07767494.1| putative membrane protein FdrA [Enterococcus faecalis DAPTO 512] gi|312908980|ref|ZP_07767842.1| putative membrane protein FdrA [Enterococcus faecalis DAPTO 516] gi|291078341|gb|EFE15705.1| protein FdrA [Enterococcus faecalis R712] gi|291082189|gb|EFE19152.1| protein FdrA [Enterococcus faecalis S613] gi|310625517|gb|EFQ08800.1| putative membrane protein FdrA [Enterococcus faecalis DAPTO 512] gi|311290680|gb|EFQ69236.1| putative membrane protein FdrA [Enterococcus faecalis DAPTO 516] Length = 519 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ + DE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|307332145|ref|ZP_07611231.1| CoA-binding domain protein [Streptomyces violaceusniger Tu 4113] gi|306882210|gb|EFN13310.1| CoA-binding domain protein [Streptomyces violaceusniger Tu 4113] Length = 711 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 29/177 (16%) Query: 118 EKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 E+ R++GPN G + D C P + KG V + S+SG + + Sbjct: 370 EEYGVRVLGPNIYGYYSTWQDLCATFCTPYDV--KGPVALTSQSGGIGMAILGFARTTKT 427 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-----E 230 G S VG+G + D+L F D+ T+ I M + LKD E Sbjct: 428 GVSAIVGLGNK--SDVDEDDLLTWFAEDDRTQCIAM-----------HLEDLKDGRAFVE 474 Query: 231 AKRGR--KKPIVGFVAGKTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGICIAP 284 A R +KP+V AG+TA + G H GA+ G D I +++AG+ AP Sbjct: 475 AARATVPRKPVVVLKAGRTAAGAKAAGSHTGAL--AGDDAVYDDI--LRQAGVIRAP 527 >gi|307274418|ref|ZP_07555602.1| putative membrane protein FdrA [Enterococcus faecalis TX2134] gi|306508928|gb|EFM78014.1| putative membrane protein FdrA [Enterococcus faecalis TX2134] gi|315036585|gb|EFT48517.1| putative membrane protein FdrA [Enterococcus faecalis TX0027] Length = 519 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ + DE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|299133571|ref|ZP_07026765.1| CoA-binding domain protein [Afipia sp. 1NLS2] gi|298591407|gb|EFI51608.1| CoA-binding domain protein [Afipia sp. 1NLS2] Length = 710 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 28/234 (11%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGP 127 + +V +P A+ E E +IP V I G + ++ + ++ RL+GP Sbjct: 319 DVAVFAIPAKFVAGALKECGEKKIPGAVLIPSGFAEANEPELQEEIVKIGKQYDIRLMGP 378 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 N G + + KGS + S+SG + + + +G S VG+G Sbjct: 379 NIYGFYYTPANLCATFCTAFDVKGSAALSSQSGGIGMAIIGFSRSAKMGVSAIVGLGNK- 437 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPIVGFVAGK 246 + D+L F D+ T I M E + + + + A+R +KKP++ G+ Sbjct: 438 -SDIDEDDLLAFFEQDKNTNVIAMHCE-----DLKDGRAFANAARRVSKKKPVIVLKGGR 491 Query: 247 TAPPGRTMG-HAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARIGRSLVELL 297 T+ + H GA+ DKI + K+AG+ A RSL +LL Sbjct: 492 TSAGAKAAASHTGAL------AGNDKIYEDVFKQAGVIRA-------RSLRQLL 532 >gi|209744880|gb|ACI70747.1| putative oxidoreductase subunit [Escherichia coli] Length = 515 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 44/196 (22%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ +++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLNVML-FSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE I ++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|328956215|ref|YP_004373548.1| protein of unknown function DUF1116 [Coriobacterium glomerans PW2] gi|328456539|gb|AEB07733.1| protein of unknown function DUF1116 [Coriobacterium glomerans PW2] Length = 998 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 6/135 (4%) Query: 52 GNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV 111 G N V + +E AN +V +P A + +++ + + T+ I + D V Sbjct: 96 GQANKTVESWEEAIEELPDANLAVFSIPGEYAAPELERALDLGLN-VFSFTDNIAIEDEV 154 Query: 112 RVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 R+K + + L+GP+C GI++ I I ++ R G++GI+ SGT E Sbjct: 155 RLKKKAHEKGLLLMGPDCGTGIIS----SIPIAFTNVIRPGNIGIIGASGTGIQEVSCII 210 Query: 171 SQEGLGQSTAVGIGG 185 + G G A+G GG Sbjct: 211 DRLGQGCVHAIGTGG 225 >gi|294780146|ref|ZP_06745518.1| bacterial FdrA protein [Enterococcus faecalis PC1.1] gi|307268423|ref|ZP_07549801.1| putative membrane protein FdrA [Enterococcus faecalis TX4248] gi|294452689|gb|EFG21119.1| bacterial FdrA protein [Enterococcus faecalis PC1.1] gi|306515230|gb|EFM83767.1| putative membrane protein FdrA [Enterococcus faecalis TX4248] Length = 519 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ + DE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|229548128|ref|ZP_04436853.1| bacterial FdrA protein [Enterococcus faecalis ATCC 29200] gi|307274280|ref|ZP_07555481.1| putative membrane protein FdrA [Enterococcus faecalis TX0855] gi|312905322|ref|ZP_07764437.1| putative membrane protein FdrA [Enterococcus faecalis TX0635] gi|229306814|gb|EEN72810.1| bacterial FdrA protein [Enterococcus faecalis ATCC 29200] gi|306509053|gb|EFM78122.1| putative membrane protein FdrA [Enterococcus faecalis TX0855] gi|310631346|gb|EFQ14629.1| putative membrane protein FdrA [Enterococcus faecalis TX0635] gi|315160023|gb|EFU04040.1| putative membrane protein FdrA [Enterococcus faecalis TX0312] gi|315162501|gb|EFU06518.1| putative membrane protein FdrA [Enterococcus faecalis TX0645] gi|315578601|gb|EFU90792.1| putative membrane protein FdrA [Enterococcus faecalis TX0630] gi|323478952|gb|ADX78391.1| bacterial FdrA family protein [Enterococcus faecalis 62] gi|327536143|gb|AEA94977.1| FdrA protein [Enterococcus faecalis OG1RF] Length = 519 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ + DE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|332701485|ref|ZP_08421573.1| CoA-binding domain protein [Desulfovibrio africanus str. Walvis Bay] gi|332551634|gb|EGJ48678.1| CoA-binding domain protein [Desulfovibrio africanus str. Walvis Bay] Length = 893 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 17/190 (8%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS--------R 123 + +VI PPS D I + + + I G L+ + RLE + R Sbjct: 71 DMAVICTPPSHTPDYIRKLGKRGTRAAIIIGPGFATLESEE-RGRLEYETHEAAKHYGMR 129 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ-EGLGQSTAVG 182 L+GPNC G+++P + + + +G + +++S +L + V +Q G+G S + Sbjct: 130 LLGPNCMGLISPSAGLNASLAHTDAAQGRIAFVTQSDSL-FTTVLDWAQGSGIGFSHFIS 188 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G F VL+ +D T SI++ E + +A F+ R KPI+ Sbjct: 189 LGDQ--LDVNFAAVLDYLGSDTMTRSILLYVE----SICDARSFMSAARASARNKPILVI 242 Query: 243 VAGKTAPPGR 252 G P R Sbjct: 243 KPGGNVPEYR 252 >gi|32170714|dbj|BAC78379.1| putative salicyl-CoA synthetase [Streptomyces sp. WA46] Length = 685 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 12/147 (8%) Query: 123 RLIGPNCPGILTPDS-CKIGIMPGS-IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R++GPN G L P +PG+ +G V +++ SG + + F ++ G+G Sbjct: 127 RVLGPNTSGFLAPHRRLTASFVPGAPDLERGPVAVVAASGGVNHALAFALAEAGVGLRLG 186 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIG--GSAEEEAAQFLKDEAKRGRKKP 238 VG+G + T+ DVL+ D+ ++ + E G EA + L D + P Sbjct: 187 VGLGNS-LDVTQ-ADVLDHLAEDDGVRAVALHVETAAEGRRLTEAVRRLTD------RVP 238 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGK 265 +V V G++ H GA+ + + Sbjct: 239 VVALVVGRSDIGDFARSHTGALATSWR 265 >gi|150400473|ref|YP_001324239.1| acetyl coenzyme A synthetase subunit alpha [Methanococcus aeolicus Nankai-3] gi|150013176|gb|ABR55627.1| Acetyl coenzyme A synthetase (ADP forming) alpha domain [Methanococcus aeolicus Nankai-3] Length = 714 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 7/123 (5%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +K + R+IGPNC GI+ + F++G+V +S+SG + + + +G Sbjct: 133 KKYNIRIIGPNCLGIINMHNKLNASFSKEYFKEGTVAFISQSGAILTAILDISPLINVGF 192 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V G + D++E D+ T IVM I G ++ +F++ K + K Sbjct: 193 SKIVSTGNK--MDIQESDLMEYLANDDNTSVIVMY--IEGLKDK---KFIESAKKLSKTK 245 Query: 238 PIV 240 PI+ Sbjct: 246 PII 248 >gi|307287294|ref|ZP_07567358.1| putative membrane protein FdrA [Enterococcus faecalis TX0109] gi|306501627|gb|EFM70921.1| putative membrane protein FdrA [Enterococcus faecalis TX0109] gi|315166013|gb|EFU10030.1| putative membrane protein FdrA [Enterococcus faecalis TX1302] Length = 519 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ + DE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|257091263|ref|ZP_05585624.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257000075|gb|EEU86595.1| conserved hypothetical protein [Enterococcus faecalis CH188] Length = 524 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 145 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 200 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ + DE T++I+++ Sbjct: 201 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLI 260 Query: 213 GE 214 + Sbjct: 261 SK 262 >gi|85858637|ref|YP_460839.1| acyl-CoA synthetase [Syntrophus aciditrophicus SB] gi|85721728|gb|ABC76671.1| acyl-CoA synthetase [Syntrophus aciditrophicus SB] Length = 727 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 19/177 (10%) Query: 112 RVKARLEKSSSRLIGPNCPGILTP---DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 R++ + RL+GPNC G++ + IG++ KG++G+ +++G Y A Sbjct: 388 RIREIIRAHGCRLLGPNCSGVINTHVGNVQSIGLVDE--LGKGNIGMTAQAG--VYAAGI 443 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 T + V G+ + +E D+LE +D+ + + M E S +F+ Sbjct: 444 LTGLRHVMDFGIVATIGNKMDISE-TDILEYLGSDDHIDVVAMYMEDVKSGR----RFID 498 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN--AMKEAGICIA 283 ++ +KKP++ G+TA + + A ++G D+IN A +++GI A Sbjct: 499 VASEVTKKKPVIALKGGRTAAGTKVVSSHTASLAGN-----DEINSAAFRQSGIIRA 550 >gi|257078395|ref|ZP_05572756.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|256986425|gb|EEU73727.1| conserved hypothetical protein [Enterococcus faecalis JH1] Length = 524 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 145 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 200 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ + DE T++I+++ Sbjct: 201 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLI 260 Query: 213 GE 214 + Sbjct: 261 SK 262 >gi|119715721|ref|YP_922686.1| FdrA family protein [Nocardioides sp. JS614] gi|119536382|gb|ABL80999.1| FdrA family protein [Nocardioides sp. JS614] Length = 471 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 8/156 (5%) Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T A A RT +++ VP + A ++++EA ++V ++ +P+ + +K + Sbjct: 108 TTASALRRTPDAVALVSVPGAHAFVEAMDAVEAGRDVMV-FSDNVPLEQELALKRAAAER 166 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++GP+C G D +G ++ G VGI++ SGT + + G+G ++A Sbjct: 167 GVLVMGPDC-GTAVVDGVGLGF--ANVVEPGPVGIVAASGTGCQQLLALLDHAGVGVTSA 223 Query: 181 VGIGGDP----VKGTEFIDVLELFLADEATESIVMV 212 +G+GG V+G + L D E IV++ Sbjct: 224 LGVGGRDLSAEVRGLATREALRRLDEDPGVELIVLI 259 >gi|255970784|ref|ZP_05421370.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|256962860|ref|ZP_05567031.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|255961802|gb|EET94278.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|256953356|gb|EEU69988.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] Length = 524 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 145 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 200 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ + DE T++I+++ Sbjct: 201 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLI 260 Query: 213 GE 214 + Sbjct: 261 SK 262 >gi|229547559|ref|ZP_04436284.1| FdrA family protein [Enterococcus faecalis TX1322] gi|229307332|gb|EEN73319.1| FdrA family protein [Enterococcus faecalis TX1322] gi|315030625|gb|EFT42557.1| putative membrane protein FdrA [Enterococcus faecalis TX4000] Length = 519 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ +AD+ T++I+++ Sbjct: 196 GASGTGSQEVNVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMADKQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|298675798|ref|YP_003727548.1| acetyl coenzyme A synthetase [Methanohalobium evestigatum Z-7303] gi|298288786|gb|ADI74752.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanohalobium evestigatum Z-7303] Length = 697 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 21/181 (11%) Query: 115 ARLEKSSS--------RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 A+LE+ S R++GPNC G++ S + KG++G++S+SG + Sbjct: 107 AKLERESVETARKYGIRMLGPNCLGLIDTTSNLNASFASFMAHKGNIGLMSQSGAICTST 166 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + +G S + +G D L+ D++T I E + +F Sbjct: 167 LDWADKNRVGFSKFISLGNKADLSEN--DFLQELCNDDSTAVIAAYLE----GVKNGPEF 220 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKIN-AMKEAGICIAP 284 + + KP+V +G+T+ R + H G + G+++ N A +++GI A Sbjct: 221 IDIARRVTSIKPVVMVKSGRTSAGSRAVSSHTGTL-----AGSDEAYNAAFRQSGIIRAD 275 Query: 285 S 285 S Sbjct: 276 S 276 >gi|257080574|ref|ZP_05574935.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|256988604|gb|EEU75906.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] Length = 524 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 145 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 200 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ + DE T++I+++ Sbjct: 201 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLI 260 Query: 213 GE 214 + Sbjct: 261 SK 262 >gi|256960376|ref|ZP_05564547.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|256950872|gb|EEU67504.1| conserved hypothetical protein [Enterococcus faecalis Merz96] Length = 524 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 145 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 200 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ + DE T++I+++ Sbjct: 201 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLI 260 Query: 213 GE 214 + Sbjct: 261 SK 262 >gi|256958296|ref|ZP_05562467.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256948792|gb|EEU65424.1| conserved hypothetical protein [Enterococcus faecalis DS5] Length = 524 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 145 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 200 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ + DE T++I+++ Sbjct: 201 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLI 260 Query: 213 GE 214 + Sbjct: 261 SK 262 >gi|293413570|ref|ZP_06656219.1| yahF protein [Escherichia coli B185] gi|291433628|gb|EFF06601.1| yahF protein [Escherichia coli B185] Length = 515 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 44/196 (22%), Positives = 92/196 (46%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE I ++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|163849442|ref|YP_001637486.1| acetyl coenzyme A synthetase subunit alpha [Chloroflexus aurantiacus J-10-fl] gi|222527446|ref|YP_002571917.1| acetyl coenzyme A synthetase alpha domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163670731|gb|ABY37097.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Chloroflexus aurantiacus J-10-fl] gi|222451325|gb|ACM55591.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Chloroflexus sp. Y-400-fl] Length = 696 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 15/218 (6%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL-----DMVR-VKARLEKSSSRLI 125 + +V+ +PP A+ E I +V IT G + ++ R + A + + R+I Sbjct: 67 DLAVVVIPPQHVIAAVDECGRKGIKGLVVITAGFKEVGGAGRELERELLATVRRYGMRMI 126 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 GPN GI+ S ++ G++ ++S+SG + + + Q+G+G S V +G Sbjct: 127 GPNSLGIIDTISKLNASFANAMPLPGNIALMSQSGAICTAILDWSHQQGIGFSRFVSLGN 186 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 + + +LE + DE + I+ E A ++ F++ + + P+V +G Sbjct: 187 K--TDVDEVALLEAWNRDEHSRVILAYLE----AIDDGPGFIRVAREVTKTTPVVAIKSG 240 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 TA R ++G + E A ++GI A Sbjct: 241 TTAAGTRAASSHTGSLAGSEAAYE---TAFAQSGILRA 275 >gi|320662485|gb|EFX29874.1| Bacterial FdrA protein [Escherichia coli O55:H7 str. USDA 5905] Length = 515 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 44/196 (22%), Positives = 92/196 (46%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE I ++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|224369288|ref|YP_002603452.1| hypothetical protein HRM2_21900 [Desulfobacterium autotrophicum HRM2] gi|223692005|gb|ACN15288.1| conserved hypothetical protein [Desulfobacterium autotrophicum HRM2] Length = 487 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 11/146 (7%) Query: 118 EKSSSRLIGPNCPGIL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 EK R +GPNC G++ T + +P R G +G+ S+SG+ + S+ G+G Sbjct: 128 EKYGIRFLGPNCIGVINTHLNLNATFLPYEAGR-GYIGMASQSGSFITQMSPHMSRLGMG 186 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST IG + + +D + A T I + E + F+ K Sbjct: 187 FSTGFSIGNE--ANVDIVDCMAYLGACPNTRVIALYIE----SIRRGRAFIDTARAIVPK 240 Query: 237 KPIVGFVAGKTAPPGRTMG--HAGAV 260 KPIV F G + GR G H GA+ Sbjct: 241 KPIVAFYVGGSD-EGRRAGFSHTGAL 265 >gi|221213072|ref|ZP_03586048.1| CoA binding domain protein [Burkholderia multivorans CGD1] gi|221167285|gb|EED99755.1| CoA binding domain protein [Burkholderia multivorans CGD1] Length = 721 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 18/148 (12%) Query: 123 RLIGPNCPGILTPDS-CKIGIMP--GSIF--RKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 R+ GPNC G+ + + MP G + R G V ++S+SG L Y V Q G+G Sbjct: 134 RIAGPNCVGLANVRTGAAMNFMPDCGKMINGRSGRVAVVSQSGALGY-TVLQAMTRGVGI 192 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR---G 234 S + G + D + D SI+ + E + A+FL EA R Sbjct: 193 SHYLAAGNS--SDVDVADFIATLADDPEVGSIICLFE----GVKSGARFL--EAARLADA 244 Query: 235 RKKPIVGFVAGKTAPPGR-TMGHAGAVI 261 KP+V + AG TA G+ + H G ++ Sbjct: 245 AGKPLVVYKAGNTAASGKAALSHTGTLV 272 >gi|297517289|ref|ZP_06935675.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli OP50] Length = 244 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 12/151 (7%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRS 159 CI P ++A + + RL+GPN G+L P + ++G + +S+S Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVLIKRGKLAFISQS 156 Query: 160 GTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEIG 216 ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 157 AAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE-- 209 Query: 217 GSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 +A +F+ R KPI+ +G++ Sbjct: 210 --QLSDARRFVSAARSASRNKPILVIKSGRS 238 >gi|291281222|ref|YP_003498040.1| Bacterial FdrA protein [Escherichia coli O55:H7 str. CB9615] gi|209744874|gb|ACI70744.1| putative oxidoreductase subunit [Escherichia coli] gi|290761095|gb|ADD55056.1| Bacterial FdrA protein [Escherichia coli O55:H7 str. CB9615] gi|320644062|gb|EFX13142.1| Bacterial FdrA protein [Escherichia coli O157:H- str. 493-89] gi|320649345|gb|EFX17896.1| Bacterial FdrA protein [Escherichia coli O157:H- str. H 2687] gi|320656907|gb|EFX24767.1| Bacterial FdrA protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320665301|gb|EFX32391.1| Bacterial FdrA protein [Escherichia coli O157:H7 str. LSU-61] Length = 515 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 44/196 (22%), Positives = 92/196 (46%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE I ++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|15800044|ref|NP_286056.1| putative oxidoreductase subunit [Escherichia coli O157:H7 EDL933] gi|15829623|ref|NP_308396.1| oxidoreductase subunit [Escherichia coli O157:H7 str. Sakai] gi|168749187|ref|ZP_02774209.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4113] gi|168755890|ref|ZP_02780897.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4401] gi|168761981|ref|ZP_02786988.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4501] gi|168769691|ref|ZP_02794698.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4486] gi|168775363|ref|ZP_02800370.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4196] gi|168782688|ref|ZP_02807695.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4076] gi|168788608|ref|ZP_02813615.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC869] gi|168799743|ref|ZP_02824750.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC508] gi|195937815|ref|ZP_03083197.1| putative oxidoreductase subunit [Escherichia coli O157:H7 str. EC4024] gi|208809406|ref|ZP_03251743.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4206] gi|208815953|ref|ZP_03257132.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4045] gi|208823146|ref|ZP_03263464.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4042] gi|209400839|ref|YP_002268951.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4115] gi|217324539|ref|ZP_03440623.1| bacterial FdrA protein [Escherichia coli O157:H7 str. TW14588] gi|254791494|ref|YP_003076331.1| putative acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli O157:H7 str. TW14359] gi|261223795|ref|ZP_05938076.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli O157:H7 str. FRIK2000] gi|261256003|ref|ZP_05948536.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli O157:H7 str. FRIK966] gi|12513137|gb|AAG54664.1|AE005210_8 putative oxidoreductase subunit [Escherichia coli O157:H7 str. EDL933] gi|13359826|dbj|BAB33792.1| putative oxidoreductase subunit [Escherichia coli O157:H7 str. Sakai] gi|187769113|gb|EDU32957.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4196] gi|188016454|gb|EDU54576.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4113] gi|188999874|gb|EDU68860.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4076] gi|189356915|gb|EDU75334.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4401] gi|189361304|gb|EDU79723.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4486] gi|189367649|gb|EDU86065.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4501] gi|189371673|gb|EDU90089.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC869] gi|189377895|gb|EDU96311.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC508] gi|208729207|gb|EDZ78808.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4206] gi|208732601|gb|EDZ81289.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4045] gi|208737339|gb|EDZ85023.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4042] gi|209162239|gb|ACI39672.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4115] gi|209744876|gb|ACI70745.1| putative oxidoreductase subunit [Escherichia coli] gi|209744878|gb|ACI70746.1| putative oxidoreductase subunit [Escherichia coli] gi|209744882|gb|ACI70748.1| putative oxidoreductase subunit [Escherichia coli] gi|217320760|gb|EEC29184.1| bacterial FdrA protein [Escherichia coli O157:H7 str. TW14588] gi|254590894|gb|ACT70255.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli O157:H7 str. TW14359] gi|320192341|gb|EFW66985.1| Putative oxidoreductase subunit [Escherichia coli O157:H7 str. EC1212] gi|326343396|gb|EGD67160.1| Putative oxidoreductase subunit [Escherichia coli O157:H7 str. 1044] gi|326347215|gb|EGD70941.1| Putative oxidoreductase subunit [Escherichia coli O157:H7 str. 1125] Length = 515 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 44/196 (22%), Positives = 92/196 (46%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE I ++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|194438180|ref|ZP_03070272.1| bacterial FdrA protein [Escherichia coli 101-1] gi|253774691|ref|YP_003037522.1| FdrA family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160395|ref|YP_003043503.1| putative acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli B str. REL606] gi|300927644|ref|ZP_07143214.1| bacterial FdrA protein [Escherichia coli MS 187-1] gi|194422844|gb|EDX38839.1| bacterial FdrA protein [Escherichia coli 101-1] gi|253325735|gb|ACT30337.1| FdrA family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972296|gb|ACT37967.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli B str. REL606] gi|253976505|gb|ACT42175.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli BL21(DE3)] gi|300464316|gb|EFK27809.1| bacterial FdrA protein [Escherichia coli MS 187-1] gi|313848542|emb|CAQ30796.2| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli BL21(DE3)] gi|323963491|gb|EGB59052.1| FdrA protein [Escherichia coli H489] gi|323972496|gb|EGB67703.1| FdrA protein [Escherichia coli TA007] Length = 515 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 104/227 (45%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ ++ +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESSLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A + L E R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA--VARKVL--ERAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGV 314 >gi|256854690|ref|ZP_05560054.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256710250|gb|EEU25294.1| conserved hypothetical protein [Enterococcus faecalis T8] Length = 524 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++GP+C I+ +G+ + R G +GI+ Sbjct: 145 VMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIIN----GVGLCFANEVRSGDIGIV 200 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ +AD+ T++I+++ Sbjct: 201 GASGTGSQEVNVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMADKQTKAILLI 260 Query: 213 GE 214 + Sbjct: 261 SK 262 >gi|166032664|ref|ZP_02235493.1| hypothetical protein DORFOR_02379 [Dorea formicigenerans ATCC 27755] gi|166027021|gb|EDR45778.1| hypothetical protein DORFOR_02379 [Dorea formicigenerans ATCC 27755] Length = 1003 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 28/186 (15%) Query: 43 KKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCIT 102 KK ST G + V + A K+ + AN +VI +P + A ++EA+ L Sbjct: 88 KKQSTAAEGKKGSESVKSWDAALKKMSNANLAVISIPGAYA------ALEADRAL----D 137 Query: 103 EGIPVL---DMVRV---KARLEKSSSR---LIGPNC-PGILTPDSCKIGIMPGSIFRKGS 152 EG+ V D V + KA EK+ S+ ++GP+C GI+ + I + KGS Sbjct: 138 EGLSVFMFSDNVTIEDEKALKEKAHSKGLAVMGPDCGTGIIQ----GVPIAFTNNVAKGS 193 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATES 208 +GI+ SGT E + G G + A+GIGG +K G +D+++ D+ + Sbjct: 194 IGIIGASGTGIQELTTIIDRLGEGVTNAIGIGGRDLKAEVGGITMMDMIDAMEDDDTVKV 253 Query: 209 IVMVGE 214 +V+V + Sbjct: 254 LVIVSK 259 >gi|296104257|ref|YP_003614403.1| GCN5-related N-acetyltransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058716|gb|ADF63454.1| GCN5-related N-acetyltransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 887 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 15/145 (10%) Query: 119 KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + R++GPN G+L P P I RKG + +S+S ++ + Q +G Sbjct: 116 RYQMRILGPNSLGLLAPWQGLNASFSPVPI-RKGKLAFISQSAAVSNTILDWAQQREMGF 174 Query: 178 STAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 S + +G + IDV EL FLA D T +I++ E +A +F+ Sbjct: 175 SYFIALG-----DSLDIDVDELLDFLARDSKTSAILLYLE----HLSDARRFVSASRSAS 225 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGA 259 R KPI+ +G++ P +++ H+ + Sbjct: 226 RNKPILVIKSGRS-PAAQSLLHSHS 249 >gi|157382782|gb|ABV48828.1| ATP citrate lyase alpha subunit [Sulfurovum lithotrophicum] Length = 308 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 8/96 (8%) Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAG---KTAPPGRTMGHAGAVISGG 264 ++++GE+GG+ E + + +KD GR KKPI+ + G K G GHAGA + Sbjct: 6 MILLGEVGGTEEYKVIEAVKD----GRIKKPIIAWCIGTIAKHFSSGVQFGHAGASANAD 61 Query: 265 KGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 A K AM EAGI + S + ++ E+ L Sbjct: 62 AETAAAKNKAMAEAGIYVPESFNDLPATIAEVYNDL 97 >gi|197302430|ref|ZP_03167485.1| hypothetical protein RUMLAC_01158 [Ruminococcus lactaris ATCC 29176] gi|197298328|gb|EDY32873.1| hypothetical protein RUMLAC_01158 [Ruminococcus lactaris ATCC 29176] Length = 252 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 16/137 (11%) Query: 10 KVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT 69 K+L+ G GK G TE A ++V G+ +T PVF T++E Sbjct: 3 KILMHGCNGKMGRMITEIAKQDQDVEIVAGVDK------YTAVANEYPVFETISECDVDA 56 Query: 70 AANASVIYVPPSGAGDAIIE-SIEAEIPLIVCITEGIPVLDMVRVKARLE-----KSSSR 123 A VI +GA D +++ +E ++P ++C T G+ + RVK E KS++ Sbjct: 57 DA---VIDFSNAGAVDELLDYCVEKKLPAVLCTT-GLSEEQLARVKEVSEKIAVLKSANM 112 Query: 124 LIGPNCPGILTPDSCKI 140 +G N L D+ K+ Sbjct: 113 SMGINLLLKLLKDAAKV 129 >gi|170692634|ref|ZP_02883796.1| CoA-binding domain protein [Burkholderia graminis C4D1M] gi|170142290|gb|EDT10456.1| CoA-binding domain protein [Burkholderia graminis C4D1M] Length = 731 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 93/232 (40%), Gaps = 24/232 (10%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP----VLDMVRVKARLEKSSSRLIGP 127 + +V +P A+ E + IP V I G V + A + RL+GP Sbjct: 341 DVAVFAIPAKFVAGALTEVGKKHIPGAVLIPSGFAETGNVEGQQEIVAIAREYDIRLMGP 400 Query: 128 NCPGIL-TPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 N G TP + C P + +G + S+SG + + + +G S VG+G Sbjct: 401 NIYGFYYTPKNLCATFCTPYDV--QGKAALSSQSGGIGMAIIGFSRSAKMGVSAIVGLGN 458 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 + D+L F DE T+ I E ++ F + A+ +KKP+V AG Sbjct: 459 K--SDIDEDDLLTFFEQDENTDIIAQHCE----DLKDGRAFAETAARVSKKKPVVVLKAG 512 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +T+ R ++G ED K+ G+ A RSL +LL Sbjct: 513 RTSLGARAASSHTGALAGNDRIYED---VFKQCGVIRA-------RSLRDLL 554 >gi|240102798|ref|YP_002959107.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA) [Thermococcus gammatolerans EJ3] gi|239910352|gb|ACS33243.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA) [Thermococcus gammatolerans EJ3] Length = 474 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 18/200 (9%) Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 V+ +V E + T + +VI +P D + + E I ++ IT G L K Sbjct: 66 VYHSVEELPDDT--DLAVISIPAPFVPDTMRQIAEKGIKAVIIITGGFGELGEEGKKLER 123 Query: 118 E------KSSSRLIGPNCPGILTPDS-CKIGIMPGSIFRK---GSVGILSRSGTLTYEAV 167 E + R+IGPNC G+ PD+ +P S + G + +S+SG + Sbjct: 124 EIYEIAKANGIRVIGPNCVGVYVPDTGVDTVFLPESKMDRPQSGPIAFVSQSGAFAAAML 183 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + G+G V G + D+++ F+ D+ + E ++ +F+ Sbjct: 184 DWAAMAGIGIGKMVSYGNK--IDVDDADLMDYFIHDDGINVVTFYIE----GVKDGRKFM 237 Query: 228 KDEAKRGRKKPIVGFVAGKT 247 + + R KP++ +G+T Sbjct: 238 ESAKRITRVKPVIALKSGRT 257 >gi|91203594|emb|CAJ71247.1| similar to acetyl-CoA synthetase (ADP-forming) alpha subunit [Candidatus Kuenenia stuttgartiensis] Length = 462 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 20/148 (13%) Query: 103 EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF--------RKGSVG 154 EGI + + +R K LE ++ R+IGPNC G+L S ++G++ Sbjct: 111 EGIQMEEDIR-KVALE-NNIRIIGPNCLGVLD----NYANFTTSFLSWERITKPKRGALS 164 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ILS+SG + +QEG+G + V G G D+L D T+ + + E Sbjct: 165 ILSQSGAFAITVLDLAAQEGIGIAKMVNYGNRMDVGES--DLLPFLKEDHHTKVVAIYME 222 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + + +F++ R+KPIV Sbjct: 223 ----SVDHGRRFIEAAKACSREKPIVAL 246 >gi|257874961|ref|ZP_05654614.1| membrane protein FdrA [Enterococcus casseliflavus EC20] gi|257809127|gb|EEV37947.1| membrane protein FdrA [Enterococcus casseliflavus EC20] Length = 584 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 10/149 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC- 129 A +V+ +P + A I E+ A + C ++ + + + VR+K + L+GP+C Sbjct: 114 AKVAVLSIPGTMAAPEI-ETALAAGKHVFCFSDNVSLEEEVRLKKMAHEQGLLLMGPDCG 172 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 GIL I + + RKG +G++ SGT E + G G + A+G GG +K Sbjct: 173 TGILN----GIPVAFTNAVRKGKIGVVGASGTGIQEVTTIIHKLGAGVTQAIGTGGRDLK 228 Query: 190 ----GTEFIDVLELFLADEATESIVMVGE 214 G D + D TE IV++ + Sbjct: 229 EAVGGITMKDSILALEHDPDTEVIVVISK 257 >gi|197284298|ref|YP_002150170.1| acyl-CoA synthetase/acetyltransferase [Proteus mirabilis HI4320] gi|194681785|emb|CAR41007.1| putative acyl-CoA synthetase/acetyltransferase [Proteus mirabilis HI4320] Length = 886 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 8/136 (5%) Query: 113 VKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 +K ++ RL+GPN G+L P P + +KG + +S+S + + Sbjct: 110 IKTLCQQYHIRLLGPNSLGLLAPWQGLNASFSPLPV-KKGKLAFISQSAAVANTILDWAY 168 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +G S + +G + + + D+L+ D T +I++ E +A +F+ Sbjct: 169 YRNIGFSYFIALGDN--QDIQVDDLLDFLARDSKTSAILLHLE----HIHDARRFMSASR 222 Query: 232 KRGRKKPIVGFVAGKT 247 R KPI+ +G+T Sbjct: 223 SASRNKPILVIKSGRT 238 >gi|328958061|ref|YP_004375447.1| succinate--CoA ligase (ADP-forming) subunit alpha [Carnobacterium sp. 17-4] gi|328674385|gb|AEB30431.1| succinate--CoA ligase (ADP-forming) subunit alpha [Carnobacterium sp. 17-4] Length = 587 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 + C ++ + + D R+K + + L+GP+C GI+ I + ++ RKG++GI+ Sbjct: 142 VFCFSDNVSIEDEKRLKLKAHEKGLLLMGPDCGTGIIN----GIPLAFTNVVRKGAIGIV 197 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT E + G G + A+G GG +K G +D + D T+ IV++ Sbjct: 198 GASGTGIQEVSTIIHKLGGGVTNAIGTGGRDLKEEIGGITLMDGIVTLENDPDTDVIVVI 257 Query: 213 GE 214 + Sbjct: 258 SK 259 >gi|242280507|ref|YP_002992636.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242123401|gb|ACS81097.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 708 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 55/220 (25%), Positives = 90/220 (40%), Gaps = 20/220 (9%) Query: 51 GGNVN-VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 GG++N + + +++ T + +V+ VP E +E + +V IT G +D Sbjct: 46 GGDINGISAYKKISDIG--TPVDLAVVAVPRDLVLGIFKELLELGVSSVVVITAGFKEVD 103 Query: 110 M------VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLT 163 V++ E+ L+GPNC G++ GS+G S+SG L Sbjct: 104 HEGWLLEVQLAKLAEEHGVNLLGPNCLGVINSRGGVNASFATGNPLPGSMGFFSQSGALC 163 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE--E 221 + E +G S + +G V ++E D T+ I+ G E E Sbjct: 164 VAVLDWALGEKVGFSKFISLGNKAVINEA--SMIEYLGNDPETKVIL------GYVENIE 215 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAV 260 + +F+ AK KKPI+ AG T R H GA+ Sbjct: 216 DGREFMAQAAKVSMKKPILMMKAGTTPAGARAASSHTGAM 255 >gi|148254555|ref|YP_001239140.1| hypothetical protein BBta_3116 [Bradyrhizobium sp. BTAi1] gi|146406728|gb|ABQ35234.1| hypothetical protein BBta_3116 [Bradyrhizobium sp. BTAi1] Length = 713 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 97/235 (41%), Gaps = 30/235 (12%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGP 127 + +V +P A+ E E +IP V I G ++A + +K + RL+GP Sbjct: 323 DTAVFAIPAKFVAAALAECGEKKIPGAVLIPSGFAEAGAPELQAEIVEVGKKYNIRLMGP 382 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 N G + + KG + S+SG + + + +G S VG+G Sbjct: 383 NIYGFYYTPANLCATFCTAYDVKGHAALSSQSGGIGMAIIGFSRSAKMGVSAIVGLGNK- 441 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEI--GGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 + D+L F D T I E G A EAA+ + +KKP++ AG Sbjct: 442 -SDIDEDDLLAFFEQDPNTNLIAQHCEDLKDGRAFAEAAK------RVSKKKPVIVLKAG 494 Query: 246 KTAPPGRTM-GHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARIGRSLVELL 297 +T+ + H GA+ DKI + +K++G+ A RSL +LL Sbjct: 495 RTSAGAKAASSHTGAL------AGNDKIYEDVLKQSGVIRA-------RSLRQLL 536 >gi|987653|dbj|BAA10925.1| hypothetical 67KD protein [Escherichia coli K-12] Length = 612 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQRKMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|307594764|ref|YP_003901081.1| CoA-binding domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307549965|gb|ADN50030.1| CoA-binding domain protein [Vulcanisaeta distributa DSM 14429] Length = 464 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 14/161 (8%) Query: 115 ARLEKSSS-------RLIGPNCPGILTP-DSCKIGIMPGSIF---RKGSVGILSRSGTLT 163 ARLE+ R++GPNC G+ + +P R G + ++S+SG + Sbjct: 110 ARLEREVREASQGRVRILGPNCIGVYNAFNGLDTFFIPQGRMERPRAGPIALISQSGAVA 169 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 + +++G+G AV G+ + +E +++LE +E +VM E G E Sbjct: 170 AAILDWAARKGIGVGIAVNY-GNKLDISE-VELLEALAGNEDLRVVVMYVE-GLKYPGEG 226 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 + L+ + + KP++ + AG++ GR + A ++G Sbjct: 227 RRLLEVMRRVTKVKPVIVYKAGRSKSSGRAVKSHTAALAGN 267 >gi|227358562|ref|ZP_03842887.1| acyl-CoA synthetase/acetyltransferase [Proteus mirabilis ATCC 29906] gi|227161273|gb|EEI46347.1| acyl-CoA synthetase/acetyltransferase [Proteus mirabilis ATCC 29906] Length = 886 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 8/136 (5%) Query: 113 VKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 +K ++ RL+GPN G+L P P + +KG + +S+S + + Sbjct: 110 IKTLCQQYHIRLLGPNSLGLLAPWQGLNASFSPLPV-KKGKLAFISQSAAVANTILDWAY 168 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +G S + +G + + + D+L+ D T +I++ E +A +F+ Sbjct: 169 YRNIGFSYFIALGDN--QDIQVDDLLDFLARDSKTSAILLHLE----HIHDARRFMSASR 222 Query: 232 KRGRKKPIVGFVAGKT 247 R KPI+ +G+T Sbjct: 223 SASRNKPILVIKSGRT 238 >gi|157144483|ref|YP_001451802.1| hypothetical protein CKO_00200 [Citrobacter koseri ATCC BAA-895] gi|157081688|gb|ABV11366.1| hypothetical protein CKO_00200 [Citrobacter koseri ATCC BAA-895] Length = 886 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A ++ RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPAAQHAELLACAQRYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---HLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|257871698|ref|ZP_05651351.1| membrane protein FdrA [Enterococcus casseliflavus EC10] gi|257805862|gb|EEV34684.1| membrane protein FdrA [Enterococcus casseliflavus EC10] Length = 588 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 10/149 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC- 129 A +V+ +P + A I E+ A + C ++ + + + VR+K + L+GP+C Sbjct: 118 AKVAVLSIPGTMAAPEI-ETALAAGKHVFCFSDNVSLEEEVRLKKMAHEQGLLLMGPDCG 176 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 GIL I + + RKG +G++ SGT E + G G + A+G GG +K Sbjct: 177 TGILN----GIPVAFTNAVRKGKIGVVGASGTGIQEVTTIIHKLGAGVTQAIGTGGRDLK 232 Query: 190 ----GTEFIDVLELFLADEATESIVMVGE 214 G D + D TE IV++ + Sbjct: 233 EAVGGITMKDSILALENDPDTEVIVVISK 261 >gi|300786454|ref|YP_003766745.1| acyl-CoA synthetase [Amycolatopsis mediterranei U32] gi|299795968|gb|ADJ46343.1| acyl-CoA synthetase [Amycolatopsis mediterranei U32] Length = 708 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 69/245 (28%), Positives = 106/245 (43%), Gaps = 46/245 (18%) Query: 52 GNVNVPVFTTVA--------EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE 103 G+V+V VF A EA E+ A A +I PSG G+ T Sbjct: 315 GDVDVAVFAIPAKFVPAALEEAGEKGVAGAILI---PSGFGE----------------TG 355 Query: 104 GIPVLDMVRVKARLEKSSSRLIGPNCPGIL-TPDSCKIGI-MPGSIFRKGSVGILSRSGT 161 I + D V AR K R++GPN G TP++ P + KG V + S+SG Sbjct: 356 NIALQDEVVAIAR--KHGVRILGPNIYGYYYTPENLSATFCTPYDV--KGGVALSSQSGG 411 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 + + + +G S+ VG+G + D+L D+ TE I M E + Sbjct: 412 IGMAILGFSRSAKMGVSSIVGVGNK--ADLDEDDLLTFCEQDDNTELIAMHLE-----DL 464 Query: 222 EAAQFLKDEAKR-GRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAG 279 + + + AKR ++KP+V AG+T+ R H GA+ G D I ++++G Sbjct: 465 KDGRAFAETAKRVSQRKPVVVLKAGRTSQGARAASSHTGAL--AGNDKVYDDI--LRQSG 520 Query: 280 ICIAP 284 + AP Sbjct: 521 VIRAP 525 >gi|257865368|ref|ZP_05645021.1| membrane protein FdrA [Enterococcus casseliflavus EC30] gi|257799302|gb|EEV28354.1| membrane protein FdrA [Enterococcus casseliflavus EC30] Length = 584 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 10/149 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC- 129 A +V+ +P + A I E+ A + C ++ + + + VR+K + L+GP+C Sbjct: 114 AKVAVLSIPGTMAAPEI-ETALAAGKHVFCFSDNVSLEEEVRLKKMAHEQGLLLMGPDCG 172 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 GIL I + + RKG +G++ SGT E + G G + A+G GG +K Sbjct: 173 TGILN----GIPVAFTNAVRKGKIGVVGASGTGIQEVTTIIHKLGAGVTQAIGTGGRDLK 228 Query: 190 ----GTEFIDVLELFLADEATESIVMVGE 214 G D + D TE IV++ + Sbjct: 229 EAVGGITMKDSILALENDPDTEVIVVISK 257 >gi|13475504|ref|NP_107068.1| hypothetical protein mlr6591 [Mesorhizobium loti MAFF303099] gi|14026256|dbj|BAB52854.1| mlr6591 [Mesorhizobium loti MAFF303099] Length = 893 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 11/159 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R+IGPN G++ P + G++ +LS+SG + + +G S V Sbjct: 124 RIIGPNTVGLMIPPVKLNAGFAHMAAKPGNIALLSQSGAIATSLIDWAGDNNVGFSQIVS 183 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + D L++ D T +IVM E + +F+ R KP++ Sbjct: 184 LGD--MADVDVGDCLDMLAGDMHTHAIVMYLETIPNPR----KFMSAARAAARLKPVIVI 237 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGI 280 +G+ A A +G GA+ ++ A++ AGI Sbjct: 238 KSGRH----EQAAKAAATHTGALSGADRVVDAALRRAGI 272 >gi|115958860|ref|XP_001181056.1| PREDICTED: similar to ATP-citrate lyase, partial [Strongylocentrotus purpuratus] Length = 121 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 21/114 (18%) Query: 95 IPLIVCITEGIP------VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG------- 141 I I I EGIP ++DM K S +IGP G + P KIG Sbjct: 1 IKTIAIIAEGIPENKTRILIDMA------NKKSVTIIGPATVGGIKPGCFKIGNTGGMLD 54 Query: 142 -IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 I+ ++R GSV +SRSG ++ E S+ G V IGGD + G F+ Sbjct: 55 NILSSKLYRPGSVSYVSRSGGMSNELNNIISRNADGVYEGVAIGGDRL-GNNFM 107 >gi|331685561|ref|ZP_08386145.1| FdrA [Escherichia coli H299] gi|331077262|gb|EGI48476.1| FdrA [Escherichia coli H299] Length = 519 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 38/170 (22%), Positives = 80/170 (47%), Gaps = 9/170 (5%) Query: 50 TGGNVNVPVFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL 108 TG + P ++ A E AN ++I VP A I+++ + +++ ++ + + Sbjct: 93 TGSGIKTPEKVSLEMALEAEPEANLALISVPGDYAAAEAIKALNLGMNVMM-FSDNVSIA 151 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 +K + ++GP+C G + +G ++ ++G++G++ SGT E Sbjct: 152 QEKSIKTLARERQRIVMGPDC-GTAIVNGIPLGF--ANVVKRGAIGVIGASGTGLQEVTC 208 Query: 169 QTSQEGLGQSTAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGE 214 + Q G+G S A+G GG + + G + L+ D+ T IV++ + Sbjct: 209 RIDQLGVGISQALGTGGHDLSEEIGGISMLFALDALAQDDETRVIVLISK 258 >gi|72057964|ref|XP_796094.1| PREDICTED: similar to ATP-citrate lyase, partial [Strongylocentrotus purpuratus] Length = 120 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 21/114 (18%) Query: 95 IPLIVCITEGIP------VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG------- 141 I I I EGIP ++DM K S +IGP G + P KIG Sbjct: 1 IKTIAIIAEGIPENKTRILIDMA------NKKSVTIIGPATVGGIKPGCFKIGNTGGMLD 54 Query: 142 -IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 I+ ++R GSV +SRSG ++ E S+ G V IGGD + G F+ Sbjct: 55 NILSSKLYRPGSVSYVSRSGGMSNELNNIISRNADGVYEGVAIGGDRL-GNNFM 107 >gi|254521505|ref|ZP_05133560.1| acetyltransferase, GNAT family [Stenotrophomonas sp. SKA14] gi|219719096|gb|EED37621.1| acetyltransferase, GNAT family [Stenotrophomonas sp. SKA14] Length = 908 Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 9/172 (5%) Query: 91 IEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 ++A I L + EG L +V+A R++GP+C G++ P + + + Sbjct: 94 VQAAIILTAHLGEGPGSLS-AQVEAVARAHGLRILGPHCLGVIAPHARLNASIAAHFPQA 152 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G + ++S S + V +G S V +G +F D+L+ F D T +I+ Sbjct: 153 GDLALISESSAIAAALVEWGVARSVGFSAVVSLGD--TMDVDFGDLLDYFATDYRTRAIL 210 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT--APPGRTMGHAGAV 260 + E ++A +F+ R KP+V +G+ PG H A+ Sbjct: 211 LYVE----QIKDARKFMSAARAAARAKPVVVVKSGRAERVQPGSRDTHVQAL 258 >gi|312880794|ref|ZP_07740594.1| FdrA family protein [Aminomonas paucivorans DSM 12260] gi|310784085|gb|EFQ24483.1| FdrA family protein [Aminomonas paucivorans DSM 12260] Length = 510 Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 89/180 (49%), Gaps = 11/180 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN +++ V AGD +E + ++ +++ ++ + + V +K + ++GP+C Sbjct: 115 ANLAIVSVAGRYAGDVALECLGRDLNVML-YSDNVSLEKEVEIKKVAREKGLLVMGPDC- 172 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK- 189 G + +G+ + G V +++ +GT E Q ++ G+G +G GG VK Sbjct: 173 GTIIVRGVAMGM--ANACPTGPVSLVAAAGTGLQEVHVQLAKRGVGTLHGIGTGGRDVKA 230 Query: 190 --GTEFIDV-LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 G +++ ++ LAD+ + +V+VG+ E Q + + + G K ++GF+ G+ Sbjct: 231 EVGGLMVEMGVQTLLADDEVKVLVVVGK---PPAPEVEQKILAQVRAGGKPAVLGFIGGE 287 >gi|148257026|ref|YP_001241611.1| hypothetical protein BBta_5753 [Bradyrhizobium sp. BTAi1] gi|146409199|gb|ABQ37705.1| hypothetical protein BBta_5753 [Bradyrhizobium sp. BTAi1] Length = 897 Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 6/123 (4%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 ++ RLIGPNC GI+ P + GS+ ++S+SG + V +Q G+G Sbjct: 120 QRYGMRLIGPNCLGIMMPAIKLNASFSAHMPVAGSLALISQSGAIAAGMVDWAAQRGVGF 179 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V IG + D+L+ F D T +I++ E A ++A +F+ R K Sbjct: 180 SGIVSIGD--QLDVDLADLLDHFALDGGTRAILLYIE----AVKDARKFMSAARGAARVK 233 Query: 238 PIV 240 P+V Sbjct: 234 PVV 236 >gi|320646179|gb|EFX15119.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H- str. 493-89] Length = 652 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|331669335|ref|ZP_08370183.1| putative CoA binding domain protein [Escherichia coli TA271] gi|331064529|gb|EGI36440.1| putative CoA binding domain protein [Escherichia coli TA271] Length = 652 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|226331065|ref|ZP_03806583.1| hypothetical protein PROPEN_04995 [Proteus penneri ATCC 35198] gi|225201860|gb|EEG84214.1| hypothetical protein PROPEN_04995 [Proteus penneri ATCC 35198] Length = 889 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 8/136 (5%) Query: 113 VKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 +K ++ RL+GPN G+L P P + +KG + +S+S + + Sbjct: 110 IKLLCQQYHIRLLGPNSLGLLAPWQGLNASFSPLPV-KKGKLAFISQSAAVANTILDWAY 168 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +G S + +G + + + D+L+ D T +I++ E ++A +F+ Sbjct: 169 YRNIGFSYFIALGDN--QDIQVDDLLDFLARDSKTSAILLHLE----HIKDARRFMSASR 222 Query: 232 KRGRKKPIVGFVAGKT 247 R KPI+ +G+T Sbjct: 223 SASRNKPILVIKSGRT 238 >gi|119871998|ref|YP_930005.1| CoA-binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119673406|gb|ABL87662.1| CoA-binding domain protein [Pyrobaculum islandicum DSM 4184] Length = 461 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 7/154 (4%) Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGI-MPGSIFRK---GSVGILSRSGTLTYEAVFQ 169 KA ++ R++GPNC G+ + I +P + G + ++S+SG + + Sbjct: 116 KAVAKQYGIRVLGPNCIGVYNAYTNFDTIFLPADRAGRPPPGPLALISQSGAVAAAIMDW 175 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 ++ +G V G + + TE +++LE F AD+ + I + E G EA++FL+ Sbjct: 176 AARRKIGLGLMVNYG-NKIDITE-VELLEAFAADDRIKVITLYIE-GFKYPGEASRFLES 232 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISG 263 K KKP+V + AG+ R + A ++G Sbjct: 233 VRKIVPKKPVVVYKAGRGRAAQRAVKSHTAAMAG 266 >gi|194432759|ref|ZP_03065044.1| bacterial FdrA protein [Shigella dysenteriae 1012] gi|194419021|gb|EDX35105.1| bacterial FdrA protein [Shigella dysenteriae 1012] gi|332097368|gb|EGJ02349.1| protein fdrA [Shigella dysenteriae 155-74] Length = 555 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVG 154 ++ ++ + + D +++K R + ++GP+C + I P ++ +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDC------GTSMIAATPLAFANVMPEGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ AD +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADAKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|72162527|ref|YP_290184.1| hypothetical protein Tfu_2128 [Thermobifida fusca YX] gi|71916259|gb|AAZ56161.1| conserved hypothetical protein [Thermobifida fusca YX] Length = 907 Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 8/92 (8%) Query: 123 RLIGPNCPGILTPD---SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R++GPNC G+ D S + P ++ +G +G S+SG L + + +Q GLG ST Sbjct: 313 RVVGPNCLGVANTDPKVSLNATLSP-NLPPRGRIGFFSQSGALGRAILERVAQRGLGLST 371 Query: 180 AVGIGGDP-VKGTEFIDVLELFLADEATESIV 210 V G V G D+L+ + D ATE ++ Sbjct: 372 FVSAGNRADVSGN---DLLQYWEEDPATEVVL 400 >gi|170767638|ref|ZP_02902091.1| CoA binding domain/acetyltransferase domain protein [Escherichia albertii TW07627] gi|170123972|gb|EDS92903.1| CoA binding domain/acetyltransferase domain protein [Escherichia albertii TW07627] Length = 886 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++ ++ + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEELRTCAQRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|261340883|ref|ZP_05968741.1| acetyltransferase, GNAT family [Enterobacter cancerogenus ATCC 35316] gi|288317315|gb|EFC56253.1| acetyltransferase, GNAT family [Enterobacter cancerogenus ATCC 35316] Length = 887 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 15/141 (10%) Query: 123 RLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R++GPN G+L P P I RKG + +S+S ++ + Q +G S + Sbjct: 120 RILGPNSLGLLAPWQGLNASFSPVPI-RKGKLAFISQSAAVSNTILDWAQQREMGFSYFI 178 Query: 182 GIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + GD + IDV EL FLA D T +I++ E +A +F+ R KP Sbjct: 179 AL-GDSLD----IDVDELLDFLARDSKTSAILLYLE----HLSDARRFVSAARSASRNKP 229 Query: 239 IVGFVAGKTAPPGRTM-GHAG 258 I+ +G++ R + H+G Sbjct: 230 ILVIKSGRSPAAQRLLHSHSG 250 >gi|295097885|emb|CBK86975.1| Acyl-CoA synthetase (NDP forming) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 887 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 15/143 (10%) Query: 119 KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + R++GPN G+L P P I RKG + +S+S ++ + Q +G Sbjct: 116 RYQMRILGPNSLGLLAPWQGLNASFSPVPI-RKGKLAFISQSAAVSNTILDWAQQREMGF 174 Query: 178 STAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 S + +G + IDV EL FLA D T +I++ E +A +F+ Sbjct: 175 SYFIALG-----DSLDIDVDELLDFLARDSKTSAILLYLE----HLSDARRFVSASRSAS 225 Query: 235 RKKPIVGFVAGKTAPPGRTMGHA 257 R KPI+ +G++ P + + H+ Sbjct: 226 RNKPILVIKSGRS-PAAQRLLHS 247 >gi|1841540|gb|AAB47486.1| ATP citrate lyase [Drosophila melanogaster] Length = 391 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 8/99 (8%) Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRT---MGHAGAVI 261 T+ IV++GE+GG+ E + LKD GR KP+V + G A + GHAG+ Sbjct: 1 TKLIVLLGEVGGTEEYDVCAALKD----GRITKPLVAWCIGTCASMFTSEVQFGHAGSCA 56 Query: 262 SGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 + + A K +++AG + S +G + + G L Sbjct: 57 NSDRETATAKNKGLRDAGAYVPDSFDTLGELIHHVYGEL 95 >gi|218780872|ref|YP_002432190.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762256|gb|ACL04722.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 484 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 23/188 (12%) Query: 87 IIESIEA----EIPLIVCITEGIPVL---------DMVRVKARLEKSSSRLIGPNCPGIL 133 ++E++EA I ++C+T G + ++VR+ EK R IGPNC G+ Sbjct: 86 VLEAMEACGKKGIKNVICVTAGFKEVGGEGPEREKELVRIA---EKYGIRFIGPNCIGVT 142 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 + + G +G+ S+SG+ + + G STA +G + Sbjct: 143 NASAKLNTTFLADNSKPGCIGLASQSGSFVTQMFNYLDRMDQGFSTAFSVGNG--ANIDL 200 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG-FVAGKTAPPGR 252 +D LE A T+ I + E G A +F++ KPIV +V G Sbjct: 201 VDCLEYLGASPDTKVIALYVE--GIA--RGREFMETAKAIVPHKPIVAIYVGGSETGKRA 256 Query: 253 TMGHAGAV 260 T H G + Sbjct: 257 TFSHTGTM 264 >gi|124027867|ref|YP_001013187.1| hypothetical protein Hbut_0995 [Hyperthermus butylicus DSM 5456] gi|123978561|gb|ABM80842.1| universally conserved protein [Hyperthermus butylicus DSM 5456] Length = 476 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 18/138 (13%) Query: 112 RVKARLEKSSSRLIGPNCPGILTP---------DSCKIGIMPGSIFRKGSVGILSRSGTL 162 R+ + K R++GPNC G+ +P D K G +PG KG + +S+SG L Sbjct: 122 RLLEVVRKHGIRMLGPNCLGVYSPSTGINATFLDPEKQG-LPG----KGPIAFISQSGAL 176 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 + G S + IG + D+L D T+SI M I G A E Sbjct: 177 GAALLDWLDANQFGISKFISIGNK--ADIDEADLLAYLRKDPETKSIAMY--IEGVAPGE 232 Query: 223 AAQFLKDEAKRGRKKPIV 240 +F + + +KP+V Sbjct: 233 GGRFRRALEETTHEKPVV 250 >gi|332295195|ref|YP_004437118.1| CoA-binding domain protein [Thermodesulfobium narugense DSM 14796] gi|332178298|gb|AEE13987.1| CoA-binding domain protein [Thermodesulfobium narugense DSM 14796] Length = 711 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 18/137 (13%) Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK--------GSVGILSRSGTLTYEAVFQT 170 K S R+IGPNC GI S + S K G++ LS+SG + Sbjct: 132 KYSMRIIGPNCLGIYDAKSR----LDTSFLSKQKQARPGPGNIAFLSQSGAFLAAIMDWA 187 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + E +G S + G+ V E +D+++ + D+ TE I + E +E F + Sbjct: 188 ASEKIGISKGISY-GNKVDVNE-LDLIDYLIEDDDTEVICLYIE----GVDEPRVFFEKA 241 Query: 231 AKRGRKKPIVGFVAGKT 247 + +KKPI+ +G T Sbjct: 242 SIASKKKPILIMKSGLT 258 >gi|218703802|ref|YP_002411321.1| membrane protein FdrA [Escherichia coli UMN026] gi|293403639|ref|ZP_06647730.1| membrane protein FdrA [Escherichia coli FVEC1412] gi|298379249|ref|ZP_06989130.1| membrane protein FdrA [Escherichia coli FVEC1302] gi|300897255|ref|ZP_07115696.1| membrane protein FdrA [Escherichia coli MS 198-1] gi|218430899|emb|CAR11773.1| putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli UMN026] gi|291429492|gb|EFF02512.1| membrane protein FdrA [Escherichia coli FVEC1412] gi|298280362|gb|EFI21866.1| membrane protein FdrA [Escherichia coli FVEC1302] gi|300358968|gb|EFJ74838.1| membrane protein FdrA [Escherichia coli MS 198-1] Length = 555 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVG 154 ++ ++ + + D +++K R ++GP+C + I P ++ +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKTRARDKGLLVMGPDC------GTSMIAATPLAFANVMPEGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ AD +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADAKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|57642062|ref|YP_184540.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus kodakarensis KOD1] gi|57160386|dbj|BAD86316.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus kodakarensis KOD1] Length = 440 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 55/127 (43%), Gaps = 9/127 (7%) Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 KAR K RLIGPNC GI G + + G + ++S+SG A+ + E Sbjct: 115 KAR--KHGVRLIGPNCAGIFGVHGKFFGSFEVRV-KPGGLALISQSGAFGGAALAMGNDE 171 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G S V G D LE F DE T++I + E ++ +FL Sbjct: 172 RIGFSAFVSYGNAADLNES--DFLEYFADDENTKAIALYIE----GVKDGRRFLNALRYA 225 Query: 234 GRKKPIV 240 KKPI+ Sbjct: 226 SSKKPII 232 >gi|308271260|emb|CBX27869.1| Uncharacterized protein MJ0590 [uncultured Desulfobacterium sp.] Length = 729 Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust. Identities = 45/194 (23%), Positives = 88/194 (45%), Gaps = 30/194 (15%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCIT--------EGIPVLDMVRVKARLEKSSSR 123 + ++I +PP+ A A E+IE ++ +V ++ +G+ + + + R K R Sbjct: 78 DLAIIILPPAVAIKAAHEAIEKKVKGLVIVSAGFREVGGKGLEIENEIVSVCR--KEGIR 135 Query: 124 LIGPNCPGILTPD-----SCKIGI-MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +IGPNC G++ P+ + + MP + G++ +S+SG L + + G Sbjct: 136 IIGPNCLGVINPNPLVRLNASFSVRMP----KFGNISFISQSGALCTAVLDFAADMDFGF 191 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK----R 233 S + IG + +D+L+ D TE I++ E +F++D K Sbjct: 192 SKFISIGNKA--DVDELDLLKYLHKDLDTEVIMIYLE----ELRRGPEFIEDVKKITLGN 245 Query: 234 GRKKPIVGFVAGKT 247 + PI+ +G+T Sbjct: 246 IKPTPIIAIKSGRT 259 >gi|219852506|ref|YP_002466938.1| CoA-binding domain protein [Methanosphaerula palustris E1-9c] gi|219546765|gb|ACL17215.1| CoA-binding domain protein [Methanosphaerula palustris E1-9c] Length = 676 Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 15/169 (8%) Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRK-GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +S R++GPN GI+ P +I + K G + +S+SG + V + G+G S Sbjct: 349 NSIRVVGPNSLGIMLP-GARINTTFDPVTPKGGYLAFISQSGAVITMIVDWSLPVGIGFS 407 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +G G F D L+L D AT+++++ E + FLK + KP Sbjct: 408 LVASVGNQADLG--FQDYLKLAEQDPATKAVILYIE----ELRDGCGFLKVARRITVTKP 461 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN--AMKEAGICIAPS 285 ++ AG +A +G A G +D + A+ +AG+ +A S Sbjct: 462 VIAVKAGSSA-----IGRTSASSHTGSLAGDDPVYRAALTQAGVVMARS 505 >gi|213859698|ref|ZP_03385402.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 522 Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A RL+GPN G+L P P I ++G + +S+ Sbjct: 38 CIILSAPTSQHEELLASARHYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQ 96 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 97 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 150 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 151 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 200 Query: 276 KEAGI 280 + AG+ Sbjct: 201 QRAGL 205 >gi|134098360|ref|YP_001104021.1| acetyl-CoA synthetase [Saccharopolyspora erythraea NRRL 2338] gi|291006938|ref|ZP_06564911.1| acetyl-CoA synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133910983|emb|CAM01096.1| possible acetyl-CoA synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 891 Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 24/190 (12%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL--DMVRVKARLEKSSS----RLI 125 + +V+ +P +G + + + + +V ++ G D ++ R+ +++ R++ Sbjct: 267 DLAVVAIPAAGVDEVLDACLAKGVKALVIVSSGFSEAGPDGREIERRMVRAARVHGMRVV 326 Query: 126 GPNCPGILTPD------SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 GPN G++ D + +PG +G G +SG L + ++ GLG ST Sbjct: 327 GPNALGVVNTDPGYRVNATLAPRLPG----RGRTGFFCQSGALGVAILATAAERGLGLST 382 Query: 180 AVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V G V G D+L+ + D T+ +++ E G+ +F + + R KP Sbjct: 383 FVSAGNRADVSGN---DLLQYWQTDPGTDVVLLYLESFGNPR----KFARLARRLARTKP 435 Query: 239 IVGFVAGKTA 248 IV +G+ A Sbjct: 436 IVVVKSGRNA 445 >gi|260856678|ref|YP_003230569.1| fused putative acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli O26:H11 str. 11368] gi|260869270|ref|YP_003235672.1| fused putative acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli O111:H- str. 11128] gi|257755327|dbj|BAI26829.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli O26:H11 str. 11368] gi|257765626|dbj|BAI37121.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli O111:H- str. 11128] gi|323156244|gb|EFZ42403.1| acetyltransferase family protein [Escherichia coli EPECa14] gi|323177285|gb|EFZ62873.1| acetyltransferase family protein [Escherichia coli 1180] Length = 886 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQRKMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|320176118|gb|EFW51185.1| Protein acetyltransferase [Shigella dysenteriae CDC 74-1112] Length = 886 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQRKMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|301024871|ref|ZP_07188508.1| CoA binding domain protein [Escherichia coli MS 69-1] gi|300396402|gb|EFJ79940.1| CoA binding domain protein [Escherichia coli MS 69-1] Length = 886 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEELRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|119719253|ref|YP_919748.1| CoA-binding domain-containing protein [Thermofilum pendens Hrk 5] gi|119524373|gb|ABL77745.1| CoA-binding domain protein [Thermofilum pendens Hrk 5] Length = 508 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 20/145 (13%) Query: 118 EKSSSRLIGPNCPGILTPDS-CKIGIMPGSIF-------------RKGSVGILSRSGTLT 163 +K R+IGPNC G+ +P S +P + KG V ++S+SG + Sbjct: 125 KKHGIRIIGPNCIGVYSPWSGVDTIFLPYTKVLEDGREVLNAPRPSKGFVALISQSGAVG 184 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 A+ EG+G S V IG + ++++E D+ T I++ E + Sbjct: 185 TAALDYMYGEGIGLSHFVSIGNK--ADVDEVELVEYLGGDDRTRVILLYLE----NIKRG 238 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTA 248 +F++ K KKP+V AG+T+ Sbjct: 239 REFIEVAGKVTLKKPVVVLKAGRTS 263 >gi|82545039|ref|YP_408986.1| hypothetical protein SBO_2616 [Shigella boydii Sb227] gi|187731968|ref|YP_001881365.1| acetyltransferase, GNAT family protein [Shigella boydii CDC 3083-94] gi|81246450|gb|ABB67158.1| conserved hypothetical protein [Shigella boydii Sb227] gi|187428960|gb|ACD08234.1| acetyltransferase, GNAT family protein [Shigella boydii CDC 3083-94] gi|320186387|gb|EFW61121.1| Protein acetyltransferase [Shigella flexneri CDC 796-83] gi|332092615|gb|EGI97687.1| acetyltransferase family protein [Shigella boydii 3594-74] Length = 886 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQRKMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|318061281|ref|ZP_07980002.1| acyl-CoA synthetase [Streptomyces sp. SA3_actG] Length = 1004 Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 20/195 (10%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP---VLDMVR 112 VP F TV E E + +V+ VP +A+ E E + +V I+ G R Sbjct: 290 VPAFRTVKEIGEDV--DLAVVVVPAERVPEAVAECGEHGVRGLVVISAGYGESVTAGRAR 347 Query: 113 VKARLEKSSS---RLIGPNCPGILTPDSC---KIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + + ++ S RL+GPN G++ D + P + +G VG+ ++SG + Sbjct: 348 QRRLVRQARSYGMRLVGPNAFGLVNTDPAVRLNASLAP-ELAPRGRVGLFTQSGAIGIAL 406 Query: 167 VFQTSQEGLGQSTAVGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + + Q G G ST V G V G DVL+ + D T+ +M E G+ + Sbjct: 407 LSELHQRGTGLSTFVSAGNRADVSGN---DVLQYWYDDPDTDVALMYLESIGNPR----K 459 Query: 226 FLKDEAKRGRKKPIV 240 F + + KP+V Sbjct: 460 FTRLARRAAATKPLV 474 >gi|302537390|ref|ZP_07289732.1| acyl-CoA synthetase [Streptomyces sp. C] gi|302446285|gb|EFL18101.1| acyl-CoA synthetase [Streptomyces sp. C] Length = 928 Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 17/139 (12%) Query: 123 RLIGPNCPGILTP------DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 RLIGPN G++ ++C + P +G +G+ ++SG + + + G G Sbjct: 333 RLIGPNAFGVINTAPEVELNAC---LAPAPASARGPIGLFTQSGAIGIALLSALLRRGEG 389 Query: 177 QSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 S+ V G V G D+L+ + DEAT+ +M E G+ +F + + Sbjct: 390 LSSFVSAGNRADVSGN---DILQYWYEDEATDVALMYLETLGNPR----KFTRLARRTAA 442 Query: 236 KKPIVGFVAGKTAPPGRTM 254 KP+V + G+ P G + Sbjct: 443 VKPVVVALGGRHTPAGHVV 461 >gi|170019133|ref|YP_001724087.1| GCN5-related N-acetyltransferase [Escherichia coli ATCC 8739] gi|169754061|gb|ACA76760.1| GCN5-related N-acetyltransferase [Escherichia coli ATCC 8739] Length = 886 Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQRKMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|21233410|ref|NP_639327.1| hypothetical protein XCC3988 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770375|ref|YP_245137.1| hypothetical protein XC_4078 [Xanthomonas campestris pv. campestris str. 8004] gi|21115250|gb|AAM43209.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575707|gb|AAY51117.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 902 Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 6/135 (4%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 RV+A R++GP+C G++ P + + + G + ++S S + V Sbjct: 114 RVEATARAKGMRILGPHCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGV 173 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +G S V +G +F D+L+ F D T +I++ E G +A +F+ Sbjct: 174 ARSVGFSAVVSLGD--TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAAR 227 Query: 232 KRGRKKPIVGFVAGK 246 R KP+V +G+ Sbjct: 228 AAARAKPVVVVKSGR 242 >gi|13362921|dbj|BAB36873.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] Length = 484 Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|257056724|ref|YP_003134556.1| acyl-CoA synthetase (NDP forming) [Saccharomonospora viridis DSM 43017] gi|256586596|gb|ACU97729.1| acyl-CoA synthetase (NDP forming) [Saccharomonospora viridis DSM 43017] Length = 926 Score = 40.4 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 10/129 (7%) Query: 123 RLIGPNCPGILTPD-SCKI-GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R++GPN G+L D + ++ + + R+G G +SG L + GLG ST Sbjct: 335 RVVGPNALGVLNTDPTVRLNATLAPRLPRRGRTGFFCQSGALGIAILADAEARGLGLSTF 394 Query: 181 VGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V G V G D+L+ + D T+ +++ E G+ +F + + R KPI Sbjct: 395 VSAGNRADVSGN---DLLQYWETDPRTDVVLLYLESFGNPR----KFARLARRLARSKPI 447 Query: 240 VGFVAGKTA 248 V +G+ A Sbjct: 448 VAVKSGRHA 456 >gi|147920675|ref|YP_685524.1| acetyl-CoA synthetase (ADP-forming), alpha and beta subunit fusion [uncultured methanogenic archaeon RC-I] gi|110620920|emb|CAJ36198.1| acetyl-CoA synthetase (ADP-forming), alpha and beta subunit fusion [uncultured methanogenic archaeon RC-I] Length = 694 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 19/199 (9%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKSSS-------- 122 + +VI +P A+ E E I ++ I+ G V V+ ARLE Sbjct: 66 DLAVIVIPARFVAQAVKECGEKGIKNVIIISAG---FKEVGVEGARLENEVKEVAKSYGI 122 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPNC G+L S + +G + I+S+SG L + + + +G + V Sbjct: 123 RIVGPNCLGVLNTYSGCNASFAKKMPPRGHMSIISQSGALGTAILDWSEKTDIGFANFVS 182 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 G ID ++ + D+ T I+ E + + +F+ + R+KPIV Sbjct: 183 FGNK--ADLNEIDFMQAWKDDKETNIILAYLE----SITDGQRFINVAREVSREKPIVII 236 Query: 243 VAGKTAPPGRTM-GHAGAV 260 +G+T+ R H G++ Sbjct: 237 KSGRTSAGARAASSHTGSL 255 >gi|18977457|ref|NP_578814.1| hypothetical protein PF1085 [Pyrococcus furiosus DSM 3638] gi|18893154|gb|AAL81209.1| hypothetical protein PF1085 [Pyrococcus furiosus DSM 3638] Length = 442 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 19/211 (9%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 ++PK G G N+ + K + S+I +P + +I ++ V Sbjct: 41 VNPKGGEVEVAGKKFNI-------KEKLDEPVDVSIIAIPAKLVPE-LIRGLKGLTKGAV 92 Query: 100 CITEGIPVLDMVRVKARLEKSSS----RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGI 155 I+ G + V ++ L K++ R+IGPNC GI + G + G + + Sbjct: 93 VISAGFSEVGNVELEKELIKAAKEAGIRVIGPNCAGIFGVHAKFYGSFEVRV-NPGGLAL 151 Query: 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEI 215 +S+SG A+ ++EG+G S V G + D L F DE T I + E Sbjct: 152 ISQSGAFGGAALAMGNEEGIGFSAFVSYGN--AADLDESDFLRFFADDENTRVIGLYIE- 208 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 ++ +FL KKP++ AGK Sbjct: 209 ---GVKDGRKFLDALRYAASKKPVIILKAGK 236 >gi|333023988|ref|ZP_08452052.1| putative acyl-CoA synthetase [Streptomyces sp. Tu6071] gi|332743840|gb|EGJ74281.1| putative acyl-CoA synthetase [Streptomyces sp. Tu6071] Length = 988 Score = 40.4 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 20/195 (10%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP---VLDMVR 112 VP F TV E E + +V+ VP +A+ E E + +V I+ G R Sbjct: 274 VPAFRTVKEIGEDV--DLAVVVVPAERVPEAVAECGEYGVRGLVVISAGYGESVTAGRAR 331 Query: 113 VKARLEKSSS---RLIGPNCPGILTPDSC---KIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + + ++ S RL+GPN G++ D + P + +G VG+ ++SG + Sbjct: 332 QRRLVRQARSYGMRLVGPNAFGLVNTDPAVRLNASLAP-ELAPRGRVGLFTQSGAIGIAL 390 Query: 167 VFQTSQEGLGQSTAVGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + + Q G G ST V G V G DVL+ + D T+ +M E G+ + Sbjct: 391 LSELHQRGTGLSTFVSAGNRADVSGN---DVLQYWYDDPDTDVALMYLESIGNPR----K 443 Query: 226 FLKDEAKRGRKKPIV 240 F + + KP+V Sbjct: 444 FTRLARRAAATKPLV 458 >gi|297273034|ref|XP_001108114.2| PREDICTED: ATP-citrate synthase isoform 2 [Macaca mulatta] Length = 1011 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 8/105 (7%) Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTA 248 G+ F+D + + + IV++GEIGG+ E + + +K+ GR KPIV + G A Sbjct: 604 GSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGIKE----GRLTKPIVCWCIGTCA 659 Query: 249 PPGRT---MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 + GHAGA + A K A+KEAG+ + S +G Sbjct: 660 TMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELG 704 >gi|213585712|ref|ZP_03367538.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 498 Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPTSQHEELLASARHYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|218698776|ref|YP_002406405.1| putative enzyme with acyl-CoA domain [Escherichia coli IAI39] gi|218368762|emb|CAR16506.1| putative enzyme with acyl-CoA domain [Escherichia coli IAI39] Length = 515 Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust. Identities = 44/196 (22%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ +++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLNVML-FSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFCGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE IV++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|188993575|ref|YP_001905585.1| Putative acetyltransferase (GNAT) family protein [Xanthomonas campestris pv. campestris str. B100] gi|167735335|emb|CAP53549.1| Putative acetyltransferase (GNAT) family protein [Xanthomonas campestris pv. campestris] Length = 902 Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 6/135 (4%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 RV+A R++GP+C G++ P + + + G + ++S S + V Sbjct: 114 RVEATARAKGMRILGPHCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGV 173 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +G S V +G +F D+L+ F D T +I++ E G +A +F+ Sbjct: 174 ARSVGFSAVVSLGD--TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAAR 227 Query: 232 KRGRKKPIVGFVAGK 246 R KP+V +G+ Sbjct: 228 AAARAKPVVVVKSGR 242 >gi|16130509|ref|NP_417079.1| inhibiting acetyltransferase for acetyl-CoA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|89109390|ref|AP_003170.1| fused predicted acyl-CoA synthetase NAD(P)-binding subunit and ATP-binding subunit [Escherichia coli str. K-12 substr. W3110] gi|157162064|ref|YP_001459382.1| CoA-binding domain/acetyltransferase domain-containing protein [Escherichia coli HS] gi|170082193|ref|YP_001731513.1| fused acyl-CoA synthetase: NAD(P)-binding subunit; ATP-binding subunit [Escherichia coli str. K-12 substr. DH10B] gi|238901749|ref|YP_002927545.1| fused putative acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli BW2952] gi|256021729|ref|ZP_05435594.1| fused putative acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia sp. 4_1_40B] gi|300951695|ref|ZP_07165515.1| CoA binding domain protein [Escherichia coli MS 116-1] gi|300958773|ref|ZP_07170886.1| CoA binding domain protein [Escherichia coli MS 175-1] gi|301648349|ref|ZP_07248089.1| CoA binding domain protein [Escherichia coli MS 146-1] gi|307139222|ref|ZP_07498578.1| fused putative acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli H736] gi|312973170|ref|ZP_07787342.1| acetyltransferase family protein [Escherichia coli 1827-70] gi|331643208|ref|ZP_08344343.1| putative CoA binding domain protein [Escherichia coli H736] gi|2495644|sp|P76594|YFIQ_ECOLI RecName: Full=Uncharacterized protein yfiQ gi|1788938|gb|AAC75637.1| inhibiting acetyltransferase for acetyl-CoA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|85675472|dbj|BAE76754.1| fused predicted acyl-CoA synthetase NAD(P)-binding subunit and ATP-binding subunit [Escherichia coli str. K12 substr. W3110] gi|157067744|gb|ABV06999.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli HS] gi|169890028|gb|ACB03735.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit; ATP-binding subunit [Escherichia coli str. K-12 substr. DH10B] gi|238861220|gb|ACR63218.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli BW2952] gi|260448336|gb|ACX38758.1| GCN5-related N-acetyltransferase [Escherichia coli DH1] gi|300314581|gb|EFJ64365.1| CoA binding domain protein [Escherichia coli MS 175-1] gi|300449057|gb|EFK12677.1| CoA binding domain protein [Escherichia coli MS 116-1] gi|301073625|gb|EFK88431.1| CoA binding domain protein [Escherichia coli MS 146-1] gi|309702970|emb|CBJ02301.1| putative acyl-CoA synthetase [Escherichia coli ETEC H10407] gi|310331765|gb|EFP99000.1| acetyltransferase family protein [Escherichia coli 1827-70] gi|315137208|dbj|BAJ44367.1| fused putative acyl-CoA synthetase:NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli DH1] gi|315615846|gb|EFU96478.1| acetyltransferase family protein [Escherichia coli 3431] gi|323936324|gb|EGB32615.1| acetyltransferase [Escherichia coli E1520] gi|331040006|gb|EGI12226.1| putative CoA binding domain protein [Escherichia coli H736] gi|332344459|gb|AEE57793.1| acetyltransferase [Escherichia coli UMNK88] Length = 886 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQRKMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|301021929|ref|ZP_07185888.1| CoA binding domain protein [Escherichia coli MS 196-1] gi|299881396|gb|EFI89607.1| CoA binding domain protein [Escherichia coli MS 196-1] Length = 886 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQRKMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|294815543|ref|ZP_06774186.1| Putative acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064] gi|326443893|ref|ZP_08218627.1| putative acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294328142|gb|EFG09785.1| Putative acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064] Length = 1203 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 36/242 (14%) Query: 30 LYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT--AANASVIYVPPSGAGDAI 87 LY + GG G T G VP F +VAE T A + +V+ VP +A+ Sbjct: 243 LYAVNRAFGG-----GRTEVEG----VPAFRSVAEIAAATGEAVDLAVVAVPVERVPEAV 293 Query: 88 IESIEAEIPLIVCIT--------EGIPVLDMVRVKARLEKSSSRLIGPNCPGIL-TPDSC 138 + E + +V +T EG + +AR R+IGPN GI+ T D+ Sbjct: 294 ADCGEHGVRGLVVLTAGYAESGAEGRRRQRELVRRAR--SYGMRIIGPNSLGIISTADAV 351 Query: 139 KIG--IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP-VKGTEFID 195 ++ + PGS G +G+ ++SG + + + + G G ST + G V G +F Sbjct: 352 RLNASLAPGSPA-PGRIGLFTQSGAIGIALLSELHRRGAGLSTFISSGNRADVSGNDF-- 408 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV---GFVAGKTAPPGR 252 L+ + D T+ ++M E G+ +F + + KP+V G + PPG Sbjct: 409 -LQYWYDDPDTDVVLMYLESIGNPR----KFTRLARRTAAVKPLVVVKGARHSGSEPPGH 463 Query: 253 TM 254 + Sbjct: 464 AV 465 >gi|300920752|ref|ZP_07137158.1| CoA binding domain protein [Escherichia coli MS 115-1] gi|300412323|gb|EFJ95633.1| CoA binding domain protein [Escherichia coli MS 115-1] Length = 886 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQRKMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|254384493|ref|ZP_04999834.1| acyl-CoA synthetase [Streptomyces sp. Mg1] gi|194343379|gb|EDX24345.1| acyl-CoA synthetase [Streptomyces sp. Mg1] Length = 676 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 20/163 (12%) Query: 123 RLIGPNCPGILT--PD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPN G++ PD + P +G +G+ ++SG + + + G G S+ Sbjct: 348 RLIGPNAFGVINTAPDVELNASLAPAPAPARGRIGLFTQSGAIGIALLSALVRRGAGLSS 407 Query: 180 AVGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V G V G D+L+ + DEAT+ ++ E G+ +F + + KP Sbjct: 408 FVSAGNRADVSGN---DILQYWYEDEATDVALLYLETLGNPR----KFSRLARRTAAVKP 460 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGI 280 +V G+ P AG V+ G + ++D ++A +++AG+ Sbjct: 461 VVVAKGGRHTP-------AGHVVPGTR-LSDDTVSALLRQAGV 495 >gi|157157254|ref|YP_001463908.1| CoA-binding domain/acetyltransferase domain-containing protein [Escherichia coli E24377A] gi|191167989|ref|ZP_03029791.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli B7A] gi|193068407|ref|ZP_03049370.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli E110019] gi|194429281|ref|ZP_03061808.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli B171] gi|256017266|ref|ZP_05431131.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Shigella sp. D9] gi|260845270|ref|YP_003223048.1| fused putative acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli O103:H2 str. 12009] gi|300904232|ref|ZP_07122091.1| CoA binding domain protein [Escherichia coli MS 84-1] gi|300927039|ref|ZP_07142791.1| CoA binding domain protein [Escherichia coli MS 182-1] gi|301330314|ref|ZP_07222961.1| CoA binding domain protein [Escherichia coli MS 78-1] gi|307313845|ref|ZP_07593461.1| GCN5-related N-acetyltransferase [Escherichia coli W] gi|309794361|ref|ZP_07688784.1| CoA binding domain protein [Escherichia coli MS 145-7] gi|332278258|ref|ZP_08390671.1| CoA-binding domain/acetyltransferase domain-containing protein [Shigella sp. D9] gi|157079284|gb|ABV18992.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli E24377A] gi|190901996|gb|EDV61743.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli B7A] gi|192958359|gb|EDV88799.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli E110019] gi|194412689|gb|EDX28984.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli B171] gi|257760417|dbj|BAI31914.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli O103:H2 str. 12009] gi|300403765|gb|EFJ87303.1| CoA binding domain protein [Escherichia coli MS 84-1] gi|300416923|gb|EFK00234.1| CoA binding domain protein [Escherichia coli MS 182-1] gi|300843648|gb|EFK71408.1| CoA binding domain protein [Escherichia coli MS 78-1] gi|306906346|gb|EFN36861.1| GCN5-related N-acetyltransferase [Escherichia coli W] gi|308121817|gb|EFO59079.1| CoA binding domain protein [Escherichia coli MS 145-7] gi|315061903|gb|ADT76230.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli W] gi|315256612|gb|EFU36580.1| CoA binding domain protein [Escherichia coli MS 85-1] gi|323159157|gb|EFZ45148.1| acetyltransferase family protein [Escherichia coli E128010] gi|323377516|gb|ADX49784.1| GCN5-related N-acetyltransferase [Escherichia coli KO11] gi|332100610|gb|EGJ03956.1| CoA-binding domain/acetyltransferase domain-containing protein [Shigella sp. D9] Length = 886 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|225570563|ref|ZP_03779588.1| hypothetical protein CLOHYLEM_06665 [Clostridium hylemonae DSM 15053] gi|225160576|gb|EEG73195.1| hypothetical protein CLOHYLEM_06665 [Clostridium hylemonae DSM 15053] Length = 1003 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 27/188 (14%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPL-----IVCITEGIPVLDMVRVKARLEKSSSRLI 125 AN +VI +P + A ++EA+ L + ++ + + D +++K + + ++ Sbjct: 116 ANLAVISIPGAYA------ALEADRALDEGMNVFMFSDNVTLEDEIKLKNKAHEKGLAVM 169 Query: 126 GPNC-PGIL--TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 GP+C GI+ P + + PGSI GI+ SGT E + G G A+G Sbjct: 170 GPDCGTGIIQGVPVAFTNNVTPGSI------GIIGASGTGIQELTTIIDRLGEGVKNAIG 223 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 GG V GT +D++E +D + + ++++ + +E + D RK Sbjct: 224 TGGRDLSIEVGGTTMMDMIEAMESDTSVKVLIIISK---PPAKEVRDRISDRLSNFRKPV 280 Query: 239 IVGFVAGK 246 I F+ K Sbjct: 281 ITLFLGEK 288 >gi|298290381|ref|YP_003692320.1| CoA-binding protein [Starkeya novella DSM 506] gi|296926892|gb|ADH87701.1| CoA-binding domain protein [Starkeya novella DSM 506] Length = 731 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 7/90 (7%) Query: 122 SRLIGPNCPGILTPDSCKIGI-MPGSIFRK-GSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +R++GPNC G +P + G+ P ++ G++G++S+SG LT + + + GL S Sbjct: 382 ARILGPNCLGTYSP---RGGLTFPAEAPKEVGTIGVISQSGGLTTDIIKRGEWRGLRFSG 438 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESI 209 AV IG E ++L +LAD T +I Sbjct: 439 AVTIGNS--ADVEPHELLAYYLADPQTRAI 466 >gi|209920064|ref|YP_002294148.1| hypothetical protein ECSE_2873 [Escherichia coli SE11] gi|300817638|ref|ZP_07097853.1| CoA binding domain protein [Escherichia coli MS 107-1] gi|300820735|ref|ZP_07100885.1| CoA binding domain protein [Escherichia coli MS 119-7] gi|331678581|ref|ZP_08379256.1| putative CoA binding domain protein [Escherichia coli H591] gi|209913323|dbj|BAG78397.1| conserved hypothetical protein [Escherichia coli SE11] gi|300526488|gb|EFK47557.1| CoA binding domain protein [Escherichia coli MS 119-7] gi|300529626|gb|EFK50688.1| CoA binding domain protein [Escherichia coli MS 107-1] gi|323184536|gb|EFZ69910.1| acetyltransferase family protein [Escherichia coli 1357] gi|323944584|gb|EGB40653.1| acetyltransferase [Escherichia coli H120] gi|324019982|gb|EGB89201.1| CoA binding domain protein [Escherichia coli MS 117-3] gi|331075041|gb|EGI46361.1| putative CoA binding domain protein [Escherichia coli H591] Length = 886 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|331654047|ref|ZP_08355048.1| putative CoA binding domain protein [Escherichia coli M718] gi|331048896|gb|EGI20972.1| putative CoA binding domain protein [Escherichia coli M718] Length = 886 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|91211912|ref|YP_541898.1| hypothetical protein UTI89_C2907 [Escherichia coli UTI89] gi|91073486|gb|ABE08367.1| hypothetical protein YfiQ [Escherichia coli UTI89] Length = 886 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|293415853|ref|ZP_06658496.1| hypothetical protein ECDG_02420 [Escherichia coli B185] gi|291433501|gb|EFF06480.1| hypothetical protein ECDG_02420 [Escherichia coli B185] Length = 886 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|117624806|ref|YP_853719.1| acyl-CoA synthetase (NDP forming) [Escherichia coli APEC O1] gi|218559506|ref|YP_002392419.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli S88] gi|237705094|ref|ZP_04535575.1| acyl-CoA synthetase [Escherichia sp. 3_2_53FAA] gi|115513930|gb|ABJ02005.1| acyl-CoA synthetase (NDP forming) [Escherichia coli APEC O1] gi|218366275|emb|CAR04022.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli S88] gi|226901460|gb|EEH87719.1| acyl-CoA synthetase [Escherichia sp. 3_2_53FAA] gi|294493259|gb|ADE92015.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli IHE3034] gi|307625867|gb|ADN70171.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli UM146] gi|315288000|gb|EFU47402.1| CoA binding domain protein [Escherichia coli MS 110-3] gi|323949238|gb|EGB45129.1| acetyltransferase [Escherichia coli H252] gi|323955820|gb|EGB51578.1| acetyltransferase [Escherichia coli H263] Length = 886 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|82778012|ref|YP_404361.1| hypothetical protein SDY_2827 [Shigella dysenteriae Sd197] gi|309784594|ref|ZP_07679229.1| acetyltransferase, GNAT family [Shigella dysenteriae 1617] gi|81242160|gb|ABB62870.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|308927491|gb|EFP72963.1| acetyltransferase, GNAT family [Shigella dysenteriae 1617] Length = 886 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|332088096|gb|EGI93221.1| acetyltransferase family protein [Shigella boydii 5216-82] Length = 886 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|293446939|ref|ZP_06663361.1| hypothetical protein ECCG_01089 [Escherichia coli B088] gi|291323769|gb|EFE63197.1| hypothetical protein ECCG_01089 [Escherichia coli B088] Length = 881 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 92 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 150 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 151 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 204 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 205 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 241 >gi|222034289|emb|CAP77030.1| Uncharacterized protein yfiQ [Escherichia coli LF82] gi|312947156|gb|ADR27983.1| hypothetical protein NRG857_12835 [Escherichia coli O83:H1 str. NRG 857C] Length = 886 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|124485685|ref|YP_001030301.1| hypothetical protein Mlab_0863 [Methanocorpusculum labreanum Z] gi|124363226|gb|ABN07034.1| CoA-binding domain protein [Methanocorpusculum labreanum Z] Length = 707 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 18/132 (13%) Query: 123 RLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG--LG 176 R++GPNC G++ P D+ + P G + +S+SG + V + EG +G Sbjct: 378 RIVGPNCLGLILPPFKLDTTYVSTSP----LPGDIAFISQSGAIVNAVVGISLSEGSEMG 433 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM-VGEIGGSAEEEAAQFLKDEAKRGR 235 S V +G +F+D + D T+SI++ V EI + F++ + + Sbjct: 434 YSEVVSVGNQ--CDLDFLDYMSYAARDPHTKSIILYVEEI-----KNGVAFMEMAKEITQ 486 Query: 236 KKPIVGFVAGKT 247 KPIV AG + Sbjct: 487 TKPIVAIKAGSS 498 >gi|331698817|ref|YP_004335056.1| CoA-binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326953506|gb|AEA27203.1| CoA-binding domain protein [Pseudonocardia dioxanivorans CB1190] Length = 680 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 8/103 (7%) Query: 113 VKARLEKSSSRLIGPNCPGILT-PDSCKIGIMPGSI-FRKGSVGILSRSGTLTYEAVFQT 170 + A + S RL+GPN G L P + +PG+ + G V +++ SG + + F Sbjct: 114 LAAVVRDSGIRLLGPNTSGFLVPPRALTASFVPGAASVQAGRVAVVAASGGVNHALAFLL 173 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFI--DVLELFLADEATESIVM 211 ++ G G S AVG+G G + DVL D +T ++ + Sbjct: 174 AEAGHGISLAVGLG----NGVDVTAPDVLAHLATDASTGAVAL 212 >gi|331674033|ref|ZP_08374796.1| putative CoA binding domain protein [Escherichia coli TA280] gi|331069306|gb|EGI40698.1| putative CoA binding domain protein [Escherichia coli TA280] Length = 886 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|331648331|ref|ZP_08349420.1| putative CoA binding domain protein [Escherichia coli M605] gi|330912352|gb|EGH40862.1| protein acetyltransferase [Escherichia coli AA86] gi|331042880|gb|EGI15021.1| putative CoA binding domain protein [Escherichia coli M605] Length = 886 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|224372805|ref|YP_002607177.1| CoA binding domain protein [Nautilia profundicola AmH] gi|223589267|gb|ACM93003.1| CoA binding domain protein [Nautilia profundicola AmH] Length = 634 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 15/165 (9%) Query: 123 RLIGPNCPGILTPDSCKIGI-MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +IGPNC GI D+ K+ + S GS+G++S+SG + + + S G S + Sbjct: 334 NIIGPNCLGIYN-DTLKLNLTFAKSRIYSGSIGLVSQSGAVLTALLDKASHYKTGFSHII 392 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G + F + + ++I + E + +FLK A R +KP++ Sbjct: 393 SMGN--MADFNFAHAVNELNRQKNCKTISIYAE----GLQFGKEFLK--AIRNLQKPVLL 444 Query: 242 FVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 F +GK+ + H G + G E I+ K AG I S Sbjct: 445 FKSGKSKEAKKAAFSHTGNI----AGNYEMIISLSKSAGAVIKDS 485 >gi|331658729|ref|ZP_08359673.1| putative CoA binding domain protein [Escherichia coli TA206] gi|331054394|gb|EGI26421.1| putative CoA binding domain protein [Escherichia coli TA206] Length = 886 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|227887620|ref|ZP_04005425.1| CoA-binding domain/acetyltransferase domain protein [Escherichia coli 83972] gi|227835970|gb|EEJ46436.1| CoA-binding domain/acetyltransferase domain protein [Escherichia coli 83972] gi|307554603|gb|ADN47378.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli ABU 83972] Length = 886 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|218701099|ref|YP_002408728.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli IAI39] gi|218371085|emb|CAR18914.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli IAI39] Length = 886 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|332766586|gb|EGJ96791.1| acetyltransferase family protein [Shigella flexneri 2930-71] Length = 865 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 76 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 134 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 135 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 188 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 189 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 225 >gi|315300560|gb|EFU59789.1| CoA binding domain protein [Escherichia coli MS 16-3] Length = 886 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|331664153|ref|ZP_08365063.1| putative CoA binding domain protein [Escherichia coli TA143] gi|331059952|gb|EGI31929.1| putative CoA binding domain protein [Escherichia coli TA143] Length = 886 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|281179633|dbj|BAI55963.1| conserved hypothetical protein [Escherichia coli SE15] Length = 886 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|188491676|ref|ZP_02998946.1| acetyltransferase, GNAT family protein [Escherichia coli 53638] gi|188486875|gb|EDU61978.1| acetyltransferase, GNAT family protein [Escherichia coli 53638] Length = 886 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|320662741|gb|EFX30080.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O55:H7 str. USDA 5905] Length = 886 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|320182091|gb|EFW56995.1| Protein acetyltransferase [Shigella boydii ATCC 9905] Length = 886 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|194432051|ref|ZP_03064340.1| CoA binding domain/acetyltransferase domain protein [Shigella dysenteriae 1012] gi|194419580|gb|EDX35660.1| CoA binding domain/acetyltransferase domain protein [Shigella dysenteriae 1012] gi|332089194|gb|EGI94301.1| acetyltransferase family protein [Shigella dysenteriae 155-74] Length = 886 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|289806949|ref|ZP_06537578.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 209 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A RL+GPN G+L P P I ++G + +S+ Sbjct: 24 CIILSAPTSQHEELLASARHYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQ 82 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 83 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 136 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 137 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 186 Query: 276 KEAGI 280 + AG+ Sbjct: 187 QRAGL 191 >gi|13022193|gb|AAK11684.1|AF342826_6 YahF/FdrA-like protein [Enterobacter cloacae] gi|12644699|gb|AAK00490.1| YahF/FdrA-like protein [Acidovorax citrulli] Length = 514 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 11/121 (9%) Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GP+C G + +G + R+G +G+++ SGT E + G G S A G Sbjct: 169 MMGPDC-GTAIINGVPVGF--ANAVRRGRIGVIAASGTGAQEVTSLIHELGSGISQAFGT 225 Query: 184 GG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 GG VKG L+ L D+ T+ IV++ + A E AA L D AK G KPI Sbjct: 226 GGRDLSSAVKGRMARFALKALLDDDMTDVIVLISK--PPAPEVAASIL-DTAK-GTSKPI 281 Query: 240 V 240 V Sbjct: 282 V 282 >gi|26248950|ref|NP_754990.1| hypothetical protein c3109 [Escherichia coli CFT073] gi|300982308|ref|ZP_07176016.1| CoA binding domain protein [Escherichia coli MS 45-1] gi|301047223|ref|ZP_07194315.1| CoA binding domain protein [Escherichia coli MS 185-1] gi|26109356|gb|AAN81558.1|AE016764_240 Hypothetical protein yfiQ [Escherichia coli CFT073] gi|300300900|gb|EFJ57285.1| CoA binding domain protein [Escherichia coli MS 185-1] gi|300408795|gb|EFJ92333.1| CoA binding domain protein [Escherichia coli MS 45-1] gi|315294519|gb|EFU53867.1| CoA binding domain protein [Escherichia coli MS 153-1] Length = 886 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|14591547|ref|NP_143629.1| hypothetical protein PH1789 [Pyrococcus horikoshii OT3] gi|3258225|dbj|BAA30908.1| 472aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 472 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 10/129 (7%) Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIFRK---GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R+IGPNC G+ PD+ +P + G + +S+SG + + G+G Sbjct: 136 RVIGPNCVGVYVPDTGVDTVFLPDEKMDRPPSGPIAFISQSGAFAAAMLDWAAMAGIGIG 195 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V G + D++E F D+ E VM I G ++ +F++ + + KP Sbjct: 196 KMVSYGNK--IDVDDADLMEYFAHDD--EIKVMTFYIEGV--KDGRKFMETAKRVTKIKP 249 Query: 239 IVGFVAGKT 247 I+ +G+T Sbjct: 250 IIALKSGRT 258 >gi|333000444|gb|EGK20026.1| acetyltransferase family protein [Shigella flexneri VA-6] Length = 886 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|323978386|gb|EGB73471.1| acetyltransferase [Escherichia coli TW10509] Length = 886 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|333015953|gb|EGK35288.1| acetyltransferase family protein [Shigella flexneri K-227] Length = 886 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|325569046|ref|ZP_08145293.1| hypothetical protein HMPREF9087_1582 [Enterococcus casseliflavus ATCC 12755] gi|325157504|gb|EGC69662.1| hypothetical protein HMPREF9087_1582 [Enterococcus casseliflavus ATCC 12755] Length = 584 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC- 129 A +V+ +P + A I E+ A + C ++ + + + VR+K + L+GP+C Sbjct: 114 AKVAVLSIPGTMAAPEI-ETALAAGKHVFCFSDNVSLEEEVRLKKLAHEKGLLLMGPDCG 172 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 GIL +I + + RKG +G++ SGT E + G + A+G GG +K Sbjct: 173 TGILN----EIPVAFTNAVRKGKIGVVGASGTGIQEVTTIIHKLAAGVTQAIGTGGRDLK 228 Query: 190 ----GTEFIDVLELFLADEATESIVMVGE 214 G D + D TE IV++ + Sbjct: 229 EAVGGITMKDSILALEHDPDTEVIVVISK 257 >gi|320657076|gb|EFX24895.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 886 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|150400008|ref|YP_001323775.1| CoA-binding domain-containing protein [Methanococcus vannielii SB] gi|150012711|gb|ABR55163.1| CoA-binding domain protein [Methanococcus vannielii SB] Length = 706 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 14/197 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM----VRVKARLEKSSSRLI 125 A + ++ +P DA+ E + I + IT G D +++K ++K R I Sbjct: 68 AIDLVILAIPAEYTVDAMEECGKKGIKSAIIITAGFSESDNKDLELKLKNVIDKYKIRTI 127 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 GPNC G++ S + G++ +S+SG + + LG S V +G Sbjct: 128 GPNCLGVINLYSNLNASFSKEFSKIGNIAFISQSGAILTALLDIAEYSNLGFSKIVSMGN 187 Query: 186 D-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 ++ E + LE D T+ I + I G + +F+ + RKKP++ + Sbjct: 188 KIDIQEDEILRYLE---NDPNTKVIALY--IEGLKD---GKFISAAKRISRKKPVIVLKS 239 Query: 245 GKTAPPGRTM-GHAGAV 260 G++ + + H G++ Sbjct: 240 GRSKEGAKAVSSHTGSL 256 >gi|324113110|gb|EGC07086.1| acetyltransferase [Escherichia fergusonii B253] Length = 886 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|324008441|gb|EGB77660.1| CoA binding domain protein [Escherichia coli MS 57-2] Length = 886 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 8/157 (5%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGS 218 S ++ + Q +G S + +G + ++L+ D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIALGDS--LDIDIDELLDYLARDSKTSAILLYLE---- 209 Query: 219 AEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|110806528|ref|YP_690048.1| hypothetical protein SFV_2647 [Shigella flexneri 5 str. 8401] gi|110616076|gb|ABF04743.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] Length = 886 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|110642746|ref|YP_670476.1| hypothetical protein ECP_2586 [Escherichia coli 536] gi|191174006|ref|ZP_03035523.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli F11] gi|300974111|ref|ZP_07172461.1| CoA binding domain protein [Escherichia coli MS 200-1] gi|110344338|gb|ABG70575.1| hypothetical protein YfiQ [Escherichia coli 536] gi|190905697|gb|EDV65319.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli F11] gi|300308934|gb|EFJ63454.1| CoA binding domain protein [Escherichia coli MS 200-1] gi|324014371|gb|EGB83590.1| CoA binding domain protein [Escherichia coli MS 60-1] Length = 886 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|215487927|ref|YP_002330358.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli O127:H6 str. E2348/69] gi|312965500|ref|ZP_07779732.1| acetyltransferase, GNAT family [Escherichia coli 2362-75] gi|215265999|emb|CAS10409.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli O127:H6 str. E2348/69] gi|312289920|gb|EFR17808.1| acetyltransferase, GNAT family [Escherichia coli 2362-75] Length = 886 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|308273328|emb|CBX29931.1| hypothetical protein N47_F16260 [uncultured Desulfobacterium sp.] Length = 899 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 2/102 (1%) Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 +K E S R+IGPNC GI+ S G + G + +S+SG + + + + Sbjct: 120 IKKEAESSGIRVIGPNCLGIVCTKSNLNASFAGQMPIMGKMAFISQSGAICSSILDLSIK 179 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 E +G S V +G + +F D+++ D SIVM E Sbjct: 180 EQIGFSYFVSVGS--MLDVDFGDMIDFIGQDPNVGSIVMYVE 219 >gi|331684234|ref|ZP_08384830.1| putative CoA binding domain protein [Escherichia coli H299] gi|331079186|gb|EGI50388.1| putative CoA binding domain protein [Escherichia coli H299] Length = 886 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|212224787|ref|YP_002308023.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus onnurineus NA1] gi|212009744|gb|ACJ17126.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus onnurineus NA1] Length = 438 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 106/266 (39%), Gaps = 20/266 (7%) Query: 21 GTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 G+F E AI Y + V GG + GG V + K +A++I + Sbjct: 14 GSFK-EGAIAYEILRNIVEGGFDGRIVPVNPKGGTVEIAGKAFEIRPKLEEPVDAAIIAI 72 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGPNCPGILT 134 P ++I+ I I V I+ G + V ++ L K R+IGPNC GI Sbjct: 73 PAKFV-PSLIDEIGELIKGAVVISAGFSEVGNVELERELVEKARKHGIRIIGPNCAGIFG 131 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 G + + G + ++S+SG A+ + E +G S V G Sbjct: 132 VHGKFFGSFEVRV-KPGGLALISQSGAFGGAALAMGNDERIGFSAFVSYGNAADLNES-- 188 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM 254 D L F D+ T++I + E + +F++ KKP++ AGK+ R Sbjct: 189 DFLRYFADDKNTKAIALYIE----GVRDGRRFMEALRYAAGKKPVIILKAGKSKSGARAA 244 Query: 255 G-HAGAVISGGKGGAEDKINAMKEAG 279 H G++ G E A K+AG Sbjct: 245 ASHTGSL----AGSYEIYRAAFKQAG 266 >gi|15803112|ref|NP_289143.1| hypothetical protein Z3869 [Escherichia coli O157:H7 EDL933] gi|168752073|ref|ZP_02777095.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC4113] gi|168768690|ref|ZP_02793697.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC4486] gi|168773486|ref|ZP_02798493.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC4196] gi|168778564|ref|ZP_02803571.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC4076] gi|168790386|ref|ZP_02815393.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC869] gi|168801704|ref|ZP_02826711.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC508] gi|195936732|ref|ZP_03082114.1| hypothetical protein EscherichcoliO157_09760 [Escherichia coli O157:H7 str. EC4024] gi|208808315|ref|ZP_03250652.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. EC4206] gi|208812815|ref|ZP_03254144.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. EC4045] gi|208819903|ref|ZP_03260223.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. EC4042] gi|209400567|ref|YP_002272059.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. EC4115] gi|217327406|ref|ZP_03443489.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. TW14588] gi|254794536|ref|YP_003079373.1| putative acyl-CoA synthetase: NAD(P)-binding subunit and ATP-binding subunit [Escherichia coli O157:H7 str. TW14359] gi|261222980|ref|ZP_05937261.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and ATP-binding subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261259470|ref|ZP_05952003.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and ATP-binding subunit [Escherichia coli O157:H7 str. FRIK966] gi|291283861|ref|YP_003500679.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O55:H7 str. CB9615] gi|12517006|gb|AAG57701.1|AE005488_12 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|187770740|gb|EDU34584.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC4196] gi|188013994|gb|EDU52116.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC4113] gi|189003230|gb|EDU72216.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC4076] gi|189362335|gb|EDU80754.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC4486] gi|189370148|gb|EDU88564.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC869] gi|189376180|gb|EDU94596.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC508] gi|208728116|gb|EDZ77717.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. EC4206] gi|208734092|gb|EDZ82779.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. EC4045] gi|208740026|gb|EDZ87708.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. EC4042] gi|209161967|gb|ACI39400.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. EC4115] gi|217319773|gb|EEC28198.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. TW14588] gi|254593936|gb|ACT73297.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and ATP-binding subunit [Escherichia coli O157:H7 str. TW14359] gi|290763734|gb|ADD57695.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O55:H7 str. CB9615] gi|320188925|gb|EFW63584.1| Protein acetyltransferase [Escherichia coli O157:H7 str. EC1212] gi|320640833|gb|EFX10327.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. G5101] gi|320651474|gb|EFX19870.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H- str. H 2687] gi|320667561|gb|EFX34481.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. LSU-61] gi|326340390|gb|EGD64194.1| Protein acetyltransferase [Escherichia coli O157:H7 str. 1125] gi|326345073|gb|EGD68817.1| Protein acetyltransferase [Escherichia coli O157:H7 str. 1044] Length = 886 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|152994673|ref|YP_001339508.1| GCN5-like N-acetyltransferase [Marinomonas sp. MWYL1] gi|150835597|gb|ABR69573.1| GCN5-related N-acetyltransferase [Marinomonas sp. MWYL1] Length = 810 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 8/124 (6%) Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L K + RL+GPN GI P + + G + ++S+SGT+ V + +G+G Sbjct: 120 LRKHNVRLLGPNSFGICRPKQGVFAWLGLTQPLSGRLALMSQSGTVASALVDWATWQGIG 179 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM-VGEIGGSAEEEAAQFLKDEAKRGR 235 S V +G PV VL+ D +++I+M + +IG +FL GR Sbjct: 180 FSQVVSMGS-PVDVMP-SQVLDYLSTDFDSQAILMYLQKIG-----RPTRFLSSLRATGR 232 Query: 236 KKPI 239 KP+ Sbjct: 233 SKPV 236 >gi|52549001|gb|AAU82850.1| conserved hypothetical protein [uncultured archaeon GZfos1D1] Length = 448 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 19/162 (11%) Query: 123 RLIGPNCPGIL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPN G + T + I+P + G + +++SGT V + + +G V Sbjct: 122 RMIGPNTFGFINTHLNLNASIIP-QMPVIGGISFVTQSGTFGLALVDWAASQQMGLHLVV 180 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G+G + D+L AD T++I+M E E +F+ D A R R KP++ Sbjct: 181 GVGNK--ADVDDSDILAYLSADRHTKTIMMYIE----GIERGRRFI-DVASRIR-KPVIA 232 Query: 242 FVAGKTAPPGRTMGHAGAVISG-GKGGAEDKIN--AMKEAGI 280 KT GR++ + AV+S G D+I A K+AG+ Sbjct: 233 L---KT---GRSLAGSKAVLSHTGSLAGTDRIYDGAFKQAGV 268 >gi|332525600|ref|ZP_08401755.1| GCN5-like protein N-acetyltransferase [Rubrivivax benzoatilyticus JA2] gi|332109165|gb|EGJ10088.1| GCN5-like protein N-acetyltransferase [Rubrivivax benzoatilyticus JA2] Length = 885 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 6/125 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP+C G+L P G++ +S+SG L + + G+G S Sbjct: 114 RVLGPDCLGLLNPRLKLNASFAHVTAAPGTLAFVSQSGALVTALLDWAAARGVGFSLFAS 173 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G +F D+++ +D T +I++ E +A +F+ R KP++ Sbjct: 174 LGEQ--LDVDFGDLIDHLASDAHTRAILLYVET----VTDARKFMSAARAAARNKPVLIV 227 Query: 243 VAGKT 247 AG+T Sbjct: 228 KAGRT 232 >gi|300927711|ref|ZP_07143279.1| CoA binding domain protein [Escherichia coli MS 187-1] gi|300464264|gb|EFK27757.1| CoA binding domain protein [Escherichia coli MS 187-1] gi|323941153|gb|EGB37338.1| acetyltransferase [Escherichia coli E482] Length = 886 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|293411000|ref|ZP_06654576.1| yfiQ protein [Escherichia coli B354] gi|291471468|gb|EFF13952.1| yfiQ protein [Escherichia coli B354] Length = 886 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|253772516|ref|YP_003035347.1| GCN5-related N-acetyltransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162559|ref|YP_003045667.1| acyl-CoA synthetase NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli B str. REL606] gi|242378184|emb|CAQ32959.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit, ATP-binding subunit [Escherichia coli BL21(DE3)] gi|253323560|gb|ACT28162.1| GCN5-related N-acetyltransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974460|gb|ACT40131.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli B str. REL606] gi|253978627|gb|ACT44297.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli BL21(DE3)] Length = 886 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|170682351|ref|YP_001746152.1| acyl-CoA synthetase [Escherichia coli SMS-3-5] gi|170520069|gb|ACB18247.1| bacterial FdrA protein [Escherichia coli SMS-3-5] Length = 519 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 72/148 (48%), Gaps = 8/148 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I VP A I+++ + +++ ++ + ++ +K + ++GP+C Sbjct: 115 ANLALISVPGDYAAAEAIKALNLGMNVMM-FSDNVSIVQEKSIKTLARERQRIVMGPDC- 172 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG----D 186 G + +G ++ ++G++G++ SGT E + Q G G S A+G GG + Sbjct: 173 GTAIVNGIPLGF--ANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGHDLSE 230 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGE 214 + G + L+ D+ T IV++ + Sbjct: 231 EIGGISMLFALDALAQDDETRVIVLISK 258 >gi|325496338|gb|EGC94197.1| CoA-binding domain/acetyltransferase domain-containing protein [Escherichia fergusonii ECD227] Length = 886 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|282165588|ref|YP_003357973.1| acetyl-CoA synthetase [Methanocella paludicola SANAE] gi|282157902|dbj|BAI62990.1| acetyl-CoA synthetase [Methanocella paludicola SANAE] Length = 696 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 31/223 (13%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS--------SS 122 + +VI +P A+ E E I +V I+ G V V+ ARLE + Sbjct: 66 DLAVIVIPSKLVPQAVRECGEKGIKYLVIISAG---FKEVGVEGARLENEVKDIARSFNM 122 Query: 123 RLIGPNCPGIL-TPDSCKIGI---MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R++GPNC GIL T C MP + G+V I+++SG L + + +G Sbjct: 123 RIVGPNCLGILNTHTKCNASFAKKMPPA----GNVSIITQSGALGTAILDWSDATDVGFD 178 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V +G ID +E + D+ T+ I+ E + +F+ + + KP Sbjct: 179 CFVSLGNK--SDLNEIDFMEAWKNDDNTKVILAYLE----GITDGRRFIDVAREVSKTKP 232 Query: 239 IVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGI 280 ++ +G+T+ R + H G++ G A D +A ++G+ Sbjct: 233 VIVVKSGRTSAGARAVSSHTGSL--AGSDAAYD--SAFMQSGV 271 >gi|24113925|ref|NP_708435.1| hypothetical protein SF2646 [Shigella flexneri 2a str. 301] gi|30063985|ref|NP_838156.1| hypothetical protein S2819 [Shigella flexneri 2a str. 2457T] gi|24053028|gb|AAN44142.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30042241|gb|AAP17966.1| hypothetical protein S2819 [Shigella flexneri 2a str. 2457T] gi|281601996|gb|ADA74980.1| putative Acyl-CoA synthetase (NDP forming) [Shigella flexneri 2002017] gi|313648263|gb|EFS12707.1| acetyltransferase, GNAT family [Shigella flexneri 2a str. 2457T] gi|332753994|gb|EGJ84368.1| acetyltransferase family protein [Shigella flexneri 4343-70] gi|332755832|gb|EGJ86190.1| acetyltransferase family protein [Shigella flexneri 2747-71] gi|332761978|gb|EGJ92251.1| acetyltransferase family protein [Shigella flexneri K-671] gi|333000855|gb|EGK20427.1| acetyltransferase family protein [Shigella flexneri K-218] gi|333001677|gb|EGK21244.1| acetyltransferase family protein [Shigella flexneri K-272] gi|333016835|gb|EGK36161.1| acetyltransferase family protein [Shigella flexneri K-304] Length = 886 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|323173097|gb|EFZ58728.1| acetyltransferase family protein [Escherichia coli LT-68] Length = 886 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|218555168|ref|YP_002388081.1| acyl-CoA synthetase NAD(P)-binding/ATP-binding subunit [Escherichia coli IAI1] gi|218696213|ref|YP_002403880.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli 55989] gi|218352945|emb|CAU98744.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli 55989] gi|218361936|emb|CAQ99537.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli IAI1] gi|320200148|gb|EFW74737.1| Protein acetyltransferase [Escherichia coli EC4100B] gi|324118206|gb|EGC12102.1| acetyltransferase [Escherichia coli E1167] Length = 886 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|323188301|gb|EFZ73593.1| acetyltransferase family protein [Escherichia coli RN587/1] Length = 886 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|317154738|ref|YP_004122786.1| CoA-binding domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316944989|gb|ADU64040.1| CoA-binding domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 700 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 91/216 (42%), Gaps = 17/216 (7%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL--DMVRVKARLEKSSSR----LI 125 + +V+ +P + E EA + + IT G D ++ R+ + R L+ Sbjct: 72 DLAVVVLPRQDVLRTLDELAEARVGAVCVITAGFRETGRDGFELEMRMADLARRKNITLL 131 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 GPN G++ + + ++ +GS+G S+SG L + EG+G S V +G Sbjct: 132 GPNSLGLINTECGLNATIAQAMPARGSIGFFSQSGALCSAILDWADGEGVGFSKFVSLGN 191 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 DVLE D T V++G + + ++ +FL+ KP++ AG Sbjct: 192 KAALSEA--DVLEALGDDPDTR--VIIGYL--ESVDDGEKFLRKARAVTGTKPVIMIKAG 245 Query: 246 KTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGI 280 T R T H G++ G A ++AGI Sbjct: 246 TTPSGARATSSHTGSM----AGSLVASTAAFRQAGI 277 >gi|74313147|ref|YP_311566.1| hypothetical protein SSON_2710 [Shigella sonnei Ss046] gi|73856624|gb|AAZ89331.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|323167777|gb|EFZ53472.1| acetyltransferase family protein [Shigella sonnei 53G] Length = 886 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|301307259|ref|ZP_07213277.1| acetyltransferase, GNAT family [Escherichia coli MS 124-1] gi|300837552|gb|EFK65312.1| acetyltransferase, GNAT family [Escherichia coli MS 124-1] Length = 830 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 41 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 99 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 100 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 153 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 154 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 190 >gi|300939943|ref|ZP_07154572.1| bacterial FdrA protein [Escherichia coli MS 21-1] gi|300455205|gb|EFK18698.1| bacterial FdrA protein [Escherichia coli MS 21-1] Length = 519 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 72/148 (48%), Gaps = 8/148 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I VP A I+++ + +++ ++ + ++ +K + ++GP+C Sbjct: 115 ANLALISVPGDYAAAEAIKALNLGMNVMM-FSDNVSIVQEKSIKTLARERQRIVMGPDC- 172 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG----D 186 G + +G ++ ++G++G++ SGT E + Q G G S A+G GG + Sbjct: 173 GTAIVNGIPLGF--ANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGHDLSE 230 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGE 214 + G + L+ D+ T IV++ + Sbjct: 231 EIGGISMLFALDALAQDDETRVIVLISK 258 >gi|194437641|ref|ZP_03069737.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli 101-1] gi|194423447|gb|EDX39438.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli 101-1] gi|323961199|gb|EGB56812.1| acetyltransferase [Escherichia coli H489] gi|323971089|gb|EGB66336.1| acetyltransferase [Escherichia coli TA007] Length = 886 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|320101090|ref|YP_004176682.1| branched-chain acyl-CoA synthetase (ADP-forming) subunit alpha [Desulfurococcus mucosus DSM 2162] gi|319753442|gb|ADV65200.1| branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit [Desulfurococcus mucosus DSM 2162] Length = 461 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 14/176 (7%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGP 127 + +++ VP + E + + V IT G + V ++ R+ K R++GP Sbjct: 67 DVAIVTVPADAVPKVMEECGRKGVKVAVIITSGFSEVGNVELENRIVETARKYGMRILGP 126 Query: 128 NCPG-ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 N G + TP S P + KG++ ++S+SG L + T +G S + +G Sbjct: 127 NIFGYVYTPSSINATFGPLEV-AKGNIALISQSGALGIALMGWTIMNEIGLSALLSVG-- 183 Query: 187 PVKGTEFIDVLEL--FLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +DV EL +LAD+ ++ + + G + +F++ K KKP+V Sbjct: 184 ---NMADLDVAELSEYLADDPNTRVITI-YLEGIKPGKGGEFVEKMRKVTLKKPVV 235 >gi|302349008|ref|YP_003816646.1| Acetyl coenzym A synthetase (ADP-forming) [Acidilobus saccharovorans 345-15] gi|302329420|gb|ADL19615.1| Acetyl coenzym A synthetase (ADP-forming) [Acidilobus saccharovorans 345-15] Length = 712 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 15/171 (8%) Query: 118 EKSSSRLIGPNCPGIL-TPDSCKIGIMPGSIFRK---GSVGILSRSGTLTYEAVFQTSQE 173 ++ S R++GPNC G+ + + +P R+ G + I+S+SG L + + Sbjct: 123 KRYSMRILGPNCIGVYNSANGVDTFFLPEERMRRPRPGPIAIISQSGALLATLMDWAAAN 182 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G S A+ G + ID L +LA + ++++ G + E ++ + Sbjct: 183 NVGISKAINFGNK--VDIDEIDSLN-YLAGASDVKVILMYLEGVTKGRELVDAIR-KVTY 238 Query: 234 GRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKIN-AMKEAGICI 282 G +KP++ G+TA R T+ H ++ G+ D AM EA + Sbjct: 239 GSRKPVLVLKGGRTAEGSRATLSHTASI-----AGSYDVFKEAMSEANAIV 284 >gi|298530844|ref|ZP_07018246.1| GCN5-related N-acetyltransferase [Desulfonatronospira thiodismutans ASO3-1] gi|298510218|gb|EFI34122.1| GCN5-related N-acetyltransferase [Desulfonatronospira thiodismutans ASO3-1] Length = 901 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 6/129 (4%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 RV ++ S R++GP+C GI+ P S + +G + +S+S L + Sbjct: 118 RVLKTAKEHSMRILGPDCLGIIVPRSGLNASFGHTDIAQGKIAFVSQSDALGIAVLDWAG 177 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +G+G S + +G +F D+++ D + SI++ E + A +F+ Sbjct: 178 SKGIGFSHFISLGD--CLDIDFGDIIDYLKGDPHSTSILLYME----SVSNARKFISAAR 231 Query: 232 KRGRKKPIV 240 R KP+V Sbjct: 232 SASRNKPLV 240 >gi|194438649|ref|ZP_03070737.1| bacterial FdrA protein [Escherichia coli 101-1] gi|253775539|ref|YP_003038370.1| FdrA family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163780|ref|YP_003046888.1| hypothetical protein ECB_03714 [Escherichia coli B str. REL606] gi|300929996|ref|ZP_07145429.1| bacterial FdrA protein [Escherichia coli MS 187-1] gi|194422453|gb|EDX38452.1| bacterial FdrA protein [Escherichia coli 101-1] gi|242379366|emb|CAQ34180.1| ybl187 [Escherichia coli BL21(DE3)] gi|253326583|gb|ACT31185.1| FdrA family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975681|gb|ACT41352.1| conserved hypothetical protein [Escherichia coli B str. REL606] gi|253979837|gb|ACT45507.1| conserved hypothetical protein [Escherichia coli BL21(DE3)] gi|300462086|gb|EFK25579.1| bacterial FdrA protein [Escherichia coli MS 187-1] gi|323959092|gb|EGB54761.1| FdrA protein [Escherichia coli H489] gi|323969322|gb|EGB64621.1| FdrA protein [Escherichia coli TA007] gi|332345813|gb|AEE59147.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 519 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 72/148 (48%), Gaps = 8/148 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I VP A I+++ + +++ ++ + ++ +K + ++GP+C Sbjct: 115 ANLALISVPGDYAAAEAIKALNLGMNVMM-FSDNVSIVQEKSIKTLARERQRIVMGPDC- 172 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG----D 186 G + +G ++ ++G++G++ SGT E + Q G G S A+G GG + Sbjct: 173 GTAIVNGIPLGF--ANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGHDLSE 230 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGE 214 + G + L+ D+ T IV++ + Sbjct: 231 EIGGISMLFALDALAQDDETRVIVLISK 258 >gi|260777628|ref|ZP_05886521.1| protein acetyltransferase [Vibrio coralliilyticus ATCC BAA-450] gi|260605641|gb|EEX31926.1| protein acetyltransferase [Vibrio coralliilyticus ATCC BAA-450] Length = 899 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 38/178 (21%), Positives = 78/178 (43%), Gaps = 16/178 (8%) Query: 103 EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTL 162 EGI + D A ++S R++GPN GI+ P ++G + +S+S + Sbjct: 108 EGISIQDACLTIA--QQSGIRILGPNSLGIILPWLNFNASFSPVTAQQGKIAFISQSAAM 165 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 + + + +G S + +G +F D+L+ D TE+I++ + ++ Sbjct: 166 CTTILDWANDKNIGFSAFISLGN--ASDIDFADLLDYLSTDSHTEAILLYVD----TIKD 219 Query: 223 AAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 A +F+ R + I+ GKT+ AG + + G +D ++ + ++ I Sbjct: 220 ARRFMSAARAASRNRRILVLKGGKTS--------AGRLAAQAHTGGDDTLDIIYDSAI 269 >gi|218706090|ref|YP_002413609.1| acyl-CoA synthetase NAD(P)-binding/ATP-binding subunit [Escherichia coli UMN026] gi|293406027|ref|ZP_06650019.1| yfiQ protein [Escherichia coli FVEC1412] gi|298381827|ref|ZP_06991426.1| hypothetical protein ECFG_01567 [Escherichia coli FVEC1302] gi|300895653|ref|ZP_07114253.1| CoA binding domain protein [Escherichia coli MS 198-1] gi|218433187|emb|CAR14085.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli UMN026] gi|284922536|emb|CBG35623.1| putative acyl-CoA synthetase [Escherichia coli 042] gi|291428235|gb|EFF01262.1| yfiQ protein [Escherichia coli FVEC1412] gi|298279269|gb|EFI20783.1| hypothetical protein ECFG_01567 [Escherichia coli FVEC1302] gi|300360413|gb|EFJ76283.1| CoA binding domain protein [Escherichia coli MS 198-1] Length = 886 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|254171864|ref|ZP_04878540.1| acetyl-CoA synthase [Thermococcus sp. AM4] gi|214033760|gb|EEB74586.1| acetyl-CoA synthase [Thermococcus sp. AM4] Length = 473 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 10/129 (7%) Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIFRK---GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R+IGPNC G+ PD+ +P S + G + +S+SG + + G+G Sbjct: 135 RVIGPNCVGVYVPDTGVDTVFLPESKMDRPESGPIAFVSQSGAFAAAMLDWAAGAGIGIG 194 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V G + D+++ F+ D+ + E ++ +F++ + R KP Sbjct: 195 KMVSYGNK--LDVDDADLMDYFIHDDEINVVTFYIE----GVKDGRKFMESAKRITRVKP 248 Query: 239 IVGFVAGKT 247 ++ +G+T Sbjct: 249 VIALKSGRT 257 >gi|306814352|ref|ZP_07448514.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli NC101] gi|305851746|gb|EFM52198.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli NC101] Length = 886 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 8/157 (5%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGS 218 S ++ + Q +G S + +G + ++L+ D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIALGDS--LDIDIDELLDYLARDSKTSAILLYLE---- 209 Query: 219 AEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|281180889|dbj|BAI57219.1| conserved hypothetical protein [Escherichia coli SE15] Length = 519 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I VP A I+++ + +++ ++ + ++ +K + ++GP+C Sbjct: 115 ANLALISVPGDYAAAEAIKALNLGMNVMM-FSDNVSIVQEKSIKTLARERQRIVMGPDC- 172 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK- 189 G + +G ++ ++G++G++ SGT E + Q G G S A+G GG + Sbjct: 173 GTAIVNGIPLGF--ANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGHDLSK 230 Query: 190 ---GTEFIDVLELFLADEATESIVMVGE 214 G + L+ D+ T IV++ + Sbjct: 231 EIGGISMLFALDALAQDDETRVIVLISK 258 >gi|90412269|ref|ZP_01220274.1| Hypothetical protein yahF [Photobacterium profundum 3TCK] gi|90326760|gb|EAS43153.1| Hypothetical protein yahF [Photobacterium profundum 3TCK] Length = 527 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 35/153 (22%), Positives = 74/153 (48%), Gaps = 8/153 (5%) Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLI 125 ++ AN ++I VP A ++++ + +++ ++ + + ++K K ++ Sbjct: 125 EQHPEANLALISVPGEYAAAEAMKALNLGLNVMM-FSDNVSLDSERKIKELALKKDLMVM 183 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 GP+C G + +G ++ R+G++G+++ SGT EA + Q G G S A+G GG Sbjct: 184 GPDC-GTAIINGVPLGF--ANVVRRGAIGVVAASGTGLQEATCRIHQLGEGVSQAMGTGG 240 Query: 186 DPVK----GTEFIDVLELFLADEATESIVMVGE 214 + G + L D T+ IV++ + Sbjct: 241 HDLHQEIGGISMLQGLHALADDPDTQVIVLISK 273 >gi|14520570|ref|NP_126045.1| succinyl-coa synthetase alpha chain related protein [Pyrococcus abyssi GE5] gi|5457786|emb|CAB49276.1| acdA-1 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain [Pyrococcus abyssi GE5] Length = 472 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 10/129 (7%) Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIF---RKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R+IGPNC G+ PD+ +P + G + +S+SG + + G+G Sbjct: 136 RVIGPNCVGVYAPDTGVDTVFLPEEKMDRPKSGPIAFISQSGAFAAAMLDWAAMAGIGIG 195 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V G + D++E F D+ E VM I G ++ +F++ + + KP Sbjct: 196 KMVSYGNKI--DVDDADLMEYFAQDD--EIKVMTFYIEGV--KDGRKFMETAKRVTKIKP 249 Query: 239 IVGFVAGKT 247 I+ +G+T Sbjct: 250 IIALKSGRT 258 >gi|257053345|ref|YP_003131178.1| CoA-binding domain protein [Halorhabdus utahensis DSM 12940] gi|256692108|gb|ACV12445.1| CoA-binding domain protein [Halorhabdus utahensis DSM 12940] Length = 698 Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 29/227 (12%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---------PVLDMVRVKARLEKSSS 122 + +++ VPP + E+ EA + + IT G DM KA E Sbjct: 67 DLAIVVVPPQIVNGVLEEAGEAGVRDVAVITAGFGEAGSEGAARERDM---KAIAEDHDL 123 Query: 123 RLIGPNCPGIL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 L+GPNC G+L T + P S +G++ +S+SG + S +G + V Sbjct: 124 NLVGPNCLGVLSTRRNMNATFSPKSAI-EGNISFMSQSGAFITAVLDWASDHNVGFNDVV 182 Query: 182 GIGGDPVKGT-EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G V +FID E E+ V++G + E F+ + + PIV Sbjct: 183 SLGNKAVLDEGDFIDYW-----GEDPETDVILGYLEDI--ENGRDFIDTAREVTKDTPIV 235 Query: 241 GFVAGKT-APPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPS 285 +G+T A H GA+ G+E A +++AG+ A S Sbjct: 236 AVKSGRTEAGASAAASHTGAI-----AGSERAYEAGLEQAGVLRATS 277 >gi|331661905|ref|ZP_08362828.1| protein FdrA [Escherichia coli TA143] gi|331060327|gb|EGI32291.1| protein FdrA [Escherichia coli TA143] Length = 305 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGIL---TPDSCKIGIMPGSIFRKGSVG 154 ++ ++ + + D +++K R ++GP+C + TP + +MP +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKTRARDKGLLVMGPDCGTSMIAATPLAFA-NVMP-----EGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ AD +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADAKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|262202170|ref|YP_003273378.1| CoA-binding domain-containing protein [Gordonia bronchialis DSM 43247] gi|262085517|gb|ACY21485.1| CoA-binding domain protein [Gordonia bronchialis DSM 43247] Length = 950 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 28/222 (12%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP------VLDMVRVKARLEKSSSRLI 125 + +V+ VP D + + + + +V ++ G + R+ ++ + RL+ Sbjct: 320 DLAVVAVPAERVPDVLDDCLVKAVRTLVVVSSGFADSGAQGLASEHRLVEQVREHGMRLV 379 Query: 126 GPNCPGILTPD---SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 GPN G+ D + + P I G VG +SG L + ++ +G ST V Sbjct: 380 GPNALGVANNDPTVALNATLAP-RIPAVGRVGFFCQSGALGIAILDTAARRQIGLSTFVS 438 Query: 183 IGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G V G D+L+ + D AT+ +++ E G+ +F + + R KPIV Sbjct: 439 AGNRADVSGN---DLLQYWDTDTATDVVLLYLESFGNPR----KFSRIARRVSRSKPIVA 491 Query: 242 FVAGKTA-PPGRTMGHAGAVISGGKGGAEDKINAM--KEAGI 280 +GK A P R G G +D+I M ++AG+ Sbjct: 492 VKSGKGALTPVRAA-------RSGAAGLDDQIARMVLEQAGV 526 >gi|18978210|ref|NP_579567.1| hypothetical protein PF1838 [Pyrococcus furiosus DSM 3638] gi|18894021|gb|AAL81962.1| hypothetical protein PF1838 [Pyrococcus furiosus DSM 3638] Length = 473 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 10/129 (7%) Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIF---RKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R+IGPNC G+ PD+ +P + G + +S+SG + + G+G Sbjct: 137 RVIGPNCVGVYVPDTGVDTVFLPEEKMDRPKSGPIAFVSQSGAFAAAMLDWAAMAGIGIG 196 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V G + D++E F DE + VM I G ++ +F++ + + KP Sbjct: 197 KMVSYGNKI--DVDDADLMEYFAQDEQIK--VMTFYIEGV--KDGRRFMEVAKRVTKIKP 250 Query: 239 IVGFVAGKT 247 I+ +G+T Sbjct: 251 IIALKSGRT 259 >gi|312195047|ref|YP_004015108.1| CoA-binding domain protein [Frankia sp. EuI1c] gi|311226383|gb|ADP79238.1| CoA-binding domain protein [Frankia sp. EuI1c] Length = 878 Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 15/172 (8%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP GI P + + G + G +G S+SG L + GLG S V Sbjct: 341 RVVGPASLGIQNPAAGLNASLTGQMPPPGRIGCYSQSGPLGTAMLTAAETRGLGMSVFVS 400 Query: 183 IGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G + G D+L+ + D ATE ++ E G+ +F + + GR+ P+V Sbjct: 401 AGDRADISGN---DMLQYWEDDPATEVALLHLETFGNPR----KFARLARRVGRRTPVVV 453 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 AG++ + AG + + D+++A + +A P GR + Sbjct: 454 VRAGRSELDSALLRQAGVI-------SVDRVSAGFDVAQLLASQPLPRGRRV 498 >gi|83589248|ref|YP_429257.1| CoA-binding [Moorella thermoacetica ATCC 39073] gi|83572162|gb|ABC18714.1| CoA-binding protein [Moorella thermoacetica ATCC 39073] Length = 707 Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 10/147 (6%) Query: 123 RLIGPNCPGIL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE--GLGQST 179 R+IGPNC G++ T + PG G++G ++SG + T+ + LG S Sbjct: 130 RVIGPNCNGVINTENRLSTSFAPGLQMIPGNIGFFTQSGATGGSILMLTAAQPKPLGFSK 189 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +G + +++LE + +D + + V+ G + G + + ++ K RKKP+ Sbjct: 190 WAHVGN--MCDVTNLEILEYYASDPSVK--VIAGYMEGV--RDGRELMRLAEKITRKKPL 243 Query: 240 VGFVAGKTAPPGR-TMGHAGAVISGGK 265 + G+T R T+ H G + K Sbjct: 244 LVLKVGRTEVGSRATLSHTGTLAGSDK 270 >gi|114320197|ref|YP_741880.1| GCN5-related N-acetyltransferase [Alkalilimnicola ehrlichii MLHE-1] gi|114226591|gb|ABI56390.1| GCN5-related N-acetyltransferase [Alkalilimnicola ehrlichii MLHE-1] Length = 887 Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 30/164 (18%) Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIFRKGS--VGILSRSGTLTYEAVFQTSQEGLGQST 179 RL+GP C + P + + P FR G+ +++ S + A+ EGLG S Sbjct: 126 RLLGPGCIDLTVPRTGVNASVAP---FRPGAGRAALVTESAAVATRALDWCQSEGLGLSH 182 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + +GG + DVL+ +D + +I++ E ++A +F+ + R KP+ Sbjct: 183 LIHLGG--AMDVDTGDVLDYLASDVHSRAILLYLEYI----DDARKFMSAARRAARVKPV 236 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN--AMKEAGIC 281 V P R G KG AED + A + AG+ Sbjct: 237 V------VLKPRR----------GSKGAAEDAVYEAAFRRAGLV 264 >gi|110634576|ref|YP_674784.1| GCN5-related N-acetyltransferase [Mesorhizobium sp. BNC1] gi|110285560|gb|ABG63619.1| GCN5-related N-acetyltransferase [Chelativorans sp. BNC1] Length = 893 Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust. Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R+IGPN G++ P + + G + +LS+SG + + + EG+G S V Sbjct: 124 RVIGPNTVGLIVPPAKLNASFAHMNPQAGGIALLSQSGAIATTLIDWAADEGIGFSHVVS 183 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + D L+L D T +I++ E + +F+ R KP++ Sbjct: 184 LGD--MADVDVGDYLDLLAGDARTRAILLYLE----SIPNPRKFMSAARAAARLKPVIAV 237 Query: 243 VAGK 246 G+ Sbjct: 238 KTGR 241 >gi|323529473|ref|YP_004231625.1| CoA-binding domain-containing protein [Burkholderia sp. CCGE1001] gi|323386475|gb|ADX58565.1| CoA-binding domain protein [Burkholderia sp. CCGE1001] Length = 731 Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 94/234 (40%), Gaps = 28/234 (11%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP----VLDMVRVKARLEKSSSRLIGP 127 + +V +P A+ E + IP V I G V + A + RL+GP Sbjct: 341 DVAVFAIPAKFVAGALTEVGKKRIPGAVLIPSGFAETGNVEGQQEIVAIAREYDIRLMGP 400 Query: 128 NCPGIL-TPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 N G TP + C P + +G + S+SG + + + +G S VG+G Sbjct: 401 NIYGFYYTPKNLCATFCTPYDV--QGKAALSSQSGGIGMAIIGFSRSAKMGVSAIVGLGN 458 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEI--GGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 + D+L F D+ T+ I E G A EAA A+ +KKP+V Sbjct: 459 K--SDIDEDDLLTFFEQDDNTDIIAQHCEDLKDGRAFAEAA------ARVSKKKPVVVLK 510 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 AG+T+ R ++G ED K+ G+ A RSL +LL Sbjct: 511 AGRTSLGARAASSHTGALAGNDRIYED---VFKQCGVIRA-------RSLRDLL 554 >gi|224477536|ref|YP_002635142.1| membrane protein FdrA [Staphylococcus carnosus subsp. carnosus TM300] gi|222422143|emb|CAL28957.1| putative acyl-CoA synthetase [Staphylococcus carnosus subsp. carnosus TM300] Length = 583 Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 16/120 (13%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPL-----IVCITEGIPVLDMVRVKARLEKSSSRLIG 126 N ++I +P A ++EAE L + ++ +P D VR+K ++G Sbjct: 116 NLALISIPGQYA------AMEAETALRNNLHVFMFSDNVPKDDEVRLKEMAHDKGLLVMG 169 Query: 127 PNC-PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 P+C GI+ + + +I KG +GI+ SGT E +EG G + A+G GG Sbjct: 170 PDCGTGII----HSLPLAFTNIVNKGDIGIVGASGTGIQEVTTIIDREGKGVTNAIGTGG 225 >gi|323698665|ref|ZP_08110577.1| CoA-binding domain protein [Desulfovibrio sp. ND132] gi|323458597|gb|EGB14462.1| CoA-binding domain protein [Desulfovibrio desulfuricans ND132] Length = 715 Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 16/176 (9%) Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSI--FRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K + R+ GPNC G T S K M SI G + ++ +SG + F LG Sbjct: 122 KGNMRVQGPNCMG--TYSSAKS--MNASIIDLAPGPMSLVLQSGNFGIDINFNAKSRNLG 177 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE-IGGSAEEEAAQFLKDEAKRGR 235 S IG F D +E DE T+ +++ E + +EE+ +FL+ K Sbjct: 178 YSCWATIGNQ--MDMRFHDFVEYIEEDENTKVLLLYMEGLRVESEEDGRKFLEAAKKTAA 235 Query: 236 KKPIVGF-VAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGICIAPSPARI 289 + PI + A H G++ G+E + A+++AGI SP + Sbjct: 236 RVPIAAIKIGRSAAGARAAASHTGSL-----AGSEKIFDAALRQAGIIRVDSPGEL 286 >gi|16761509|ref|NP_457126.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29140794|ref|NP_804136.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213425260|ref|ZP_03358010.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|289825482|ref|ZP_06544689.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25512315|pir||AD0831 probable acyl-CoA synthetase STY2844 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503810|emb|CAD05835.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi] gi|29136418|gb|AAO67985.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 886 Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPTSQHEELLASARHYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|298244195|ref|ZP_06968001.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp [Ktedonobacter racemifer DSM 44963] gi|297551676|gb|EFH85541.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp [Ktedonobacter racemifer DSM 44963] Length = 714 Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 14/153 (9%) Query: 124 LIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 L+GPN G + S G+ G VG++ +SG L + +G S V Sbjct: 134 LLGPNGNGFINVTSRVTPYGLPISPPLAAGPVGVVLQSGALASAVLAFAQAHAIGLSLLV 193 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G + + DV++ L DE+T SI + E +E + RG KPIV Sbjct: 194 SMGNESM--ISVTDVVDYLLEDESTRSIALFLE-SIRHPDELRRIAAKARARG--KPIVA 248 Query: 242 FVAGKTAPPGRT-MGHAGAVISGGKGGAEDKIN 273 G++ RT + H GA++ +DK+N Sbjct: 249 LKIGRSETSARTALSHTGAIV------GDDKVN 275 >gi|320539498|ref|ZP_08039167.1| putative truncated fused acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Serratia symbiotica str. Tucson] gi|320030623|gb|EFW12633.1| putative truncated fused acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Serratia symbiotica str. Tucson] Length = 767 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 8/126 (6%) Query: 123 RLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 RL+GPN G+L P S P I +KG + +S+S + + Q +G S + Sbjct: 2 RLLGPNSLGLLAPWQSVNASFSPLPI-QKGKLAFVSQSAAVANTVLDWAQQREIGFSYFI 60 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 + GD + ID L FLA A S +++ S +A +FL R KPI+ Sbjct: 61 AL-GDSLDIN--IDDLLDFLARNAKTSAILLYLENIS---DARRFLSAARSASRNKPILV 114 Query: 242 FVAGKT 247 +G++ Sbjct: 115 IKSGRS 120 >gi|300935718|ref|ZP_07150687.1| CoA binding domain protein [Escherichia coli MS 21-1] gi|300459107|gb|EFK22600.1| CoA binding domain protein [Escherichia coli MS 21-1] Length = 886 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPSSQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|57640879|ref|YP_183357.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus kodakarensis KOD1] gi|57159203|dbj|BAD85133.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus kodakarensis KOD1] Length = 474 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 10/129 (7%) Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIF---RKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R+IGPNC G+ PD+ +P + G + +S+SG + + G+G Sbjct: 135 RVIGPNCVGVYVPDTGVDTVFLPEEKMDRPKSGPIAFVSQSGAFAAAMLDWAAMAGIGIG 194 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V G + D++E F+ D+ + + E ++ +F++ K + KP Sbjct: 195 KMVSYGNK--LDVDDADLMEYFIHDDEIKVVTFYIE----GVKDGRKFMEAAKKITKVKP 248 Query: 239 IVGFVAGKT 247 ++ +G+T Sbjct: 249 VIALKSGRT 257 >gi|27378270|ref|NP_769799.1| hypothetical protein blr3159 [Bradyrhizobium japonicum USDA 110] gi|27351417|dbj|BAC48424.1| blr3159 [Bradyrhizobium japonicum USDA 110] Length = 790 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 30/235 (12%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGP 127 + +V +P A+ E E +IP V I G ++A + +K RL+GP Sbjct: 400 DTAVFAIPAKFVAAALTECGEKKIPGAVLIPSGFAEAGAPELQAEIVEVGKKYDIRLMGP 459 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 N G + + KG + S+SG + + + +G S VG+G Sbjct: 460 NIYGFYYTPANLCATFCTAYDVKGHAALSSQSGGIGMAIIGFSRSAKMGVSAIVGLGNK- 518 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEI--GGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 + D+L F D T I E G A EAA+ + +KKP+V AG Sbjct: 519 -SDIDEDDLLAFFEQDPNTNLIAQHCEDLKDGRAFAEAAK------RVSKKKPVVVLKAG 571 Query: 246 KTAPPGRTM-GHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARIGRSLVELL 297 +T+ + H GA+ DKI + + ++G+ A RSL +LL Sbjct: 572 RTSAGAKAASSHTGAL------AGNDKIYEDVLAQSGVIRA-------RSLRQLL 613 >gi|302344175|ref|YP_003808704.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075] gi|301640788|gb|ADK86110.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075] Length = 709 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 6/128 (4%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 K R +GPNC G++ + G + ++S+SGT + + Q G+ Sbjct: 123 NKHGLRFVGPNCMGVVNAHLPLNTAVSPLCAPPGGLSLVSQSGTYVTQTNYYLGQRGVRI 182 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V +G + + +D LE D T +I + E +E FL ++ R K Sbjct: 183 SKGVSVGNE--ASIDLVDCLEYLGDDPQTTAIGLYIECIRRPKE----FLAVASRISRDK 236 Query: 238 PIVGFVAG 245 PIV G Sbjct: 237 PIVAQYVG 244 >gi|147677842|ref|YP_001212057.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI] gi|146273939|dbj|BAF59688.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI] Length = 701 Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 14/145 (9%) Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPNC G++ + + KG + S+SG + + +S GLG S V + Sbjct: 127 LLGPNCVGLIDTHTPINATFAATFPYKGDIAFFSQSGAILLAILDWSSSTGLGFSKVVSL 186 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G ID +E D T I+ E + +FL+ + +KKPI+ Sbjct: 187 GNK--ASLSEIDFIEDAADDPYTRVILCYIE----DIVDGPRFLEVARRAAKKKPIIVLK 240 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGA 268 +G + AGA+ + GA Sbjct: 241 SG--------VSQAGALAASSHTGA 257 >gi|168823160|ref|ZP_02835160.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205340539|gb|EDZ27303.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320085528|emb|CBY95307.1| Uncharacterized protein yfiQ [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 886 Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPTSQHEELLASARHYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|320196420|gb|EFW71044.1| Protein acetyltransferase [Escherichia coli WV_060327] Length = 886 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPSSQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|309790917|ref|ZP_07685459.1| acetyl coenzyme A synthetase subunit alpha [Oscillochloris trichoides DG6] gi|308227031|gb|EFO80717.1| acetyl coenzyme A synthetase subunit alpha [Oscillochloris trichoides DG6] Length = 696 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 11/170 (6%) Query: 115 ARLEKSSSRLIGPNCPGIL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 A++++ R+IGPNC GI+ T S + F KG + ++S+SG + + + + Sbjct: 116 AKVQQYGMRMIGPNCLGIIDTVSSLNVSFAALMPF-KGEIALMSQSGAMCTAILDWSKAQ 174 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 GLG S V +G + +V L + S V++ + G + F+ + Sbjct: 175 GLGFSRFVSLGNK----ADVDEVALLHAWNHDPHSKVILAYLEGI--NDGPGFVNAAREV 228 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 + P++ +G TA R ++G + E A ++GI A Sbjct: 229 TKNTPVIAIKSGTTAAGTRAASSHTGSLAGSEAAYE---AAFHQSGILRA 275 >gi|329938559|ref|ZP_08287984.1| acyl-CoA synthetase [Streptomyces griseoaurantiacus M045] gi|329302532|gb|EGG46423.1| acyl-CoA synthetase [Streptomyces griseoaurantiacus M045] Length = 900 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 10/128 (7%) Query: 123 RLIGPNCPGILTPD-SCKI-GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R++GPNC GI D SC++ + R G+ G+ +SG + + S+ G+G ST Sbjct: 309 RMVGPNCLGIANTDPSCRVDATFAATHPRAGTAGVAVQSGGVGIALLEGLSRLGIGVSTF 368 Query: 181 VGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +G V G D+L+ + +D T+ ++ E G+ A F + + R+ P+ Sbjct: 369 ASLGDKYDVSGN---DMLQWWESDGRTDLALLHLESFGN----PAAFSRTARRVTRRLPV 421 Query: 240 VGFVAGKT 247 + AG+T Sbjct: 422 LTVDAGRT 429 >gi|325262451|ref|ZP_08129188.1| acetyl-CoA synthetase (ADP-forming), alpha and beta subunits [Clostridium sp. D5] gi|324032283|gb|EGB93561.1| acetyl-CoA synthetase (ADP-forming), alpha and beta subunits [Clostridium sp. D5] Length = 708 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 10/126 (7%) Query: 124 LIGPNCPGIL--TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 ++GPNC G + T + + RKG++G++S+SG L + E + Sbjct: 127 VMGPNCAGYVNYTDNVYAFAFISAERERKGNIGVISQSGQLCL-----SMMECPSMKFSY 181 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 I KG + D ++ + DE T+ + + E G + + L A +KKP++ Sbjct: 182 NISAGNAKGIQMEDYMDFLVEDEHTKVVSLYIE-GVKNPAKFVEVLNKAA--AKKKPVIV 238 Query: 242 FVAGKT 247 AG++ Sbjct: 239 LKAGRS 244 >gi|315616747|gb|EFU97364.1| bacterial FdrA family protein [Escherichia coli 3431] Length = 497 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 43/196 (21%), Positives = 92/196 (46%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ AK+ +N +VI V A ++++ ++ +++ ++ + V D + +K Sbjct: 83 YATIGSAKKHIPESNLAVISVNGLFAAREARQALQNDLNVML-FSDNVSVEDELALKQLA 141 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 142 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 198 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE I ++ + A A+ + + A+ Sbjct: 199 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPA---VARKVLERARA 255 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 256 CRKPVVVCFLDRGETP 271 >gi|170681301|ref|YP_001744773.1| CoA-binding domain/acetyltransferase domain-containing protein [Escherichia coli SMS-3-5] gi|170519019|gb|ACB17197.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli SMS-3-5] Length = 886 Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPSSQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|195927598|pdb|3DMY|A Chain A, Crystal Structure Of A Predicated Acyl-Coa Synthetase From E.Coli gi|195927599|pdb|3DMY|B Chain B, Crystal Structure Of A Predicated Acyl-Coa Synthetase From E.Coli Length = 480 Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 81/189 (42%), Gaps = 18/189 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + + ++ + + D +++K R + + GP+C Sbjct: 37 ANLALISVAGEYAAELANQALDRNLN-VXXFSDNVTLEDEIQLKTRAREKGLLVXGPDC- 94 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 95 -----GTSXIAGTPLAFANVXPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 149 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE ADE +E + V + EA + A + KP V Sbjct: 150 LSREVGGISALTALEXLSADEKSEVLAFVSK----PPAEAVRLKIVNAXKATGKPTVALF 205 Query: 244 AGKTAPPGR 252 G T R Sbjct: 206 LGYTPAVAR 214 >gi|325972420|ref|YP_004248611.1| hypothetical protein SpiBuddy_2606 [Spirochaeta sp. Buddy] gi|324027658|gb|ADY14417.1| protein of unknown function DUF1116 [Spirochaeta sp. Buddy] Length = 1039 Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 72/137 (52%), Gaps = 11/137 (8%) Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 VF ++ +A + + N ++I VP + A ++++ + +++ ++ + + D + +K+R Sbjct: 102 VFCSIEDAVQAQEETNLAIISVPGAYAAHEAKKALDLGLNVMI-FSDNVTLEDEIALKSR 160 Query: 117 LEKSSSRLIGPNC-PGIL--TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 ++ ++GP+C IL P C ++P GS+G+++ SGT E ++ Sbjct: 161 AQEKGLLVMGPDCGTAILGGKP-LCFANVVPS-----GSIGVVAASGTGLQEVTCLLTRM 214 Query: 174 GLGQSTAVGIGGDPVKG 190 G G S A+G GG +K Sbjct: 215 GCGISQAIGTGGRDLKN 231 >gi|315148965|gb|EFT92981.1| putative membrane protein FdrA [Enterococcus faecalis TX4244] Length = 519 Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust. Identities = 28/122 (22%), Positives = 60/122 (49%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ ++ + V + + +K + + ++ P+C I+ +G+ + R G +GI+ Sbjct: 140 VMLFSDNVTVDEELALKQKAHEKELFVMSPDCGTAIIN----GVGLCFANEVRSGDIGIV 195 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 SGT + E Q + G G S +G GG + G +D L+ + DE T++I+++ Sbjct: 196 GASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLI 255 Query: 213 GE 214 + Sbjct: 256 SK 257 >gi|220924506|ref|YP_002499808.1| CoA-binding domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219949113|gb|ACL59505.1| CoA-binding domain protein [Methylobacterium nodulans ORS 2060] Length = 907 Score = 39.3 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 9/141 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RL+GP C G+ P + + + KG + ++++S T+ G G S V Sbjct: 125 RLLGPECIGLAIPAARLNASLLAHMPPKGDLALIAKSRTVAAGIAEWAVGRGYGFSGVVS 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + D L+ F AD T +I++ E A ++A +F+ R KP+V Sbjct: 185 LG--LALDVDIADCLDHFAADRGTRAILLHLE----AVKDAPKFMSAARAAARAKPVVVL 238 Query: 243 VAGK---TAPPGRTMGHAGAV 260 +G+ GR + H+G + Sbjct: 239 RSGRHETCRADGRPVTHSGTL 259 >gi|325920186|ref|ZP_08182145.1| acyl-CoA synthetase (NDP forming) [Xanthomonas gardneri ATCC 19865] gi|325549326|gb|EGD20221.1| acyl-CoA synthetase (NDP forming) [Xanthomonas gardneri ATCC 19865] Length = 902 Score = 39.3 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 6/135 (4%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 R++A R++GP+C G++ P + + + G + ++S S + V Sbjct: 114 RMEASARAKGMRILGPHCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGV 173 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +G S V +G +F D+L+ F D T +I++ E G +A +F+ Sbjct: 174 ARSVGFSAVVSLGD--TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAAR 227 Query: 232 KRGRKKPIVGFVAGK 246 R KP+V +G+ Sbjct: 228 AAARAKPVVVVKSGR 242 >gi|167770179|ref|ZP_02442232.1| hypothetical protein ANACOL_01522 [Anaerotruncus colihominis DSM 17241] gi|167667501|gb|EDS11631.1| hypothetical protein ANACOL_01522 [Anaerotruncus colihominis DSM 17241] Length = 522 Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 11/181 (6%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPG 131 N +VI VP A + ++ +I +++ ++ + + + R+K ++GP+C Sbjct: 119 NMAVISVPGKYAAEVAQSCLDKDINVML-FSDNVTIDEEKRLKECAASKGLLMMGPDCGT 177 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK-- 189 + + + + ++ + G +GI+ SGT T E Q G G S +G GG +K Sbjct: 178 AIINN---VPLAFANVVKPGDIGIVGASGTGTQEVSSLIDQFGGGCSQVLGTGGRDLKLE 234 Query: 190 --GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 G L+ + D T+ I ++ + AEE A + LK A G K +V F+ G Sbjct: 235 IGGIMMTLGLDALINDPMTKVITLISK--PPAEEIADKILKQAAGAG-KPVVVCFIGGDP 291 Query: 248 A 248 A Sbjct: 292 A 292 >gi|221070100|ref|ZP_03546205.1| CoA-binding domain protein [Comamonas testosteroni KF-1] gi|220715123|gb|EED70491.1| CoA-binding domain protein [Comamonas testosteroni KF-1] Length = 701 Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 13/130 (10%) Query: 123 RLIGPNCPGIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RL+GPNC G + T C G M KG + I+S+SG + Q G+G + Sbjct: 125 RLLGPNCLGFINFTTGGVCWTGSMRTPPL-KGGISIVSQSGAVATVMKHFAHQHGIGLNV 183 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK--K 237 G + V G +V++ + D AT I + E L+ A+R + K Sbjct: 184 VAATGNEAVLG--LAEVIDYLVDDPATRVITVFAET-----VRDTGLLRSAAERALRQGK 236 Query: 238 PIVGFVAGKT 247 PIV G++ Sbjct: 237 PIVVLKVGRS 246 >gi|325917233|ref|ZP_08179457.1| acyl-CoA synthetase (NDP forming) [Xanthomonas vesicatoria ATCC 35937] gi|325536528|gb|EGD08300.1| acyl-CoA synthetase (NDP forming) [Xanthomonas vesicatoria ATCC 35937] Length = 902 Score = 39.3 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 6/135 (4%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 R++A R++GP+C G++ P + + + G + ++S S + V Sbjct: 114 RMEASARAKGMRILGPHCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGV 173 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +G S V +G +F D+L+ F D T +I++ E G +A +F+ Sbjct: 174 ARSVGFSAVVSLGD--TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAAR 227 Query: 232 KRGRKKPIVGFVAGK 246 R KP+V +G+ Sbjct: 228 AAARAKPVVVVKSGR 242 >gi|218547889|ref|YP_002381680.1| acyl-CoA synthetase NAD(P)-binding subunit/ATP-binding subunit [Escherichia fergusonii ATCC 35469] gi|218355430|emb|CAQ88038.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia fergusonii ATCC 35469] Length = 886 Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + +G + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIALG-----ESLDIDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|157382704|gb|ABV48790.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA6] Length = 335 Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 8/97 (8%) Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPP- 250 F+D + F + + +V++GE+GG E A+ +KD GR KP++ + G + Sbjct: 1 FLDHMLRFEKNPQVKMMVLLGEVGGELEYRVAEAIKD----GRITKPVIAWCIGTISKHF 56 Query: 251 --GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 GHAGA + A+ K A++EAG + S Sbjct: 57 GGEVQFGHAGAKAGAERETADAKNEALREAGAYVPKS 93 >gi|188584496|ref|YP_001927941.1| GCN5-related N-acetyltransferase [Methylobacterium populi BJ001] gi|179347994|gb|ACB83406.1| GCN5-related N-acetyltransferase [Methylobacterium populi BJ001] Length = 900 Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 9/144 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGP+ G+ P + + G + ++S+SGT+ + G+G S + Sbjct: 125 RLIGPDSIGLSVPARGLNATLLARPPKPGDLALISQSGTVASAIAEWGWRHGVGFSAVMT 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVM-VGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G + D L+ F D T +I++ + + +A +FL R KP+V Sbjct: 185 LGRS--ADVDIADCLDHFAEDYHTRAIILSLHHVA-----DARKFLTAARAAARAKPVVV 237 Query: 242 FVAGKTAPPGRT-MGHAGAVISGG 264 G+ PGR H GA+ G Sbjct: 238 LRTGRHEAPGRRPETHTGALARPG 261 >gi|330824437|ref|YP_004387740.1| CoA-binding domain-containing protein [Alicycliphilus denitrificans K601] gi|329309809|gb|AEB84224.1| CoA-binding domain protein [Alicycliphilus denitrificans K601] Length = 705 Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 18/103 (17%) Query: 118 EKSSSRLIGPNCP----------GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ R++GPNC G TP + G++PG I ++S+SG + Sbjct: 126 RRTGMRVVGPNCMGSINVRRGLLGTFTPSAAGFGLVPGRI------SLVSQSGAFGGYCL 179 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 Q G+G + V G +F D + + DE T+ IV Sbjct: 180 SLIRQRGIGLNLWVTTGNQ--SDVDFADCVRFYADDEETDVIV 220 >gi|16128305|ref|NP_414854.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli str. K-12 substr. MG1655] gi|89107193|ref|AP_000973.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli str. K-12 substr. W3110] gi|170021298|ref|YP_001726252.1| FdrA family protein [Escherichia coli ATCC 8739] gi|170079943|ref|YP_001729263.1| acyl-CoA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|256024055|ref|ZP_05437920.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia sp. 4_1_40B] gi|300916506|ref|ZP_07133239.1| bacterial FdrA protein [Escherichia coli MS 115-1] gi|300946449|ref|ZP_07160724.1| bacterial FdrA protein [Escherichia coli MS 116-1] gi|300955472|ref|ZP_07167840.1| bacterial FdrA protein [Escherichia coli MS 175-1] gi|301017802|ref|ZP_07182451.1| bacterial FdrA protein [Escherichia coli MS 196-1] gi|301645426|ref|ZP_07245366.1| bacterial FdrA protein [Escherichia coli MS 146-1] gi|307136968|ref|ZP_07496324.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli H736] gi|331640837|ref|ZP_08341972.1| putative oxidoreductase subunit [Escherichia coli H736] gi|2495512|sp|P77187|YAHF_ECOLI RecName: Full=Uncharacterized protein yahF gi|1657518|gb|AAB18046.1| FdrA-like protein [Escherichia coli str. K-12 substr. MG1655] gi|1786513|gb|AAC73423.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli str. K-12 substr. MG1655] gi|85674463|dbj|BAE76103.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli str. K12 substr. W3110] gi|169756226|gb|ACA78925.1| FdrA family protein [Escherichia coli ATCC 8739] gi|169887778|gb|ACB01485.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli str. K-12 substr. DH10B] gi|260450488|gb|ACX40910.1| FdrA family protein [Escherichia coli DH1] gi|299882658|gb|EFI90869.1| bacterial FdrA protein [Escherichia coli MS 196-1] gi|300317611|gb|EFJ67395.1| bacterial FdrA protein [Escherichia coli MS 175-1] gi|300416180|gb|EFJ99490.1| bacterial FdrA protein [Escherichia coli MS 115-1] gi|300453910|gb|EFK17530.1| bacterial FdrA protein [Escherichia coli MS 116-1] gi|301076295|gb|EFK91101.1| bacterial FdrA protein [Escherichia coli MS 146-1] gi|309700585|emb|CBI99881.1| conserved hypothetical protein [Escherichia coli ETEC H10407] gi|315135006|dbj|BAJ42165.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli DH1] gi|323938726|gb|EGB34974.1| bacterial FdrA protein [Escherichia coli E1520] gi|323943400|gb|EGB39553.1| FdrA protein [Escherichia coli E482] gi|331037635|gb|EGI09855.1| putative oxidoreductase subunit [Escherichia coli H736] gi|332341682|gb|AEE55016.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 515 Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust. Identities = 43/196 (21%), Positives = 91/196 (46%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIGSAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE I ++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLDRGETP 289 >gi|167584904|ref|ZP_02377292.1| GCN5-related N-acetyltransferase [Burkholderia ubonensis Bu] Length = 644 Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 6/106 (5%) Query: 144 PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLAD 203 P R G V +S+S LT + GLG S V +GG+ + DVL+ +D Sbjct: 4 PAYTVRSGGVAWVSQSNALTNAVLGWADARGLGFSHVVALGGE--ADVDAGDVLDYLASD 61 Query: 204 EATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP 249 T +I++ E+ + A +F+ R KP++ G+ P Sbjct: 62 PGTRAILL--EL--DSVRAARKFMSAARAAARNKPVLALRTGRADP 103 >gi|289664731|ref|ZP_06486312.1| putative acetyltransferase (GNAT) family protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 902 Score = 39.3 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 6/135 (4%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 R++A R++GP+C G++ P + + + G + ++S S + V Sbjct: 114 RMEASARAKGMRILGPHCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGV 173 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +G S V +G +F D+L+ F D T +I++ E G +A +F+ Sbjct: 174 ARSVGFSAVVSLGD--TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAAR 227 Query: 232 KRGRKKPIVGFVAGK 246 R KP+V +G+ Sbjct: 228 AAARAKPVVVVKSGR 242 >gi|325968247|ref|YP_004244439.1| CoA-binding protein [Vulcanisaeta moutnovskia 768-28] gi|323707450|gb|ADY00937.1| CoA-binding domain protein [Vulcanisaeta moutnovskia 768-28] Length = 484 Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 10/151 (6%) Query: 116 RLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIF---RKGSVGILSRSGTLTYEAVFQTS 171 R+ ++ R++GPNC G+ + +P + G V ++S+SG + + + Sbjct: 137 RVVQNRIRVLGPNCIGVYNAFNGLDTFFLPEDRMGRPKPGPVALISQSGAVAGAILDWAA 196 Query: 172 QEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + +G AV G + +E +LE F D + IVM E G E + L+ Sbjct: 197 RRNIGVGLAVNYGNKLDINESE---LLEYFAKDNRVKVIVMYME-GLKYIGEGKKLLEVM 252 Query: 231 AKRGRKKPIVGFVAGKT-APPGRTMGHAGAV 260 + KPIV + AG+T A G H A+ Sbjct: 253 KEVSSVKPIVTYKAGRTKAATGAVKSHTAAL 283 >gi|315425442|dbj|BAJ47106.1| acetyl-CoA synthetase (ADP-forming), alpha and beta subunit [Candidatus Caldiarchaeum subterraneum] Length = 703 Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 65/156 (41%), Gaps = 21/156 (13%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDS------------CKIGIMPGSIF--RKGSVGILS 157 R++ + ++ RL+GPN GI+ P + G +I RKG+V I+S Sbjct: 115 RLRQVVVETGIRLLGPNTIGIIDPYTGVDTSFTRETKPFADGTWGRAIIYPRKGNVAIIS 174 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIG 216 +SG L Y ++ G+G A +G V T D F D T IV+ E Sbjct: 175 QSGALAYHSIDLFGDRGVGLRAAACVGNQVDVNITMLAD---YFSDDPLTRVIVLYVEGV 231 Query: 217 GSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 LK R R K +V AG+TA GR Sbjct: 232 ADGRGLLNAVLK---ARHRGKQVVVLKAGRTAVGGR 264 >gi|84497992|ref|ZP_00996789.1| hypothetical protein JNB_17933 [Janibacter sp. HTCC2649] gi|84381492|gb|EAP97375.1| hypothetical protein JNB_17933 [Janibacter sp. HTCC2649] Length = 494 Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 8/167 (4%) Query: 50 TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 +GG + P T + A A ++I VP A +++I A +++ ++ +PV D Sbjct: 94 SGGFGDAPAPRTTSGAVRVGGAELALISVPGRYATTEALDAITAGASVML-FSDNVPVED 152 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 VR+K + ++GP+C G +G ++ G +G+++ SGT + + Sbjct: 153 EVRLKDAAAAADVLVMGPDC-GTAVVGGVALGF--ANVVGAGPIGMVAASGTGAQQVMCL 209 Query: 170 TSQEGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 G+G S +G+GG +K G L AD AT SIV+V Sbjct: 210 LDAAGVGISHCLGVGGRDLKTAVGGRSTRQALAALAADPATTSIVVV 256 >gi|78358248|ref|YP_389697.1| acetyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220653|gb|ABB40002.1| acetyltransferase, GNAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 911 Score = 39.3 bits (90), Expect = 0.80, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 14/129 (10%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRK---GSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R++GPNC G + P +G+ R+ G + +S+S +L + + +G+G S Sbjct: 129 RILGPNCLGFINP---SVGVNASLAHREALPGRIAFVSQSDSLFTSVLDWATSKGVGFSH 185 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE-IGGSAEEEAAQFLKDEAKRGRKKP 238 + +G F D+L+ D T ++++ E I G A +F+ R KP Sbjct: 186 FISLGDR--YDINFADILDYLNNDPGTRAVLLYLETISG-----ARRFMSAARALARNKP 238 Query: 239 IVGFVAGKT 247 ++ +GK+ Sbjct: 239 VLVMKSGKS 247 >gi|225388424|ref|ZP_03758148.1| hypothetical protein CLOSTASPAR_02160 [Clostridium asparagiforme DSM 15981] gi|225045505|gb|EEG55751.1| hypothetical protein CLOSTASPAR_02160 [Clostridium asparagiforme DSM 15981] Length = 515 Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust. Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 22/204 (10%) Query: 59 FTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPL-----IVCITEGIPVLDMVR 112 + T+ A K+ AAN +VI VP A + EA+I L ++ ++ + + + Sbjct: 103 YKTIRHAVKDNRAANVAVISVPGRYA------AREAKIALNSGLHVMMFSDNVSIEEERA 156 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 +K ++GP+C + + G+ + R+G++G++ SGT E + Q + Sbjct: 157 LKELAVSKGLLMMGPDCGTAVINHT---GLCFANQVRRGNIGVVGASGTGLQEVIVQIDR 213 Query: 173 EGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 G G + A+G GG + G + + + TE IV+V + E+ A + Sbjct: 214 LGGGITQALGTGGRDLSREIGGLMMLHGIRALAKEPDTEIIVLVSK---PPEQSVADKIF 270 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGR 252 + K +V F+ G TA R Sbjct: 271 ELLNTLEKPVVVCFLEGDTARECR 294 >gi|84496205|ref|ZP_00995059.1| hypothetical protein JNB_01760 [Janibacter sp. HTCC2649] gi|84382973|gb|EAP98854.1| hypothetical protein JNB_01760 [Janibacter sp. HTCC2649] Length = 892 Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 17/145 (11%) Query: 116 RLEKSSSRLIGPNCPGILTPD---SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 R S R++GPN G++ D S + P + KG +G+ ++SG L + ++ Sbjct: 317 RARGSGMRIVGPNSFGLINTDPALSLNASLSP-DMPPKGHLGLFAQSGALGIAVLASAAR 375 Query: 173 EGLGQSTAVGIGGD--PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 LG S+ G G+ V G +F ++ ++ D+ T ++ + E G+ +F + Sbjct: 376 RNLGISS-FGSAGNRVDVSGNDF---MQYWIDDDDTHAVGLYLESMGNPR----KFSRIA 427 Query: 231 AKRGRKKPIVGFVAGKT---APPGR 252 GR KP++ +G + APPG Sbjct: 428 RNLGRIKPVIVVQSGVSAYGAPPGH 452 >gi|317487436|ref|ZP_07946223.1| CoA binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316921295|gb|EFV42594.1| CoA binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 716 Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust. Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 15/130 (11%) Query: 119 KSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 K + R++GPNC G+ + ++ I + PG + ++ +SG + F + G Sbjct: 122 KGNMRIMGPNCMGMYSSAVSLNASIIDLAPGPM------SLVLQSGNFGIDLNFNAKKRG 175 Query: 175 LGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGE-IGGSAEEEAAQFLKDEAK 232 +G S IG V+ +F+ +E D+ T+ +++ E + EE+ +FL+ + Sbjct: 176 MGYSCWATIGNQMDVRFNDFVRYIE---QDDHTKVMLLYMEGLRVENEEDGRKFLEAARR 232 Query: 233 RGRKKPIVGF 242 KPI Sbjct: 233 TSVSKPIAAI 242 >gi|323965075|gb|EGB60535.1| FdrA protein [Escherichia coli M863] gi|327254866|gb|EGE66482.1| protein fdrA [Escherichia coli STEC_7v] Length = 555 Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust. Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 18/182 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTHAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG-- 185 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 186 --DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ DE +E + V + EA + A + KP V Sbjct: 231 LSRDVGGISALTALEMLSVDEKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AG 245 G Sbjct: 287 LG 288 >gi|331651237|ref|ZP_08352262.1| putative oxidoreductase subunit [Escherichia coli M718] gi|331050978|gb|EGI23030.1| putative oxidoreductase subunit [Escherichia coli M718] Length = 515 Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust. Identities = 43/196 (21%), Positives = 91/196 (46%), Gaps = 12/196 (6%) Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ +G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVHRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + + G +D + + D TE I ++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAP 249 RK +V F+ P Sbjct: 274 CRKPVVVCFLGRGETP 289 >gi|320449194|ref|YP_004201290.1| 6-carboxyhexanoate-CoA ligase [Thermus scotoductus SA-01] gi|320149363|gb|ADW20741.1| 6-carboxyhexanoate-CoA ligase [Thermus scotoductus SA-01] Length = 765 Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust. Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 17/208 (8%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPG 131 + +VI VP +A+ S + V +T G + + + + RL+GP G Sbjct: 268 DLAVIAVPKERVWEALEASGRRGVRASVVLTTGFQDQEARELADKARRLGMRLLGPGSLG 327 Query: 132 IL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 ++ T ++ + + G + I S+SGTL + GLG S+ V +G Sbjct: 328 LVHTHPEVRLAAGLAPLPKPGPLAISSQSGTLGRAVMAYAEGMGLGISSFVSLGAKADIS 387 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 + D+L+ + DE T I++ E G+ +F + + G+KKPI+ V P Sbjct: 388 SN--DLLQFWEEDERTRVILLYLESFGNPR----RFSRLARRIGKKKPILA-VHPSRDPL 440 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEA 278 RT+ VI + N+++EA Sbjct: 441 VRTLFAQAGVI---------RANSLEEA 459 >gi|284175390|ref|ZP_06389359.1| hypothetical protein Ssol98_12180 [Sulfolobus solfataricus 98/2] gi|261603105|gb|ACX92708.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus solfataricus 98/2] Length = 660 Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 13/141 (9%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPN GI+TP+ + ++G+VG++ +SG L + + +G S V Sbjct: 123 RVLGPNTFGIITPEFN--ATFTYTDVKRGNVGLVVQSGGLGVYMLNWAQKYRIGISYMVS 180 Query: 183 IGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G VK E I+ L D T +I + E G ++ A FL++ + R+KP+V Sbjct: 181 LGNQADVKEYEVINYLS---KDAETRAIFVYLE--GVSDGNA--FLEELPEATRRKPVV- 232 Query: 242 FVAGKTAPPGRTMG--HAGAV 260 F+ G + G + H G++ Sbjct: 233 FLKGGVSSSGASAAKTHTGSL 253 >gi|117618048|ref|YP_854682.1| acyl-CoA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559455|gb|ABK36403.1| acyl-CoA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 858 Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust. Identities = 47/203 (23%), Positives = 74/203 (36%), Gaps = 41/203 (20%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RL+GPN G+L P + G V LS+S ++ + Q LG S + Sbjct: 122 RLLGPNSMGMLLPGQGINASFSPIAAKPGQVAFLSQSAAVSTTILDWAKQHELGFSAFIS 181 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G F +L+ D T +I++ + ++A FL R KPI+ Sbjct: 182 LGDH--CDINFGQLLDQLSRDSVTRAILLYMD----KLQDARHFLSAARAASRNKPILVL 235 Query: 243 VAGKTAPPG----------------------------RTMGHA-------GAVISGGKGG 267 +G+ P T+ H+ A+IS G+G Sbjct: 236 KSGRHEPDNGLDNVYDAAIRRAGMLRVRDTHELFAAVETLSHSLTLKGERLAIISNGRGL 295 Query: 268 AEDKINAMKEAGICIAPSPARIG 290 A I+ + E G +A P IG Sbjct: 296 ANMAIDKLLERGGKLAMPPRDIG 318 >gi|227554435|ref|ZP_03984482.1| FdrA family protein [Enterococcus faecalis HH22] gi|227176420|gb|EEI57392.1| FdrA family protein [Enterococcus faecalis HH22] Length = 370 Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 7/104 (6%) Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 +K + + ++GP+C + +G+ + R G +GI+ SGT + E Q + Sbjct: 6 LKQKAHEKELFVMGPDCGTAIIN---GVGLCFANEVRSGDIGIVGASGTGSQEVSVQIHK 62 Query: 173 EGLGQSTAVGIGGDPVK----GTEFIDVLELFLADEATESIVMV 212 G G S +G GG + G +D L+ + DE T++I+++ Sbjct: 63 YGYGISQLIGTGGRDLSAEIGGLMMLDGLDTLMVDEQTKAILLI 106 >gi|301059526|ref|ZP_07200439.1| putative acetyl coenzyme A synthetase (ADP forming), alpha domain protein [delta proteobacterium NaphS2] gi|300446421|gb|EFK10273.1| putative acetyl coenzyme A synthetase (ADP forming), alpha domain protein [delta proteobacterium NaphS2] Length = 895 Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 14/134 (10%) Query: 111 VRVKARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 +R+ K R+IGPNC GI++ ++ IMP G + +S+SG + Sbjct: 116 LRILKEAAKGGLRIIGPNCMGIVSSGVRLNASFASIMP----LPGKMAFISQSGAICGAI 171 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + QEG+G S V IG + +F D++ D +SIV+ E + +F Sbjct: 172 LDLSIQEGIGFSHFVSIGS--MLDVDFGDLINYLGDDSDVKSIVLYIE----SLTNVRKF 225 Query: 227 LKDEAKRGRKKPIV 240 + R KPIV Sbjct: 226 MGAARAISRVKPIV 239 >gi|331672051|ref|ZP_08372847.1| protein FdrA [Escherichia coli TA280] gi|331071040|gb|EGI42399.1| protein FdrA [Escherichia coli TA280] Length = 555 Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGIL---TPDSCKIGIMPGSIFRKGSVG 154 ++ ++ + + D +++K R + ++GP+C + TP + +MP +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFA-NVMP-----EGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G G + A+G+GG V G + LE+ D +E + Sbjct: 198 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSTDAKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|193064096|ref|ZP_03045181.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli E22] gi|192929331|gb|EDV82940.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli E22] Length = 886 Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLEQ 210 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 211 LC----DARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|157382706|gb|ABV48791.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA17] Length = 335 Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 8/97 (8%) Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPP- 250 F+D + F + + +V++GE+GG E A+ +KD GR KP++ + G + Sbjct: 1 FLDHMLRFEKNPQVKLMVLLGEVGGELEYRVAEAIKD----GRITKPVIAWCIGTISKHF 56 Query: 251 --GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 GHAGA + A+ K A++EAG + S Sbjct: 57 GGEVQFGHAGAKAGAERETADAKNEALREAGAYVPKS 93 >gi|76802071|ref|YP_327079.1| acetate--CoA ligase [Natronomonas pharaonis DSM 2160] gi|76557936|emb|CAI49520.1| acyl-CoA synthetase III (probable acetate--CoA ligase (ADP-forming)) [Natronomonas pharaonis DSM 2160] Length = 697 Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 11/146 (7%) Query: 118 EKSSSRLIGPNCPGIL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ ++GPNC GIL TP P + R G++ +S+SG L + + G+G Sbjct: 118 DRHGINVVGPNCLGILSTPTGLNATFSPRNA-RPGNISFMSQSGALVTAVLDWAADRGIG 176 Query: 177 QSTAVGIGGDPV-KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 + V +G V T+F+D E ++ V++G + + A F+ A Sbjct: 177 FNDVVSLGNKAVLDETDFVDTWG-----EDDDTDVVLGYLEDI--QNGASFVDAAATATE 229 Query: 236 KKPIVGFVAGKTAPPGRTM-GHAGAV 260 P+ +G+T + H GAV Sbjct: 230 STPVAVLKSGRTDAGAQAASSHTGAV 255 >gi|85858899|ref|YP_461101.1| acetyl-CoA synthetase subunit beta [Syntrophus aciditrophicus SB] gi|85721990|gb|ABC76933.1| acetyl-CoA synthetase beta subunit [Syntrophus aciditrophicus SB] Length = 697 Score = 38.9 bits (89), Expect = 0.93, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 27/201 (13%) Query: 86 AIIESIEAEIPLIVCITEGIPVLD-----MVRVKARLEKSSS-RLIGPNCPGILT----- 134 A E I++ + ++ +++G D + RL + S R++GPN GIL Sbjct: 80 AFKECIQSGVKRVMIVSQGFADADPHGEKLQNEIVRLARESGIRVVGPNTLGILNNFRNF 139 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 S I P I V +++++G + A + G++ +G D +F+ Sbjct: 140 STSFVDLIKPKKI---PPVSLIAQTGMIQV-ASHNLAYHDWGKALDIGNACD----VDFV 191 Query: 195 DVLELFLADEATESIV--MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 D LE F AD T IV M G I G +FLK ++ KPI+ F G+T + Sbjct: 192 DALEYFGADPETRVIVVHMEGIIRGR------EFLKAASRISPDKPIIIFKTGRTTAGAK 245 Query: 253 TMGHAGAVISGGKGGAEDKIN 273 A ++G AE N Sbjct: 246 AALSHTASLTGEDEIAEAAFN 266 >gi|15898607|ref|NP_343212.1| hypothetical protein SSO1806 [Sulfolobus solfataricus P2] gi|13815058|gb|AAK42002.1| Conserved hypothetical protein [Sulfolobus solfataricus P2] Length = 660 Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 13/141 (9%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPN GI+TP+ + ++G+VG++ +SG L + + +G S V Sbjct: 123 RVLGPNTFGIITPEFN--ATFTYTDVKRGNVGLVVQSGGLGVYMLNWAQKYRIGISYMVS 180 Query: 183 IGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G VK E I+ L D T +I + E G ++ A FL++ + R+KP+V Sbjct: 181 LGNQADVKEYEVINYLS---KDAETRAIFVYLE--GVSDGNA--FLEELPEATRRKPVV- 232 Query: 242 FVAGKTAPPGRTMG--HAGAV 260 F+ G + G + H G++ Sbjct: 233 FLKGGVSSSGASAAKTHTGSL 253 >gi|161502246|ref|YP_001569358.1| hypothetical protein SARI_00274 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863593|gb|ABX20216.1| hypothetical protein SARI_00274 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 886 Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSR 158 CI P + A + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPTSQHEELLACARRHKMRLLGPNSLGLLAPWLGLNASFSPVPI-KQGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|283832024|ref|ZP_06351765.1| acetyltransferase, GNAT family [Citrobacter youngae ATCC 29220] gi|291071641|gb|EFE09750.1| acetyltransferase, GNAT family [Citrobacter youngae ATCC 29220] Length = 886 Score = 38.9 bits (89), Expect = 0.97, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A + RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPAAQHADLLACASRYKIRLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 210 ---HLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLR-----TSAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|119871805|ref|YP_929812.1| CoA-binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119673213|gb|ABL87469.1| CoA-binding domain protein [Pyrobaculum islandicum DSM 4184] Length = 461 Score = 38.9 bits (89), Expect = 0.97, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 80/203 (39%), Gaps = 41/203 (20%) Query: 118 EKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 K R++GPNC G+ D+ + I + R G + LS+SG + + + E Sbjct: 130 RKYGVRILGPNCIGVYNAFNGLDTMFLPIEKAARPRPGPIAFLSQSGAVMTAVLDWAAGE 189 Query: 174 GLGQSTAVGIG-------GDPVK---GTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 +G AV G D ++ G E I V+ ++L G +A Sbjct: 190 EIGVGIAVNFGNRSDITEADLIQYLGGVEEIKVVAIYLE-------------GFRWRGDA 236 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISG------------GKGGAEDK 271 +F+K A + KKP+V + AG++ R A ++G G AED Sbjct: 237 MRFIK--AVKSLKKPVVVYKAGRSDDSKRAAVSHTAAMAGDYKMYRALFKQAGVIEAEDL 294 Query: 272 INAMKEAGICIAPSPARIGRSLV 294 + A P RI ++LV Sbjct: 295 VELFDIAKALALYKPTRIEKALV 317 >gi|289706922|ref|ZP_06503259.1| CoA binding domain protein [Micrococcus luteus SK58] gi|289556357|gb|EFD49711.1| CoA binding domain protein [Micrococcus luteus SK58] Length = 892 Score = 38.9 bits (89), Expect = 0.98, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 31/205 (15%) Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI-VCITEGIPVLDMVR 112 V VP A E AA A + V SG DA E +EA+ L+ + G+ Sbjct: 250 VAVPADEVEALIPEAAAAGAQGLVVLTSGYADAGAEGLEAQRRLVSLARAHGM------- 302 Query: 113 VKARLEKSSSRLIGPNCPGILTPD-SCKIGIMPGS-IFRKGSVGILSRSGTLTYEAVFQT 170 R+IGP G++ D + ++ P + ++G V + S+SG + Sbjct: 303 ----------RVIGPASTGLVRTDPAIRLNASPSPGLAQRGPVSLFSQSGAVGAMVSAGV 352 Query: 171 SQEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + G+G ST++ G V G D ++ F AD T ++ + E G+ +F + Sbjct: 353 KRRGVGISTSISAGNRADVSGN---DAMQFFEADPHTAAVGVYLESFGNPR----KFSRI 405 Query: 230 EAKRGRKKPIV---GFVAGKTAPPG 251 + R KP+V V G+ PPG Sbjct: 406 ARRLSRTKPVVVVRSDVTGRFLPPG 430 >gi|290973168|ref|XP_002669321.1| GCN5-related N-acetyltransferase [Naegleria gruberi] gi|284082867|gb|EFC36577.1| GCN5-related N-acetyltransferase [Naegleria gruberi] Length = 1100 Score = 38.9 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 19/146 (13%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIG-------------IMP---GSIFRKGSVGI 155 + K ++ S R+IGP G++TP + G I P S +G +G+ Sbjct: 248 KFKEIVKGSDIRVIGPGM-GLITPLVTQSGQYHVGEIYNNFLNITPTNRSSELTRGKIGV 306 Query: 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEI 215 +S+SG L + + ++G+G S +G + F D++E F D T +I++ E Sbjct: 307 VSQSGALATTILDWSLKQGVGLSGFACVGANQTD-VNFADMVEHFGNDPNTHAILLYIED 365 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVG 241 G+ E +F KKPI+ Sbjct: 366 LGN-NEHIKRFASAARSVALKKPIIA 390 >gi|218780519|ref|YP_002431837.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218761903|gb|ACL04369.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 729 Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 11/145 (7%) Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRK--GSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 ++GPN G+ P + G+ R G+ +S+SG + + + ++G+G Sbjct: 366 ILGPNTMGLNNPHNTFY--CTGTHIRPEPGATAFVSQSGNMGGQLMGFALEQGIGLRAFC 423 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G G + + E D +E F DE T ++V+ E + + +F + + G+ KP++ Sbjct: 424 GSGNEAMISIE--DSMEAFEVDELTRTVVLYLE----SVKNGRRFYESARRLGKMKPVIV 477 Query: 242 FVAGKTAPPGRTMG-HAGAVISGGK 265 G+T G+ H GA+ S K Sbjct: 478 LKGGRTEAGGKAAASHTGAMASNVK 502 >gi|78049719|ref|YP_365894.1| putative acetyltransferase (GNAT) family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038149|emb|CAJ25894.1| putative acetyltransferase (GNAT) family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 902 Score = 38.9 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 10/136 (7%) Query: 115 ARLEKSSS----RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 AR+E ++ R++GP+C G++ P + + + G + ++S S + V Sbjct: 113 ARMESAARAKGMRILGPHCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWG 172 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 +G S V +G +F D+L+ F D T +I++ E G +A +F+ Sbjct: 173 VARSVGFSAVVSLGD--TLDVDFSDLLDYFATDYRTRAILLYVERIG----DARKFMSAA 226 Query: 231 AKRGRKKPIVGFVAGK 246 R KP+V +G+ Sbjct: 227 RAAARAKPVVVVKSGR 242 >gi|307298663|ref|ZP_07578466.1| FdrA family protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306915828|gb|EFN46212.1| FdrA family protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 510 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 35/148 (23%), Positives = 74/148 (50%), Gaps = 8/148 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I +P A +++++ + +++ ++ + D +++K +++ ++GP+C Sbjct: 114 ANLALISLPGRFAAAEAMKALKNGLNVML-YSDNVATEDEIKLKHYADRNDLIVMGPDC- 171 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK- 189 G + +G ++ +G VGI++ SGT E + Q S+ G+G +G GG VK Sbjct: 172 GTAVINGKGLGF--SNVCPEGPVGIVAASGTGLQEVMVQLSRRGIGVKHGIGTGGRDVKE 229 Query: 190 ---GTEFIDVLELFLADEATESIVMVGE 214 G F+ + D I+ VG+ Sbjct: 230 CVGGISFLKGIRELSDDPEISLIIAVGK 257 >gi|157382702|gb|ABV48789.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA1] Length = 336 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 8/98 (8%) Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPP 250 +F+D + + + + +V++GE+GG E A+ +KD GR KP++ + G + Sbjct: 1 DFLDHMLRYEKNPQVKMMVLLGEVGGELEYRVAEAIKD----GRITKPVIAWCIGTISKH 56 Query: 251 ---GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 GHAGA + A+ K A++EAG + S Sbjct: 57 FGGEVQFGHAGAKAGAERETADAKNEALREAGAYVPKS 94 >gi|283786199|ref|YP_003366064.1| acyl-CoA synthetase [Citrobacter rodentium ICC168] gi|282949653|emb|CBG89272.1| putative acyl-CoA synthetase [Citrobacter rodentium ICC168] Length = 886 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 21/163 (12%) Query: 123 RLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 RL+GPN G+L P P I ++G + +S+S ++ + Q +G S + Sbjct: 120 RLLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQSAAVSNTILDWAQQREMGFSYFI 178 Query: 182 GIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + GD + IDV EL +LA D T +I++ E +A +F+ R KP Sbjct: 179 AL-GDSLD----IDVDELLDYLARDSKTSAILLYLE----HLSDARRFVSAARSASRNKP 229 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 I+ +G++ P + + H S G A D A++ AG+ Sbjct: 230 ILVIKSGRS-PAAQRLLHT----SSGMDPAWDA--AIQRAGLL 265 >gi|330831628|ref|YP_004394580.1| acyl-CoA synthetase [Aeromonas veronii B565] gi|328806764|gb|AEB51963.1| Acyl-CoA synthetase [Aeromonas veronii B565] Length = 860 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 47/203 (23%), Positives = 73/203 (35%), Gaps = 41/203 (20%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RL+GPN G+L P + G V LS+S ++ + Q LG S + Sbjct: 122 RLLGPNSMGMLLPGQGINASFSPIAAKPGQVAFLSQSAAVSTTILDWAKQHELGFSAFIS 181 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G +F +L+ D T +I+ I +A FL R KPI+ Sbjct: 182 LGDH--CDIDFGQLLDQLSRDSVTRAIL----IYMDKLHDARHFLSAARAASRNKPILVL 235 Query: 243 VAGKTAPPG----------------------------RTMGHAG-------AVISGGKGG 267 +G+ P T+ H+ A+IS G+G Sbjct: 236 KSGRHEPAHGLDNVYDAAIRRAGMLRVRDTHELFAAVETLSHSMTLKGERLAIISNGRGL 295 Query: 268 AEDKINAMKEAGICIAPSPARIG 290 A ++ + E G +A P IG Sbjct: 296 ANMAVDVLLERGGKLARPPLDIG 318 >gi|27983596|gb|AAM94652.1| acetyl-CoA synthetase [Spironucleus barkhanus] Length = 710 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 16/132 (12%) Query: 118 EKSSSRLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 +K R++GPN G+ TP +C RKG + LS+SG + + + +G Sbjct: 118 KKYDMRIVGPNVLGVSTPSFNCTFASRHP---RKGPIAFLSQSGAMLTSILDWSFANNIG 174 Query: 177 QSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGE--IGGSAEEEAAQFLKDEAKR 233 S + +G V TE I E D+ T+ I++ E + G A FL+ + Sbjct: 175 FSNFISLGNKCDVHETELI---EEVCEDDNTKIILLYLESIVDGPA------FLERVSVA 225 Query: 234 GRKKPIVGFVAG 245 RKKPI+ +G Sbjct: 226 SRKKPIIILKSG 237 >gi|86742184|ref|YP_482584.1| GCN5-related N-acetyltransferase [Frankia sp. CcI3] gi|86569046|gb|ABD12855.1| GCN5-related N-acetyltransferase [Frankia sp. CcI3] Length = 872 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 8/177 (4%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPG 131 + +V+ VPP+ D + A + +V +T+ + A R++GP G Sbjct: 267 DLAVVCVPPAQVPDVVAACGRAGVWGLVVLTDQRDAAADAALVAEARADGMRVVGPASMG 326 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP-VKG 190 I P + M + G +G S+SG + + G+G S V G V G Sbjct: 327 IQNPAAGLNASMVPRMPPAGRIGCYSQSGPFGGAILAAAAARGVGLSVFVSAGDRADVSG 386 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 D+L+ + D T++++M E G+ +F + + GR+KP++ +G++ Sbjct: 387 N---DLLQYWEEDPETDAVIMHLETFGNPR----KFARLARRVGRRKPVIVVYSGRS 436 >gi|84501900|ref|ZP_01000058.1| putative acetyl-CoA synthetase [Oceanicola batsensis HTCC2597] gi|84389895|gb|EAQ02529.1| putative acetyl-CoA synthetase [Oceanicola batsensis HTCC2597] Length = 463 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 20/198 (10%) Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL------DMVRVKARLEKSSSRLIGPN 128 V+ P A DA+ + ++V +T G + R++ ++ + RL+GPN Sbjct: 80 VLATPVGAALDALETCTRLNVKVVVGVTSGFSEAGDDGHENEERLRKIMQDAPFRLVGPN 139 Query: 129 CPGILTPDSCKIGIMPGSIF---RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 C G++ P S + + +F R G V ++S+SG L + + G+G + V G Sbjct: 140 CEGVVRPAS-DLQLTFSPMFNGLRPGPVAMISQSGALAGLMALRLGERGVGINAIVSSGN 198 Query: 186 DPVKGTEFIDVLELFLADEATESIV-MVGEI-GGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 + +L+ F D T ++ V E+ G EAAQ L K +V Sbjct: 199 E--TDLTAAHLLDYFGNDPQTRVVLCYVEELRDGRRFAEAAQRLTRAGKH-----VVAVK 251 Query: 244 AGKTAPPGRTM-GHAGAV 260 G++ R + H GA+ Sbjct: 252 GGRSRAGSRAVQSHTGAM 269 >gi|119715247|ref|YP_922212.1| GCN5-related N-acetyltransferase [Nocardioides sp. JS614] gi|119535908|gb|ABL80525.1| GCN5-related N-acetyltransferase [Nocardioides sp. JS614] Length = 883 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 94/189 (49%), Gaps = 16/189 (8%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL--DMVRVKARL----EKSSS 122 T + VI VP + A+ ++ +A +P V +T G + + R++ ++ + S Sbjct: 240 TPVDLVVIAVPATRVLAALEDAADASVPAAVIVTSGFSEMGEEGTRLQRQILALARRRSV 299 Query: 123 RLIGPNCPGI--LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE-GLGQST 179 R++GPNC G+ L P+ GS+ G + + S+SG + + T+QE GLG ++ Sbjct: 300 RVVGPNCLGLMSLDPEVRLNATFSGSVPPPGGLAVASQSGGVGI-VLADTAQELGLGVAS 358 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V +G + D+L + AD + + E G+A + A+F + A+R KP+ Sbjct: 359 FVSLGNKVDVSSN--DLLAAWRADPRVTAAALYLESFGNA-PKFARFARRFAER---KPL 412 Query: 240 VGFVAGKTA 248 + V G+++ Sbjct: 413 LAVVGGRSS 421 >gi|317152576|ref|YP_004120624.1| CoA-binding domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316942827|gb|ADU61878.1| CoA-binding domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 706 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 53/139 (38%), Gaps = 28/139 (20%) Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 +KA E S ++GPNC G++ P + GS+ S+SG L + Sbjct: 119 LKALCEAHSIAMLGPNCLGMMNPAHGVNASFAAGQPKAGSIAFFSQSGALCVAILDWALG 178 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE-----------E 221 E +G S + +G V DEA M+G +GG A+ E Sbjct: 179 ENIGFSKFISLGNKAV-------------IDEAD----MLGYLGGDAQTKVILGYIENVE 221 Query: 222 EAAQFLKDEAKRGRKKPIV 240 FL+ R KP++ Sbjct: 222 HGEAFLRQARAVCRNKPVI 240 >gi|288959531|ref|YP_003449872.1| GCN5-related N-acetyltransferase [Azospirillum sp. B510] gi|288911839|dbj|BAI73328.1| GCN5-related N-acetyltransferase [Azospirillum sp. B510] Length = 898 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 10/127 (7%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPN G + P RKG V ++++S + + G+G S V Sbjct: 122 RVLGPNSLGAMVPGRGMNASFAPVAPRKGDVALVAQSSMVVTSIADWATSRGIGFSHLVS 181 Query: 183 IG--GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G GD +F D+L+ +D +I++ E + A +F+ R+KP++ Sbjct: 182 LGDRGD----VDFGDLLDYLASDVTVRAILLYIE----SITHARKFMSAARSASRQKPVI 233 Query: 241 GFVAGKT 247 AG++ Sbjct: 234 VIKAGRS 240 >gi|33591865|ref|NP_879509.1| acetyl-CoA synthetase [Bordetella pertussis Tohama I] gi|33571508|emb|CAE44998.1| acetyl-CoA synthetase [Bordetella pertussis Tohama I] gi|332381282|gb|AEE66129.1| acetyl-CoA synthetase [Bordetella pertussis CS] Length = 729 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 12/105 (11%) Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI----FRKGSVGILSRSGTLTYEAVF 168 + AR S R++GPNC G++ S I G++ R GS+G+ S+SG L + Sbjct: 128 LTARARASGVRVLGPNCLGVINTRSKLIATFSGAVGHAPPRPGSIGLASQSGALGAHCLV 187 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIV 210 + G+ S G + IDV EL ++A D T IV Sbjct: 188 LAERRGIAFSVWATSGNE-----SDIDVAELIAYMATDPGTHVIV 227 >gi|323975989|gb|EGB71082.1| FdrA protein [Escherichia coli TW10509] Length = 555 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 18/182 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDC- 175 Query: 131 GILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + I P ++ +G++G++ SGT E Q + G G + A+G+GG Sbjct: 176 -----GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ D +E + V + EA + A + KP V Sbjct: 231 LSREVGGISALTALEMLSTDAKSEVLAFVSK----PPAEAVRLKIVNAMKATGKPTVALF 286 Query: 244 AG 245 G Sbjct: 287 LG 288 >gi|217969921|ref|YP_002355155.1| CoA-binding protein [Thauera sp. MZ1T] gi|217507248|gb|ACK54259.1| CoA-binding domain protein [Thauera sp. MZ1T] Length = 886 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 8/125 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGP GI P S + + G + ++S+SG + + +G S+ + Sbjct: 122 RLIGPGSLGIARPGSGINAALTRIAVKPGEIALISQSGAMCSVVLDWALTNDVGFSSVIS 181 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVM-VGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +GG ++ + LE + D T I++ V I A QF+ R KPI+ Sbjct: 182 LGG--TVDIDYGETLEYLIHDTQTRYILLHVDHI-----RNARQFMSALRSAARVKPIIL 234 Query: 242 FVAGK 246 AG+ Sbjct: 235 LKAGR 239 >gi|33598707|ref|NP_886350.1| acetyl-CoA synthetase [Bordetella parapertussis 12822] gi|33574837|emb|CAE39499.1| acetyl-CoA synthetase [Bordetella parapertussis] Length = 729 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 14/115 (12%) Query: 103 EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI----FRKGSVGILSR 158 EG+ V + AR S R++GPNC G++ S I G++ R GS+G+ S+ Sbjct: 120 EGVKV--QAELTARARASGVRVLGPNCLGVINTRSKLIATFSGAVGHAPPRPGSIGLASQ 177 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIV 210 SG L + + G+ S G + IDV EL ++A D T IV Sbjct: 178 SGALGAHCLVLAERRGIAFSVWATSGNE-----SDIDVAELIAYMATDPGTHVIV 227 >gi|301025715|ref|ZP_07189230.1| bacterial FdrA protein [Escherichia coli MS 69-1] gi|300395838|gb|EFJ79376.1| bacterial FdrA protein [Escherichia coli MS 69-1] Length = 519 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I VP A I+++ + +++ ++ + + +K + ++GP+C Sbjct: 115 ANLALISVPGDYAAAEAIKALNLGMNVMM-FSDNVSIAQEKSIKILARERQRIVMGPDC- 172 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG----D 186 G + +G ++ ++G++G++ SGT E + Q G G S A+G GG + Sbjct: 173 GTAIVNGIPLGF--ANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGHDLSE 230 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGE 214 + G + L+ D+ T IV++ + Sbjct: 231 EIGGISMLFALDALAQDDETRVIVLISK 258 >gi|33603781|ref|NP_891341.1| acetyl-CoA synthetase [Bordetella bronchiseptica RB50] gi|33577906|emb|CAE35171.1| acetyl-CoA synthetase [Bordetella bronchiseptica RB50] Length = 729 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 12/105 (11%) Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI----FRKGSVGILSRSGTLTYEAVF 168 + AR S R++GPNC G++ S I G++ R GS+G+ S+SG L + Sbjct: 128 LTARARASGVRVLGPNCLGVINTRSKLIATFSGAVGHAPPRPGSIGLASQSGALGAHCLV 187 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIV 210 + G+ S G + IDV EL ++A D T IV Sbjct: 188 LAERRGIAFSVWATSGNE-----SDIDVAELIAYMATDPGTHVIV 227 >gi|307726310|ref|YP_003909523.1| CoA-binding domain-containing protein [Burkholderia sp. CCGE1003] gi|307586835|gb|ADN60232.1| CoA-binding domain protein [Burkholderia sp. CCGE1003] Length = 731 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 24/179 (13%) Query: 123 RLIGPNCPGIL-TPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPN G TP + C P + +G + S+SG + + + +G S Sbjct: 396 RLMGPNIYGFYYTPKNLCATFCTPYDV--QGKAALSSQSGGIGMAIIGFSRSAKMGVSAI 453 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEI--GGSAEEEAAQFLKDEAKRGRKKP 238 VG+G + D+L F D+ T+ I E G A EAA A+ +KKP Sbjct: 454 VGLGNK--SDIDEDDLLTFFEQDDNTDIIAQHCEDLKDGRAFAEAA------ARVSKKKP 505 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +V AG+T+ R ++G ED ++ G+ A RSL +LL Sbjct: 506 VVVLKAGRTSLGARAASSHTGALAGNDRIYED---VFRQCGVIRA-------RSLRDLL 554 >gi|56412526|ref|YP_149601.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194442623|ref|YP_002041918.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197361461|ref|YP_002141097.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56126783|gb|AAV76289.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194401286|gb|ACF61508.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197092937|emb|CAR58366.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 886 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPTSQHEELLACARHYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|205353694|ref|YP_002227495.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273475|emb|CAR38452.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628799|gb|EGE35142.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 886 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPTSQHEELLACARHYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|168262179|ref|ZP_02684152.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205349001|gb|EDZ35632.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 886 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPTSQHEELLACARHYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|197263395|ref|ZP_03163469.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198241823|ref|YP_002216666.1| CoA-binding domain/acetyltransferase domain-containing protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197241650|gb|EDY24270.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197936339|gb|ACH73672.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326624422|gb|EGE30767.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 886 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPTSQHEELLACARHYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|16765971|ref|NP_461586.1| acetyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161612629|ref|YP_001586594.1| hypothetical protein SPAB_00324 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168245085|ref|ZP_02670017.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168468065|ref|ZP_02701902.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194449788|ref|YP_002046660.1| CoA binding domain/acetyltransferase domain-containing protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|16421201|gb|AAL21545.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161361993|gb|ABX65761.1| hypothetical protein SPAB_00324 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194408092|gb|ACF68311.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195628872|gb|EDX48286.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205336131|gb|EDZ22895.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|261247849|emb|CBG25678.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994792|gb|ACY89677.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159202|emb|CBW18717.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913645|dbj|BAJ37619.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226006|gb|EFX51059.1| Protein acetyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130989|gb|ADX18419.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989580|gb|AEF08563.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 886 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPTSQHEELLACARHYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|224584506|ref|YP_002638304.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224469033|gb|ACN46863.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 886 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPTSQHEELLACARHYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|207858005|ref|YP_002244656.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206709808|emb|CAR34160.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 886 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPTSQHEELLACARHYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|204929498|ref|ZP_03220572.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321217|gb|EDZ06417.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|322613368|gb|EFY10310.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620428|gb|EFY17293.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625104|gb|EFY21933.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629452|gb|EFY26228.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633839|gb|EFY30578.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635445|gb|EFY32156.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639879|gb|EFY36558.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644235|gb|EFY40779.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649927|gb|EFY46347.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654890|gb|EFY51207.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658182|gb|EFY54448.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661746|gb|EFY57964.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669727|gb|EFY65873.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673266|gb|EFY69371.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322674945|gb|EFY71032.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682968|gb|EFY78986.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685629|gb|EFY81624.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323191943|gb|EFZ77181.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200424|gb|EFZ85505.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201323|gb|EFZ86390.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208394|gb|EFZ93334.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211531|gb|EFZ96369.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215962|gb|EGA00694.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221743|gb|EGA06151.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225649|gb|EGA09876.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229367|gb|EGA13491.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235318|gb|EGA19402.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237496|gb|EGA21559.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245251|gb|EGA29252.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246476|gb|EGA30457.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253993|gb|EGA37815.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259043|gb|EGA42691.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261966|gb|EGA45531.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267749|gb|EGA51230.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269692|gb|EGA53144.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 886 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPTSQHEELLACARHYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|154245686|ref|YP_001416644.1| GCN5-related N-acetyltransferase [Xanthobacter autotrophicus Py2] gi|154159771|gb|ABS66987.1| GCN5-related N-acetyltransferase [Xanthobacter autotrophicus Py2] Length = 903 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 14/122 (11%) Query: 123 RLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R++GPN G ++ ++ +MP KG V +S+SG +T + G G S Sbjct: 129 RVLGPNGLGFISTRPHINASIAHLMPA----KGDVAFVSQSGAMTSAVLDWAHTRGFGFS 184 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V +G +F D+L+ D T +I++ E ++A +F+ R KP Sbjct: 185 HVVSLGES--ADVDFGDMLDYLALDNTTRAILLYVE----HVKDARKFMSAGRIAARSKP 238 Query: 239 IV 240 ++ Sbjct: 239 VI 240 >gi|331697761|ref|YP_004334000.1| GCN5-like N-acetyltransferase [Pseudonocardia dioxanivorans CB1190] gi|326952450|gb|AEA26147.1| GCN5-related N-acetyltransferase [Pseudonocardia dioxanivorans CB1190] Length = 951 Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 84/194 (43%), Gaps = 25/194 (12%) Query: 74 SVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP------VLDMVRVKARLEKSSSRLIGP 127 +V+ VP +G + + + + ++ ++ G ++ R+ R++GP Sbjct: 323 AVVAVPAAGIDEVMDSCLAKGVKALIVVSSGFADAGSHGLVAERRMVEAARAHGMRVVGP 382 Query: 128 NCPGILTP------DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 N G+ ++ +PG+ G VG S+SG L + ++ GLG ST V Sbjct: 383 NALGVANTAAGVRLNATLAPALPGA----GRVGFFSQSGALGIALLQAATERGLGLSTFV 438 Query: 182 GIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 G V G D+L+ + +D T+ +++ E G+ +F + + R P+V Sbjct: 439 SAGNRADVSGN---DLLQYWQSDPDTDVVLLYLETFGNPR----KFGRLARRLARTTPVV 491 Query: 241 GFVAGKTAP-PGRT 253 +G+ P P R+ Sbjct: 492 AVKSGRRVPLPARS 505 >gi|289524303|ref|ZP_06441157.1| protein FdrA [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502475|gb|EFD23639.1| protein FdrA [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 508 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 11/180 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I + AGD +E + + +++ ++ + + + +K ++ ++GP+C Sbjct: 114 ANLALISIAGQYAGDEAMECLNKGLHVML-YSDNVSLEKEIELKNIAKEKGLLVMGPDCG 172 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK- 189 + IG+ + G VG+++ +GT E Q + G+G A+G GG VK Sbjct: 173 TAVIKG---IGLGFANACPVGPVGMVAAAGTGLQEVHVQLAHRGIGVLHAIGTGGRDVKE 229 Query: 190 ---GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 G + +E L + + IVMVG+ +AE E F + G K ++G++ G+ Sbjct: 230 AVGGITSLMGIEALLESDDVKVIVMVGK-PPAAEVEKKIFQR--LASGNKPAVLGYIGGE 286 >gi|238912716|ref|ZP_04656553.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 886 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPTSQHEELLACARHYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|168232179|ref|ZP_02657237.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194468756|ref|ZP_03074740.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194455120|gb|EDX43959.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333679|gb|EDZ20443.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 886 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPTSQHEELLACARHYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|197251689|ref|YP_002147555.1| CoA binding domain/acetyltransferase domain-containing protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197215392|gb|ACH52789.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 886 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPTSQHEELLACARHYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|62181226|ref|YP_217643.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128859|gb|AAX66562.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715714|gb|EFZ07285.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 886 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPTSQHEELLACARHYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|14521625|ref|NP_127101.1| hypothetical protein PAB1431 [Pyrococcus abyssi GE5] gi|5458844|emb|CAB50331.1| acdA-4 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain [Pyrococcus abyssi GE5] Length = 442 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 12/167 (7%) Query: 99 VCITEGIPVLDMVRVKARLEKSSS----RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 V I+ G + V ++ L K++ R+IGPNC GI G + G + Sbjct: 92 VVISAGFSEVGNVDLEEELIKAAKEAGIRIIGPNCAGIFGVHGKFFGSFEVRV-NPGGLA 150 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++S+SG A+ ++E +G S V G + D L F DE T+ I + E Sbjct: 151 LISQSGAFGGAALAMGNEENVGFSAFVSYGN--AADLDESDFLRYFADDENTKVIALYIE 208 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAV 260 ++ +F + KKP++ AGK+ + H G++ Sbjct: 209 ----GVKDGRKFFEALKYATSKKPVIILKAGKSESGAKAAQSHTGSL 251 >gi|159029029|emb|CAO90015.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 908 Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 94/215 (43%), Gaps = 15/215 (6%) Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII-ESIEAEIPLIVCITEGIPVL---- 108 +++P ++++ + + AA VI P+ AII +S+E ++ + ++ G Sbjct: 71 LDLPTYSSLEDIQ---AAIDLVIITAPAPEIPAIIAQSVEKKVKCALILSTGFRETGQMG 127 Query: 109 -DMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 +++R + R+IGP+ GI + + GS+ ++S+SG + + Sbjct: 128 ENLLREIKAIAGQKLRIIGPHSSGICNLSQNLNATFSPILPKTGSIALISQSGAIAAAVL 187 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + E +G S + +G + ++ ++L D T+SIV+ E + A FL Sbjct: 188 DWSLSENVGFSHFISLG--VLLDVDWGELLYYLGDDPQTKSIVIYLE----SLNNARSFL 241 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 + KPI+ T ++ HAG + S Sbjct: 242 SSAREVALNKPIIAISRHSTDFDPTSLSHAGKLTS 276 >gi|325968971|ref|YP_004245163.1| CoA-binding protein [Vulcanisaeta moutnovskia 768-28] gi|323708174|gb|ADY01661.1| CoA-binding domain protein [Vulcanisaeta moutnovskia 768-28] Length = 464 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 7/146 (4%) Query: 123 RLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R++GPNC GI D+ I + R G + ++S+SG + + ++ +G Sbjct: 125 RILGPNCIGIYNAFNGLDTFFIPQVRMERPRPGPIALISQSGAVAAAILDWAARRSIGVG 184 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 AV G + + +E +++L ++E IV+ E G +E + L+ + R KP Sbjct: 185 LAVNYG-NKLDISE-VELLGALASNENVRVIVIYIE-GLKYADEGRKLLEVMRQVTRIKP 241 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGG 264 IV + AG++ R + A ++G Sbjct: 242 IVVYKAGRSKSSSRAVKSHTAALAGN 267 >gi|147678085|ref|YP_001212300.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI] gi|146274182|dbj|BAF59931.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI] Length = 700 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 30/251 (11%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL--DMVRV 113 +P + ++ A E A ++I VP + +A E + + +V I+ G + + + Sbjct: 55 IPCYPSIERAPE--PAGLAIISVPAAKVLEAAEECGKTGVKYLVVISAGFKETGKEGLEL 112 Query: 114 KARL----EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 + RL +K R++GPNC G + K + +S+SG + + Sbjct: 113 ERRLVETCKKYKMRMLGPNCVGFMDTHVPINASFAAGFPMKDEIAFISQSGAMVLSILDW 172 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE---SIVMVGEIGGSAEEEAAQF 226 + Q GLG S V +G ++ E L ++A E + V++ I E F Sbjct: 173 SFQAGLGFSKFVSLGNKA-------ELTEAHLIEDAAEDPYTKVILCYIEDV--ENGPHF 223 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 L+ + RKKP++ +G + + ++G E A ++ G+ A Sbjct: 224 LEVARRASRKKPVIILKSGTSQAGAQAASSHTGALAGSDLAYE---TAFRQCGVIRA--- 277 Query: 287 ARIGRSLVELL 297 RS+ EL Sbjct: 278 ----RSMPELF 284 >gi|311109867|ref|YP_003982718.1| CoA binding domain-containing protein 6 [Achromobacter xylosoxidans A8] gi|310764556|gb|ADP20003.1| CoA binding domain protein 6 [Achromobacter xylosoxidans A8] Length = 721 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 17/111 (15%) Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRK---------GSVGILSRSGTLTYEAVFQT 170 S R++GPNC GI + K+G G +F+ G VG++S+SG L Y A+ Q Sbjct: 132 SGMRILGPNCLGIA---NNKLGA--GLLFQMGYAALQHPPGRVGLVSQSGALGY-ALLQG 185 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 + G+ + + G + +D+ + D + S+ V E G AE Sbjct: 186 ANHGMAYTHLLTAGNS--CDVDTLDLANYLVHDADSRSVACVLEAAGDAER 234 >gi|200387306|ref|ZP_03213918.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199604404|gb|EDZ02949.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 886 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 21/185 (11%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P + A RL+GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPTSQHEELLACARHYKMRLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +A +F+ R KPI+ +G++ R + S G A D A+ Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AI 259 Query: 276 KEAGI 280 + AG+ Sbjct: 260 QRAGL 264 >gi|34557415|ref|NP_907230.1| hypothetical protein WS1029 [Wolinella succinogenes DSM 1740] gi|34483131|emb|CAE10130.1| conserved hypothetical protein [Wolinella succinogenes] Length = 644 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 44/194 (22%), Positives = 84/194 (43%), Gaps = 13/194 (6%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL----DMVRVKARLEKSSSRLIGP 127 + +V+ +P S I + + + +V IT G D +++ +K + +IGP Sbjct: 284 DMAVLVIPVSSVIPTIEKLVLKNLKNLVIITAGFKESGNEEDELKIAELAKKHNFNVIGP 343 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 NC G S S KG++ ++S+SG + + + +G S + G Sbjct: 344 NCLGYYNAQSDLNLTFGSSNVHKGNLALISQSGAVLASLMDKAYSGNVGFSHLISAGN-- 401 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + F +++++ +AD A E+I + E + +FL+ +R KK I F GK+ Sbjct: 402 MVDLNFSEMVDMLVADPACEAISVYAE----GIKNGKRFLRS-IRRSHKK-IYVFKTGKS 455 Query: 248 APPGR-TMGHAGAV 260 + H G + Sbjct: 456 EESKKAAFSHTGNL 469 >gi|14590516|ref|NP_142584.1| hypothetical protein PH0625 [Pyrococcus horikoshii OT3] gi|3257031|dbj|BAA29714.1| 440aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 440 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 12/167 (7%) Query: 99 VCITEGIPVLDMVRVKARL----EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 V I+ G + V ++ L ++S R+IGPNC GI G + G + Sbjct: 92 VVISAGFSEVGNVELEEELIRAAKESGIRIIGPNCAGIFGVHGKFFGSFEVRV-NPGGLA 150 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++S+SG A+ ++E +G S V G + D L F DE T+ I + E Sbjct: 151 LISQSGAFGGAALAMGNEENVGFSAFVSYGN--AADLDESDFLRYFADDENTKVIALYIE 208 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAV 260 ++ +F + KKP++ AGK+ + H G++ Sbjct: 209 ----GVKDGRKFFEALKYATSKKPVIILKAGKSKSGAKAAQSHTGSL 251 >gi|296269560|ref|YP_003652192.1| CoA-binding domain-containing protein [Thermobispora bispora DSM 43833] gi|296092347|gb|ADG88299.1| CoA-binding domain protein [Thermobispora bispora DSM 43833] Length = 697 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 12/117 (10%) Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKAR-LEKSSSRLIGP 127 V+ VP +G + E+++ + IT G LD R AR + + +R++GP Sbjct: 81 VLCVPAAGVPQVVREALDKGARGFLGITAG---LDRALHPGAERELAREIRRRGARIVGP 137 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 NC GI D+ + F G +GI+S+SG L E + GLG S V +G Sbjct: 138 NCLGIY--DAATDLQLAWGEFTPGPLGIVSQSGQLGSELANLAADSGLGVSRFVSVG 192 >gi|325927513|ref|ZP_08188751.1| acyl-CoA synthetase (NDP forming) [Xanthomonas perforans 91-118] gi|325542106|gb|EGD13610.1| acyl-CoA synthetase (NDP forming) [Xanthomonas perforans 91-118] Length = 902 Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 10/136 (7%) Query: 115 ARLEKSSS----RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 AR+E ++ R++GP+C G++ P + + + G + ++S S + V Sbjct: 113 ARMESAARAKGMRILGPHCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWG 172 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 +G S V +G +F D+L+ F D T +I++ E G +A +F+ Sbjct: 173 VARSVGFSAVVSLGD--TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAA 226 Query: 231 AKRGRKKPIVGFVAGK 246 R KP+V +G+ Sbjct: 227 RAAARAKPVVVVKSGR 242 >gi|225568278|ref|ZP_03777303.1| hypothetical protein CLOHYLEM_04352 [Clostridium hylemonae DSM 15053] gi|225162997|gb|EEG75616.1| hypothetical protein CLOHYLEM_04352 [Clostridium hylemonae DSM 15053] Length = 484 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 27/173 (15%) Query: 94 EIPLIVCIT---------EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP----DSCKI 140 ++ +IVCI EGI D + A EK R++GPNC GI+ D+ + Sbjct: 97 DVKVIVCIAADYGETKTEEGIRRQDCLIQTA--EKYGIRVVGPNCIGIIDNINRVDTTFV 154 Query: 141 GIMPGSIFR--KGSVGILSRSGTLTYEAVFQTSQEG---LGQSTAVGIGGDPVKGTEFID 195 + R KG + +S+SG + ++ G + + + IG + + ID Sbjct: 155 ETLIPKEMRGQKGGISFISQSGAMA-ASILMMGASGPAPISMNKFISIGN--MADVDCID 211 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 +LE F D T+ I M E + + + A+ RKKP+V G+++ Sbjct: 212 LLEYFEQDADTKVIGMYLE----GYPDGRKLIDTLARIARKKPVVILKVGRSS 260 >gi|258406251|ref|YP_003198993.1| CoA-binding domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257798478|gb|ACV69415.1| CoA-binding domain protein [Desulfohalobium retbaense DSM 5692] Length = 904 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 67/161 (41%), Gaps = 13/161 (8%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPNC G++ P + + G + +S+S +L+ + S G+G S V Sbjct: 129 RILGPNCLGLIIPGNGLNASFAHTDVLPGRIAFVSQSDSLSQAVLDWASSRGIGFSHFVS 188 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G +F V++ D T+SI++ E + A F+ R KPI+ Sbjct: 189 LGDS--SDIDFHGVIDYLGNDPFTKSILLYIE----DIKNARPFMSAVRSSSRNKPILVI 242 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKIN--AMKEAGIC 281 G+ +G + G + D + A + AG+ Sbjct: 243 KGGR-----EELGKESRISHAGMLTSHDDVYDAAFRRAGML 278 >gi|256376047|ref|YP_003099707.1| CoA-binding domain protein [Actinosynnema mirum DSM 43827] gi|255920350|gb|ACU35861.1| CoA-binding domain protein [Actinosynnema mirum DSM 43827] Length = 852 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 17/150 (11%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK----GSV 153 +V +T G+ D + A + K R++GPNC G+ + D M + RK G + Sbjct: 259 MVVVTSGV---DPKPLLASVHKHGMRMVGPNCIGVASTDPEV--RMDATFTRKGSGGGGI 313 Query: 154 GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMV 212 G++++SG + + Q S G+G + V G V G D+L + DE T S+V+ Sbjct: 314 GLVTQSGGVAIAVLEQLSALGMGTTDVVSTGDKYDVSGN---DLLLWWERDERTTSVVLY 370 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 E G+ +F + + R+KP++ Sbjct: 371 LESFGNPR----KFSRLARRVARRKPVLAI 396 >gi|91213369|ref|YP_543355.1| hypothetical protein UTI89_C4407 [Escherichia coli UTI89] gi|117626101|ref|YP_859424.1| hypothetical protein APECO1_2634 [Escherichia coli APEC O1] gi|218560904|ref|YP_002393817.1| enzyme, Succinyl-CoA synthetase, alpha subunit [Escherichia coli S88] gi|237702855|ref|ZP_04533336.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|91074943|gb|ABE09824.1| hypothetical protein YahF [Escherichia coli UTI89] gi|115515225|gb|ABJ03300.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|218367673|emb|CAR05462.1| Putative enzyme, Putative Succinyl-CoA synthetase, alpha subunit [Escherichia coli S88] gi|226903026|gb|EEH89285.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|294491058|gb|ADE89814.1| protein FdrA [Escherichia coli IHE3034] gi|307628904|gb|ADN73208.1| Putative enzyme, Putative Succinyl-CoA synthetase, alpha subunit [Escherichia coli UM146] gi|315284731|gb|EFU44176.1| bacterial FdrA protein [Escherichia coli MS 110-3] gi|323949274|gb|EGB45164.1| FdrA protein [Escherichia coli H252] gi|323954051|gb|EGB49849.1| FdrA protein [Escherichia coli H263] Length = 519 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I VP A I+++ + +++ ++ + + +K + ++GP+C Sbjct: 115 ANLALISVPGDYAAAEAIKALNLGMNVMM-FSDNVSIGQEKSIKTLARERQRIVMGPDC- 172 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG----D 186 G + +G ++ ++G++G++ SGT E + Q G G S A+G GG + Sbjct: 173 GTAIVNGIPLGF--ANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGHDLSE 230 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGE 214 + G + L+ D+ T IV++ + Sbjct: 231 EIGGISMLFALDALAQDDETRVIVLISK 258 >gi|224371769|ref|YP_002605933.1| SucD4 [Desulfobacterium autotrophicum HRM2] gi|223694486|gb|ACN17769.1| SucD4 [Desulfobacterium autotrophicum HRM2] Length = 897 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 65/128 (50%), Gaps = 14/128 (10%) Query: 123 RLIGPNCPGILTPD---SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R++GP+ G++ P + G P G++ ++++SGT+ + + +G+G S Sbjct: 129 RIVGPSSLGVMVPGIGLNASFGHAPP---LSGNLALVAQSGTVLTAVLDWGTSQGIGFSK 185 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVM-VGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V +G + +F D+L+ D +T++I++ + EI G A +F+ R KP Sbjct: 186 CVALG--EMADGDFGDMLDYLAYDYSTQAILLYIEEITG-----ARKFISAARAVARIKP 238 Query: 239 IVGFVAGK 246 ++ AG+ Sbjct: 239 VIVVKAGR 246 >gi|18313669|ref|NP_560336.1| hypothetical protein PAE2895 [Pyrobaculum aerophilum str. IM2] gi|18161219|gb|AAL64518.1| conserved hypothetical protein, authentic frameshift [Pyrobaculum aerophilum str. IM2] Length = 359 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 9/145 (6%) Query: 123 RLIGPNCPGILTP-DSCKIGIMPGSIFRK---GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R++GPNC G+ + +P + G + LS+SG + A+ + E +G Sbjct: 124 RVLGPNCIGVYNAFNGLDTMFLPAEKAGRPPAGPIAFLSQSGAVMTAALDWAAGEYVGVG 183 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 AV G+ TE D LE DE + + + E G + A+FL+ K KP Sbjct: 184 IAVNF-GNRADVTE-ADFLEFLEGDERIKVVALYLE-GFRRRSDVARFLQIVKK--MDKP 238 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISG 263 IV + AG+ R + A ++G Sbjct: 239 IVVYKAGRGNDAQRAVASHTAAMAG 263 >gi|226365191|ref|YP_002782974.1| acyl-CoA synthetase [Rhodococcus opacus B4] gi|226243681|dbj|BAH54029.1| putative acyl-CoA synthetase [Rhodococcus opacus B4] Length = 687 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 4/109 (3%) Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + VP D + E++ + + IT GIP + AR+ + +RL+G N GI Sbjct: 81 LCVPAPFVSDVVDEALALGVRGFLGITSGIPA--EADLAARIRSAGARLVGTNSLGIY-- 136 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 DS + F G + I+S+SG L E ++ G+G S V IG Sbjct: 137 DSATDLSLAWGRFTPGPLAIVSQSGQLGSELATLGARHGVGVSRFVSIG 185 >gi|169831058|ref|YP_001717040.1| ATP-grasp domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169637902|gb|ACA59408.1| ATP-grasp domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 700 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 41/251 (16%) Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP---VLDMVRV 113 P + +V E + +VI VP +G + E A + +V I+ G + R Sbjct: 56 PAYASVTEVP--GSVEVAVIAVPAAGVLPVVEECGRAGVKHLVVISAGFKETGAEGLERE 113 Query: 114 K---ARLEKSSSRLIGPNCPGIL---TPDSCKIGI-MPGSIFRKGSVGILSRSGTLTYEA 166 K A KS R++GPN GI+ TP + PG +G + +S+SG + Sbjct: 114 KELVATARKSGMRVVGPNSVGIMDTHTPLNASFAAGFPG----RGEITFISQSGAMLVAI 169 Query: 167 VFQTSQEGLGQSTAVGIGG-DPVKGTEFIDVLELFLADEATESIVM--VGEIGGSAEEEA 223 + + GLG S + +G + +FI +AD+ T +++ + ++ + Sbjct: 170 LDWSLITGLGFSKFISLGNKSDLNEADFIAA----VADDPTTKVILCYIEDVA-----DG 220 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-----AMKEA 278 +FL+ ++ RKKPIV +G + AGA + GA I+ A ++A Sbjct: 221 LRFLEVSSQVCRKKPIVVLKSGTS--------QAGAQAASSHTGALAGIDLAYEVAFRQA 272 Query: 279 GICIAPSPARI 289 G+ P+ A + Sbjct: 273 GVIRVPTMAEL 283 >gi|84501817|ref|ZP_00999975.1| putative pimeloyl-CoA synthetase [Oceanicola batsensis HTCC2597] gi|84389812|gb|EAQ02446.1| putative pimeloyl-CoA synthetase [Oceanicola batsensis HTCC2597] Length = 715 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 14/167 (8%) Query: 124 LIGPNCPGILTPDSCKIG----IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +IGPNC GI+ + + +M G G+ G +S+SG L + + + GLG S+ Sbjct: 144 MIGPNCLGIMNGNHKMLASSTVVMGGRKLPGGNYGFISQSGALGTYWLDMSMKAGLGVSS 203 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + G + + L+ + D+ TE I + E + AA R+KP+ Sbjct: 204 WISTGNE--ADVDLAACLDYLVEDDETEVIGLYIE---GVRDGAAFRAAARKAFERRKPV 258 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPS 285 + +G + R A A +G G ++ +A ++ IC + S Sbjct: 259 LVLKSGSS----RQGATAAASHTGALAGEDEAYDAVFRQYNICRSDS 301 >gi|157382774|gb|ABV48824.1| ATP citrate lyase alpha subunit [Caminibacter hydrogeniphilus] Length = 334 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 8/97 (8%) Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAG--- 245 G+ FID + + + ++++GE+GG E + + +K+ G+ KP++G+ G Sbjct: 3 GSTFIDHMLRMEKNPKVKYMILLGEVGGREEYKIIEAIKE----GKITKPVIGWCIGTIA 58 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 K G GHAGA + + AE K AM+EAGI + Sbjct: 59 KHFSSGVQFGHAGASANAEEETAEAKNRAMEEAGIHV 95 >gi|294634931|ref|ZP_06713449.1| acetyltransferase, GNAT family [Edwardsiella tarda ATCC 23685] gi|291091640|gb|EFE24201.1| acetyltransferase, GNAT family [Edwardsiella tarda ATCC 23685] Length = 890 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 8/141 (5%) Query: 118 EKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ RL+GPN G+L P P I G + +S+S ++ + Q +G Sbjct: 115 QQHGVRLLGPNSLGVLAPWQKLNASFSPVPIL-PGRLAFISQSAAVSNTILDWARQREIG 173 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S V +G ++ ++L+ D T +I++ E +A +FL R Sbjct: 174 FSLFVALGDS--LDSDVDELLDYLARDAKTGAILLYLE----HLHDARRFLSAARSAARN 227 Query: 237 KPIVGFVAGKTAPPGRTMGHA 257 KPI+ +G++ +G A Sbjct: 228 KPILVIKSGRSPQARHVLGEA 248 >gi|197103925|ref|YP_002129302.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein [Phenylobacterium zucineum HLK1] gi|196477345|gb|ACG76873.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein [Phenylobacterium zucineum HLK1] Length = 889 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 16/123 (13%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGS-----VGILSRSGTLTYEAVFQTSQEGLGQ 177 R++GPNC G ++P + GI + F +GS V ++++SG + + G+G Sbjct: 128 RIVGPNCLGFMSP---RRGI--NASFARGSAPPGGVALVAQSGAVASALLDWAPAHGVGF 182 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V +G + D+L+ D T++I++ E EA +F+ R K Sbjct: 183 SHVVTLGN--ALDVDVADMLDHLGRDPETKAILLYLE----GLREARKFMSAARFAARSK 236 Query: 238 PIV 240 P+V Sbjct: 237 PVV 239 >gi|323189745|gb|EFZ75024.1| protein fdrA [Escherichia coli RN587/1] Length = 519 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I VP A I+++ + +++ ++ + + +K + ++GP+C Sbjct: 115 ANLALISVPGDYAAAEAIKALNLGMNVMM-FSDNVSIGQEKSIKTLARERQRIVMGPDC- 172 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG----D 186 G + +G ++ ++G++G++ SGT E + Q G G S A+G GG + Sbjct: 173 GTAIVNGIPLGF--ANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGHDLSE 230 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGE 214 + G + L+ D+ T IV++ + Sbjct: 231 EIGGISMLFALDALAQDDETRVIVLISK 258 >gi|218692115|ref|YP_002400327.1| putative succinyl-CoA synthetase subunit alpha [Escherichia coli ED1a] gi|218429679|emb|CAR10643.2| Putative enzyme, Putative Succinyl-CoA synthetase, alpha subunit [Escherichia coli ED1a] Length = 519 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I VP A I+++ + +++ ++ + + +K + ++GP+C Sbjct: 115 ANLALISVPGDYAAAEAIKALNLGMNVMM-FSDNVSIGQEKSIKTLARERQRIVMGPDC- 172 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG----D 186 G + +G ++ ++G++G++ SGT E + Q G G S A+G GG + Sbjct: 173 GTAIVNGIPLGF--ANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGHDLSE 230 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGE 214 + G + L+ D+ T IV++ + Sbjct: 231 EIGGISMLFALDALAQDDETRVIVLISK 258 >gi|241765036|ref|ZP_04763030.1| CoA-binding domain protein [Acidovorax delafieldii 2AN] gi|241365348|gb|EER60159.1| CoA-binding domain protein [Acidovorax delafieldii 2AN] Length = 713 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 23/151 (15%) Query: 111 VRVKARLEKSSSR----LIGPNCPGILTPDSCKIGIMPGSIFRK-------GSVGILSRS 159 V ++ARLE+ + R + GPNC G ++ ++F+ G I+++S Sbjct: 111 VELQARLEQFAQRTGMVIAGPNCMGFANINTHAYTAF-AAVFKNVPVQTQCGRASIITQS 169 Query: 160 GTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSA 219 G + + G+ S + G + V EF + LE D+ATE ++ G Sbjct: 170 GNVCSAVFALIRKLGIPVSHFINTGNEAV--VEFSEYLEYMAQDDATECVI------GYV 221 Query: 220 EE--EAAQFLK-DEAKRGRKKPIVGFVAGKT 247 E+ +F+ A +KKP++ + AG+T Sbjct: 222 EQLRNGPRFIHAALALAAQKKPLIIYKAGET 252 >gi|294141080|ref|YP_003557058.1| GNAT family acetyltransferase [Shewanella violacea DSS12] gi|293327549|dbj|BAJ02280.1| acetyltransferase, GNAT family [Shewanella violacea DSS12] Length = 896 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 31/144 (21%), Positives = 65/144 (45%), Gaps = 8/144 (5%) Query: 104 GIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLT 163 GI +L + + A+ + RL+GPN G++ P+ + + G + +S+S + Sbjct: 112 GINLLTLAKNNAK--RYGMRLLGPNSLGMMLPNLGLNASLAHTSALPGKIAFVSQSAAIC 169 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 + + +G+G S + +G +F ++L+ D T +I++ + + E Sbjct: 170 TTVLDWANNKGIGFSCFISLGD--TTDIDFDELLDYLGRDSRTSAIMLYID----SISEK 223 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKT 247 FL R KPI+ +G++ Sbjct: 224 RHFLSAARAASRNKPILVIKSGRS 247 >gi|158521259|ref|YP_001529129.1| CoA-binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158510085|gb|ABW67052.1| CoA-binding domain protein [Desulfococcus oleovorans Hxd3] Length = 753 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 9/156 (5%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQT 170 RV R + ++GPN GI P K+ ++ G + ++S+SG + + + Sbjct: 381 RVVERARAADILMVGPNTMGIANP-HIKLYCTGTHVWPDPGGIAMVSQSGNMGGQLLQFA 439 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 Q+G+ G G + + E D L F DE +E +++ E + ++ +FL+ Sbjct: 440 EQQGIEIRAFSGSGNEAMVTIE--DYLHAFEVDELSEIVMLYIE----SVKDGRRFLEYA 493 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMG-HAGAVISGGK 265 + KKPIV G+T + H GA+ S + Sbjct: 494 RRLSMKKPIVLLKGGQTKVGEKAAASHTGAMASDAR 529 >gi|134299927|ref|YP_001113423.1| CoA-binding domain-containing protein [Desulfotomaculum reducens MI-1] gi|134052627|gb|ABO50598.1| CoA-binding domain protein [Desulfotomaculum reducens MI-1] Length = 701 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%) Query: 112 RVKARLEKSSSRLIGPNCPGIL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 R+ + +K L+GPNC G++ T I P S ++G +G +S+SG + + + Sbjct: 115 RLVSICKKYGIHLLGPNCEGMMDTRIPLNASISP-SFPKRGDIGFISQSGAMLLSIMDWS 173 Query: 171 SQEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 LG S +G V T+ I L D T+ I+ E ++ +FL+ Sbjct: 174 RTVSLGFSRVFSLGNKADVSETDLIKCLA---NDPLTKVILCYIE----DVQKGKEFLEV 226 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMG--HAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 +K +KKP++ +G T+ G H GA++ G E A +AGI A Sbjct: 227 ASKATKKKPVIILKSG-TSQAGTLAASSHTGALV-GSDLAYE---TAFTQAGILRA---- 277 Query: 288 RIGRSLVELL 297 R++ EL Sbjct: 278 ---RTMTELF 284 >gi|324007497|gb|EGB76716.1| bacterial FdrA protein [Escherichia coli MS 57-2] Length = 519 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I VP A I+++ + +++ ++ + + +K + ++GP+C Sbjct: 115 ANLALISVPGDYAAAEAIKALNLGMNVMM-FSDNVSIGQEKSIKTLARERQRIVMGPDC- 172 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG----D 186 G + +G ++ ++G++G++ SGT E + Q G G S A+G GG + Sbjct: 173 GTAIVNGIPLGF--ANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGHDLSE 230 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGE 214 + G + L+ D+ T IV++ + Sbjct: 231 EIGGISMLFALDALAQDDETRVIVLISK 258 >gi|331649667|ref|ZP_08350749.1| FdrA [Escherichia coli M605] gi|330908143|gb|EGH36662.1| protein fdrA [Escherichia coli AA86] gi|331041537|gb|EGI13685.1| FdrA [Escherichia coli M605] Length = 519 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I VP A I+++ + +++ ++ + + +K + ++GP+C Sbjct: 115 ANLALISVPGDYAAAEAIKALNLGMNVMM-FSDNVSIGQEKSIKTLARERQRIVMGPDC- 172 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG----D 186 G + +G ++ ++G++G++ SGT E + Q G G S A+G GG + Sbjct: 173 GTAIVNGIPLGF--ANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGHDLSE 230 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGE 214 + G + L+ D+ T IV++ + Sbjct: 231 EIGGISMLFALDALAQDDETRVIVLISK 258 >gi|157148464|ref|YP_001455783.1| membrane protein FdrA [Citrobacter koseri ATCC BAA-895] gi|157085669|gb|ABV15347.1| hypothetical protein CKO_04290 [Citrobacter koseri ATCC BAA-895] Length = 553 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 7/121 (5%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILS 157 ++ ++ +P+ V +K + ++GP+C + S + ++ +G +G++ Sbjct: 144 VMLFSDNVPLEQEVELKTMARERGLIVMGPDCGTAMIAGSP---LAFANVLPEGGIGVIG 200 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVG 213 SGT E Q + G S A+G+GG V G + L++ AD+AT I V Sbjct: 201 ASGTGIQEVTSQIALHQQGISHAIGLGGRDLSAEVGGISALTALDMLAADDATRVIAFVS 260 Query: 214 E 214 + Sbjct: 261 K 261 >gi|156937180|ref|YP_001434976.1| CoA-binding domain-containing protein [Ignicoccus hospitalis KIN4/I] gi|156566164|gb|ABU81569.1| CoA-binding domain protein [Ignicoccus hospitalis KIN4/I] Length = 455 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 28/221 (12%) Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV 113 + VP + ++ E + +V+ VP S + ++IE ++ ++ IT G + + Sbjct: 49 LGVPCYPSLREVPDEV--ELAVVAVPTSAVEAVVDDAIEKDVRALIIITSGFSEVGNEEL 106 Query: 114 KARL-EKSSS---RLIGPNCPGILTPDSCKIGIMPGSIFRKG--------SVGILSRSGT 161 + R+ EK+ S R++GPNC GI S + FR+ + ++S+SG Sbjct: 107 ENRIKEKALSHGIRVVGPNCLGIYYYPSG----LDTFFFREAGTPRPRPSGLALVSQSGA 162 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 L + + G G AV +G G +VL +L E +M I G E Sbjct: 163 LAASLMDWAASRGCGVGAAVSLGNKVDVGES--EVLN-YLFGEGFNHFLMY--IEGLREG 217 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 E FL+ K +GF G GR A AV S Sbjct: 218 EGKAFLETVLKLRLGGARIGFYKG-----GRKRESAAAVAS 253 >gi|168238346|ref|ZP_02663404.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735388|ref|YP_002115663.1| CoA binding domain/acetyltransferase domain-containing protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194710890|gb|ACF90111.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288830|gb|EDY28203.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 886 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 21/162 (12%) Query: 123 RLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 RL+GPN G+L P P I ++G + +S+S ++ + Q +G S + Sbjct: 120 RLLGPNSLGLLAPWQGLNASFSPVPI-KQGKLAFISQSAAVSNTILDWAQQREMGFSYFI 178 Query: 182 GIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + GD + IDV EL +LA D T +I++ E +A +F+ R KP Sbjct: 179 AL-GDSLD----IDVDELLDYLARDSKTSAILLYLE----QLSDARRFVSAARSASRNKP 229 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 I+ +G++ R + S G A D A++ AG+ Sbjct: 230 ILVIKSGRSPAAQRLLN-----TSAGMDPAWDA--AIQRAGL 264 >gi|148264936|ref|YP_001231642.1| CoA-binding domain-containing protein [Geobacter uraniireducens Rf4] gi|146398436|gb|ABQ27069.1| CoA-binding domain protein [Geobacter uraniireducens Rf4] Length = 451 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 24/183 (13%) Query: 123 RLIGPNCPGILTP-DSCKIGIMPGSIF---RKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RL+GPNC G+ P +P +KG+V ++S+SG L + + G G S Sbjct: 121 RLLGPNCLGVFAPYQRLDTLFLPRERLKRPKKGNVAVVSQSGALLLCLLETLAVSGRGVS 180 Query: 179 TAVGIGG-DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 V G + G + D L E E+ V++ + A + +F+ K ++K Sbjct: 181 LGVNYGNAADIDGADIYDYLA-----EDLETGVVISYLESMA--DGRRFVAAAEKLAQRK 233 Query: 238 PIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 P++ AGK R H G + G E + M+++GI R R L EL Sbjct: 234 PLLILKAGKGESGQRAAYSHTGRL----AGKYEVFSSIMRQSGI-------REVRDLDEL 282 Query: 297 LGS 299 L + Sbjct: 283 LDA 285 >gi|215489168|ref|YP_002331599.1| FdrA-like protein [Escherichia coli O127:H6 str. E2348/69] gi|312969430|ref|ZP_07783632.1| protein fdrA [Escherichia coli 2362-75] gi|215267240|emb|CAS11689.1| FdrA-like protein [Escherichia coli O127:H6 str. E2348/69] gi|312285977|gb|EFR13895.1| protein fdrA [Escherichia coli 2362-75] Length = 519 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I VP A ++++ + +I+ ++ + + +K + ++GP+C Sbjct: 115 ANLALISVPGDYAAAEAMKALNLGMNVIM-FSDNVSIGQEKSIKTLARERQRIVMGPDC- 172 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG----D 186 G + +G ++ ++G++G++ SGT E + Q G G S A+G GG + Sbjct: 173 GTAIVNGIPLGF--ANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGHDLSE 230 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGE 214 + G + L+ D+ T IV++ + Sbjct: 231 EIGGISMLFALDALAQDDETRVIVLISK 258 >gi|91780610|ref|YP_555817.1| putative CoA ligase [Burkholderia xenovorans LB400] gi|91693270|gb|ABE36467.1| Putative CoA ligase [Burkholderia xenovorans LB400] Length = 708 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 14/150 (9%) Query: 117 LEKSSSRLIGPNCPGILTP-DSCK-IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 L++ L GP+C G++ D + G PG+ GS+G++S+SG + + S Sbjct: 122 LDEHPIALCGPSCLGVVNMIDGFQAFGGHPGTEILPGSIGLVSQSGANVHSYIGAASARN 181 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE---EEAAQFLKDEA 231 LG S V G + G + D ++ FL D T+ + E S++ A Q LK Sbjct: 182 LGFSYVVSSGNE--AGMDATDYIDCFLRDPDTKVVCAYIESFKSSDALIRVAEQALK--- 236 Query: 232 KRGRKKPIVGFVAGKTAPPGR-TMGHAGAV 260 KP++ G++ R + H GA+ Sbjct: 237 ---VSKPLIVIKIGRSPSAVRAALAHTGAM 263 >gi|289805301|ref|ZP_06535930.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 231 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 11/113 (9%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGI 155 ++ ++ + + D +R+K R ++GP+C + ++ +MP +G++G+ Sbjct: 120 VMIFSDNVTLDDEIRLKRRARDKGLLVMGPDCGTAMIANTPLAFANVMP-----EGNIGV 174 Query: 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADE 204 + SGT E Q + G G + A+G+GG V G + L++ ADE Sbjct: 175 IGASGTGIQELCSQIALAGEGITHAIGLGGRDLSAEVGGISALTALDILSADE 227 >gi|163854167|ref|YP_001642210.1| GCN5-related N-acetyltransferase [Methylobacterium extorquens PA1] gi|163665772|gb|ABY33139.1| GCN5-related N-acetyltransferase [Methylobacterium extorquens PA1] Length = 900 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 9/144 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGP+ G+ P + + G + ++S+SGT+ + G+G S + Sbjct: 125 RLIGPDSVGLSVPARGLNASLLARPPKPGDLALISQSGTVASAIAEWGWRHGVGFSAVMT 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVM-VGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G + D L+ F D T +I++ + I +A +FL R KP+V Sbjct: 185 LGRS--ADIDIADCLDHFAEDFHTRAIILSLHHI-----TDARKFLTAARAAARAKPVVV 237 Query: 242 FVAGKTAPPGRT-MGHAGAVISGG 264 G+ PGR H GA+ G Sbjct: 238 LRTGRHDAPGRRPETHTGALARPG 261 >gi|160896824|ref|YP_001562406.1| CoA-binding domain-containing protein [Delftia acidovorans SPH-1] gi|160362408|gb|ABX34021.1| CoA-binding domain protein [Delftia acidovorans SPH-1] Length = 705 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 6/96 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMP----GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RLIGPNC G + P G + R G +G++S+SG A + GLG S Sbjct: 134 RLIGPNCLGFMRPGHQVYATFSPAPGGGLVRPGRIGMVSQSGAFGAYAYSLARERGLGLS 193 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 G + + D L D T+ I+ E Sbjct: 194 LWATTGNE--ADVQLADGLAWLAQDPETDVIMAYME 227 >gi|322371021|ref|ZP_08045574.1| acetyl-CoA synthetase [Haladaptatus paucihalophilus DX253] gi|320549456|gb|EFW91117.1| acetyl-CoA synthetase [Haladaptatus paucihalophilus DX253] Length = 724 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 18/130 (13%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 N P F T+ + E + V+ VP D + + E +P+ + +T G D Sbjct: 66 NRPCFDTIEDVPE--TVDLVVVSVPREYVVDVVRAAGERGVPIALVLTAGFAEAD--ETG 121 Query: 115 ARLEKSSS--------RLIGPNCPGILTPDSCKIGIMPGSIFRK---GSVGILSRSGTLT 163 + LE+ + R++GPNC G++ + + + + RK G +G++S+SG L Sbjct: 122 SELERDLAATAAEVGIRVVGPNCIGVM---AARGATLTSTCSRKPGPGGIGLVSQSGALA 178 Query: 164 YEAVFQTSQE 173 + F+ + + Sbjct: 179 FTTFFERATD 188 >gi|301020347|ref|ZP_07184454.1| membrane protein FdrA [Escherichia coli MS 69-1] gi|300398792|gb|EFJ82330.1| membrane protein FdrA [Escherichia coli MS 69-1] Length = 555 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 17/162 (10%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVG 154 ++ ++ + + D +++K R ++GP+C + I P ++ +G++G Sbjct: 144 VMMFSDNVTLEDEIQLKTRARDKGLLVMGPDC------GTSMIAATPLAFANVMPEGNIG 197 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIV 210 ++ SGT E Q + G + A+G+GG V G + LE+ AD +E + Sbjct: 198 VIGASGTGIQELCSQIALAEEGITHAIGLGGRDLSREVGGISALTALEMLSADAKSEVLA 257 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 V + EA + A + KP V G T R Sbjct: 258 FVSK----PPAEAVRLKIVNAMKATGKPTVALFLGYTPAVAR 295 >gi|84502077|ref|ZP_01000235.1| CoA-binding [Oceanicola batsensis HTCC2597] gi|84390072|gb|EAQ02706.1| CoA-binding [Oceanicola batsensis HTCC2597] Length = 727 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 62/251 (24%), Positives = 102/251 (40%), Gaps = 34/251 (13%) Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGD--AIIESIEAEIPLIVCITEGIPVLDMV 111 +N+P + A++ AA + + G G+ A E+ EAE+ + C G+ L Sbjct: 91 INLPGEMVLDAARDAIAAGTKALMIHSGGFGERGADGEAREAELKAL-CAEAGVAAL--- 146 Query: 112 RVKARLEKSSSRLIGPNCPGILT-PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 GPNC GI++ + +G + ++S+SG++ ++ Sbjct: 147 --------------GPNCLGIMSLTRKASVSSFKAGKLGQGPLALISQSGSVA--SILMQ 190 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + G S G + V E D++ + D T IV E E+ K Sbjct: 191 IAQPFGASLVASTGNEAVTTAE--DLMHHAIEDPDTRIIVGFVEALRRPEQLFGLAWK-- 246 Query: 231 AKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 R KPI+ AG TA G + GH GA+ G E A+ +AGI +A + Sbjct: 247 -ARAAGKPIILLKAGLTAKGGEVSRGHTGAL----AGSGEVYRQALAQAGIVMAEDFEEL 301 Query: 290 GRSLVELLGSL 300 + +VEL +L Sbjct: 302 AQ-MVELFATL 311 >gi|240141627|ref|YP_002966107.1| hypothetical protein MexAM1_META1p5228 [Methylobacterium extorquens AM1] gi|240011604|gb|ACS42830.1| conserved hypothetical protein with putative acyl-CoA synthetase and acetyltransferase domains [Methylobacterium extorquens AM1] Length = 900 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 9/144 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGP+ G+ P + + G + ++S+SGT+ + G+G S + Sbjct: 125 RLIGPDSVGLSVPARGLNASLLARPPKPGDLALISQSGTVASAIAEWGWRHGVGFSAVMT 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVM-VGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G + D L+ F D T +I++ + I +A +FL R KP+V Sbjct: 185 LGRS--ADIDIADCLDHFAEDFHTRAIILSLHHI-----TDARKFLTAARAAARAKPVVV 237 Query: 242 FVAGKTAPPGRT-MGHAGAVISGG 264 G+ PGR H GA+ G Sbjct: 238 LRTGRHDAPGRRPETHTGALARPG 261 >gi|291006756|ref|ZP_06564729.1| acyl-CoA synthetase (NDP forming type) [Saccharopolyspora erythraea NRRL 2338] Length = 904 Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 16/199 (8%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMV 111 ++P F V E E + V+ VP + +V ++ G+ PVL Sbjct: 251 SLPAFADVEELPE--VPDLVVVCVPAEAVPQVAESCGRKGVRALVVVSAGVTSDPVLAHG 308 Query: 112 RVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 V A + + RL+GPNC G++ PD G VG++++SG + + Sbjct: 309 LVDA-VRRWGMRLVGPNCLGVINTDPDVRLDATFTSGCAPAGDVGVITQSGGVGIALLDG 367 Query: 170 TSQEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + GLG S+ V +G V G D+L + DE T V+ E G+ +F Sbjct: 368 LAACGLGVSSVVSVGDKYDVSGN---DMLLWWQRDERTRLAVVYLESFGNPR----KFSW 420 Query: 229 DEAKRGRKKPIVGFVAGKT 247 + R KP++ +G + Sbjct: 421 LSRRMARGKPVIVLKSGAS 439 >gi|254564134|ref|YP_003071229.1| hypothetical protein METDI5826 [Methylobacterium extorquens DM4] gi|254271412|emb|CAX27425.1| conserved hypothetical protein; putative acyl-CoA synthetase and acetyltransferase domains [Methylobacterium extorquens DM4] Length = 900 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 9/144 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGP+ G+ P + + G + ++S+SGT+ + G+G S + Sbjct: 125 RLIGPDSVGLSVPARGLNASLLARPPKPGDLALISQSGTVASAIAEWGWRHGVGFSAVMT 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVM-VGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G + D L+ F D T +I++ + I +A +FL R KP+V Sbjct: 185 LGRS--ADIDIADCLDHFAEDFHTRAIILSLHHI-----TDARKFLTAARAAARAKPVVV 237 Query: 242 FVAGKTAPPGRT-MGHAGAVISGG 264 G+ PGR H GA+ G Sbjct: 238 LRTGRHDAPGRRPETHTGALARPG 261 >gi|296109612|ref|YP_003616561.1| CoA-binding domain protein [Methanocaldococcus infernus ME] gi|295434426|gb|ADG13597.1| CoA-binding domain protein [Methanocaldococcus infernus ME] Length = 667 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 10/151 (6%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQT 170 +V+ L+K + R IGPNC G++ + +F KG++ ++S+SG + + Sbjct: 105 KVRGILKKYNIRAIGPNCFGLINA-HINLNATFSKVFPEKGNISLISQSGAVIDAILDIL 163 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 +G S V +G + D+LE+ DE T I + E S +++ FLK Sbjct: 164 PLLNIGVSKVVSLGNKI--DIQESDILEILKDDEETRVIGIYLE---SLKDK--NFLKVA 216 Query: 231 AKRGRKKPIVGFVAGKTAPPGR-TMGHAGAV 260 + +KKPI+ AGK+ R H GA+ Sbjct: 217 KEVAKKKPIIVLKAGKSEAGKRAAKSHTGAL 247 >gi|300784326|ref|YP_003764617.1| acetyl-CoA synthetase [Amycolatopsis mediterranei U32] gi|299793840|gb|ADJ44215.1| acetyl-CoA synthetase [Amycolatopsis mediterranei U32] Length = 893 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 18/133 (13%) Query: 123 RLIGPNCPGILTP------DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 R++GPN G+L ++ +PG +G G +SG L + GLG Sbjct: 319 RVVGPNALGVLNTAPGIRLNATLAPRLPG----RGRTGFFCQSGALGTAILADAEARGLG 374 Query: 177 QSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 ST V G V G D+L+ + D T+ +++ E G+ +F + + R Sbjct: 375 LSTFVSAGNRADVSGN---DLLQYWETDPDTDLVLLYLESFGNPR----KFARLARRLAR 427 Query: 236 KKPIVGFVAGKTA 248 KPIV +G+ A Sbjct: 428 TKPIVAVKSGRHA 440 >gi|218533112|ref|YP_002423928.1| GCN5-related N-acetyltransferase [Methylobacterium chloromethanicum CM4] gi|218525415|gb|ACK86000.1| GCN5-related N-acetyltransferase [Methylobacterium chloromethanicum CM4] Length = 900 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 9/144 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGP+ G+ P + + G + ++S+SGT+ + G+G S + Sbjct: 125 RLIGPDSVGLSVPARGLNASLLARPPKPGDLALISQSGTVASAIAEWGWRHGVGFSAVMT 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVM-VGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G + D L+ F D T +I++ + I +A +FL R KP+V Sbjct: 185 LGRS--ADIDIADCLDHFAEDFHTRAIILSLHHI-----TDARKFLTAARAAARAKPVVV 237 Query: 242 FVAGKTAPPGRT-MGHAGAVISGG 264 G+ PGR H GA+ G Sbjct: 238 LRTGRHDAPGRRPETHTGALARPG 261 >gi|284031391|ref|YP_003381322.1| CoA-binding domain-containing protein [Kribbella flavida DSM 17836] gi|283810684|gb|ADB32523.1| CoA-binding domain protein [Kribbella flavida DSM 17836] Length = 941 Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 18/131 (13%) Query: 123 RLIGPNCPGILTP------DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 R+IGPN G++ ++ +MP +G V +SG L + + GLG Sbjct: 367 RVIGPNALGVINTAPGVQLNATLSPLMPS----RGRVAFFCQSGALGVSILADIAGRGLG 422 Query: 177 QSTAVGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 S+ V G V G D+++ + +DEATE +++ E G+ +F + + Sbjct: 423 LSSFVSAGNRADVSGN---DLMQYWYSDEATEVVLLYLESLGNPR----KFSRVARRLAG 475 Query: 236 KKPIVGFVAGK 246 +KP+V +G+ Sbjct: 476 RKPVVALKSGR 486 >gi|91778208|ref|YP_553416.1| putative acyl-CoA synthetase [Burkholderia xenovorans LB400] gi|91690868|gb|ABE34066.1| Putative acyl-CoA synthetase [Burkholderia xenovorans LB400] Length = 709 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 7/92 (7%) Query: 123 RLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RLIGPNC G+++ +C ++ + +G++S+SG L + G+G S Sbjct: 134 RLIGPNCLGLISAANRLAACSSPVLEIPELPQQPIGLVSQSGALMTTFFDRAWSHGIGFS 193 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 + +G E D +E FLAD+ ++ Sbjct: 194 HGISVGNQ--ADLELADFVE-FLADDPDTQVI 222 >gi|326345932|gb|EGD69671.1| Protein fdrA [Escherichia coli O157:H7 str. 1125] Length = 552 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 21/189 (11%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I V A + ++++ + +++ ++ + + D +++K R + ++GP+C Sbjct: 118 ANLALISVAGEYAAELANQALDRNLNVMM-FSDNVTLEDEIQLKTRAREKGLLVMGPDCG 176 Query: 131 GIL---TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + TP + +MP +G++G SGT E Q + G G + A+G+GG Sbjct: 177 TSMIAGTPLAFA-NVMP-----EGNIGA---SGTGIQELCSQIALAGEGITHAIGLGGRD 227 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 V G + LE+ ADE +E + V + EA + A + KP V Sbjct: 228 LSREVGGISALTALEMLSADEKSEVLAFVSK----PLAEAVRLKIVNAMKATGKPTVALF 283 Query: 244 AGKTAPPGR 252 G T R Sbjct: 284 LGYTPAVAR 292 >gi|301059594|ref|ZP_07200506.1| CoA binding domain protein [delta proteobacterium NaphS2] gi|300446359|gb|EFK10212.1| CoA binding domain protein [delta proteobacterium NaphS2] Length = 493 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 15/166 (9%) Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +++GPNC G+ P +P G VG+ S+SG+ + S LG STA Sbjct: 132 KILGPNCLGVANPHQKINTTFVPNE-GDPGFVGLSSQSGSFVTQMFEYLSGFNLGFSTAF 190 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G + V + +D + A T+ I + E F+K KPIV Sbjct: 191 SVGNEAV--LDIVDCMAYLGACPHTKVIALYIE----GIRRGDDFMKVARAIVPHKPIVA 244 Query: 242 F-VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM-KEAGICIAPS 285 F V G A H GA+ G ++ + M ++AGI A S Sbjct: 245 FYVGGSKAGKAAGFSHTGAM-----AGPDELYDGMFRQAGIIRAAS 285 >gi|126738923|ref|ZP_01754619.1| predicted Acetyl-CoA synthetase [Roseobacter sp. SK209-2-6] gi|126720104|gb|EBA16811.1| predicted Acetyl-CoA synthetase [Roseobacter sp. SK209-2-6] Length = 714 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 10/127 (7%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE-GLGQSTAV 181 RL+GPN G+ + + ++ G++GI S+SG + V + + G+G S+ V Sbjct: 127 RLVGPNTNGVFNLHN-NMNMVGVQDVEPGNIGICSQSGNMMLAFVTEAKRRGGVGFSSYV 185 Query: 182 GIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 G+G V +E+ L+ F D T++ V E + FL + ++KP++ Sbjct: 186 GVGNQLDVTLSEY---LQYFADDADTKAPVFYVE----GFRDGRAFLDTCREVTQRKPVI 238 Query: 241 GFVAGKT 247 + +G+T Sbjct: 239 IYKSGRT 245 >gi|302525554|ref|ZP_07277896.1| acetyl-CoA synthetase [Streptomyces sp. AA4] gi|302434449|gb|EFL06265.1| acetyl-CoA synthetase [Streptomyces sp. AA4] Length = 947 Score = 37.4 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 10/129 (7%) Query: 123 RLIGPNCPGIL-TPDSCKI-GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R++GPN G+L T ++ + + ++G G +SG L + GLG ST Sbjct: 374 RVVGPNALGVLNTAKDVRLNATLAPRLPKRGRTGFFCQSGALGTAILADAGSRGLGLSTF 433 Query: 181 VGIGGDP-VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V G V G D+L+ + D T+ +++ E G+ +F + + R KPI Sbjct: 434 VSAGNRADVSGN---DLLQYWETDPDTDLVLLYLESFGNPR----KFARLARRLARSKPI 486 Query: 240 VGFVAGKTA 248 V +G+ A Sbjct: 487 VAVKSGRHA 495 >gi|300712376|ref|YP_003738190.1| acetyl-CoA synthetase [Halalkalicoccus jeotgali B3] gi|299126059|gb|ADJ16398.1| acetyl-CoA synthetase [Halalkalicoccus jeotgali B3] Length = 695 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 17/166 (10%) Query: 124 LIGPNCPGILTPDSCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 L+GPN GI+ S +G+ P +G++ +S+SG + + +G+G + Sbjct: 125 LVGPNSLGIM---STSVGLNATFGPDDAL-EGNLSFMSQSGAFITAVIDWANDQGIGFND 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V +G V + D +E + D+ T+ V++G + G EE +F++ + R P+ Sbjct: 181 VVSLGNKAV--LDEADFVEAWNEDDGTD--VVIGYLEGI--EEGREFIETAREVTRDTPV 234 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 V +G+T + I+G + E + +AG+ A S Sbjct: 235 VLVKSGRTDAGAQAASSHTGTIAGSERAYE---AGLAQAGVLRAES 277 >gi|170739807|ref|YP_001768462.1| CoA-binding domain-containing protein [Methylobacterium sp. 4-46] gi|168194081|gb|ACA16028.1| CoA-binding domain protein [Methylobacterium sp. 4-46] Length = 722 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 26/185 (14%) Query: 118 EKSSSRLIGPNCPGI--LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 + + RL+GPN G + C P + +G + S+SG + + + + Sbjct: 382 RRYNIRLMGPNIYGFYYMAKSLCATFCTPFDV--QGQAALSSQSGGIGMAIIGFSRSTKM 439 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S VG+G + D+L F D++T I E ++ F + + + Sbjct: 440 GVSAIVGLGNK--SDIDEDDLLTFFEQDDSTRVIAQHCE----DLKDGRSFAEAARRVSK 493 Query: 236 KKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARIGRS 292 KKP++ AG+T+ R H GA+ DKI + K+ G+ A RS Sbjct: 494 KKPVIVLKAGRTSAGARAASSHTGAL------AGNDKIYEDVFKQCGVIRA-------RS 540 Query: 293 LVELL 297 L +LL Sbjct: 541 LRQLL 545 >gi|218690701|ref|YP_002398913.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli ED1a] gi|218428265|emb|CAR09184.2| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli ED1a] Length = 886 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 14/160 (8%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSR 158 CI P ++A + + R +GPN G+L P P I ++G + +S+ Sbjct: 97 CIILSAPASQHEDLRACALRHNMRQLGPNSLGLLAPWQGLNASFSPVPI-KRGKLAFISQ 155 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLA-DEATESIVMVGEI 215 S ++ + Q +G S + + GD + IDV EL +LA D T +I++ E Sbjct: 156 SAAVSNTILDWAQQREMGFSYFIAL-GDSLD----IDVDELLDYLARDSKTSAILLYLE- 209 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +A +F+ R KPI+ +G++ R + Sbjct: 210 ---QLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLN 246 >gi|326796806|ref|YP_004314626.1| GCN5-related N-acetyltransferase [Marinomonas mediterranea MMB-1] gi|326547570|gb|ADZ92790.1| GCN5-related N-acetyltransferase [Marinomonas mediterranea MMB-1] Length = 812 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 18/124 (14%) Query: 100 CITEGIPVLDMV--------RVKARLEKSSSRLIGPNCPGILTPD---SCKIGIM-PGSI 147 C GI L M+ ++ L + + RL+GPN G+ TP + +G+ P S Sbjct: 102 CSEAGINALLMLTWVPDSPAHIQRLLRRYNMRLLGPNSFGVCTPSRGFNAWLGLTSPIS- 160 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 G + +LS+SGT+ V + +G+G S V G P+ V++ D T+ Sbjct: 161 ---GRLALLSQSGTIASAVVDWATWQGIGFSHVVATGT-PIDVMPH-QVMDYLSNDFQTQ 215 Query: 208 SIVM 211 SI+M Sbjct: 216 SILM 219 >gi|78044289|ref|YP_359136.1| acetyl-CoA synthase [Carboxydothermus hydrogenoformans Z-2901] gi|77996404|gb|ABB15303.1| acetyl-CoA synthase [Carboxydothermus hydrogenoformans Z-2901] Length = 716 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 7/138 (5%) Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPNC GI+ + + KG + +S+SG + + + +E LG S + + Sbjct: 138 VLGPNCVGIVNNNLQLNATFLRTAPLKGEIAFVSQSGAILSTVLEWSLKEDLGFSYMISM 197 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G V D L D T I++ E E + FLK + KP+V F Sbjct: 198 GNKAVLNEA--DFLPAIANDPGTAVILLYIE----DVVEGSSFLKKAYEASLLKPVVVFK 251 Query: 244 AG-KTAPPGRTMGHAGAV 260 AG TA H GA+ Sbjct: 252 AGISTAGAKAASSHTGAL 269 >gi|269980470|gb|ACZ56342.1| putative acyl-CoA synthetase [Mycobacterium chubuense NBB4] Length = 663 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 12/143 (8%) Query: 122 SRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL--GQS 178 +R+IGPNC G+ + I G G V ++S++GT A + L G+ Sbjct: 109 ARVIGPNCFGLQDCNRRLNASISAGLPLGGGDVSLVSQAGTYAMAAATHSYDARLRIGKV 168 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 A+G D + +E + L D TE++ E + +A F+++ + KP Sbjct: 169 IALGNTSD-ISASELVAELR---NDPETETLCFALE----SLPDARAFVEEVERTTPSKP 220 Query: 239 IVGFVAGKTAPPGRTMG-HAGAV 260 ++ + AGKT RT H GA+ Sbjct: 221 VIVYKAGKTDAGARTAASHTGAL 243 >gi|94314286|ref|YP_587495.1| putative acyl-CoA synthetase [Cupriavidus metallidurans CH34] gi|93358138|gb|ABF12226.1| putative Acyl-CoA synthetase [Cupriavidus metallidurans CH34] Length = 715 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 8/97 (8%) Query: 123 RLIGPNCPGILTPDSCKI----GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RL+GPN G++ S + ++ +G V ++S+SG++ + + + GLG + Sbjct: 143 RLLGPNSIGVVDVHSGAVLSVNAVLEMDTLHRGPVSVISQSGSMLGALLSRGAARGLGFA 202 Query: 179 TAVGIGGDPVKGT-EFIDVLELFLADEATESIVMVGE 214 V +G + G E +D L + D ATE I++ E Sbjct: 203 KLVSVGNESDIGVGELVD---LLVDDAATEVILLFLE 236 >gi|332158036|ref|YP_004423315.1| succinyl-coa synthetase alpha chain related protein [Pyrococcus sp. NA2] gi|331033499|gb|AEC51311.1| succinyl-coa synthetase alpha chain related protein [Pyrococcus sp. NA2] Length = 487 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 10/129 (7%) Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIFRK---GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R+IGPNC G+ PD+ +P + G + +S+SG + + G+G Sbjct: 151 RVIGPNCVGVYAPDTGVDTVFLPEEKMDRPPSGPIAFISQSGAFAAAMLDWAAMAGIGIG 210 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V G + D++E F D+ + VM I G ++ +F++ + + KP Sbjct: 211 KMVSYGNK--IDVDDADLMEYFANDDQIK--VMTFYIEGV--KDGRKFMETAKRVTKIKP 264 Query: 239 IVGFVAGKT 247 ++ +G++ Sbjct: 265 VIALKSGRS 273 >gi|295395840|ref|ZP_06806028.1| GNAT family acetyltransferase [Brevibacterium mcbrellneri ATCC 49030] gi|294971375|gb|EFG47262.1| GNAT family acetyltransferase [Brevibacterium mcbrellneri ATCC 49030] Length = 901 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 20/169 (11%) Query: 123 RLIGPNCPGIL-TPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R++GPN GI T + F G +G+ S+SG L + GLG ST Sbjct: 313 RVVGPNSFGIANTSTDVALNASLSPFFPEPGPLGLFSQSGALGTGLLAAAKSRGLGISTF 372 Query: 181 VGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V G + G D+L+ + DE+T+ + + E G+ +F + + R+KP+ Sbjct: 373 VSAGNRADLSGN---DLLQFWEEDESTQIVGLYLESIGNPR----KFARIARRVARQKPV 425 Query: 240 V---GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + + G+ PPG + +S G A +++ + +AG+ A S Sbjct: 426 IVIKSDLTGRELPPGHQVR-----VSSLSGSALNQV--LTQAGVIRADS 467 >gi|15921831|ref|NP_377500.1| hypothetical protein ST1537 [Sulfolobus tokodaii str. 7] gi|15622618|dbj|BAB66609.1| 659aa long conserved hypothetical protein [Sulfolobus tokodaii str. 7] Length = 659 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 14/179 (7%) Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGPNCP 130 VI VP + E++E + + IT G + ++ ++ K R++GPN Sbjct: 70 VITVPREAVPQVMEEAVEKNVKAAIVITAGFKEVGEAELEDKVISIARKGGIRVLGPNTF 129 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD-PVK 189 GI+TP+ + ++G++ ++ +SG L + + +G S V +G VK Sbjct: 130 GIITPEFN--ATFAYTDVKRGNIALVVQSGGLGVYMLNWAQKYRVGISYMVSLGNQADVK 187 Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 E V+E D T +I + E G S + FL+ + ++KP+V G T+ Sbjct: 188 EYE---VIEYLSRDPETRAIFVYLE-GVS---DGNSFLETLPEATKRKPVVFLKGGTTS 239 >gi|260906704|ref|ZP_05915026.1| CoA-binding domain protein [Brevibacterium linens BL2] Length = 890 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 27/197 (13%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL--DMVRVKARLEKSSS----RL 124 A+ +VI VP A + + E + ++ I+ G + ++ R+ +S R+ Sbjct: 255 ADLAVIAVPAESATEVVQECAAHGVKAVLVISSGFAETGDEGAELQRRMVATSRAYGMRV 314 Query: 125 IGPNCPGILTP------DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +GPN G++ ++ +P S GS+G+ S+SG L + GLG S Sbjct: 315 VGPNSFGLVNEAADVSLNASLAPFLPDS----GSLGLFSQSGALGTALLSAAKNRGLGIS 370 Query: 179 TAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 T V G + G DVL+ + D T+++ + E G+ +F + + R K Sbjct: 371 TFVSAGNRADMSGN---DVLQYWEEDPDTKTVGLYLESIGNPR----KFSRIARRVSRVK 423 Query: 238 PIV---GFVAGKTAPPG 251 PI+ + G+ PPG Sbjct: 424 PIIVIKSDLTGRELPPG 440 >gi|312883380|ref|ZP_07743106.1| Acyl-CoA synthetase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368996|gb|EFP96522.1| Acyl-CoA synthetase [Vibrio caribbenthicus ATCC BAA-2122] Length = 892 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 6/125 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP+ GI+ P S + KG + +S+SG + + +G ST V Sbjct: 126 RILGPDSLGIIVPWSNFNASLSPIDAHKGKLAFVSQSGAICTTVLDWAYDRDIGFSTFVS 185 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + D+L+ D TE+I++ + + ++A +F+ R K I+ Sbjct: 186 LGSS--LDIQVADLLDFLANDSHTEAILIYLD----SIDDARRFMSAARAASRNKRILVL 239 Query: 243 VAGKT 247 G++ Sbjct: 240 KGGRS 244 >gi|156740102|ref|YP_001430231.1| acetyl coenzyme A synthetase subunit alpha [Roseiflexus castenholzii DSM 13941] gi|156231430|gb|ABU56213.1| Acetyl coenzyme A synthetase (ADP forming) alpha domain [Roseiflexus castenholzii DSM 13941] Length = 698 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 38/181 (20%), Positives = 76/181 (41%), Gaps = 15/181 (8%) Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 +++ R+IGPNC GI+ + G + +S+SG L + + +G+G Sbjct: 118 VQRYGMRMIGPNCLGIIDTITRLNASFAALYPHPGQIAFMSQSGALCTAILDWSKAQGIG 177 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S V +G + + +LE + D+A +++ + G +A F+ + ++ Sbjct: 178 FSRFVSLGNK--ADVDEVTLLEAWGCDQANNRVIL-AYLEGIGNGDA--FVAVARRVTKR 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 P++ +G T R ++G + E A ++G+ A RS+ EL Sbjct: 233 IPVIAIKSGATQAGARAASSHTGALAGAEHACE---AAFDQSGVLRA-------RSMQEL 282 Query: 297 L 297 Sbjct: 283 F 283 >gi|323700569|ref|ZP_08112481.1| CoA-binding domain protein [Desulfovibrio sp. ND132] gi|323460501|gb|EGB16366.1| CoA-binding domain protein [Desulfovibrio desulfuricans ND132] Length = 701 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 14/134 (10%) Query: 113 VKARLEKSSSRLIGPNCPGILT----PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 +KA E+ L+GPNC G++ ++ +PG GS+ S+SG L + Sbjct: 119 LKALCEEYRISLLGPNCLGMINGAAGVNASFAAGLPGL----GSIAFFSQSGALCVAILD 174 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 +G S V +G V + D+L+ DEAT V++G I EA FL+ Sbjct: 175 WAMGANIGFSKFVSLGNKAV--LDEADMLDYLNRDEATR--VILGYIENVEHGEA--FLR 228 Query: 229 DEAKRGRKKPIVGF 242 + + KP++ Sbjct: 229 EARRASLNKPVIMI 242 >gi|227356562|ref|ZP_03840949.1| protein FdrA (multicopy suppressor of dominant negative ftsH mutants) [Proteus mirabilis ATCC 29906] gi|227163318|gb|EEI48245.1| protein FdrA (multicopy suppressor of dominant negative ftsH mutants) [Proteus mirabilis ATCC 29906] Length = 555 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 11/154 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILS 157 ++ ++ + + D +K + + ++GP+C T + + +I KGS+GI+ Sbjct: 144 VMLFSDNVSIADEKALKEKAAANGLIVMGPDCG---TANIAGAPLAFANIAPKGSIGIVG 200 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVG 213 SGT E Q + G S A+G+GG + + G I + + AD T I V Sbjct: 201 ASGTGIQEITSQIVLQRQGVSHAIGLGGRDLSEQIGGISAITAINMLAADPQTRVIAFVS 260 Query: 214 EIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + A E + E KR KPIV G T Sbjct: 261 KPPAPAVREK---IIAEMKR-HNKPIVAQFLGTT 290 >gi|282163119|ref|YP_003355504.1| acetyl-CoA synthetase alpha subunit [Methanocella paludicola SANAE] gi|282155433|dbj|BAI60521.1| acetyl-CoA synthetase alpha subunit [Methanocella paludicola SANAE] Length = 458 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 17/195 (8%) Query: 74 SVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL--DMVRVKARLEKSSS----RLIGP 127 ++I VP S A + E ++ + IT G + D ++ +L++ ++ R++GP Sbjct: 73 AIIIVPASAALQVVDECGAKKVKALCVITAGFSEVGPDGAVLEEKLKQKAASYGMRMLGP 132 Query: 128 NCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 N G + S I+P + KG + +++SG L V LG + V G Sbjct: 133 NTMGFVNNSISLNASIVP-RMPPKGEISFITQSGALGLSLVDWAIGSNLGMNCVVSTGNK 191 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 D+LE F D+ T +I M E ++ +F+ EA R KK + AG Sbjct: 192 --ADVSEADLLEFFEQDKGTWTIAMYIE----GLKDGRKFM--EAARKVKKAKLAIKAGV 243 Query: 247 TAPPGRTMG-HAGAV 260 + R H G++ Sbjct: 244 SQAGARAAASHTGSL 258 >gi|119470555|ref|ZP_01613258.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding protein [Alteromonadales bacterium TW-7] gi|119446256|gb|EAW27533.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding protein [Alteromonadales bacterium TW-7] Length = 889 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 13/184 (7%) Query: 99 VCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSR 158 + I +G+ +KA K + L+GPN G+L P ++ G + +S+ Sbjct: 98 IIIADGLTNDQKSALKACAHKHNVTLLGPNSLGLLIPHIGLNASFSHTVASPGKIAFVSQ 157 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM-VGEIGG 217 S + + + +G S V +GG +F ++L+ D T++I++ + I Sbjct: 158 SAAVCSTILDWAKNKDIGFSYFVSVGG--CLDIDFDELLDFLGRDSKTKAILLYIDNI-- 213 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM-K 276 E+ F+ KP++ GKT A + SGGK ++ +A+ + Sbjct: 214 ---EDIRGFISAARAAAFSKPVIAIKTGKT----NAGALAAEIHSGGKQSSDAVYDALFQ 266 Query: 277 EAGI 280 AG+ Sbjct: 267 RAGM 270 >gi|326317896|ref|YP_004235568.1| CoA-binding domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374732|gb|ADX47001.1| CoA-binding domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 702 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 24/175 (13%) Query: 121 SSRLIGPNCPG--------ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 S R++GPN G +L+P G + F GS+G++S+SG + + + + Sbjct: 123 SMRILGPNTIGLVNLTDGIVLSPS----GALEMDEFPVGSIGVVSQSGGILGSLLSRAAA 178 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+G S V + E D ++ D AT+ I + E A+F K Sbjct: 179 RGIGLSKLVATSNE--VDLELADFIDHLADDPATQVIALYIET----VRHPARFRAACLK 232 Query: 233 RGRK-KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM-KEAGICIAPS 285 R KP+V F G++ A +G GA+ +A+ ++AG+ A S Sbjct: 233 AARAGKPVVAFKIGRS----EAGAQAAVSHTGAMAGADRMYDALFRQAGVIRAKS 283 >gi|197286048|ref|YP_002151920.1| membrane protein FdrA [Proteus mirabilis HI4320] gi|194683535|emb|CAR44382.1| protein FdrA (multicopy suppressor of dominant negative ftsH mutants) [Proteus mirabilis HI4320] Length = 555 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 11/154 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILS 157 ++ ++ + + D +K + + ++GP+C T + + +I KGS+GI+ Sbjct: 144 VMLFSDNVSIADEKALKEKAAANGLIVMGPDCG---TANIAGAPLAFANIAPKGSIGIVG 200 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVG 213 SGT E Q + G S A+G+GG + + G I + + AD T I V Sbjct: 201 ASGTGIQEITSQIVLQRQGVSHAIGLGGRDLSEQIGGISAITAINMLAADPQTRVIAFVS 260 Query: 214 EIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + A E + E KR KPIV G T Sbjct: 261 KPPAPAVREK---IIAEMKR-HNKPIVAQFLGTT 290 >gi|116748154|ref|YP_844841.1| CoA-binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116697218|gb|ABK16406.1| CoA-binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 682 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 10/149 (6%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSR 123 A + + I VP + + + E IP ++ + G L +V+ LE R Sbjct: 64 AIDLATILVPAPAVPEVLRQCGEKGIPRVIVQSAGFRELGEERLELEGKVRDLLEHYRMR 123 Query: 124 LIGPNCPGILTPDS-CKIGIMP-GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +IGPNC G++ + + P + G + I+S+SG + V E LG S Sbjct: 124 MIGPNCLGVINRRTGLAVPFFPLAANVGAGPISIISQSGGVGAMMVNLLEAENLGLSRFA 183 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIV 210 + G+ + +E D+LE F D TE I+ Sbjct: 184 SV-GNKLDVSEN-DLLEYFARDPETEMIL 210 >gi|167045555|gb|ABZ10205.1| hypothetical protein ALOHA_HF4000APKG10I20ctg1g1 [uncultured marine crenarchaeote HF4000_APKG10I20] Length = 301 Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 27/173 (15%) Query: 119 KSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 K R+IGPNC G+ D G R G+V S+SGT+ + G Sbjct: 70 KHKIRVIGPNCIGMFNAANRLDCAFQGQARMVRARLGNVAFFSQSGTMGISMLESADSFG 129 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFL---ADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 L + + G D +D ++ L +D T+ I + E G + +F+ + A Sbjct: 130 LSKMISYGNRSD-------VDEADMILYAGSDPQTKVICLYVEGFG----DGRKFI-NTA 177 Query: 232 KR---GRKKPIVGFVAGKTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGI 280 KR +KKPIV + +G++A + H G++ G E + A K+AGI Sbjct: 178 KRVMKEKKKPIVIWKSGRSAAGAKQAASHTGSL----GGDHEHLMGAFKQAGI 226 >gi|222478754|ref|YP_002564991.1| CoA-binding domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222451656|gb|ACM55921.1| CoA-binding domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 704 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 16/180 (8%) Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVL--DMVRVKARL----EKSSSRLIGPNCP 130 VPPS DAI EA + +V IT G D + RL ++ L+GPN Sbjct: 71 VVPPSIVLDAIEACGEAGVRNVVVITAGFGETGEDGAARERRLAEIADEYDLNLVGPNSL 130 Query: 131 GIL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV- 188 GI+ TP P + G + +S+SG + + G+G V +G V Sbjct: 131 GIMSTPSGMNATFGPENAL-PGGLSFMSQSGAFVTAVLDWANDNGIGFKDVVSLGNKAVL 189 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 T+F+D + DE T+ V++G + G E+ +F++ + + PIV +G+T+ Sbjct: 190 DETDFVD---HWGNDEETD--VIIGYLEGI--EDGREFIEAARETTQDTPIVAVKSGRTS 242 >gi|21244794|ref|NP_644376.1| hypothetical protein XAC4077 [Xanthomonas axonopodis pv. citri str. 306] gi|21110493|gb|AAM38912.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 902 Score = 37.0 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP+C G++ P + + + G + ++S S + V +G S V Sbjct: 125 RILGPHCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVS 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G +F D+L+ F D T +I++ E G +A +F+ R KP+V Sbjct: 185 LGD--TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVV 238 Query: 243 VAGK 246 +G+ Sbjct: 239 KSGR 242 >gi|283788560|ref|YP_003368425.1| FdrA protein [Citrobacter rodentium ICC168] gi|282952014|emb|CBG91743.1| FdrA protein [Citrobacter rodentium ICC168] Length = 553 Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust. Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 7/121 (5%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILS 157 ++ ++ +P+ V +K + ++GP+C + S + ++ +G +G++ Sbjct: 144 VMLFSDNVPLAQEVELKTLAHERGLIVMGPDCGTAMIAGS---PLAFANVLPEGGIGVIG 200 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVG 213 SGT E Q + G S A+G+GG V G + L++ D+AT+ I V Sbjct: 201 ASGTGIQEMTSQIALHQQGISHAIGLGGRDLCAEVGGISALTALDMLACDDATQVIAFVS 260 Query: 214 E 214 + Sbjct: 261 K 261 >gi|296534085|ref|ZP_06896592.1| 6-carboxyhexanoate-CoA ligase [Roseomonas cervicalis ATCC 49957] gi|296265581|gb|EFH11699.1| 6-carboxyhexanoate-CoA ligase [Roseomonas cervicalis ATCC 49957] Length = 711 Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 53/141 (37%), Gaps = 9/141 (6%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAV 167 R+ A RL+GPNC G+ + G S+ R G +GI S+SG Sbjct: 128 RMVAAARAHGMRLLGPNCLGLFNARTGFYGTFTSSLERGTPKPGPIGIASQSGAYGMHLF 187 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 GLG S V G + ++ D TE I E AE A Sbjct: 188 GLARDHGLGLSCVVTTGNE--ADLNVGHMIGWMAQDPDTEVIAAYAEGIRDAESFLAAL- 244 Query: 228 KDEAKRGRKKPIVGFVAGKTA 248 E R +KP+V G++A Sbjct: 245 --ELARRNRKPVVMMKVGRSA 263 >gi|326332439|ref|ZP_08198715.1| acetyltransferase, GNAT family [Nocardioidaceae bacterium Broad-1] gi|325949752|gb|EGD41816.1| acetyltransferase, GNAT family [Nocardioidaceae bacterium Broad-1] Length = 763 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 19/167 (11%) Query: 120 SSSRLIGPNCPGILTPD---SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S R++GPNC G+ D P S R G V ++++SG + A+ + + G+G Sbjct: 164 SGMRVVGPNCLGVANTDPDVRLDATFSPMSAGR-GRVAMMTQSGAVGIAALQRAEELGVG 222 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S + G D+L D AT+ + + E G+ +F + + Sbjct: 223 LSAFISSGNK--ADVSCNDLLMYAAEDHATDVVALYLESFGNPR----KFSRLARRLSAD 276 Query: 237 KPIVGFVAGKTAPPGR--TMGHAGAVISGGKGGAEDKINAM-KEAGI 280 KP+V V G + GR +GH + ++ D ++A+ ++ G+ Sbjct: 277 KPVVALVGGSSH-AGRQGALGHTASAVTSA-----DAVDALFRQCGV 317 >gi|294625678|ref|ZP_06704300.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600047|gb|EFF44162.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 902 Score = 37.0 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP+C G++ P + + + G + ++S S + V +G S V Sbjct: 125 RILGPHCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVS 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G +F D+L+ F D T +I++ E G +A +F+ R KP+V Sbjct: 185 LGD--TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVV 238 Query: 243 VAGK 246 +G+ Sbjct: 239 KSGR 242 >gi|188578925|ref|YP_001915854.1| acetyltransferase, gnat family [Xanthomonas oryzae pv. oryzae PXO99A] gi|188523377|gb|ACD61322.1| acetyltransferase, gnat family [Xanthomonas oryzae pv. oryzae PXO99A] Length = 902 Score = 37.0 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP+C G++ P + + + G + ++S S + V +G S V Sbjct: 125 RILGPHCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVS 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G +F D+L+ F D T +I++ E G +A +F+ R KP+V Sbjct: 185 LGD--TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVV 238 Query: 243 VAGK 246 +G+ Sbjct: 239 KSGR 242 >gi|166710314|ref|ZP_02241521.1| hypothetical protein Xoryp_02235 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 902 Score = 37.0 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP+C G++ P + + + G + ++S S + V +G S V Sbjct: 125 RILGPHCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVS 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G +F D+L+ F D T +I++ E G +A +F+ R KP+V Sbjct: 185 LGD--TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVV 238 Query: 243 VAGK 246 +G+ Sbjct: 239 KSGR 242 >gi|218782513|ref|YP_002433831.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218763897|gb|ACL06363.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 464 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 66/170 (38%), Gaps = 11/170 (6%) Query: 96 PLIVCITEGIPVLDMVRVKARL----EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 P + T G + + ++ L S+ RL+GPNC G+L +S M KG Sbjct: 92 PFVHFFTSGFSEVGNMELEKELVETARASNVRLVGPNCIGVLCAESRITFNMEFKPNGKG 151 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 +VG L +SG ++ V + + + AV G E D L F D E+ + Sbjct: 152 NVGFLGQSGGVSDNFVRMSGSRKIRLNKAVSYGNQADLKLE--DFLAYFAEDPEIEAAAI 209 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG-HAGAV 260 E + FL K KP++ G T + H GA+ Sbjct: 210 YVE----DVKNGPAFLDALGKTTASKPVILLKGGSTQRGAKAAASHTGAM 255 >gi|306815119|ref|ZP_07449272.1| Putative enzyme, Putative Succinyl-CoA synthetase, alpha subunit [Escherichia coli NC101] gi|305851488|gb|EFM51942.1| Putative enzyme, Putative Succinyl-CoA synthetase, alpha subunit [Escherichia coli NC101] Length = 519 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 32/148 (21%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I VP A ++++ + +++ ++ + + +K + ++GP+C Sbjct: 115 ANLALISVPGDYAAAEAMKALNLGMNVMM-FSDNVSIGQEKSIKTLARERQRIVMGPDC- 172 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG----D 186 G + +G ++ ++G++G++ SGT E + Q G G S A+G GG + Sbjct: 173 GTAIVNGIPLGF--ANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGHDLSE 230 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGE 214 + G + L+ D+ T IV++ + Sbjct: 231 EIGGISMLFALDALAQDDETRVIVLISK 258 >gi|58580095|ref|YP_199111.1| hypothetical protein XOO0472 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58424689|gb|AAW73726.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 902 Score = 37.0 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP+C G++ P + + + G + ++S S + V +G S V Sbjct: 125 RILGPHCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVS 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G +F D+L+ F D T +I++ E G +A +F+ R KP+V Sbjct: 185 LGD--TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVV 238 Query: 243 VAGK 246 +G+ Sbjct: 239 KSGR 242 >gi|317492587|ref|ZP_07951014.1| FdrA protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919337|gb|EFV40669.1| FdrA protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 516 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 45/194 (23%), Positives = 93/194 (47%), Gaps = 12/194 (6%) Query: 60 TTVAEAKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 T++ A+E+ A+ N ++I VP A ++++E + +++ ++ + + ++K + Sbjct: 100 TSLQMAQEQNASVNLALISVPGDYAAAEALKALELNMNVML-FSDNVSLQQEKQIKLLAQ 158 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + ++GP+C G + +G ++ + G +G++ SGT E + Q G G S Sbjct: 159 DKNLLVMGPDC-GTAIINGLPLGF--ANVVKSGCIGVVGASGTGLQEVTCRIDQLGAGVS 215 Query: 179 TAVGIGGDPVK----GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 A+G GG + G + L DE T IV++ + A A + L+ +A+ Sbjct: 216 QAIGTGGHDLHEEIGGISMLFGLNALAQDENTHVIVLISK--PPARHVAEKILR-QAQTC 272 Query: 235 RKKPIVGFVAGKTA 248 K +V F+ + A Sbjct: 273 GKPVVVNFLGAEPA 286 >gi|84622094|ref|YP_449466.1| hypothetical protein XOO_0437 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84366034|dbj|BAE67192.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 902 Score = 37.0 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 6/124 (4%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP+C G++ P + + + G + ++S S + V +G S V Sbjct: 125 RILGPHCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVS 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G +F D+L+ F D T +I++ E G +A +F+ R KP+V Sbjct: 185 LGD--TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVV 238 Query: 243 VAGK 246 +G+ Sbjct: 239 KSGR 242 >gi|225182006|ref|ZP_03735438.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Dethiobacter alkaliphilus AHT 1] gi|225167291|gb|EEG76110.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Dethiobacter alkaliphilus AHT 1] Length = 707 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 19/220 (8%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD---MVRVKARLE---KSSSRLI 125 + +VI VP + D E E+ + +V +T G + + R K L+ + R++ Sbjct: 69 DVAVISVPAQLSLDVARECGESGVKFLVVVTAGFKEIGDEGLKREKELLKICRQHKMRMV 128 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE-GLGQSTAVGIG 184 GPN GI+ + ++G + +S+SG + A+F S+ GLG S V +G Sbjct: 129 GPNVVGIMDTHTPANASFAEGFPKQGEIAFISQSGAMLL-AIFDWSRSVGLGFSRFVSMG 187 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + +V ++ A + + V++ I A + +FL ++ +KKP++ + Sbjct: 188 NK----ADLNEVDFIWSAAQDPNTRVILCYIEDVA--DGKRFLDVVSEACKKKPVIILKS 241 Query: 245 GKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIA 283 G + R H GA+ G A D A ++ G+ A Sbjct: 242 GTSQAGARAASSHTGAL--AGSDLAYD--TAFRQCGVIRA 277 >gi|284174581|ref|ZP_06388550.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus solfataricus 98/2] Length = 319 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 13/141 (9%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPN GI+TP+ + ++G++G++ +SG L + + +G S V Sbjct: 123 RVLGPNTFGIITPEFN--ATFTYTDVKRGNIGLVVQSGGLGVYMLNWAQKYRIGISYMVS 180 Query: 183 IGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G VK E I+ L D T +I + E G ++ A FL+ + R+KP+V Sbjct: 181 LGNQADVKEYEVINYLS---RDAETRAIFVYLE--GVSDGNA--FLETLPEATRRKPVV- 232 Query: 242 FVAGKTAPPGRTMG--HAGAV 260 F+ G G + H G++ Sbjct: 233 FLKGGVTNSGASAAKTHTGSL 253 >gi|262403617|ref|ZP_06080175.1| protein acetyltransferase [Vibrio sp. RC586] gi|262350121|gb|EEY99256.1| protein acetyltransferase [Vibrio sp. RC586] Length = 893 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 2/92 (2%) Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S+ R++GPN G++ P G KG++ +S+S + + + +G+G S Sbjct: 123 SNMRILGPNSLGLILPWIQFNGSFSPVSALKGNIAFISQSAAVCTTILDWANDKGIGFSA 182 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 + +G +F D+L+ D+ T++I++ Sbjct: 183 FISLGN--ASDVDFADLLDTLSTDKYTDAILL 212 >gi|118590616|ref|ZP_01548017.1| hypothetical protein SIAM614_05598 [Stappia aggregata IAM 12614] gi|118436592|gb|EAV43232.1| hypothetical protein SIAM614_05598 [Stappia aggregata IAM 12614] Length = 909 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 7/142 (4%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++ RLIGP G+ P + ++ KG V SRSG + + G Sbjct: 120 QATNLRLIGPGTLGLAVPATGLNALLSAERPEKGEVAFFSRSGAVLNATLSWAKAHRTGF 179 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V +G + D+++ F D T +IV+ + G A +F+ R K Sbjct: 180 SAVVSLGAR--MDVDISDLIDYFAQDYHTRAIVL--HLEGIAVPR--KFISAARAAARSK 233 Query: 238 PIVGFVAGKTAPPGRT-MGHAG 258 P++ +GK+ G T HAG Sbjct: 234 PVIVIRSGKSRDSGGTGRTHAG 255 >gi|26250586|ref|NP_756626.1| hypothetical protein c4767 [Escherichia coli CFT073] gi|227888568|ref|ZP_04006373.1| YahF/FdrA family protein [Escherichia coli 83972] gi|300985636|ref|ZP_07177523.1| bacterial FdrA protein [Escherichia coli MS 45-1] gi|301047271|ref|ZP_07194357.1| bacterial FdrA protein [Escherichia coli MS 185-1] gi|331660190|ref|ZP_08361126.1| FdrA [Escherichia coli TA206] gi|26111016|gb|AAN83200.1|AE016769_315 Hypothetical protein yahF [Escherichia coli CFT073] gi|222035541|emb|CAP78286.1| hypothetical protein LF82_593 [Escherichia coli LF82] gi|227834407|gb|EEJ44873.1| YahF/FdrA family protein [Escherichia coli 83972] gi|300300790|gb|EFJ57175.1| bacterial FdrA protein [Escherichia coli MS 185-1] gi|300408020|gb|EFJ91558.1| bacterial FdrA protein [Escherichia coli MS 45-1] gi|307555969|gb|ADN48744.1| YahF/FdrA-like protein [Escherichia coli ABU 83972] gi|312948396|gb|ADR29223.1| YahF/FdrA-like protein [Escherichia coli O83:H1 str. NRG 857C] gi|315293176|gb|EFU52528.1| bacterial FdrA protein [Escherichia coli MS 153-1] gi|320197650|gb|EFW72262.1| Protein fdrA [Escherichia coli WV_060327] gi|331052758|gb|EGI24793.1| FdrA [Escherichia coli TA206] Length = 519 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 32/148 (21%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I VP A ++++ + +++ ++ + + +K + ++GP+C Sbjct: 115 ANLALISVPGDYAAAEAMKALNLGMNVMM-FSDNVSIGQEKSIKTLARERQRIVMGPDC- 172 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG----D 186 G + +G ++ ++G++G++ SGT E + Q G G S A+G GG + Sbjct: 173 GTAIVNGIPLGF--ANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGHDLSE 230 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGE 214 + G + L+ D+ T IV++ + Sbjct: 231 EIGGISMLFALDALAQDDETRVIVLISK 258 >gi|134099003|ref|YP_001104664.1| acyl-CoA synthetase (NDP forming type) [Saccharopolyspora erythraea NRRL 2338] gi|133911626|emb|CAM01739.1| acyl-CoA synthetase (NDP forming type) [Saccharopolyspora erythraea NRRL 2338] Length = 892 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 16/199 (8%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMV 111 ++P F V E E + V+ VP + +V ++ G+ PVL Sbjct: 239 SLPAFADVEELPE--VPDLVVVCVPAEAVPQVAESCGRKGVRALVVVSAGVTSDPVLAHG 296 Query: 112 RVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 V A + + RL+GPNC G++ PD G VG++++SG + + Sbjct: 297 LVDA-VRRWGMRLVGPNCLGVINTDPDVRLDATFTSGCAPAGDVGVITQSGGVGIALLDG 355 Query: 170 TSQEGLGQSTAVGIGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + GLG S+ V +G V G D+L + DE T V+ E G+ +F Sbjct: 356 LAACGLGVSSVVSVGDKYDVSGN---DMLLWWQRDERTRLAVVYLESFGNPR----KFSW 408 Query: 229 DEAKRGRKKPIVGFVAGKT 247 + R KP++ +G + Sbjct: 409 LSRRMARGKPVIVLKSGAS 427 >gi|110644167|ref|YP_671897.1| YahF/FdrA-like protein [Escherichia coli 536] gi|191173922|ref|ZP_03035441.1| bacterial FdrA protein [Escherichia coli F11] gi|300979484|ref|ZP_07174578.1| bacterial FdrA protein [Escherichia coli MS 200-1] gi|110345759|gb|ABG71996.1| YahF/FdrA-like protein [Escherichia coli 536] gi|190905789|gb|EDV65409.1| bacterial FdrA protein [Escherichia coli F11] gi|300307986|gb|EFJ62506.1| bacterial FdrA protein [Escherichia coli MS 200-1] gi|324014687|gb|EGB83906.1| bacterial FdrA protein [Escherichia coli MS 60-1] Length = 519 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 32/148 (21%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 AN ++I VP A ++++ + +++ ++ + + +K + ++GP+C Sbjct: 115 ANLALISVPGDYAAAEAMKALNLGMNVMM-FSDNVSIGQEKSIKTLARERQRIVMGPDC- 172 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG----D 186 G + +G ++ ++G++G++ SGT E + Q G G S A+G GG + Sbjct: 173 GTAIVNGIPLGF--ANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGHDLSE 230 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGE 214 + G + L+ D+ T IV++ + Sbjct: 231 EIGGISMLFALDALAQDDETRVIVLISK 258 >gi|229578739|ref|YP_002837137.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus Y.G.57.14] gi|228009453|gb|ACP45215.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus Y.G.57.14] Length = 660 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 10/126 (7%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPN GI+TP+ + ++G++G++ +SG L + + +G S V Sbjct: 123 RVLGPNTFGIITPEFN--ATFTYTDVKRGNIGLVVQSGGLGVYMLNWAQKYRIGISYMVS 180 Query: 183 IGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G VK E I+ L D T +I + E G ++ A FL+ + R+KP+V Sbjct: 181 LGNQADVKEYEVINYLS---RDAETRAIFVYLE--GVSDGNA--FLETLPEATRRKPVVF 233 Query: 242 FVAGKT 247 G T Sbjct: 234 LKGGVT 239 >gi|227827072|ref|YP_002828851.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus M.14.25] gi|238619237|ref|YP_002914062.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus M.16.4] gi|227458867|gb|ACP37553.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus M.14.25] gi|238380306|gb|ACR41394.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus M.16.4] Length = 660 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 10/126 (7%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPN GI+TP+ + ++G++G++ +SG L + + +G S V Sbjct: 123 RVLGPNTFGIITPEFN--ATFTYTDVKRGNIGLVVQSGGLGVYMLNWAQKYRIGISYMVS 180 Query: 183 IGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G VK E I+ L D T +I + E G ++ A FL+ + R+KP+V Sbjct: 181 LGNQADVKEYEVINYLS---RDAETRAIFVYLE--GVSDGNA--FLETLPEATRRKPVVF 233 Query: 242 FVAGKT 247 G T Sbjct: 234 LKGGVT 239 >gi|257388337|ref|YP_003178110.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Halomicrobium mukohataei DSM 12286] gi|257170644|gb|ACV48403.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Halomicrobium mukohataei DSM 12286] Length = 699 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 24/217 (11%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSS---RLI 125 + +VI VPP A D+I E+ EA I +V IT G R K E ++ L+ Sbjct: 68 DVAVIVVPPDVAVDSIREAGEAGIENVVVITAGFGETGAEGAAREKDLRETAAEYDLNLV 127 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 GPN GI++ + + G + +S+SG + ++ +G V +G Sbjct: 128 GPNSLGIMSTPTGLNATFGNEMATSGGISFMSQSGAFVTAVLDWAAERDVGFKDIVSLGN 187 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE--EEAAQFLKDEAKRGRKKPIVGFV 243 + D ++ + D T+ I+ G E E+ A F++ + + PIV Sbjct: 188 KAILDER--DFIDEWGTDPDTDVIL------GYLEDIEDGAGFVQTAREVTQDTPIVLVK 239 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +G+T AGA + GA A EAG+ Sbjct: 240 SGRT--------DAGASAAASHTGAMAGSEAAYEAGL 268 >gi|323474129|gb|ADX84735.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus REY15A] gi|323476800|gb|ADX82038.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus HVE10/4] Length = 660 Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 10/126 (7%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPN GI+TP+ + ++G++G++ +SG L + + +G S V Sbjct: 123 RVLGPNTFGIITPEFN--ATFTYTDVKRGNIGLVVQSGGLGVYMLNWAQKYRIGISYMVS 180 Query: 183 IGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G VK E I+ L D T +I + E G ++ A FL+ + R+KP+V Sbjct: 181 LGNQADVKEYEVINYLS---RDAETRAIFVYLE--GVSDGNA--FLETLPEATRRKPVVF 233 Query: 242 FVAGKT 247 G T Sbjct: 234 LKGGVT 239 >gi|229582503|ref|YP_002840902.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus Y.N.15.51] gi|229584239|ref|YP_002842740.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus M.16.27] gi|284997114|ref|YP_003418881.1| CoA-binding domain protein [Sulfolobus islandicus L.D.8.5] gi|228013219|gb|ACP48980.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus Y.N.15.51] gi|228019288|gb|ACP54695.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus M.16.27] gi|284445009|gb|ADB86511.1| CoA-binding domain protein [Sulfolobus islandicus L.D.8.5] Length = 660 Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 10/126 (7%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPN GI+TP+ + ++G++G++ +SG L + + +G S V Sbjct: 123 RVLGPNTFGIITPEFN--ATFTYTDVKRGNIGLVVQSGGLGVYMLNWAQKYRIGISYMVS 180 Query: 183 IGGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G VK E I+ L D T +I + E G ++ A FL+ + R+KP+V Sbjct: 181 LGNQADVKEYEVINYLS---RDAETRAIFVYLE--GVSDGNA--FLETLPEATRRKPVVF 233 Query: 242 FVAGKT 247 G T Sbjct: 234 LKGGVT 239 >gi|220919960|ref|YP_002495263.1| CoA-binding domain protein [Methylobacterium nodulans ORS 2060] gi|219952380|gb|ACL62771.1| CoA-binding domain protein [Methylobacterium nodulans ORS 2060] Length = 722 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 26/185 (14%) Query: 118 EKSSSRLIGPNCPGI--LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 + + RL+GPN G + + C P + +G + S+SG + + + + Sbjct: 382 RRYNIRLMGPNIYGFYYMAKNLCATFCTPFDV--QGQAALSSQSGGIGMAIIGFSRSTKM 439 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S VG+G + D+L F D++T+ I E ++ F + + + Sbjct: 440 GVSAIVGLGNK--SDIDEDDLLAFFEQDDSTKVIAQHCE----DLKDGRSFAEVARRVSK 493 Query: 236 KKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARIGRS 292 KKP++ AG+T+ + H GA+ DKI + K+ G+ A RS Sbjct: 494 KKPVIVLKAGRTSAGAKAASSHTGAL------AGNDKIYEDVFKQCGVIRA-------RS 540 Query: 293 LVELL 297 L +LL Sbjct: 541 LRQLL 545 >gi|166366010|ref|YP_001658283.1| acetyl-CoA synthetase [Microcystis aeruginosa NIES-843] gi|166088383|dbj|BAG03091.1| acetyl-CoA synthetase [Microcystis aeruginosa NIES-843] Length = 902 Score = 36.6 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 93/215 (43%), Gaps = 15/215 (6%) Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII-ESIEAEIPLIVCITEGIPVL---- 108 +++P ++++ + + AA VI P+ AII +S+E ++ + ++ G Sbjct: 65 LDLPSYSSLEDIQ---AAIDLVIITAPAPEIPAIIAQSVEKKVKCALILSTGFRETGQMG 121 Query: 109 -DMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 +++R + R+IGP+ GI + + GS+ ++S+SG + + Sbjct: 122 ENLLREIKAIAGQKLRIIGPHSSGISNLSQNLNATFSPILPKTGSIALISQSGAIAAAVL 181 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + E +G S + +G + ++ ++L D T+SIV+ E + A FL Sbjct: 182 DWSLSENVGFSHFISLG--VLLDVDWGELLYYLGDDPQTKSIVIYLE----SLNNARSFL 235 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 + KPI+ T + HAG + S Sbjct: 236 SSAREVALNKPIIAISRHSTDFDPTALSHAGKLTS 270 >gi|145301075|ref|YP_001143916.1| acyl-CoA synthetase [Aeromonas salmonicida subsp. salmonicida A449] gi|142853847|gb|ABO92168.1| acyl-CoA synthetase [Aeromonas salmonicida subsp. salmonicida A449] Length = 856 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 10/140 (7%) Query: 114 KARLEKSSS----RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 + +L++ SS RL+GPN G+L P + G V +S+S ++ + Sbjct: 109 REQLQRLSSQYDIRLLGPNSMGMLLPAQGINASFSPIAAKPGQVAFVSQSAAVSTTILDW 168 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 Q LG S + +G +F +L+ D T +I++ + +A FL Sbjct: 169 AKQHELGFSAFISLGDH--CDIDFGQLLDQLSRDGTTRAILLYMD----KLHDARHFLSA 222 Query: 230 EAKRGRKKPIVGFVAGKTAP 249 R KPI+ +G+ P Sbjct: 223 ARAASRNKPILVLKSGRHDP 242 >gi|114563099|ref|YP_750612.1| CoA-binding domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114334392|gb|ABI71774.1| CoA-binding domain protein [Shewanella frigidimarina NCIMB 400] Length = 900 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 36/167 (21%), Positives = 74/167 (44%), Gaps = 12/167 (7%) Query: 103 EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTL 162 +G +L++ + A+ + RL+GPN G++ P + + G + +S+S + Sbjct: 111 QGNNLLELTKQYAK--RYGMRLLGPNSLGMILPPIGLNASLAHAGANVGKIAFVSQSAAI 168 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 + + +G+G S+ + +G +F ++L+ D T +I++ + + E Sbjct: 169 CTTVLDWANNKGIGFSSFISLGD--ATDIDFDELLDYLGRDSKTSAIMLYID----SINE 222 Query: 223 AAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 FL R KPI +G++ R A + +GG GG + Sbjct: 223 KRHFLSAARAASRNKPIFVIKSGRS----REGVQAAMLHTGGIGGND 265 >gi|116695380|ref|YP_840956.1| 6-carboxyhexanoate-CoA ligase [Ralstonia eutropha H16] gi|113529879|emb|CAJ96226.1| 6-Carboxyhexanoate-CoA ligase [Ralstonia eutropha H16] Length = 700 Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 10/145 (6%) Query: 121 SSRLIGPNCPGILT-PDSCKI---GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S RL+GPN G++ D+ + G + F GS+G++S+SG + + + + G+G Sbjct: 122 SMRLLGPNTIGLVNLTDNIPLSASGALEMDQFPAGSIGVVSQSGGILGALLSRAAARGIG 181 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S V + + D ++ DEAT I + E S Sbjct: 182 LSKLVSTSNE--VDLDLADFIDYLADDEATRVIALYVE---SVRNPETFRRAALKAARAG 236 Query: 237 KPIVGFVAGKTAPPGR-TMGHAGAV 260 KP+V F G++ R + H GA+ Sbjct: 237 KPVVAFKIGRSESGARAAVSHTGAL 261 >gi|315230937|ref|YP_004071373.1| acetyl-CoA synthetase subunit alpha [Thermococcus barophilus MP] gi|315183965|gb|ADT84150.1| acetyl-CoA synthetase (ADP-forming), alpha chain [Thermococcus barophilus MP] Length = 473 Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust. Identities = 27/129 (20%), Positives = 57/129 (44%), Gaps = 10/129 (7%) Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIF---RKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R+IGPNC G+ PD+ +P + G + +S+SG + + G+G Sbjct: 136 RVIGPNCVGVYVPDTGVDTVFLPEEKMDRPKSGPIAFVSQSGAFAAAMLDWAALAGIGIG 195 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V G + D+++ F+ D+ + + E ++ +F++ + + KP Sbjct: 196 KMVSYGNK--IDVDDADLMDYFIYDDQIKVVTFYIE----GVKDGRKFIEAAKRITKVKP 249 Query: 239 IVGFVAGKT 247 ++ +G+T Sbjct: 250 VIALKSGRT 258 >gi|111022681|ref|YP_705653.1| acid--CoA ligase [Rhodococcus jostii RHA1] gi|110822211|gb|ABG97495.1| probable acid--CoA ligase [Rhodococcus jostii RHA1] Length = 687 Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 4/109 (3%) Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + VP D + E++ + + +T G+P + AR+ + +RL+G N GI Sbjct: 81 LCVPAPFVSDVVDEALTLGVRGFLGVTAGVP--GEAELAARIRSAGARLVGTNSLGIY-- 136 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 DS + F G + I+S+SG L E ++ G+G S V IG Sbjct: 137 DSATDLSLAWGRFTPGPLAIISQSGQLGSELAALGARHGVGVSRFVSIG 185 >gi|94313336|ref|YP_586545.1| CoA-binding domain-containing protein [Cupriavidus metallidurans CH34] gi|93357188|gb|ABF11276.1| acetyl CoA synthetase [Cupriavidus metallidurans CH34] Length = 712 Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 6/101 (5%) Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSI----FRKGSVGILSRSGTLTYEAVFQTSQE 173 +S RL+GPN G++ + +G SI + G VGI+S+SG V Sbjct: 128 RRSGLRLLGPNALGLINVRTGFVGSFASSISLGPIQAGHVGIVSQSGAYGGHLVMAAQSA 187 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 G+G S+ V G + +V++L + D T I + E Sbjct: 188 GVGLSSIVMTGNE--ADITLGEVVQLMVDDPHTRVIALYSE 226 >gi|254173446|ref|ZP_04880119.1| AcdA-5 acetate--coA ligase (ADP-forming) alpha chain [Thermococcus sp. AM4] gi|214032855|gb|EEB73684.1| AcdA-5 acetate--coA ligase (ADP-forming) alpha chain [Thermococcus sp. AM4] Length = 467 Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust. Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 18/186 (9%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS----RLIGP 127 + +VI VP D I E E + + I+ G ++ L K + R++GP Sbjct: 72 DVAVIAVPAKFVPDVIDECGEKGVKGAIVISAGFKEAGRADLEEELVKRARKWGIRVVGP 131 Query: 128 NCPGILTPDS---CKIGIMPGSIFRK--GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 NC G+ ++ C P R G V +S+SG + ++E +G S + Sbjct: 132 NCLGVTNLENGFDCNFN-PPERQARPPFGKVAFMSQSGAFGAAILDWAAREKIGMSKFIS 190 Query: 183 IGG-DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G + ++F+D +L D+ ++ V+ G + G ++ +FL+ + KKP+V Sbjct: 191 LGNMADLDESDFMD----YLGDD-EKTGVITGYLEGV--KDGRKFLETAKRVTLKKPVVI 243 Query: 242 FVAGKT 247 +G+T Sbjct: 244 LKSGRT 249 >gi|212224150|ref|YP_002307386.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus onnurineus NA1] gi|212009107|gb|ACJ16489.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus onnurineus NA1] Length = 472 Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust. Identities = 26/129 (20%), Positives = 57/129 (44%), Gaps = 10/129 (7%) Query: 123 RLIGPNCPGILTPDS-CKIGIMPGSIF---RKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R+IGPNC G+ PD+ +P + + G + +S+SG + + +G Sbjct: 135 RIIGPNCVGVYVPDTGVDTVFLPENKMDRPKSGPIAFVSQSGAFAAAMLDWAAMADIGIG 194 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V G + D+++ F+ D++ + E ++ +F++ + + KP Sbjct: 195 KMVSYGNK--LDVDDADLMDYFIHDDSINVVTFYIE----GVKDGRKFMEAARRITKVKP 248 Query: 239 IVGFVAGKT 247 ++ +G+T Sbjct: 249 VIALKSGRT 257 >gi|300175668|emb|CBK20979.2| Acetyl CoA synthetase subunit ? [Blastocystis hominis] Length = 737 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Query: 116 RLEKSSS-RLIGPNCPGILTPDSCKIGIMPGSIFRK---GSVGILSRSGTL 162 RL K R+IGPNC G+ P S +P K G VG+ S+SG L Sbjct: 141 RLAKEHHCRIIGPNCMGVYDPQSVDTMFLPAIGLAKPKFGPVGVFSQSGAL 191 >gi|302417598|ref|XP_003006630.1| acetolactate synthase [Verticillium albo-atrum VaMs.102] gi|261354232|gb|EEY16660.1| acetolactate synthase [Verticillium albo-atrum VaMs.102] Length = 473 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 20/40 (50%) Query: 45 GSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAG 84 GS YW N+P+ T V K A S++ V P GAG Sbjct: 366 GSVYWIAKRYNIPILTIVLNNKGWNAPRRSLLLVHPDGAG 405 >gi|187920449|ref|YP_001889481.1| CoA-binding domain-containing protein [Burkholderia phytofirmans PsJN] gi|187718887|gb|ACD20110.1| CoA-binding domain protein [Burkholderia phytofirmans PsJN] Length = 704 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 10/145 (6%) Query: 121 SSRLIGPNCPGILTPDS----CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S RL+GPN G++ G + S F G +G++S+SG + + + + G+G Sbjct: 122 SMRLLGPNTIGLVNLTEGIMLSASGALETSSFTAGGIGVVSQSGGILGSLLSRAASRGIG 181 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S V + + D ++ + D+AT I + E G E + L Sbjct: 182 LSKLVSTSNE--ADLDVADFVDYLVDDDATSVIALYME--GLRHPERFR-LAAMRAAAAG 236 Query: 237 KPIVGFVAGKTAPPGRT-MGHAGAV 260 KPIV F G++ R+ + H GA+ Sbjct: 237 KPIVVFKIGRSESGARSAVSHTGAL 261 >gi|240102276|ref|YP_002958584.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA) [Thermococcus gammatolerans EJ3] gi|239909829|gb|ACS32720.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA) [Thermococcus gammatolerans EJ3] Length = 467 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 20/200 (10%) Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 V+ ++ E + + +VI VP D I E E + + I+ G ++ L Sbjct: 60 VYRSIKEIPDEV--DVAVIAVPAKFVPDVIDECGEKGVKGAIVISAGFKEAGRADLEEEL 117 Query: 118 EKSSS----RLIGPNCPGILTPDS---CKIGIMPGSIFRK--GSVGILSRSGTLTYEAVF 168 K + R++GPNC G+ ++ C P R G V +S+SG + Sbjct: 118 LKRARKWGIRVVGPNCLGVTNLENGFDCNFN-PPERQARPPFGKVAFMSQSGAFGAAILD 176 Query: 169 QTSQEGLGQSTAVGIGG-DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++E +G S + +G + ++F+D +L D+ ++ V+ G + G ++ +FL Sbjct: 177 WAAREKIGMSKFISLGNMADLDESDFMD----YLGDD-EKTGVITGYLEGV--KDGRKFL 229 Query: 228 KDEAKRGRKKPIVGFVAGKT 247 + + KKP+V +G+T Sbjct: 230 ETAKRVTLKKPVVILKSGRT 249 >gi|254500981|ref|ZP_05113132.1| CoA binding domain protein [Labrenzia alexandrii DFL-11] gi|222437052|gb|EEE43731.1| CoA binding domain protein [Labrenzia alexandrii DFL-11] Length = 709 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 13/142 (9%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIG----IMPGSIFRKGSVGILSRSGTLTYEAV 167 R+ A + S RLIGPNC G + + G + G I+S+SG Sbjct: 119 RIAAAAQNSGMRLIGPNCIGAFSVSAGWFGTFSSVQASLRLAPGKTAIISQSGAYGAHMF 178 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL--FLADEATESIVMVGEIGGSAEEEAAQ 225 + + G+ V G + IDV E+ + A+ S +M G + Sbjct: 179 YMAQRRGVATDLWVTTGNE-----SDIDVAEVIAYYAEHQDVSTIMAYTEGVKDRDRMCA 233 Query: 226 FLKDEAKRGRKKPIVGFVAGKT 247 L + R KKP++ G T Sbjct: 234 AL--DLARAAKKPVIMIKVGDT 253 >gi|218778877|ref|YP_002430195.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760261|gb|ACL02727.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Desulfatibacillum alkenivorans AK-01] Length = 726 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 17/174 (9%) Query: 113 VKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 +KA +++ RLIGPNC GI+ P ++ G++G +S+SG + + Sbjct: 117 LKAVVKERGIRLIGPNCLGIINTAPGFSMNASFAQAMPAPGNIGFISQSGAMCTAVLDLA 176 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 +G S + G ID+LE D T+ I+M E + +F+ D Sbjct: 177 MGRNIGFSKFISFGNK--ADVSEIDLLEYLGQDPDTDVILMYLE----DITDGRKFM-DV 229 Query: 231 AKR---GRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGI 280 A++ KKP++ +G++ + + H G++ G + D I +++GI Sbjct: 230 ARKITWKYKKPMLAIKSGRSEEGAKAVSSHTGSL--AGSDASYDAI--FQQSGI 279 >gi|170740807|ref|YP_001769462.1| CoA-binding domain-containing protein [Methylobacterium sp. 4-46] gi|168195081|gb|ACA17028.1| CoA-binding domain protein [Methylobacterium sp. 4-46] Length = 918 Score = 36.2 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 9/139 (6%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RL+GP C G+ P + + +G + ++++S T+ S G G S + Sbjct: 125 RLLGPECMGLAVPAARLNASLLAHRPPRGDLALITQSRTVAAGIAEWASGRGYGFSGVLS 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + D L+ F AD T +I++ E +A +F+ R KP+V Sbjct: 185 VG--QAVDVDIADCLDHFSADRGTRAILLHLE----TIRDAPKFMSAARAAARAKPVVVL 238 Query: 243 VAGK---TAPPGRTMGHAG 258 +G+ GR + H+G Sbjct: 239 RSGRHETARADGRPVTHSG 257 >gi|86741637|ref|YP_482037.1| CoA-binding [Frankia sp. CcI3] gi|86568499|gb|ABD12308.1| CoA-binding [Frankia sp. CcI3] Length = 707 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 18/133 (13%) Query: 123 RLIGPNCPGILTP-------DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 RLIGPN G++ + +G P G VG+ ++SG L + S+ L Sbjct: 133 RLIGPNAMGVINTVPTVRLHATFAVGDPP-----PGRVGLFTQSGALAGTFLTDASRRAL 187 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G ST V IG D+L + +D T +++ + G+ +F + + R Sbjct: 188 GISTFVSIGDR--SDVSCNDLLRYWRSDPRTGVVMLHLQSLGNPR----RFARIARELSR 241 Query: 236 KKPIVGFVAGKTA 248 KP+V +G+ A Sbjct: 242 HKPVVALKSGREA 254 >gi|34398404|gb|AAO48572.1| putative acyl-CoA synthetase [Mycobacterium rhodesiae JS60] Length = 662 Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 12/143 (8%) Query: 122 SRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL--GQS 178 +R+IGPNC G+ + I G G + ++S++GT A + L G+ Sbjct: 109 ARVIGPNCFGLQDCNRRLNASISAGLPLGGGDISLVSQAGTYAMAAATHSYDARLRFGKV 168 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 A+G D + +E + L D TE++ E + +A F+++ + KP Sbjct: 169 IALGNTSD-ISASELVAELR---DDPETETLCFALE----SLPDARAFVEEVERTTPSKP 220 Query: 239 IVGFVAGKTAPPGRTMG-HAGAV 260 ++ + AGKT RT H GA+ Sbjct: 221 VIVYKAGKTDVGARTAASHTGAL 243 >gi|328952871|ref|YP_004370205.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109] gi|328453195|gb|AEB09024.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109] Length = 696 Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 12/109 (11%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGI------MPGSIFRKGSVGILSRSGTLTYE 165 +V+ RL R++GPN GI+ + +IG+ +PG R G V ++ +SG + Sbjct: 112 QVQQRLRDHQIRMVGPNGLGII---NLEIGLCLPFMSLPGKP-RLGGVSLVCQSGGVGGN 167 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 + +Q GLG + V + G+ + +E D+L L D T+ I + E Sbjct: 168 VIAWLAQSGLGMNKFVSV-GNKLDISEN-DILSFLLNDPGTKLIYLYME 214 >gi|327311732|ref|YP_004338629.1| CoA-binding domain-containing protein [Thermoproteus uzoniensis 768-20] gi|326948211|gb|AEA13317.1| CoA-binding domain protein [Thermoproteus uzoniensis 768-20] Length = 463 Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust. Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 27/155 (17%) Query: 123 RLIGPNCPGILTPD-SCKIGIMPGSIFRK---GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R++GPNC G+ + +P + G + +S+SG + + + EG+G Sbjct: 126 RVLGPNCVGVYNAEVGLDTMFLPEEKAARPAGGPIAFISQSGAVMTAILDWAAAEGIGIG 185 Query: 179 TAVGIGGDP----------VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 AV +G ++ +++ V L++ G E +FL+ Sbjct: 186 LAVNVGNRADIGEGEILGLLRRLDYVKVAALYIE-------------GFRRRREVEEFLR 232 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISG 263 + R KP++ + AG+ A R A ++G Sbjct: 233 SAKEFSRDKPVLVYKAGRGADSARAAKSHTAALAG 267 >gi|295696582|ref|YP_003589820.1| CoA-binding domain protein [Bacillus tusciae DSM 2912] gi|295412184|gb|ADG06676.1| CoA-binding domain protein [Bacillus tusciae DSM 2912] Length = 799 Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 21/217 (9%) Query: 74 SVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG------P 127 +V+ VPP + + + + ++ IT G+P + V E ++ P Sbjct: 250 AVVAVPPDQVSPVVDDCVTTGVRSVIIITSGLPEEEEKGVPTPAELAARLRRAGARLLGP 309 Query: 128 NCPGILTPD-SCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQTSQEGLGQST--AVGI 183 N G++ D ++ F R+G++ I S SG L + + G+G S+ ++G+ Sbjct: 310 NSLGLVNTDPKVRLNASFAPRFPRRGALAIASHSGALGITILEYAGRMGIGVSSFASMGV 369 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 D V G D+L+ + D T+ I + E G+ +F + + RKKPIV V Sbjct: 370 KAD-VSGN---DLLQYWEDDPETDMIALYLESFGNPR----KFSRITRRITRKKPIVA-V 420 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 G + G + G+V+ + D + ++AGI Sbjct: 421 KGASTESGTAVSLTGSVLPRARDVLVDAL--FRQAGI 455 >gi|73537662|ref|YP_298029.1| CoA-binding [Ralstonia eutropha JMP134] gi|72120999|gb|AAZ63185.1| CoA-binding [Ralstonia eutropha JMP134] Length = 700 Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 24/174 (13%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL------- 108 +P + +VA+ E + ++I VP A A+ E + T G + Sbjct: 60 LPTYASVADLPE--VPDVAIIAVPAQHALQAVKALAERGTKAAILFTAGFAEVSEEGAAM 117 Query: 109 --DMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF------RKGSVGILSRSG 160 +MV + R RL+GPN G++ + +G S F R G VGI+S+SG Sbjct: 118 QAEMVAIARR---GGMRLLGPNTLGMVNMHNGFVGSF--STFSSLGVSRPGRVGIVSQSG 172 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 V + G+ S+ V G + D++ LF AD T+ I + E Sbjct: 173 AYGSHLVSSAMEAGVYPSSIVMTGNE--ADLNVSDIVRLFAADPMTDVIAVYAE 224 >gi|50084972|ref|YP_046482.1| pimeloyl-CoA synthetase [Acinetobacter sp. ADP1] gi|49530948|emb|CAG68660.1| pimeloyl-CoA synthetase [Acinetobacter sp. ADP1] Length = 701 Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 10/127 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL--DMVRVKARL----EKSSSR 123 AA+ +++ VP S A+ E + I + + G D +++ + ++S+ R Sbjct: 69 AADVALLAVPASATVQAVRECAQKGIQTAIVFSAGFAEAGEDGHQMQQEMLNAAKESNLR 128 Query: 124 LIGPNCPGILTPDSCKIG----IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 L+GPNC G+ G ++ G G+V I+S+SG Q GLG Sbjct: 129 LLGPNCLGVFNAYKKFYGTFSTVLDGDFIEPGAVSIVSQSGAYGSHIAHLCRQRGLGIGY 188 Query: 180 AVGIGGD 186 V G + Sbjct: 189 WVTTGNE 195 >gi|323144570|ref|ZP_08079159.1| putative membrane protein FdrA [Succinatimonas hippei YIT 12066] gi|322415646|gb|EFY06391.1| putative membrane protein FdrA [Succinatimonas hippei YIT 12066] Length = 495 Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 15/175 (8%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILS 157 ++ ++ + D + +K K ++GP+C G + +G ++ +KGS+G++ Sbjct: 140 VMLFSDNVSEDDELMLKEEAVKRDLLMMGPDC-GTAVINGMPLGF--ANVLKKGSIGLVG 196 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGG----DPVKGTEFIDVLELFLADEATESIVMVG 213 SGT E S G G +G GG + + G + L+L D++T+ I ++ Sbjct: 197 ASGTGLQEVSCAISNLGGGLCQVIGTGGRDLHEKIGGLMTMYALDLLARDDSTKVIGVIS 256 Query: 214 EIGGSAEEEAAQFLKDEAK-RGRKKPIVGFVAGKTAPPGR--TMGHAGAVISGGK 265 + S+ +E K AK + KKP+V G P + + +A ++I K Sbjct: 257 KPPASSVKE-----KIIAKLKSIKKPVVVHFVGDKNPKSQDGNITYASSLIECAK 306 >gi|170741641|ref|YP_001770296.1| CoA-binding domain-containing protein [Methylobacterium sp. 4-46] gi|168195915|gb|ACA17862.1| CoA-binding domain protein [Methylobacterium sp. 4-46] Length = 707 Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%) Query: 126 GPNCPGILT-PDSCKIGI--MPGS-IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 GPNC G++ D + +PG+ + + +GI+S+SG + GLG S +V Sbjct: 129 GPNCLGLVNFVDGVPLTFVELPGTRLAGRPGIGIVSQSGAMAAVLAVTLQARGLGLSYSV 188 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 G + G E D +E + D T IV++ E Sbjct: 189 STGNEAASGVE--DYVEFLVEDPDTRVIVLIVE 219 >gi|307596479|ref|YP_003902796.1| CoA-binding domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307551680|gb|ADN51745.1| CoA-binding domain protein [Vulcanisaeta distributa DSM 14429] Length = 485 Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 8/143 (5%) Query: 123 RLIGPNCPGILTP-DSCKIGIMPGSIF---RKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R++GPNC G+ + +P + G V ++S+SG + + ++ +G Sbjct: 145 RVLGPNCIGVYNAFNGLDTFFLPEDRMGRPKPGPVALISQSGAVAGAILDWAARRNIGVG 204 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 AV G ++LE F D + IVM E G E + L+ + KP Sbjct: 205 LAVNYGNK--LDINEAELLEYFARDSRVKVIVMYME-GLKYPGEGKKLLEVMKEVSSVKP 261 Query: 239 IVGFVAGKT-APPGRTMGHAGAV 260 +V + AG+T A G H A+ Sbjct: 262 LVVYKAGRTRAATGAVKSHTAAL 284 >gi|46200013|ref|YP_005680.1| 6-carboxyhexanoate-CoA ligase [Thermus thermophilus HB27] gi|46197640|gb|AAS82053.1| 6-carboxyhexanoate-CoA ligase [Thermus thermophilus HB27] Length = 745 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 7/120 (5%) Query: 123 RLIGPNCPGIL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 RL+GP G++ T ++ + ++G + I S+SGTL + + GLG ++ V Sbjct: 319 RLLGPGSLGLVHTHPGVRLAAGLAPLPKEGVLAISSQSGTLGRAVLAFAEEMGLGVASFV 378 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G + D+L+ + DE T I++ E G+ +F + + G+KKPI+ Sbjct: 379 SLGAKADISSN--DLLQFWEEDERTRVILLYLEHFGNPR----RFSRLARRIGKKKPILA 432 >gi|55980245|ref|YP_143542.1| acyl-CoA synthetase [Thermus thermophilus HB8] gi|55771658|dbj|BAD70099.1| probable acyl-CoA synthetase [Thermus thermophilus HB8] Length = 706 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 7/120 (5%) Query: 123 RLIGPNCPGIL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 RL+GP G++ T ++ + ++G + I S+SGTL + + GLG ++ V Sbjct: 280 RLLGPGSLGLVHTHPGVRLAAGLAPLPKEGVLAISSQSGTLGRAVLAFAEEMGLGVASFV 339 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G + D+L+ + DE T I++ E G+ +F + + G+KKPI+ Sbjct: 340 SLGAKADISSN--DLLQFWEEDERTRVILLYLEHFGNPR----RFSRLARRIGKKKPILA 393 >gi|229585969|ref|YP_002844471.1| ABC transporter related [Sulfolobus islandicus M.16.27] gi|228021019|gb|ACP56426.1| ABC transporter related [Sulfolobus islandicus M.16.27] Length = 266 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 7/80 (8%) Query: 124 LIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++G N G T GI+P G + RKGSVG LS S L E T +E L + Sbjct: 32 ILGKNGAGKTTTLRVIAGILPVIKGRVIRKGSVGYLSHSFALPNE---MTVREALNFFSK 88 Query: 181 VGIGGDPVKGTEFIDVLELF 200 V +GGDP + E + EL Sbjct: 89 V-LGGDPDRVIEEFKLSELL 107 >gi|262089241|gb|ACY24463.1| CoA-binding domain-containing protein [uncultured crenarchaeote 29d5] Length = 706 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 31/198 (15%) Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF----RKGSVGILSRSGTLTYEAV 167 RV+ + R+IGPNC GI ++ G + ++G+V LS+SGT+ Sbjct: 361 RVQDLSRELKVRIIGPNCIGIFNGENRLDCAFQGHLRMLRPKQGNVSFLSQSGTVG--IA 418 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 F + + G S + G + D++ D +T I + E G + +F+ Sbjct: 419 FMETSDAFGLSKMISYGNR--SDVDEADMIHYLAQDPSTNVIGLYVEGLG----DGRKFM 472 Query: 228 KDEAK--RGRKKPIVGFVAGKTAPPGR-------TMGHAGAVISGGKGGAEDKINAMKEA 278 + +KPIV F G++ + ++G + AVISG A ++ Sbjct: 473 NSAKNVIKQYQKPIVVFKNGRSTKGAKQAASHTGSLGGSFAVISG----------AFEQT 522 Query: 279 GICIAPSPARIGRSLVEL 296 GI S + SL L Sbjct: 523 GIISVDSYEELTSSLKAL 540 >gi|187934838|ref|YP_001885312.1| CoA-binding domain protein [Clostridium botulinum B str. Eklund 17B] gi|187722991|gb|ACD24212.1| CoA-binding domain protein [Clostridium botulinum B str. Eklund 17B] Length = 471 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 11/158 (6%) Query: 124 LIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 LIGPN G+ +P + G +P + KG V ++S+SG A+ + + G S VG Sbjct: 135 LIGPNLVGMGSPYLNFNCGFIP-YLPIKGPVAMISQSGANLLAALGTSQSDHFGMSFFVG 193 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G +F + + DE T+ + + I G EA F+ K KKPIV Sbjct: 194 LGNK--ADVDFCEFISYAGIDENTKCLSVY--IEGLDSPEA--FIDVCKKFNHKKPIVTI 247 Query: 243 -VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 V G H + G DKI +EAG Sbjct: 248 KVGGSKIGVKAAFAHTASENEGTDDAYYDKI--FEEAG 283 >gi|222875271|gb|EEF12402.1| predicted protein [Populus trichocarpa] Length = 229 Score = 35.8 bits (81), Expect = 7.5, Method: Compositional matrix adjust. Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 6/89 (6%) Query: 123 RLIGPNCPGILTPDSCKI----GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RL+GPN G++ S + ++ +G V ++S+SG++ + + + GLG + Sbjct: 143 RLLGPNSIGVVDVHSGAVLSVNAVLEMDTLHRGPVSVISQSGSMLGALLSRGAARGLGFA 202 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATE 207 V +G + G ++++L + D ATE Sbjct: 203 KLVSVGNESDIGVX--ELVDLLVDDAATE 229 >gi|84060810|ref|YP_444012.1| hypothetical protein O2ColV168 [Escherichia coli] gi|83743392|gb|ABC42270.1| conserved hypothetical protein [Escherichia coli] Length = 352 Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 7/94 (7%) Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GP+C G + +G ++ ++G++G++ SGT E + Q G G S A+G G Sbjct: 1 MGPDC-GTAIVNGIPLGF--ANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTG 57 Query: 185 G----DPVKGTEFIDVLELFLADEATESIVMVGE 214 G + + G + L+ D+ T IV++ + Sbjct: 58 GHDLSEEIGGISMLFALDALAQDDETHVIVLISK 91 >gi|261212350|ref|ZP_05926635.1| protein acetyltransferase [Vibrio sp. RC341] gi|260838281|gb|EEX64937.1| protein acetyltransferase [Vibrio sp. RC341] Length = 893 Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust. Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 2/89 (2%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPN G++ P G KG++ +S+S + + + +G+G S + Sbjct: 126 RILGPNSLGLMLPWIQFNGSFSPVSALKGNIAFISQSAAVCTTILDWANDKGIGFSAFIS 185 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVM 211 +G +F D+L+ D+ T++I++ Sbjct: 186 LGN--ASDVDFADLLDTLSTDKHTDAILL 212 >gi|84501897|ref|ZP_01000055.1| acetyl-CoA synthetase [Oceanicola batsensis HTCC2597] gi|84389892|gb|EAQ02526.1| acetyl-CoA synthetase [Oceanicola batsensis HTCC2597] Length = 699 Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 9/130 (6%) Query: 123 RLIGPNCPGILT-PDSCKIGIMPG---SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RL+GPNC GI + PG + + G V I+S+SG + GLG + Sbjct: 123 RLVGPNCLGIANVRHNLYATFTPGVEKHLPKPGGVSIVSQSGAFGSYCMTLVRMRGLGVN 182 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 G +F D + D+ T I+ E G + + + L E R R+KP Sbjct: 183 IWATTGNS--CDVDFADAVAYCAQDDDTRVIMGYLE-GATDRDRLVEAL--EMARAREKP 237 Query: 239 IVGFVAGKTA 248 +V G++A Sbjct: 238 VVMMKVGRSA 247 >gi|292489191|ref|YP_003532078.1| hypothetical protein EAMY_2723 [Erwinia amylovora CFBP1430] gi|292900309|ref|YP_003539678.1| acyl-CoA synthetase [Erwinia amylovora ATCC 49946] gi|291200157|emb|CBJ47283.1| putative acyl-CoA synthetase [Erwinia amylovora ATCC 49946] gi|291554625|emb|CBA22296.1| Uncharacterized protein yfiQ [Erwinia amylovora CFBP1430] Length = 887 Score = 35.8 bits (81), Expect = 8.3, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 19/185 (10%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD---SCKIGIMPGSIFRKGSVGIL 156 CI P + +KA + RL+GPN G++ P + +P R+G + + Sbjct: 97 CIVLSAPPDQLAELKACASRWQMRLLGPNSLGLIAPWQGLNASFSPVPA---RRGKLAFI 153 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIG 216 S+S ++ + Q LG S + +G + D+L+ D T +I++ E Sbjct: 154 SQSSAVSNTILDWAQQRQLGFSWFIALGD--SLDIDADDLLDFLARDGKTSAILLYLE-- 209 Query: 217 GSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMK 276 +A +F+ R KPI+ +G++ R + GG A D A++ Sbjct: 210 --HLSDARRFVSAARSASRNKPILVIKSGRSPHAQRLLN-----TQGGMDAAWDA--AIQ 260 Query: 277 EAGIC 281 AG+ Sbjct: 261 RAGLL 265 >gi|312173352|emb|CBX81607.1| Uncharacterized protein yfiQ [Erwinia amylovora ATCC BAA-2158] Length = 887 Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 19/185 (10%) Query: 100 CITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD---SCKIGIMPGSIFRKGSVGIL 156 CI P + +KA + RL+GPN G++ P + +P R+G + + Sbjct: 97 CIVLSAPPDQLAELKACASRWQMRLLGPNSLGLIAPWQGLNASFSPVPA---RRGKLAFI 153 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIG 216 S+S ++ + Q LG S + +G + D+L+ D T +I++ E Sbjct: 154 SQSSAVSNTILDWAQQRQLGFSWFIALGD--SLDIDADDLLDFLARDGKTSAILLYLE-- 209 Query: 217 GSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMK 276 +A +F+ R KPI+ +G++ R + GG A D A++ Sbjct: 210 --HLSDARRFVSAARSASRNKPILVIKSGRSPHAQRLLN-----TQGGMDAAWDA--AIQ 260 Query: 277 EAGIC 281 AG+ Sbjct: 261 RAGLL 265 >gi|288560826|ref|YP_003424312.1| ADP-dependent acetyl-CoA synthetase Acs [Methanobrevibacter ruminantium M1] gi|288543536|gb|ADC47420.1| ADP-dependent acetyl-CoA synthetase Acs [Methanobrevibacter ruminantium M1] Length = 699 Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 14/127 (11%) Query: 118 EKSSSRLIGPNCPGIL---TPDSCKIG-IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 EK +IGPN GI TP + IMP +G++ +S+SG + + + Sbjct: 121 EKYGINIIGPNSLGITDSHTPLNASFSQIMP----PEGNIAFISQSGAMMVAIIDWSVTS 176 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G+G S + +G GT I+++E D+ T ++ E + E F++ K Sbjct: 177 GIGFSKIISLGNK--AGTTEIELIEYLSYDDETAVVICYLE----SITEDDDFVRTLRKV 230 Query: 234 GRKKPIV 240 KKP++ Sbjct: 231 SYKKPVI 237 >gi|323702698|ref|ZP_08114359.1| CoA-binding domain protein [Desulfotomaculum nigrificans DSM 574] gi|323532361|gb|EGB22239.1| CoA-binding domain protein [Desulfotomaculum nigrificans DSM 574] Length = 701 Score = 35.8 bits (81), Expect = 8.7, Method: Compositional matrix adjust. Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 18/175 (10%) Query: 124 LIGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GPNC GI+ + S+F +G + +S+S + + + LG S +G Sbjct: 127 MVGPNCVGIMN-THVPVNASCSSVFPYQGDIAFISQSSAMLTSIIDWSKSNHLGFSQVIG 185 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + D +E D T+ I+ E + + FL+ + ++KP++ Sbjct: 186 LGNK--AHLDEADFIEAIAKDPMTKVILCYIEDVNNGK----HFLEVVTRVAKQKPVIIL 239 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +G + + + ++G E A +AGI A RS+ EL Sbjct: 240 KSGSSQAGAQAVSSHTGELAGSDLAYE---TAFTQAGILRA-------RSMTELF 284 >gi|110801958|ref|YP_699716.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Clostridium perfringens SM101] gi|118595651|sp|Q0SQ91|MURD_CLOPS RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase gi|110682459|gb|ABG85829.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium perfringens SM101] Length = 458 Score = 35.8 bits (81), Expect = 8.7, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 8/55 (14%) Query: 13 VQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 V G+TG G T T +V + ++G WTGGN+ P+F+ + E KE Sbjct: 119 VYGVTGSDGKTTT--------TTIVSKLLSQEGYKTWTGGNIGTPLFSNIEEIKE 165 >gi|168211219|ref|ZP_02636844.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium perfringens B str. ATCC 3626] gi|182626019|ref|ZP_02953782.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium perfringens D str. JGS1721] gi|170710774|gb|EDT22956.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium perfringens B str. ATCC 3626] gi|177908726|gb|EDT71237.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium perfringens D str. JGS1721] Length = 458 Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 8/55 (14%) Query: 13 VQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 V G+TG G T T +V + ++G WTGGN+ P+F+ + E KE Sbjct: 119 VYGVTGSDGKTTT--------TTIVSKLLSQEGYKTWTGGNIGTPLFSNIEEIKE 165 >gi|18311441|ref|NP_563375.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Clostridium perfringens str. 13] gi|30316081|sp|Q8XHM4|MURD_CLOPE RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase gi|18146125|dbj|BAB82165.1| UDP-N-acetylmuramoylalanine D-glutamate ligase [Clostridium perfringens str. 13] Length = 458 Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 8/55 (14%) Query: 13 VQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 V G+TG G T T +V + ++G WTGGN+ P+F+ + E KE Sbjct: 119 VYGVTGSDGKTTT--------TTIVSKLLSQEGYKTWTGGNIGTPLFSNIEEIKE 165 >gi|168218219|ref|ZP_02643844.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium perfringens NCTC 8239] gi|182379758|gb|EDT77237.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium perfringens NCTC 8239] Length = 458 Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 8/55 (14%) Query: 13 VQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 V G+TG G T T +V + ++G WTGGN+ P+F+ + E KE Sbjct: 119 VYGVTGSDGKTTT--------TTIVSKLLSQEGYKTWTGGNIGTPLFSNIEEIKE 165 >gi|169343170|ref|ZP_02864191.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium perfringens C str. JGS1495] gi|169298722|gb|EDS80798.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium perfringens C str. JGS1495] Length = 458 Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 8/55 (14%) Query: 13 VQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 V G+TG G T T +V + ++G WTGGN+ P+F+ + E KE Sbjct: 119 VYGVTGSDGKTTT--------TTIVSKLLSQEGYKTWTGGNIGTPLFSNIEEIKE 165 >gi|319942556|ref|ZP_08016865.1| hypothetical protein HMPREF9464_02084 [Sutterella wadsworthensis 3_1_45B] gi|319803852|gb|EFW00774.1| hypothetical protein HMPREF9464_02084 [Sutterella wadsworthensis 3_1_45B] Length = 746 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 20/136 (14%) Query: 115 ARLEKSSSRLIGPNCPGILTP------DSCKIGIMPGSIFRKGSVGILSRSGTLT--YEA 166 A++ + R++GPNC G++ D+C +P + G +G +S+SG L Sbjct: 157 AKVRANGMRMVGPNCLGVVNTNPNVRLDACFAESLPVA----GDIGFVSQSGALGGGILN 212 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + G Q ++G D T LE + D + I++ E + + A F Sbjct: 213 ILKDLNVGFAQFISIGNQADVNAET----ALEYWENDPDVKQILLYME----SIPDPANF 264 Query: 227 LKDEAKRGRKKPIVGF 242 K + +KKPIV Sbjct: 265 RKLATRISKKKPIVAL 280 >gi|218961869|ref|YP_001741644.1| FdrA [Candidatus Cloacamonas acidaminovorans] gi|167730526|emb|CAO81438.1| FdrA [Candidatus Cloacamonas acidaminovorans] Length = 505 Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 9/122 (7%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNC-PGILTPDSCKIGIMPGSIFRKGSVGIL 156 I+ ++ + + D + +K + K ++GP+C IL + + + +G +GI+ Sbjct: 143 ILLFSDNVSIEDELSLKQKALKKGLLMMGPDCGTAILN----GVPLAFANNVPRGKIGIV 198 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGG----DPVKGTEFIDVLELFLADEATESIVMV 212 S SGT E + G S A G GG + G LE L DE TE I++ Sbjct: 199 SASGTGLQEISTTIANLSGGISQAFGTGGRDGKKEIGGLMLTACLEYLLEDENTEVIIVT 258 Query: 213 GE 214 G+ Sbjct: 259 GK 260 >gi|110801072|ref|YP_697147.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Clostridium perfringens ATCC 13124] gi|168215153|ref|ZP_02640778.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium perfringens CPE str. F4969] gi|118595650|sp|Q0TMJ3|MURD_CLOP1 RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase gi|110675719|gb|ABG84706.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium perfringens ATCC 13124] gi|170713450|gb|EDT25632.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium perfringens CPE str. F4969] Length = 458 Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 8/55 (14%) Query: 13 VQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 V G+TG G T T +V + ++G WTGGN+ P+F+ + E KE Sbjct: 119 VYGVTGSDGKTTT--------TTIVSKLLSQEGYKTWTGGNIGTPLFSNIEEIKE 165 >gi|24373676|ref|NP_717719.1| acetyltransferase [Shewanella oneidensis MR-1] gi|24348029|gb|AAN55163.1|AE015653_4 acetyltransferase, GNAT family [Shewanella oneidensis MR-1] Length = 903 Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 16/169 (9%) Query: 103 EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTL 162 +G+ +LD+ A+ + R++GPN GIL P + + G + +S+S + Sbjct: 111 DGVSLLDLAMQHAK--RYGMRILGPNSLGILLPPLGLNASLAHASALSGKIAFVSQSAAI 168 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTE--FIDVLELFLADEATESIVMVGEIGGSAE 220 + + +G+G S+ + +G GT+ F ++L+ D T +I++ + + Sbjct: 169 CTTVLDWANNKGIGFSSFISLG----DGTDINFDELLDYLGRDSRTSAIMLYID----SV 220 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 E FL R KPI+ +G++A R A +GG GG + Sbjct: 221 NEKRHFLSAARAASRNKPILVIKSGRSAEGVR----AAKQHTGGIGGND 265 >gi|254285192|ref|ZP_04960158.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|150425195|gb|EDN16972.1| conserved hypothetical protein [Vibrio cholerae AM-19226] Length = 893 Score = 35.4 bits (80), Expect = 9.8, Method: Compositional matrix adjust. Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 2/89 (2%) Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPN G++ P G KG++ +S+S + + + +G+G S + Sbjct: 126 RILGPNSLGLILPWMQFNGSFSPVSALKGNIAFVSQSAAVCTTILDWANDKGIGFSAFIS 185 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVM 211 +G +F D+L+ D+ T++I++ Sbjct: 186 LGN--ASDIDFADLLDTLSTDKHTDAILL 212 Searching..................................................done Results from round 2 >gi|254781050|ref|YP_003065463.1| succinyl-CoA synthetase subunit alpha [Candidatus Liberibacter asiaticus str. psy62] gi|254040727|gb|ACT57523.1| succinyl-CoA synthetase subunit alpha [Candidatus Liberibacter asiaticus str. psy62] Length = 300 Score = 365 bits (937), Expect = 5e-99, Method: Composition-based stats. Identities = 300/300 (100%), Positives = 300/300 (100%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT Sbjct: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS Sbjct: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA Sbjct: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV Sbjct: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL Sbjct: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 >gi|315122388|ref|YP_004062877.1| succinyl-CoA synthetase subunit alpha [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495790|gb|ADR52389.1| succinyl-CoA synthetase subunit alpha [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 300 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 265/300 (88%), Positives = 281/300 (93%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ+VGGIHPKKG T W GGNVNVPVF Sbjct: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQIVGGIHPKKGGTCWVGGNVNVPVFV 60 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEAKE T ANASVIYVPPSGAGDAIIESI+AEIPLIVCITEGIP LDMVRVKA LE S Sbjct: 61 SVAEAKEHTGANASVIYVPPSGAGDAIIESIKAEIPLIVCITEGIPFLDMVRVKAYLENS 120 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPG+LTP+ CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA Sbjct: 121 SSRLIGPNCPGVLTPEECKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKG+EFID+LELFLAD+ TESI+MVGEIGGSAEE+AA FLKDEAK GRKKP+V Sbjct: 181 VGIGGDPVKGSEFIDILELFLADKETESIIMVGEIGGSAEEDAANFLKDEAKCGRKKPVV 240 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GFVAGKTAPPGRTMGHAGAVI GG+G AEDKI AM+EAGI IA SPAR+G++LVELLG L Sbjct: 241 GFVAGKTAPPGRTMGHAGAVIYGGQGSAEDKIAAMQEAGIRIASSPARMGKTLVELLGGL 300 >gi|327188906|gb|EGE56098.1| succinyl-CoA synthetase protein, alpha subunit [Rhizobium etli CNPAF512] Length = 343 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 233/299 (77%), Positives = 269/299 (89%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN-VPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG +P+F Sbjct: 44 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGAKCESLPIF 103 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KE+T A+A+VIYVPP+GA DAIIE+I+AEIP I CITEGIPV+DMVRVKARL++ Sbjct: 104 ATVAEGKEKTGADATVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR 163 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 164 SKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 223 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+AT SI+M+GEIGGSAEE+AAQFLKDEAK+GRKKP+ Sbjct: 224 AVGIGGDPVKGTEFIDVLEMFLADDATTSIIMIGEIGGSAEEDAAQFLKDEAKKGRKKPM 283 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 284 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIKVSPSPARLGKTLVEVLK 342 >gi|121602296|ref|YP_988363.1| succinyl-CoA synthetase subunit alpha [Bartonella bacilliformis KC583] gi|120614473|gb|ABM45074.1| succinyl-CoA synthetase alpha chain [Bartonella bacilliformis KC583] Length = 300 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 236/299 (78%), Positives = 272/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSIL++K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGI+PKKG WTG +P+F Sbjct: 1 MSILINKDTKVLVQGLTGKTGTFHTEQALAYHGTQMVGGINPKKGGETWTGAKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V E KE+T ANASVIYVPP+GA DAIIE+I+AEI LIVCITEGIPV+DMVRVKA+LEK Sbjct: 61 ASVTEGKEKTGANASVIYVPPAGAADAIIEAIKAEIDLIVCITEGIPVMDMVRVKAKLEK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGILTPD CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLIGPNCPGILTPDECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTSHEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEFIDVLE+FLAD+ TESIVM+GEIGGSAEEEAAQFLKDEAK+GRKKP+ Sbjct: 181 AIGIGGDPVKGTEFIDVLEMFLADDETESIVMIGEIGGSAEEEAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSP+++G++LV +L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPSQVGKTLVSVLK 299 >gi|86359470|ref|YP_471362.1| succinyl-CoA synthetase subunit alpha [Rhizobium etli CFN 42] gi|86283572|gb|ABC92635.1| succinyl-CoA synthetase alpha subunit protein [Rhizobium etli CFN 42] Length = 300 Score = 341 bits (874), Expect = 8e-92, Method: Composition-based stats. Identities = 234/298 (78%), Positives = 271/298 (90%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGSKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KE+T A+A+VIYVPP+GA DAIIE+I+AEIP I CITEGIPV+DMVRVKARL++ Sbjct: 61 ATVAEGKEKTGADATVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLADEAT+SI+M+GEIGGSAEE+AAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADEATQSIIMIGEIGGSAEEDAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIKVSPSPARLGKTLVEVL 298 >gi|241206655|ref|YP_002977751.1| succinyl-CoA synthetase subunit alpha [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860545|gb|ACS58212.1| succinyl-CoA synthetase, alpha subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 300 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 235/299 (78%), Positives = 271/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGAKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KE+T ANASVIYVPP+GA DAIIE+I+AEIP I CITEGIPV+DMVRVKARL++ Sbjct: 61 ATVAEGKEKTGANASVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLADEAT+SI+M+GEIGG+AEE+AAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADEATQSIIMIGEIGGAAEEDAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIKVSPSPARLGKTLVEVLK 299 >gi|114764883|ref|ZP_01444065.1| Succinyl-CoA synthetase, alpha subunit [Pelagibaca bermudensis HTCC2601] gi|114542769|gb|EAU45792.1| Succinyl-CoA synthetase, alpha subunit [Roseovarius sp. HTCC2601] Length = 294 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 194/299 (64%), Positives = 242/299 (80%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MAVLVDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA +T ANASVIYVPP A D+I+E+I+AEI LI+CITEGIPVLDM++VK L S Sbjct: 56 SVHEAVHKTEANASVIYVPPPFAADSILEAIDAEIELIICITEGIPVLDMMKVKRALIDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++G VG++SRSGTLTYEAV QT+ GLGQS+A Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGKVGVVSRSGTLTYEAVKQTTDLGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVL++FL D TESI+M+GEIGGSAEEEAA+FLK++ K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLDMFLDDPETESIIMIGEIGGSAEEEAAEFLKEQKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMK AGI +A SPA +G ++V+ + + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEAMKSAGIVVADSPATLGEAVVKAMEA 294 >gi|190893736|ref|YP_001980278.1| succinyl-CoA synthetase, alpha subunit [Rhizobium etli CIAT 652] gi|190699015|gb|ACE93100.1| succinyl-CoA synthetase protein, alpha subunit [Rhizobium etli CIAT 652] Length = 300 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 232/299 (77%), Positives = 270/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGAKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KE+T A+A+VIYVPP+GA DAIIE+I+AEIP I CITEGIPV+DMVRVKARL++ Sbjct: 61 ATVAEGKEKTGADATVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPG+LTP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGVLTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+AT SI+M+GEIGGSAEE+AAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDATTSIIMIGEIGGSAEEDAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIKVSPSPARLGKTLVEVLK 299 >gi|116254168|ref|YP_770006.1| succinyl-CoA synthetase subunit alpha [Rhizobium leguminosarum bv. viciae 3841] gi|115258816|emb|CAK09922.1| putative succinyl-CoA synthetase alpha chain [Rhizobium leguminosarum bv. viciae 3841] Length = 300 Score = 338 bits (868), Expect = 5e-91, Method: Composition-based stats. Identities = 234/299 (78%), Positives = 271/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGAKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KE+T ANA+VIYVPP+GA DAIIE+I+AEIP I CITEGIPV+DMVRVKARL++ Sbjct: 61 ATVAEGKEKTGANATVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLADEAT+SI+M+GEIGG+AEE+AAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADEATQSIIMIGEIGGAAEEDAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIKVSPSPARLGKTLVEVLK 299 >gi|227823643|ref|YP_002827616.1| succinyl-CoA synthetase subunit alpha [Sinorhizobium fredii NGR234] gi|227342645|gb|ACP26863.1| succinyl-CoA synthetase, alpha subunit [Sinorhizobium fredii NGR234] Length = 300 Score = 338 bits (867), Expect = 5e-91, Method: Composition-based stats. Identities = 233/299 (77%), Positives = 268/299 (89%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+KNTKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG +P+F Sbjct: 1 MSILVNKNTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGESWTGSKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE +E+T A+ASVIYVPP+GA DAIIE+I+AEIP I CITEGIPV DMVRVKARL++ Sbjct: 61 ASVAEGREKTGADASVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVADMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLADEAT SI+M+GEIGGSAEE+AAQFL DEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADEATTSIIMIGEIGGSAEEDAAQFLIDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM++AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMEQAGIRVSPSPARLGKTLVEVLK 299 >gi|149201197|ref|ZP_01878172.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. TM1035] gi|149202192|ref|ZP_01879165.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. TM1035] gi|149144290|gb|EDM32321.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. TM1035] gi|149145530|gb|EDM33556.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. TM1035] Length = 293 Score = 338 bits (867), Expect = 5e-91, Method: Composition-based stats. Identities = 209/298 (70%), Positives = 250/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVDK+T+V+ QGLTG GTFH+EQAI Y TQ+VGG+ P KG T +++PVF Sbjct: 1 MAVLVDKHTRVICQGLTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM+RVK LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TPD+CKIGIMPG I R+GSVG++SRSGTLTYEAV QTS GLGQST Sbjct: 116 KSRLIGPNCPGIITPDACKIGIMPGHIHRRGSVGVVSRSGTLTYEAVKQTSDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ T+SI+M+GEIGGSAEEEAAQFLKDEAKRGRKKP+ Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETQSIIMIGEIGGSAEEEAAQFLKDEAKRGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMK AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEAMKSAGITVAESPAGLGEAVLKAIG 293 >gi|319899503|ref|YP_004159600.1| succinyl-CoA synthetase, alpha chain [Bartonella clarridgeiae 73] gi|319403471|emb|CBI77051.1| succinyl-CoA synthetase, alpha chain [Bartonella clarridgeiae 73] Length = 300 Score = 338 bits (867), Expect = 6e-91, Method: Composition-based stats. Identities = 235/300 (78%), Positives = 268/300 (89%), Gaps = 1/300 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSI V+KNTKVLVQGLTGK GTFHTEQA+ Y TQ+VGGI+PKKG W G +P+F Sbjct: 1 MSIFVNKNTKVLVQGLTGKTGTFHTEQALAYHGTQMVGGINPKKGGETWKGSKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V E KE+T ANASVIYVPP GA DAIIE+I+AEI LIVCITEGIPV+DMV+VKA+LEK Sbjct: 61 ASVVEGKEKTGANASVIYVPPVGAADAIIEAIDAEIGLIVCITEGIPVMDMVKVKAKLEK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPG+LTPD CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLIGPNCPGVLTPDECKIGIMPGAIFKKGSVGVVSRSGTLTYEAVFQTSHEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD TESIVM+GEIGGSAEEEAAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADNETESIVMIGEIGGSAEEEAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSP++IG++LV +L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPSQIGKTLVAVLND 300 >gi|83950441|ref|ZP_00959174.1| succinyl-CoA synthase, alpha subunit [Roseovarius nubinhibens ISM] gi|83838340|gb|EAP77636.1| succinyl-CoA synthase, alpha subunit [Roseovarius nubinhibens ISM] Length = 293 Score = 338 bits (867), Expect = 6e-91, Method: Composition-based stats. Identities = 204/298 (68%), Positives = 248/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVDKNTKV+ QGLTG GTFH+EQAI Y TQ+VGG+ P KG +++PVF Sbjct: 1 MAVLVDKNTKVICQGLTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGQTH----LDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA +RT+A+ASVIYVPP A D+I+E+I+A++PLIVCITEGIPVLDM+RVK LE S Sbjct: 56 SVHEAMDRTSADASVIYVPPPFAADSILEAIDAQMPLIVCITEGIPVLDMMRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPGI+TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSTLIGPNCPGIITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TESI+M+GEIGGSAEEEAAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGA+DKI AMK AGI +A SPA +G +++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGADDKIEAMKSAGIVVAESPAGLGEAVLAAIG 293 >gi|218671347|ref|ZP_03521017.1| succinyl-CoA synthetase subunit alpha [Rhizobium etli GR56] Length = 300 Score = 338 bits (866), Expect = 7e-91, Method: Composition-based stats. Identities = 232/299 (77%), Positives = 271/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TK+LVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVNKDTKILVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGAKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KE+T A+A+VIYVPP+GA DAIIE+I+AEIP I CITEGIPV+DMVRVKARL++ Sbjct: 61 ATVAEGKEKTGADATVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGI+TP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGIMTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLADEAT+SI+M+GEIGGSAEE+AAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADEATQSIIMIGEIGGSAEEDAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIRVSPSPARLGKTLVEVLK 299 >gi|209551254|ref|YP_002283171.1| succinyl-CoA synthetase subunit alpha [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537010|gb|ACI56945.1| succinyl-CoA synthetase, alpha subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 300 Score = 338 bits (866), Expect = 8e-91, Method: Composition-based stats. Identities = 232/299 (77%), Positives = 270/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TK+LVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W+G ++P+F Sbjct: 1 MSILVNKDTKILVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWSGAKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KE+T A+A+VIYVPP+GA DAIIE+I+AEIP I CITEGIPV+DMVRVKARL++ Sbjct: 61 ATVAEGKEKTGADATVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLADEAT SI+M+GEIGGSAEE+AAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADEATTSIIMIGEIGGSAEEDAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIKVSPSPARLGKTLVEVLK 299 >gi|296282622|ref|ZP_06860620.1| succinyl-CoA synthetase, alpha subunit [Citromicrobium bathyomarinum JL354] Length = 296 Score = 338 bits (866), Expect = 8e-91, Method: Composition-based stats. Identities = 206/299 (68%), Positives = 243/299 (81%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+ QG+TG GTFHT+QA+ Y TQ+V G+ P KG T ++ +P F Sbjct: 1 MSILVNKDTKVITQGMTGNTGTFHTQQALDY-GTQMVAGVTPGKGGT----DHIGLPQFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAKE T A AS IYVPP A DAI E+I+AEI LIVCITEGIPVLDMVR KA LE S Sbjct: 56 TVKEAKEATGATASCIYVPPPFAADAICEAIDAEIELIVCITEGIPVLDMVRAKAALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAV QT+ GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPNECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVHQTTNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+LFL D TES++M+GEIGGSAEEEAAQFL ++ K+GR KP V Sbjct: 176 VGIGGDPVNGTNFIDVLDLFLDDPETESMIMIGEIGGSAEEEAAQFLAEQKKKGRWKPTV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA++SGG+GGAEDKI AM+ AGI +A SP+ +G +L LL Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGQGGAEDKIAAMEAAGIRVAQSPSELGTTLAALLKE 294 >gi|84684236|ref|ZP_01012138.1| succinyl-CoA synthase, alpha subunit [Maritimibacter alkaliphilus HTCC2654] gi|84667989|gb|EAQ14457.1| succinyl-CoA synthase, alpha subunit [Rhodobacterales bacterium HTCC2654] Length = 295 Score = 338 bits (866), Expect = 8e-91, Method: Composition-based stats. Identities = 202/298 (67%), Positives = 251/298 (84%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG +++PVF Sbjct: 1 MAVLVDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK +T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPV+DM++VK LE S Sbjct: 56 SVHEAKHKTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVMDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SS LIGPNCPG++TPD+CKIGIMPG I ++G+VG++SRSGTLTYEAV QT+ GLGQS+ Sbjct: 116 SSILIGPNCPGVITPDACKIGIMPGHIHKRGTVGVVSRSGTLTYEAVKQTTDVGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TESI+M+GEIGGSAEEEAAQFLKDEAK+GRKKP+ Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLKDEAKKGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AMK AGI +A SPA++G +++E + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIVVAESPAQLGEAVLEAIK 293 >gi|13473638|ref|NP_105206.1| succinyl-CoA synthetase subunit alpha [Mesorhizobium loti MAFF303099] gi|14024388|dbj|BAB50992.1| succinyl-CoA synthetase alpha-subunit [Mesorhizobium loti MAFF303099] Length = 300 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 232/299 (77%), Positives = 271/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILVDKNTKVLVQGLTGK GTFHTEQA+ Y T++VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVDKNTKVLVQGLTGKTGTFHTEQALAYHGTKMVGGIHPKKGGETWTGSKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE K +T ANASV+YVPP+GA +AI+E+IEAEIPLI+CITEGIPV+DMV+VKARL++ Sbjct: 61 ATVAEGKAKTGANASVVYVPPAGAAEAILEAIEAEIPLIICITEGIPVMDMVKVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S+SRLIGPNCPG+LTPD CKIGIMPG+IFRKGSVG++SRSGTLTYEAVFQT+ GLGQ+T Sbjct: 121 STSRLIGPNCPGVLTPDECKIGIMPGNIFRKGSVGVVSRSGTLTYEAVFQTTNVGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SI+M+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIIMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPAR+G +LVE + Sbjct: 241 AGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIKVSPSPARLGTTLVEAIK 299 >gi|260431532|ref|ZP_05785503.1| succinyl-CoA ligase, alpha subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260415360|gb|EEX08619.1| succinyl-CoA ligase, alpha subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 294 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 202/299 (67%), Positives = 249/299 (83%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGMTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANA+VIYVPP A D+I+E+I+AE+ +IVCITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKHVTEANATVIYVPPPFAADSILEAIDAEMEVIVCITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TESI+M+GEIGGSAEEEAAQFL DEAK+GRKKP+ Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLADEAKKGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AM+ AGI +A SPA++G +++E +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMRSAGIVVAESPAKLGEAVLEAIGK 294 >gi|85704794|ref|ZP_01035895.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. 217] gi|85670612|gb|EAQ25472.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. 217] Length = 293 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 209/298 (70%), Positives = 249/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVDK+T+V+ QGLTG GTFH+EQAI Y TQ+VGG+ P KG T +++PVF Sbjct: 1 MAVLVDKHTRVICQGLTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM+RVK LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TPD+CKIGIMPG I R+GSVG++SRSGTLTYEAV QTS GLGQST Sbjct: 116 KSRLIGPNCPGIITPDACKIGIMPGHIHRRGSVGVVSRSGTLTYEAVKQTSDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ T+SI+M+GEIGGSAEEEAAQFLKDEAKRGRKKP+ Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETQSIIMIGEIGGSAEEEAAQFLKDEAKRGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMK AGI +A SPA +G +++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEAMKSAGITVAESPAGLGEAVLTAIG 293 >gi|126730340|ref|ZP_01746151.1| succinyl-CoA synthetase, alpha subunit [Sagittula stellata E-37] gi|126709073|gb|EBA08128.1| succinyl-CoA synthetase, alpha subunit [Sagittula stellata E-37] Length = 295 Score = 337 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 194/299 (64%), Positives = 243/299 (81%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG +++PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTH----LDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK +T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKAKTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVKRALENS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++TPD+CKIGIMPG I ++G VG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSTLIGPNCPGVITPDACKIGIMPGHIHKRGKVGVVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TE+I+M+GEIGGSAEE+AA FL E K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETEAIIMIGEIGGSAEEDAAAFLASEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+++GGKGGA+DKI AMK AGI +A SPA +G +++E + + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGADDKIEAMKAAGIVVADSPATLGEAVLEAIKN 294 >gi|319780728|ref|YP_004140204.1| succinyl-CoA synthetase subunit alpha [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166616|gb|ADV10154.1| succinyl-CoA synthetase, alpha subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 300 Score = 337 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 232/299 (77%), Positives = 272/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILVDKNTKVLVQGLTGK GTFHTEQA+ Y T++VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVDKNTKVLVQGLTGKTGTFHTEQALAYHGTKMVGGIHPKKGGETWTGAKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KE+T ANASV+YVPP+GA +AI+E+IEAEIPLI+CITEGIPV+DM+RVKARL++ Sbjct: 61 ATVAEGKEKTGANASVVYVPPAGAAEAILEAIEAEIPLIICITEGIPVMDMIRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S+SRLIGPNCPG+LTP+ CKIGIMPG+IFRKGSVG++SRSGTLTYEAVFQT+ GLGQ+T Sbjct: 121 STSRLIGPNCPGVLTPNECKIGIMPGNIFRKGSVGVVSRSGTLTYEAVFQTTNVGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFID+LE+FLADE T+SI+M+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDMLEMFLADEETKSIIMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPAR+G +LVE + Sbjct: 241 AGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIKVSPSPARLGTTLVEAIK 299 >gi|77464546|ref|YP_354050.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodobacter sphaeroides 2.4.1] gi|126463386|ref|YP_001044500.1| succinyl-CoA synthetase, alpha subunit [Rhodobacter sphaeroides ATCC 17029] gi|221640457|ref|YP_002526719.1| 2-oxoglutarate dehydrogenase E1 component [Rhodobacter sphaeroides KD131] gi|332559439|ref|ZP_08413761.1| succinyl-CoA synthetase, alpha subunit [Rhodobacter sphaeroides WS8N] gi|77388964|gb|ABA80149.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodobacter sphaeroides 2.4.1] gi|126105050|gb|ABN77728.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodobacter sphaeroides ATCC 17029] gi|221161238|gb|ACM02218.1| 2-oxoglutarate dehydrogenase E1 component [Rhodobacter sphaeroides KD131] gi|332277151|gb|EGJ22466.1| succinyl-CoA synthetase, alpha subunit [Rhodobacter sphaeroides WS8N] Length = 294 Score = 337 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 203/299 (67%), Positives = 247/299 (82%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV++NTKV+ QG+TG GTFHTEQAI Y T++VGG+ P KG + G +PVF Sbjct: 1 MAVLVNENTKVICQGITGSQGTFHTEQAIAY-GTKMVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+E T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++VK L+ S Sbjct: 56 SVYEAREVTGANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVKRALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPG++TP +CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQS+A Sbjct: 116 SSRLIGPNCPGVITPGACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDLGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE+FLAD T+SI+M+GEIGGSAEEEAAQFL DE KRGR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEMFLADPETQSIIMIGEIGGSAEEEAAQFLADEKKRGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA++SGGKG AE KI AMK AGI +A SPA +G ++++ LG Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGDAESKIEAMKSAGIVVADSPAHLGEAVMQALGK 294 >gi|148554220|ref|YP_001261802.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Sphingomonas wittichii RW1] gi|148499410|gb|ABQ67664.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Sphingomonas wittichii RW1] Length = 294 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 213/298 (71%), Positives = 252/298 (84%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+ QG+TG GTFHTEQA+ Y TQ+VGG+ P KG T G +P F Sbjct: 1 MSILVNKNTKVITQGMTGNTGTFHTEQALAY-GTQMVGGVTPGKGGTTHIG----LPNFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A+ASVIYVPP A D+I+E+I+AE+PLIVCITEGIPV+DM+RVK L+ S Sbjct: 56 TVHEAVAATGADASVIYVPPPFAADSILEAIDAEVPLIVCITEGIPVIDMIRVKRALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQTS GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPNECKIGIMPGSIFQKGSVGVVSRSGTLTYEAVFQTSAIGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELFLAD+ T+SI+M+GEIGGSAEEEAAQFL+DEAKRGRKKP+ Sbjct: 176 VGIGGDPVNGTNFIDVLELFLADDETKSIIMIGEIGGSAEEEAAQFLRDEAKRGRKKPMA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA++SGG+GGAEDKI AM+ AGI +A SP+ +G +L E+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGQGGAEDKIAAMEAAGIKVAASPSELGTTLAEVLK 293 >gi|87199203|ref|YP_496460.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Novosphingobium aromaticivorans DSM 12444] gi|87134884|gb|ABD25626.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Novosphingobium aromaticivorans DSM 12444] Length = 296 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 218/299 (72%), Positives = 253/299 (84%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNTKV+ QG+TG GTFHTEQA+ Y TQ+VGG+ P KG T G +P F Sbjct: 1 MSILVDKNTKVITQGMTGATGTFHTEQALAY-GTQMVGGVTPGKGGTTHIG----LPNFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK T A AS IYVPP A D+I+E+I+AE+ LIVCITEGIPVLDMV+VK L S Sbjct: 56 TVAEAKAATGATASCIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMVKVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQTS GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPNECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTSNIGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELFLAD+ T+SI+M+GEIGGSAEEEAAQFLKDEAKRGRKKP+V Sbjct: 176 VGIGGDPVNGTNFIDVLELFLADDETKSIIMIGEIGGSAEEEAAQFLKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA++SGG+GGAEDKI AM+EAGI ++PSP+ +G +L E+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGQGGAEDKIAAMEEAGIRVSPSPSLLGETLAEVLKE 294 >gi|260464176|ref|ZP_05812369.1| succinyl-CoA synthetase, alpha subunit [Mesorhizobium opportunistum WSM2075] gi|259029979|gb|EEW31262.1| succinyl-CoA synthetase, alpha subunit [Mesorhizobium opportunistum WSM2075] Length = 300 Score = 336 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 230/299 (76%), Positives = 271/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILVDKNTKVLVQGLTGK GTFHTEQA+ Y T++VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVDKNTKVLVQGLTGKTGTFHTEQALAYHGTKMVGGIHPKKGGETWTGSKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE K +T ANASV+YVPP+GA +AI+E+IEAEIPLI+CITEGIPV+DM++VKARL++ Sbjct: 61 ATVAEGKAKTGANASVVYVPPAGAAEAILEAIEAEIPLIICITEGIPVMDMIKVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S+SRLIGPNCPG+LTP+ CKIGIMPG+IFRKGSVG++SRSGTLTYEAVFQT+ GLGQ+T Sbjct: 121 SASRLIGPNCPGVLTPNECKIGIMPGNIFRKGSVGVVSRSGTLTYEAVFQTTNVGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SI+M+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIIMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPAR+G +LVE + Sbjct: 241 AGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIKVSPSPARLGTTLVEAIK 299 >gi|146276135|ref|YP_001166294.1| succinyl-CoA synthetase, alpha subunit [Rhodobacter sphaeroides ATCC 17025] gi|145554376|gb|ABP68989.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodobacter sphaeroides ATCC 17025] Length = 294 Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 201/299 (67%), Positives = 245/299 (81%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV++NTKV+ QG+TG GTFHTEQAI Y T++VGG+ P KG + G +PVF Sbjct: 1 MAVLVNENTKVICQGITGSQGTFHTEQAIAY-GTKMVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA++ T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++VK LE S Sbjct: 56 SVFEARDVTGANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TP +CKIGIMPG I ++GSVG++SRSGTLTYEAV QT+ GLGQS+A Sbjct: 116 KSRLIGPNCPGVITPGACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTTDLGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE+FLAD T SI+M+GEIGGSAEEEAAQFL DE KRGR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEMFLADPETTSIIMIGEIGGSAEEEAAQFLADEKKRGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA++SGGKG AE KI AMK AGI +A SPA +G ++++ LG Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGDAESKIEAMKSAGIVVADSPAHLGEAVMQALGK 294 >gi|326386304|ref|ZP_08207928.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Novosphingobium nitrogenifigens DSM 19370] gi|326209529|gb|EGD60322.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Novosphingobium nitrogenifigens DSM 19370] Length = 296 Score = 335 bits (860), Expect = 4e-90, Method: Composition-based stats. Identities = 214/298 (71%), Positives = 255/298 (85%), Gaps = 3/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+ QG+TGK GTFHT+QA+ Y TQ+VGG+ P KG + + +P++ Sbjct: 1 MSILVNKDTKVITQGMTGKTGTFHTQQALAY-GTQMVGGVTPGKGGSTH--EDTGLPIWD 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK + A ASVIYVPP A D+I+E+I+AEI LIV ITEGIPVLDMVRVK L+ S Sbjct: 58 TVAEAKAASGATASVIYVPPPFAADSILEAIDAEIELIVAITEGIPVLDMVRVKRALQGS 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP CKIGIMPGSIFRKGSVG++SRSGTLTYEAVFQTS GLGQ+TA Sbjct: 118 KSRLIGPNCPGVLTPGECKIGIMPGSIFRKGSVGVVSRSGTLTYEAVFQTSNIGLGQTTA 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELFLADE T+SI+M+GEIGG+AEE+AAQFLKDEAKRGRKKP+V Sbjct: 178 VGIGGDPVNGTNFIDVLELFLADEETKSIIMIGEIGGNAEEQAAQFLKDEAKRGRKKPMV 237 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA++SGG+GGAEDKI AM+EAGI ++PSP+ +G +L E+L Sbjct: 238 GFIAGRTAPPGRRMGHAGAIVSGGQGGAEDKIAAMEEAGIRVSPSPSLLGETLAEVLK 295 >gi|332188903|ref|ZP_08390607.1| succinate-CoA ligase, alpha subunit [Sphingomonas sp. S17] gi|332011063|gb|EGI53164.1| succinate-CoA ligase, alpha subunit [Sphingomonas sp. S17] Length = 294 Score = 335 bits (859), Expect = 5e-90, Method: Composition-based stats. Identities = 213/299 (71%), Positives = 253/299 (84%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+ QG+TG+ GTFHT+QA+ Y TQ+VGG+ P KG T G +P+F Sbjct: 1 MSILVNKNTKVITQGMTGETGTFHTQQALAY-GTQMVGGVTPGKGGTQHIG----LPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK +T A+ASVIYVPP A D+I+E+I+AEIPLIV ITEGIPVLDMV+VK L S Sbjct: 56 TVAEAKSKTGADASVIYVPPPFAADSILEAIDAEIPLIVAITEGIPVLDMVKVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQTS GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPGECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTSNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELFLAD+ T+SI+M+GEIGGSAEEEAAQFL+DEAKRGR KP+ Sbjct: 176 VGIGGDPVNGTNFIDVLELFLADDETQSIIMIGEIGGSAEEEAAQFLRDEAKRGRSKPMA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA++SGG+GGAEDKI AM+ AGI +A SP+ +G +L+ +L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGQGGAEDKIAAMEAAGIKVAASPSELGSTLLSVLNK 294 >gi|170740404|ref|YP_001769059.1| succinyl-CoA synthetase subunit alpha [Methylobacterium sp. 4-46] gi|168194678|gb|ACA16625.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium sp. 4-46] Length = 294 Score = 335 bits (859), Expect = 5e-90, Method: Composition-based stats. Identities = 224/298 (75%), Positives = 258/298 (86%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TGK GTFH+EQAI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGKNGTFHSEQAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+E T A+ASV+YVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK LE S Sbjct: 56 TVQEAREATGADASVVYVPPPGAADAICEAIQAEIPLIVCITEGIPVLDMVRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+T KIGIMP +IF+ GSVGI+SRSGTLTYEAVFQTS EGLGQ+TA Sbjct: 116 KSRLVGPNCPGIVTAGESKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTSNEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFID+LELFLADE TESIVM+GEIGGSAEEEAAQF++DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDMLELFLADEKTESIVMIGEIGGSAEEEAAQFIRDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+EAGI ++PSPAR+G++LV++L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEEAGIRVSPSPARLGKTLVDVLK 293 >gi|197103625|ref|YP_002129002.1| succinyl-CoA synthetase alpha-subunit [Phenylobacterium zucineum HLK1] gi|196477045|gb|ACG76573.1| succinyl-CoA synthetase alpha-subunit [Phenylobacterium zucineum HLK1] Length = 292 Score = 335 bits (858), Expect = 6e-90, Method: Composition-based stats. Identities = 204/298 (68%), Positives = 248/298 (83%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ K+T+V+ QG+TG GTFHTEQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSILIGKDTRVICQGITGSQGTFHTEQAIAY-GTKMVGGVTPGKGGQTHVG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + T A ASVIYVPP A D+I+E+I+AE+PLIVCITEGIPV DM++VK L S Sbjct: 56 TVAEAVKETGAEASVIYVPPPFAADSILEAIDAEVPLIVCITEGIPVTDMIKVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP CKIGIMPG+IF++GSVG++SRSGTLTYEAVFQT+Q GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPGECKIGIMPGNIFKRGSVGVVSRSGTLTYEAVFQTTQVGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVL++FL D TESI+M+GEIGGSAEE+AA+F+K+ KKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLDMFLKDPETESIIMIGEIGGSAEEDAAEFIKN---SAIKKPMV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPA++G +LVE+L Sbjct: 233 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPAKLGETLVEVLK 290 >gi|163734165|ref|ZP_02141606.1| succinyl-CoA synthase, alpha subunit [Roseobacter litoralis Och 149] gi|161392701|gb|EDQ17029.1| succinyl-CoA synthase, alpha subunit [Roseobacter litoralis Och 149] Length = 295 Score = 335 bits (858), Expect = 6e-90, Method: Composition-based stats. Identities = 198/299 (66%), Positives = 246/299 (82%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QGLTG GTFH+EQAI Y T++VGG+ P KG +++PVF Sbjct: 1 MAVLIDENTKVICQGLTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++V+ LE S Sbjct: 56 SVHEAKHATEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVQRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++GS G++SRSGTLTYEAV QT+ GLGQSTA Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGSCGVVSRSGTLTYEAVKQTTDLGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE+FLAD T+SI+M+GEIGGSAEE+AAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEMFLADPETQSIIMIGEIGGSAEEDAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI+AM+ AGI +A SPA +G ++ E + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIDAMRAAGIVVADSPATLGEAVQEAIAK 294 >gi|255261782|ref|ZP_05341124.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Thalassiobium sp. R2A62] gi|255104117|gb|EET46791.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Thalassiobium sp. R2A62] Length = 293 Score = 335 bits (858), Expect = 6e-90, Method: Composition-based stats. Identities = 198/298 (66%), Positives = 245/298 (82%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG +++PVF Sbjct: 1 MAILIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 + EA E T ANA+VIYVPP A D+I+E+++AEIP I CITEGIPVLDM++VK LE S Sbjct: 56 SCHEAVETTGANATVIYVPPPFAADSILEALDAEIPFICCITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SS LIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QT+ GLGQSTA Sbjct: 116 SSILIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTTDSGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ T+SI+M+GEIGGSAEEEAAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLERFLADDETQSIIMIGEIGGSAEEEAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AM+ AG+ +A SPA +G +++E +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMRSAGVVVAESPAGLGEAVLEAIG 293 >gi|149913127|ref|ZP_01901661.1| dihydrolipoamide acetyltransferase [Roseobacter sp. AzwK-3b] gi|149813533|gb|EDM73359.1| dihydrolipoamide acetyltransferase [Roseobacter sp. AzwK-3b] Length = 294 Score = 335 bits (858), Expect = 6e-90, Method: Composition-based stats. Identities = 196/298 (65%), Positives = 242/298 (81%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QGLTG GTFHTEQAI Y T++VGG+ P KG +++PVF Sbjct: 1 MAVLIDENTKVICQGLTGSQGTFHTEQAIAY-GTKMVGGVTPGKGGQTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ +IVCITEGIPVLDM+RVK LE S Sbjct: 56 SVHEAKHATDANASVIYVPPPFAADSILEAIDAEMEVIVCITEGIPVLDMMRVKRALETS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++G VG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGKVGVVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TE+I+M+GEIGGSAEE+AA FL E K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETEAIIMIGEIGGSAEEDAAAFLASERKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGA+DKI AMK AGI +A SPA +G +++ + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGADDKIEAMKSAGITVAESPASLGEAVLTAIK 293 >gi|329891083|ref|ZP_08269426.1| succinyl-CoA ligase ADP-forming subunit alpha [Brevundimonas diminuta ATCC 11568] gi|328846384|gb|EGF95948.1| succinyl-CoA ligase ADP-forming subunit alpha [Brevundimonas diminuta ATCC 11568] Length = 300 Score = 335 bits (858), Expect = 7e-90, Method: Composition-based stats. Identities = 222/299 (74%), Positives = 267/299 (89%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TK+LVQGLTGK G FHTEQA+ Y T++VGG+HP KG WTG + +P+F Sbjct: 1 MSILVNKDTKILVQGLTGKTGGFHTEQALAYYNTKMVGGVHPTKGGQTWTGSHGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE KERT A+A+VIYVPP+GA DAIIE+I+AEIP I CITEGIPV DMVRVKARL++ Sbjct: 61 ASVAEGKERTGADATVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVQDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S+SRL+GPNCPG+LTP+ CKIGIMPG+IF+KG+VGI+SRSGTLTYEAVFQT+ EGLGQ+T Sbjct: 121 SNSRLLGPNCPGVLTPEECKIGIMPGNIFKKGNVGIVSRSGTLTYEAVFQTTNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ATESI+M+GEIGG+AEE+AAQFL DEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDATESIIMIGEIGGAAEEDAAQFLIDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G +LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMEAAGIRVSPSPARLGATLVEVLK 299 >gi|89053318|ref|YP_508769.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Jannaschia sp. CCS1] gi|88862867|gb|ABD53744.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Jannaschia sp. CCS1] Length = 293 Score = 334 bits (857), Expect = 8e-90, Method: Composition-based stats. Identities = 200/298 (67%), Positives = 245/298 (82%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD+NTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG +++PVF Sbjct: 1 MAVLVDENTKVICQGFTGSQGTFHSEQAIEY-GTQMVGGVTPGKGGMTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+ T ANASVIYVPP A D+I+E+I+AE+ LI+CITEGIPVLDM+RVK LE S Sbjct: 56 SVHEARHVTDANASVIYVPPPFAADSILEAIDAEMELIICITEGIPVLDMMRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SS L+GPNCPG++TPD+CKIGIMPG I ++GS G++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 SSILVGPNCPGVITPDACKIGIMPGHIHKRGSCGVVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TESI+M+GEIGGSAEEEAAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AMK AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIVVADSPATLGEAVLQAIG 293 >gi|16124593|ref|NP_419157.1| succinyl-CoA synthetase subunit alpha [Caulobacter crescentus CB15] gi|221233280|ref|YP_002515716.1| succinyl-CoA synthetase subunit alpha [Caulobacter crescentus NA1000] gi|13421487|gb|AAK22325.1| succinyl-CoA synthetase, alpha subunit [Caulobacter crescentus CB15] gi|220962452|gb|ACL93808.1| succinyl-CoA synthetase alpha chain [Caulobacter crescentus NA1000] Length = 294 Score = 334 bits (857), Expect = 9e-90, Method: Composition-based stats. Identities = 222/298 (74%), Positives = 260/298 (87%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+ +TKV+ QG+TG GTFHTEQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLIGSHTKVICQGITGAQGTFHTEQAIAY-GTQMVGGVTPGKGGQTHIG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK+RT A+ASVIYVPP A D+I+E+IEAEIPLIVCITEGIPVLDMV+VK L+ S Sbjct: 56 TVAEAKDRTGADASVIYVPPPFAADSILEAIEAEIPLIVCITEGIPVLDMVKVKKALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP CKIGIMPGSIF +GSVG++SRSGTLTYEAVFQT+ GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPKQCKIGIMPGSIFSEGSVGVVSRSGTLTYEAVFQTTNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLADEAT+SIVM+GEIGGSAEEEAAQFLKDEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADEATKSIVMIGEIGGSAEEEAAQFLKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA++SGGKGGAEDKI AM++AGI ++PSPA++G +L+E+L Sbjct: 236 GFIAGRTAPPGRHMGHAGAIVSGGKGGAEDKIAAMEDAGIRVSPSPAKLGETLLEVLK 293 >gi|254510907|ref|ZP_05122974.1| succinyl-CoA synthase, alpha subunit [Rhodobacteraceae bacterium KLH11] gi|221534618|gb|EEE37606.1| succinyl-CoA synthase, alpha subunit [Rhodobacteraceae bacterium KLH11] Length = 293 Score = 334 bits (857), Expect = 9e-90, Method: Composition-based stats. Identities = 198/298 (66%), Positives = 248/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T +VGG+ P KG ++++PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGM----EHLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+A + +IVCITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKAVTEANASVIYVPPPFAADSILEAIDARMEVIVCITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRL+GPNCPG++TP +CKIGIMPG I ++GSVG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 NSRLVGPNCPGVITPGACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ T SI+M+GEIGGSAEEEAAQFL DEAK+GRKKP+ Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETTSIIMIGEIGGSAEEEAAQFLADEAKKGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AM+ AGI +A SPA++G +++E +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMRAAGIVVAESPAQLGEAVLEAIG 293 >gi|110678917|ref|YP_681924.1| succinyl-CoA synthase, alpha subunit [Roseobacter denitrificans OCh 114] gi|109455033|gb|ABG31238.1| succinyl-CoA synthase, alpha subunit [Roseobacter denitrificans OCh 114] Length = 295 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 198/299 (66%), Positives = 245/299 (81%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QGLTG GTFH+EQAI Y T++VGG+ P KG +++PVF Sbjct: 1 MAVLIDENTKVICQGLTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++V+ LE S Sbjct: 56 SVHEAKHATEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVQRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++GS G++SRSGTLTYEAV QT+ GLGQSTA Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGSCGVVSRSGTLTYEAVKQTTDLGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE+FLAD T SI+M+GEIGGSAEE+AAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEMFLADPETTSIIMIGEIGGSAEEDAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI+AM+ AGI +A SPA +G ++ E + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIDAMRAAGIVVADSPATLGEAVQEAIAK 294 >gi|319790380|ref|YP_004152013.1| succinyl-CoA synthetase, alpha subunit [Thermovibrio ammonificans HB-1] gi|317114882|gb|ADU97372.1| succinyl-CoA synthetase, alpha subunit [Thermovibrio ammonificans HB-1] Length = 300 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 172/301 (57%), Positives = 224/301 (74%), Gaps = 7/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN--VNVPV 58 MS+L+DKNTKV+VQGLTGK G+FH +Q + Y TQ+V G+ P KG WT VPV Sbjct: 1 MSVLIDKNTKVVVQGLTGKEGSFHAKQCLDY-GTQIVAGVTPGKGGMTWTDDEGKYKVPV 59 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV EA + T ANAS+I+VPP+ A DAI+E+ +A I LIVCITEGIPV DMV+VK LE Sbjct: 60 FNTVEEAVKETGANASLIFVPPAFAADAIMEAADAGIKLIVCITEGIPVNDMVKVKRALE 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + R +GPNCPG++TP+ CK+GIMPG IF+KG VGI+SRSGTLTYEA +Q + G+GQS Sbjct: 120 GTGVRYVGPNCPGVITPEECKMGIMPGHIFKKGRVGIVSRSGTLTYEAAYQLTSRGIGQS 179 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDPV GT + +E+F D T++IV++GEIGG+ EEEAA+++K+ KKP Sbjct: 180 TVIGIGGDPVPGTTHREAVEMFNNDPETDAIVLIGEIGGTMEEEAAEYIKEHV----KKP 235 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V ++AG TAPPGR MGHAGA+ISGGKG A+ K+ A++EAG + +PA IG + + L Sbjct: 236 VVAYIAGVTAPPGRRMGHAGAIISGGKGDAKSKMEALREAGAYVCNTPAEIGEMVEKALK 295 Query: 299 S 299 Sbjct: 296 E 296 >gi|89068135|ref|ZP_01155552.1| succinyl-CoA synthase, alpha subunit [Oceanicola granulosus HTCC2516] gi|89046374|gb|EAR52431.1| succinyl-CoA synthase, alpha subunit [Oceanicola granulosus HTCC2516] Length = 293 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 202/298 (67%), Positives = 249/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+ TKV+ QGLTG GTFH+EQAI Y T++VGG+ P KG +++PVF Sbjct: 1 MAVLIDETTKVICQGLTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+ T ANASVIYVPP A D+I+E+I+A++ LIVCITEGIPVLDM+RVK LE S Sbjct: 56 SVHEARAATEANASVIYVPPPFAADSILEAIDAQMELIVCITEGIPVLDMMRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +S LIGPNCPG++TPD+CKIGIMPG I ++G+VG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 ASVLIGPNCPGVITPDACKIGIMPGHIHKRGTVGVVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TESI+M+GEIGGSAEEEAAQFLKDEAKRGR KP+ Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLKDEAKRGRTKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AMK AGI +A SPA +G +++E +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIVVADSPATLGEAVLEAIG 293 >gi|56695261|ref|YP_165609.1| succinyl-CoA synthase, alpha subunit [Ruegeria pomeroyi DSS-3] gi|56676998|gb|AAV93664.1| succinyl-CoA synthase, alpha subunit [Ruegeria pomeroyi DSS-3] Length = 294 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 205/299 (68%), Positives = 251/299 (83%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGMEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANA+VIYVPP A D+I+E+I+A++ +IVCITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKHVTEANATVIYVPPPFAADSILEAIDAQMEVIVCITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQSTA Sbjct: 116 SSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDIGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TESI+M+GEIGGSAEEEAAQFLKDEAK+GRKKP+ Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLKDEAKKGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AM+ AGI +A SPA +G +++E +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMRSAGIVVADSPATLGEAVLEAIGK 294 >gi|126734827|ref|ZP_01750573.1| succinyl-CoA synthetase, alpha subunit [Roseobacter sp. CCS2] gi|126715382|gb|EBA12247.1| succinyl-CoA synthetase, alpha subunit [Roseobacter sp. CCS2] Length = 293 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 194/298 (65%), Positives = 245/298 (82%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV++NT+V+ QGLTG GTFH+EQAI Y T++VGG+ P KG +++P+F Sbjct: 1 MAILVNENTRVICQGLTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTH----LDLPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA +T ANASVIYVPP A D+I+E+I+AE+ LI+CITEGIPVLDM+RVK LE S Sbjct: 56 SVHEAMAKTEANASVIYVPPPFAADSILEAIDAEMELIICITEGIPVLDMMRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQSTA Sbjct: 116 TSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDSGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVL++FL D+ T S++M+GEIGGSAEEEAA+FL + K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLDMFLDDDETHSMIMIGEIGGSAEEEAAEFLTAQKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMK AGI +A SPA +G +++E +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEAMKSAGIVVADSPATLGEAVLEAIG 293 >gi|254467250|ref|ZP_05080661.1| succinyl-CoA synthase, alpha subunit [Rhodobacterales bacterium Y4I] gi|206688158|gb|EDZ48640.1| succinyl-CoA synthase, alpha subunit [Rhodobacterales bacterium Y4I] Length = 294 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 201/299 (67%), Positives = 247/299 (82%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG +N+PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANA+VIYVPP A D+I+E+I+AE+ +IV ITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKHVTEANATVIYVPPPFAADSILEAIDAEMEVIVAITEGIPVLDMMKVKRALENS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++TPD+CKIGIMPG I R+GSVG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSTLIGPNCPGVITPDACKIGIMPGHIHRRGSVGVVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TESI+M+GEIGGSAEEEAAQFLKDEAK+GR KP+ Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLKDEAKKGRSKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AMK AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIVVAESPAGLGEAVLKAIGK 294 >gi|329847466|ref|ZP_08262494.1| succinyl-CoA ligase ADP-forming subunit alpha [Asticcacaulis biprosthecum C19] gi|328842529|gb|EGF92098.1| succinyl-CoA ligase ADP-forming subunit alpha [Asticcacaulis biprosthecum C19] Length = 295 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 211/300 (70%), Positives = 252/300 (84%), Gaps = 5/300 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++ TKV+ QGLTG GTFHTEQAI Y T++VGG+ P KG G +PV+ Sbjct: 1 MSVLINSETKVICQGLTGSQGTFHTEQAIAY-GTKMVGGVTPGKGGQTHVG----LPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK+RT A A+ IYVPP A D+I+E+IEAE+ LIVCITEGIPVLDMV+VK L+ S Sbjct: 56 TVAEAKDRTGATATAIYVPPPFAADSILEAIEAEMELIVCITEGIPVLDMVKVKKALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP+ CKIGIMPG+IF GSVG++SRSGTLTYEAVFQT+ GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPNQCKIGIMPGNIFSPGSVGVVSRSGTLTYEAVFQTTNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD+AT+SI+M+GEIGG AEE+AAQFL+DEAKRGR KP+ Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADDATKSIIMIGEIGGQAEEDAAQFLRDEAKRGRIKPMA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI +APSPA +G +L+ +L L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVAPSPAALGETLLNVLKGL 295 >gi|218288279|ref|ZP_03492578.1| succinyl-CoA synthetase, alpha subunit [Alicyclobacillus acidocaldarius LAA1] gi|218241638|gb|EED08811.1| succinyl-CoA synthetase, alpha subunit [Alicyclobacillus acidocaldarius LAA1] Length = 299 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 181/299 (60%), Positives = 229/299 (76%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K T+V+ QG+TG AG FHT+QA+ Y T+VVGG P KG T G +PVF Sbjct: 1 MSILVNKETRVITQGITGSAGLFHTQQALAY-GTKVVGGTSPGKGGTKVEG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T ANASVIYVPP+ A DAI+E++ A + L+VCITEGIP+ DMV+VK +E Sbjct: 56 TVEEAVRETGANASVIYVPPAFAADAIMEAVAAGLELVVCITEGIPIFDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I G +G++SRSGTLTYEAV+Q +Q GLGQSTA Sbjct: 116 KTRLIGPNCPGVITPNECKIGIMPGYIHTPGKIGVVSRSGTLTYEAVYQLTQLGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+DVL++F D TE+++M+GEIGGSAEEEAA+++K KKP+V Sbjct: 176 VGIGGDPVNGTNFVDVLKMFNDDPDTEAVIMIGEIGGSAEEEAAEWIKANM----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA++SGG G A+ KI MKE GI +AP+P+ +G +L ++L Sbjct: 232 GFIAGATAPPGRRMGHAGAIVSGGSGTAQSKIEKMKECGIRVAPTPSEMGSTLYQVLEE 290 >gi|94496915|ref|ZP_01303489.1| succinyl-CoA synthetase, alpha subunit [Sphingomonas sp. SKA58] gi|94423591|gb|EAT08618.1| succinyl-CoA synthetase, alpha subunit [Sphingomonas sp. SKA58] Length = 294 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 217/298 (72%), Positives = 252/298 (84%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+ QG+TG GTFHTEQA+ Y TQ+V G+ P KG T G +P+F Sbjct: 1 MSILVNKNTKVITQGMTGATGTFHTEQALAY-GTQMVAGVTPGKGGTSHIG----LPMFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK +T A+ASVIYVPP A D+I+E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVAEAKSKTGADASVIYVPPPFAADSILEAIDAEIPLIVCITEGIPVLDMVRVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTPD CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQTS GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPDECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTSNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELFLAD+ATESI+M+GEIGG AEE+AAQFL DEAK+GRKKP+ Sbjct: 176 VGIGGDPVNGTNFIDVLELFLADDATESIIMIGEIGGDAEEQAAQFLIDEAKKGRKKPMA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA++SGGKG AE KI AM+ AGI +A SP+ +G +LVE+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGDAESKIAAMEAAGIKVAASPSELGSTLVEVLK 293 >gi|83944437|ref|ZP_00956891.1| Succinyl-CoA synthetase, alpha subunit [Sulfitobacter sp. EE-36] gi|83844760|gb|EAP82643.1| Succinyl-CoA synthetase, alpha subunit [Sulfitobacter sp. EE-36] Length = 295 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 197/299 (65%), Positives = 244/299 (81%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV++NTKV+ QGLTG GTFHTEQAI Y T++VGG+ P KG +++PVF Sbjct: 1 MAVLVNENTKVICQGLTGSQGTFHTEQAIAY-GTKMVGGVTPGKGGQTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+ T ANA+VIYVPP A D+I+E+I+AE+ LI+CITEGIPVLDM+RVK LE S Sbjct: 56 SVHEARHVTEANATVIYVPPPFAADSILEAIDAEMELIICITEGIPVLDMMRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++G+ G++SRSGTLTYEAV QTS GLGQS+A Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGTCGVVSRSGTLTYEAVKQTSDLGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KG+E ID+LE+FLAD TESI+M+GEIGGSAEEEAAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGSEHIDILEMFLADPETESIIMIGEIGGSAEEEAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMKEAGI +A SPA +G ++ E + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIAAMKEAGIVVADSPATLGEAVQEAINK 294 >gi|295691152|ref|YP_003594845.1| succinyl-CoA synthetase subunit alpha [Caulobacter segnis ATCC 21756] gi|295433055|gb|ADG12227.1| succinyl-CoA synthetase, alpha subunit [Caulobacter segnis ATCC 21756] Length = 294 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 220/298 (73%), Positives = 258/298 (86%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+ +TKV+ QG+TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLIGSHTKVICQGITGAQGTFHSEQAIAY-GTKMVGGVTPGKGGQTHIG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAKE T A+ASVIYVPP A D+I+E+IEAEIPLIVCITEGIPVLDMV+VK L+ S Sbjct: 56 TVIEAKEATGADASVIYVPPPFAADSILEAIEAEIPLIVCITEGIPVLDMVKVKKALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP CKIGIMPGSIF KGSVG++SRSGTLTYEAVFQT+ GLGQ+TA Sbjct: 116 RSRLIGPNCPGVLTPGECKIGIMPGSIFSKGSVGVVSRSGTLTYEAVFQTTNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLADEAT+SIVM+GEIGGSAEEEAAQFLKDEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADEATKSIVMIGEIGGSAEEEAAQFLKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA++SGGKGGAEDKI AM++AGI ++PSPA++G +L+E+L Sbjct: 236 GFIAGRTAPPGRHMGHAGAIVSGGKGGAEDKIAAMEDAGIRVSPSPAKLGETLLEVLK 293 >gi|163744280|ref|ZP_02151640.1| succinyl-CoA synthase, alpha subunit [Oceanibulbus indolifex HEL-45] gi|161381098|gb|EDQ05507.1| succinyl-CoA synthase, alpha subunit [Oceanibulbus indolifex HEL-45] Length = 295 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 201/299 (67%), Positives = 243/299 (81%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV++NTKV+ QGLTG GTFHTEQAI Y T++VGG+ P KG +++PVF Sbjct: 1 MAVLVNENTKVICQGLTGSQGTFHTEQAIAY-GTKMVGGVTPGKGGQTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM RV L+ S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMARVARALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I R+GSVG++SRSGTLTYEAV QT+ GLGQS+A Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHRRGSVGVVSRSGTLTYEAVKQTTDMGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE+FLAD T+SI+M+GEIGGSAEEEAAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEMFLADPETQSIIMIGEIGGSAEEEAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMKEAGI +A SPA +G ++ E + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEAMKEAGIVVADSPATLGEAVKEAIDK 294 >gi|239826602|ref|YP_002949226.1| succinyl-CoA synthetase subunit alpha [Geobacillus sp. WCH70] gi|239806895|gb|ACS23960.1| succinyl-CoA synthetase, alpha subunit [Geobacillus sp. WCH70] Length = 300 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 185/299 (61%), Positives = 234/299 (78%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K+TKV+VQG+TG G FHT+Q + Y T++VGG+ P KG T G VPVF Sbjct: 1 MSIFINKDTKVIVQGITGSQGLFHTKQMLEY-GTKIVGGVTPGKGGTEVEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA E+T ANASVIYVPP+ A DAI+E+++AE+ L+VCITEGIPVLDMV+VK +E Sbjct: 56 TVSEAVEKTGANASVIYVPPAFAADAIMEAVDAELDLVVCITEGIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +Q G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T +++M+GEIGG+AEEEAA+++K KKP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDEETYAVIMIGEIGGTAEEEAAEWVKANM----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI M E GI +A +PA IG +L+ +L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKKMNECGIKVAETPAVIGETLISVLKE 290 >gi|85058857|ref|YP_454559.1| succinyl-CoA synthetase subunit alpha [Sodalis glossinidius str. 'morsitans'] gi|84779377|dbj|BAE74154.1| succinyl-CoA synthase alpha subunit [Sodalis glossinidius str. 'morsitans'] Length = 290 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 177/299 (59%), Positives = 224/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQALAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VKA+LE+S Sbjct: 56 TVREAVDKTGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLTVKAKLEQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYE V QT+ GLGQS+ Sbjct: 116 KARMIGPNCPGVITPGECKIGIMPGHIHQPGRVGIVSRSGTLTYEVVKQTTDTGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+G KG A++K A++ AG+ S A IG +L +L + Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGSKGTADEKFAALEAAGVKTVRSLADIGEALKFILPN 290 >gi|258511358|ref|YP_003184792.1| succinyl-CoA synthetase, alpha subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478084|gb|ACV58403.1| succinyl-CoA synthetase, alpha subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 299 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 182/299 (60%), Positives = 229/299 (76%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K T+V+ QG+TG AG FHT+QA+ Y T+VVGG P KG T G +PVF Sbjct: 1 MSILVNKETRVITQGITGSAGLFHTQQALAY-GTKVVGGTSPGKGGTKVEG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T ANASVIYVPP+ A DAI+E++ A I L+VCITEGIP+LDMV+VK +E Sbjct: 56 TVEEAVRETGANASVIYVPPAFAADAIMEAVAAGIELVVCITEGIPILDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I G +G++SRSGTLTYEAV+Q +Q GLGQSTA Sbjct: 116 KTRLIGPNCPGVITPNECKIGIMPGYIHTPGKIGVVSRSGTLTYEAVYQLTQLGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+DVL++F D TE+++M+GEIGGSAEEEAA+++K KKP+V Sbjct: 176 VGIGGDPVNGTNFVDVLKMFNDDPDTEAVIMIGEIGGSAEEEAAEWIKANM----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA++SGG G A+ KI MK GI +AP+P+ +G +L ++L Sbjct: 232 GFIAGATAPPGRRMGHAGAIVSGGSGTAQSKIEKMKACGIRVAPTPSEMGSTLYQVLEE 290 >gi|16510|emb|CAA48891.1| succinate--CoA ligase (GDP-forming) [Arabidopsis thaliana] Length = 345 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 182/298 (61%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT+V+ QG+TGK GTFHTEQAI Y T++V G+ PKKG T G +PVF TV Sbjct: 51 VFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVAGVTPKKGGTEHLG----LPVFNTV 105 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSS 121 AEAK T ANASVIYVP A AI+E + AE+ LIVCITEGIP DMVRVKA L +S Sbjct: 106 AEAKAETKANASVIYVPAPFAAAAIMEGLAAELDLIVCITEGIPQHDMVRVKAALNSQSK 165 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 166 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTCV 225 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D LE F D TE IV++GEIGG+AEE+AA +K+ G KP+V Sbjct: 226 GIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIKEN---GTDKPVVA 282 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAG ++SGGKG A+DKI ++++AG+ + SPA++G ++ EL Sbjct: 283 FIAGLTAPPGRRMGHAGRIVSGGKGTAQDKIKSLRDAGVKVVESPAKLGAAMFELFQE 340 >gi|159045422|ref|YP_001534216.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Dinoroseobacter shibae DFL 12] gi|157913182|gb|ABV94615.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Dinoroseobacter shibae DFL 12] Length = 293 Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 199/298 (66%), Positives = 247/298 (82%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG +N+PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANA+VIYVPP A D+I+E+I+AE+ +IVCITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKAVTEANATVIYVPPPFAADSILEAIDAEMEVIVCITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPG++TPD+CKIGIMPG I ++G+VG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 ASRLIGPNCPGVITPDACKIGIMPGHIHKRGTVGVVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE FLAD+ TESI+M+GEIGGSAEEEAAQFL DE KRGR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLADEKKRGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AM+ AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMQSAGIVVAESPAGLGEAVLKAIG 293 >gi|83953478|ref|ZP_00962200.1| Succinyl-CoA synthetase, alpha subunit [Sulfitobacter sp. NAS-14.1] gi|83842446|gb|EAP81614.1| Succinyl-CoA synthetase, alpha subunit [Sulfitobacter sp. NAS-14.1] Length = 295 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 196/299 (65%), Positives = 244/299 (81%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV++NTKV+ QGLTG GTFHTEQAI Y T++VGG+ P KG +++PVF Sbjct: 1 MAVLVNENTKVICQGLTGSQGTFHTEQAIAY-GTKMVGGVTPGKGGQTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+ T ANA+VIYVPP A D+I+E+I+AE+ LI+CITEGIPVLDM+RVK LE S Sbjct: 56 SVHEARHVTEANATVIYVPPPFAADSILEAIDAEMELIICITEGIPVLDMMRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++G+ G++SRSGTLTYEAV QTS GLGQS+A Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGTCGVVSRSGTLTYEAVKQTSDLGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KG+E ID+LE+FLAD T+SI+M+GEIGGSAEEEAAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGSEHIDILEMFLADPETQSIIMIGEIGGSAEEEAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMKEAGI +A SPA +G ++ E + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIAAMKEAGIVVADSPATLGEAVQEAINK 294 >gi|315497283|ref|YP_004086087.1| succinyl-CoA synthetase, alpha subunit [Asticcacaulis excentricus CB 48] gi|315415295|gb|ADU11936.1| succinyl-CoA synthetase, alpha subunit [Asticcacaulis excentricus CB 48] Length = 294 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 216/298 (72%), Positives = 253/298 (84%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++ TKV+ QG TG GTFH+EQAI Y T+VVGG+ P KG T G +PVF Sbjct: 1 MSVLINSQTKVITQGFTGAQGTFHSEQAIAY-GTKVVGGVTPGKGGTTHIG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEAKERT A+AS IYVPP A DAI+E+IEAEIPLIVCITEGIPVLDMV+VK L S Sbjct: 56 SVAEAKERTGADASAIYVPPPFAADAILEAIEAEIPLIVCITEGIPVLDMVKVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP+ CKIGIMPG+IF KGSVG++SRSGTLTYEAVFQT+ GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPNECKIGIMPGNIFSKGSVGVVSRSGTLTYEAVFQTTNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD+ T+SI+M+GEIGGSAEE+AAQFL DEAKRGRKKP+ Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADDETKSIIMIGEIGGSAEEDAAQFLIDEAKRGRKKPMA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPA +G +L+ +L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIKVSPSPAALGETLLSVLK 293 >gi|330829378|ref|YP_004392330.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Aeromonas veronii B565] gi|328804514|gb|AEB49713.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Aeromonas veronii B565] Length = 290 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+V+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTRVICQGFTGGQGTFHSEQALSY-GTQLVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+A I LIV ITEGIP LDM+ VK +L+++ Sbjct: 56 TVRDAVEATGATASVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTLDMLDVKVKLQET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGG+AEE+AA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFQNDPQTEAIVMIGEIGGNAEEDAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A +K A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAAEKFAALEDAGVKTVRSLADIGKALREVTG 289 >gi|158425638|ref|YP_001526930.1| succinyl-CoA ligase alpha subunit [Azorhizobium caulinodans ORS 571] gi|158332527|dbj|BAF90012.1| succinyl-CoA ligase alpha subunit [Azorhizobium caulinodans ORS 571] Length = 295 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 224/298 (75%), Positives = 258/298 (86%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+D NTKV+ QG TGK GTFH+EQAI Y T+VVGG P KG + G +PVF Sbjct: 2 MSVLIDANTKVITQGFTGKNGTFHSEQAIAY-GTKVVGGTSPGKGGSTHLG----LPVFD 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+E+T A+ASVIYVPP GA DAI+E+I+AEIPLIVCITEGIPVLDMV+VK L S Sbjct: 57 TVIEAREKTGADASVIYVPPPGAADAILEAIDAEIPLIVCITEGIPVLDMVKVKRALSGS 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T KIGIMP +IF+ GSVGI+SRSGTLTYEAVFQTSQEGLGQ++A Sbjct: 117 KSRLIGPNCPGVVTAGQSKIGIMPANIFKTGSVGIVSRSGTLTYEAVFQTSQEGLGQTSA 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLELFLAD TESIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+V Sbjct: 177 VGIGGDPVKGTEFIDVLELFLADPKTESIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPMV 236 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+EAGI ++PSPAR+G++LVE+L Sbjct: 237 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEEAGIRVSPSPARLGKTLVEVLK 294 >gi|154251906|ref|YP_001412730.1| succinyl-CoA synthetase subunit alpha [Parvibaculum lavamentivorans DS-1] gi|154155856|gb|ABS63073.1| succinyl-CoA synthetase, alpha subunit [Parvibaculum lavamentivorans DS-1] Length = 291 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 198/298 (66%), Positives = 238/298 (79%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG + ++++PVF Sbjct: 1 MSVLVDKNTKVICQGFTGNQGTFHSEQAIAY-GTKMVGGVSPGKGGS----KHLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+T A AS IYVPP A DAI+E+I+A I L VCITEGIPVLDMV+VK L+ S Sbjct: 56 TVAEAVEKTGATASAIYVPPPFAADAILEAIDAGIELAVCITEGIPVLDMVKVKRALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RL+GPNCPG++TPD CKIGIMPG I + GSVGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 NTRLVGPNCPGVITPDECKIGIMPGHIHKPGSVGIVSRSGTLTYEAVAQTTAAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT FID LE+FL D T SI+M+GEIGGSAEE+AA+FLK KKPIV Sbjct: 176 IGIGGDPVNGTNFIDCLEMFLGDPDTTSIIMIGEIGGSAEEDAAEFLKA---SKVKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAPPGR MGHAGA+ISGGKGGAEDK+ AM+ AGI +A SP+ +G +LVE+L Sbjct: 233 GFIAGVTAPPGRRMGHAGAIISGGKGGAEDKMEAMRSAGITVAKSPSALGTTLVEVLK 290 >gi|85709013|ref|ZP_01040079.1| succinyl-CoA synthetase, alpha subunit [Erythrobacter sp. NAP1] gi|85690547|gb|EAQ30550.1| succinyl-CoA synthetase, alpha subunit [Erythrobacter sp. NAP1] Length = 296 Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats. Identities = 202/300 (67%), Positives = 245/300 (81%), Gaps = 5/300 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+ QG+TG GTFHT+QA+ Y T++V G+ P KG T G +P F Sbjct: 1 MSILVNKDTKVITQGMTGNTGTFHTQQALDY-GTKMVAGVTPGKGGTEHIG----LPQFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAKE T A AS IYVPP A DAI E+I+AE+ LI+CITEGIPVLDMVR KA L S Sbjct: 56 TVREAKEATGATASCIYVPPPFAADAICEAIDAEMELIICITEGIPVLDMVRAKAALTGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAV QT+Q GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPEECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVHQTTQVGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+LFL D T+SI+M+GEIGGSAEEEAA+F+K EA +GR KP V Sbjct: 176 VGIGGDPVNGTNFIDVLDLFLDDPETKSIIMIGEIGGSAEEEAAEFIKQEAAKGRSKPTV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAPPGR MGHAGA++SGG+GGA+DKI AM++AGI ++PSP+ +G +L +L + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGQGGADDKIAAMEDAGIRVSPSPSELGTTLDAMLKEM 295 >gi|75150501|sp|Q8GTQ9|SUCA1_SOLLC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial; Short=SlSCoALalpha1; Flags: Precursor gi|27357175|gb|AAN86619.1| succinyl-CoA ligase alpha 1 subunit [Solanum lycopersicum] Length = 332 Score = 331 bits (850), Expect = 5e-89, Method: Composition-based stats. Identities = 190/298 (63%), Positives = 230/298 (77%), Gaps = 9/298 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF T Sbjct: 38 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNT 92 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS- 120 V EAK T ANASVIYVPP A AI+E +EAE+ LIVCITEGIP DMVRVKA L+K Sbjct: 93 VEEAKAETKANASVIYVPPPFAAAAIMEGLEAELDLIVCITEGIPQHDMVRVKAALKKQS 152 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 153 RTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTC 212 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+AD TE IV++GEIGG+AEE+AA +K+ G +KP+V Sbjct: 213 VGIGGDPFNGTNFVDCLEKFIADPQTEGIVLIGEIGGTAEEDAAALIKE---SGTQKPVV 269 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA++SGGKG A+DKI A+KEAG+ + SPA+IG S++E+ Sbjct: 270 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALKEAGVTVCESPAKIGVSMLEVFK 327 >gi|85711260|ref|ZP_01042319.1| Succinyl-CoA synthetase, alpha subunit [Idiomarina baltica OS145] gi|85694761|gb|EAQ32700.1| Succinyl-CoA synthetase, alpha subunit [Idiomarina baltica OS145] Length = 290 Score = 331 bits (850), Expect = 5e-89, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+IIE+ +A I LIVCITEGIP LDM+ VK L Sbjct: 56 TVKEAVEATGATASVIYVPAPFCKDSIIEAADAGIELIVCITEGIPTLDMLYVKEYLTHK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LELF D TE+IVM+GEIGG+AEEEAA+++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILELFEKDPETEAIVMIGEIGGTAEEEAAEYIKNHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+I+GGKG A++K A++ AG+ S A IG+++ E G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGKAVREKTG 289 >gi|149183633|ref|ZP_01862050.1| succinyl-CoA synthetase subunit alpha [Bacillus sp. SG-1] gi|148848650|gb|EDL62883.1| succinyl-CoA synthetase subunit alpha [Bacillus sp. SG-1] Length = 300 Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 179/299 (59%), Positives = 230/299 (76%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+TKV+VQG+TG FHT+Q + Y TQ+V G+ P KG T G VPVF Sbjct: 1 MSVFINKDTKVIVQGITGSTALFHTKQMLEY-GTQIVAGVTPGKGGTEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK+ T ANASVIYVP A DAI+E+++AE+ L +CITE IPVLDMV+VK +E Sbjct: 56 TVEEAKKETGANASVIYVPAPFAADAILEAVDAELDLAICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I KG VG++SRSGTLTYEAV Q SQEG+GQSTA Sbjct: 116 KTRLVGPNCPGVITPDECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLSQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FIDVL+ F DE T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTDFIDVLKAFNEDEDTYAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI M E GI +AP+P+ +G +L+++L Sbjct: 232 GFIGGRTAPPGKRMGHAGAIISGGKGTADEKIRVMNECGIEVAPTPSDMGETLIKVLKD 290 >gi|254361865|ref|ZP_04977999.1| succinate--CoA ligase (ADP-forming) [Mannheimia haemolytica PHL213] gi|261492659|ref|ZP_05989212.1| succinyl-CoA synthetase alpha subunit [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494592|ref|ZP_05991073.1| succinyl-CoA synthetase alpha subunit [Mannheimia haemolytica serotype A2 str. OVINE] gi|153093404|gb|EDN74395.1| succinate--CoA ligase (ADP-forming) [Mannheimia haemolytica PHL213] gi|261309704|gb|EEY10926.1| succinyl-CoA synthetase alpha subunit [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311818|gb|EEY12968.1| succinyl-CoA synthetase alpha subunit [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 289 Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 182/298 (61%), Positives = 228/298 (76%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP G DAI+E+I+A I LIVCITEGIP LDM++VK RL ++ Sbjct: 56 TVREAVEATGATATVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMLQVKQRLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG+I +KG++GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGNIHKKGNIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQDDPETEAIVMIGEIGGSAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K +++AG+ S A IG +L ++LG Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFKILEDAGVTTVRSLAEIGSALRKILG 289 >gi|295696102|ref|YP_003589340.1| succinyl-CoA synthetase, alpha subunit [Bacillus tusciae DSM 2912] gi|295411704|gb|ADG06196.1| succinyl-CoA synthetase, alpha subunit [Bacillus tusciae DSM 2912] Length = 305 Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 187/299 (62%), Positives = 232/299 (77%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD+NTKV+ QG+TG G FHT+QA+ Y T+VV G+ P KG T G VPVF Sbjct: 1 MSILVDRNTKVVTQGITGSTGLFHTKQALEY-GTKVVAGVTPGKGGTVIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 VAEA + T ANASVIYVPP+ A DAI+E+ +A + L++CITEGIPVLDMV+VK LE Sbjct: 56 KVAEAVKETGANASVIYVPPAFAADAIMEAADAGLELVICITEGIPVLDMVKVKRYLEGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TPD CKIGIMPG I R G VG++SRSGTLTYEAV Q + G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPDQCKIGIMPGYIHRPGHVGVVSRSGTLTYEAVHQLTTRGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+LF D TE+++M+GEIGG+AEEEAA+++K KKP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKLFNEDPETEAVIMIGEIGGTAEEEAAEWIKANM----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAP G+ MGHAGA+ISGGKG A +KI +KE G+ +AP+PA++G +LVE+L Sbjct: 232 GFIAGATAPKGKRMGHAGAIISGGKGTAAEKIAKLKECGVRVAPTPAQMGETLVEVLKE 290 >gi|296447746|ref|ZP_06889661.1| succinyl-CoA synthetase, alpha subunit [Methylosinus trichosporium OB3b] gi|296254723|gb|EFH01835.1| succinyl-CoA synthetase, alpha subunit [Methylosinus trichosporium OB3b] Length = 294 Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 211/297 (71%), Positives = 261/297 (87%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TGK GTFH+EQAILY T++VGG+ P KG + ++++PVF Sbjct: 1 MSVLIDKNTKVICQGFTGKNGTFHSEQAILY-GTRMVGGVSPGKGGS----KHLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E+T A+ASVIYVPP GA DAI E+I+AEIPLIV ITEG+PV DM+RV+ L S Sbjct: 56 TVAEAREKTGADASVIYVPPPGAADAICEAIDAEIPLIVAITEGVPVHDMIRVRRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMPG+IF GSVG++SRSGTLTYEAVFQT++EGLGQ++A Sbjct: 116 KSRLIGPNCPGVVTAGECKIGIMPGNIFSNGSVGVVSRSGTLTYEAVFQTTREGLGQTSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGT+FI+VLELFLAD+AT+SI+M+GEIGGSAEE+AA+FL+DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTDFIEVLELFLADDATKSIIMIGEIGGSAEEDAAEFLRDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGDAESKIAAMESAGIRVSPSPARLGKTLVEML 292 >gi|254440234|ref|ZP_05053728.1| succinyl-CoA synthetase, alpha subunit subfamily [Octadecabacter antarcticus 307] gi|198255680|gb|EDY79994.1| succinyl-CoA synthetase, alpha subunit subfamily [Octadecabacter antarcticus 307] Length = 293 Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 191/298 (64%), Positives = 243/298 (81%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+D+NTKV+ QGLTG GTFH+EQAI Y T++VGG+ P KG +++P+F Sbjct: 1 MAILIDENTKVICQGLTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTH----LDLPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA T ANASVIYVPP A D+I+E+I+AE+ LI+CITEGIPVLDM++VK LE S Sbjct: 56 SVHEAMHVTGANASVIYVPPPFAADSILEAIDAEMELIICITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TP++CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQSTA Sbjct: 116 KSRLIGPNCPGVITPNACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDSGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE ID+L +FL D+ T S++M+GEIGGSAEEEAA+FL + K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDILNMFLDDDETHSMIMIGEIGGSAEEEAAEFLTAQKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMK+AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEAMKKAGIIVADSPATLGEAVLKAIG 293 >gi|212639578|ref|YP_002316098.1| succinyl-CoA synthetase subunit alpha [Anoxybacillus flavithermus WK1] gi|212561058|gb|ACJ34113.1| Succinyl-CoA synthetase, alpha subunit [Anoxybacillus flavithermus WK1] Length = 300 Score = 331 bits (849), Expect = 6e-89, Method: Composition-based stats. Identities = 186/299 (62%), Positives = 232/299 (77%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ V+K+TKV+VQG+TG G FHT+Q I Y T +VGG+ P KG T G VPVF Sbjct: 1 MSVFVNKDTKVIVQGITGSQGLFHTKQMIEY-GTNIVGGVTPGKGGTEVEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA E+T ANASVIYVPP+ A DAI+E+++AEI L+VCITEGIPVLDMV+VK +E Sbjct: 56 TVSEAVEKTGANASVIYVPPAFAADAIMEAVDAEIDLVVCITEGIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +Q G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDEDTYAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI M GI +A +PA IG +L+ +L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTMTACGIKVAETPAVIGETLISVLKE 290 >gi|326489921|dbj|BAJ94034.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326516512|dbj|BAJ92411.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326517002|dbj|BAJ96493.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 329 Score = 331 bits (849), Expect = 7e-89, Method: Composition-based stats. Identities = 182/297 (61%), Positives = 227/297 (76%), Gaps = 9/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDK+T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF +V Sbjct: 35 VFVDKSTRVICQGITGKNGTFHTEQAIEY-GTNMVGGVTPKKGGTEHLG----LPVFNSV 89 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 AEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMV+VKA L +S Sbjct: 90 AEAKAETKANASVIYVPPPFAAAAIMEALEAELDLVVCITEGIPQHDMVKVKAALNRQSK 149 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 150 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCV 209 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G+GGDP GT F+D LE F+ D TE IV++GEIGG+AEE+AA F+++ KP+V Sbjct: 210 GMGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGTAEEDAAAFIRESKTE---KPVVA 266 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA++SGGKG A+DKI A++EAG+ + SPA+IG ++ E+ Sbjct: 267 FIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIFK 323 >gi|297183588|gb|ADI19715.1| hypothetical protein [uncultured bacterium EB000_36F02] Length = 291 Score = 331 bits (849), Expect = 7e-89, Method: Composition-based stats. Identities = 195/299 (65%), Positives = 240/299 (80%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KNTK++ QG TG GTFH+EQAI Y T + GG+ PKKG +++ PVF Sbjct: 1 MSVLVNKNTKLICQGFTGSHGTFHSEQAIKY-GTNLAGGVTPKKGGQ----KHLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK+ T ANAS+IYVP A AIIE+I++EI LIVCITEGIPVLDM++VK +L +S Sbjct: 56 TVEEAKKETGANASMIYVPAKFAASAIIEAIDSEIELIVCITEGIPVLDMLKVKKKLSES 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP+ CK+GIMPG I +KGSVGI+SRSGTLTYEAV QT++ GLGQST Sbjct: 116 KSRLIGPNCPGIITPEECKVGIMPGKIHKKGSVGIVSRSGTLTYEAVAQTTETGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+LFL DE TESI+M+GEIGG+AEEEAA+F+K+ KKP+V Sbjct: 176 IGIGGDPINGTNFIDCLDLFLNDEETESILMIGEIGGTAEEEAAEFVKNHKI---KKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKGGA+DKI M+E GI IA SP+ IG++L+ L + Sbjct: 233 GFIAGITAPPGRRMGHAGAIISGGKGGAKDKIKKMEECGIIIAQSPSEIGKTLLNKLSN 291 >gi|220921133|ref|YP_002496434.1| succinyl-CoA synthetase subunit alpha [Methylobacterium nodulans ORS 2060] gi|219945739|gb|ACL56131.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium nodulans ORS 2060] Length = 294 Score = 331 bits (849), Expect = 7e-89, Method: Composition-based stats. Identities = 220/297 (74%), Positives = 255/297 (85%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TGK GTFH+EQAI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGKNGTFHSEQAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E T A+ASV+YVPP GA DAI E+I+AEIPLIVCITEGIPVLDMV+VK L+ S Sbjct: 56 TVAEAREATGADASVVYVPPPGAADAICEAIQAEIPLIVCITEGIPVLDMVKVKRALDGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+T KIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+ GLGQ+TA Sbjct: 116 KSRLVGPNCPGIVTAGESKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTSAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFID+LE FLADE TESIVM+GEIGGSAEE+AAQF+ DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDMLEKFLADEKTESIVMIGEIGGSAEEDAAQFIADEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPAR+G++LVELL Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPARLGKTLVELL 292 >gi|84500190|ref|ZP_00998456.1| Succinyl-CoA synthetase, alpha subunit [Oceanicola batsensis HTCC2597] gi|84392124|gb|EAQ04392.1| Succinyl-CoA synthetase, alpha subunit [Oceanicola batsensis HTCC2597] Length = 294 Score = 331 bits (849), Expect = 8e-89, Method: Composition-based stats. Identities = 200/298 (67%), Positives = 249/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG + +++PVF Sbjct: 1 MAVLVDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGSTH----LDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA ++T ANASVIYVPP A D+I+E+I+AEIPLIVCITEGIPVLDM++VKA L+ S Sbjct: 56 SVHEAVDQTGANASVIYVPPPFAADSILEAIDAEIPLIVCITEGIPVLDMMKVKAALKNS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQS+A Sbjct: 116 PCTLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDAGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE+FLAD+ TESI+M+GEIGGSAEEEAAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEMFLADDETESIIMIGEIGGSAEEEAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGA+DKI AMK AGI +A SPA +G ++++ + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGADDKIEAMKSAGIVVADSPAGLGEAVLKAIK 293 >gi|138894730|ref|YP_001125183.1| succinyl-CoA synthetase subunit alpha [Geobacillus thermodenitrificans NG80-2] gi|196247651|ref|ZP_03146353.1| succinyl-CoA synthetase, alpha subunit [Geobacillus sp. G11MC16] gi|134266243|gb|ABO66438.1| Succinyl-CoA synthetase (alpha subunit) [Geobacillus thermodenitrificans NG80-2] gi|196212435|gb|EDY07192.1| succinyl-CoA synthetase, alpha subunit [Geobacillus sp. G11MC16] Length = 300 Score = 331 bits (849), Expect = 8e-89, Method: Composition-based stats. Identities = 184/299 (61%), Positives = 232/299 (77%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ V+K+TKV+VQG+TG G FHT+Q I Y T +VGG+ P KG T G VPVF Sbjct: 1 MSVFVNKDTKVIVQGITGSQGLFHTKQMIEY-GTNIVGGVTPGKGGTEVEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA E+T ANASVIYVPP+ A DAI+E+++AE+ L+VCITEGIPVLDMV+VK +E Sbjct: 56 TVSEAVEKTGANASVIYVPPAFAADAIMEAVDAELDLVVCITEGIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +Q G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETYAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI M E GI +A +PA IG +L+ +L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKKMNECGIKVAETPAVIGETLISVLKE 290 >gi|260576569|ref|ZP_05844557.1| succinyl-CoA synthetase, alpha subunit [Rhodobacter sp. SW2] gi|259021173|gb|EEW24481.1| succinyl-CoA synthetase, alpha subunit [Rhodobacter sp. SW2] Length = 294 Score = 331 bits (848), Expect = 8e-89, Method: Composition-based stats. Identities = 195/299 (65%), Positives = 242/299 (80%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+K T+V+ QG TG GTFH+EQAI Y T++VGG+ P KG + +++PVF Sbjct: 1 MAVLVNKTTRVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGSTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+ T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++VK L+ + Sbjct: 56 SVHEARAVTGANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVKRALQGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD CKIGIMPG I R+GSVG++SRSGTLTYEAV QTS GLGQSTA Sbjct: 116 KSRLIGPNCPGVITPDECKIGIMPGHIHRRGSVGVVSRSGTLTYEAVKQTSDLGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KG+E ID+LELFLAD T SI+M+GEIGG+AEE+AAQFL DE KRGR KP Sbjct: 176 VGIGGDPIKGSEHIDILELFLADPETHSIIMIGEIGGAAEEDAAQFLADEKKRGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAP GR MGHAGA++SGGKG AE KI AMK AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPAGRRMGHAGAIVSGGKGDAESKIEAMKRAGIVVADSPAHLGEAVMQAIGK 294 >gi|326513084|dbj|BAK03449.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 329 Score = 331 bits (848), Expect = 9e-89, Method: Composition-based stats. Identities = 181/297 (60%), Positives = 226/297 (76%), Gaps = 9/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDK+T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF +V Sbjct: 35 VFVDKSTRVICQGITGKNGTFHTEQAIEY-GTNMVGGVTPKKGGTEHLG----LPVFNSV 89 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 AEAK T ANASVIYVPP A I+E++EAE+ L+VCITEGIP DMV+VKA L +S Sbjct: 90 AEAKAETKANASVIYVPPPFAAATIMEALEAELDLVVCITEGIPQHDMVKVKAALNRQSK 149 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 150 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCV 209 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G+GGDP GT F+D LE F+ D TE IV++GEIGG+AEE+AA F+++ KP+V Sbjct: 210 GMGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGTAEEDAAAFIRESKTE---KPVVA 266 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA++SGGKG A+DKI A++EAG+ + SPA+IG ++ E+ Sbjct: 267 FIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIFK 323 >gi|254461601|ref|ZP_05075017.1| succinyl-CoA synthase, alpha subunit [Rhodobacterales bacterium HTCC2083] gi|206678190|gb|EDZ42677.1| succinyl-CoA synthase, alpha subunit [Rhodobacteraceae bacterium HTCC2083] Length = 293 Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 201/298 (67%), Positives = 248/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD+NTKV+ QGLTG GTFH+EQAI Y T++VGG+ P KG T +++PVF Sbjct: 1 MAVLVDENTKVICQGLTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+ T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM+RV+ LE S Sbjct: 56 SVHEARHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMRVQRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPG++TPD+CKIGIMPG I ++GS G++SRSGTLTYEAV QT+ GLGQS+A Sbjct: 116 SSRLIGPNCPGVITPDACKIGIMPGHIHKRGSCGVVSRSGTLTYEAVKQTTDLGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE+FL D T+SI+M+GEIGGSAEEEAAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEMFLGDPETQSIIMIGEIGGSAEEEAAQFLADEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AM+ AGI +A SPA +G +++E +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMRSAGIVVADSPATLGEAVIEAIG 293 >gi|254449510|ref|ZP_05062947.1| succinyl-CoA ligase, alpha subunit [Octadecabacter antarcticus 238] gi|198263916|gb|EDY88186.1| succinyl-CoA ligase, alpha subunit [Octadecabacter antarcticus 238] Length = 293 Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 192/298 (64%), Positives = 243/298 (81%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+D+NTKV+ QGLTG GTFH+EQAI Y T++VGG+ P KG +++P+F Sbjct: 1 MAILIDENTKVICQGLTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTH----LDLPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LI+CITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIICITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TP++CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQSTA Sbjct: 116 KSRLIGPNCPGVITPNACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDSGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE ID+L +FL D+ T S++M+GEIGGSAEEEAA+FL + K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDILNMFLDDDETHSMIMIGEIGGSAEEEAAEFLTAQKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMK AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEAMKSAGIIVADSPATLGEAVLKAIG 293 >gi|84515873|ref|ZP_01003234.1| Succinyl-CoA synthetase, alpha subunit [Loktanella vestfoldensis SKA53] gi|84510315|gb|EAQ06771.1| Succinyl-CoA synthetase, alpha subunit [Loktanella vestfoldensis SKA53] Length = 293 Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 198/298 (66%), Positives = 247/298 (82%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV++NT+V+ QGLTG GTFH+EQAI Y T++VGG+ P KG + +++PVF Sbjct: 1 MAILVNENTRVICQGLTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGSTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+ T ANASVIYVPP A D+I+E+I+AE+ LI+CITEGIPVLDM++VK LE S Sbjct: 56 SVHEARHVTQANASVIYVPPPFAADSILEAIDAEMELIICITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I R+GSVG++SRSGTLTYEAV QTS GLGQSTA Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHRRGSVGVVSRSGTLTYEAVKQTSDSGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KG+E ID+LE+FLAD+ T SI+M+GEIGGSAEEEAAQFL DE K+GR KP Sbjct: 176 VGIGGDPIKGSEHIDILEMFLADDETHSIIMIGEIGGSAEEEAAQFLADERKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMK AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEAMKSAGIIVADSPATLGEAVLKAIG 293 >gi|295399797|ref|ZP_06809778.1| succinyl-CoA synthetase, alpha subunit [Geobacillus thermoglucosidasius C56-YS93] gi|312111691|ref|YP_003990007.1| succinyl-CoA synthetase, subunit alpha [Geobacillus sp. Y4.1MC1] gi|294978200|gb|EFG53797.1| succinyl-CoA synthetase, alpha subunit [Geobacillus thermoglucosidasius C56-YS93] gi|311216792|gb|ADP75396.1| succinyl-CoA synthetase, alpha subunit [Geobacillus sp. Y4.1MC1] Length = 300 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 185/299 (61%), Positives = 234/299 (78%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVFINKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTEIEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA E+T ANASVIYVPP+ A DAI+E+++AE+ L+VCITEGIPVLDMV+VK +E Sbjct: 56 TVSEAVEKTGANASVIYVPPAFAADAIMEAVDAELDLVVCITEGIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +Q G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T +++M+GEIGG+AEEEAA+++K KKP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDEETYAVIMIGEIGGTAEEEAAEWVKANM----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI M E GI +A +PA IG +L+ +L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKKMNECGIKVAETPAVIGETLIAVLKE 290 >gi|298292945|ref|YP_003694884.1| succinyl-CoA synthetase, subunit alpha [Starkeya novella DSM 506] gi|296929456|gb|ADH90265.1| succinyl-CoA synthetase, alpha subunit [Starkeya novella DSM 506] Length = 298 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 221/299 (73%), Positives = 262/299 (87%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TK++ QG TGK GTFH+EQA+ Y ++VVGG P KG + G +PVF Sbjct: 1 MSVLINKDTKIITQGFTGKNGTFHSEQALAY-GSKVVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E+T A+ASV+YVPP GA DAI E+I AEIPLIVCITEGIPVLDMV+V+ L+ S Sbjct: 56 TVAEAREKTGADASVVYVPPPGAADAICEAIAAEIPLIVCITEGIPVLDMVKVRRALDGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+T CKIGIMP +IFRKG+VGI+SRSGTLTYEAVFQTSQEGLGQ+TA Sbjct: 116 KSRLVGPNCPGIVTAGECKIGIMPANIFRKGNVGIVSRSGTLTYEAVFQTSQEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLELFLAD+ATESIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLELFLADDATESIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPAR+G++L+E+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIVVSPSPARLGKTLIEVLNK 294 >gi|294012419|ref|YP_003545879.1| succinyl-CoA synthetase alpha chain [Sphingobium japonicum UT26S] gi|292675749|dbj|BAI97267.1| succinyl-CoA synthetase alpha chain [Sphingobium japonicum UT26S] Length = 294 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 213/298 (71%), Positives = 250/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+ QG+TG GTFHTE A+ Y TQ+VGG+ P KG T G +P+F Sbjct: 1 MSILVNKNTKVITQGMTGATGTFHTETALAY-GTQMVGGVTPGKGGTTHIG----LPMFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK +T A+ASVIYVPP A D+I+E+I+AEIPLIVCITEGIPVLDMV+VK L S Sbjct: 56 TVAEAKAKTGADASVIYVPPPFAADSILEAIDAEIPLIVCITEGIPVLDMVKVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP CKIGIMPG+IF KGSVG++SRSGTLTYEAVFQTS GLGQ+TA Sbjct: 116 KSRLIGPNCPGLLTPGECKIGIMPGNIFSKGSVGVVSRSGTLTYEAVFQTSNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELFLAD+ATESI+M+GEIGG AEE+AAQFL DEAK+GRKKP+ Sbjct: 176 VGIGGDPVNGTNFIDVLELFLADDATESIIMIGEIGGDAEEQAAQFLIDEAKKGRKKPMA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA++SGGKG AE KI AM+ AGI +A SP+ +G +L+E+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGDAESKIAAMEAAGIKVAASPSELGTTLLEVLK 293 >gi|168026667|ref|XP_001765853.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683030|gb|EDQ69444.1| predicted protein [Physcomitrella patens subsp. patens] Length = 324 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 185/299 (61%), Positives = 232/299 (77%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF T Sbjct: 30 AVFVDKTTRVICQGITGKNGTFHTEQAIDY-GTNMVGGVTPKKGGTEHLG----LPVFNT 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 VAEAK+ T ANASVIYVP S A +AI+E+++AE+ L+VCITEGIP DMV+VK A L++S Sbjct: 85 VAEAKKETKANASVIYVPASLAANAILEALDAELDLVVCITEGIPQHDMVKVKSALLQQS 144 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 145 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTC 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE IV++GEIGGSAEE+AA F+++ G +KP+V Sbjct: 205 VGIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGSAEEDAAAFIRE---SGTQKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+ISGGKG A DKINA++ AG+ + SPA+IG +++++ Sbjct: 262 SFIAGLTAPPGRRMGHAGAIISGGKGTATDKINALRAAGVTVCESPAQIGATMLKVFEE 320 >gi|288553076|ref|YP_003425011.1| succinyl-CoA synthetase subunit alpha [Bacillus pseudofirmus OF4] gi|288544236|gb|ADC48119.1| succinyl-CoA synthetase subunit alpha [Bacillus pseudofirmus OF4] Length = 304 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 179/299 (59%), Positives = 231/299 (77%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+VQG+TG G FHT+QAI Y TQ+VGG+ P KG T G VPVF Sbjct: 1 MSILINKDTKVIVQGITGATGLFHTQQAIEY-GTQIVGGVTPGKGGTEVEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASVIYVPP+ A DAI+E+++AE+ L +CITEGIPV+DMV V+ +E Sbjct: 56 TVEDAVKATGANASVIYVPPAFAADAIMEAVDAELDLAICITEGIPVMDMVSVRRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSTNGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELF D T +++M+GEIGG+AEEEAA+++K KKP+V Sbjct: 176 VGIGGDPVNGTNFIDVLELFNEDPETYAVIMIGEIGGTAEEEAAEWIKANM----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI ++ G+ +A +P+ +G +L++ L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKTLESCGVKVAETPSVMGETLIKALKE 290 >gi|56419744|ref|YP_147062.1| succinyl-CoA synthetase subunit alpha [Geobacillus kaustophilus HTA426] gi|261419409|ref|YP_003253091.1| succinyl-CoA synthetase subunit alpha [Geobacillus sp. Y412MC61] gi|297530616|ref|YP_003671891.1| succinyl-CoA synthetase, subunit alpha [Geobacillus sp. C56-T3] gi|319766224|ref|YP_004131725.1| succinyl-CoA synthetase, subunit alpha [Geobacillus sp. Y412MC52] gi|56379586|dbj|BAD75494.1| succinyl-CoA synthetase alpha subunit [Geobacillus kaustophilus HTA426] gi|261375866|gb|ACX78609.1| succinyl-CoA synthetase, alpha subunit [Geobacillus sp. Y412MC61] gi|297253868|gb|ADI27314.1| succinyl-CoA synthetase, alpha subunit [Geobacillus sp. C56-T3] gi|317111090|gb|ADU93582.1| succinyl-CoA synthetase, alpha subunit [Geobacillus sp. Y412MC52] Length = 300 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 185/299 (61%), Positives = 231/299 (77%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ V+K+TKV+VQG+TG G FHT+Q I Y T +VGG+ P KG T G VPVF Sbjct: 1 MSVFVNKDTKVIVQGITGSQGLFHTKQMIEY-GTNIVGGVTPGKGGTEVEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA ERT ANASVIYVPP+ A DAI+E+++A + L+VCITEGIPVLDMV+VK +E Sbjct: 56 TVSEAVERTGANASVIYVPPAFAADAIMEAVDAGLDLVVCITEGIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +Q G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDEETYAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI M E GI +A +PA IG +L+ +L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKKMTECGIKVAETPAVIGETLISVLKE 290 >gi|103487710|ref|YP_617271.1| succinyl-CoA synthetase, alpha subunit [Sphingopyxis alaskensis RB2256] gi|98977787|gb|ABF53938.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Sphingopyxis alaskensis RB2256] Length = 296 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 209/299 (69%), Positives = 248/299 (82%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG+TG GTFHTEQA+ Y T++VGG+ P KG T G +P+F Sbjct: 1 MSILIDKNTKVITQGMTGATGTFHTEQALAY-GTKMVGGVTPGKGGTTHIG----LPMFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A ASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDMV+VK L S Sbjct: 56 TVEEAKHATGATASVIYVPPPFAADSILEAIDAEVELIVCITEGIPVLDMVKVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNVGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELFLAD+AT+SI+M+GEIGG AEE+AAQFL DEAKRGRKKP+ Sbjct: 176 VGIGGDPVNGTNFIDVLELFLADDATKSIIMIGEIGGDAEEQAAQFLIDEAKRGRKKPMA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA++SGGKG AE KI AM+ AGI ++ SP+ +G +L E+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGDAESKIAAMEAAGIKVSASPSELGTTLAEVLKE 294 >gi|239947281|ref|ZP_04699034.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Rickettsia endosymbiont of Ixodes scapularis] gi|239921557|gb|EER21581.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Rickettsia endosymbiont of Ixodes scapularis] Length = 292 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 181/299 (60%), Positives = 234/299 (78%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K TKV+ QG TG GTFH+EQAI Y T +VGG+ P KG +++PV+ Sbjct: 1 MAILINKKTKVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGHTH----LDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+AEI ++VCITEGIPVLDMV+VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMVKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV T F+D +E+FL D+ T++I+M+GEIGG+AEE+AA+F+K KKPIV Sbjct: 176 VGIGGDPVNDTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDAAEFIKQSKI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPG+ MGHAGA+I+GGKG AEDK+ A++ AG+ I SPA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIAGGKGSAEDKLEALQSAGVTITRSPADIGKTMLDLLNK 291 >gi|92399543|gb|ABE76513.1| mitochondrial putative GDP-forming succinate-CoA ligase alpha subunit [Toxoplasma gondii] Length = 333 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 180/300 (60%), Positives = 227/300 (75%), Gaps = 6/300 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW--TGGNVNVPVFT 60 + VDKNTKV+ QGLTGK G+FHTEQ + Y TQ VGG++P K + W + G ++PVF Sbjct: 33 VFVDKNTKVICQGLTGKQGSFHTEQCLAY-GTQFVGGVNPSKKGSTWQSSDGKFSLPVFG 91 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEK 119 TV EAKE T +AS+I+VPP A AI++ I EIPL VCITEGIP DMVRVK A L + Sbjct: 92 TVKEAKEATGCDASMIFVPPPFAAQAIMDCIAEEIPLAVCITEGIPQQDMVRVKQALLSQ 151 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +RLIGPNCPGI+ P CKIGIMPG I KG +G++SRSGTLTYEAV QT+Q GLGQST Sbjct: 152 NKTRLIGPNCPGIIKPGECKIGIMPGYIHAKGKIGVVSRSGTLTYEAVNQTTQTGLGQST 211 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT FID LE F+ D T+ IV++GEIGGSAEEEAA +LK+ K +KP+ Sbjct: 212 CVGIGGDPFNGTNFIDCLERFVNDPETKGIVLIGEIGGSAEEEAAAWLKEHNKE--QKPV 269 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V F+AG TAPPGR MGHAGA++SGGKG AE KI A+++AG+ + +PA +G+ ++E++ + Sbjct: 270 VSFIAGLTAPPGRRMGHAGAIVSGGKGTAEGKIAALEDAGVHVVRNPAAMGQKMLEVMQA 329 >gi|332306152|ref|YP_004434003.1| succinyl-CoA synthetase, alpha subunit [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173481|gb|AEE22735.1| succinyl-CoA synthetase, alpha subunit [Glaciecola agarilytica 4H-3-7+YE-5] Length = 290 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 176/298 (59%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGGQGTFHSEQAIEY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+ +A I LIVCITEGIP LDM+ VK + + Sbjct: 56 TVREAVEETGATATVIYVPAPFCKDSIVEAADAGIELIVCITEGIPTLDMLYVKEYVNRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILQMFQDDPKTEAIVMIGEIGGTAEEEAAAFIKANI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A+DK A+++AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADDKFKALEDAGVKTVRSLAEIGQGLREITG 289 >gi|126668315|ref|ZP_01739274.1| succinyl-CoA synthetase subunit alpha [Marinobacter sp. ELB17] gi|126627232|gb|EAZ97870.1| succinyl-CoA synthetase subunit alpha [Marinobacter sp. ELB17] Length = 290 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH++QAI Y T +VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGSQGTFHSQQAIEY-GTNMVGGVSPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A+A+VIYVP DAIIE+ +A I LIVCITEGIP +DM+ K +++ Sbjct: 56 TVREAVEKTGAHATVIYVPAPFCKDAIIEAADAGIELIVCITEGIPTIDMLYAKEYVDRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDFGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+L D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLLQEDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+ +AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALNDAGVKTVRSLADIGKALKEVTG 289 >gi|119476710|ref|ZP_01617020.1| succinyl-CoA synthetase alpha subunit [marine gamma proteobacterium HTCC2143] gi|119449966|gb|EAW31202.1| succinyl-CoA synthetase alpha subunit [marine gamma proteobacterium HTCC2143] Length = 291 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 176/298 (59%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA E T A+ASVIYVP D+I+E+ + I LIVCITEGIP LDM+ K R ++ Sbjct: 56 TVSEAVEATGADASVIYVPAPFCKDSILEAANSGIKLIVCITEGIPTLDMLDCKVRCDQL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGRVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D ATE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFQNDPATEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG +L EL G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLAEIGDALSELTG 289 >gi|307293436|ref|ZP_07573282.1| succinyl-CoA synthetase, alpha subunit [Sphingobium chlorophenolicum L-1] gi|306881502|gb|EFN12718.1| succinyl-CoA synthetase, alpha subunit [Sphingobium chlorophenolicum L-1] Length = 294 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 212/298 (71%), Positives = 250/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+ QG+TG GTFHTE A+ Y TQ+VGG+ P KG T G +P+F Sbjct: 1 MSILVNKNTKVITQGMTGATGTFHTETALAY-GTQMVGGVTPGKGGTSHIG----LPMFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK +T A+ASVIYVPP A D+I+E+I+AEIPLIVCITEGIPVLDMV+VK L S Sbjct: 56 TVAEAKSKTGADASVIYVPPPFAADSILEAIDAEIPLIVCITEGIPVLDMVKVKRSLSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP CKIGIMPG+IF KGSVG++SRSGTLTYEAVFQT+ GLGQ+TA Sbjct: 116 KSRLIGPNCPGLLTPGECKIGIMPGNIFSKGSVGVVSRSGTLTYEAVFQTTNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELFLAD+ATESI+M+GEIGG AEE+AAQFL DEAK+GRKKP+ Sbjct: 176 VGIGGDPVNGTNFIDVLELFLADDATESIIMIGEIGGDAEEQAAQFLIDEAKKGRKKPMA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA++SGGKG AE KI AM+ AGI +A SP+ +G +L+E+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGDAESKIAAMEAAGIKVAASPSELGTTLLEVLK 293 >gi|242046092|ref|XP_002460917.1| hypothetical protein SORBIDRAFT_02g037420 [Sorghum bicolor] gi|241924294|gb|EER97438.1| hypothetical protein SORBIDRAFT_02g037420 [Sorghum bicolor] Length = 332 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 181/298 (60%), Positives = 229/298 (76%), Gaps = 9/298 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK+T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF + Sbjct: 37 AVFVDKSTRVICQGITGKNGTFHTEQAIEY-GTNMVGGVTPKKGGTEHLG----LPVFNS 91 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK T ANASVIYVPP A AI+E+++AE+ L+VCITEGIP DMV+VKA L +S Sbjct: 92 VAEAKAETKANASVIYVPPPFAAAAIMEAMDAELDLVVCITEGIPQHDMVKVKAALNRQS 151 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 152 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTC 211 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE IV++GEIGG+AEE+AA F+++ + KP+V Sbjct: 212 VGIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGTAEEDAATFIQESKTQ---KPVV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA+++GGKG A+DKI A++EAG+ + SPA+IG ++ E+ Sbjct: 269 AFIAGLTAPPGRRMGHAGAIVAGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIFK 326 >gi|168020790|ref|XP_001762925.1| predicted protein [Physcomitrella patens subsp. patens] gi|162685737|gb|EDQ72130.1| predicted protein [Physcomitrella patens subsp. patens] Length = 324 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 186/299 (62%), Positives = 231/299 (77%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF T Sbjct: 30 AVFVDKTTRVICQGITGKNGTFHTEQAIDY-GTNMVGGVTPKKGGTEHLG----LPVFNT 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 VAEAK+ T ANASVIYVP S A +AI+E+++AE+ L+VCITEGIP DMV+VK A L++S Sbjct: 85 VAEAKKETRANASVIYVPASLAANAILEALDAELDLVVCITEGIPQHDMVKVKSALLQQS 144 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 145 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTC 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE IV++GEIGGSAEE+AA F+K+ G +KP+V Sbjct: 205 VGIGGDPFNGTNFVDCLEKFVNDPQTEGIVLIGEIGGSAEEDAAAFIKE---SGTQKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+ISGGKG A DKINA++ AG+ + SPA+IG +++ + Sbjct: 262 SFIAGLTAPPGRRMGHAGAIISGGKGTATDKINALRAAGVTVCESPAQIGSTMLRVFQE 320 >gi|148252002|ref|YP_001236587.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Bradyrhizobium sp. BTAi1] gi|146404175|gb|ABQ32681.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Bradyrhizobium sp. BTAi1] Length = 294 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 216/299 (72%), Positives = 251/299 (83%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TGK GTFH+E AI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+E T A+ASVIYVPP GA DAI E+I+AE+PLIVCITEGIPVLDMVRVK L+ S Sbjct: 56 TVKEAREATGADASVIYVPPPGAADAICEAIDAEVPLIVCITEGIPVLDMVRVKRSLQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+ EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVMTAGECKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTSEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFID+LE+FLAD TESI+M+GEIGGSAEE+AAQF+KDEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDMLEMFLADPKTESIIMIGEIGGSAEEDAAQFIKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++LVE L S Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAGSKTAAMEAAGITVSPSPARLGKTLVEKLKS 294 >gi|319649578|ref|ZP_08003734.1| succinyl-CoA ligase subunit alpha [Bacillus sp. 2_A_57_CT2] gi|317398740|gb|EFV79422.1| succinyl-CoA ligase subunit alpha [Bacillus sp. 2_A_57_CT2] Length = 300 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 176/299 (58%), Positives = 226/299 (75%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+TKV+VQG+TG FHT+Q + Y TQ+VGG+ P KG T G VPVF Sbjct: 1 MSVFINKDTKVIVQGITGSTALFHTKQMLEY-GTQIVGGVTPGKGGTEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T ANASVIYVP A DAI+E+++AE+ L +CITE IPVLDMV+VK +E Sbjct: 56 TVEEAVKATGANASVIYVPAPFAADAILEAVDAELDLAICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I KG VG++SRSGTLTYEAV Q SQ G+GQSTA Sbjct: 116 KTRLVGPNCPGVITPDECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLSQAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPETYAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI M E GI +A +P+ +G +L+++L Sbjct: 232 GFIGGRTAPPGKRMGHAGAIISGGKGTADEKIRVMNECGIQVADTPSVMGETLIKVLKE 290 >gi|56460606|ref|YP_155887.1| succinyl-CoA synthetase, alpha subunit [Idiomarina loihiensis L2TR] gi|56179616|gb|AAV82338.1| Succinyl-CoA synthetase, alpha subunit [Idiomarina loihiensis L2TR] Length = 290 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 178/298 (59%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+IIE+ +A I LIVCITEGIP LDM+ VK L Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSIIEAADAGIELIVCITEGIPTLDMLYVKEYLTHK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ G GQS+ Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDAGFGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LELF D TE+IVM+GEIGG+AEEEAA+++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILELFEKDPETEAIVMIGEIGGTAEEEAAEYIKNNVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+I+GGKG A++K A++ AG+ S A IG+++ E G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGKAVAEKTG 289 >gi|325294373|ref|YP_004280887.1| succinyl-CoA synthetase, alpha subunit [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064821|gb|ADY72828.1| succinyl-CoA synthetase, alpha subunit [Desulfurobacterium thermolithotrophum DSM 11699] Length = 300 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 166/301 (55%), Positives = 225/301 (74%), Gaps = 7/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV--NVPV 58 MS+L++K+TKV+VQGLTGK G+FH +Q + Y TQVV G+ P KG W VPV Sbjct: 1 MSVLINKDTKVVVQGLTGKEGSFHAKQCLDY-GTQVVAGVTPGKGGMIWEDDEKRHKVPV 59 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV EA + T ANAS+I+VPP+ A DAI+E+ +A I +I+CITEGIPV DMV+VK LE Sbjct: 60 FNTVEEAVKETGANASLIFVPPAFAADAIMEAADAGIKIIICITEGIPVNDMVKVKRALE 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + R +GPNCPG++TP+ CK+GIMPG IF+KG VGI+SRSGTLTYEA +Q +Q G+GQS Sbjct: 120 GTGVRYVGPNCPGVITPEECKMGIMPGHIFKKGKVGIVSRSGTLTYEAAYQLTQRGIGQS 179 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDPV GT + +E+F D T++IV++GEIGG+ EEEAA+++K+ + KP Sbjct: 180 TVIGIGGDPVPGTTHKEAIEMFNNDPETDAIVLIGEIGGTMEEEAAEYIKENVE----KP 235 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++ ++AG TAPPGR MGHAGA+ISGGKG A+ K++A++ AG + +PA IG ++ + L Sbjct: 236 VIAYIAGVTAPPGRRMGHAGAIISGGKGDAKSKMDALRAAGAYVCETPAVIGETVEKALK 295 Query: 299 S 299 Sbjct: 296 E 296 >gi|87119163|ref|ZP_01075061.1| succinyl-CoA synthetase alpha subunit [Marinomonas sp. MED121] gi|86165554|gb|EAQ66821.1| succinyl-CoA synthetase alpha subunit [Marinomonas sp. MED121] Length = 290 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 213/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+ + I LIVCITEGIP LDM+ K ++ Sbjct: 56 TVREAVEETGAEASVIYVPAPFCKDSILEAANSGIKLIVCITEGIPTLDMLDCKVACDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLELF D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLELFQNDPKTEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG +L EL G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLADIGDALKELTG 289 >gi|237838313|ref|XP_002368454.1| succinyl-CoA ligase alpha subunit, putative [Toxoplasma gondii ME49] gi|211966118|gb|EEB01314.1| succinyl-CoA ligase alpha subunit, putative [Toxoplasma gondii ME49] gi|221484277|gb|EEE22573.1| succinyl-CoA ligase alpha subunit, putative [Toxoplasma gondii GT1] gi|221505743|gb|EEE31388.1| succinyl-CoA ligase alpha subunit, putative [Toxoplasma gondii VEG] Length = 333 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 180/300 (60%), Positives = 227/300 (75%), Gaps = 6/300 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW--TGGNVNVPVFT 60 + VDKNTKV+ QGLTGK G+FHTEQ + Y TQ VGG++P K + W + G ++PVF Sbjct: 33 VFVDKNTKVICQGLTGKQGSFHTEQCLAY-GTQFVGGVNPSKKGSTWQSSDGKFSLPVFG 91 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEK 119 TV EAKE T +AS+I+VPP A AI++ I EIPL VCITEGIP DMVRVK A L + Sbjct: 92 TVKEAKEATGCDASMIFVPPPFAAQAIMDCIAEEIPLAVCITEGIPQQDMVRVKQALLSQ 151 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +RLIGPNCPGI+ P CKIGIMPG I KG +G++SRSGTLTYEAV QT+Q GLGQST Sbjct: 152 NKTRLIGPNCPGIIKPGECKIGIMPGYIHAKGKIGVVSRSGTLTYEAVNQTTQTGLGQST 211 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT FID LE F+ D T+ IV++GEIGGSAEEEAA +LK+ K +KP+ Sbjct: 212 CVGIGGDPFNGTNFIDCLERFVNDPETKGIVLIGEIGGSAEEEAAAWLKEHNKE--QKPV 269 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V F+AG TAPPGR MGHAGA++SGGKG AE KI A+++AG+ + +PA +G+ ++E++ + Sbjct: 270 VSFIAGLTAPPGRRMGHAGAIVSGGKGTAEGKIAALEDAGVHVVRNPAAMGQKMLEVMQA 329 >gi|109898122|ref|YP_661377.1| succinyl-CoA synthetase, alpha subunit [Pseudoalteromonas atlantica T6c] gi|109700403|gb|ABG40323.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Pseudoalteromonas atlantica T6c] Length = 290 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 175/298 (58%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGGQGTFHSEQAIEY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A A+VIYVP D+I+E+ +A I LIVCITEGIP LDM+ VK + + Sbjct: 56 TVREAVQETGATATVIYVPAPFCKDSIVEAADAGIELIVCITEGIPTLDMLYVKEYVNRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILQMFQDDPKTEAIVMIGEIGGTAEEEAAAFIKANI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A+DK A+++AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADDKFKALEDAGVKTVRSLADIGQGLREITG 289 >gi|222087459|ref|YP_002545996.1| succinyl-CoA synthetase alpha subunit protein [Agrobacterium radiobacter K84] gi|221724907|gb|ACM28063.1| succinyl-CoA synthetase alpha subunit protein [Agrobacterium radiobacter K84] Length = 300 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 232/299 (77%), Positives = 271/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSIL++K+TKVLVQGLTGK GTFHTEQA+ Y T++VGGIHP KG WTG +P+F Sbjct: 1 MSILINKDTKVLVQGLTGKTGTFHTEQALAYHGTKMVGGIHPSKGGETWTGKEGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE K+ T ANASVIYVPP+GA AI+E+I+AEIPLIVCITEGIPV DMV+VKARL+K Sbjct: 61 KSVAEGKDATGANASVIYVPPAGAAAAILEAIDAEIPLIVCITEGIPVADMVKVKARLDK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPG+LTP+ CKIGIMPGSIF+KGSVG+LSRSGTLTYEAVFQT+ EGLGQ+T Sbjct: 121 SKSRLIGPNCPGVLTPNECKIGIMPGSIFKKGSVGVLSRSGTLTYEAVFQTTNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFID+LE+FLAD+ T+SI+M+GEIGGSAEEEAAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDILEMFLADDETKSIIMIGEIGGSAEEEAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMEAAGIRVSPSPARLGKTLVEVLK 299 >gi|76156042|gb|AAX27280.2| SJCHGC04909 protein [Schistosoma japonicum] Length = 320 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 180/300 (60%), Positives = 233/300 (77%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +IL+D+NTK++ QG TGK GTFH++Q + Y T++VGG+ P KG + G +PVF + Sbjct: 23 NILLDENTKLICQGFTGKQGTFHSQQTLAY-GTKLVGGVSPGKGGSVHLG----LPVFNS 77 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAK+ T A A+VIYVPP A AI E+I+AEIPLIVCITEGIP DM+RV+ RL E+S Sbjct: 78 VKEAKDATGATATVIYVPPPHAATAIYEAIDAEIPLIVCITEGIPQHDMIRVRKRLTEQS 137 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ PD CKIGIMP I + G+VGI+SRSGTLTYEAVFQT+Q GLGQS Sbjct: 138 VSRLIGPNCPGIIKPDVCKIGIMPAHIHKPGTVGIVSRSGTLTYEAVFQTTQVGLGQSLC 197 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID L++FL D T+SI+++GEIGG +EE+AA+FLK + KP+V Sbjct: 198 VGIGGDPFNGTDFIDCLQVFLNDPNTKSIILLGEIGGESEEKAAEFLKQHNVGPKHKPVV 257 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPGR MGHAGA+IS GKGGA++K+ A++ AG+ + PSPA++G +L++ + L Sbjct: 258 SFIAGVTAPPGRRMGHAGAIISLGKGGAKEKMAALESAGVVVTPSPAKLGTTLLKAIADL 317 >gi|226486592|emb|CAX74373.1| succinate-CoA ligase [Schistosoma japonicum] gi|226486594|emb|CAX74374.1| succinate-CoA ligase [Schistosoma japonicum] Length = 324 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 180/300 (60%), Positives = 233/300 (77%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +IL+D+NTK++ QG TGK GTFH++Q + Y T++VGG+ P KG + G +PVF + Sbjct: 27 NILLDENTKLICQGFTGKQGTFHSQQTLAY-GTKLVGGVSPGKGGSVHLG----LPVFNS 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAK+ T A A+VIYVPP A AI E+I+AEIPLIVCITEGIP DM+RV+ RL E+S Sbjct: 82 VKEAKDATGATATVIYVPPPHAATAIYEAIDAEIPLIVCITEGIPQHDMIRVRKRLTEQS 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ PD CKIGIMP I + G+VGI+SRSGTLTYEAVFQT+Q GLGQS Sbjct: 142 VSRLIGPNCPGIIKPDVCKIGIMPAHIHKPGTVGIVSRSGTLTYEAVFQTTQVGLGQSLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID L++FL D T+SI+++GEIGG +EE+AA+FLK + KP+V Sbjct: 202 VGIGGDPFNGTDFIDCLQVFLNDPNTKSIILLGEIGGESEEKAAEFLKQHNVGPKHKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPGR MGHAGA+IS GKGGA++K+ A++ AG+ + PSPA++G +L++ + L Sbjct: 262 SFIAGVTAPPGRRMGHAGAIISLGKGGAKEKMAALESAGVVVTPSPAKLGTTLLKAIADL 321 >gi|149191115|ref|ZP_01869374.1| succinyl-CoA synthetase subunit alpha [Vibrio shilonii AK1] gi|148835043|gb|EDL52021.1| succinyl-CoA synthetase subunit alpha [Vibrio shilonii AK1] Length = 290 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 181/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIEY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP DAI+E+I+A I LIV ITEGIP LD++ VK RL+++ Sbjct: 56 TVREAVEETGATASVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTLDLLDVKVRLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPETEAIVMIGEIGGTAEEEAAAFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREITG 289 >gi|317491189|ref|ZP_07949625.1| succinate-CoA ligase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920736|gb|EFV42059.1| succinate-CoA ligase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 289 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 173/297 (58%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGSQGTFHSEQALAY-GTKLVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VKA+LE+S Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIICITEGIPTLDMLVVKAKLEQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQS+ Sbjct: 116 DARMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDIGFGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE IVM+GEIGG+AEE+AA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEVIVMIGEIGGNAEEDAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLAEIGNAVKTVL 288 >gi|332535009|ref|ZP_08410825.1| succinyl-CoA ligase [ADP-forming] alpha chain [Pseudoalteromonas haloplanktis ANT/505] gi|332035576|gb|EGI72069.1| succinyl-CoA ligase [ADP-forming] alpha chain [Pseudoalteromonas haloplanktis ANT/505] Length = 290 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQALEY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A ASVIYVP DAI+E+I+A I LIVCITEGIP LDMV VK +L+++ Sbjct: 56 TVRDAVQETGATASVIYVPAPFCKDAILEAIDAGIELIVCITEGIPTLDMVDVKVKLDQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP KIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GTRMIGPNCPGVITPGETKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFEKDPQTEAIVMIGEIGGTAEEEAAEYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG++L E G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLAEIGKALKEKTG 289 >gi|89095245|ref|ZP_01168167.1| succinyl-CoA synthetase alpha chain [Oceanospirillum sp. MED92] gi|89080499|gb|EAR59749.1| succinyl-CoA synthetase alpha chain [Oceanospirillum sp. MED92] Length = 290 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A ASVIYVP D+I+E+ A I LIVCITE IPV+DM+ K R ++ Sbjct: 56 TVAEAVAETGAEASVIYVPAPFCKDSILEAANAGIKLIVCITEHIPVMDMLECKVRCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA+F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFQNDPQTEAIVMIGEIGGSAEEEAAEFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A+IG +L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLAQIGDALKEVTG 289 >gi|59711433|ref|YP_204209.1| succinyl-CoA synthetase subunit alpha [Vibrio fischeri ES114] gi|197336007|ref|YP_002155588.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio fischeri MJ11] gi|59479534|gb|AAW85321.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Vibrio fischeri ES114] gi|197317497|gb|ACH66944.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio fischeri MJ11] Length = 290 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIDY-GTQMVGGVSPGKGGQVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+A I LIV ITEGIP LD++ VK RL+ Sbjct: 56 TVRDAVEATGATASVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTLDLLDVKVRLDAE 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++EAG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEEAGVKTVKSLADIGKALREVTG 289 >gi|88798686|ref|ZP_01114269.1| succinyl-CoA synthetase alpha subunit [Reinekea sp. MED297] gi|88778449|gb|EAR09641.1| succinyl-CoA synthetase alpha subunit [Reinekea sp. MED297] Length = 290 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGSQGTFHSEQAIEY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI E+ +A I LIVCITEGIP LDM+ K +++ Sbjct: 56 TVREAVETTGATATVIYVPAPFCKDAICEAADAGIELIVCITEGIPTLDMLEAKEYVDRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDHGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D +TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPSTEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A+IG +L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLAQIGDALKEVTG 289 >gi|50120303|ref|YP_049470.1| succinyl-CoA synthetase subunit alpha [Pectobacterium atrosepticum SCRI1043] gi|49610829|emb|CAG74274.1| succinyl-CoA synthetase alpha chain [Pectobacterium atrosepticum SCRI1043] Length = 290 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKNTKVICQGFTGSQGTFHSEQALAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLTVKVKLDQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQS+ Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA+++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAEYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKAILAR 290 >gi|90411602|ref|ZP_01219612.1| succinyl-CoA synthetase alpha subunit [Photobacterium profundum 3TCK] gi|90327492|gb|EAS43845.1| succinyl-CoA synthetase alpha subunit [Photobacterium profundum 3TCK] Length = 290 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 180/298 (60%), Positives = 225/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T +++PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVSPGKGGTTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP DAI+E+I+A I LIV ITEGIP LD++ VK RL+++ Sbjct: 56 TVREAVEETGATASVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTLDLLDVKVRLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPGHIHQKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++EAG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEEAGVKTVKSLADIGKALREVTG 289 >gi|67459056|ref|YP_246680.1| succinyl-CoA synthetase subunit alpha [Rickettsia felis URRWXCal2] gi|75536510|sp|Q4ULQ8|SUCD_RICFE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|67004589|gb|AAY61515.1| Succinyl-CoA synthetase alpha chain [Rickettsia felis URRWXCal2] Length = 292 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 181/299 (60%), Positives = 234/299 (78%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K TKV+ QG TG GTFH+EQAI Y T +VGG+ P KG +++PV+ Sbjct: 1 MAILINKKTKVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGHTH----LDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+AEI ++VCITEGIPVLDMV+VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMVKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +++FL D+ T++I+M+GEIGG+AEE+AA+F+K KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIDMFLKDDETKAIIMIGEIGGNAEEDAAEFIKQSKI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPG+ MGHAGA+I+GGKG AEDK+ A++ AG+ I SPA IG+++ +LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIAGGKGSAEDKLEALQSAGVTITRSPADIGKTMFDLLNK 291 >gi|163869363|ref|YP_001610619.1| succinyl-CoA synthetase subunit alpha [Bartonella tribocorum CIP 105476] gi|161019066|emb|CAK02624.1| succinyl-CoA synthetase, alpha chain [Bartonella tribocorum CIP 105476] Length = 300 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 230/298 (77%), Positives = 272/298 (91%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGG++PKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGVNPKKGGETWEGSKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAEAKE+T A+ASVIYVPP+GA AI+E+IEAE+ LI+CITEGIPV+DMV+VKARLE Sbjct: 61 ASVAEAKEKTGADASVIYVPPAGAAAAILEAIEAEVRLIICITEGIPVMDMVKVKARLEN 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGILTP+ CKIGIMPGSIFRKGSVG++SRSGTLTYEAVFQTSQEGLGQ+T Sbjct: 121 SKSRLIGPNCPGILTPNECKIGIMPGSIFRKGSVGVVSRSGTLTYEAVFQTSQEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEEEAAQFL+DEA++GRKKP+ Sbjct: 181 AIGIGGDPVKGTEFIDVLEMFLADDETQSIVMIGEIGGSAEEEAAQFLQDEARKGRKKPV 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSP++IG++L+ +L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPSQIGKTLMSVL 298 >gi|332288474|ref|YP_004419326.1| succinyl-CoA synthetase subunit alpha [Gallibacterium anatis UMN179] gi|330431370|gb|AEC16429.1| succinyl-CoA synthetase subunit alpha [Gallibacterium anatis UMN179] Length = 289 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 182/298 (61%), Positives = 225/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP G DAI+E+I+A I LIVCITEGIP DM+ VK +L ++ Sbjct: 56 TVREAVEATGATASVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTEDMLVVKQKLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMP I +KGS+GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPAHIHKKGSIGIVSRSGTLTYEAVKQTTDEGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF AD T++IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSSFIDILKLFQADPETKAIVMIGEIGGSAEEEAAAYIKQNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S A IG++L E+LG Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKYAALEAAGVRTVRSLADIGKALREILG 289 >gi|15237260|ref|NP_197716.1| succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative [Arabidopsis thaliana] gi|56754629|sp|Q8LAD2|SUCA2_ARATH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha-2; Short=SCS-alpha-2; Flags: Precursor gi|10177814|dbj|BAB11180.1| succinyl-CoA synthetase, alpha subunit [Arabidopsis thaliana] gi|20260190|gb|AAM12993.1| succinyl-CoA synthetase, alpha subunit [Arabidopsis thaliana] gi|21387045|gb|AAM47926.1| succinyl-CoA synthetase alpha subunit [Arabidopsis thaliana] gi|332005758|gb|AED93141.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-2 [Arabidopsis thaliana] Length = 341 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 184/299 (61%), Positives = 224/299 (74%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++V G+ PKKG T G +PVF T Sbjct: 46 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVAGVTPKKGGTEHLG----LPVFNT 100 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEAK T ANASVIYVP A AI+E + AE+ LIVCITEGIP DMVRVKA L +S Sbjct: 101 VAEAKAETKANASVIYVPAPFAAAAIMEGLAAELDLIVCITEGIPQHDMVRVKAALNSQS 160 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 161 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTC 220 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F D TE IV++GEIGG+AEE+AA +K+ G KP+V Sbjct: 221 VGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIKEN---GTDKPVV 277 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA++SGGKG A+DKI ++++AG+ + SPA+IG ++ EL Sbjct: 278 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKSLRDAGVKVVESPAKIGAAMFELFQE 336 >gi|91793534|ref|YP_563185.1| succinyl-CoA synthetase, alpha subunit [Shewanella denitrificans OS217] gi|91715536|gb|ABE55462.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella denitrificans OS217] Length = 290 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 174/294 (59%), Positives = 219/294 (74%), Gaps = 9/294 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVSPGKGGQVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A A+VIYVP DAI+E+I+A I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVAETGATATVIYVPAPFCKDAILEAIDAGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGRVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPKTEAIVMIGEIGGNAEEEAAEYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKALR 285 >gi|77360585|ref|YP_340160.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Pseudoalteromonas haloplanktis TAC125] gi|76875496|emb|CAI86717.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Pseudoalteromonas haloplanktis TAC125] Length = 290 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQALEY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP DAI+E+I+A I LIVCITEGIP LDMV VK +L+++ Sbjct: 56 TVREAVQETGATASVIYVPAPFCKDAILEAIDAGIELIVCITEGIPTLDMVDVKIKLDQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP KIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GTRMIGPNCPGVITPGETKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFEKDPQTEAIVMIGEIGGTAEEEAAEYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG++L E G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGKALKEKTG 289 >gi|323135996|ref|ZP_08071079.1| succinyl-CoA synthetase, alpha subunit [Methylocystis sp. ATCC 49242] gi|322399087|gb|EFY01606.1| succinyl-CoA synthetase, alpha subunit [Methylocystis sp. ATCC 49242] Length = 294 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 213/298 (71%), Positives = 258/298 (86%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TGK TFH+ QA+ Y T++VGG+ P KG + +++PVF Sbjct: 1 MSVLIDKNTKVITQGFTGKTATFHSVQAMDY-GTKMVGGVSPGKGGSTH----LDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E+T A+ASV+YVPP GA DAI E+IEAEIPLIVCITEG+PV DM+RVK L S Sbjct: 56 TVAEAREKTGADASVVYVPPPGAADAICEAIEAEIPLIVCITEGVPVQDMIRVKRALCGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T KIGIMPG+IF +GSVG++SRSGTLTYEAVFQT++EGLGQ++A Sbjct: 116 KSRLIGPNCPGVVTAGESKIGIMPGNIFSRGSVGVVSRSGTLTYEAVFQTTREGLGQTSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGT+FI+VLELFLADEAT+SI+M+GEIGGSAEEEAAQFLKDEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTDFIEVLELFLADEATKSIIMIGEIGGSAEEEAAQFLKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+ISGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGDAESKIAAMESAGIRVSPSPARLGKTLVEVLK 293 >gi|118479057|ref|YP_896208.1| succinyl-CoA synthetase subunit alpha [Bacillus thuringiensis str. Al Hakam] gi|196047753|ref|ZP_03114949.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus 03BB108] gi|118418282|gb|ABK86701.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Bacillus thuringiensis str. Al Hakam] gi|196021412|gb|EDX60123.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus 03BB108] Length = 300 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 180/299 (60%), Positives = 231/299 (77%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTDIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++AEI L+VCITEGIPVLDMV VK ++ Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAEIDLVVCITEGIPVLDMVNVKRYMDGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 HTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPAGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVLKE 290 >gi|54308244|ref|YP_129264.1| succinyl-CoA synthetase subunit alpha [Photobacterium profundum SS9] gi|46912672|emb|CAG19462.1| putative succinyl-CoA synthase, alpha subunit [Photobacterium profundum SS9] Length = 290 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 180/298 (60%), Positives = 225/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP DAI+E+I+A I LIV ITEGIP LD++ VK RL+++ Sbjct: 56 TVREAVEETGATASVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTLDLLDVKVRLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMPG+I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPGNIHQKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEDAGVKTVKSLADIGKALREVTG 289 >gi|322514064|ref|ZP_08067135.1| succinyl-CoA synthetase subunit alpha [Actinobacillus ureae ATCC 25976] gi|322120081|gb|EFX92052.1| succinyl-CoA synthetase subunit alpha [Actinobacillus ureae ATCC 25976] Length = 290 Score = 328 bits (841), Expect = 5e-88, Method: Composition-based stats. Identities = 183/299 (61%), Positives = 226/299 (75%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGGI P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGISPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A SVIYVP G DAI+E+I+A I LIVCITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVEKTGATTSVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMLIVKQKLKES 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPGI+TPD CKIGIMP I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGIITPDECKIGIMPAHIHKKGKIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF +D TE+IVM+GEIGG+AEEEAA+F+K KP+V Sbjct: 176 VGIGGDPIPGSSFIDILKLFQSDPETEAIVMIGEIGGTAEEEAAEFIKMHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG +L ELL Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFKALEQAGVKTVRSLAEIGAALNELLNK 290 >gi|153008267|ref|YP_001369482.1| succinyl-CoA synthetase subunit alpha [Ochrobactrum anthropi ATCC 49188] gi|151560155|gb|ABS13653.1| succinyl-CoA synthetase, alpha subunit [Ochrobactrum anthropi ATCC 49188] Length = 300 Score = 328 bits (841), Expect = 5e-88, Method: Composition-based stats. Identities = 238/299 (79%), Positives = 272/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGQKGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAEAKERT A+ASVIYVPP+GA DAIIE+IEAEIP IVCITEGIPV+DMVRVK RLE+ Sbjct: 61 ATVAEAKERTGADASVIYVPPAGAADAIIEAIEAEIPFIVCITEGIPVMDMVRVKERLER 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G++LVE+L Sbjct: 241 VGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVLK 299 >gi|297584025|ref|YP_003699805.1| succinyl-CoA synthetase subunit alpha [Bacillus selenitireducens MLS10] gi|297142482|gb|ADH99239.1| succinyl-CoA synthetase, alpha subunit [Bacillus selenitireducens MLS10] Length = 303 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 232/299 (77%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+VQG+TG G FHT+QAI Y T +VGG+ P KG T G VPVF Sbjct: 1 MSILINKDTKVIVQGITGATGLFHTKQAIEY-GTNIVGGVTPGKGGTEIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A + T A+ASVIYVPP A DAI+E+ +A + +++ ITEGIPV DM++VK +E Sbjct: 56 TVSDAVKETGAHASVIYVPPPFAADAIMEATDAGVDVVITITEGIPVTDMIKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S EG+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSTEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FIDVL++F D TE+++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTDFIDVLKMFNEDPDTEAVIMIGEIGGTAEEEAAEWIKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI + AG+ +A +PA +G +L+++L Sbjct: 232 GFIGGRTAPPGKRMGHAGAIISGGKGTADEKIKTLNAAGVQVADTPAVMGETLIKVLKE 290 >gi|190149797|ref|YP_001968322.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252121|ref|ZP_07338289.1| succinyl-CoA synthetase alpha chain [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247457|ref|ZP_07529502.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307263117|ref|ZP_07544738.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914928|gb|ACE61180.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648904|gb|EFL79092.1| succinyl-CoA synthetase alpha chain [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855960|gb|EFM88118.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306871479|gb|EFN03202.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 290 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 184/297 (61%), Positives = 225/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTKLVGGVSPNKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A ASVIYVP G DAI+E+I+A I LIVCITEGIP LDMV VK +L++S Sbjct: 56 TVREAVEKTGATASVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMVCVKQKLKES 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPGI+TPD CKIGIMP I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGIITPDECKIGIMPAHIHKKGKIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF AD TE+IVM+GEIGGSAEEEAA+F+K KP+V Sbjct: 176 VGIGGDPIPGSSFIDILKLFQADPETEAIVMIGEIGGSAEEEAAEFIKMHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG A++K ++ AG+ S A IG +L ELL Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFKTLENAGVKTVRSLAEIGSALRELL 288 >gi|307130100|ref|YP_003882116.1| succinyl-CoA synthetase, NAD(P)-binding, subunit alpha [Dickeya dadantii 3937] gi|306527629|gb|ADM97559.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Dickeya dadantii 3937] Length = 290 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 179/299 (59%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG G+FH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGSFHSEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +LE+S Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLTVKVKLEQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP +CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGACKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +LG Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKAVLGR 290 >gi|157692289|ref|YP_001486751.1| succinyl-CoA synthetase subunit alpha [Bacillus pumilus SAFR-032] gi|194014871|ref|ZP_03053488.1| succinate-CoA ligase, alpha subunit subfamily [Bacillus pumilus ATCC 7061] gi|157681047|gb|ABV62191.1| succinate--CoA ligase (ADP-forming) alpha subunit [Bacillus pumilus SAFR-032] gi|194013897|gb|EDW23462.1| succinate-CoA ligase, alpha subunit subfamily [Bacillus pumilus ATCC 7061] Length = 300 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 174/299 (58%), Positives = 229/299 (76%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++KNT+V+VQG+TG FHT+Q I Y T +VGG+ P KG T G VPVF Sbjct: 1 MSVFINKNTRVIVQGITGSTALFHTKQMIEY-GTNIVGGVTPGKGGTEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA + T ANASVIYVP A DAI+E+++AE+ L++CITE IPVLDMV+VK +E Sbjct: 56 TVSEAVQTTGANASVIYVPAPFAADAILEAVDAEVDLVICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S+ G+GQSTA Sbjct: 116 KTRLVGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGVGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPDTHAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ GKTAPPG+ MGHAGA+ISGGKG A++K+ M+E GI +A +P+ +G +L+++L Sbjct: 232 GFIGGKTAPPGKRMGHAGAIISGGKGTADEKVKTMRECGIEVAETPSVMGETLIKVLKE 290 >gi|229162771|ref|ZP_04290728.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus R309803] gi|228620653|gb|EEK77522.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus R309803] Length = 300 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 180/299 (60%), Positives = 230/299 (76%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTDIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++AEI L+VCITEGIPVLDMV VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAEIDLVVCITEGIPVLDMVNVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 HTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPEGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVLKE 290 >gi|239993690|ref|ZP_04714214.1| Succinyl-CoA synthetase, alpha subunit [Alteromonas macleodii ATCC 27126] gi|332141300|ref|YP_004427038.1| Succinyl-CoA synthetase, alpha subunit [Alteromonas macleodii str. 'Deep ecotype'] gi|327551322|gb|AEA98040.1| Succinyl-CoA synthetase, alpha subunit [Alteromonas macleodii str. 'Deep ecotype'] Length = 290 Score = 328 bits (841), Expect = 7e-88, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+ +A I LIVCITEGIP LDM+ VK +E Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSIVEAADAGIELIVCITEGIPTLDMLYVKEYVEAK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILQMFQDDPQTEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+I+GGKG A++K A+++AG+ S A IG++L E G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIIAGGKGTADEKFKALEDAGVKTVRSLAEIGKALRETTG 289 >gi|306843376|ref|ZP_07475977.1| succinyl-CoA synthetase, alpha subunit [Brucella sp. BO1] gi|306276067|gb|EFM57767.1| succinyl-CoA synthetase, alpha subunit [Brucella sp. BO1] Length = 300 Score = 328 bits (841), Expect = 7e-88, Method: Composition-based stats. Identities = 236/299 (78%), Positives = 270/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGSKGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KERT A+ASVIYVPP+GA DAIIE+IEAEI IVCITEGIPV+DMVRVK RLE+ Sbjct: 61 ATVAEGKERTGADASVIYVPPAGAADAIIEAIEAEIRFIVCITEGIPVMDMVRVKERLER 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G++LVE+L Sbjct: 241 VGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVLK 299 >gi|32034771|ref|ZP_00134896.1| COG0074: Succinyl-CoA synthetase, alpha subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207935|ref|YP_001053160.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae L20] gi|165975910|ref|YP_001651503.1| succinyl-CoA synthetase alpha chain [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303250243|ref|ZP_07336443.1| succinyl-CoA synthetase alpha chain [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307245290|ref|ZP_07527378.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307252008|ref|ZP_07533908.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307254239|ref|ZP_07536080.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307256505|ref|ZP_07538286.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307258701|ref|ZP_07540433.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260933|ref|ZP_07542617.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|126096727|gb|ABN73555.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165876011|gb|ABY69059.1| succinyl-CoA synthetase alpha chain [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302650859|gb|EFL81015.1| succinyl-CoA synthetase alpha chain [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306853631|gb|EFM85848.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306860477|gb|EFM92490.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306862786|gb|EFM94739.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306864915|gb|EFM96817.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306867052|gb|EFM98908.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869372|gb|EFN01165.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 290 Score = 328 bits (841), Expect = 7e-88, Method: Composition-based stats. Identities = 183/297 (61%), Positives = 225/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTKLVGGVSPNKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A ASVIYVP G DAI+E+I+A I LIVCITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVEKTGATASVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMICVKQKLKES 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPGI+TPD CKIGIMP I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGIITPDECKIGIMPAHIHKKGKIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF AD TE+IVM+GEIGGSAEEEAA+F+K KP+V Sbjct: 176 VGIGGDPIPGSSFIDILKLFQADPETEAIVMIGEIGGSAEEEAAEFIKMHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG A++K ++ AG+ S A IG +L ELL Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFKTLENAGVKTVRSLAEIGSALRELL 288 >gi|218529902|ref|YP_002420718.1| succinyl-CoA synthetase, subunit alpha [Methylobacterium chloromethanicum CM4] gi|240138206|ref|YP_002962678.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium extorquens AM1] gi|218522205|gb|ACK82790.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium chloromethanicum CM4] gi|240008175|gb|ACS39401.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium extorquens AM1] Length = 295 Score = 328 bits (840), Expect = 7e-88, Method: Composition-based stats. Identities = 222/299 (74%), Positives = 255/299 (85%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+NTKV+ QG TGK GTFH+EQAI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDQNTKVICQGFTGKNGTFHSEQAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E T A+ASV+YVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK LE S Sbjct: 56 TVAEAREATGADASVVYVPPPGAADAICEAIQAEIPLIVCITEGIPVLDMVRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T KIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+ EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVVTAGQSKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTVEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFI +LELFLAD TESIVM+GEIGGSAEEEAAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFISMLELFLADPKTESIVMIGEIGGSAEEEAAQFLADEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPAR+G +LV++L S Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPARLGSTLVDVLKS 294 >gi|37679219|ref|NP_933828.1| succinyl-CoA synthetase subunit alpha [Vibrio vulnificus YJ016] gi|320157038|ref|YP_004189417.1| succinyl-CoA ligase (ADP-forming) subunit beta [Vibrio vulnificus MO6-24/O] gi|37197962|dbj|BAC93799.1| succinyl-CoA synthetase, alpha subunit [Vibrio vulnificus YJ016] gi|319932350|gb|ADV87214.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio vulnificus MO6-24/O] Length = 290 Score = 328 bits (840), Expect = 7e-88, Method: Composition-based stats. Identities = 177/298 (59%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQALAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A++ AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALESAGVKTVKSLADIGQALREVTG 289 >gi|167624408|ref|YP_001674702.1| succinyl-CoA synthetase subunit alpha [Shewanella halifaxensis HAW-EB4] gi|167354430|gb|ABZ77043.1| succinyl-CoA synthetase, alpha subunit [Shewanella halifaxensis HAW-EB4] Length = 290 Score = 328 bits (840), Expect = 7e-88, Method: Composition-based stats. Identities = 178/298 (59%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVEVTGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPLTEAIVMIGEIGGTAEEEAAEYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++EAG+ S A IG++L G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFAALEEAGVTTVRSLADIGKALRTKTG 289 >gi|91206042|ref|YP_538397.1| succinyl-CoA synthetase subunit alpha [Rickettsia bellii RML369-C] gi|122425252|sp|Q1RH56|SUCD_RICBR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|91069586|gb|ABE05308.1| Succinyl-CoA synthetase alpha chain [Rickettsia bellii RML369-C] Length = 291 Score = 328 bits (840), Expect = 7e-88, Method: Composition-based stats. Identities = 186/297 (62%), Positives = 233/297 (78%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+K TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG +++P++ Sbjct: 1 MAILVNKKTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGKTH----LDLPIYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+A I ++VCITEGIPVLDMVRVK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPPFAADSILEAIDAGIEIVVCITEGIPVLDMVRVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TPD CKIGIMPG I RKGS+GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 RTRLIGPNCPGIITPDECKIGIMPGHIHRKGSIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +++FL D+ T++I+M+GEIGG AEE AA F+K KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIDMFLQDDETKAIIMIGEIGGDAEENAADFIKHSKI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPG+ MGHAGA+I+GGKG AEDK+ A++ AG+ I SPA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIAGGKGSAEDKLEALQSAGVTITRSPADIGKTMLDLL 289 >gi|157826591|ref|YP_001495655.1| succinyl-CoA synthetase subunit alpha [Rickettsia bellii OSU 85-389] gi|157801895|gb|ABV78618.1| succinyl-CoA synthetase subunit alpha [Rickettsia bellii OSU 85-389] Length = 291 Score = 328 bits (840), Expect = 8e-88, Method: Composition-based stats. Identities = 185/297 (62%), Positives = 233/297 (78%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+K TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG +++P++ Sbjct: 1 MAILVNKKTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGKTH----LDLPIYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+A I ++VCITEGIPVLDMVRVK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPPFAADSILEAIDAGIEIVVCITEGIPVLDMVRVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TPD CKIGIMPG I RKGS+GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 RTRLIGPNCPGIITPDECKIGIMPGHIHRKGSIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F+D +++FL D+ T++I+M+GEIGG AEE AA F+K KKPIV Sbjct: 176 VGIGGDPINGTNFVDCIDMFLQDDETKAIIMIGEIGGDAEENAADFIKHSKI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPG+ MGHAGA+I+GGKG AEDK+ A++ AG+ I SPA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIAGGKGSAEDKLEALQSAGVTITRSPADIGKTMLDLL 289 >gi|229844848|ref|ZP_04464986.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae 6P18H1] gi|229812229|gb|EEP47920.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae 6P18H1] Length = 293 Score = 328 bits (840), Expect = 8e-88, Method: Composition-based stats. Identities = 183/299 (61%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPAPFCKDAIIEAIDAGIKLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPIPGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|149374982|ref|ZP_01892755.1| succinyl-CoA synthetase, alpha subunit [Marinobacter algicola DG893] gi|149360871|gb|EDM49322.1| succinyl-CoA synthetase, alpha subunit [Marinobacter algicola DG893] Length = 290 Score = 328 bits (840), Expect = 8e-88, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGAQGTFHSEQAIEY-GTKMVGGVSPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A A+VIYVP DAI+E+ +A I LIVCITEGIP +DM+ K +++ Sbjct: 56 TVREAVEKTGAEATVIYVPAPFCKDAIVEAADAGIQLIVCITEGIPTIDMLYAKEYVDRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG+I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGNIHKPGKVGIVSRSGTLTYEAVKQTTDFGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+L D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILQLLQDDPQTEAIVMIGEIGGTAEEEAAAFIKENVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+ +AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALNDAGVKTVRSLAEIGKALKEVTG 289 >gi|27363637|ref|NP_759165.1| succinyl-CoA synthetase subunit alpha [Vibrio vulnificus CMCP6] gi|27359753|gb|AAO08692.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio vulnificus CMCP6] Length = 290 Score = 328 bits (840), Expect = 8e-88, Method: Composition-based stats. Identities = 177/298 (59%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQALAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A++ AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALESAGVKTVKSLAEIGQALREVTG 289 >gi|15602146|ref|NP_245218.1| hypothetical protein PM0281 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720513|gb|AAK02365.1| SucD [Pasteurella multocida subsp. multocida str. Pm70] Length = 289 Score = 328 bits (840), Expect = 8e-88, Method: Composition-based stats. Identities = 178/298 (59%), Positives = 225/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A ASVIYVP G DAI+E+I+A I L++CITEGIP LDM++VK RL ++ Sbjct: 56 TVRDAVDATGATASVIYVPAPGCKDAILEAIDAGIQLVICITEGIPTLDMLQVKQRLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP+ CKIGIMPG+I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPEECKIGIMPGNIHKKGKIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQDDPQTEAIVMIGEIGGSAEEEAAAFIKDYV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S A IG +L LL Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEAAGVKTVRSLAEIGAALKALLK 289 >gi|114321695|ref|YP_743378.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Alkalilimnicola ehrlichii MLHE-1] gi|114228089|gb|ABI57888.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Alkalilimnicola ehrlichii MLHE-1] Length = 290 Score = 328 bits (840), Expect = 8e-88, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 224/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKV+VQG TGK GTFH EQAI Y T VVGG+ P +G +++PVF Sbjct: 1 MSVLVDKNTKVIVQGFTGKQGTFHAEQAIAY-GTNVVGGVTPGRGGQTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A+AS+IYVP + A DAI+E+ +A I +I CITEGIPVLDM++VKA L + Sbjct: 56 TVEDAVQETGADASMIYVPAAFAADAILEAADAGIKVIACITEGIPVLDMLKVKAALAQY 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I + GS+GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 DARLIGPNCPGVITPGECKIGIMPGHIHKAGSIGIVSRSGTLTYEAVKQTTDIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G FID LELF AD T+ IVMVGEIGG+AEEEAA++++ KP+V Sbjct: 176 IGIGGDPIHGMSFIDALELFQADPQTKGIVMVGEIGGTAEEEAAEYIQQNV----DKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+I+GGKG A+DK A++ AG+ SPA IG+ L EL Sbjct: 232 AYIAGVTAPPGKRMGHAGAIIAGGKGTADDKFAALESAGVATVRSPAEIGQKLNELFS 289 >gi|120554085|ref|YP_958436.1| succinyl-CoA synthetase, alpha subunit [Marinobacter aquaeolei VT8] gi|120323934|gb|ABM18249.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Marinobacter aquaeolei VT8] Length = 290 Score = 328 bits (840), Expect = 8e-88, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGAQGTFHSEQAIAY-GTKMVGGVSPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A A+VIYVP DAIIE+ +A I LIVCITEGIP +DM+ K +++ Sbjct: 56 TVREAVEKTGAEATVIYVPAPFCKDAIIEAADAGIQLIVCITEGIPTIDMLYAKEYVDRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDFGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G+ FID+L+L D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 IGIGGDPIPGSNFIDILKLLQEDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLAEIGKALKEVTG 289 >gi|227114766|ref|ZP_03828422.1| succinyl-CoA synthetase subunit alpha [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 290 Score = 328 bits (840), Expect = 9e-88, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 221/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKNTKVICQGFTGSQGTFHSEQALAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLTVKVKLDQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQS+ Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKAILSR 290 >gi|317129220|ref|YP_004095502.1| succinyl-CoA synthetase, subunit alpha [Bacillus cellulosilyticus DSM 2522] gi|315474168|gb|ADU30771.1| succinyl-CoA synthetase, alpha subunit [Bacillus cellulosilyticus DSM 2522] Length = 301 Score = 328 bits (840), Expect = 9e-88, Method: Composition-based stats. Identities = 179/299 (59%), Positives = 232/299 (77%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI+++K+TK++VQG+TG G FHT+QAI Y T VVGG+ P KG T G VPVF Sbjct: 1 MSIMINKDTKLIVQGITGATGLFHTKQAIEY-GTNVVGGVTPGKGGTEVEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A E T ANASVIYVPP A DAI+E+ +A + L++ ITEGIPV DM++VK LE Sbjct: 56 TVSQAVEATGANASVIYVPPPFAADAIMEATDAGVELVITITEGIPVTDMIKVKRYLEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S EG+GQSTA Sbjct: 116 NTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSTEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+LF DE T +++M+GEIGG+AEEEAA+++K+ KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKLFNEDEDTYAVIMIGEIGGTAEEEAAEWIKENM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI ++ AG+ +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTASEKIKTLENAGVKVAETPAVMGETLISVLKE 290 >gi|220933989|ref|YP_002512888.1| succinyl-CoA synthetase, alpha subunit [Thioalkalivibrio sp. HL-EbGR7] gi|219995299|gb|ACL71901.1| succinyl-CoA synthetase, alpha subunit [Thioalkalivibrio sp. HL-EbGR7] Length = 288 Score = 328 bits (840), Expect = 9e-88, Method: Composition-based stats. Identities = 176/297 (59%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+V+ QG TGK GTFH+EQAI Y T++VGG+ P KG ++++PVF Sbjct: 1 MSILIDKDTRVICQGFTGKQGTFHSEQAIAY-GTRMVGGVTPGKGGQ----KHLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A A++IYVP A DAI+E+++A I +IVCITEGIPVLDM+RVKA L S Sbjct: 56 TVHDAVRDTGAEATMIYVPAPFAADAILEAMDAGIQVIVCITEGIPVLDMLRVKAALAHS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 DARLIGPNCPGVITPGGCKIGIMPGHIHQPGRVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP++G F+D L LF AD TE I++VGEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIQGMNFVDCLALFQADPQTEGIILVGEIGGTAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAPPGR MGHAGA+ISGG+G AE K A++ AG+ + SPA +G + LL Sbjct: 232 AYIAGVTAPPGRRMGHAGAIISGGQGTAEQKFAALEAAGVSVVRSPAEMGERMKTLL 288 >gi|117618581|ref|YP_856461.1| succinyl-CoA synthetase alpha chain [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559988|gb|ABK36936.1| succinyl-CoA synthetase alpha chain [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 290 Score = 327 bits (839), Expect = 9e-88, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+A I LIV ITEGIP LDM+ VK +L+++ Sbjct: 56 TVRDAVEATGATASVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTLDMLDVKVKLQET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGG+AEE+AA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFQNDPQTEAIVMIGEIGGNAEEDAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A +K A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAAEKFAALEDAGVKTVRSLADIGKALREVTG 289 >gi|15966807|ref|NP_387160.1| succinyl-CoA synthetase subunit alpha [Sinorhizobium meliloti 1021] gi|307301635|ref|ZP_07581394.1| succinyl-CoA synthetase, alpha subunit [Sinorhizobium meliloti BL225C] gi|307316341|ref|ZP_07595785.1| succinyl-CoA synthetase, alpha subunit [Sinorhizobium meliloti AK83] gi|15076079|emb|CAC47633.1| Probable succinyl-CoA synthetase alpha chain [Sinorhizobium meliloti 1021] gi|306898181|gb|EFN28923.1| succinyl-CoA synthetase, alpha subunit [Sinorhizobium meliloti AK83] gi|306903333|gb|EFN33922.1| succinyl-CoA synthetase, alpha subunit [Sinorhizobium meliloti BL225C] Length = 300 Score = 327 bits (839), Expect = 9e-88, Method: Composition-based stats. Identities = 239/299 (79%), Positives = 273/299 (91%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSIL++K+TKVLVQGLTGK GTFHTEQA+ Y T++VGGIHPKKG WTG +P+F Sbjct: 1 MSILINKDTKVLVQGLTGKTGTFHTEQALAYNGTKMVGGIHPKKGGETWTGAKGEQLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE ++ T ANASVIYVPP+GA AIIE+I+AEIPLIVCITEGIPV DMV+VKARLEK Sbjct: 61 ATVAEGRDATGANASVIYVPPAGAAAAIIEAIDAEIPLIVCITEGIPVADMVKVKARLEK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SSSRLIGPNCPG+LTPD CKIGIMPG+IFRKGSVG+LSRSGTLTYEAVFQT+ EGLGQ+T Sbjct: 121 SSSRLIGPNCPGVLTPDECKIGIMPGNIFRKGSVGVLSRSGTLTYEAVFQTTNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SI+M+GEIGGSAEEEAAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIIMIGEIGGSAEEEAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPARLGKTLVEVLK 299 >gi|146337551|ref|YP_001202599.1| succinyl-CoA synthetase subunit alpha, NAD(P)-binding [Bradyrhizobium sp. ORS278] gi|146190357|emb|CAL74353.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Bradyrhizobium sp. ORS278] Length = 294 Score = 327 bits (839), Expect = 9e-88, Method: Composition-based stats. Identities = 216/299 (72%), Positives = 250/299 (83%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TGK GTFH+E AI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+E T A+ASVIYVPP GA DAI E+I+AE+PLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVKEAREATGADASVIYVPPPGAADAICEAIDAEVPLIVCITEGIPVLDMVRVKRSLVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+ EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVMTAGECKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTSEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFID+LE+FLAD TESI+M+GEIGGSAEE+AAQF+KDEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDMLEMFLADPKTESIIMIGEIGGSAEEDAAQFIKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++LVE L S Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAGSKTAAMEAAGITVSPSPARLGKTLVEKLKS 294 >gi|148559537|ref|YP_001259749.1| succinyl-CoA synthetase subunit alpha [Brucella ovis ATCC 25840] gi|148370794|gb|ABQ60773.1| succinyl-CoA synthetase, alpha subunit [Brucella ovis ATCC 25840] Length = 300 Score = 327 bits (839), Expect = 9e-88, Method: Composition-based stats. Identities = 237/299 (79%), Positives = 271/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGSKGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TTVAE KERT A+ASVIYVPP+GA DAIIE+IEAEI IVCITEGIPV+DMVRVK RLE+ Sbjct: 61 TTVAEGKERTGADASVIYVPPAGAADAIIEAIEAEIGFIVCITEGIPVMDMVRVKERLER 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G++LVE+L Sbjct: 241 VGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVLK 299 >gi|260772362|ref|ZP_05881278.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio metschnikovii CIP 69.14] gi|260611501|gb|EEX36704.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio metschnikovii CIP 69.14] Length = 290 Score = 327 bits (839), Expect = 9e-88, Method: Composition-based stats. Identities = 178/298 (59%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQALAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP +DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTIDMIDVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQDDPETEAIVMIGEIGGTAEEEAAAFIKQHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AE+K A++ AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAALESAGVKTVKSLADIGQALREVTG 289 >gi|304311201|ref|YP_003810799.1| Succinyl-CoA ligase, alpha subunit [gamma proteobacterium HdN1] gi|301796934|emb|CBL45147.1| Succinyl-CoA ligase, alpha subunit [gamma proteobacterium HdN1] Length = 290 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 175/298 (58%), Positives = 224/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QGLTG GT H++QA+ Y T++VGG+ P KG T+ G +PVF Sbjct: 1 MSVLINKDTKVICQGLTGSQGTMHSQQAMEY-GTKMVGGVTPGKGGTHHIG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E T A+ASVIYVP + D+I+E+ +A +PLIVCITEGIP LDM+ VK + Sbjct: 56 TVAEAREATGADASVIYVPAAFCKDSILEAADAGVPLIVCITEGIPALDMLYVKEYVMAK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+TP CKIGIMPG I G VGI+SRSGTLTYE V QT+ G GQST Sbjct: 116 GLRLIGPNCPGIITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYECVAQTTVLGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+LF D TE+I+MVGEIGGSAEEEAA F+K+ KKP+V Sbjct: 176 IGIGGDPIPGTTFIDALKLFQDDPQTEAIIMVGEIGGSAEEEAAAFIKEYV----KKPMV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+I+GGKG A++K A+ +AG+ + +PA IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIIAGGKGTADEKFAALSDAGVAVCRNPAEIGKTLKEITG 289 >gi|150398139|ref|YP_001328606.1| succinyl-CoA synthetase subunit alpha [Sinorhizobium medicae WSM419] gi|150029654|gb|ABR61771.1| succinyl-CoA synthetase, alpha subunit [Sinorhizobium medicae WSM419] Length = 300 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 237/299 (79%), Positives = 273/299 (91%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSIL++K+TKVLVQGLTGK GTFHTEQA+ Y T++VGGIHPKKG WTG +P+F Sbjct: 1 MSILINKDTKVLVQGLTGKTGTFHTEQALAYNGTKMVGGIHPKKGGETWTGAKGEQLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE ++ T A+ASVIYVPP+GA AIIE+I+AEIPLIVCITEGIPV DMV+VKARL+K Sbjct: 61 ATVAEGRDATGADASVIYVPPAGAAAAIIEAIDAEIPLIVCITEGIPVADMVKVKARLDK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SSSRLIGPNCPG+LTPD CKIGIMPG+IFRKGSVG+LSRSGTLTYEAVFQT+ EGLGQ+T Sbjct: 121 SSSRLIGPNCPGVLTPDECKIGIMPGNIFRKGSVGVLSRSGTLTYEAVFQTTNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SI+M+GEIGGSAEEEAAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIIMIGEIGGSAEEEAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPARLGKTLVEVLK 299 >gi|260776536|ref|ZP_05885431.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio coralliilyticus ATCC BAA-450] gi|323495097|ref|ZP_08100184.1| succinyl-CoA synthetase subunit alpha [Vibrio brasiliensis LMG 20546] gi|260607759|gb|EEX34024.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio coralliilyticus ATCC BAA-450] gi|323310648|gb|EGA63825.1| succinyl-CoA synthetase subunit alpha [Vibrio brasiliensis LMG 20546] Length = 290 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 180/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGLITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREVTG 289 >gi|163752207|ref|ZP_02159409.1| succinyl-CoA synthase, alpha subunit [Shewanella benthica KT99] gi|161327888|gb|EDP99066.1| succinyl-CoA synthase, alpha subunit [Shewanella benthica KT99] Length = 290 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 178/294 (60%), Positives = 218/294 (74%), Gaps = 9/294 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAIDY-GTQMVGGVSPGKGGKVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKEAVAETGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLELF D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLELFQNDPQTEAIVMIGEIGGTAEEEAAEYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKALR 285 >gi|229152034|ref|ZP_04280229.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus m1550] gi|228631383|gb|EEK88017.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus m1550] Length = 300 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 180/299 (60%), Positives = 229/299 (76%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTDIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++AEI L+VCITEGIPVLDMV VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAEIDLVVCITEGIPVLDMVNVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 HTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L F DE T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALRAFNEDEETHAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPAGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVLKE 290 >gi|239833052|ref|ZP_04681381.1| succinyl-CoA synthetase, alpha subunit [Ochrobactrum intermedium LMG 3301] gi|239825319|gb|EEQ96887.1| succinyl-CoA synthetase, alpha subunit [Ochrobactrum intermedium LMG 3301] Length = 300 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 238/299 (79%), Positives = 272/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGAKGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAEAKERT A+ASVIYVPP+GA DAIIE+IEAEIP IVCITEGIPV+DMVRVK RLE+ Sbjct: 61 ATVAEAKERTGADASVIYVPPAGAADAIIEAIEAEIPFIVCITEGIPVMDMVRVKERLER 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G++LVE+L Sbjct: 241 VGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVLK 299 >gi|21593483|gb|AAM65450.1| succinyl-CoA synthetase, alpha subunit [Arabidopsis thaliana] Length = 341 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 183/299 (61%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++V G+ PKKG T G +PVF T Sbjct: 46 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVAGVTPKKGGTEHLG----LPVFNT 100 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEAK T ANASVIYVP A AI+E + AE+ LIVCITEGIP DMVRVKA L +S Sbjct: 101 VAEAKAETKANASVIYVPAPFAAAAIMEGLAAELDLIVCITEGIPQHDMVRVKAALNSQS 160 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 161 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTC 220 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F D TE IV++GEIGG+AEE+AA +K+ G KP+V Sbjct: 221 VGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIKEN---GTDKPVV 277 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA++SGGKG A+DK ++++AG+ + SPA+IG ++ EL Sbjct: 278 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKTKSLRDAGVKVVESPAKIGAAMFELFQE 336 >gi|13235375|emb|CAC33597.1| Succinyl-CoA synthetase alpha subunit [Rickettsia montanensis] Length = 292 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 181/299 (60%), Positives = 234/299 (78%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K T+V+ QG TG GTFH+EQAI Y T +VGG+ P KG +++PV+ Sbjct: 1 MAILINKKTQVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGHTH----LDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+AEI ++VCITEGIPVLDMV+VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMVKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTTVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +E+FL D+ T++I+M+GEIGG+AEE+AA+F+K KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDAAEFIKQSKI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPG+ MGHAGA+I+GG G AEDKI A++ AG+ I SPA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIAGGTGSAEDKIEALQSAGVTITRSPADIGKTMLDLLNK 291 >gi|86147658|ref|ZP_01065967.1| succinyl-CoA synthetase alpha subunit [Vibrio sp. MED222] gi|85834569|gb|EAQ52718.1| succinyl-CoA synthetase alpha subunit [Vibrio sp. MED222] Length = 290 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH++QAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSDQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP +DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTIDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGLITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA+F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAEFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREITG 289 >gi|251790491|ref|YP_003005212.1| succinyl-CoA synthetase subunit alpha [Dickeya zeae Ech1591] gi|247539112|gb|ACT07733.1| succinyl-CoA synthetase, alpha subunit [Dickeya zeae Ech1591] Length = 290 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 178/299 (59%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG G+FH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGSFHSEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +LE+S Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIQLIICITEGIPTLDMLTVKVKLEQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP +CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGACKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKSVLAR 290 >gi|152979224|ref|YP_001344853.1| succinyl-CoA synthetase, alpha subunit [Actinobacillus succinogenes 130Z] gi|150840947|gb|ABR74918.1| succinyl-CoA synthetase, alpha subunit [Actinobacillus succinogenes 130Z] Length = 289 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 177/298 (59%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNTKV+ QG TG GTFH+EQA+ Y T++VGG P KG T G +PVF Sbjct: 1 MSILINKNTKVICQGFTGGQGTFHSEQALAY-GTKLVGGTSPGKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T A ASVIYVP DAI+E+I+A I LIVCITEGIP LDM++VK +L+++ Sbjct: 56 TVREAVQKTGATASVIYVPAPFCKDAILEAIDAGIRLIVCITEGIPTLDMLQVKEKLDET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TP+ CKIGIMP +I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPEECKIGIMPANIHKKGCVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FI++L+ F D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSSFIEILQRFEDDPETEAIVMIGEIGGSAEEEAADFIKHHI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++EAG+ S A IG +L +LG Sbjct: 232 SYIAGITAPKGKRMGHAGAIISGGKGTAAEKIKALQEAGVTTVQSLADIGSALRNILG 289 >gi|323498618|ref|ZP_08103610.1| succinyl-CoA synthetase subunit alpha [Vibrio sinaloensis DSM 21326] gi|323316316|gb|EGA69335.1| succinyl-CoA synthetase subunit alpha [Vibrio sinaloensis DSM 21326] Length = 290 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQALAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGLITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREITG 289 >gi|90580057|ref|ZP_01235865.1| succinyl-CoA synthetase alpha subunit [Vibrio angustum S14] gi|90438942|gb|EAS64125.1| succinyl-CoA synthetase alpha subunit [Vibrio angustum S14] Length = 290 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 181/296 (61%), Positives = 225/296 (76%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIEY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP LDM+ VK RL+++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTLDMLDVKVRLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKAGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D ATE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPATEAIVMIGEIGGTAEEEAAAYIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++EAG+ S A IG++L E+ Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEEAGVKTVKSLADIGKALREV 287 >gi|91228431|ref|ZP_01262356.1| succinyl-CoA synthetase alpha subunit [Vibrio alginolyticus 12G01] gi|254229704|ref|ZP_04923113.1| succinyl-CoA synthetase alpha chain [Vibrio sp. Ex25] gi|262394880|ref|YP_003286734.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Vibrio sp. Ex25] gi|269967958|ref|ZP_06181998.1| succinyl-CoA synthetase alpha subunit [Vibrio alginolyticus 40B] gi|91188015|gb|EAS74322.1| succinyl-CoA synthetase alpha subunit [Vibrio alginolyticus 12G01] gi|151937749|gb|EDN56598.1| succinyl-CoA synthetase alpha chain [Vibrio sp. Ex25] gi|262338474|gb|ACY52269.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio sp. Ex25] gi|269827481|gb|EEZ81775.1| succinyl-CoA synthetase alpha subunit [Vibrio alginolyticus 40B] Length = 290 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAYIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLAEIGQGLREVTG 289 >gi|315126692|ref|YP_004068695.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding protein [Pseudoalteromonas sp. SM9913] gi|315015206|gb|ADT68544.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding protein [Pseudoalteromonas sp. SM9913] Length = 290 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQALEY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+A I LIVCITEGIP LDMV VK +L+++ Sbjct: 56 TVRDAVEATGATASVIYVPAPFCKDAILEAIDAGIDLIVCITEGIPTLDMVDVKVKLDQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP KIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GTRMIGPNCPGVITPGETKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D+ TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFEKDDQTEAIVMIGEIGGTAEEEAAEYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG++L E G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGKALKEKTG 289 >gi|301055325|ref|YP_003793536.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis CI] gi|300377494|gb|ADK06398.1| succinyl-CoA synthetase alpha subunit [Bacillus cereus biovar anthracis str. CI] Length = 300 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 180/299 (60%), Positives = 231/299 (77%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTDIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++AEI L+VCITEGIPVLDMV VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAEIDLVVCITEGIPVLDMVNVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 HTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L++F DE T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKVFNEDEETHAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPAGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVLKE 290 >gi|92116164|ref|YP_575893.1| succinyl-CoA synthetase, alpha subunit [Nitrobacter hamburgensis X14] gi|91799058|gb|ABE61433.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nitrobacter hamburgensis X14] Length = 294 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 211/299 (70%), Positives = 249/299 (83%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+NT+V+ QG TGK GTFH+E AI Y T++VGG P KG ++++PVF Sbjct: 1 MSILIDRNTRVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGG----NKHLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A+E T A+ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRV+ L S Sbjct: 56 TVRDAREATGADASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVRRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ G+VGI+SRSGTLTYEAVFQTSQEGLGQ+TA Sbjct: 116 KSRLIGPNCPGVVTAGECKIGIMPANIFKPGNVGIVSRSGTLTYEAVFQTSQEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFID+LE+FLAD T SIVM+GEIGGSAEE+AAQFL DEA+RGR KP+V Sbjct: 176 VGIGGDPVKGTEFIDILEMFLADPKTNSIVMIGEIGGSAEEDAAQFLIDEARRGRSKPVV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++LVE L S Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAASKTAAMEAAGITVSPSPARLGKTLVEKLKS 294 >gi|156934779|ref|YP_001438695.1| succinyl-CoA synthetase subunit alpha [Cronobacter sakazakii ATCC BAA-894] gi|156533033|gb|ABU77859.1| hypothetical protein ESA_02619 [Cronobacter sakazakii ATCC BAA-894] Length = 289 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 177/298 (59%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHQPGRVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDALKTILK 289 >gi|39933267|ref|NP_945543.1| succinyl-CoA synthetase subunit alpha [Rhodopseudomonas palustris CGA009] gi|39652892|emb|CAE25634.1| succinyl-CoA synthetase alpha-subunit [Rhodopseudomonas palustris CGA009] Length = 294 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 215/299 (71%), Positives = 249/299 (83%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NT+V+ QG TGK GTFH+E AI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDSNTRVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+++T A+ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVREARDKTGADASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRSLNGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ GSVGI+SRSGTLTYEAVFQTS EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVMTAGECKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTSAEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD+ TESI+M+GEIGGSAEE+AAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADDNTESIIMIGEIGGSAEEDAAQFLIDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++L E L S Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAASKTAAMEAAGITVSPSPARLGKTLAEKLKS 294 >gi|227327548|ref|ZP_03831572.1| succinyl-CoA synthetase subunit alpha [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 290 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKNTKVICQGFTGSQGTFHSEQALAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLTVKVKLDQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQS+ Sbjct: 116 GARMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKAILSR 290 >gi|84393475|ref|ZP_00992231.1| succinyl-CoA synthetase alpha subunit [Vibrio splendidus 12B01] gi|218710208|ref|YP_002417829.1| succinyl-CoA synthetase subunit alpha [Vibrio splendidus LGP32] gi|84375903|gb|EAP92794.1| succinyl-CoA synthetase alpha subunit [Vibrio splendidus 12B01] gi|218323227|emb|CAV19404.1| Succinyl-CoA synthetase alpha chain [Vibrio splendidus LGP32] Length = 290 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH++QAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSDQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGLITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA+F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAEFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREITG 289 >gi|154244113|ref|YP_001415071.1| succinyl-CoA synthetase, alpha subunit [Xanthobacter autotrophicus Py2] gi|154244448|ref|YP_001415406.1| succinyl-CoA synthetase, alpha subunit [Xanthobacter autotrophicus Py2] gi|154158198|gb|ABS65414.1| succinyl-CoA synthetase, alpha subunit [Xanthobacter autotrophicus Py2] gi|154158533|gb|ABS65749.1| succinyl-CoA synthetase, alpha subunit [Xanthobacter autotrophicus Py2] Length = 294 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 217/298 (72%), Positives = 255/298 (85%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+D NT+V+ QG TGK GTFH +QAI Y T++VGG P KG T +N+PVF Sbjct: 1 MSVLIDANTRVITQGFTGKNGTFHAQQAIAY-GTKMVGGTSPGKGGTTH----LNLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAKE T A+ASVIYVPP GA DAI+E+I+AEIPLIVCITEGIPVLDMV+VK L S Sbjct: 56 TVIEAKEATGADASVIYVPPPGAADAILEAIDAEIPLIVCITEGIPVLDMVKVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+T KIGIMP +IF+ GSVG++SRSGTLTYEAVFQTSQEGLGQ++A Sbjct: 116 KSRLVGPNCPGIVTAGQSKIGIMPANIFKTGSVGVVSRSGTLTYEAVFQTSQEGLGQTSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD TESI+M+GEIGGSAEEEAAQF+ DEAK+GRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADPKTESIIMIGEIGGSAEEEAAQFIADEAKKGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPARLGKTLVEVLK 293 >gi|152996808|ref|YP_001341643.1| succinyl-CoA synthetase subunit alpha [Marinomonas sp. MWYL1] gi|150837732|gb|ABR71708.1| succinyl-CoA synthetase, alpha subunit [Marinomonas sp. MWYL1] Length = 290 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A ASVIYVP D+I+E+ + I LIVCITEG+P LDM+ K + ++ Sbjct: 56 TVKEAVEQTGAEASVIYVPAPFCKDSILEAANSGIKLIVCITEGVPTLDMLDCKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHMPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG +L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGSALKEITG 289 >gi|15615032|ref|NP_243335.1| succinyl-CoA synthetase subunit alpha [Bacillus halodurans C-125] gi|10175089|dbj|BAB06188.1| succinyl-CoA synthetase (alpha subunit) [Bacillus halodurans C-125] Length = 302 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 231/299 (77%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+VQG+TG G FHT+QA+ Y T +VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVIVQGITGATGLFHTKQAVEY-GTNIVGGVTPGKGGTEVEG----IPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A E T ANASVIYVPP+ A DAI+E+++AE+ L +CITEGIPV+DMV+VK +E Sbjct: 56 TVSQAVEATGANASVIYVPPAFAADAIMEAVDAELDLAICITEGIPVMDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S G+GQSTA Sbjct: 116 KTRLVGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSTAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+LF D T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKLFNEDPDTYAVIMIGEIGGTAEEEAAEWIKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI ++ G+ +A +P+ +G +L+ +L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKTLESCGVKVAETPSVMGETLISVLKE 290 >gi|268318044|ref|YP_003291763.1| succinyl-CoA synthetase, alpha subunit [Rhodothermus marinus DSM 4252] gi|262335578|gb|ACY49375.1| succinyl-CoA synthetase, alpha subunit [Rhodothermus marinus DSM 4252] Length = 292 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 171/300 (57%), Positives = 224/300 (74%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD+NT+++VQG+TGK GTFHT+Q I Y T VV G+ P KG +++ PVF Sbjct: 1 MSILVDRNTRLVVQGITGKEGTFHTQQMIEY-GTNVVAGVTPGKGGQ----KHLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+ AN S+I+VPP+ A DAI+E+ +A I +IVCITEGIPV DM+ V +++ Sbjct: 56 TVAEAVEKEGANTSIIFVPPAFAADAILEAADAGIEVIVCITEGIPVRDMIPVYHYVKQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +LIGPNCPG++TP K+GIMPG IF++G +G++SRSGTLTYEAV Q ++ GLGQSTA Sbjct: 116 GVKLIGPNCPGVITPGQAKVGIMPGMIFKEGPIGVVSRSGTLTYEAVDQLTRLGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G F DVL LF D TE++V++GEIGG+AEEEAA F+K+ KP+ Sbjct: 176 VGIGGDPIIGLRFTDVLRLFQDDPETEAVVLIGEIGGTAEEEAAAFIKEHM----TKPVF 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPGR MGHAGA+I+GGKG AE+K A++ AG + +PA IG ++ E LG+L Sbjct: 232 AFIAGATAPPGRRMGHAGAIIAGGKGTAEEKFKALEAAGAVVIRNPALIGETVREHLGAL 291 >gi|30263838|ref|NP_846215.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis str. Ames] gi|42782927|ref|NP_980174.1| succinyl-CoA synthetase subunit alpha [Bacillus cereus ATCC 10987] gi|47529263|ref|YP_020612.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis str. 'Ames Ancestor'] gi|47570336|ref|ZP_00240981.1| succinyl-CoA synthetase alpha chain [Bacillus cereus G9241] gi|49186685|ref|YP_029937.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis str. Sterne] gi|49479151|ref|YP_037896.1| succinyl-CoA synthetase subunit alpha [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141653|ref|YP_085176.1| succinyl-CoA synthetase subunit alpha [Bacillus cereus E33L] gi|65321162|ref|ZP_00394121.1| COG0074: Succinyl-CoA synthetase, alpha subunit [Bacillus anthracis str. A2012] gi|165873310|ref|ZP_02217915.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0488] gi|167642032|ref|ZP_02400262.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0193] gi|170689659|ref|ZP_02880839.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0465] gi|170709357|ref|ZP_02899771.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0389] gi|177656001|ref|ZP_02937128.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0174] gi|196042355|ref|ZP_03109626.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus NVH0597-99] gi|206972725|ref|ZP_03233661.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus AH1134] gi|217961255|ref|YP_002339823.1| succinyl-CoA synthetase subunit alpha [Bacillus cereus AH187] gi|218232394|ref|YP_002368636.1| succinyl-CoA synthetase subunit alpha [Bacillus cereus B4264] gi|218898988|ref|YP_002447399.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus G9842] gi|218904963|ref|YP_002452797.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus AH820] gi|222097280|ref|YP_002531337.1| succinyl-CoA synthetase subunit alpha [Bacillus cereus Q1] gi|225865816|ref|YP_002751194.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus 03BB102] gi|227813257|ref|YP_002813266.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. CDC 684] gi|228902338|ref|ZP_04066495.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis IBL 4222] gi|228909660|ref|ZP_04073483.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis IBL 200] gi|228916472|ref|ZP_04080038.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228922589|ref|ZP_04085889.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228928883|ref|ZP_04091915.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935149|ref|ZP_04097976.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228940923|ref|ZP_04103482.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228947554|ref|ZP_04109844.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228954111|ref|ZP_04116140.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960051|ref|ZP_04121715.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar pakistani str. T13001] gi|228966780|ref|ZP_04127824.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar sotto str. T04001] gi|228973852|ref|ZP_04134428.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980442|ref|ZP_04140752.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis Bt407] gi|228986978|ref|ZP_04147104.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229031465|ref|ZP_04187465.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH1271] gi|229047521|ref|ZP_04193111.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH676] gi|229071333|ref|ZP_04204556.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus F65185] gi|229081090|ref|ZP_04213600.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock4-2] gi|229092877|ref|ZP_04224011.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock3-42] gi|229111306|ref|ZP_04240859.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock1-15] gi|229123349|ref|ZP_04252553.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus 95/8201] gi|229129111|ref|ZP_04258084.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BDRD-Cer4] gi|229140477|ref|ZP_04269032.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BDRD-ST26] gi|229146406|ref|ZP_04274777.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BDRD-ST24] gi|229157411|ref|ZP_04285489.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus ATCC 4342] gi|229174501|ref|ZP_04302033.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus MM3] gi|229180111|ref|ZP_04307455.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus 172560W] gi|229186075|ref|ZP_04313244.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BGSC 6E1] gi|229192004|ref|ZP_04318974.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus ATCC 10876] gi|229197945|ref|ZP_04324660.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus m1293] gi|229604162|ref|YP_002868072.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0248] gi|254683458|ref|ZP_05147318.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis str. CNEVA-9066] gi|254721979|ref|ZP_05183768.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis str. A1055] gi|254735873|ref|ZP_05193579.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis str. Western North America USA6153] gi|254739602|ref|ZP_05197296.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis str. Kruger B] gi|254751204|ref|ZP_05203243.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis str. Vollum] gi|254759313|ref|ZP_05211338.1| succinyl-CoA synthetase subunit alpha [Bacillus anthracis str. Australia 94] gi|296504330|ref|YP_003666030.1| succinyl-CoA synthetase subunit alpha [Bacillus thuringiensis BMB171] gi|30258482|gb|AAP27701.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. Ames] gi|42738854|gb|AAS42782.1| succinyl-CoA synthase, alpha subunit [Bacillus cereus ATCC 10987] gi|47504411|gb|AAT33087.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|47553001|gb|EAL11407.1| succinyl-CoA synthetase alpha chain [Bacillus cereus G9241] gi|49180612|gb|AAT55988.1| succinyl-CoA synthase, alpha subunit [Bacillus anthracis str. Sterne] gi|49330707|gb|AAT61353.1| succinyl-CoA synthase, alpha subunit [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51975122|gb|AAU16672.1| succinyl-CoA synthase, alpha subunit [Bacillus cereus E33L] gi|164710948|gb|EDR16520.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0488] gi|167510012|gb|EDR85428.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0193] gi|170125731|gb|EDS94644.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0389] gi|170666383|gb|EDT17166.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0465] gi|172079900|gb|EDT65008.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0174] gi|196026811|gb|EDX65447.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus NVH0597-99] gi|206732347|gb|EDZ49533.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus AH1134] gi|217063692|gb|ACJ77942.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus AH187] gi|218160351|gb|ACK60343.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus B4264] gi|218538957|gb|ACK91355.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus AH820] gi|218545726|gb|ACK98120.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus G9842] gi|221241338|gb|ACM14048.1| succinyl-CoA synthase, alpha subunit [Bacillus cereus Q1] gi|225788869|gb|ACO29086.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus cereus 03BB102] gi|227002998|gb|ACP12741.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. CDC 684] gi|228585524|gb|EEK43627.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus m1293] gi|228591555|gb|EEK49404.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus ATCC 10876] gi|228597251|gb|EEK54902.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BGSC 6E1] gi|228603320|gb|EEK60797.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus 172560W] gi|228609061|gb|EEK66351.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus MM3] gi|228626138|gb|EEK82887.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus ATCC 4342] gi|228637039|gb|EEK93498.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BDRD-ST24] gi|228643038|gb|EEK99314.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BDRD-ST26] gi|228654348|gb|EEL10213.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BDRD-Cer4] gi|228660125|gb|EEL15761.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus 95/8201] gi|228672082|gb|EEL27373.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock1-15] gi|228690499|gb|EEL44282.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock3-42] gi|228702134|gb|EEL54610.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock4-2] gi|228711787|gb|EEL63739.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus F65185] gi|228723768|gb|EEL75123.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH676] gi|228729754|gb|EEL80734.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH1271] gi|228772756|gb|EEM21196.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228779262|gb|EEM27519.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis Bt407] gi|228785877|gb|EEM33880.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792879|gb|EEM40437.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar sotto str. T04001] gi|228799567|gb|EEM46520.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar pakistani str. T13001] gi|228805677|gb|EEM52267.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228812074|gb|EEM58405.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228818759|gb|EEM64825.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228824514|gb|EEM70319.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830690|gb|EEM76295.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228837018|gb|EEM82359.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228843051|gb|EEM88133.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228849949|gb|EEM94780.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis IBL 200] gi|228857307|gb|EEN01810.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus thuringiensis IBL 4222] gi|229268570|gb|ACQ50207.1| succinate-CoA ligase (ADP-forming), alpha subunit [Bacillus anthracis str. A0248] gi|296325382|gb|ADH08310.1| succinyl-CoA synthetase subunit alpha [Bacillus thuringiensis BMB171] gi|324327732|gb|ADY22992.1| succinyl-CoA synthetase subunit alpha [Bacillus thuringiensis serovar finitimus YBT-020] gi|326941604|gb|AEA17500.1| succinyl-CoA synthetase subunit alpha [Bacillus thuringiensis serovar chinensis CT-43] Length = 300 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 180/299 (60%), Positives = 230/299 (76%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTDIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++AEI L+VCITEGIPVLDMV VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAEIDLVVCITEGIPVLDMVNVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 HTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPAGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVLKE 290 >gi|242238593|ref|YP_002986774.1| succinyl-CoA synthetase subunit alpha [Dickeya dadantii Ech703] gi|242130650|gb|ACS84952.1| succinyl-CoA synthetase, alpha subunit [Dickeya dadantii Ech703] Length = 290 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG G+FH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGSFHSEQALAY-GTQMVGGVTPGKGGTVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +LE++ Sbjct: 56 TVREAVEATGAIASVIYVPAPFCKDSILEAIDAGIQLIICITEGIPTLDMLTVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G+VGI+SRSGTLTYEAV QT+ GLGQS+ Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGNVGIVSRSGTLTYEAVKQTTDTGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGEAVKSVLNR 290 >gi|30021923|ref|NP_833554.1| succinyl-CoA synthetase subunit alpha [Bacillus cereus ATCC 14579] gi|29897479|gb|AAP10755.1| Succinyl-CoA synthetase alpha chain [Bacillus cereus ATCC 14579] Length = 300 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 181/299 (60%), Positives = 230/299 (76%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTDIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++AEI L+VCITEGIPVLDMV VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAEIDLVVCITEGIPVLDMVNVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGILSRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 HTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGILSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPAGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVLKE 290 >gi|123443155|ref|YP_001007129.1| succinyl-CoA synthetase subunit alpha [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332160921|ref|YP_004297498.1| succinyl-CoA synthetase subunit alpha [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122090116|emb|CAL12979.1| succinyl-CoA synthetase alpha chain [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318604826|emb|CBY26324.1| succinyl-CoA ligase [ADP-forming] alpha chain [Yersinia enterocolitica subsp. palearctica Y11] gi|325665151|gb|ADZ41795.1| succinyl-CoA synthetase subunit alpha [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862914|emb|CBX73049.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Yersinia enterocolitica W22703] Length = 292 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 177/299 (59%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTQHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +LE+S Sbjct: 56 TVREAVETTGATASVIYVPAPFCKDSILEAIDAGIKLIICITEGIPTLDMLVVKVKLEQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 DARMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDIGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEVIVMIGEIGGNAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ + S Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLAEIGNAVKAVYQS 290 >gi|254509020|ref|ZP_05121125.1| succinyl-CoA ligase, alpha subunit [Vibrio parahaemolyticus 16] gi|312884953|ref|ZP_07744643.1| succinyl-CoA synthetase subunit alpha [Vibrio caribbenthicus ATCC BAA-2122] gi|219548055|gb|EED25075.1| succinyl-CoA ligase, alpha subunit [Vibrio parahaemolyticus 16] gi|309367430|gb|EFP94992.1| succinyl-CoA synthetase subunit alpha [Vibrio caribbenthicus ATCC BAA-2122] Length = 290 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 180/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGLITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREITG 289 >gi|253687633|ref|YP_003016823.1| succinyl-CoA synthetase, alpha subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754211|gb|ACT12287.1| succinyl-CoA synthetase, alpha subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 290 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 221/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKNTKVICQGFTGSQGTFHSEQALAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLTVKVKLDQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQS+ Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKAILAR 290 >gi|209694428|ref|YP_002262356.1| succinyl-CoA synthetase subunit alpha [Aliivibrio salmonicida LFI1238] gi|208008379|emb|CAQ78534.1| succinyl-CoA synthetase alpha chain [Aliivibrio salmonicida LFI1238] Length = 290 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 177/298 (59%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIDY-GTKMVGGVSPGKGGQVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+A I LI+ ITEGIP LD++ VK RL+ Sbjct: 56 TVRDAVEATGATASVIYVPAPFCKDAILEAIDAGIKLIITITEGIPTLDLLDVKVRLDAE 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA+F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAEFIKHNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREITG 289 >gi|261822340|ref|YP_003260446.1| succinyl-CoA synthetase subunit alpha [Pectobacterium wasabiae WPP163] gi|261606353|gb|ACX88839.1| succinyl-CoA synthetase, alpha subunit [Pectobacterium wasabiae WPP163] Length = 290 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 175/297 (58%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKNTKVICQGFTGSQGTFHSEQALAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLTVKVKLDQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQS+ Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKAIL 288 >gi|229541103|ref|ZP_04430163.1| succinyl-CoA synthetase, alpha subunit [Bacillus coagulans 36D1] gi|229325523|gb|EEN91198.1| succinyl-CoA synthetase, alpha subunit [Bacillus coagulans 36D1] Length = 300 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 178/299 (59%), Positives = 225/299 (75%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI V+K+TKV+VQG+TGK FHT+Q + Y T++VGG P KG T G VPVF Sbjct: 1 MSIYVNKDTKVIVQGITGKTALFHTKQCLEY-GTKIVGGTSPGKGGTEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A SVIYVP A DAI+E+++AE+ L++CITE IPVLDMV+VK +E Sbjct: 56 TVKEAVEKTGATVSVIYVPAPFAADAIMEAVDAELDLVICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TPD CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++ G+GQ+ A Sbjct: 116 KTRLIGPNCPGIITPDECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTRAGIGQTGA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT FIDVL+ F D TE+++M+GEIGG+AEEEAA++++ KKP+V Sbjct: 176 IGIGGDPVNGTNFIDVLKEFNNDPETEAVIMIGEIGGTAEEEAAKWVQANM----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G TAPPG+ MGHAGA+ISGGKG A +KI M E GI +A +PA IG +LV +L Sbjct: 232 GFIGGVTAPPGKRMGHAGAIISGGKGTAAEKIRTMNECGIQVAETPAVIGETLVRVLKE 290 >gi|189499412|ref|YP_001958882.1| succinyl-CoA synthetase, alpha subunit [Chlorobium phaeobacteroides BS1] gi|189494853|gb|ACE03401.1| succinyl-CoA synthetase, alpha subunit [Chlorobium phaeobacteroides BS1] Length = 315 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 168/304 (55%), Positives = 227/304 (74%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T+++VQG+TG GTFHT Q + Y T VV G+ P KG +TG + + Sbjct: 16 MSVLVNKDTRLVVQGITGGEGTFHTSQILEY-GTNVVAGVTPGKGGLEYTGNDRDTFLRP 74 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV +A AN SVI+VP A DAI+E+ EA + +I+CITEGIPV DM++ Sbjct: 75 VPVFNTVKDAVVVAGANTSVIFVPAPFAADAIMEAAEAGLKVIICITEGIPVNDMMKAYR 134 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + L+GPNCPG++TP K+GIMPG I +KGS+G++SRSGTLTYEAV Q ++ GL Sbjct: 135 YVQEKGAVLVGPNCPGVITPGEAKVGIMPGFIHKKGSIGVVSRSGTLTYEAVHQLTEVGL 194 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDPV GT F+D ++LF D+ TE +VM+GEIGGSAEEEA++++K Sbjct: 195 GQSTCIGIGGDPVIGTRFLDAIKLFAKDDETEGLVMIGEIGGSAEEEASEYIKKH----F 250 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG AEDKI AM++AGI + +PA IG ++++ Sbjct: 251 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAEDKIRAMEKAGIHVVENPADIGDTMLK 310 Query: 296 LLGS 299 LG Sbjct: 311 ALGK 314 >gi|260901286|ref|ZP_05909681.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio parahaemolyticus AQ4037] gi|308109842|gb|EFO47382.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio parahaemolyticus AQ4037] Length = 290 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 180/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGQGLREVTG 289 >gi|195620062|gb|ACG31861.1| succinyl-CoA ligase alpha-chain 2 [Zea mays] Length = 320 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 183/297 (61%), Positives = 228/297 (76%), Gaps = 9/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDK+T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF +V Sbjct: 26 VFVDKSTRVICQGITGKNGTFHTEQAIEY-GTNMVGGVTPKKGGTEHLG----LPVFNSV 80 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 AEAK T ANASVIYVPP A AI+ES+EAE+ L+VCITEGIP DMV+VKA L +S Sbjct: 81 AEAKAETKANASVIYVPPPFAAAAIMESMEAELDLVVCITEGIPQHDMVKVKAALNRQSK 140 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 141 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCV 200 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D LE F+ D TE IV++GEIGG+AEE+AA F+++ + KP+V Sbjct: 201 GIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGTAEEDAATFIQESKTQ---KPVVA 257 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA+++GGKG A+DKI A++EAG+ + SPA+IG ++ E+ Sbjct: 258 FIAGLTAPPGRRMGHAGAIVAGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIFK 314 >gi|316931840|ref|YP_004106822.1| succinyl-CoA synthetase subunit alpha [Rhodopseudomonas palustris DX-1] gi|315599554|gb|ADU42089.1| succinyl-CoA synthetase, alpha subunit [Rhodopseudomonas palustris DX-1] Length = 294 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 216/299 (72%), Positives = 248/299 (82%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NT+V+ QG TGK GTFH+E AI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDSNTRVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+E+T A+ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVREAREKTGADASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRSLNGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ GSVGI+SRSGTLTYEAVFQTS EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVMTAGECKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTSAEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD+ TESI+M+GEIGGSAEE+AAQFL DEAKRGRKKP V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADDKTESIIMIGEIGGSAEEDAAQFLIDEAKRGRKKPTV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++L E L S Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAASKTAAMEAAGITVSPSPARLGKTLAEKLKS 294 >gi|260914170|ref|ZP_05920643.1| succinyl-CoA synthetase subunit alpha [Pasteurella dagmatis ATCC 43325] gi|260631803|gb|EEX49981.1| succinyl-CoA synthetase subunit alpha [Pasteurella dagmatis ATCC 43325] Length = 289 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 177/298 (59%), Positives = 225/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A A+VIYVP G DAI+E+I+A I L++CITEGIP LDM++VK RL ++ Sbjct: 56 TVRDAVETTGATATVIYVPAPGCKDAILEAIDAGIKLVICITEGIPTLDMLQVKQRLTQA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP+ CKIGIMPG+I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPEECKIGIMPGNIHKKGKIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSSFIDILKLFQDDPQTEAIVMIGEIGGSAEEEAASFIKEYV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S A IG +L LL Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEAAGVKTVRSLAEIGTALKSLLK 289 >gi|229098304|ref|ZP_04229251.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock3-29] gi|229104397|ref|ZP_04235066.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock3-28] gi|229117321|ref|ZP_04246699.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock1-3] gi|228666221|gb|EEL21685.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock1-3] gi|228679095|gb|EEL33303.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock3-28] gi|228685202|gb|EEL39133.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock3-29] Length = 300 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 179/299 (59%), Positives = 230/299 (76%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTDIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++A+I L+VCITEGIPVLDMV VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAKIDLVVCITEGIPVLDMVNVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 HTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPEGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVLKE 290 >gi|156973655|ref|YP_001444562.1| succinyl-CoA synthetase subunit alpha [Vibrio harveyi ATCC BAA-1116] gi|163802533|ref|ZP_02196425.1| succinyl-CoA synthetase subunit alpha [Vibrio sp. AND4] gi|269960712|ref|ZP_06175084.1| succinyl-CoA synthetase alpha subunit [Vibrio harveyi 1DA3] gi|156525249|gb|ABU70335.1| hypothetical protein VIBHAR_01358 [Vibrio harveyi ATCC BAA-1116] gi|159173616|gb|EDP58435.1| succinyl-CoA synthetase subunit alpha [Vibrio sp. AND4] gi|269834789|gb|EEZ88876.1| succinyl-CoA synthetase alpha subunit [Vibrio harveyi 1DA3] Length = 290 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAYIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLAEIGKGLREVTG 289 >gi|89073523|ref|ZP_01160046.1| succinyl-CoA synthetase alpha subunit [Photobacterium sp. SKA34] gi|89050787|gb|EAR56268.1| succinyl-CoA synthetase alpha subunit [Photobacterium sp. SKA34] Length = 290 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 181/296 (61%), Positives = 225/296 (76%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIDY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP LDM+ VK RL+++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTLDMLDVKVRLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKAGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D ATE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPATEAIVMIGEIGGTAEEEAASYIKE----SVTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++EAG+ S A IG++L E+ Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEEAGVKTVKSLADIGKALREV 287 >gi|271499754|ref|YP_003332779.1| succinyl-CoA synthetase subunit alpha [Dickeya dadantii Ech586] gi|270343309|gb|ACZ76074.1| succinyl-CoA synthetase, alpha subunit [Dickeya dadantii Ech586] Length = 290 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 178/297 (59%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG G+FH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGSFHSEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK +LE+S Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIQLIICITEGIPTLDMLTVKVKLEQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP +CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGACKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKAVL 288 >gi|23502775|ref|NP_698902.1| succinyl-CoA synthetase subunit alpha [Brucella suis 1330] gi|161619843|ref|YP_001593730.1| succinyl-CoA synthetase subunit alpha [Brucella canis ATCC 23365] gi|163843948|ref|YP_001628352.1| succinyl-CoA synthetase subunit alpha [Brucella suis ATCC 23445] gi|254700568|ref|ZP_05162396.1| succinyl-CoA synthetase subunit alpha [Brucella suis bv. 5 str. 513] gi|254704938|ref|ZP_05166766.1| succinyl-CoA synthetase subunit alpha [Brucella suis bv. 3 str. 686] gi|254707548|ref|ZP_05169376.1| succinyl-CoA synthetase subunit alpha [Brucella pinnipedialis M163/99/10] gi|254708915|ref|ZP_05170726.1| succinyl-CoA synthetase subunit alpha [Brucella pinnipedialis B2/94] gi|254717986|ref|ZP_05179797.1| succinyl-CoA synthetase subunit alpha [Brucella sp. 83/13] gi|256030441|ref|ZP_05444055.1| succinyl-CoA synthetase subunit alpha [Brucella pinnipedialis M292/94/1] gi|256059901|ref|ZP_05450087.1| succinyl-CoA synthetase subunit alpha [Brucella neotomae 5K33] gi|256158425|ref|ZP_05456323.1| succinyl-CoA synthetase subunit alpha [Brucella ceti M490/95/1] gi|256253845|ref|ZP_05459381.1| succinyl-CoA synthetase subunit alpha [Brucella ceti B1/94] gi|256370327|ref|YP_003107838.1| succinyl-CoA synthetase alpha subunit [Brucella microti CCM 4915] gi|260567586|ref|ZP_05838056.1| succinyl-CoA ligase [Brucella suis bv. 4 str. 40] gi|261220981|ref|ZP_05935262.1| succinyl-CoA synthetase subunit alpha [Brucella ceti B1/94] gi|261315031|ref|ZP_05954228.1| succinyl-CoA synthetase subunit alpha [Brucella pinnipedialis M163/99/10] gi|261316412|ref|ZP_05955609.1| succinyl-CoA synthetase subunit alpha [Brucella pinnipedialis B2/94] gi|261323871|ref|ZP_05963068.1| succinyl-CoA synthetase subunit alpha [Brucella neotomae 5K33] gi|261751074|ref|ZP_05994783.1| succinyl-CoA synthetase subunit alpha [Brucella suis bv. 5 str. 513] gi|261755636|ref|ZP_05999345.1| succinyl-CoA synthetase subunit alpha [Brucella suis bv. 3 str. 686] gi|265982930|ref|ZP_06095665.1| succinyl-CoA synthetase subunit alpha [Brucella sp. 83/13] gi|265987483|ref|ZP_06100040.1| succinyl-CoA synthetase subunit alpha [Brucella pinnipedialis M292/94/1] gi|265996940|ref|ZP_06109497.1| succinyl-CoA synthetase subunit alpha [Brucella ceti M490/95/1] gi|294851168|ref|ZP_06791841.1| succinyl-CoA ligase subunit alpha [Brucella sp. NVSL 07-0026] gi|306839764|ref|ZP_07472565.1| succinyl-CoA synthetase, alpha subunit [Brucella sp. NF 2653] gi|306842925|ref|ZP_07475561.1| succinyl-CoA synthetase, alpha subunit [Brucella sp. BO2] gi|23348795|gb|AAN30817.1| succinyl-CoA synthetase, alpha subunit [Brucella suis 1330] gi|161336654|gb|ABX62959.1| succinyl-CoA synthetase, alpha subunit [Brucella canis ATCC 23365] gi|163674671|gb|ABY38782.1| succinyl-CoA synthetase, alpha subunit [Brucella suis ATCC 23445] gi|256000490|gb|ACU48889.1| succinyl-CoA synthetase alpha subunit [Brucella microti CCM 4915] gi|260157104|gb|EEW92184.1| succinyl-CoA ligase [Brucella suis bv. 4 str. 40] gi|260919565|gb|EEX86218.1| succinyl-CoA synthetase subunit alpha [Brucella ceti B1/94] gi|261295635|gb|EEX99131.1| succinyl-CoA synthetase subunit alpha [Brucella pinnipedialis B2/94] gi|261299851|gb|EEY03348.1| succinyl-CoA synthetase subunit alpha [Brucella neotomae 5K33] gi|261304057|gb|EEY07554.1| succinyl-CoA synthetase subunit alpha [Brucella pinnipedialis M163/99/10] gi|261740827|gb|EEY28753.1| succinyl-CoA synthetase subunit alpha [Brucella suis bv. 5 str. 513] gi|261745389|gb|EEY33315.1| succinyl-CoA synthetase subunit alpha [Brucella suis bv. 3 str. 686] gi|262551408|gb|EEZ07398.1| succinyl-CoA synthetase subunit alpha [Brucella ceti M490/95/1] gi|264659680|gb|EEZ29941.1| succinyl-CoA synthetase subunit alpha [Brucella pinnipedialis M292/94/1] gi|264661522|gb|EEZ31783.1| succinyl-CoA synthetase subunit alpha [Brucella sp. 83/13] gi|294819757|gb|EFG36756.1| succinyl-CoA ligase subunit alpha [Brucella sp. NVSL 07-0026] gi|306286948|gb|EFM58468.1| succinyl-CoA synthetase, alpha subunit [Brucella sp. BO2] gi|306405119|gb|EFM61397.1| succinyl-CoA synthetase, alpha subunit [Brucella sp. NF 2653] Length = 300 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 236/299 (78%), Positives = 270/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGSKGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KERT A+ASVIYVPP+GA DAIIE+IEAEI IVCITEGIPV+DMVRVK RLE+ Sbjct: 61 ATVAEGKERTGADASVIYVPPAGAADAIIEAIEAEIGFIVCITEGIPVMDMVRVKERLER 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G++LVE+L Sbjct: 241 VGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVLK 299 >gi|15241592|ref|NP_196447.1| succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative [Arabidopsis thaliana] gi|57014135|sp|P68209|SUCA1_ARATH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha-1; Short=SCS-alpha-1; Flags: Precursor gi|3660467|emb|CAA05023.1| succinyl-CoA-ligase alpha subunit [Arabidopsis thaliana] gi|10178272|emb|CAC08330.1| succinyl-CoA-ligase alpha subunit [Arabidopsis thaliana] gi|18252215|gb|AAL61940.1| succinyl-CoA-ligase alpha subunit [Arabidopsis thaliana] gi|21387057|gb|AAM47932.1| succinyl-CoA-ligase alpha subunit [Arabidopsis thaliana] gi|21536557|gb|AAM60889.1| succinyl-CoA-ligase alpha subunit [Arabidopsis thaliana] gi|332003896|gb|AED91279.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-1 [Arabidopsis thaliana] Length = 347 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 185/299 (61%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+VL QG+TGK GTFHTEQAI Y T++V G+ PKKG T G +PVF + Sbjct: 51 AVFVDKNTRVLCQGITGKNGTFHTEQAIEY-GTKMVAGVTPKKGGTEHLG----LPVFNS 105 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEAK T ANASVIYVP A AI+E IEAE+ LIVCITEGIP DMVRVK L +S Sbjct: 106 VAEAKADTKANASVIYVPAPFAAAAIMEGIEAELDLIVCITEGIPQHDMVRVKHALNSQS 165 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 166 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTC 225 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F D TE IV++GEIGG+AEE+AA +K G +KP+V Sbjct: 226 VGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIKA---SGTEKPVV 282 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA++SGGKG A+DKI ++ +AG+ + SPA+IG ++ EL Sbjct: 283 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKSLNDAGVKVVESPAKIGSAMYELFQE 341 >gi|163851072|ref|YP_001639115.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium extorquens PA1] gi|163662677|gb|ABY30044.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium extorquens PA1] Length = 295 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 222/299 (74%), Positives = 255/299 (85%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+NTKV+ QG TGK GTFH+EQAI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDQNTKVICQGFTGKNGTFHSEQAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E T A+ASV+YVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK LE S Sbjct: 56 TVAEAREATGADASVVYVPPPGAADAICEAIQAEIPLIVCITEGIPVLDMVRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T KIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+ EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVVTAGQSKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTVEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFI +LELFLAD TESIVM+GEIGGSAEEEAAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIAMLELFLADPKTESIVMIGEIGGSAEEEAAQFLADEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPAR+G +LV++L S Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPARLGSTLVDVLKS 294 >gi|330445472|ref|ZP_08309124.1| succinyl-CoA synthetase, alpha subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489663|dbj|GAA03621.1| succinyl-CoA synthetase, alpha subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 290 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 182/296 (61%), Positives = 225/296 (76%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP LDM+ VK RL+++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTLDMLDVKVRLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKAGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D ATE+IVM+GEIGG+AEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPATEAIVMIGEIGGTAEEEAAAYIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++EAG+ S A IG++L E+ Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEEAGVKTVKSLADIGKALREV 287 >gi|260597127|ref|YP_003209698.1| succinyl-CoA synthetase subunit alpha [Cronobacter turicensis z3032] gi|260216304|emb|CBA29278.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Cronobacter turicensis z3032] Length = 289 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 176/298 (59%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVDATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHQPGRVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDALKTILK 289 >gi|167644202|ref|YP_001681865.1| succinyl-CoA synthetase subunit alpha [Caulobacter sp. K31] gi|167346632|gb|ABZ69367.1| succinyl-CoA synthetase, alpha subunit [Caulobacter sp. K31] Length = 294 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 211/298 (70%), Positives = 254/298 (85%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ TKV+ QG+TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSILIGSQTKVICQGITGAQGTFHSEQAIAY-GTKMVGGVTPGKGGQTHIG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+E T A+A+ IYVPP A D+I+E+I+AEIPLI+CITEGIPVLDMV+VK L+ S Sbjct: 56 TVGEAREATGADATAIYVPPPFAADSILEAIDAEIPLIICITEGIPVLDMVKVKKALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP+ CKIGIMPGSIF +GSVG++SRSGTLTYEAVFQT+ GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPNQCKIGIMPGSIFSQGSVGVVSRSGTLTYEAVFQTTNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFID+LELFLAD+AT+SIVM+GEIGGSAEE+AAQF+ DEAKRGR KP+V Sbjct: 176 VGIGGDPVKGTEFIDILELFLADDATKSIVMIGEIGGSAEEDAAQFIADEAKRGRSKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPA++G +L+E+L Sbjct: 236 GFIAGRTAPPGRHMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPAKLGETLLEVLK 293 >gi|212635733|ref|YP_002312258.1| succinyl-CoA ligase subunit alpha [Shewanella piezotolerans WP3] gi|212557217|gb|ACJ29671.1| Succinyl-CoA ligase, alpha subunit [Shewanella piezotolerans WP3] Length = 290 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 175/298 (58%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A A+VIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVAETGATATVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 NVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAEYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKALRTKTG 289 >gi|301169938|emb|CBW29542.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Haemophilus influenzae 10810] Length = 293 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 184/299 (61%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP S DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPIPGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|294141503|ref|YP_003557481.1| succinyl-CoA synthase subunit alpha [Shewanella violacea DSS12] gi|293327972|dbj|BAJ02703.1| succinyl-CoA synthase, alpha subunit [Shewanella violacea DSS12] Length = 290 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 177/294 (60%), Positives = 219/294 (74%), Gaps = 9/294 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIDY-GTQMVGGVSPGKGGKVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A ASVIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKEAVAQTGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLELF D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLELFQNDPQTEAIVMIGEIGGTAEEEAAEYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKALR 285 >gi|209885675|ref|YP_002289532.1| succinyl-CoA ligase [Oligotropha carboxidovorans OM5] gi|209873871|gb|ACI93667.1| succinyl-CoA ligase [Oligotropha carboxidovorans OM5] Length = 302 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 207/298 (69%), Positives = 249/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+++DKNTKV+ QG TGK GTFH+E AI Y T++VGG P KG G +PVF Sbjct: 1 MSVMIDKNTKVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGQTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V+EA+ +T A+ASV+YVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 SVSEARAKTGADASVVYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPG++T CKIGIMP +IF+ G+VGI+SRSGTLTYEAVFQT+Q G GQ+TA Sbjct: 116 KSRLLGPNCPGVVTAGECKIGIMPTNIFKPGNVGIVSRSGTLTYEAVFQTTQAGFGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD+ TESI+M+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADDKTESIIMIGEIGGSAEEDAAQFLKDEAKRGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AM+ AGI ++ SPAR+G +L +LL Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIAAMEAAGIAVSASPARLGSTLADLLK 293 >gi|308050194|ref|YP_003913760.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ferrimonas balearica DSM 9799] gi|307632384|gb|ADN76686.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ferrimonas balearica DSM 9799] Length = 290 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 176/298 (59%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGSTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP DAI+E+I+A I LIV ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTLDMLDVKVKLDQA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHQPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGTAEEEAAAYIKQHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+I+GGKG A DK A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIIAGGKGTAADKFAALEDAGVKTVRSLADIGKALREVTG 289 >gi|332992991|gb|AEF03046.1| Succinyl-CoA synthetase subunit alpha [Alteromonas sp. SN2] Length = 290 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP + D+I+E+ +A I LIVCITEGIP LDM+ VK + Sbjct: 56 TVREAVEATGATATVIYVPAAFCKDSIVEAADAGIELIVCITEGIPTLDMLYVKEYVNAK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQS+ Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA+F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILQLFQDDPQTEAIVMIGEIGGTAEEEAAEFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A+++AG+ S A IG++L E G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTADEKFKALEDAGVKTVRSLAEIGKALRETTG 289 >gi|641971|gb|AAA61788.1| succinyl-CoA synthetase alpha chain [Coxiella burnetii] Length = 294 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 176/299 (58%), Positives = 225/299 (75%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK T+VL QG TGK GTFH+EQAI Y TQ+VGG+ P KG G +P+F Sbjct: 1 MSILIDKETRVLCQGFTGKQGTFHSEQAIEY-GTQMVGGVTPGKGGQSHLG----LPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E T+A+A++I+VP D+IIE+++A + L+VCITEGIPVLDM+ VKA L + Sbjct: 56 SVHEAVEETSADATMIFVPAPFCKDSIIEAVDAGVRLVVCITEGIPVLDMLEVKAYLRQH 115 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPNCPG++TP CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q G GQST Sbjct: 116 PDVRMIGPNCPGVITPGECKIGIMPGHIHQRGKVGIVSRSGTLTYEAVNQTTQMGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT FIDVLE+F D T++IVMVGEIGG+AEEEAA+F++ KKP+ Sbjct: 176 CVGIGGDPIPGTSFIDVLEMFEKDSQTQAIVMVGEIGGTAEEEAAEFIQSNV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + ++AG TAPPG+ MGHAGA+I+GGKG A DK A++ AG+ + SPA IG+ + E G Sbjct: 232 ISYIAGVTAPPGKRMGHAGAIIAGGKGTAADKYAALEAAGVFVVKSPAEIGKGVREATG 290 >gi|192288618|ref|YP_001989223.1| succinyl-CoA synthetase, alpha subunit [Rhodopseudomonas palustris TIE-1] gi|192282367|gb|ACE98747.1| succinyl-CoA synthetase, alpha subunit [Rhodopseudomonas palustris TIE-1] Length = 294 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 215/299 (71%), Positives = 249/299 (83%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NT+V+ QG TGK GTFH+E AI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDSNTRVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+++T A+ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVREARDKTGADASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRSLNGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ GSVGI+SRSGTLTYEAVFQTS EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVMTAGECKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTSAEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD+ TESI+M+GEIGGSAEE+AAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADDKTESIIMIGEIGGSAEEDAAQFLIDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++L E L S Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAASKTAAMEAAGITVSPSPARLGKTLAEKLKS 294 >gi|148978241|ref|ZP_01814759.1| succinyl-CoA synthetase subunit alpha [Vibrionales bacterium SWAT-3] gi|145962542|gb|EDK27819.1| succinyl-CoA synthetase subunit alpha [Vibrionales bacterium SWAT-3] Length = 290 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 180/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGLITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREITG 289 >gi|94498998|ref|ZP_01305536.1| Succinyl-CoA synthetase, alpha subunit [Oceanobacter sp. RED65] gi|94428630|gb|EAT13602.1| Succinyl-CoA synthetase, alpha subunit [Oceanobacter sp. RED65] Length = 290 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNTKV+ QG TG GTFH+EQAI Y T +VGG+ P KG T G +PVF Sbjct: 1 MSILLEKNTKVICQGFTGSQGTFHSEQAIEY-GTNMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A ASVIYVP D+I+E+ A I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKEAVEQTGAEASVIYVPAPFCKDSILEAANAGIQLIVCITEGIPTLDMMYCKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP KIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVVLIGPNCPGVITPGQSKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDFGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+ F D TE+IVM+GEIGG+AEEEAA+++K+ KP+V Sbjct: 176 VGIGGDPIPGSSFIDILKRFEEDPQTEAIVMIGEIGGTAEEEAAEYIKENVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+I+GGKG A++K A++ AG+ S A IG++L E G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIIAGGKGTADEKFAALEAAGVQTVKSLADIGKALKEKTG 289 >gi|145637049|ref|ZP_01792712.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae PittHH] gi|260582126|ref|ZP_05849920.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae NT127] gi|145269703|gb|EDK09643.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae PittHH] gi|260094758|gb|EEW78652.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae NT127] Length = 293 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 184/299 (61%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP S DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|22126940|ref|NP_670363.1| succinyl-CoA synthetase subunit alpha [Yersinia pestis KIM 10] gi|45440874|ref|NP_992413.1| succinyl-CoA synthetase subunit alpha [Yersinia pestis biovar Microtus str. 91001] gi|51595494|ref|YP_069685.1| succinyl-CoA synthetase subunit alpha [Yersinia pseudotuberculosis IP 32953] gi|108806591|ref|YP_650507.1| succinyl-CoA synthetase subunit alpha [Yersinia pestis Antiqua] gi|108813042|ref|YP_648809.1| succinyl-CoA synthetase subunit alpha [Yersinia pestis Nepal516] gi|145599846|ref|YP_001163922.1| succinyl-CoA synthetase subunit alpha [Yersinia pestis Pestoides F] gi|149366884|ref|ZP_01888918.1| succinyl-CoA synthetase alpha chain [Yersinia pestis CA88-4125] gi|153950506|ref|YP_001401841.1| succinyl-CoA synthetase subunit alpha [Yersinia pseudotuberculosis IP 31758] gi|162420505|ref|YP_001605913.1| succinyl-CoA synthetase subunit alpha [Yersinia pestis Angola] gi|165924347|ref|ZP_02220179.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165938400|ref|ZP_02226958.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166011613|ref|ZP_02232511.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166211799|ref|ZP_02237834.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167399740|ref|ZP_02305258.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419457|ref|ZP_02311210.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423865|ref|ZP_02315618.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468937|ref|ZP_02333641.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis FV-1] gi|170025187|ref|YP_001721692.1| succinyl-CoA synthetase subunit alpha [Yersinia pseudotuberculosis YPIII] gi|186894547|ref|YP_001871659.1| succinyl-CoA synthetase subunit alpha [Yersinia pseudotuberculosis PB1/+] gi|218928284|ref|YP_002346159.1| succinyl-CoA synthetase subunit alpha [Yersinia pestis CO92] gi|229841052|ref|ZP_04461211.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843156|ref|ZP_04463302.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229893993|ref|ZP_04509179.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Yersinia pestis Pestoides A] gi|229903483|ref|ZP_04518596.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Yersinia pestis Nepal516] gi|270487264|ref|ZP_06204338.1| succinyl-CoA synthetase subunit alpha [Yersinia pestis KIM D27] gi|294503123|ref|YP_003567185.1| succinyl-CoA synthetase alpha subunit [Yersinia pestis Z176003] gi|21959980|gb|AAM86614.1|AE013907_8 succinyl-CoA synthetase, alpha subunit [Yersinia pestis KIM 10] gi|45435732|gb|AAS61290.1| succinyl-CoA synthetase alpha chain [Yersinia pestis biovar Microtus str. 91001] gi|51588776|emb|CAH20390.1| succinyl-CoA synthetase alpha chain [Yersinia pseudotuberculosis IP 32953] gi|108776690|gb|ABG19209.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Yersinia pestis Nepal516] gi|108778504|gb|ABG12562.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Yersinia pestis Antiqua] gi|115346895|emb|CAL19782.1| succinyl-CoA synthetase alpha chain [Yersinia pestis CO92] gi|145211542|gb|ABP40949.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Yersinia pestis Pestoides F] gi|149291258|gb|EDM41333.1| succinyl-CoA synthetase alpha chain [Yersinia pestis CA88-4125] gi|152962001|gb|ABS49462.1| succinyl-CoA synthetase, alpha subunit [Yersinia pseudotuberculosis IP 31758] gi|162353320|gb|ABX87268.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis Angola] gi|165913778|gb|EDR32397.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165923407|gb|EDR40539.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165989561|gb|EDR41862.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166207570|gb|EDR52050.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166962198|gb|EDR58219.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050448|gb|EDR61856.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056714|gb|EDR66477.1| succinyl-CoA synthetase, alpha subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751721|gb|ACA69239.1| succinyl-CoA synthetase, alpha subunit [Yersinia pseudotuberculosis YPIII] gi|186697573|gb|ACC88202.1| succinyl-CoA synthetase, alpha subunit [Yersinia pseudotuberculosis PB1/+] gi|229679253|gb|EEO75356.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Yersinia pestis Nepal516] gi|229689503|gb|EEO81564.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229697418|gb|EEO87465.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229703878|gb|EEO90891.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Yersinia pestis Pestoides A] gi|262361159|gb|ACY57880.1| succinyl-CoA synthetase alpha subunit [Yersinia pestis D106004] gi|262365286|gb|ACY61843.1| succinyl-CoA synthetase alpha subunit [Yersinia pestis D182038] gi|270335768|gb|EFA46545.1| succinyl-CoA synthetase subunit alpha [Yersinia pestis KIM D27] gi|294353582|gb|ADE63923.1| succinyl-CoA synthetase alpha subunit [Yersinia pestis Z176003] gi|320014255|gb|ADV97826.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 290 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 177/297 (59%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTQHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ VK RLE+S Sbjct: 56 TVREAVETTGATASVIYVPAPFCKDSILEAIDAGIKLIICITEGIPTLDMLVVKVRLEQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQS+ Sbjct: 116 DARMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDIGFGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEVIVMIGEIGGNAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A+DK A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLAEIGNAVKAVL 288 >gi|328473392|gb|EGF44240.1| succinyl-CoA synthetase subunit alpha [Vibrio parahaemolyticus 10329] Length = 290 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 180/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQKDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGQGLREVTG 289 >gi|229086388|ref|ZP_04218564.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock3-44] gi|228696904|gb|EEL49713.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus Rock3-44] Length = 300 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 180/299 (60%), Positives = 231/299 (77%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTEIEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++AEI L+VCITEGIPVLDMV+VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAEIDLVVCITEGIPVLDMVKVKKYMTGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 QTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPAGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVLKE 290 >gi|261252267|ref|ZP_05944840.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio orientalis CIP 102891] gi|260935658|gb|EEX91647.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio orientalis CIP 102891] Length = 290 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLGQ----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAYIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGKGLREVTG 289 >gi|49476304|ref|YP_034345.1| succinyl-CoA synthetase subunit alpha [Bartonella henselae str. Houston-1] gi|49239112|emb|CAF28416.1| Succinyl-CoA synthetase alpha chain [Bartonella henselae str. Houston-1] Length = 300 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 231/299 (77%), Positives = 271/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGG++PKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYHGTQMVGGVNPKKGGETWEGSKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE KE+T A+ASVIYVPP+GA AIIE++EAEI LI+CITEGIPV+DMV+VKARLEK Sbjct: 61 ASVAEGKEKTGADASVIYVPPAGAAAAIIEAVEAEIRLIICITEGIPVMDMVKVKARLEK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGILTP+ CKIGIMPGSIFRKGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLIGPNCPGILTPNECKIGIMPGSIFRKGSVGVVSRSGTLTYEAVFQTSHEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEEEAAQFL+DEAK+GRKKP+ Sbjct: 181 AIGIGGDPVKGTEFIDVLEMFLADDETQSIVMIGEIGGSAEEEAAQFLQDEAKKGRKKPV 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSP++IG++L+ +L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMESAGIKVSPSPSQIGKTLMSVLK 299 >gi|301156159|emb|CBW15630.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Haemophilus parainfluenzae T3T1] Length = 289 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 178/298 (59%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K TKV+ QG TG GTFH EQA+ Y T++VGGI P KG T G +PVF Sbjct: 1 MAILINKETKVICQGFTGAQGTFHCEQALAY-GTKLVGGISPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A A++IYVP DAI+E+I+A I L+VCITEGIP LDM+ VK +L ++ Sbjct: 56 TVREAVQATGATATMIYVPAPFCKDAILEAIDAGIQLVVCITEGIPTLDMLLVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMPG+I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPGNIHKKGRVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+ F D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKRFQEDPETEAIVMIGEIGGSAEEEAAAFIKSHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG AEDKI A++ AG+ S A IG +L ELL Sbjct: 232 AYIAGVTAPKGKRMGHAGAIISGGKGTAEDKIAALEAAGVKTVRSLAEIGSALRELLK 289 >gi|254560766|ref|YP_003067861.1| succinyl-CoA synthetase subunit alpha [Methylobacterium extorquens DM4] gi|254268044|emb|CAX23915.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium extorquens DM4] Length = 295 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 221/299 (73%), Positives = 255/299 (85%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+NTKV+ QG TGK GTFH+EQAI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDQNTKVICQGFTGKNGTFHSEQAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA++ T A+ASV+YVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK LE S Sbjct: 56 TVAEARDATGADASVVYVPPPGAADAICEAIQAEIPLIVCITEGIPVLDMVRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T KIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+ EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVVTAGQSKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTVEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFI +LELFLAD TESIVM+GEIGGSAEEEAAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIAMLELFLADPKTESIVMIGEIGGSAEEEAAQFLADEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPAR+G +LV++L S Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPARLGSTLVDVLKS 294 >gi|315633949|ref|ZP_07889238.1| succinyl-CoA synthetase subunit alpha [Aggregatibacter segnis ATCC 33393] gi|315477199|gb|EFU67942.1| succinyl-CoA synthetase subunit alpha [Aggregatibacter segnis ATCC 33393] Length = 290 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 176/299 (58%), Positives = 225/299 (75%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQALAY-GTKLVGGVSPNKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A A+VIYVP G DAI+E+I+A I LI+CITEGIP LDM+ VK RL ++ Sbjct: 56 TVRDAVEATGATATVIYVPAPGCKDAILEAIDAGIKLIICITEGIPTLDMLVVKQRLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP+ CKIGIMPG+I +KG +GI+SRSGTLTYEAV QT+ EGLGQST Sbjct: 116 GVRMIGPNCPGVITPEECKIGIMPGNIHKKGKIGIVSRSGTLTYEAVKQTTDEGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ F+D+L+LF D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFVDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAFIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEAAGVKTVRSLAEIGSALRAMLNK 290 >gi|145639283|ref|ZP_01794889.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae PittII] gi|145271586|gb|EDK11497.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae PittII] Length = 293 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 182/299 (60%), Positives = 221/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VG + P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGVVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP S DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEE A F+KD KP+V Sbjct: 176 VGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEVAIFIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|16273117|ref|NP_439353.1| succinyl-CoA synthetase subunit alpha [Haemophilus influenzae Rd KW20] gi|260581103|ref|ZP_05848924.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae RdAW] gi|1174474|sp|P45102|SUCD_HAEIN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|1574126|gb|AAC22851.1| succinyl-CoA synthetase, alpha subunit (sucD) [Haemophilus influenzae Rd KW20] gi|260092232|gb|EEW76174.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae RdAW] Length = 293 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 183/299 (61%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A+VIYVP S DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGVTATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPIPGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|205373360|ref|ZP_03226164.1| succinyl-CoA synthetase subunit alpha [Bacillus coahuilensis m4-4] Length = 300 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 169/299 (56%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+TKV+VQG+TG FHT+Q + Y TQ+V G+ P K G VPVF Sbjct: 1 MSVFINKDTKVIVQGITGSTALFHTKQMLEY-GTQIVAGVTPGKAGQEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A T A SV+YVP A DAI+E+++AE+ L++CITE IPVLDMV+VK + Sbjct: 56 TVSDAVTETGATVSVVYVPAPFAADAILEAVDAELDLVICITEHIPVLDMVKVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+TPD CKIGIMPG I KG VG++SRSGTLTYEAV Q SQ G+GQSTA Sbjct: 116 KTRLVGPNCPGIITPDECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLSQAGVGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLQAFNEDPETYAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI M E GI +A +P+ +G +L+ +L Sbjct: 232 GFIGGRTAPPGKRMGHAGAIISGGKGTADEKIRIMNECGIKVAETPSVMGETLISVLKE 290 >gi|119774567|ref|YP_927307.1| succinyl-CoA synthetase alpha chain [Shewanella amazonensis SB2B] gi|119767067|gb|ABL99637.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella amazonensis SB2B] Length = 290 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 178/298 (59%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVAATGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L E G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKALREKTG 289 >gi|85713705|ref|ZP_01044695.1| succinyl-CoA ligase, alpha subunit [Nitrobacter sp. Nb-311A] gi|85699609|gb|EAQ37476.1| succinyl-CoA ligase, alpha subunit [Nitrobacter sp. Nb-311A] Length = 294 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 215/299 (71%), Positives = 250/299 (83%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNT+V+ QG TGK GTFH+E AI Y T++VGG P KG +++PVF Sbjct: 1 MSILIDKNTRVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGQTH----LDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+E T A+ASV+YVPP+GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVREAREATGADASVVYVPPAGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRSLSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ G+VGI+SRSGTLTYEAVFQTSQEGLGQ+TA Sbjct: 116 KSRLIGPNCPGVVTAGECKIGIMPANIFKTGNVGIVSRSGTLTYEAVFQTSQEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD T +IVM+GEIGGSAEE+AAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADPKTSAIVMIGEIGGSAEEDAAQFLIDEAKRGRKKPVV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++LVE L S Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAVSKTAAMEAAGIVVSPSPARLGKTLVEKLKS 294 >gi|297806865|ref|XP_002871316.1| hypothetical protein ARALYDRAFT_487662 [Arabidopsis lyrata subsp. lyrata] gi|297317153|gb|EFH47575.1| hypothetical protein ARALYDRAFT_487662 [Arabidopsis lyrata subsp. lyrata] Length = 347 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 185/299 (61%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+VL QG+TGK GTFHTEQAI Y T++V G+ PKKG T G +PVF + Sbjct: 51 AVFVDKNTRVLCQGITGKNGTFHTEQAIEY-GTKMVAGVTPKKGGTEHLG----LPVFNS 105 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEAK T ANASVIYVP A AI+E IEAE+ LIVCITEGIP DMVRVK L +S Sbjct: 106 VAEAKADTKANASVIYVPAPFAAAAIMEGIEAELDLIVCITEGIPQHDMVRVKHALNSQS 165 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 166 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTC 225 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F D TE IV++GEIGG+AEE+AA +K G +KP+V Sbjct: 226 VGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIKA---SGTEKPVV 282 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA++SGGKG A+DKI ++ +AG+ + SPA+IG ++ EL Sbjct: 283 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKSLNDAGVKVVESPAKIGAAMYELFQE 341 >gi|119472924|ref|ZP_01614797.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding protein [Alteromonadales bacterium TW-7] gi|119444642|gb|EAW25951.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding protein [Alteromonadales bacterium TW-7] Length = 290 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQALEY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A ASVIYVP DAI+E+I+A I LIVCITEGIP LDMV VK +L+++ Sbjct: 56 TVRDAVQETGATASVIYVPAPFCKDAILEAIDAGIELIVCITEGIPTLDMVDVKVKLDQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP KIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GTRMIGPNCPGVITPGETKIGIMPGHIHKLGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFEKDPQTEAIVMIGEIGGTAEEEAAEYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG++L E G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTADEKFAALEAAGVQTVRSLADIGKALKEKTG 289 >gi|240949390|ref|ZP_04753731.1| hypothetical protein AM305_10616 [Actinobacillus minor NM305] gi|240296139|gb|EER46795.1| hypothetical protein AM305_10616 [Actinobacillus minor NM305] Length = 290 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 176/299 (58%), Positives = 224/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGAQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP G DAI+E+I+A I LIVCITEGIP LDM+ +K +L ++ Sbjct: 56 TVREAVETTQATATVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMLEIKQKLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP+ CKIGIMP +I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPEECKIGIMPANIHKKGKIGIISRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L LF D TE+IVM+GEIGGSAEEEAA+F++ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILRLFEQDPETEAIVMIGEIGGSAEEEAAEFIRKHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S A IG +L +++ S Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEAAGVTTVRSLADIGSALRKVMKS 290 >gi|297808323|ref|XP_002872045.1| hypothetical protein ARALYDRAFT_489184 [Arabidopsis lyrata subsp. lyrata] gi|297317882|gb|EFH48304.1| hypothetical protein ARALYDRAFT_489184 [Arabidopsis lyrata subsp. lyrata] Length = 339 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 184/299 (61%), Positives = 225/299 (75%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++V G+ PKKG T G +PVF T Sbjct: 44 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVAGVTPKKGGTEHLG----LPVFNT 98 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEAK T ANASVIYVP A AI+E + AE+ LIVCITEGIP DMVRVKA L +S Sbjct: 99 VAEAKAETKANASVIYVPAPFAAAAIMEGLAAELDLIVCITEGIPQHDMVRVKAALNSQS 158 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 159 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTC 218 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F AD TE IV++GEIGG+AEE+AA +K+ G KP+V Sbjct: 219 VGIGGDPFNGTNFVDCLEKFFADPQTEGIVLIGEIGGTAEEDAAALIKE---SGTDKPVV 275 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA++SGGKG A+DKI ++++AG+ + SPA+IG ++ E+ Sbjct: 276 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKSLRDAGVKVVESPAKIGAAMFEIFQE 334 >gi|309751160|gb|ADO81144.1| Succinyl-CoA synthetase, alpha subunit [Haemophilus influenzae R2866] Length = 293 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 183/299 (61%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP S DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEE A F+KD KP+V Sbjct: 176 VGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEVAIFIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|322833840|ref|YP_004213867.1| succinyl-CoA synthetase subunit alpha [Rahnella sp. Y9602] gi|321169041|gb|ADW74740.1| succinyl-CoA synthetase, alpha subunit [Rahnella sp. Y9602] Length = 290 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 173/297 (58%), Positives = 218/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILINKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+++A I LI+CITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVETTGATASVIYVPAPFCKDSILEALDAGIKLIICITEGIPTLDMLVVKVKLDQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + +IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 DAVMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDYGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEVIVMIGEIGGNAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ LL Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEAVKSLL 288 >gi|257464604|ref|ZP_05628975.1| hypothetical protein AM202_05095 [Actinobacillus minor 202] gi|257450264|gb|EEV24307.1| hypothetical protein AM202_05095 [Actinobacillus minor 202] Length = 289 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 176/298 (59%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGAQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP G DAI+E+I+A I LIVCITEGIP LDM+ +K +L ++ Sbjct: 56 TVREAVEATQATATVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMLEIKQKLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP+ CKIGIMP +I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPEECKIGIMPANIHKKGKIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L LF D TE+IVM+GEIGGSAEEEAA+F++ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILRLFEQDPETEAIVMIGEIGGSAEEEAAEFIRKHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEAAGVTTVRSLAEIGSALKRVLK 289 >gi|319409451|emb|CBI83100.1| succinyl-CoA synthetase, alpha chain [Bartonella schoenbuchensis R1] Length = 300 Score = 325 bits (834), Expect = 3e-87, Method: Composition-based stats. Identities = 234/299 (78%), Positives = 271/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+KNTKVLVQGLTGK GTFHTEQA+ Y TQ+VGGI+PKKG W G +P+F Sbjct: 1 MSILVNKNTKVLVQGLTGKTGTFHTEQALAYHGTQMVGGINPKKGGETWEGSKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE KE+T A+ASVIYVPP+GA AIIE+IEAEI LIVCITEGIPV+DMV VKA+LE+ Sbjct: 61 ASVAEGKEKTGADASVIYVPPAGAAAAIIEAIEAEIGLIVCITEGIPVMDMVEVKAKLEQ 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGILTP+ CKIGIMPGSIF+KGSVGI+SRSGTLTYEAVFQTS+E LGQ+T Sbjct: 121 SQSRLIGPNCPGILTPNECKIGIMPGSIFKKGSVGIVSRSGTLTYEAVFQTSREDLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEFIDVLE+FLAD+ TESIVM+GEIGGSAEEEAAQF+KDEAK+GRKKP+ Sbjct: 181 AIGIGGDPVKGTEFIDVLEMFLADDETESIVMIGEIGGSAEEEAAQFIKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI+AM+ AGI ++PSP++IG++LV +L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKISAMESAGIRVSPSPSQIGKTLVSVLK 299 >gi|229019030|ref|ZP_04175871.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH1273] gi|229025276|ref|ZP_04181696.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH1272] gi|229061438|ref|ZP_04198783.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH603] gi|229168574|ref|ZP_04296297.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH621] gi|228614980|gb|EEK72082.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH621] gi|228717861|gb|EEL69509.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH603] gi|228736029|gb|EEL86604.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH1272] gi|228742270|gb|EEL92429.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus AH1273] Length = 300 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 178/299 (59%), Positives = 230/299 (76%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTDIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++A+I L+VCITEGIPVLDMV VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAKIDLVVCITEGIPVLDMVNVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 HTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA++++ KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWVQANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPEGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVLKE 290 >gi|197284469|ref|YP_002150341.1| succinyl-CoA synthetase subunit alpha [Proteus mirabilis HI4320] gi|227356647|ref|ZP_03841033.1| succinyl-CoA synthetase alpha chain [Proteus mirabilis ATCC 29906] gi|194681956|emb|CAR41371.1| succinyl-CoA synthetase alpha chain [Proteus mirabilis HI4320] gi|227163155|gb|EEI48086.1| succinyl-CoA synthetase alpha chain [Proteus mirabilis ATCC 29906] Length = 290 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 176/299 (58%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGTAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ LL Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKSLLNK 290 >gi|145299310|ref|YP_001142151.1| succinyl-CoA ligase, alpha subunit [Aeromonas salmonicida subsp. salmonicida A449] gi|142852082|gb|ABO90403.1| succinyl-CoA ligase, alpha subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 290 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 175/298 (58%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+A I LIV ITEGIP LDM+ VK +L+++ Sbjct: 56 TVRDAVETTGATASVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTLDMLEVKVKLQET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFQNDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A +K A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAAEKFAALEDAGVKTVRSLADIGKALREVTG 289 >gi|311694416|gb|ADP97289.1| succinyl-CoA synthetase, alpha subunit [marine bacterium HP15] Length = 290 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGAQGTFHSEQAIAY-GTKMVGGVSPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A A+VIYVP DAIIE+ +A I LIVCITEGIP +DM+ K +++ Sbjct: 56 TVRDAVEATGAEATVIYVPAPFCKDAIIEAADAGIQLIVCITEGIPTIDMLYAKEYVDRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDFGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G+ FID+L L D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 IGIGGDPIPGSNFIDILALLEKDPETEAIVMIGEIGGTAEEEAAAYIKQNVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A+DK A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADDKFAALEDAGVRTVRSLAEIGQALKEVTG 289 >gi|170769129|ref|ZP_02903582.1| succinate-CoA ligase, alpha subunit [Escherichia albertii TW07627] gi|170122201|gb|EDS91132.1| succinate-CoA ligase, alpha subunit [Escherichia albertii TW07627] Length = 289 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I R G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHRPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 289 >gi|297620666|ref|YP_003708803.1| Succinyl-CoA synthetase, alpha subunit [Waddlia chondrophila WSU 86-1044] gi|297375967|gb|ADI37797.1| Succinyl-CoA synthetase, alpha subunit [Waddlia chondrophila WSU 86-1044] Length = 297 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 170/300 (56%), Positives = 225/300 (75%), Gaps = 10/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+K TKV+ QG+TG AG+FHTEQ + Y +Q VGG+ P KG G +PVF Sbjct: 1 MAILVNKKTKVMTQGITGNAGSFHTEQCLEY-GSQFVGGVTPWKGGQTCLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EAK+ T +A++I+VPP A +AI+E+ +A IPLIVCITEGIPV DM+ V +++ Sbjct: 56 TVKEAKKATGCDATMIFVPPPFAAEAILEAEDAGIPLIVCITEGIPVRDMLEVSQVMKRS 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SRLIGPNCPG++TP CKIGIMPG I ++G VGI+SRSGTLTYEAV+QT+Q LGQS+ Sbjct: 116 KKSRLIGPNCPGVITPGECKIGIMPGYIHQRGRVGIVSRSGTLTYEAVWQTTQLELGQSS 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT FIDVLELF D TE I+++GEIGG AEE+AA+++++ KP+ Sbjct: 176 CVGIGGDPLNGTNFIDVLELFENDPETEGILLIGEIGGDAEEQAAEWIRERCS----KPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 FVAG+TAPPGR MGHAGA+ISG +G A++KI A+K AG+ +A +PA +G++++ Sbjct: 232 AAFVAGQTAPPGRRMGHAGAIISGNQGTAQNKIEALKHAGVTVAETPADLGKAMLSAFNE 291 >gi|294676278|ref|YP_003576893.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Rhodobacter capsulatus SB 1003] gi|294475098|gb|ADE84486.1| succinyl-CoA synthetase (ADP-forming), alpha subunit [Rhodobacter capsulatus SB 1003] Length = 294 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 195/298 (65%), Positives = 242/298 (81%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+++TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG + G +PVF Sbjct: 1 MAVLVNEHTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T A+A+ IYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM+RVK L S Sbjct: 56 SVHEAKHVTGAHATAIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMRVKRALIDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPGSIF++GSVG++SRSGTLTYEAV QT+ GLGQS+A Sbjct: 116 KSRLIGPNCPGVMTPDACKIGIMPGSIFKRGSVGVVSRSGTLTYEAVKQTTDVGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVLE+FLAD T SI+M+GEIGGSAEEEAA+FL E K+GR KP Sbjct: 176 VGIGGDPIKGTEHIDVLEMFLADPETTSIIMIGEIGGSAEEEAAEFLMAEKKKGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA++SGGKG AE KI AMK AGI +A SPA +G ++++ + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGDAESKIEAMKRAGIVVADSPAHLGEAVLKAIK 293 >gi|15800433|ref|NP_286445.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O157:H7 EDL933] gi|15830008|ref|NP_308781.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O157:H7 str. Sakai] gi|16128704|ref|NP_415257.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli str. K-12 substr. MG1655] gi|26246696|ref|NP_752736.1| succinyl-CoA synthetase subunit alpha [Escherichia coli CFT073] gi|74311253|ref|YP_309672.1| succinyl-CoA synthetase subunit alpha [Shigella sonnei Ss046] gi|82543156|ref|YP_407103.1| succinyl-CoA synthetase subunit alpha [Shigella boydii Sb227] gi|89107586|ref|AP_001366.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli str. K-12 substr. W3110] gi|91209762|ref|YP_539748.1| succinyl-CoA synthetase subunit alpha [Escherichia coli UTI89] gi|110640937|ref|YP_668665.1| succinyl-CoA synthetase subunit alpha [Escherichia coli 536] gi|117622922|ref|YP_851835.1| succinyl-CoA synthetase subunit alpha [Escherichia coli APEC O1] gi|157158239|ref|YP_001461888.1| succinyl-CoA synthetase subunit alpha [Escherichia coli E24377A] gi|157160208|ref|YP_001457526.1| succinyl-CoA synthetase subunit alpha [Escherichia coli HS] gi|168750660|ref|ZP_02775682.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4113] gi|168757182|ref|ZP_02782189.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4401] gi|168764010|ref|ZP_02789017.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4501] gi|168767169|ref|ZP_02792176.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4486] gi|168777545|ref|ZP_02802552.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4196] gi|168779212|ref|ZP_02804219.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4076] gi|168786882|ref|ZP_02811889.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC869] gi|168801362|ref|ZP_02826369.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC508] gi|170020927|ref|YP_001725881.1| succinyl-CoA synthetase subunit alpha [Escherichia coli ATCC 8739] gi|170080395|ref|YP_001729715.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli str. K-12 substr. DH10B] gi|170682614|ref|YP_001742829.1| succinyl-CoA synthetase subunit alpha [Escherichia coli SMS-3-5] gi|187731649|ref|YP_001879384.1| succinyl-CoA synthetase subunit alpha [Shigella boydii CDC 3083-94] gi|188494364|ref|ZP_03001634.1| succinyl-CoA synthetase alpha chain [Escherichia coli 53638] gi|191167206|ref|ZP_03029025.1| succinate-CoA ligase, alpha subunit [Escherichia coli B7A] gi|191174037|ref|ZP_03035553.1| succinate-CoA ligase, alpha subunit [Escherichia coli F11] gi|193065546|ref|ZP_03046614.1| succinate-CoA ligase, alpha subunit [Escherichia coli E22] gi|193070667|ref|ZP_03051604.1| succinate-CoA ligase, alpha subunit [Escherichia coli E110019] gi|194429074|ref|ZP_03061605.1| succinate-CoA ligase, alpha subunit [Escherichia coli B171] gi|194433979|ref|ZP_03066250.1| succinate-CoA ligase, alpha subunit [Shigella dysenteriae 1012] gi|194439235|ref|ZP_03071315.1| succinate-CoA ligase, alpha subunit [Escherichia coli 101-1] gi|195939070|ref|ZP_03084452.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O157:H7 str. EC4024] gi|208807584|ref|ZP_03249921.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4206] gi|208816368|ref|ZP_03257547.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4045] gi|208823169|ref|ZP_03263487.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4042] gi|209395766|ref|YP_002269352.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4115] gi|209917979|ref|YP_002292063.1| succinyl-CoA synthetase subunit alpha [Escherichia coli SE11] gi|217324254|ref|ZP_03440338.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. TW14588] gi|218549707|ref|YP_002383498.1| succinyl-CoA synthetase subunit alpha [Escherichia fergusonii ATCC 35469] gi|218553255|ref|YP_002386168.1| succinyl-CoA synthetase subunit alpha [Escherichia coli IAI1] gi|218557644|ref|YP_002390557.1| succinyl-CoA synthetase subunit alpha [Escherichia coli S88] gi|218688522|ref|YP_002396734.1| succinyl-CoA synthetase subunit alpha [Escherichia coli ED1a] gi|218694152|ref|YP_002401819.1| succinyl-CoA synthetase subunit alpha [Escherichia coli 55989] gi|218699083|ref|YP_002406712.1| succinyl-CoA synthetase subunit alpha [Escherichia coli IAI39] gi|218704045|ref|YP_002411564.1| succinyl-CoA synthetase subunit alpha [Escherichia coli UMN026] gi|227884305|ref|ZP_04002110.1| succinyl-CoA synthetase subunit alpha [Escherichia coli 83972] gi|237707309|ref|ZP_04537790.1| succinyl-CoA synthetase subunit alpha [Escherichia sp. 3_2_53FAA] gi|238899993|ref|YP_002925789.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli BW2952] gi|253774301|ref|YP_003037132.1| succinyl-CoA synthetase subunit alpha [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160798|ref|YP_003043906.1| succinyl-CoA synthetase subunit alpha [Escherichia coli B str. REL606] gi|254791875|ref|YP_003076712.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O157:H7 str. TW14359] gi|256021198|ref|ZP_05435063.1| succinyl-CoA synthetase subunit alpha [Shigella sp. D9] gi|256023670|ref|ZP_05437535.1| succinyl-CoA synthetase subunit alpha [Escherichia sp. 4_1_40B] gi|260842935|ref|YP_003220713.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O103:H2 str. 12009] gi|260853963|ref|YP_003227854.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O26:H11 str. 11368] gi|260866859|ref|YP_003233261.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O111:H- str. 11128] gi|261224429|ref|ZP_05938710.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261254580|ref|ZP_05947113.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O157:H7 str. FRIK966] gi|291281661|ref|YP_003498479.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli O55:H7 str. CB9615] gi|293403972|ref|ZP_06647966.1| succinyl-CoA synthetase alpha subunit [Escherichia coli FVEC1412] gi|293409102|ref|ZP_06652678.1| succinyl-CoA ligase subunit alpha [Escherichia coli B354] gi|293414006|ref|ZP_06656655.1| succinyl-CoA ligase subunit alpha [Escherichia coli B185] gi|293432997|ref|ZP_06661425.1| succinyl-CoA ligase subunit alpha [Escherichia coli B088] gi|298379748|ref|ZP_06989353.1| succinyl-CoA ligase subunit alpha [Escherichia coli FVEC1302] gi|300816376|ref|ZP_07096598.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 107-1] gi|300822984|ref|ZP_07103119.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 119-7] gi|300900723|ref|ZP_07118872.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 198-1] gi|300906986|ref|ZP_07124655.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 84-1] gi|300918388|ref|ZP_07134988.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 115-1] gi|300929467|ref|ZP_07144935.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 187-1] gi|300937815|ref|ZP_07152611.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 21-1] gi|300957676|ref|ZP_07169865.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 175-1] gi|300972377|ref|ZP_07171914.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 200-1] gi|300993154|ref|ZP_07180237.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 45-1] gi|301020811|ref|ZP_07184875.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 69-1] gi|301027091|ref|ZP_07190463.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 196-1] gi|301051352|ref|ZP_07198175.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 185-1] gi|301305215|ref|ZP_07211313.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 124-1] gi|301327920|ref|ZP_07221091.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 78-1] gi|301648032|ref|ZP_07247799.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 146-1] gi|306812863|ref|ZP_07447056.1| succinyl-CoA synthetase subunit alpha [Escherichia coli NC101] gi|307137340|ref|ZP_07496696.1| succinyl-CoA synthetase subunit alpha [Escherichia coli H736] gi|307314807|ref|ZP_07594401.1| succinyl-CoA synthetase, alpha subunit [Escherichia coli W] gi|309797441|ref|ZP_07691833.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 145-7] gi|312970806|ref|ZP_07784985.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli 1827-70] gi|331641229|ref|ZP_08342364.1| succinyl-CoA synthetase subunit alpha [Escherichia coli H736] gi|331645877|ref|ZP_08346980.1| succinyl-CoA synthetase subunit alpha [Escherichia coli M605] gi|331651726|ref|ZP_08352745.1| succinyl-CoA synthetase subunit alpha [Escherichia coli M718] gi|331662081|ref|ZP_08363004.1| succinyl-CoA synthetase subunit alpha [Escherichia coli TA143] gi|331667095|ref|ZP_08367960.1| succinyl-CoA synthetase subunit alpha [Escherichia coli TA271] gi|331672243|ref|ZP_08373034.1| succinyl-CoA synthetase subunit alpha [Escherichia coli TA280] gi|331676410|ref|ZP_08377107.1| succinyl-CoA synthetase subunit alpha [Escherichia coli H591] gi|331682159|ref|ZP_08382781.1| succinyl-CoA synthetase subunit alpha [Escherichia coli H299] gi|332282424|ref|ZP_08394837.1| succinyl-CoA synthetase subunit alpha [Shigella sp. D9] gi|84027800|sp|P0AGF1|SUCD_ECO57 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|84027801|sp|P0AGF0|SUCD_ECOL6 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|84027802|sp|P0AGE9|SUCD_ECOLI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|12513647|gb|AAG55053.1|AE005251_2 succinyl-CoA synthetase, alpha subunit [Escherichia coli O157:H7 str. EDL933] gi|26107095|gb|AAN79279.1|AE016757_183 Succinyl-CoA synthetase alpha chain [Escherichia coli CFT073] gi|146204|gb|AAA23900.1| succinyl-CoA synthetase alpha-subunit [Escherichia coli K-12] gi|1651324|dbj|BAA35395.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli str. K12 substr. W3110] gi|1786949|gb|AAC73823.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli str. K-12 substr. MG1655] gi|13360213|dbj|BAB34177.1| succinyl-CoA synthetase alpha subunit [Escherichia coli O157:H7 str. Sakai] gi|73854730|gb|AAZ87437.1| succinyl-CoA synthetase, alpha subunit [Shigella sonnei Ss046] gi|81244567|gb|ABB65275.1| succinyl-CoA synthetase, alpha subunit [Shigella boydii Sb227] gi|91071336|gb|ABE06217.1| succinyl-CoA synthetase, alpha subunit [Escherichia coli UTI89] gi|110342529|gb|ABG68766.1| succinyl-CoA synthetase alpha chain [Escherichia coli 536] gi|115512046|gb|ABJ00121.1| succinyl-CoA synthetase alpha subunit [Escherichia coli APEC O1] gi|157065888|gb|ABV05143.1| succinate-CoA ligase, alpha subunit [Escherichia coli HS] gi|157080269|gb|ABV19977.1| succinate-CoA ligase, alpha subunit [Escherichia coli E24377A] gi|169755855|gb|ACA78554.1| succinyl-CoA synthetase, alpha subunit [Escherichia coli ATCC 8739] gi|169888230|gb|ACB01937.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli str. K-12 substr. DH10B] gi|170520332|gb|ACB18510.1| succinate-CoA ligase, alpha subunit [Escherichia coli SMS-3-5] gi|187428641|gb|ACD07915.1| succinate-CoA ligase, alpha subunit [Shigella boydii CDC 3083-94] gi|187767223|gb|EDU31067.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4196] gi|188015186|gb|EDU53308.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4113] gi|188489563|gb|EDU64666.1| succinyl-CoA synthetase alpha chain [Escherichia coli 53638] gi|189002716|gb|EDU71702.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4076] gi|189355809|gb|EDU74228.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4401] gi|189363351|gb|EDU81770.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4486] gi|189365933|gb|EDU84349.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4501] gi|189373079|gb|EDU91495.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC869] gi|189376494|gb|EDU94910.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC508] gi|190902754|gb|EDV62484.1| succinate-CoA ligase, alpha subunit [Escherichia coli B7A] gi|190905645|gb|EDV65268.1| succinate-CoA ligase, alpha subunit [Escherichia coli F11] gi|192926835|gb|EDV81461.1| succinate-CoA ligase, alpha subunit [Escherichia coli E22] gi|192956055|gb|EDV86521.1| succinate-CoA ligase, alpha subunit [Escherichia coli E110019] gi|194412905|gb|EDX29196.1| succinate-CoA ligase, alpha subunit [Escherichia coli B171] gi|194417744|gb|EDX33842.1| succinate-CoA ligase, alpha subunit [Shigella dysenteriae 1012] gi|194421820|gb|EDX37827.1| succinate-CoA ligase, alpha subunit [Escherichia coli 101-1] gi|208727385|gb|EDZ76986.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4206] gi|208733016|gb|EDZ81704.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4045] gi|208737362|gb|EDZ85046.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4042] gi|209157166|gb|ACI34599.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. EC4115] gi|209776458|gb|ACI86541.1| succinyl-CoA synthetase alpha subunit [Escherichia coli] gi|209776460|gb|ACI86542.1| succinyl-CoA synthetase alpha subunit [Escherichia coli] gi|209776462|gb|ACI86543.1| succinyl-CoA synthetase alpha subunit [Escherichia coli] gi|209776466|gb|ACI86545.1| succinyl-CoA synthetase alpha subunit [Escherichia coli] gi|209911238|dbj|BAG76312.1| succinyl-CoA synthase alpha subunit [Escherichia coli SE11] gi|217320475|gb|EEC28899.1| succinate-CoA ligase, alpha subunit [Escherichia coli O157:H7 str. TW14588] gi|218350884|emb|CAU96582.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli 55989] gi|218357248|emb|CAQ89883.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia fergusonii ATCC 35469] gi|218360023|emb|CAQ97570.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli IAI1] gi|218364413|emb|CAR02093.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli S88] gi|218369069|emb|CAR16823.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli IAI39] gi|218426086|emb|CAR06904.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli ED1a] gi|218431142|emb|CAR12018.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli UMN026] gi|222032465|emb|CAP75204.1| Succinyl-CoA ligase [adP-forming] subunit alpha [Escherichia coli LF82] gi|226898519|gb|EEH84778.1| succinyl-CoA synthetase subunit alpha [Escherichia sp. 3_2_53FAA] gi|227838726|gb|EEJ49192.1| succinyl-CoA synthetase subunit alpha [Escherichia coli 83972] gi|238863593|gb|ACR65591.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli BW2952] gi|242376490|emb|CAQ31194.1| succinyl-CoA synthetase, alpha subunit, subunit of succinyl-CoA synthetase [Escherichia coli BL21(DE3)] gi|253325345|gb|ACT29947.1| succinyl-CoA synthetase, alpha subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972699|gb|ACT38370.1| succinyl-CoA synthetase subunit alpha [Escherichia coli B str. REL606] gi|253976893|gb|ACT42563.1| succinyl-CoA synthetase subunit alpha [Escherichia coli BL21(DE3)] gi|254591275|gb|ACT70636.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O157:H7 str. TW14359] gi|257752612|dbj|BAI24114.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O26:H11 str. 11368] gi|257758082|dbj|BAI29579.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O103:H2 str. 12009] gi|257763215|dbj|BAI34710.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O111:H- str. 11128] gi|260450118|gb|ACX40540.1| succinyl-CoA synthetase, alpha subunit [Escherichia coli DH1] gi|281177871|dbj|BAI54201.1| succinyl-CoA synthetase alpha subunit [Escherichia coli SE15] gi|284920507|emb|CBG33569.1| succinyl-CoA synthetase alpha chain [Escherichia coli 042] gi|290761534|gb|ADD55495.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli O55:H7 str. CB9615] gi|291323816|gb|EFE63238.1| succinyl-CoA ligase subunit alpha [Escherichia coli B088] gi|291428558|gb|EFF01583.1| succinyl-CoA synthetase alpha subunit [Escherichia coli FVEC1412] gi|291434064|gb|EFF07037.1| succinyl-CoA ligase subunit alpha [Escherichia coli B185] gi|291469570|gb|EFF12054.1| succinyl-CoA ligase subunit alpha [Escherichia coli B354] gi|294493816|gb|ADE92572.1| succinate-CoA ligase, alpha subunit [Escherichia coli IHE3034] gi|298279446|gb|EFI20954.1| succinyl-CoA ligase subunit alpha [Escherichia coli FVEC1302] gi|299879425|gb|EFI87636.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 196-1] gi|300297014|gb|EFJ53399.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 185-1] gi|300309176|gb|EFJ63696.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 200-1] gi|300315594|gb|EFJ65378.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 175-1] gi|300355782|gb|EFJ71652.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 198-1] gi|300398457|gb|EFJ81995.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 69-1] gi|300401207|gb|EFJ84745.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 84-1] gi|300406684|gb|EFJ90222.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 45-1] gi|300414451|gb|EFJ97761.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 115-1] gi|300457180|gb|EFK20673.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 21-1] gi|300462576|gb|EFK26069.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 187-1] gi|300524525|gb|EFK45594.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 119-7] gi|300531066|gb|EFK52128.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 107-1] gi|300839527|gb|EFK67287.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 124-1] gi|300845563|gb|EFK73323.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 78-1] gi|301073858|gb|EFK88664.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 146-1] gi|305853626|gb|EFM54065.1| succinyl-CoA synthetase subunit alpha [Escherichia coli NC101] gi|306905705|gb|EFN36233.1| succinyl-CoA synthetase, alpha subunit [Escherichia coli W] gi|307552580|gb|ADN45355.1| succinyl-CoA ligase subunit alpha [Escherichia coli ABU 83972] gi|307627857|gb|ADN72161.1| succinyl-CoA synthetase subunit alpha [Escherichia coli UM146] gi|308118965|gb|EFO56227.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 145-7] gi|309700950|emb|CBJ00247.1| succinyl-CoA synthetase alpha chain [Escherichia coli ETEC H10407] gi|310336567|gb|EFQ01734.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli 1827-70] gi|312945253|gb|ADR26080.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O83:H1 str. NRG 857C] gi|315059971|gb|ADT74298.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli W] gi|315135384|dbj|BAJ42543.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli DH1] gi|315257646|gb|EFU37614.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 85-1] gi|315287157|gb|EFU46569.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 110-3] gi|315292642|gb|EFU51994.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 153-1] gi|315299269|gb|EFU58521.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 16-3] gi|315614603|gb|EFU95245.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli 3431] gi|320177272|gb|EFW52278.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Shigella dysenteriae CDC 74-1112] gi|320179431|gb|EFW54388.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Shigella boydii ATCC 9905] gi|320182933|gb|EFW57802.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Shigella flexneri CDC 796-83] gi|320193123|gb|EFW67763.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Escherichia coli O157:H7 str. EC1212] gi|320194114|gb|EFW68746.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Escherichia coli WV_060327] gi|320198153|gb|EFW72757.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Escherichia coli EC4100B] gi|320637976|gb|EFX07745.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O157:H7 str. G5101] gi|320643371|gb|EFX12551.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O157:H- str. 493-89] gi|320648720|gb|EFX17353.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O157:H- str. H 2687] gi|320654304|gb|EFX22357.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659937|gb|EFX27479.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O55:H7 str. USDA 5905] gi|320664761|gb|EFX31899.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O157:H7 str. LSU-61] gi|323153758|gb|EFZ40005.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli EPECa14] gi|323163887|gb|EFZ49697.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella sonnei 53G] gi|323170848|gb|EFZ56498.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli LT-68] gi|323180033|gb|EFZ65589.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli 1180] gi|323185113|gb|EFZ70479.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli 1357] gi|323379469|gb|ADX51737.1| succinyl-CoA synthetase, alpha subunit [Escherichia coli KO11] gi|323938306|gb|EGB34563.1| succinate-CoA ligase [Escherichia coli E1520] gi|323942950|gb|EGB39114.1| succinate-CoA ligase [Escherichia coli E482] gi|323952713|gb|EGB48581.1| succinate-CoA ligase [Escherichia coli H252] gi|323958473|gb|EGB54179.1| succinate-CoA ligase [Escherichia coli H263] gi|323963109|gb|EGB58679.1| succinate-CoA ligase [Escherichia coli H489] gi|323967435|gb|EGB62855.1| succinate-CoA ligase [Escherichia coli M863] gi|323972013|gb|EGB67233.1| succinate-CoA ligase [Escherichia coli TA007] gi|323976301|gb|EGB71391.1| succinate-CoA ligase [Escherichia coli TW10509] gi|324009578|gb|EGB78797.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 57-2] gi|324010450|gb|EGB79669.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 60-1] gi|324020365|gb|EGB89584.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 117-3] gi|324114838|gb|EGC08806.1| succinate-CoA ligase [Escherichia fergusonii B253] gi|324116269|gb|EGC10190.1| succinate-CoA ligase [Escherichia coli E1167] gi|326341533|gb|EGD65323.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Escherichia coli O157:H7 str. 1044] gi|326345751|gb|EGD69490.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Escherichia coli O157:H7 str. 1125] gi|327254407|gb|EGE66029.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli STEC_7v] gi|330910477|gb|EGH38987.1| succinyl-CoA ligase [ADP-forming] alpha chain [Escherichia coli AA86] gi|331038027|gb|EGI10247.1| succinyl-CoA synthetase subunit alpha [Escherichia coli H736] gi|331044629|gb|EGI16756.1| succinyl-CoA synthetase subunit alpha [Escherichia coli M605] gi|331050004|gb|EGI22062.1| succinyl-CoA synthetase subunit alpha [Escherichia coli M718] gi|331060503|gb|EGI32467.1| succinyl-CoA synthetase subunit alpha [Escherichia coli TA143] gi|331065451|gb|EGI37344.1| succinyl-CoA synthetase subunit alpha [Escherichia coli TA271] gi|331070438|gb|EGI41802.1| succinyl-CoA synthetase subunit alpha [Escherichia coli TA280] gi|331075903|gb|EGI47200.1| succinyl-CoA synthetase subunit alpha [Escherichia coli H591] gi|331080583|gb|EGI51759.1| succinyl-CoA synthetase subunit alpha [Escherichia coli H299] gi|332093789|gb|EGI98843.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella boydii 5216-82] gi|332096447|gb|EGJ01443.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella dysenteriae 155-74] gi|332097685|gb|EGJ02660.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella boydii 3594-74] gi|332104776|gb|EGJ08122.1| succinyl-CoA synthetase subunit alpha [Shigella sp. D9] gi|332342064|gb|AEE55398.1| succinyl-CoA ligase, alpha subunit SucD [Escherichia coli UMNK88] Length = 289 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 289 >gi|28897624|ref|NP_797229.1| succinyl-CoA synthetase subunit alpha [Vibrio parahaemolyticus RIMD 2210633] gi|153838601|ref|ZP_01991268.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Vibrio parahaemolyticus AQ3810] gi|260365989|ref|ZP_05778474.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio parahaemolyticus K5030] gi|260878221|ref|ZP_05890576.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio parahaemolyticus AN-5034] gi|260895658|ref|ZP_05904154.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio parahaemolyticus Peru-466] gi|28805836|dbj|BAC59113.1| succinyl-CoA synthase, alpha subunit [Vibrio parahaemolyticus RIMD 2210633] gi|149748019|gb|EDM58878.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Vibrio parahaemolyticus AQ3810] gi|308088190|gb|EFO37885.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio parahaemolyticus Peru-466] gi|308090179|gb|EFO39874.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio parahaemolyticus AN-5034] gi|308111267|gb|EFO48807.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Vibrio parahaemolyticus K5030] Length = 290 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 180/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQIHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIGQGLREVTG 289 >gi|215485747|ref|YP_002328178.1| succinyl-CoA synthetase subunit alpha [Escherichia coli O127:H6 str. E2348/69] gi|312965159|ref|ZP_07779396.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli 2362-75] gi|215263819|emb|CAS08156.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O127:H6 str. E2348/69] gi|312290250|gb|EFR18133.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli 2362-75] gi|323191073|gb|EFZ76338.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli RN587/1] Length = 289 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 173/297 (58%), Positives = 218/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLIVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 288 >gi|293392047|ref|ZP_06636381.1| succinyl-CoA ligase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952581|gb|EFE02700.1| succinyl-CoA ligase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 290 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ NTKV+ QG TG GTFH++QA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILINNNTKVICQGFTGGQGTFHSQQALAY-GTKLVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A A+VIYVP G DAI+E+I+A I LIVCITEGIP LDM+ VK RL ++ Sbjct: 56 TVRDAVEATGATATVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMLVVKQRLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPEECKIGIMPGDIHKKGKIGIISRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ F+D+L+LF D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFVDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAFIKQHI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP + MGHAGA+ISGGKG A++K A + AG+ S A IG +L E+L Sbjct: 232 SYIAGVTAPKDKRMGHAGAIISGGKGTADEKFAAFEAAGVKTVRSLADIGAALREVLKK 290 >gi|299133569|ref|ZP_07026763.1| succinyl-CoA synthetase, alpha subunit [Afipia sp. 1NLS2] gi|298591405|gb|EFI51606.1| succinyl-CoA synthetase, alpha subunit [Afipia sp. 1NLS2] Length = 302 Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats. Identities = 211/298 (70%), Positives = 252/298 (84%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+++DKNTKV+ QG TGK GTFH+E AI Y T++VGG P KG + G +PVF Sbjct: 1 MSVMIDKNTKVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA+ +T A+ASV+YVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 SVAEARAKTGADASVVYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPG++T CKIGIMP +IF+ G+VGI+SRSGTLTYEAVFQT+Q G GQ+TA Sbjct: 116 KSRLLGPNCPGVVTAGECKIGIMPTNIFKPGNVGIVSRSGTLTYEAVFQTTQVGFGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD+ TESI+M+GEIGGSAEE+AAQFLKDEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADDKTESIIMIGEIGGSAEEDAAQFLKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AM+ AGI ++ SPAR+G +LVELL Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIAAMEAAGIAVSASPARLGSTLVELLK 293 >gi|157375946|ref|YP_001474546.1| succinyl-CoA synthetase, alpha subunit [Shewanella sediminis HAW-EB3] gi|157318320|gb|ABV37418.1| succinyl-CoA synthetase, alpha subunit [Shewanella sediminis HAW-EB3] Length = 290 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 175/298 (58%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAIDY-GTQMVGGVSPGKGGQVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A A+VIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVAETGATATVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA++++ KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPLTEAIVMIGEIGGTAEEEAAEYIQANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLAEIGKALRTKTG 289 >gi|34580487|ref|ZP_00141967.1| succinyl-CoA synthetase alpha chain [Rickettsia sibirica 246] gi|28261872|gb|EAA25376.1| succinyl-CoA synthetase alpha chain [Rickettsia sibirica 246] Length = 292 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 179/299 (59%), Positives = 232/299 (77%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K T+V+ QG TG GTFH+EQAI Y T +VGG+ P KG +++PV+ Sbjct: 1 MAILINKKTQVICQGFTGLQGTFHSEQAIAY-GTNMVGGVTPGKGGHTH----LDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+AEI ++VCITEGIPVLDMV+VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMVKVKRALAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +E+FL D+ T++I+M+GEIGG+AEE+AA+F+K KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDAAEFIKQSKI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPG+ MGHAGA+I G G AEDK+ A++ AG+ I SPA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIVGRTGSAEDKLEALQSAGVIITRSPADIGKTMLDLLNK 291 >gi|29654689|ref|NP_820381.1| succinate-CoA ligase (ADP-forming), alpha subunit [Coxiella burnetii RSA 493] gi|153207709|ref|ZP_01946356.1| succinate-CoA ligase (ADP-forming), alpha subunit [Coxiella burnetii 'MSU Goat Q177'] gi|154706949|ref|YP_001424007.1| succinyl-CoA synthetase alpha chain [Coxiella burnetii Dugway 5J108-111] gi|212212235|ref|YP_002303171.1| succinyl-CoA synthetase alpha chain [Coxiella burnetii CbuG_Q212] gi|212218993|ref|YP_002305780.1| succinyl-CoA synthetase alpha chain [Coxiella burnetii CbuK_Q154] gi|30581056|sp|P53591|SUCD_COXBU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|29541957|gb|AAO90895.1| succinyl-CoA synthetase alpha chain [Coxiella burnetii RSA 493] gi|120576405|gb|EAX33029.1| succinate-CoA ligase (ADP-forming), alpha subunit [Coxiella burnetii 'MSU Goat Q177'] gi|154356235|gb|ABS77697.1| succinyl-CoA synthetase alpha chain [Coxiella burnetii Dugway 5J108-111] gi|212010645|gb|ACJ18026.1| succinyl-CoA synthetase alpha chain [Coxiella burnetii CbuG_Q212] gi|212013255|gb|ACJ20635.1| succinyl-CoA synthetase alpha chain [Coxiella burnetii CbuK_Q154] Length = 294 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 176/299 (58%), Positives = 225/299 (75%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK T+VL QG TGK GTFH+EQAI Y TQ+VGG+ P KG G +P+F Sbjct: 1 MSILIDKETRVLCQGFTGKQGTFHSEQAIEY-GTQMVGGVTPGKGGQSHLG----LPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E T+A+A++I+VP D+IIE+++A + L+VCITEGIPVLDM+ VKA L + Sbjct: 56 SVHEAVEETSADATMIFVPAPFCKDSIIEAVDAGVRLVVCITEGIPVLDMLEVKAYLRQH 115 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPNCPG++TP CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q G GQST Sbjct: 116 PDVRMIGPNCPGVITPGECKIGIMPGHIHQRGKVGIVSRSGTLTYEAVNQTTQMGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT FIDVLE+F D T++IVMVGEIGG+AEEEAA+F++ KKP+ Sbjct: 176 CVGIGGDPIPGTSFIDVLEMFEKDSQTQAIVMVGEIGGTAEEEAAEFIQSNV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + ++AG TAPPG+ MGHAGA+I+GGKG A DK A++ AG+ + SPA IG+ + E G Sbjct: 232 ISYIAGVTAPPGKRMGHAGAIIAGGKGTAADKYAALEAAGVFVVKSPAEIGKGVAEATG 290 >gi|283833986|ref|ZP_06353727.1| succinyl-CoA synthetase subunit alpha [Citrobacter youngae ATCC 29220] gi|291070120|gb|EFE08229.1| succinyl-CoA synthetase subunit alpha [Citrobacter youngae ATCC 29220] Length = 289 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVIK 289 >gi|301774949|ref|XP_002922907.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial-like [Ailuropoda melanoleuca] Length = 586 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 182/298 (61%), Positives = 226/298 (75%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QG TGK GTFH++QA+ Y TQ+VGG P KG G +PVF TV Sbjct: 290 LYVDKNTKVICQGFTGKQGTFHSQQALDY-GTQLVGGTTPGKGGQTHLG----LPVFNTV 344 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE T A ASVIYVPP A AI E++EAE+PL+VCITEGIP DMVRVK +L + Sbjct: 345 KEAKEETGATASVIYVPPPFAAAAINEAVEAEVPLVVCITEGIPQQDMVRVKHKLLRQGK 404 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 405 TRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 464 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 465 GIGGDPFNGTDFIDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKAKPVVS 524 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 525 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEK 582 >gi|24111995|ref|NP_706505.1| succinyl-CoA synthetase subunit alpha [Shigella flexneri 2a str. 301] gi|30062108|ref|NP_836279.1| succinyl-CoA synthetase subunit alpha [Shigella flexneri 2a str. 2457T] gi|110804644|ref|YP_688164.1| succinyl-CoA synthetase subunit alpha [Shigella flexneri 5 str. 8401] gi|24050809|gb|AAN42212.1| succinyl-CoA synthetase, alpha subunit [Shigella flexneri 2a str. 301] gi|30040353|gb|AAP16085.1| succinyl-CoA synthetase, alpha subunit [Shigella flexneri 2a str. 2457T] gi|110614192|gb|ABF02859.1| succinyl-CoA synthetase, alpha subunit [Shigella flexneri 5 str. 8401] gi|281599956|gb|ADA72940.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri 2002017] gi|313649630|gb|EFS14054.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri 2a str. 2457T] gi|332760906|gb|EGJ91194.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri 4343-70] gi|332761313|gb|EGJ91599.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri 2747-71] gi|332763953|gb|EGJ94191.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri K-671] gi|332768174|gb|EGJ98359.1| succinyl-CoA synthetase, alpha subunit [Shigella flexneri 2930-71] gi|333007362|gb|EGK26842.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri VA-6] gi|333008045|gb|EGK27521.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri K-218] gi|333010155|gb|EGK29590.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri K-272] gi|333021110|gb|EGK40367.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri K-227] gi|333021490|gb|EGK40740.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella flexneri K-304] Length = 289 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A+ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGASASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 289 >gi|157828469|ref|YP_001494711.1| succinyl-CoA synthetase subunit alpha [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933187|ref|YP_001649976.1| succinyl-CoA synthetase subunit alpha [Rickettsia rickettsii str. Iowa] gi|13235367|emb|CAC33660.1| Succinyl-CoA synthetase alpha subunit [Rickettsia rickettsii] gi|157800950|gb|ABV76203.1| succinyl-CoA synthetase subunit alpha [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908274|gb|ABY72570.1| succinyl-CoA synthetase alpha chain [Rickettsia rickettsii str. Iowa] Length = 292 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 178/299 (59%), Positives = 232/299 (77%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K T+V+ QG TG GTFH+EQAI Y T +VGG+ P KG +++PV+ Sbjct: 1 MAILINKKTQVICQGFTGLQGTFHSEQAIAY-GTNMVGGVTPGKGGHTH----LDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+AEI ++VCITEGIPVLDMV+VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMVKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +E+FL D+ T++++M+GEIGG+AEE+AA+F+K KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIEMFLKDDETKAVIMIGEIGGNAEEDAAEFIKQSKI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPG+ MGHAGA+I G G AEDK+ A++ AG+ I SPA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIVGRTGSAEDKLEALQSAGVVITRSPADIGKTMLDLLNK 291 >gi|89098657|ref|ZP_01171539.1| succinyl-CoA synthetase alpha subunit [Bacillus sp. NRRL B-14911] gi|89086619|gb|EAR65738.1| succinyl-CoA synthetase alpha subunit [Bacillus sp. NRRL B-14911] Length = 300 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 173/299 (57%), Positives = 225/299 (75%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+TKV+VQG+TG FHT+Q + Y TQ+VGG P KG G VPVF Sbjct: 1 MSVFINKDTKVIVQGITGSTALFHTKQMLEY-GTQIVGGTTPGKGGMEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP + A DAI+E+++AE+ L +CITE IPVLDMV+VK +E Sbjct: 56 TVQEAVKETGATASVIYVPAAFAADAILEAVDAELDLAICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I KG VG++SRSGTLTYEAV Q +Q G+GQSTA Sbjct: 116 KTRLVGPNCPGVITPDECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLTQAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T++++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPETKAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI M E GI +A +P+ +G +L+++L Sbjct: 232 GFIGGRTAPPGKRMGHAGAIISGGKGTADEKIRVMNECGIQVADTPSVMGETLIKVLKE 290 >gi|157369513|ref|YP_001477502.1| succinyl-CoA synthetase subunit alpha [Serratia proteamaculans 568] gi|157321277|gb|ABV40374.1| succinyl-CoA synthetase, alpha subunit [Serratia proteamaculans 568] Length = 290 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDTGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEAVKAVLNR 290 >gi|157964515|ref|YP_001499339.1| succinyl-CoA synthetase subunit alpha [Rickettsia massiliae MTU5] gi|157844291|gb|ABV84792.1| Succinyl-CoA synthetase alpha chain [Rickettsia massiliae MTU5] Length = 292 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 178/299 (59%), Positives = 234/299 (78%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K T+V+ QG TG GTFH+EQAI Y T +VGG+ P KG +++PV+ Sbjct: 1 MAILINKKTQVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGHTH----LDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+A+I ++VCITEGIPVLDMV+VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAKIEVVVCITEGIPVLDMVKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +E+FL D+ T++I+M+GEIGG+AEE+AA+F+K KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDAAEFIKQSKI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPG+ MGHAGA+I+GG G A+DK+ A++ AG+ I SPA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIAGGTGSAKDKLEALQSAGVTITRSPADIGKTMLDLLNK 291 >gi|228992563|ref|ZP_04152490.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus pseudomycoides DSM 12442] gi|228998611|ref|ZP_04158198.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus mycoides Rock3-17] gi|229006111|ref|ZP_04163799.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus mycoides Rock1-4] gi|228755187|gb|EEM04544.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus mycoides Rock1-4] gi|228761079|gb|EEM10038.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus mycoides Rock3-17] gi|228767197|gb|EEM15833.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus pseudomycoides DSM 12442] Length = 300 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 180/299 (60%), Positives = 231/299 (77%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTEIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++AEI L+VCITEGIPVLDMV+VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAEIDLVVCITEGIPVLDMVKVKKYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 QTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPAGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLIAVLKE 290 >gi|229586710|ref|YP_002845211.1| succinyl-CoA synthetase subunit alpha [Rickettsia africae ESF-5] gi|228021760|gb|ACP53468.1| Succinyl-CoA synthetase alpha chain [Rickettsia africae ESF-5] Length = 291 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 178/297 (59%), Positives = 232/297 (78%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K T+V+ QG TG GTFH+EQAI Y T +VGG+ P KG +++PV+ Sbjct: 1 MAILINKKTQVICQGFTGLQGTFHSEQAIAY-GTNMVGGVTPGKGGHTH----LDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+AEI ++VCITEGIPVLDM++VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMLKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +E+FL D+ T++I+M+GEIGG+AEE+AA+F+K KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDAAEFIKQSKI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPG+ MGHAGA+I G G AEDK+ A++ AG+ I SPA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIVGRTGSAEDKLEALQSAGVIITRSPADIGKTMLDLL 289 >gi|188580839|ref|YP_001924284.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium populi BJ001] gi|179344337|gb|ACB79749.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium populi BJ001] Length = 294 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 223/298 (74%), Positives = 256/298 (85%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+NTKV+ QG TGK GTFH+EQAI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDQNTKVICQGFTGKNGTFHSEQAIAY-GTKMVGGTSPGKGGSQHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E T A+ASV+YVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK LE S Sbjct: 56 TVAEAREATGADASVVYVPPPGAADAICEAIQAEIPLIVCITEGIPVLDMVRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T KIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+ EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVVTAGESKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTVEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFI +LELFLADE T+SIVM+GEIGGSAEEEAAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFISMLELFLADEKTQSIVMIGEIGGSAEEEAAQFLADEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPAR+GR+LVE+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPARLGRTLVEVLK 293 >gi|83647428|ref|YP_435863.1| succinyl-CoA synthetase subunit alpha [Hahella chejuensis KCTC 2396] gi|83635471|gb|ABC31438.1| Succinyl-CoA synthetase, alpha subunit [Hahella chejuensis KCTC 2396] Length = 291 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A ASVIYVP D+I+E+ A I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKEAVEQTGAEASVIYVPAPFCKDSILEAANAGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDFGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGG+AEEEAA+F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFQKDAQTEAIVMIGEIGGTAEEEAAEFIKNNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A +K A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAAEKFAALEQAGVKTVRSLADIGKALAEVTG 289 >gi|52080212|ref|YP_079003.1| succinyl-CoA synthetase subunit alpha [Bacillus licheniformis ATCC 14580] gi|52785589|ref|YP_091418.1| succinyl-CoA synthetase subunit alpha [Bacillus licheniformis ATCC 14580] gi|319646009|ref|ZP_08000239.1| succinyl-CoA ligase subunit alpha [Bacillus sp. BT1B_CT2] gi|52003423|gb|AAU23365.1| succinyl-CoA synthetase (alpha subunit) [Bacillus licheniformis ATCC 14580] gi|52348091|gb|AAU40725.1| SucD [Bacillus licheniformis ATCC 14580] gi|317391759|gb|EFV72556.1| succinyl-CoA ligase subunit alpha [Bacillus sp. BT1B_CT2] Length = 300 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 174/299 (58%), Positives = 228/299 (76%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+TKV+VQG+TG FHT+Q + Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVFINKDTKVIVQGITGSTALFHTKQMLEY-GTKIVGGVTPGKGGTEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T ANASVIYVP + A DAI+E+ +AE+ L++CITE IPVLDMV+VK +E Sbjct: 56 TVEEAVKQTGANASVIYVPAAFAADAIMEATDAELDLVICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S+ G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGVGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPDTHAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ GKTAPPG+ MGHAGA+ISGGKG A++KI M GI +A +P+ +G +L+++L Sbjct: 232 GFIGGKTAPPGKRMGHAGAIISGGKGTADEKIKTMNACGIEVAETPSVMGETLIKVLKE 290 >gi|170726193|ref|YP_001760219.1| succinyl-CoA synthetase subunit alpha [Shewanella woodyi ATCC 51908] gi|169811540|gb|ACA86124.1| succinyl-CoA synthetase, alpha subunit [Shewanella woodyi ATCC 51908] Length = 290 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 176/298 (59%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG +N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIDY-GTQMVGGVSPGKGGQVH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP DAI E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVAETGATASVIYVPAPFCKDAIFEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPLTEAIVMIGEIGGTAEEEAADYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKALRTKTG 289 >gi|319776561|ref|YP_004139049.1| succinyl-CoA synthetase subunit alpha [Haemophilus influenzae F3047] gi|317451152|emb|CBY87385.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae F3047] Length = 293 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 183/299 (61%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP S DAIIE+I+A LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPASFCKDAIIEAIDAGTQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|323947007|gb|EGB43021.1| succinate-CoA ligase [Escherichia coli H120] Length = 289 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T +++PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTH----LSLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 289 >gi|157961615|ref|YP_001501649.1| succinyl-CoA synthetase subunit alpha [Shewanella pealeana ATCC 700345] gi|157846615|gb|ABV87114.1| succinyl-CoA synthetase, alpha subunit [Shewanella pealeana ATCC 700345] Length = 290 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 176/298 (59%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVSPGKGGQIHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVEVTGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPLTEAIVMIGEIGGTAEEEAAEYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKALRTKTG 289 >gi|163941573|ref|YP_001646457.1| succinyl-CoA synthetase subunit alpha [Bacillus weihenstephanensis KBAB4] gi|229013018|ref|ZP_04170183.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus mycoides DSM 2048] gi|229134643|ref|ZP_04263452.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BDRD-ST196] gi|163863770|gb|ABY44829.1| succinyl-CoA synthetase, alpha subunit [Bacillus weihenstephanensis KBAB4] gi|228648689|gb|EEL04715.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus cereus BDRD-ST196] gi|228748272|gb|EEL98132.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus mycoides DSM 2048] Length = 300 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 177/299 (59%), Positives = 230/299 (76%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGLFHTKQMIEY-GTKIVGGVTPGKGGTDIEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASV+YVPP+ A DAI+E+++A++ L+VCITEGIPVLDMV VK + Sbjct: 56 TVEDAVKATGANASVVYVPPAFAADAIMEAVDAKVDLVVCITEGIPVLDMVNVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +QEG+GQSTA Sbjct: 116 HTRLLGPNCPGVITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA++++ KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWVQANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPEGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVLKE 290 >gi|68249743|ref|YP_248855.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae 86-028NP] gi|68057942|gb|AAX88195.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae 86-028NP] Length = 293 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 183/299 (61%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG G FH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGAFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP S DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPIPGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|325498097|gb|EGC95956.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Escherichia fergusonii ECD227] Length = 289 Score = 325 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLAVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 289 >gi|260767660|ref|ZP_05876595.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio furnissii CIP 102972] gi|260617169|gb|EEX42353.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio furnissii CIP 102972] gi|315179508|gb|ADT86422.1| succinyl-CoA synthetase subunit alpha [Vibrio furnissii NCTC 11218] Length = 290 Score = 325 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 178/298 (59%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIQLIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A++ AG+ S A IG +L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALESAGVKTVKSLAEIGSALREVTG 289 >gi|157803808|ref|YP_001492357.1| succinyl-CoA synthetase subunit alpha [Rickettsia canadensis str. McKiel] gi|157785071|gb|ABV73572.1| succinyl-CoA synthetase alpha subunit [Rickettsia canadensis str. McKiel] Length = 292 Score = 325 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 183/299 (61%), Positives = 232/299 (77%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K TKV+ QG TG GTFH+EQAI Y T +VGG+ P KG +++PV+ Sbjct: 1 MSILINKKTKVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGDTH----LDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+AEI ++VCITEGIPVLDMV+VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMVKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGYIHQRGIVGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +E+FL D+ T++I+M+GEIGG+AEE+A+ F+K KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDASDFIKQSKI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPG+ MGHAGA+I+GGKG AEDK+ A++ AGI I PA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIAGGKGSAEDKLEALQSAGITITRCPADIGKTMLDLLNK 291 >gi|294085400|ref|YP_003552160.1| succinyl-CoA synthetase subunit alpha [Candidatus Puniceispirillum marinum IMCC1322] gi|292664975|gb|ADE40076.1| succinyl-CoA synthetase, alpha subunit [Candidatus Puniceispirillum marinum IMCC1322] Length = 313 Score = 325 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 187/299 (62%), Positives = 231/299 (77%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+T+V+ QG TG GTFH+EQAI Y T++VGG+ P KG +++PVF Sbjct: 20 MSVLVNKDTRVICQGFTGAQGTFHSEQAIAY-GTKMVGGVTPGKGGQTH----LDLPVFN 74 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA T ANASVIYVPP A D+I+E+I+A +PLIVCITEGIPVLDMV+VK L+ S Sbjct: 75 SVVEAMRETEANASVIYVPPPFAADSIMEAIDAGMPLIVCITEGIPVLDMVKVKRALDAS 134 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 135 KSRLIGPNCPGIITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVAQTTAAGLGQSTC 194 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID LE+FLAD+ TE+IVM+GEIGGSAEE+AA + + +KPI Sbjct: 195 VGIGGDPVNGTNFIDCLEMFLADDQTEAIVMIGEIGGSAEEDAAAY---YMAQPNRKPIA 251 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA++SGG G A DKI AM+ AG +A SPA +G +++ +G+ Sbjct: 252 GFIAGQTAPPGRRMGHAGAIVSGGSGAAVDKIAAMETAGFVMASSPAALGDAVMTAIGN 310 >gi|254786518|ref|YP_003073947.1| succinyl-CoA ligase, subunit alpha [Teredinibacter turnerae T7901] gi|237685623|gb|ACR12887.1| succinyl-CoA ligase, alpha subunit [Teredinibacter turnerae T7901] Length = 290 Score = 325 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 168/298 (56%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K TKVL QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLINKETKVLCQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA T A+ASVIYVP D+I+E+ + + L+VCITEGIP +DM+ K + ++ Sbjct: 56 TMAEAVAETGADASVIYVPAPFCKDSILEAAHSGVKLVVCITEGIPTMDMLDCKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG +L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLANIGDALKEVTG 289 >gi|311030143|ref|ZP_07708233.1| succinyl-CoA synthetase subunit alpha [Bacillus sp. m3-13] Length = 300 Score = 325 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 176/299 (58%), Positives = 228/299 (76%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+TKV+VQG+TG FHT+Q + Y TQ+VGG+ P KG T G VPVF Sbjct: 1 MSVFINKDTKVIVQGITGSTALFHTKQMLEY-GTQIVGGVTPGKGGTEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T ANASVIYVP A DAI+E+++AE+ L +CITE IPVLDMV+VK +E Sbjct: 56 TVEEAVKATGANASVIYVPAPFAADAIMEAVDAELDLAICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CKIGIMPG I KG VG++SRSGTLTYEAV Q SQEG+GQSTA Sbjct: 116 KTRLVGPNCPGVITPGECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLSQEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FIDVL+ F DE T +++M+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPVNGTDFIDVLKAFNEDEDTFAVIMIGEIGGTAEEEAALWVKENM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI M E GI +A +P+ +G +L++++ Sbjct: 232 GFIGGRTAPPGKRMGHAGAIISGGKGTADEKIRVMNECGIEVADTPSVMGETLIKVIKE 290 >gi|293397231|ref|ZP_06641504.1| succinyl-CoA synthetase subunit alpha [Serratia odorifera DSM 4582] gi|291420251|gb|EFE93507.1| succinyl-CoA synthetase subunit alpha [Serratia odorifera DSM 4582] Length = 290 Score = 325 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 174/299 (58%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVETTGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVLNR 290 >gi|15892521|ref|NP_360235.1| succinyl-CoA synthetase subunit alpha [Rickettsia conorii str. Malish 7] gi|81528265|sp|Q92I22|SUCD_RICCN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|15619681|gb|AAL03136.1| succinyl-CoA synthetase alpha chain [Rickettsia conorii str. Malish 7] Length = 292 Score = 325 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 178/299 (59%), Positives = 232/299 (77%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K T+V+ QG TG GTFH+EQAI Y T +VGG+ P KG +++PV+ Sbjct: 1 MAILINKKTQVICQGFTGLQGTFHSEQAIAY-GTNMVGGVTPGKGGHTH----LDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+AEI ++VCITEGIPVLDMV+VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMVKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT F+D +E+FL D+ T++I+M+GEIGG+AEE+AA+F+K KKPIV Sbjct: 176 IGIGGDPVNGTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDAAEFIKQSKI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPG+ MGHAGA+I G G AEDK+ A++ AG+ I SPA IG+++++LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIVGRTGSAEDKLEALQSAGVIITRSPADIGKTMLDLLNK 291 >gi|27375564|ref|NP_767093.1| succinyl-CoA synthetase subunit alpha [Bradyrhizobium japonicum USDA 110] gi|27348701|dbj|BAC45718.1| succinyl-CoA synthetase alpha chain [Bradyrhizobium japonicum USDA 110] Length = 294 Score = 325 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 217/298 (72%), Positives = 249/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TGK GTFH+E AI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A+E+T A+ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPV+DMVRVK L S Sbjct: 56 TVRDAREKTGADASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVIDMVRVKRSLAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ GSVGI+SRSGTLTYEAVFQTSQEGLGQ+TA Sbjct: 116 KSRLIGPNCPGVMTAGECKIGIMPANIFKTGSVGIVSRSGTLTYEAVFQTSQEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+ LAD TESI+M+GEIGGSAEE+AAQFLKDEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMLLADPKTESIIMIGEIGGSAEEDAAQFLKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAPPGR MGHAGA+ISGGKG A K +AMK AGI ++PSPAR+G +L E L Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAGSKTDAMKSAGITVSPSPARLGHTLAEKLK 293 >gi|86747405|ref|YP_483901.1| succinyl-CoA synthetase, alpha subunit [Rhodopseudomonas palustris HaA2] gi|86570433|gb|ABD04990.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodopseudomonas palustris HaA2] Length = 294 Score = 325 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 216/299 (72%), Positives = 249/299 (83%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NTKV+ QG TGK GTFH+E A+ Y T++VGG P KG T G +PVF Sbjct: 1 MSILIDANTKVICQGFTGKNGTFHSEAAVAY-GTKMVGGTSPGKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+++T A+ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVREARDKTGADASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRSLVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+ EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVMTAGECKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTSEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD+ TESI+M+GEIGGSAEEEAAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADDKTESIIMIGEIGGSAEEEAAQFLIDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++L E L S Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAASKTAAMEAAGITVSPSPARLGKTLAEKLKS 294 >gi|254713658|ref|ZP_05175469.1| succinyl-CoA synthetase subunit alpha [Brucella ceti M644/93/1] gi|254715988|ref|ZP_05177799.1| succinyl-CoA synthetase subunit alpha [Brucella ceti M13/05/1] gi|261217754|ref|ZP_05932035.1| succinyl-CoA synthetase subunit alpha [Brucella ceti M13/05/1] gi|261321398|ref|ZP_05960595.1| succinyl-CoA synthetase subunit alpha [Brucella ceti M644/93/1] gi|260922843|gb|EEX89411.1| succinyl-CoA synthetase subunit alpha [Brucella ceti M13/05/1] gi|261294088|gb|EEX97584.1| succinyl-CoA synthetase subunit alpha [Brucella ceti M644/93/1] Length = 300 Score = 325 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 235/299 (78%), Positives = 269/299 (89%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGSKGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KERT A+ASVIYVPP+GA DAIIE+IEAEI IVCITEGIPV+DMVRVK RLE+ Sbjct: 61 ATVAEGKERTGADASVIYVPPAGAADAIIEAIEAEIGFIVCITEGIPVMDMVRVKERLER 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGD VKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDSVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G++LVE+L Sbjct: 241 VGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVLK 299 >gi|56964045|ref|YP_175776.1| succinyl-CoA synthetase subunit alpha [Bacillus clausii KSM-K16] gi|56910288|dbj|BAD64815.1| succinyl-CoA synthetase alpha subunit [Bacillus clausii KSM-K16] Length = 304 Score = 325 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 179/299 (59%), Positives = 230/299 (76%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+VQG+TG G FHT+QA+ Y T +VGG+ P KG T G VPVF Sbjct: 1 MSILINKDTKVIVQGITGATGLFHTKQALEY-GTNIVGGVTPGKGGTDIEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T ANASVIYVPP+ A DAI+E+ +AE+ L++CITEGIPVLDMV+VK + Sbjct: 56 TVQEAVEATGANASVIYVPPAFAADAIMEATDAELELVICITEGIPVLDMVKVKRYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP+ CKIGIMPG I +KG +G++SRSGTLTYEAV Q S G+GQSTA Sbjct: 116 QTRLVGPNCPGVITPEECKIGIMPGYIHKKGHIGVVSRSGTLTYEAVHQLSTAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FIDVL LF D T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTDFIDVLSLFNEDPDTYAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI M+ GI +A +P+ +G +L+E L + Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKTMEACGIRVAATPSDMGETLIEALKA 290 >gi|270263775|ref|ZP_06192044.1| hypothetical protein SOD_e04050 [Serratia odorifera 4Rx13] gi|270042659|gb|EFA15754.1| hypothetical protein SOD_e04050 [Serratia odorifera 4Rx13] Length = 290 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 174/299 (58%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTQHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDTGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEAVKAVLNR 290 >gi|260831053|ref|XP_002610474.1| hypothetical protein BRAFLDRAFT_124275 [Branchiostoma floridae] gi|229295840|gb|EEN66484.1| hypothetical protein BRAFLDRAFT_124275 [Branchiostoma floridae] Length = 323 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 178/300 (59%), Positives = 228/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I + K+TKV+ QG TGK GTFH++Q+I Y +Q+VGG+ P KG G +PVF + Sbjct: 27 NIAIGKDTKVICQGFTGKQGTFHSQQSIEY-GSQMVGGVSPGKGGKTHLG----LPVFNS 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAKE T A ASVIYVPP AG AI+E+I AE+ L+VCITEGIP DMV+VK RL + Sbjct: 82 VAEAKEATGAVASVIYVPPPFAGKAILEAINAEMSLVVCITEGIPQQDMVKVKHRLVRQD 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G++GI+SRSGTLTYEAV QT++ GLGQ+ Sbjct: 142 KTRLIGPNCPGIIKPGECKIGIMPGHIHQPGNIGIVSRSGTLTYEAVHQTTRAGLGQTLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT F+D LE+FL D AT+ IVM+GEIGGS EE AA++LK+ KKP+V Sbjct: 202 IGIGGDPFNGTNFVDCLEVFLGDPATKGIVMIGEIGGSMEESAAEYLKEHNTGPNKKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPGR MGHAGA+ISGGKG A+DKI A++EAG+ + SPA++G ++++ + L Sbjct: 262 SFIAGVTAPPGRRMGHAGAIISGGKGAAQDKIQALQEAGVEVTMSPAQMGTTMLQEMQKL 321 >gi|147673983|ref|YP_001217609.1| succinyl-CoA synthetase subunit alpha [Vibrio cholerae O395] gi|262167703|ref|ZP_06035406.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae RC27] gi|146315866|gb|ABQ20405.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae O395] gi|227013981|gb|ACP10191.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae O395] gi|262023908|gb|EEY42606.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae RC27] Length = 290 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 181/298 (60%), Positives = 224/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAITY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTTDMIDVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D ATE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPATEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AE+K A++ AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAALESAGVKTVKSLADIGKALREVTG 289 >gi|282891424|ref|ZP_06299923.1| hypothetical protein pah_c161o041 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498709|gb|EFB41029.1| hypothetical protein pah_c161o041 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 292 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 173/300 (57%), Positives = 226/300 (75%), Gaps = 10/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV++ TKV+ QG+TGKAG FHTEQ + Y + VGG+ P KG G +PVF Sbjct: 1 MSILVNRKTKVITQGITGKAGNFHTEQCLQY-GSHFVGGVTPGKGGQETLG----LPVFE 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK+ T +AS+I+VPP A DAI+E+ +A IPLI+CITEGIP+ DM+ V + + S Sbjct: 56 TVYEAKKATQCDASMIFVPPPFAADAILEAEDAGIPLIICITEGIPIRDMLEVSSVMRTS 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + RLIGPNCPGI+TP+ CKIGIMPG I RKG++GI+SRSGTLTYEAV+QT+Q GLGQS+ Sbjct: 116 KTSRLIGPNCPGIITPEECKIGIMPGYIHRKGNIGIVSRSGTLTYEAVWQTTQLGLGQSS 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT FID+LELF D T +I+++GEIGG AEE+AA+++K+ KP+ Sbjct: 176 CVGIGGDPLNGTNFIDILELFEKDSETNAILLIGEIGGEAEEQAAEWIKEHC----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG APPGR MGHAGA++SGGKG A+ KI A+K+AG+ + SPA +G ++ + L S Sbjct: 232 AAFIAGTMAPPGRRMGHAGAIVSGGKGTAQGKIEALKKAGVHVTTSPAEMGSTIHKALRS 291 >gi|329124072|ref|ZP_08252619.1| succinyl-CoA synthetase subunit alpha [Haemophilus aegyptius ATCC 11116] gi|327467497|gb|EGF12995.1| succinyl-CoA synthetase subunit alpha [Haemophilus aegyptius ATCC 11116] Length = 293 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 183/299 (61%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP S DAIIE+I+A LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPASFCKDAIIEAIDAGTQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|119945909|ref|YP_943589.1| succinyl-CoA synthetase, alpha subunit [Psychromonas ingrahamii 37] gi|119864513|gb|ABM03990.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Psychromonas ingrahamii 37] Length = 290 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 177/298 (59%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQALEY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A ASVIYVP DAI+E+I+A I LIV ITEGIP LD+V VK +L+++ Sbjct: 56 TVREAVEKTGATASVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTLDLVSVKVKLDQA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMPG I KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPGHIHLKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSSFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A+DK A+++AG+ S A+IG++L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTADDKFKALEDAGVKTTKSLAQIGQALREVTG 289 >gi|300926131|ref|ZP_07141944.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 182-1] gi|300417830|gb|EFK01141.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 182-1] Length = 289 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGTTASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 289 >gi|320539329|ref|ZP_08038998.1| putative succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Serratia symbiotica str. Tucson] gi|320030454|gb|EFW12464.1| putative succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Serratia symbiotica str. Tucson] Length = 290 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 177/299 (59%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTQHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T ANASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGANASVIYVPALFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHQPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPILGSNFIDILKLFQQDPQTEAIVMIGEIGGSAEEEAAAYIKEYV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVLNR 290 >gi|262375859|ref|ZP_06069091.1| succinyl-CoA synthetase subunit alpha [Acinetobacter lwoffii SH145] gi|262309462|gb|EEY90593.1| succinyl-CoA synthetase subunit alpha [Acinetobacter lwoffii SH145] Length = 296 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 167/301 (55%), Positives = 222/301 (73%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG + +PVF Sbjct: 1 MSVLVNKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQTH----LELPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA + T A+ASVIYVP D+I+E++++ I LIV ITEG+P +DM++ K LE Sbjct: 56 TMREAVKETGADASVIYVPAPFVLDSIVEAVDSGIELIVVITEGVPTIDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RLIGPNCPGI+TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLIGPNCPGIITPGECKIGIMPGHIHQPGKIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D TE+I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDCLKLFQEDPQTEAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A + AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFERAGMAYTRSPAELGSTMLQVLK 291 Query: 299 S 299 Sbjct: 292 D 292 >gi|149911918|ref|ZP_01900517.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Moritella sp. PE36] gi|149805011|gb|EDM65039.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Moritella sp. PE36] Length = 289 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQA Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAADY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+A I LIVCITEGIP +DM+ VK +L++ Sbjct: 56 TVRDAVETTGATASVIYVPAPFCKDAILEAIDAGIELIVCITEGIPTVDMIEVKVKLDQQ 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + R+IGPNCPG++TP KIGIMPG I + G +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 NVRMIGPNCPGVITPGESKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTDEGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FID+LELF D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDILELFENDPQTEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A+++AG+ S A IG +L LG Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTADEKFAALEDAGVSTVRSLADIGSALRAKLG 289 >gi|262276211|ref|ZP_06054020.1| succinyl-CoA ligase [ADP-forming] alpha chain [Grimontia hollisae CIP 101886] gi|262220019|gb|EEY71335.1| succinyl-CoA ligase [ADP-forming] alpha chain [Grimontia hollisae CIP 101886] Length = 290 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 177/294 (60%), Positives = 221/294 (75%), Gaps = 9/294 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIEY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP LDM+ VK +L+++ Sbjct: 56 TVAEAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTLDMLEVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGG+AEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFEEDPQTEAIVMIGEIGGTAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVTTVKSLADIGKALR 285 >gi|237730692|ref|ZP_04561173.1| succinyl-CoA synthetase subunit alpha [Citrobacter sp. 30_2] gi|226906231|gb|EEH92149.1| succinyl-CoA synthetase subunit alpha [Citrobacter sp. 30_2] Length = 289 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVIK 289 >gi|145631247|ref|ZP_01787020.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae R3021] gi|144983174|gb|EDJ90669.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae R3021] Length = 293 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 183/299 (61%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E A A+VIYVP S DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENMGATATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPIPGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|165918999|ref|ZP_02219085.1| succinate-CoA ligase (ADP-forming), alpha subunit [Coxiella burnetii RSA 334] gi|165917324|gb|EDR35928.1| succinate-CoA ligase (ADP-forming), alpha subunit [Coxiella burnetii RSA 334] Length = 294 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 224/299 (74%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK T+VL QG TGK GTFH+EQAI Y TQ+VGG+ P KG G +P+F Sbjct: 1 MSILIDKETRVLCQGFTGKQGTFHSEQAIEY-GTQMVGGVTPGKGGQSHLG----LPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E T+A+A++I+VP D+I E+++A + L+VCITEGIPVLDM+ VKA L + Sbjct: 56 SVHEAVEETSADATMIFVPAPFCKDSISEAVDAGVRLVVCITEGIPVLDMLEVKAYLRQH 115 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPNCPG++TP CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q G GQST Sbjct: 116 PDVRMIGPNCPGVITPGECKIGIMPGHIHQRGKVGIVSRSGTLTYEAVNQTTQMGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT FIDVLE+F D T++IVMVGEIGG+AEEEAA+F++ KKP+ Sbjct: 176 CVGIGGDPIPGTSFIDVLEMFEKDSQTQAIVMVGEIGGTAEEEAAEFIQSNV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + ++AG TAPPG+ MGHAGA+I+GGKG A DK A++ AG+ + SPA IG+ + E G Sbjct: 232 ISYIAGVTAPPGKRMGHAGAIIAGGKGTAADKYAALEAAGVFVVKSPAEIGKGVAEATG 290 >gi|225628125|ref|ZP_03786160.1| succinyl-CoA synthetase, alpha subunit [Brucella ceti str. Cudo] gi|260169351|ref|ZP_05756162.1| succinyl-CoA synthetase subunit alpha [Brucella sp. F5/99] gi|261758867|ref|ZP_06002576.1| succinyl-CoA ligase [Brucella sp. F5/99] gi|225616950|gb|EEH13997.1| succinyl-CoA synthetase, alpha subunit [Brucella ceti str. Cudo] gi|261738851|gb|EEY26847.1| succinyl-CoA ligase [Brucella sp. F5/99] Length = 300 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 235/299 (78%), Positives = 269/299 (89%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGSKGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KERT A+ASVIYVP +GA DAIIE+IEAEI IVCITEGIPV+DMVRVK RLE+ Sbjct: 61 ATVAEGKERTGADASVIYVPLAGAADAIIEAIEAEIGFIVCITEGIPVMDMVRVKERLER 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G++LVE+L Sbjct: 241 VGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVLK 299 >gi|319897337|ref|YP_004135533.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae F3031] gi|317432842|emb|CBY81207.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae F3031] Length = 293 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 183/299 (61%), Positives = 221/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAIENTGATATVIYVPAPFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVGKIAALEAAGVTCVKSLAEIGEALRKLLKS 290 >gi|62290779|ref|YP_222572.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 1 str. 9-941] gi|82700690|ref|YP_415264.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis biovar Abortus 2308] gi|189024994|ref|YP_001935762.1| succinyl-CoA synthetase subunit alpha [Brucella abortus S19] gi|237816287|ref|ZP_04595280.1| succinyl-CoA synthetase, alpha subunit [Brucella abortus str. 2308 A] gi|254690068|ref|ZP_05153322.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 6 str. 870] gi|254694556|ref|ZP_05156384.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 3 str. Tulya] gi|254696181|ref|ZP_05158009.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 2 str. 86/8/59] gi|254731099|ref|ZP_05189677.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 4 str. 292] gi|256258321|ref|ZP_05463857.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 9 str. C68] gi|260546045|ref|ZP_05821785.1| succinyl-CoA ligase [Brucella abortus NCTC 8038] gi|260755604|ref|ZP_05867952.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 6 str. 870] gi|260758829|ref|ZP_05871177.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 4 str. 292] gi|260760553|ref|ZP_05872896.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 2 str. 86/8/59] gi|260884630|ref|ZP_05896244.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 9 str. C68] gi|261214878|ref|ZP_05929159.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 3 str. Tulya] gi|297247166|ref|ZP_06930884.1| succinyl-CoA ligase subunit alpha [Brucella abortus bv. 5 str. B3196] gi|62196911|gb|AAX75211.1| SucD, succinyl-CoA synthetase, alpha subunit [Brucella abortus bv. 1 str. 9-941] gi|82616791|emb|CAJ11881.1| CoA Binding Domain:Succinyl-CoA ligase, alpha subunit:ATP-citrate lyase/succinyl-CoA ligase [Brucella melitensis biovar Abortus 2308] gi|189020566|gb|ACD73288.1| Succinyl-CoA ligase [Brucella abortus S19] gi|237788354|gb|EEP62569.1| succinyl-CoA synthetase, alpha subunit [Brucella abortus str. 2308 A] gi|260096152|gb|EEW80028.1| succinyl-CoA ligase [Brucella abortus NCTC 8038] gi|260669147|gb|EEX56087.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 4 str. 292] gi|260670985|gb|EEX57806.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 2 str. 86/8/59] gi|260675712|gb|EEX62533.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 6 str. 870] gi|260874158|gb|EEX81227.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 9 str. C68] gi|260916485|gb|EEX83346.1| succinyl-CoA synthetase subunit alpha [Brucella abortus bv. 3 str. Tulya] gi|297174335|gb|EFH33682.1| succinyl-CoA ligase subunit alpha [Brucella abortus bv. 5 str. B3196] Length = 300 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 235/299 (78%), Positives = 269/299 (89%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGSKGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KERT A+ASVIYVPP+GA DAIIE+IEAEI IVCITEGIPV+DMVRVK RLE+ Sbjct: 61 ATVAEGKERTGADASVIYVPPAGAADAIIEAIEAEIGFIVCITEGIPVMDMVRVKERLER 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TA GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G++LVE+L Sbjct: 241 VGFIAGRTALAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVLK 299 >gi|15642084|ref|NP_231716.1| succinyl-CoA synthetase subunit alpha [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586942|ref|ZP_01676722.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae 2740-80] gi|121727400|ref|ZP_01680539.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae V52] gi|153213721|ref|ZP_01948973.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae 1587] gi|153818378|ref|ZP_01971045.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae NCTC 8457] gi|153821693|ref|ZP_01974360.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae B33] gi|153826097|ref|ZP_01978764.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae MZO-2] gi|153828884|ref|ZP_01981551.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae 623-39] gi|227082210|ref|YP_002810761.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae M66-2] gi|229507827|ref|ZP_04397332.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae BX 330286] gi|229511936|ref|ZP_04401415.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae B33] gi|229513739|ref|ZP_04403201.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae TMA 21] gi|229519072|ref|ZP_04408515.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae RC9] gi|229522041|ref|ZP_04411458.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae TM 11079-80] gi|229528900|ref|ZP_04418290.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae 12129(1)] gi|229607372|ref|YP_002878020.1| succinyl-CoA synthetase subunit alpha [Vibrio cholerae MJ-1236] gi|254226087|ref|ZP_04919685.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae V51] gi|254286799|ref|ZP_04961752.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae AM-19226] gi|254849170|ref|ZP_05238520.1| succinyl-CoA synthase [Vibrio cholerae MO10] gi|255745173|ref|ZP_05419122.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholera CIRS 101] gi|258621149|ref|ZP_05716183.1| succinyl-CoA synthetase alpha subunit [Vibrio mimicus VM573] gi|261210013|ref|ZP_05924312.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio sp. RC341] gi|262155969|ref|ZP_06029090.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae INDRE 91/1] gi|262166194|ref|ZP_06033931.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio mimicus VM223] gi|262191356|ref|ZP_06049547.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae CT 5369-93] gi|262404434|ref|ZP_06080989.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio sp. RC586] gi|297579588|ref|ZP_06941516.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae RC385] gi|298497890|ref|ZP_07007697.1| succinyl-CoA synthetase subunit alpha [Vibrio cholerae MAK 757] gi|9656632|gb|AAF95230.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548878|gb|EAX58921.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae 2740-80] gi|121630292|gb|EAX62690.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae V52] gi|124115782|gb|EAY34602.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae 1587] gi|125621399|gb|EAZ49735.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae V51] gi|126511068|gb|EAZ73662.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae NCTC 8457] gi|126520791|gb|EAZ78014.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae B33] gi|148875590|gb|EDL73725.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae 623-39] gi|149740214|gb|EDM54367.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae MZO-2] gi|150423090|gb|EDN15038.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae AM-19226] gi|227010098|gb|ACP06310.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae M66-2] gi|229332674|gb|EEN98160.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae 12129(1)] gi|229340966|gb|EEO05971.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae TM 11079-80] gi|229343761|gb|EEO08736.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae RC9] gi|229348920|gb|EEO13877.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae TMA 21] gi|229351901|gb|EEO16842.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae B33] gi|229355332|gb|EEO20253.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae BX 330286] gi|229370027|gb|ACQ60450.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae MJ-1236] gi|254844875|gb|EET23289.1| succinyl-CoA synthase [Vibrio cholerae MO10] gi|255737003|gb|EET92399.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholera CIRS 101] gi|258586537|gb|EEW11252.1| succinyl-CoA synthetase alpha subunit [Vibrio mimicus VM573] gi|260840959|gb|EEX67496.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio sp. RC341] gi|262025910|gb|EEY44578.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio mimicus VM223] gi|262030280|gb|EEY48923.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae INDRE 91/1] gi|262032775|gb|EEY51322.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae CT 5369-93] gi|262349466|gb|EEY98604.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio sp. RC586] gi|297537182|gb|EFH76015.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae RC385] gi|297542223|gb|EFH78273.1| succinyl-CoA synthetase subunit alpha [Vibrio cholerae MAK 757] gi|327484616|gb|AEA79023.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae LMA3894-4] Length = 290 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 181/298 (60%), Positives = 224/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTTDMIDVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D ATE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPATEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AE+K A++ AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAALESAGVKTVKSLADIGKALREVTG 289 >gi|258626224|ref|ZP_05721072.1| succinyl-CoA synthetase alpha subunit [Vibrio mimicus VM603] gi|262170926|ref|ZP_06038604.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio mimicus MB-451] gi|258581579|gb|EEW06480.1| succinyl-CoA synthetase alpha subunit [Vibrio mimicus VM603] gi|261892002|gb|EEY37988.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio mimicus MB-451] Length = 290 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 180/298 (60%), Positives = 224/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTTDMIDVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D ATE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPATEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A++ AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALESAGVKTVKSLADIGKALREVTG 289 >gi|261343501|ref|ZP_05971146.1| succinyl-CoA synthetase subunit alpha [Providencia rustigianii DSM 4541] gi|282568647|gb|EFB74182.1| succinyl-CoA synthetase subunit alpha [Providencia rustigianii DSM 4541] Length = 290 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 173/299 (57%), Positives = 219/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGQCKIGIQPGHIHMPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEE+AA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGNAEEDAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ LL Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKSLLNK 290 >gi|126174725|ref|YP_001050874.1| succinyl-CoA synthetase subunit alpha [Shewanella baltica OS155] gi|153001024|ref|YP_001366705.1| succinyl-CoA synthetase subunit alpha [Shewanella baltica OS185] gi|160875737|ref|YP_001555053.1| succinyl-CoA synthetase subunit alpha [Shewanella baltica OS195] gi|217973016|ref|YP_002357767.1| succinyl-CoA synthetase subunit alpha [Shewanella baltica OS223] gi|304409102|ref|ZP_07390723.1| succinyl-CoA synthetase, alpha subunit [Shewanella baltica OS183] gi|307303105|ref|ZP_07582860.1| succinyl-CoA synthetase, alpha subunit [Shewanella baltica BA175] gi|125997930|gb|ABN62005.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella baltica OS155] gi|151365642|gb|ABS08642.1| succinyl-CoA synthetase, alpha subunit [Shewanella baltica OS185] gi|160861259|gb|ABX49793.1| succinyl-CoA synthetase, alpha subunit [Shewanella baltica OS195] gi|217498151|gb|ACK46344.1| succinyl-CoA synthetase, alpha subunit [Shewanella baltica OS223] gi|304352923|gb|EFM17320.1| succinyl-CoA synthetase, alpha subunit [Shewanella baltica OS183] gi|306913465|gb|EFN43887.1| succinyl-CoA synthetase, alpha subunit [Shewanella baltica BA175] gi|315267926|gb|ADT94779.1| succinyl-CoA synthetase, alpha subunit [Shewanella baltica OS678] Length = 290 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 174/294 (59%), Positives = 217/294 (73%), Gaps = 9/294 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH++QAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSQQAIDY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVAATGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEE+AA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGNAEEDAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKALR 285 >gi|4512118|gb|AAD21623.1| succinyl-CoA synthetase alpha subunit [Pseudomonas aeruginosa PAO1] Length = 295 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+ I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKEAVEATGAEASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+ F D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKRFQEDPQTEAIVMIGEIGGSAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|326794799|ref|YP_004312619.1| succinyl-CoA synthetase, subunit alpha [Marinomonas mediterranea MMB-1] gi|326545563|gb|ADZ90783.1| succinyl-CoA synthetase, alpha subunit [Marinomonas mediterranea MMB-1] Length = 290 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 211/298 (70%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+ A I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKEAVEETGAEASVIYVPAPFCKDSILEAANAGIKLIVCITEGIPTLDMLDCKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP KIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGQSKIGIMPGHIHMPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFQNDPQTEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A +K A+++AG+ S A IG L EL G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTAAEKFAALEDAGVKTVRSLADIGAGLKELTG 289 >gi|319404898|emb|CBI78499.1| succinyl-CoA synthetase, alpha chain [Bartonella rochalimae ATCC BAA-1498] Length = 300 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 235/299 (78%), Positives = 270/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSIL++K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGI+PKKG W G +P+F Sbjct: 1 MSILINKDTKVLVQGLTGKTGTFHTEQALAYHGTQMVGGINPKKGGETWKGSKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V E KE+T A+ASVIYVPP+GA DAIIE+IEAEI LIVCITEGIPV+DMV+VKA+LE+ Sbjct: 61 ASVVEGKEKTGADASVIYVPPAGAADAIIEAIEAEIGLIVCITEGIPVMDMVKVKAKLEQ 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL GPNCPGILTPD CKIGIMPGSIFRKGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLTGPNCPGILTPDECKIGIMPGSIFRKGSVGVVSRSGTLTYEAVFQTSHEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEFIDVLE+FLAD TESIVM+GEIGGSAEEEAAQFLKDEAK+GRKKP+ Sbjct: 181 AIGIGGDPVKGTEFIDVLEMFLADNETESIVMIGEIGGSAEEEAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSP++IG++LVE+L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMEAAGIRVSPSPSQIGKTLVEVLK 299 >gi|157825717|ref|YP_001493437.1| succinyl-CoA synthetase subunit alpha [Rickettsia akari str. Hartford] gi|157799675|gb|ABV74929.1| succinyl-CoA synthetase subunit alpha [Rickettsia akari str. Hartford] Length = 292 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 179/299 (59%), Positives = 234/299 (78%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K TKV+ QG TG GTFH+EQAI Y T +VGGI P KG +++PV+ Sbjct: 1 MAILINKKTKVICQGFTGSQGTFHSEQAIAY-GTNMVGGITPGKGGHTH----LDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPPS A D+I+E+I+A+I ++VCITEGIP+LDMV+VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPSFAADSILEAIDAKIEVVVCITEGIPILDMVKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +++FL D+ T++I+M+GEIGG+AEE+AA+F+K KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIDMFLKDDETKAIIMIGEIGGNAEEDAAEFIKQSKI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPG+ MGHAGA+I+GG+G AEDK+ ++ AG+ I SPA IG+++ +LL Sbjct: 233 SFIAGITAPPGKRMGHAGAIIAGGQGSAEDKLEVLQSAGVTITKSPADIGKTMFDLLNK 291 >gi|224476372|ref|YP_002633978.1| succinyl-CoA synthetase subunit alpha [Staphylococcus carnosus subsp. carnosus TM300] gi|222420979|emb|CAL27793.1| putative succinyl-CoA synthetase, alpha chain [Staphylococcus carnosus subsp. carnosus TM300] Length = 304 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 172/296 (58%), Positives = 222/296 (75%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ VDKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPVF Sbjct: 1 MSVYVDKNTKVIVQGITGSTALFHTKQMLEY-GTQIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAKE T AN SVIYVP A DAI+E +A++ L +CITE IPVLDMV+V LE Sbjct: 56 TVEEAKEETGANVSVIYVPAPFAADAILECADADLDLAICITEHIPVLDMVKVVRYLEDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPG+++PD CKIGIMPG I ++G VG++SRSGTLTYEAV Q ++EG+GQS+A Sbjct: 116 NTRLIGPNCPGVISPDDCKIGIMPGYIHKRGHVGVVSRSGTLTYEAVHQLTEEGIGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T+++VM+GEIGG+AEEEAA+++ + KP++ Sbjct: 176 VGIGGDPVNGTNFIDVLDAFNKDPETKAVVMIGEIGGTAEEEAAEWI----NKNMTKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI + E G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAKEKIKTLNENGVKTADTPSEIGSTLIEA 287 >gi|295096566|emb|CBK85656.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 289 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I R G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHRPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKSIIK 289 >gi|323158778|gb|EFZ44791.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli E128010] Length = 289 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLVDIGEALKTVLK 289 >gi|56414144|ref|YP_151219.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363066|ref|YP_002142703.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128401|gb|AAV77907.1| succinyl-CoA synthetase alpha chain [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094543|emb|CAR60063.1| succinyl-CoA synthetase alpha chain [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 289 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+V+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTRVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GG+G A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGEGTADEKFAALEAAGVKTVRSLADIGEALKAIIK 289 >gi|221134284|ref|ZP_03560589.1| succinyl-CoA synthetase, alpha subunit [Glaciecola sp. HTCC2999] Length = 290 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIEY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP + D+IIE+ +A I +IVCITEGIP +DM+ VK + + Sbjct: 56 TVKDAVAETGATASVIYVPAAFCKDSIIEAADAGIEIIVCITEGIPTVDMIYVKEYVSQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TP CKIGIMPG I + G VG++SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVTMIGPNCPGVITPGECKIGIMPGHIHKPGKVGVVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FIDVL+LF D TE+IVM+GEIGG+AEEEAA+F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDVLKLFQNDPQTEAIVMIGEIGGTAEEEAAEFIKNNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALEAAGVKTVRSLADIGKALREITG 289 >gi|17986423|ref|NP_539057.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis bv. 1 str. 16M] gi|225853363|ref|YP_002733596.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis ATCC 23457] gi|256045531|ref|ZP_05448414.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis bv. 1 str. Rev.1] gi|256112258|ref|ZP_05453179.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis bv. 3 str. Ether] gi|256263153|ref|ZP_05465685.1| succinyl-CoA ligase [Brucella melitensis bv. 2 str. 63/9] gi|260562841|ref|ZP_05833327.1| succinyl-CoA ligase [Brucella melitensis bv. 1 str. 16M] gi|265991955|ref|ZP_06104512.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis bv. 1 str. Rev.1] gi|265993687|ref|ZP_06106244.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis bv. 3 str. Ether] gi|17982017|gb|AAL51321.1| succinyl-CoA synthetase alpha chain [Brucella melitensis bv. 1 str. 16M] gi|225641728|gb|ACO01642.1| succinyl-CoA synthetase, alpha subunit [Brucella melitensis ATCC 23457] gi|260152857|gb|EEW87949.1| succinyl-CoA ligase [Brucella melitensis bv. 1 str. 16M] gi|262764668|gb|EEZ10589.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis bv. 3 str. Ether] gi|263003021|gb|EEZ15314.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis bv. 1 str. Rev.1] gi|263093058|gb|EEZ17208.1| succinyl-CoA ligase [Brucella melitensis bv. 2 str. 63/9] gi|289467877|gb|ADC95623.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis bv. 1 str. M5] gi|326409927|gb|ADZ66992.1| succinyl-CoA synthetase subunit alpha [Brucella melitensis M28] gi|326539640|gb|ADZ87855.1| succinyl-CoA synthetase, alpha subunit [Brucella melitensis M5-90] Length = 300 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 234/299 (78%), Positives = 269/299 (89%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG W G +P+F Sbjct: 1 MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGSKGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KERT A+ASVIYVPP+GA DAIIE+IEAEI IVCITEGIPV+D+VRVK RLE+ Sbjct: 61 ATVAEGKERTGADASVIYVPPAGAADAIIEAIEAEIGFIVCITEGIPVMDIVRVKERLER 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEE+AAQFLKDEAKRGRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TA GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G++LVE+L Sbjct: 241 VGFIAGRTALAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVLK 299 >gi|331656746|ref|ZP_08357708.1| succinyl-CoA synthetase subunit alpha [Escherichia coli TA206] gi|331054994|gb|EGI27003.1| succinyl-CoA synthetase subunit alpha [Escherichia coli TA206] Length = 289 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGAIASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 289 >gi|16764109|ref|NP_459724.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62179313|ref|YP_215730.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161615034|ref|YP_001588999.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167552842|ref|ZP_02346593.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167993016|ref|ZP_02574111.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230618|ref|ZP_02655676.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168238883|ref|ZP_02663941.1| succinyl-CoA ligase [ADP-forming] subunit alpha (Succinyl-CoA synthetase subunit alpha) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240591|ref|ZP_02665523.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264343|ref|ZP_02686316.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467704|ref|ZP_02701541.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820132|ref|ZP_02832132.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446366|ref|YP_002039976.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450796|ref|YP_002044769.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471718|ref|ZP_03077702.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737845|ref|YP_002113845.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251804|ref|YP_002145697.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265743|ref|ZP_03165817.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200390672|ref|ZP_03217283.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929815|ref|ZP_03220836.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|224582554|ref|YP_002636352.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911669|ref|ZP_04655506.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16419249|gb|AAL19683.1| succinyl-CoA synthetase, alpha subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62126946|gb|AAX64649.1| succinyl-CoA synthetase, alpha subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364398|gb|ABX68166.1| hypothetical protein SPAB_02794 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194405029|gb|ACF65251.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194409100|gb|ACF69319.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194458082|gb|EDX46921.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713347|gb|ACF92568.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195629158|gb|EDX48526.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197215507|gb|ACH52904.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243998|gb|EDY26618.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288326|gb|EDY27707.1| succinyl-CoA ligase [ADP-forming] subunit alpha (Succinyl-CoA synthetase subunit alpha) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199603117|gb|EDZ01663.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320809|gb|EDZ06010.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205322550|gb|EDZ10389.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328900|gb|EDZ15664.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334878|gb|EDZ21642.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339881|gb|EDZ26645.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343019|gb|EDZ29783.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347165|gb|EDZ33796.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|224467081|gb|ACN44911.1| succinyl-CoA synthetase alpha subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246002|emb|CBG23804.1| succinyl-CoA synthetase alpha chain [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992477|gb|ACY87362.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157330|emb|CBW16819.1| succinyl-CoA synthetase alpha chain [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911765|dbj|BAJ35739.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085008|emb|CBY94797.1| succinyl-CoA synthetase alpha chain [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226314|gb|EFX51365.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615828|gb|EFY12746.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621224|gb|EFY18081.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623644|gb|EFY20482.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628916|gb|EFY25696.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634896|gb|EFY31626.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636576|gb|EFY33280.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641760|gb|EFY38394.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647817|gb|EFY44297.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651853|gb|EFY48222.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652650|gb|EFY48999.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658458|gb|EFY54721.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664940|gb|EFY61131.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668391|gb|EFY64547.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670521|gb|EFY66654.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675261|gb|EFY71337.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679687|gb|EFY75728.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684837|gb|EFY80836.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322713782|gb|EFZ05353.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129049|gb|ADX16479.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323193155|gb|EFZ78374.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200606|gb|EFZ85681.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202278|gb|EFZ87326.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205455|gb|EFZ90421.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213506|gb|EFZ98299.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215340|gb|EGA00085.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221785|gb|EGA06192.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323228085|gb|EGA12221.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231009|gb|EGA15125.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234158|gb|EGA18247.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238147|gb|EGA22205.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243582|gb|EGA27600.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247394|gb|EGA31353.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251382|gb|EGA35254.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258479|gb|EGA42151.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260633|gb|EGA44242.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264705|gb|EGA48207.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270969|gb|EGA54404.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332987676|gb|AEF06659.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 289 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAIIK 289 >gi|88860192|ref|ZP_01134831.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding protein [Pseudoalteromonas tunicata D2] gi|88818186|gb|EAR28002.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding protein [Pseudoalteromonas tunicata D2] Length = 290 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 175/298 (58%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A ASVIYVP DAI+E+I+A I LIVCITEGIP LDMV VK +LE++ Sbjct: 56 TVRDAVDATGATASVIYVPAPFCKDAILEAIDAGIELIVCITEGIPTLDMVDVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP KIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGETKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVL+LF D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLKLFQEDPQTEAIVMIGEIGGTAEEEAAEYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A +K A++ AG+ S A IG++L E G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAVEKFAALEAAGVKTVRSLADIGKALKEKTG 289 >gi|148826194|ref|YP_001290947.1| succinyl-CoA synthetase subunit alpha [Haemophilus influenzae PittEE] gi|148716354|gb|ABQ98564.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae PittEE] Length = 293 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 183/299 (61%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T + A+VIYVP S DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVCEAVENTGSTATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A+ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALDAAGVTCVKSLAEIGEALRKLLKS 290 >gi|209776464|gb|ACI86544.1| succinyl-CoA synthetase alpha subunit [Escherichia coli] Length = 289 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPALFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 289 >gi|153006561|ref|YP_001380886.1| succinyl-CoA synthetase subunit alpha [Anaeromyxobacter sp. Fw109-5] gi|152030134|gb|ABS27902.1| succinyl-CoA synthetase, alpha subunit [Anaeromyxobacter sp. Fw109-5] Length = 329 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 177/300 (59%), Positives = 220/300 (73%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI VD+NTKVLVQG+TG AG+FH EQ + Y T+VV G+ P +G T + VP+F Sbjct: 1 MSIFVDRNTKVLVQGITGAAGSFHAEQMLAY-GTRVVAGVTPGRGGTRF---EQRVPIFD 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TV EA T ANASVI+VPP A DAI+E+ A +PL+V ITEGIPVLDMV VK L+ + Sbjct: 57 TVGEAVRETGANASVIFVPPPFAADAIMEAAGAGVPLVVAITEGIPVLDMVTVKRFLQDR 116 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RL+GPNCPG++TP CKIGIMPG I R G +GI+SRSGTLTYEAV Q + GLGQST Sbjct: 117 PGVRLLGPNCPGVITPGQCKIGIMPGHIHRPGPIGIVSRSGTLTYEAVKQLTDLGLGQST 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPV GT+F+D L F +D TE+IV++GEIGGS EE AA+++ + KP+ Sbjct: 177 AVGIGGDPVNGTDFVDCLSRFESDPETEAIVLIGEIGGSGEEWAARYI----GKNVTKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VGF+AG++APPGR MGHAGAVISG G AE KI A++EAG+ + SPA IG ++ +L Sbjct: 233 VGFIAGRSAPPGRRMGHAGAVISGSSGTAEAKIAALREAGVVVCESPAGIGEAVRHVLSR 292 >gi|91776240|ref|YP_545996.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methylobacillus flagellatus KT] gi|91710227|gb|ABE50155.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methylobacillus flagellatus KT] Length = 292 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 180/294 (61%), Positives = 226/294 (76%), Gaps = 9/294 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+K TKVL QG TGK GTFH+EQA+ Y TQ+VGG+ P KG +++PVF Sbjct: 1 MAILVNKQTKVLCQGFTGKQGTFHSEQALAY-GTQMVGGVTPGKGGQRH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ A T ANASVIYVPP+ A D+I+E+ +A I LIVCITEGIPVLDM+ VKA L+ + Sbjct: 56 TMRSAVRETGANASVIYVPPAFAADSILEACDAGIELIVCITEGIPVLDMLNVKAALQAN 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPGSI +G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GARLVGPNCPGVITPDECKIGIMPGSIHLRGKVGIVSRSGTLTYEAVHQTTALGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP++G FID LELF AD TE+I+MVGEIGGS EE AA+++K KP+ Sbjct: 176 VGIGGDPIRGMNFIDCLELFEADPETEAIIMVGEIGGSDEEAAAEYIKQYV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 G++AG+TAP G+ MGHAGA+ISGG G AEDKI A+++AG+ +A SPA +G ++ Sbjct: 232 GYIAGQTAPAGKRMGHAGAIISGGSGKAEDKIRALEQAGVVVASSPAGLGEAVQ 285 >gi|254475089|ref|ZP_05088475.1| succinyl-CoA ligase, alpha subunit [Ruegeria sp. R11] gi|214029332|gb|EEB70167.1| succinyl-CoA ligase, alpha subunit [Ruegeria sp. R11] Length = 294 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 198/299 (66%), Positives = 247/299 (82%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG +N+PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVKRALEDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QT+ GLGQSTA Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTADIGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVL++FL D TESI+M+GEIGGSAEEEAA+FL ++ K+GR KP+ Sbjct: 176 VGIGGDPIKGTEHIDVLDMFLDDPETESIIMIGEIGGSAEEEAAEFLAEQKKKGRWKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AMK AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIVVADSPATLGEAVLKAIGK 294 >gi|205352003|ref|YP_002225804.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205271784|emb|CAR36618.1| succinyl-CoA synthetase alpha chain [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627043|gb|EGE33386.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 289 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQ I Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQEIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAIIK 289 >gi|145641203|ref|ZP_01796783.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae R3021] gi|145274040|gb|EDK13906.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae 22.4-21] Length = 293 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 182/299 (60%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGSSHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP S D IIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPASFCKDVIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L +LL S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVICVKSLAEIGEALRKLLKS 290 >gi|296103342|ref|YP_003613488.1| succinyl-CoA synthetase alpha subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057801|gb|ADF62539.1| succinyl-CoA synthetase alpha subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 289 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKSIIK 289 >gi|153835347|ref|ZP_01988014.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Vibrio harveyi HY01] gi|148868138|gb|EDL67297.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Vibrio harveyi HY01] Length = 290 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTTDMIDVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDSETEAIVMIGEIGGTAEEEAAAYIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG+ L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLAEIGKGLREVTG 289 >gi|16078673|ref|NP_389492.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. subtilis str. 168] gi|221309485|ref|ZP_03591332.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. subtilis str. 168] gi|221313810|ref|ZP_03595615.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318734|ref|ZP_03600028.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. subtilis str. JH642] gi|221323005|ref|ZP_03604299.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. subtilis str. SMY] gi|321315376|ref|YP_004207663.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis BSn5] gi|3915596|sp|P80865|SUCD_BACSU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; AltName: Full=Vegetative protein 239; Short=VEG239 gi|2462968|emb|CAA04420.1| putative succinyl-coA synthetase alpha chain [Bacillus subtilis subsp. subtilis str. 168] gi|2633982|emb|CAB13483.1| succinyl-CoA synthetase (alpha subunit) [Bacillus subtilis subsp. subtilis str. 168] gi|291484161|dbj|BAI85236.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. natto BEST195] gi|320021650|gb|ADV96636.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis BSn5] Length = 300 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 173/299 (57%), Positives = 227/299 (75%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+T+V+VQG+TG FHT+Q + Y T +VGG+ P KG T G VPVF Sbjct: 1 MSVFINKDTRVIVQGITGSTALFHTKQMLEY-GTNIVGGVTPGKGGTEAEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + T ANASVIYVP A DAI+E+++AE+ L++CITE IPVLDMV+VK +E Sbjct: 56 TVAEAVQTTGANASVIYVPAPFAADAIMEAVDAELDLVICITEHIPVLDMVKVKRFMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S+ G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGVGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPDTHAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ GKTAPPG+ MGHAGA+ISGGKG A++KI + GI +A +P+ +G +L+++L Sbjct: 232 GFIGGKTAPPGKRMGHAGAIISGGKGTADEKIKTLNACGIEVAETPSVMGETLIKVLKE 290 >gi|90421716|ref|YP_530086.1| succinyl-CoA synthetase, alpha subunit [Rhodopseudomonas palustris BisB18] gi|90103730|gb|ABD85767.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodopseudomonas palustris BisB18] Length = 294 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 210/299 (70%), Positives = 245/299 (81%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+D NTKV+ QG TGK GTFH+E A+ Y T++VGG P KG + G +PVF Sbjct: 1 MSVLIDSNTKVICQGFTGKNGTFHSEAAMAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T A+ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRV+ L S Sbjct: 56 TVREAVDKTGADASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVRRSLIGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT++EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVMTAGECKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTREGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD T SI+M+GEIGGSAEE+AAQFL DEAKRGR KP V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADPKTTSIIMIGEIGGSAEEDAAQFLIDEAKRGRSKPTV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++L E L S Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAASKTAAMEAAGIAVSPSPARLGKTLAEKLKS 294 >gi|207856183|ref|YP_002242834.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206707986|emb|CAR32275.1| succinyl-CoA synthetase alpha chain [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 289 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAIIK 289 >gi|253701391|ref|YP_003022580.1| succinyl-CoA synthetase, subunit alpha [Geobacter sp. M21] gi|251776241|gb|ACT18822.1| succinyl-CoA synthetase, alpha subunit [Geobacter sp. M21] Length = 308 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 172/297 (57%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNTKV+ QG+TG G FH + A Y TQ+VGG+ P KG T G PVF Sbjct: 1 MSILVDKNTKVITQGITGSTGLFHAQGAREY-GTQMVGGVTPGKGGTSVDG----FPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+T A ASVIYVPP A D+I+E+I+A + L+ CITEGIPVLDMV+VK ++ Sbjct: 56 TVAEAVEQTGATASVIYVPPPFAADSIMEAIDAGLDLVCCITEGIPVLDMVKVKQYMQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I R G VG++SRSGTLTYEAV+Q + GLGQST Sbjct: 116 KTRLIGPNCPGVITPGQCKIGIMPGYIHRPGKVGVVSRSGTLTYEAVWQLTGYGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT +D L +F D TE+++M+GEIGGSAEEEAA F+++ KP+ Sbjct: 176 VGIGGDPVNGTSHLDCLRMFEEDPDTEAVIMIGEIGGSAEEEAAYFVREHM----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG+TAPPG+ MGHAGA+ISGGKG A +K+ ++ GI +A +PA + ++L+++ Sbjct: 232 GYIAGRTAPPGKRMGHAGAIISGGKGTAAEKVAILESCGISVAATPAEMAQALMKVY 288 >gi|209965473|ref|YP_002298388.1| succinyl-CoA synthetase subunit alpha [Rhodospirillum centenum SW] gi|209958939|gb|ACI99575.1| succinyl-CoA synthetase, alpha subunit [Rhodospirillum centenum SW] Length = 290 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 181/298 (60%), Positives = 235/298 (78%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T +++PVF Sbjct: 1 MAVLVNKDTKVICQGFTGAQGTFHSEQAIAY-GTRMVGGVTPGKGGTTH----LDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A +T ANASVIYVPP A DAI+E+I+A IPL+VCITEGIPVLDMV+VK L+ S Sbjct: 56 TVADAVAKTGANASVIYVPPPFAADAILEAIDAGIPLVVCITEGIPVLDMVKVKRALQDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TPD CKIGIMPG I R+G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GTRLIGPNCPGVITPDECKIGIMPGHIHRRGKIGIVSRSGTLTYEAVAQTTAAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT F+D L++F D T+ I+M+GEIGG AE + A+F+K+ G KKP+V Sbjct: 176 IGIGGDPVNGTSFVDALQMFAEDPETQGIIMIGEIGGDAEVKGAEFIKE---SGLKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGAVISGG A+ K++A++ AG+ +A SPA +G ++++ +G Sbjct: 233 GFIAGRTAPPGRRMGHAGAVISGGNDTADFKVDALRAAGVHVADSPASLGSTMLKAMG 290 >gi|229524090|ref|ZP_04413495.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae bv. albensis VL426] gi|229337671|gb|EEO02688.1| succinyl-CoA ligase [ADP-forming] alpha chain [Vibrio cholerae bv. albensis VL426] Length = 290 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 180/298 (60%), Positives = 224/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVDVTGATATVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTTDMIDVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D ATE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPATEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AE+K A++ AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAALESAGVKTVKSLADIGKALREVTG 289 >gi|118486457|gb|ABK95068.1| unknown [Populus trichocarpa] Length = 331 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 183/298 (61%), Positives = 230/298 (77%), Gaps = 9/298 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF +V Sbjct: 37 VFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNSV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS-S 121 +EAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMVRVKA ++K Sbjct: 92 SEAKAETKANASVIYVPPPFAAAAILEAVEAELDLVVCITEGIPQHDMVRVKAAIKKQTK 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G VGI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 152 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCV 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D +E FLAD TE IV++GEIGG+AEE+AA +K+ G +KP+V Sbjct: 212 GIGGDPFNGTNFVDCVEKFLADPQTEGIVLIGEIGGTAEEDAATLIKE---SGTEKPVVA 268 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA++SGGKG A+DKI +++AG+ + SPA+IG +++++ Sbjct: 269 FIAGVTAPPGRRMGHAGAIVSGGKGTAQDKIKTLRDAGVIVVESPAKIGTAMLDVFKE 326 >gi|75674619|ref|YP_317040.1| succinyl-CoA ligase, alpha subunit [Nitrobacter winogradskyi Nb-255] gi|74419489|gb|ABA03688.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nitrobacter winogradskyi Nb-255] Length = 294 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 210/298 (70%), Positives = 247/298 (82%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M IL+D+NT+V+ QG TGK GTFH+E AI Y T++VGG P KG +++PVF Sbjct: 1 MPILIDRNTRVICQGFTGKNGTFHSEAAIAY-GTKMVGGTSPGKGGQTH----LDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+E T A+ASVIYVPP+GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVREAREATGADASVIYVPPAGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRSLTGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ G+VGI+SRSGTLTYEAVFQTSQEGLGQ+TA Sbjct: 116 KSRLIGPNCPGVVTAGECKIGIMPANIFKPGNVGIVSRSGTLTYEAVFQTSQEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFID+LE+FLAD T +IVM+GEIGGSAEE+AAQFL DEA+RGR KP+V Sbjct: 176 VGIGGDPVKGTEFIDMLEMFLADPNTSAIVMIGEIGGSAEEDAAQFLIDEARRGRNKPVV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAPPGR MGHAGA+ISGGKG A K AM+ AGI ++PSPAR+G++LVE L Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAASKTAAMEAAGIAVSPSPARLGKTLVEKLK 293 >gi|15596786|ref|NP_250280.1| succinyl-CoA synthetase subunit alpha [Pseudomonas aeruginosa PAO1] gi|107101022|ref|ZP_01364940.1| hypothetical protein PaerPA_01002052 [Pseudomonas aeruginosa PACS2] gi|116049534|ref|YP_791662.1| succinyl-CoA synthetase subunit alpha [Pseudomonas aeruginosa UCBPP-PA14] gi|152988843|ref|YP_001349039.1| succinyl-CoA synthetase subunit alpha [Pseudomonas aeruginosa PA7] gi|218892454|ref|YP_002441321.1| succinyl-CoA synthetase subunit alpha [Pseudomonas aeruginosa LESB58] gi|254234689|ref|ZP_04928012.1| succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa C3719] gi|254239936|ref|ZP_04933258.1| succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa 2192] gi|296390036|ref|ZP_06879511.1| succinyl-CoA synthetase subunit alpha [Pseudomonas aeruginosa PAb1] gi|313106603|ref|ZP_07792829.1| succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa 39016] gi|12230978|sp|Q51567|SUCD_PSEAE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|9947553|gb|AAG04978.1|AE004587_2 succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa PAO1] gi|115584755|gb|ABJ10770.1| succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa UCBPP-PA14] gi|126166620|gb|EAZ52131.1| succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa C3719] gi|126193314|gb|EAZ57377.1| succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa 2192] gi|150964001|gb|ABR86026.1| succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa PA7] gi|218772680|emb|CAW28465.1| succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa LESB58] gi|310879331|gb|EFQ37925.1| succinyl-CoA synthetase alpha chain [Pseudomonas aeruginosa 39016] Length = 295 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 175/298 (58%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+ I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKEAVEATGAEASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|240851387|ref|YP_002972790.1| succinyl-CoA synthetase subunit alpha [Bartonella grahamii as4aup] gi|240268510|gb|ACS52098.1| succinyl-CoA synthetase subunit alpha [Bartonella grahamii as4aup] Length = 300 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 232/299 (77%), Positives = 270/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K TKVLVQGLTGK GTFHTEQA+ Y TQ+VGG++PKKG W G +P+F Sbjct: 1 MSILVNKETKVLVQGLTGKTGTFHTEQALAYHGTQMVGGVNPKKGGEIWEGSKGEALPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 VAEAKE+T A+ASVIYVPP+GA AIIE+IEAE+ LI+CITEGIPV+DMV+VKARLE Sbjct: 61 ANVAEAKEKTGADASVIYVPPAGAAAAIIEAIEAEVRLIICITEGIPVMDMVKVKARLEN 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGILTP+ CKIGIMPGSIFRKGSVG++SRSGTLTYEAVFQTSQEGLGQ+T Sbjct: 121 SKSRLIGPNCPGILTPNECKIGIMPGSIFRKGSVGVVSRSGTLTYEAVFQTSQEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEFIDVLE+FLAD+ T+SIVM+GEIGGSAEEEAAQFL+DEAK+GRKKP+ Sbjct: 181 AIGIGGDPVKGTEFIDVLEMFLADDETQSIVMIGEIGGSAEEEAAQFLQDEAKKGRKKPV 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSP++IG++L+ +L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPSQIGKTLMSVLK 299 >gi|152976201|ref|YP_001375718.1| succinyl-CoA synthetase subunit alpha [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024953|gb|ABS22723.1| succinyl-CoA synthetase, alpha subunit [Bacillus cytotoxicus NVH 391-98] Length = 300 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 180/299 (60%), Positives = 230/299 (76%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKV+VQG+TG G FHT+Q I Y T++VGG+ P KG T G VPVF Sbjct: 1 MSVLVNKDTKVIVQGITGSQGIFHTKQMIEY-GTKIVGGVTPGKGGTEIEG----VPVFH 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASVIYVPP+ A DAI+E+++AE+ L+VCITEGIPVLDMV+VK + Sbjct: 56 TVEDAVKATGANASVIYVPPAFAADAIMEAVDAELDLVVCITEGIPVLDMVKVKKYMAGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV Q +Q G+GQSTA Sbjct: 116 HTRLLGPNCPGIITPDECKIGIMPGYIHKKGHVGIVSRSGTLTYEAVHQLTQAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F DE T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTDFIDALKAFNEDEETHAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI M+ GI +A +PA +G +L+ +L Sbjct: 232 GFIGGQTAPAGKRMGHAGAIISGGKGTAAEKIKTMEACGIKVAETPAVMGETLISVLKE 290 >gi|163761407|ref|ZP_02168481.1| succinyl-CoA synthetase subunit alpha [Hoeflea phototrophica DFL-43] gi|162281402|gb|EDQ31699.1| succinyl-CoA synthetase subunit alpha [Hoeflea phototrophica DFL-43] Length = 300 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 224/299 (74%), Positives = 264/299 (88%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSIL++K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG + W G G +P+F Sbjct: 1 MSILINKDTKVLVQGLTGKTGTFHTEQALAYHGTQMVGGIHPKKGGSTWEGSGGEKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE K T ANASVIYVPP+GA AIIE+IEAEI LIVCITEGIPV DM+R K L+K Sbjct: 61 ASVAEGKSATGANASVIYVPPAGAAAAIIEAIEAEIELIVCITEGIPVADMIRAKDVLDK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPG++TPD CKIGIMPG+IF+KGSVGILSRSGTLTYEAVFQT+ EGLGQS+ Sbjct: 121 SKSRLIGPNCPGVMTPDECKIGIMPGNIFKKGSVGILSRSGTLTYEAVFQTTNEGLGQSS 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFID+L+L+L D TESI+M+GEIGGSAEE+AA++L ++AK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDILDLYLDDPETESIIMIGEIGGSAEEDAAEWLIEQAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIKAMEAAGIRVSPSPARLGKTLVEVLK 299 >gi|152969299|ref|YP_001334408.1| succinyl-CoA synthetase subunit alpha [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893766|ref|YP_002918500.1| succinyl-CoA synthetase subunit alpha [Klebsiella pneumoniae NTUH-K2044] gi|262041209|ref|ZP_06014421.1| succinyl-CoA synthetase subunit alpha [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|329998754|ref|ZP_08303208.1| succinate-CoA ligase, alpha subunit [Klebsiella sp. MS 92-3] gi|150954148|gb|ABR76178.1| succinyl-CoA synthetase alpha subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546082|dbj|BAH62433.1| succinyl-CoA synthetase alpha subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041438|gb|EEW42497.1| succinyl-CoA synthetase subunit alpha [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328538581|gb|EGF64685.1| succinate-CoA ligase, alpha subunit [Klebsiella sp. MS 92-3] Length = 289 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFEEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAIIK 289 >gi|510882|emb|CAA54877.1| putative succinyl-CoA synthetase alpha subunit [Coxiella burnetii] Length = 294 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 174/296 (58%), Positives = 224/296 (75%), Gaps = 10/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK T+VL QG TGK GTFH+EQAI Y TQ+VGG+ P KG G +P+F Sbjct: 1 MSILIDKETRVLCQGFTGKQGTFHSEQAIEY-GTQMVGGVTPGKGGQSHLG----LPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E T+A+A++I+VP D+IIE+++A + L+VCITEGIPVLDM+ VKA L + Sbjct: 56 SVHEAVEETSADATMIFVPAPFCKDSIIEAVDAGVRLVVCITEGIPVLDMLEVKAYLRQH 115 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPNCPG++TP CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q G GQST Sbjct: 116 PDVRMIGPNCPGVITPGECKIGIMPGHIHQRGKVGIVSRSGTLTYEAVNQTTQMGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT FIDVLE+F D T++IVMVGEIGG+AEEEAA+F++ KKP+ Sbjct: 176 CVGIGGDPIPGTSFIDVLEMFEKDSQTQAIVMVGEIGGTAEEEAAEFIQSNV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 + ++AG TAPPG+ MGHAGA+I+GGKG A DK A++ AG+ + SPA I ++L+ Sbjct: 232 ISYIAGVTAPPGKRMGHAGAIIAGGKGTAADKYAALEAAGVFVVKSPAEIAKALLR 287 >gi|254447449|ref|ZP_05060915.1| succinyl-CoA synthetase alpha chain [gamma proteobacterium HTCC5015] gi|198262792|gb|EDY87071.1| succinyl-CoA synthetase alpha chain [gamma proteobacterium HTCC5015] Length = 290 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 180/299 (60%), Positives = 219/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KNTKVL QG TGK GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLVNKNTKVLCQGFTGKQGTFHSEQALEY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A ASVIYVP D+IIE+ EA I L+VCITEGIP LDM+ K +++ Sbjct: 56 TVKEAVAQTGATASVIYVPAPFCKDSIIEAAEAGIELVVCITEGIPTLDMLEAKMVVDQL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+TP CKIGIMPG I + G VGI+SRSGTLTYEAV QTS G GQST Sbjct: 116 GVRLIGPNCPGIITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTSDLGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+LF D TE+IVMVGEIGG+AEEEAA+F+K+ KP+V Sbjct: 176 IGIGGDPIPGTGFIDALQLFQDDPQTEAIVMVGEIGGTAEEEAAEFIKEHV----DKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+I+GGKG A DK A++ AG+ SPA +G++L L+G Sbjct: 232 SYIAGVTAPKGKRMGHAGAIIAGGKGTAADKFAALQAAGVATVDSPADMGKALETLIGR 290 >gi|161504111|ref|YP_001571223.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865458|gb|ABX22081.1| hypothetical protein SARI_02209 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 289 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVDATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAIIK 289 >gi|153801968|ref|ZP_01956554.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae MZO-3] gi|124122482|gb|EAY41225.1| succinyl-CoA synthase, alpha subunit [Vibrio cholerae MZO-3] Length = 290 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 180/298 (60%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP DM+ VK +LE++ Sbjct: 56 TVREAVEVTGATATVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTTDMIDVKVKLEQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D ATE+IVM+GEIGG+ EEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPATEAIVMIGEIGGTTEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG AE+K A++ AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAALESAGVKTVKSLADIGKALREVTG 289 >gi|261341315|ref|ZP_05969173.1| succinyl-CoA synthetase subunit alpha [Enterobacter cancerogenus ATCC 35316] gi|288316619|gb|EFC55557.1| succinyl-CoA synthetase subunit alpha [Enterobacter cancerogenus ATCC 35316] Length = 289 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKSIIK 289 >gi|110635725|ref|YP_675933.1| succinyl-CoA synthetase subunit alpha [Mesorhizobium sp. BNC1] gi|110286709|gb|ABG64768.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Chelativorans sp. BNC1] Length = 303 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 228/302 (75%), Positives = 267/302 (88%), Gaps = 3/302 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN---VNVP 57 MSILVDKNTKVLVQGLTGK GTFHTEQA+ Y T++VGGIHPKKG W G +P Sbjct: 1 MSILVDKNTKVLVQGLTGKTGTFHTEQALAYYGTKMVGGIHPKKGGETWRSGLDSAAELP 60 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 +F +VAE KE+T A+ASVIYVPP+GA AIIE+IEAEIPLIVCITEGIPV+DMV VKA+L Sbjct: 61 IFASVAEGKEKTGADASVIYVPPAGAAAAIIEAIEAEIPLIVCITEGIPVMDMVHVKAKL 120 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +KS SRLIGPNCPG+LTP+ CKIGIMPG+IF+KGSVG++SRSGTLTYEAVFQT+ EGLGQ Sbjct: 121 DKSKSRLIGPNCPGVLTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTTNEGLGQ 180 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 +TAVGIGGDPVKGTEFID+LE+FLAD+ T+SI+M+GEIGGSAEE+AAQFL DEA+RGRKK Sbjct: 181 TTAVGIGGDPVKGTEFIDILEMFLADDETKSIIMIGEIGGSAEEDAAQFLMDEARRGRKK 240 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+ GF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPAR+G++L E + Sbjct: 241 PMAGFIAGRTAPKGRTMGHAGAVISGGKGGAEDKIEAMERAGIKVSPSPARLGQTLSEAI 300 Query: 298 GS 299 Sbjct: 301 KD 302 >gi|300722389|ref|YP_003711675.1| succinyl-CoA synthetase subunit alpha [Xenorhabdus nematophila ATCC 19061] gi|297628892|emb|CBJ89475.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Xenorhabdus nematophila ATCC 19061] Length = 289 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG G+FH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGSFHSEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVDATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDQA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKAGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ LL Sbjct: 232 AYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKALLA 289 >gi|115522326|ref|YP_779237.1| succinyl-CoA synthetase, alpha subunit [Rhodopseudomonas palustris BisA53] gi|115516273|gb|ABJ04257.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodopseudomonas palustris BisA53] Length = 294 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 216/298 (72%), Positives = 249/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+D NTKV+ QG TGK GTFH+E A+ Y T++VGG P KG + G +PVF Sbjct: 1 MSVLIDSNTKVICQGFTGKNGTFHSEAAVAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+E+T A ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVKEAREQTGAEASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRSLSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+QEGLGQ+TA Sbjct: 116 KSRLIGPNCPGVVTAGQCKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTQEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLADE T SIVM+GEIGGSAEEEAAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADEKTHSIVMIGEIGGSAEEEAAQFLIDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA++SGGKG A KI AM+ AGI ++PSPAR+G++L E L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGDAGSKIAAMEAAGIIVSPSPARLGKTLAERLK 293 >gi|313895074|ref|ZP_07828631.1| succinyl-CoA synthetase, alpha subunit [Selenomonas sp. oral taxon 137 str. F0430] gi|312975969|gb|EFR41427.1| succinyl-CoA synthetase, alpha subunit [Selenomonas sp. oral taxon 137 str. F0430] Length = 301 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 167/299 (55%), Positives = 221/299 (73%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTK +VQG+TGKA FHT Q +L TQ+V G+ P K G VPV+ Sbjct: 1 MSILIDKNTKAIVQGITGKAALFHTRQ-MLDAGTQIVAGVTPGKAGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T ANASVIYVP A D+I+E+++AE+PL++CITE IPVLDMV+V+ ++ Sbjct: 56 TVRDAVEATGANASVIYVPARFAADSIMEAVDAELPLVICITEHIPVLDMVKVRRYMQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPG+LTP+ K+GI P S+ + G VG++SRSGTLTYEA FQ + G+GQ+T Sbjct: 116 KSRLVGPNCPGLLTPNQAKLGITPTSVAKPGHVGLVSRSGTLTYEAAFQLTNAGIGQTTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVK +FIDVL+LF D T ++ M+GEIGG+AEEEAA+++K+ +KP+ Sbjct: 176 VGIGGDPVKDMDFIDVLKLFKEDPDTLAVFMIGEIGGTAEEEAAKWIKENM---PEKPVA 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+ APPG+ MGHAGA+ISGGKG A DK+ A+ AGI +A + A IG ++V+LL Sbjct: 233 AFIAGRQAPPGKRMGHAGAIISGGKGTAADKVAALNAAGIPVADTVAHIGETMVKLLKE 291 >gi|296330825|ref|ZP_06873300.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674343|ref|YP_003866015.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. spizizenii str. W23] gi|296151830|gb|EFG92704.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412587|gb|ADM37706.1| succinyl-CoA synthetase subunit alpha [Bacillus subtilis subsp. spizizenii str. W23] Length = 300 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 172/299 (57%), Positives = 226/299 (75%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+T+V+VQG+TG FHT+Q + Y T +VGG+ P KG T G VPVF Sbjct: 1 MSVFINKDTRVIVQGITGSTALFHTKQMLEY-GTNIVGGVTPGKGGTEAEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + T ANASVIYVP A DAI+E+++AE+ L++CITE IPVLDMV+VK +E Sbjct: 56 TVAEAVQTTGANASVIYVPAPFAADAIMEAVDAELDLVICITEHIPVLDMVKVKRFMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S+ G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGVGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID L+ F D T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDALKAFNEDPDTHAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ GKTAPPG+ MGHAGA+ISGGKG A++KI + GI +A +P+ +G +L+++L Sbjct: 232 GFIGGKTAPPGKRMGHAGAIISGGKGTADEKIKTLNACGIEVAETPSVMGETLIKVLKE 290 >gi|255318879|ref|ZP_05360105.1| succinate-CoA ligase, alpha subunit family [Acinetobacter radioresistens SK82] gi|262378865|ref|ZP_06072022.1| succinyl-CoA synthetase subunit alpha [Acinetobacter radioresistens SH164] gi|255304135|gb|EET83326.1| succinate-CoA ligase, alpha subunit family [Acinetobacter radioresistens SK82] gi|262300150|gb|EEY88062.1| succinyl-CoA synthetase subunit alpha [Acinetobacter radioresistens SH164] Length = 296 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 170/301 (56%), Positives = 225/301 (74%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKVLVQG TGK GTFH+EQAI Y T+VVGG+ P KG ++N+PVF Sbjct: 1 MSVLVNKDTKVLVQGFTGKNGTFHSEQAIAY-GTKVVGGVTPGKGGQ----SHLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA + T A+ASVIYVP D+I+E+++A I LIV ITEG+P LDM++ K LE Sbjct: 56 TMREAVQETQADASVIYVPAPFVLDSIVEAVDAGIGLIVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RLIGPNCPGI+TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLIGPNCPGIITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVSQTTRLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQDDPETDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGMAYTRSPAELGSTMLQVLK 291 Query: 299 S 299 Sbjct: 292 D 292 >gi|198242661|ref|YP_002214707.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197937177|gb|ACH74510.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326622463|gb|EGE28808.1| succinyl-CoA ligase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 289 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASV+YVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVVYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAIIK 289 >gi|146307522|ref|YP_001187987.1| succinyl-CoA synthetase subunit alpha [Pseudomonas mendocina ymp] gi|145575723|gb|ABP85255.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Pseudomonas mendocina ymp] Length = 295 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG + G +PVF Sbjct: 1 MSILINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGSTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVEATGAEASVIYVPAPFCKDSILEAANGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|289209200|ref|YP_003461266.1| succinyl-CoA synthetase, subunit alpha [Thioalkalivibrio sp. K90mix] gi|288944831|gb|ADC72530.1| succinyl-CoA synthetase, alpha subunit [Thioalkalivibrio sp. K90mix] Length = 291 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 170/297 (57%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD++TKV+ QG TGK G+FH+EQAI Y T++VGG+ P KG ++ PVF Sbjct: 1 MSILVDRDTKVICQGFTGKQGSFHSEQAIAY-GTRLVGGVTPGKGGQTH----LDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A +T A S+IYVP A DAI E+ +A I L VCITEGIPV DM+RVK L S Sbjct: 56 TVADAVAQTGATVSMIYVPAPFAADAICEAADAGIELAVCITEGIPVQDMIRVKQVLAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S+RLIGPNCPGI+TPD+CK+GIMPG I ++G +GI+SRSGTLTYEAV QTS GLGQST Sbjct: 116 STRLIGPNCPGIITPDACKVGIMPGYIHQRGRIGIISRSGTLTYEAVKQTSDRGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP++G +F+D L LF D T+ +++VGEIGG AEE AA+++++E KP+ Sbjct: 176 IGIGGDPIQGLDFVDCLRLFRDDPETDGVLLVGEIGGDAEERAARYIENE----FDKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAPPGR MGHAGA+I+GG+G AE K+ A++ AG +A SPA +G+++ L Sbjct: 232 AYIAGATAPPGRRMGHAGAIIAGGQGTAEQKMAALRAAGASVAESPAELGQAMQSAL 288 >gi|170747354|ref|YP_001753614.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium radiotolerans JCM 2831] gi|170653876|gb|ACB22931.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium radiotolerans JCM 2831] Length = 294 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 222/298 (74%), Positives = 251/298 (84%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+++D NTKV+ QG TGK GTFH+EQAI Y T++VGG P KG + G +PVF Sbjct: 1 MSVMIDANTKVICQGFTGKNGTFHSEQAIAY-GTKMVGGTSPGKGGSSHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E T A ASV+YVPP GA DAI E+I AE+PLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVAEAREATGAEASVVYVPPPGAADAICEAIAAEVPLIVCITEGIPVLDMVRVKRALTGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+T KIGIMP +IFR GSVGI+SRSGTLTYEAVFQTS GLGQ+TA Sbjct: 116 KSRLVGPNCPGIVTAGESKIGIMPANIFRPGSVGIVSRSGTLTYEAVFQTSNAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLELFLAD TESIVM+GEIGGSAEEEAAQFLKDEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLELFLADPKTESIVMIGEIGGSAEEEAAQFLKDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPAR+G +LVE+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAGIRVSPSPARLGSTLVEVLK 293 >gi|226330944|ref|ZP_03806462.1| hypothetical protein PROPEN_04867 [Proteus penneri ATCC 35198] gi|225201739|gb|EEG84093.1| hypothetical protein PROPEN_04867 [Proteus penneri ATCC 35198] Length = 289 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 175/298 (58%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGTAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ L+ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEAIKSLIK 289 >gi|304321562|ref|YP_003855205.1| Succinyl-CoA synthetase subunit alpha [Parvularcula bermudensis HTCC2503] gi|303300464|gb|ADM10063.1| Succinyl-CoA synthetase alpha chain [Parvularcula bermudensis HTCC2503] Length = 299 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 206/302 (68%), Positives = 239/302 (79%), Gaps = 8/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----V 56 MSILVDKNTKV+ QGLTGK GTFHTE AI Y T++VGG+ P KG W G V + Sbjct: 1 MSILVDKNTKVICQGLTGKTGTFHTEHAIAY-GTKMVGGVTPGKGGQTWEAGEVASGATL 59 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF TV AKE T A+ASVIYVPP A +IIE+IEAEIPL++ ITEGIPVLDMV+VKA+ Sbjct: 60 PVFDTVQAAKEETGADASVIYVPPKFAAASIIEAIEAEIPLVITITEGIPVLDMVKVKAK 119 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 LE S +RL+GPNCPG++TPD CKIGIMPG I R+GSVGI+SRSGTLTYEAV QT+Q GLG Sbjct: 120 LEGSKTRLVGPNCPGVITPDECKIGIMPGHIHRRGSVGIVSRSGTLTYEAVHQTTQVGLG 179 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QST VGIGGDPVKG +FIDVLELFLAD+ T+ I+M+GEIGGSAE EAA FL + K Sbjct: 180 QSTCVGIGGDPVKGMDFIDVLELFLADDETQQIIMIGEIGGSAETEAAAFLAE---SKVK 236 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP VGF+AG TAPPGR MGHAGA++SGG AE KI AMK AGI ++PSPA +G ++ EL Sbjct: 237 KPTVGFIAGVTAPPGRRMGHAGAIVSGGADTAEAKIEAMKAAGISVSPSPAGLGATMKEL 296 Query: 297 LG 298 L Sbjct: 297 LA 298 >gi|145635046|ref|ZP_01790752.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae PittAA] gi|145267654|gb|EDK07652.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae PittAA] Length = 289 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 180/298 (60%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPAPFCKDAIIEAIDAGIKLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEE+AA F+KD KP+V Sbjct: 176 VGIGGDPIPGSSFIDILERFQQDPETEAIVMIGEIGGSAEEDAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L ++L Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAAEKIAALEAAGVTCVKSLAEIGAALRKILK 289 >gi|225024310|ref|ZP_03713502.1| hypothetical protein EIKCOROL_01185 [Eikenella corrodens ATCC 23834] gi|224942895|gb|EEG24104.1| hypothetical protein EIKCOROL_01185 [Eikenella corrodens ATCC 23834] Length = 296 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 167/301 (55%), Positives = 224/301 (74%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQAI Y T+VVGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQAIAY-GTKVVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE Sbjct: 56 TMNEAVRETGADASVIYVPAPFVLDSIVEAVDSGVKLVVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGKIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF AD TE+I+++GEIGG+AEEEAA+F++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFEADPQTEAIILIGEIGGTAEEEAAEFIQSNVS----KP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AG+ SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFRAFEKAGVAYTRSPAELGSTMLEVLK 291 Query: 299 S 299 + Sbjct: 292 A 292 >gi|206579009|ref|YP_002239647.1| succinate-CoA ligase, alpha subunit [Klebsiella pneumoniae 342] gi|288936488|ref|YP_003440547.1| succinyl-CoA synthetase, subunit alpha [Klebsiella variicola At-22] gi|290510456|ref|ZP_06549826.1| succinyl-CoA ligase subunit alpha [Klebsiella sp. 1_1_55] gi|206568067|gb|ACI09843.1| succinate-CoA ligase, alpha subunit [Klebsiella pneumoniae 342] gi|288891197|gb|ADC59515.1| succinyl-CoA synthetase, alpha subunit [Klebsiella variicola At-22] gi|289777172|gb|EFD85170.1| succinyl-CoA ligase subunit alpha [Klebsiella sp. 1_1_55] Length = 289 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAIIK 289 >gi|78485717|ref|YP_391642.1| succinyl-CoA synthetase, alpha subunit [Thiomicrospira crunogena XCL-2] gi|78364003|gb|ABB41968.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Thiomicrospira crunogena XCL-2] Length = 293 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 179/302 (59%), Positives = 229/302 (75%), Gaps = 13/302 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+NTKV+ QG TGK GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDQNTKVICQGFTGKQGTFHSEQAIAY-GTKMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A AS+IYVPP+ A D+IIE+I+A I +I CITEGIPV DM++V+A LEKS Sbjct: 56 TVKEAVTQTGAEASMIYVPPAFAADSIIEAIDAGIKVITCITEGIPVNDMLKVRAVLEKS 115 Query: 121 SSRLIGPNCPGILTPDS----CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + LIGPNCPG++TP + CKIGIMPG I G VGI+SRSGTLTYEAV QT+Q GLG Sbjct: 116 DAFLIGPNCPGLITPGNDKKGCKIGIMPGHIHLPGKVGIVSRSGTLTYEAVHQTTQNGLG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QST VGIGGDP++G +FID L LF ADE T+ I++VGEIGG AEE+AA+++K Sbjct: 176 QSTCVGIGGDPIQGMDFIDCLRLFQADEQTQGIILVGEIGGQAEEDAAEYIKQHV----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V ++AG TAP G+ MGHAGA++SGGKG AE K A++ AG+ + SPA +G ++++L Sbjct: 232 KPVVAYIAGVTAPAGKRMGHAGAIVSGGKGTAEAKFTALESAGVTVVRSPADLGAAMLDL 291 Query: 297 LG 298 +G Sbjct: 292 IG 293 >gi|37525387|ref|NP_928731.1| succinyl-CoA synthetase subunit alpha [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784814|emb|CAE13726.1| succinyl-CoA synthetase alpha chain [Photorhabdus luminescens subsp. laumondii TTO1] Length = 291 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 177/298 (59%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLAVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I R G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHRAGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQQDPQTEAIVMIGEIGGTAEEEAAAYIKQHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +LL Sbjct: 232 AYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKDLLA 289 >gi|157146663|ref|YP_001453982.1| succinyl-CoA synthetase subunit alpha [Citrobacter koseri ATCC BAA-895] gi|157083868|gb|ABV13546.1| hypothetical protein CKO_02429 [Citrobacter koseri ATCC BAA-895] Length = 289 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+++A I LI+ ITEGIP LDM+ VK L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAVDAGIKLIITITEGIPTLDMLTVKVALDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAVMK 289 >gi|255065288|ref|ZP_05317143.1| succinyl-CoA synthetase subunit alpha [Neisseria sicca ATCC 29256] gi|255050709|gb|EET46173.1| succinyl-CoA synthetase subunit alpha [Neisseria sicca ATCC 29256] Length = 296 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 165/301 (54%), Positives = 225/301 (74%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG +N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGSTMLEVLK 291 Query: 299 S 299 + Sbjct: 292 A 292 >gi|307942803|ref|ZP_07658148.1| succinyl-CoA ligase, alpha subunit [Roseibium sp. TrichSKD4] gi|307773599|gb|EFO32815.1| succinyl-CoA ligase, alpha subunit [Roseibium sp. TrichSKD4] Length = 302 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 223/301 (74%), Positives = 267/301 (88%), Gaps = 3/301 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGG---NVNVP 57 MSILV+K+TK++VQGLTGK G+FHTEQA+ Y TQ+V G+HPKKG WT + +P Sbjct: 1 MSILVNKDTKIIVQGLTGKTGSFHTEQALQYYGTQMVAGVHPKKGGESWTSNLDADAKLP 60 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 ++ +V EAKE T A+ASVIYVPP+GAG AIIE+I+AEIP I CITEGIPV DMV+VK RL Sbjct: 61 IYASVGEAKEATGADASVIYVPPAGAGAAIIEAIDAEIPFISCITEGIPVADMVKVKRRL 120 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 EKS+SRL+GPNCPGILTP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQTS GLGQ Sbjct: 121 EKSNSRLLGPNCPGILTPEECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTSNAGLGQ 180 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 +TAVGIGGDPVKGTEFIDVLE+FLAD+ T+SI+M+GEIGGSAEEEAAQF+KDEAK+GR K Sbjct: 181 TTAVGIGGDPVKGTEFIDVLEMFLADDETQSIIMIGEIGGSAEEEAAQFIKDEAKKGRNK 240 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+ GF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM++AGI ++PSPA++G +L+E+L Sbjct: 241 PMAGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMEDAGIKVSPSPAKLGETLLEVL 300 Query: 298 G 298 Sbjct: 301 K 301 >gi|71281395|ref|YP_268947.1| succinyl-CoA synthase subunit alpha [Colwellia psychrerythraea 34H] gi|71147135|gb|AAZ27608.1| succinyl-CoA synthase, alpha subunit [Colwellia psychrerythraea 34H] Length = 290 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIDY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A A+VIYVP DAI+E+I+A I LIV ITEGIP LDMV VKA+L ++ Sbjct: 56 TVRDAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTLDMVDVKAKLTQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP KIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGETKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAEYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L E G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGVALKEKTG 289 >gi|212712442|ref|ZP_03320570.1| hypothetical protein PROVALCAL_03536 [Providencia alcalifaciens DSM 30120] gi|212684899|gb|EEB44427.1| hypothetical protein PROVALCAL_03536 [Providencia alcalifaciens DSM 30120] Length = 290 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 174/299 (58%), Positives = 219/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVTPGKGGTIHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHMPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGNAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ LL Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKSLLNK 290 >gi|261364253|ref|ZP_05977136.1| succinyl-CoA synthetase subunit alpha [Neisseria mucosa ATCC 25996] gi|288567495|gb|EFC89055.1| succinyl-CoA synthetase subunit alpha [Neisseria mucosa ATCC 25996] Length = 296 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 165/301 (54%), Positives = 224/301 (74%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG +N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGSTMLEVLK 291 Query: 299 S 299 + Sbjct: 292 A 292 >gi|188534428|ref|YP_001908225.1| Succinyl-CoA synthetase, alpha subunit [Erwinia tasmaniensis Et1/99] gi|188029470|emb|CAO97347.1| Succinyl-CoA synthetase, alpha subunit [Erwinia tasmaniensis Et1/99] Length = 290 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 175/297 (58%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D I+E+IEA I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDGILEAIEAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP +CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGACKIGIMPGHIHQPGRIGIVSRSGTLTYEAVKQTTDIGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQDDPQTEAIVMIGEIGGSAEEEAAAFIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEAVKAVL 288 >gi|197117852|ref|YP_002138279.1| succinyl-CoA synthetase subunit alpha [Geobacter bemidjiensis Bem] gi|197087212|gb|ACH38483.1| succinyl-CoA synthetase, alpha subunit [Geobacter bemidjiensis Bem] Length = 308 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 173/297 (58%), Positives = 223/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNTKV+ QG+TG G FH + A Y TQ+VGG+ P KG + G PVF Sbjct: 1 MSILVDKNTKVITQGITGATGLFHAQGAREY-GTQMVGGVTPGKGGSNVDG----FPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+T ANASVIYVPP A D+I+E+I+A + L+ CITEGIPVLDMV+VK ++ Sbjct: 56 TVAEAVEKTGANASVIYVPPPFAADSIMEAIDAGLDLVCCITEGIPVLDMVKVKQYMQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I R G VG++SRSGTLTYEAV+Q + GLGQST Sbjct: 116 KTRLIGPNCPGVITPGQCKIGIMPGYIHRPGKVGVVSRSGTLTYEAVWQLTGYGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT +D L++F D TE+++M+GEIGGSAEEEAA F+K+ KP+ Sbjct: 176 VGIGGDPVNGTSHLDCLKMFEEDPDTEAVIMIGEIGGSAEEEAAYFVKEHM----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG+TAPPG+ MGHAGA+ISGGKG A +K+ ++ GI +A +PA + ++L+++ Sbjct: 232 GYIAGRTAPPGKRMGHAGAIISGGKGTAAEKVAILESCGISVAATPAEMAQALMKVY 288 >gi|167855518|ref|ZP_02478281.1| SucD [Haemophilus parasuis 29755] gi|167853384|gb|EDS24635.1| SucD [Haemophilus parasuis 29755] Length = 290 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 177/299 (59%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH++QA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSQQALDY-GTQLVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP G DAI+E+I+A I L+VCITEGIP LDM++VK RL ++ Sbjct: 56 TVREAVEATGATATVIYVPAPGCKDAILEAIDAGIQLVVCITEGIPTLDMLQVKQRLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP+ CKIGIMPGSI +KG +GI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPNECKIGIMPGSIHKKGKIGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L LF AD TE+I+M+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILTLFQADPETEAIIMIGEIGGSAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEAAGVKTVRSLADIGVALQAVLNK 290 >gi|146310887|ref|YP_001175961.1| succinyl-CoA synthetase subunit alpha [Enterobacter sp. 638] gi|145317763|gb|ABP59910.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Enterobacter sp. 638] Length = 289 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDALKAIIK 289 >gi|223044245|ref|ZP_03614282.1| succinate-CoA ligase, alpha subunit subfamily [Staphylococcus capitis SK14] gi|222442395|gb|EEE48503.1| succinate-CoA ligase, alpha subunit subfamily [Staphylococcus capitis SK14] Length = 302 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 170/296 (57%), Positives = 223/296 (75%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T AN SV+YVP A D+I+E+ EAE+ +++CITE IPV+DMV+VK L+ Sbjct: 56 TVEEAKNETGANVSVVYVPAPFAADSILEAAEAELDMVICITEHIPVVDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T+++VM+GEIGG+AEEEAAQ++KD KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKEFNEDPETKAVVMIGEIGGTAEEEAAQWIKDNM----NKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI + + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTADEKIKTLNDCGVETADTPSEIGTTLIEA 287 >gi|18655523|pdb|1JKJ|A Chain A, E. Coli Scs gi|18655525|pdb|1JKJ|D Chain D, E. Coli Scs gi|18655527|pdb|1JLL|A Chain A, Crystal Structure Analysis Of The E197betaa Mutant Of E. Coli Scs gi|18655529|pdb|1JLL|D Chain D, Crystal Structure Analysis Of The E197betaa Mutant Of E. Coli Scs Length = 288 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 172/297 (57%), Positives = 217/297 (73%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 SIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF T Sbjct: 1 SILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFNT 55 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 VREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST V Sbjct: 116 VRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+VG Sbjct: 176 GIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 YIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 288 >gi|192360780|ref|YP_001981995.1| succinyl-CoA synthetase subunit alpha [Cellvibrio japonicus Ueda107] gi|190686945|gb|ACE84623.1| succinyl-CoA synthetase alpha chain [Cellvibrio japonicus Ueda107] Length = 290 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+ A I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVDATGAEASVIYVPAPFCKDSILEAANAGIKLIVCITEGIPTMDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF AD TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQADPQTEAIVMIGEIGGSAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A +K A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTAAEKFAALEDAGVKTVKSLADIGKALKEITG 289 >gi|225075112|ref|ZP_03718311.1| hypothetical protein NEIFLAOT_00111 [Neisseria flavescens NRL30031/H210] gi|224953596|gb|EEG34805.1| hypothetical protein NEIFLAOT_00111 [Neisseria flavescens NRL30031/H210] Length = 296 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 165/301 (54%), Positives = 225/301 (74%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG +N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVLK 291 Query: 299 S 299 + Sbjct: 292 A 292 >gi|290474108|ref|YP_003466985.1| succinyl-CoA synthetase subunit alpha [Xenorhabdus bovienii SS-2004] gi|289173418|emb|CBJ80195.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Xenorhabdus bovienii SS-2004] Length = 291 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 176/298 (59%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDQA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD+CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPDACKIGIMPGHIHKAGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGTAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ LL Sbjct: 232 AYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKVLLA 289 >gi|330503178|ref|YP_004380047.1| succinyl-CoA synthetase subunit alpha [Pseudomonas mendocina NK-01] gi|328917464|gb|AEB58295.1| succinyl-CoA synthetase subunit alpha [Pseudomonas mendocina NK-01] Length = 295 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVAATGAEASVIYVPAPFCKDSILEAANGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|119503181|ref|ZP_01625265.1| Succinyl-CoA synthetase, alpha subunit [marine gamma proteobacterium HTCC2080] gi|119460827|gb|EAW41918.1| Succinyl-CoA synthetase, alpha subunit [marine gamma proteobacterium HTCC2080] Length = 290 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+NTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG +++PVF Sbjct: 1 MSILIDQNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGQTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T A+ASVIYVP + D+I+E+ A I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVDEAVDQTGADASVIYVPAAFCKDSILEAANAGIQLIVCITEGIPTLDMLECKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP +CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGACKIGIMPGHIHLPGRVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L LF AD +TE+IVM+GEIGG+AEEEAA F+KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILTLFEADPSTEAIVMIGEIGGTAEEEAAAFIKDNVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG ++ +L G Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEDAGVRTVRSLADIGAAMADLTG 289 >gi|291616732|ref|YP_003519474.1| SucD [Pantoea ananatis LMG 20103] gi|291151762|gb|ADD76346.1| SucD [Pantoea ananatis LMG 20103] gi|327393158|dbj|BAK10580.1| succinyl-CoA synthetase alpha chain SucD [Pantoea ananatis AJ13355] Length = 291 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 173/299 (57%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDGILEAIDAGIKLIITITEGIPTLDMLTVKMKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHQPGRVGIVSRSGTLTYEAVKQTTDIGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQDDPQTEAIVMIGEIGGSAEEEAAAFIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L + Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVLPA 290 >gi|145633073|ref|ZP_01788805.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae 3655] gi|144986299|gb|EDJ92878.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae 3655] Length = 293 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 182/299 (60%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG G FH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGAFHSEQALAY-GTQLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP S DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 176 VGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L ++L S Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKSLAEIGAALRKVLKS 290 >gi|121634761|ref|YP_975006.1| succinyl-CoA synthetase subunit alpha [Neisseria meningitidis FAM18] gi|120866467|emb|CAM10213.1| putative succinyl-CoA synthetase alpha subunit [Neisseria meningitidis FAM18] Length = 296 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 166/300 (55%), Positives = 224/300 (74%), Gaps = 11/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG +N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TPD CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPDECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVLK 291 >gi|16759678|ref|NP_455295.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142549|ref|NP_805891.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213051756|ref|ZP_03344634.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425387|ref|ZP_03358137.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213579891|ref|ZP_03361717.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|289824374|ref|ZP_06543967.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25293455|pir||AG0591 succinyl-CoA synthetase alpha chain [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501971|emb|CAD05201.1| succinyl-CoA synthetase alpha chain [Salmonella enterica subsp. enterica serovar Typhi] gi|29138180|gb|AAO69751.1| succinyl-CoA synthetase alpha chain [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 289 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T V+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTNVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAIIK 289 >gi|300024732|ref|YP_003757343.1| succinyl-CoA synthetase, subunit alpha [Hyphomicrobium denitrificans ATCC 51888] gi|299526553|gb|ADJ25022.1| succinyl-CoA synthetase, alpha subunit [Hyphomicrobium denitrificans ATCC 51888] Length = 299 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 206/298 (69%), Positives = 251/298 (84%), Gaps = 2/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV-NVPVF 59 MSILVDK TKV+ QG+TG GTFHT+QA Y T++VGG+ P KG + + +VP+F Sbjct: 1 MSILVDKATKVICQGITGSQGTFHTKQARAY-GTKIVGGVTPGKGGSKHPDAELADVPLF 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAEA RT A AS IYVPP A DAI+E+I+AE+PLIVCITEGIPV+DMVRVK L+ Sbjct: 60 DSVAEAVARTGATASSIYVPPPFAADAILEAIDAEVPLIVCITEGIPVMDMVRVKRALDG 119 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTPD CKIGIMPG+IF+ GSVGI+SRSGTLTYEAV QT+ GLGQ+T Sbjct: 120 SKSRLVGPNCPGILTPDQCKIGIMPGNIFKHGSVGIVSRSGTLTYEAVKQTTDVGLGQTT 179 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVL+LFL+D+ T+SI+M+GEIGGSAEE+A++FL EA++GRKKP+ Sbjct: 180 AVGIGGDPVKGTEFIDVLDLFLSDDETQSIIMIGEIGGSAEEDASEFLTREARKGRKKPM 239 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPGR MGHAGA+ISGGKG AEDK+ AM+ AGI I+PSPA +GR+L+++L Sbjct: 240 AGFIAGVTAPPGRRMGHAGAIISGGKGKAEDKLAAMQAAGIAISPSPAALGRTLIDIL 297 >gi|189184255|ref|YP_001938040.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi str. Ikeda] gi|189181026|dbj|BAG40806.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi str. Ikeda] Length = 292 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 187/300 (62%), Positives = 237/300 (79%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVD+NTKV+ QG+TG GTFHTEQA+ Y T++VGG+ P KG +N+PV+ Sbjct: 1 MSVLVDRNTKVICQGITGAQGTFHTEQALKY-GTKMVGGVTPGKGGQTI----LNLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA ++T A ASVIYVPP+ A D+I E+I+A I L+VCITEGIPVLDM+++K L+ S Sbjct: 56 SVDEAVQKTGATASVIYVPPAFAADSIFEAIDAGIELLVCITEGIPVLDMLKIKQVLKGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TP+ CKIGIMPG I + GS+GI+SRSGTLTYEAV QT++ GLGQST Sbjct: 116 KTRLIGPNCPGIITPEQCKIGIMPGHIHKAGSIGIISRSGTLTYEAVAQTTEVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT F+D LELFLAD T++I+++GEIGGSAEEEAA FLK KKPIV Sbjct: 176 IGIGGDPINGTSFVDCLELFLADGDTKAIIIIGEIGGSAEEEAADFLKSSRI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG TAPPG+ MGHAGA+I G KG A K+ A+K AG+CIA SPA+IG+++ LL +L Sbjct: 233 GFIAGVTAPPGKRMGHAGAIIDGEKGAASSKLEALKSAGVCIAESPAKIGQTMYNLLHNL 292 >gi|283784484|ref|YP_003364349.1| succinyl-CoA synthetase alpha chain [Citrobacter rodentium ICC168] gi|282947938|emb|CBG87502.1| succinyl-CoA synthetase alpha chain [Citrobacter rodentium ICC168] Length = 289 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGAIATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAVIK 289 >gi|268590345|ref|ZP_06124566.1| succinyl-CoA synthetase subunit alpha [Providencia rettgeri DSM 1131] gi|291314255|gb|EFE54708.1| succinyl-CoA synthetase subunit alpha [Providencia rettgeri DSM 1131] Length = 290 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 176/299 (58%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVTPGKGGTVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHMPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF AD TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQADPQTEAIVMIGEIGGNAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ LL Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKSLLNK 290 >gi|308186074|ref|YP_003930205.1| Succinyl-CoA synthetase, alpha subunit [Pantoea vagans C9-1] gi|308056584|gb|ADO08756.1| Succinyl-CoA synthetase, alpha subunit [Pantoea vagans C9-1] Length = 291 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 174/299 (58%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D I+E+IEA I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDGILEAIEAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHQPGRVGIVSRSGTLTYEAVKQTTDIGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQDDPQTEAIVMIGEIGGSAEEEAAAFIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L + Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVLPA 290 >gi|219870878|ref|YP_002475253.1| succinyl-CoA synthetase alpha chain [Haemophilus parasuis SH0165] gi|219691082|gb|ACL32305.1| succinyl-CoA synthetase alpha chain [Haemophilus parasuis SH0165] Length = 290 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 177/299 (59%), Positives = 221/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH++QA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSQQALDY-GTQLVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP G DAI+E+I+A I L+VCITEGIP LDM++VK RL ++ Sbjct: 56 TVREAVEATGATATVIYVPAPGCKDAILEAIDAGIQLVVCITEGIPTLDMLQVKQRLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGCIHKKGKIGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L LF AD TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILTLFQADPETEAIVMIGEIGGSAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S IG +L +L Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEAAGVKTVRSLGDIGAALQAVLNK 290 >gi|300715881|ref|YP_003740684.1| succinyl-CoA synthetase, alpha subunit [Erwinia billingiae Eb661] gi|299061717|emb|CAX58833.1| Succinyl-CoA synthetase, alpha subunit [Erwinia billingiae Eb661] Length = 290 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D I+E+IEA I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDGILEAIEAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP +CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGACKIGIMPGHIHQPGRIGIVSRSGTLTYEAVKQTTDIGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAFIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVLPK 290 >gi|154686026|ref|YP_001421187.1| succinyl-CoA synthetase subunit alpha [Bacillus amyloliquefaciens FZB42] gi|154351877|gb|ABS73956.1| SucD [Bacillus amyloliquefaciens FZB42] gi|328553495|gb|AEB23987.1| succinyl-CoA synthetase subunit alpha [Bacillus amyloliquefaciens TA208] gi|328911713|gb|AEB63309.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Bacillus amyloliquefaciens LL3] Length = 300 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 174/299 (58%), Positives = 226/299 (75%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+T+V+VQG+TG FHT+Q + Y T +VGG+ P KG T G VPVF Sbjct: 1 MSVFINKDTRVIVQGITGSTALFHTKQMLEY-GTNIVGGVTPGKGGTEAEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A+ASVIYVP A DAI+E+++AEI L++CITE IPVLDMV+VK +E Sbjct: 56 TVAEAVHTTGADASVIYVPAPFAADAIMEAVDAEIDLVICITEHIPVLDMVKVKRFMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S+ G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGVGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPETHAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ GKTAPPG+ MGHAGA+ISGGKG AE+K+ M GI +A +P+ +G +L+++L Sbjct: 232 GFIGGKTAPPGKRMGHAGAIISGGKGTAEEKVKTMNACGIEVAETPSVMGETLIKVLKE 290 >gi|148284071|ref|YP_001248161.1| succinyl-CoA synthetase, alpha chain [Orientia tsutsugamushi str. Boryong] gi|146739510|emb|CAM79216.1| succinyl-CoA synthetase, alpha chain [Orientia tsutsugamushi str. Boryong] Length = 292 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 186/300 (62%), Positives = 237/300 (79%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVD+NTKV+ QG+TG GTFHTEQA+ Y T++VGG+ P KG +N+PV+ Sbjct: 1 MSVLVDRNTKVICQGITGAQGTFHTEQALKY-GTKMVGGVTPGKGGQTI----LNLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA ++T A ASVIYVPP+ A D+I E+I+A I L+VCITEGIPVLDM+++K L+ S Sbjct: 56 SVDEAVQKTGATASVIYVPPAFAADSIFEAIDAGIELLVCITEGIPVLDMLKIKQVLKGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TP+ CKIGIMPG I + GS+GI+SRSGTLTYEAV QT++ GLGQST Sbjct: 116 KTRLIGPNCPGIITPEQCKIGIMPGHIHKAGSIGIISRSGTLTYEAVAQTTEVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGD + GT F+D LELFLAD+ T++I+++GEIGGSAEEEAA FLK KKPIV Sbjct: 176 IGIGGDTINGTSFVDCLELFLADDDTKAIIIIGEIGGSAEEEAADFLKSSRI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG TAPPG+ MGHAGA+I G KG A K+ A+K AG+CIA SPA+IG+++ LL +L Sbjct: 233 GFIAGVTAPPGKRMGHAGAIIDGEKGAASSKLEALKSAGVCIAESPAKIGQTMYNLLHNL 292 >gi|83944770|ref|ZP_00957136.1| succinyl-CoA synthetase alpha subunit [Oceanicaulis alexandrii HTCC2633] gi|83851552|gb|EAP89407.1| succinyl-CoA synthetase alpha subunit [Oceanicaulis alexandrii HTCC2633] Length = 302 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 225/301 (74%), Positives = 267/301 (88%), Gaps = 3/301 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN---VP 57 MS+LV+K+TKV+VQGLTGK GTFHTEQA+ Y T++V G+HPKKG WT G +P Sbjct: 1 MSVLVNKDTKVIVQGLTGKTGTFHTEQALNYYGTKMVAGVHPKKGGESWTSGLDGSATLP 60 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 ++ TV +AKE T A ASVIYVPP+GAG AIIE+I+A I LI CITEGIPV+DMV+VKARL Sbjct: 61 IYATVGDAKEATGATASVIYVPPAGAGAAIIEAIDAGIELITCITEGIPVMDMVKVKARL 120 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 EKS+SRL+GPNCPG+LTP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQTS GLGQ Sbjct: 121 EKSNSRLLGPNCPGVLTPEECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTSNAGLGQ 180 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 +TAVGIGGDPVKGTEFIDVLE+FLAD+ T+SI+M+GEIGGSAEE+AAQFLKDEAK+GRKK Sbjct: 181 TTAVGIGGDPVKGTEFIDVLEMFLADDETKSIIMIGEIGGSAEEDAAQFLKDEAKKGRKK 240 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+VGF+AG+TAPPGRTMGHAGA++SGGKGGAEDKI AMK AGI ++ SPAR+G +LVE+L Sbjct: 241 PMVGFIAGRTAPPGRTMGHAGAIVSGGKGGAEDKIEAMKAAGIVVSDSPARLGDTLVEVL 300 Query: 298 G 298 Sbjct: 301 K 301 >gi|127512587|ref|YP_001093784.1| succinyl-CoA synthetase, alpha subunit [Shewanella loihica PV-4] gi|126637882|gb|ABO23525.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella loihica PV-4] Length = 290 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 175/298 (58%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQVHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A A+VIYVP DAI+E+I+ I LIVCITEGIP LDM+ VK +LE++ Sbjct: 56 TVKDAVAETGATATVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLEVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG +L G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGSALRAKTG 289 >gi|238650299|ref|YP_002916151.1| succinyl-CoA synthetase subunit alpha [Rickettsia peacockii str. Rustic] gi|238624397|gb|ACR47103.1| succinyl-CoA synthetase subunit alpha [Rickettsia peacockii str. Rustic] Length = 292 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 176/296 (59%), Positives = 231/296 (78%), Gaps = 8/296 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K T+V+ QG TG GTFH+EQAI Y T +VGG+ P KG +++PV+ Sbjct: 1 MAILINKKTQVICQGFTGLQGTFHSEQAIAY-GTNMVGGVTPGKGGHTH----LDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+AEI ++VCITEGIPVLDM++VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAEIEVVVCITEGIPVLDMMKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +E+FL D+ T++I+M+GEIGG+AEE+AA+F+K KKPIV Sbjct: 176 VGIGGDPVNGTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDAAEFIKQSKI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 F+AG TAPPG+ MGHAGA+I G G AEDK+ A++ AG+ I SPA IG++++++ Sbjct: 233 SFIAGITAPPGKRMGHAGAIIVGRTGSAEDKLEALQSAGVIITRSPADIGKTMLDV 288 >gi|311280397|ref|YP_003942628.1| succinyl-CoA synthetase, alpha subunit [Enterobacter cloacae SCF1] gi|308749592|gb|ADO49344.1| succinyl-CoA synthetase, alpha subunit [Enterobacter cloacae SCF1] Length = 289 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKSIIK 289 >gi|319637661|ref|ZP_07992427.1| succinyl-CoA ligase subunit alpha [Neisseria mucosa C102] gi|317400816|gb|EFV81471.1| succinyl-CoA ligase subunit alpha [Neisseria mucosa C102] Length = 296 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 165/301 (54%), Positives = 224/301 (74%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG +N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGSTMLEVLK 291 Query: 299 S 299 + Sbjct: 292 A 292 >gi|304395710|ref|ZP_07377593.1| succinyl-CoA synthetase, alpha subunit [Pantoea sp. aB] gi|304357004|gb|EFM21368.1| succinyl-CoA synthetase, alpha subunit [Pantoea sp. aB] Length = 291 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 174/299 (58%), Positives = 219/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D I+E+IEA I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDGILEAIEAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHQPGRVGIVSRSGTLTYEAVKQTTDIGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQDDPQTEVIVMIGEIGGSAEEEAAAFIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L + Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVLPA 290 >gi|269103072|ref|ZP_06155769.1| succinyl-CoA ligase [ADP-forming] alpha chain [Photobacterium damselae subsp. damselae CIP 102761] gi|268162970|gb|EEZ41466.1| succinyl-CoA ligase [ADP-forming] alpha chain [Photobacterium damselae subsp. damselae CIP 102761] Length = 290 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 177/299 (59%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGSTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAI+E+I+A I LIV ITEGIP LDM+ VK RL+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDAILEAIDAGIELIVTITEGIPTLDMLDVKVRLDQA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I + G+VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHKAGNVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L +F D AT++IVM+GEIGG+AEE+AA ++K KP+V Sbjct: 176 VGIGGDPIPGSSFIDILAMFEQDPATDAIVMIGEIGGTAEEDAAAYIKQHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAPPG+ MGHAGA+ISGGKG AEDK A++ AG+ S A IG L E++ Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVRTVKSLADIGLVLREVMPK 290 >gi|82775997|ref|YP_402344.1| succinyl-CoA synthetase subunit alpha [Shigella dysenteriae Sd197] gi|309786392|ref|ZP_07681018.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella dysenteriae 1617] gi|81240145|gb|ABB60855.1| succinyl-CoA synthetase, alpha subunit [Shigella dysenteriae Sd197] gi|308925786|gb|EFP71267.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Shigella dysenteriae 1617] Length = 289 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGCTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVHSLADIGEALKTVLK 289 >gi|240112778|ref|ZP_04727268.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae MS11] gi|254493638|ref|ZP_05106809.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae 1291] gi|268598846|ref|ZP_06133013.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae MS11] gi|226512678|gb|EEH62023.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae 1291] gi|268582977|gb|EEZ47653.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae MS11] Length = 296 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 163/301 (54%), Positives = 222/301 (73%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG +++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTNLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++ G TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYITGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVLK 291 Query: 299 S 299 + Sbjct: 292 A 292 >gi|261377714|ref|ZP_05982287.1| succinyl-CoA synthetase subunit alpha [Neisseria cinerea ATCC 14685] gi|269145989|gb|EEZ72407.1| succinyl-CoA synthetase subunit alpha [Neisseria cinerea ATCC 14685] Length = 296 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 165/301 (54%), Positives = 224/301 (74%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG +N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVLK 291 Query: 299 S 299 + Sbjct: 292 A 292 >gi|253990445|ref|YP_003041801.1| succinyl-CoA synthetase subunit alpha [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638988|emb|CAR67603.1| succinyl-coa synthetase, alpha subunit (ec 6.2.1.4) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781895|emb|CAQ85059.1| succinyl-CoA synthetase, alpha subunit [Photorhabdus asymbiotica] Length = 291 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 176/298 (59%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLAVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TPD CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPDECKIGIMPGHIHQAGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA ++K + KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGTAEEEAAAYIKQQV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +LL Sbjct: 232 AYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKDLLA 289 >gi|52840779|ref|YP_094578.1| succinyl CoA synthetase alpha chain [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627890|gb|AAU26631.1| succinyl CoA synthetase alpha chain [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 291 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 180/299 (60%), Positives = 221/299 (73%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDK+TKVL QG TGK GT+HTEQA+ Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLVDKHTKVLCQGFTGKQGTYHTEQALAY-GTKMVGGVTPGKGGQMHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA E T A+ASVIYVP D+IIE+ EA I LIVCITEG+PVLDM++VK +E + Sbjct: 56 TMREAVEETKADASVIYVPAPFCKDSIIEAAEAGIKLIVCITEGVPVLDMLQVKVYIENN 115 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RLIGPNCPGI+TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ +G GQST Sbjct: 116 TQARLIGPNCPGIITPGECKIGIMPGYIHLPGKVGIVSRSGTLTYEAVKQTTDKGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT FID L LF D TE+I+MVGEIGGSAEEEAA+F+K KKP+ Sbjct: 176 CIGIGGDPIPGTSFIDALSLFEKDPKTEAIIMVGEIGGSAEEEAAEFIKSHV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG TAP G+ MGHAGA+ISGGKG A +K A++ AG+ SPA +G ++ E+ G Sbjct: 232 VSYIAGVTAPAGKRMGHAGAIISGGKGTAAEKYAALEAAGVKTVRSPADLGDAIAEVTG 290 >gi|26990877|ref|NP_746302.1| succinyl-CoA synthetase subunit alpha [Pseudomonas putida KT2440] gi|148546907|ref|YP_001267009.1| succinyl-CoA synthetase subunit alpha [Pseudomonas putida F1] gi|167034751|ref|YP_001669982.1| succinyl-CoA synthetase subunit alpha [Pseudomonas putida GB-1] gi|170722672|ref|YP_001750360.1| succinyl-CoA synthetase subunit alpha [Pseudomonas putida W619] gi|325275364|ref|ZP_08141312.1| succinyl-CoA synthetase subunit alpha [Pseudomonas sp. TJI-51] gi|24985890|gb|AAN69766.1|AE016613_1 succinyl-CoA synthetase, alpha subunit [Pseudomonas putida KT2440] gi|148510965|gb|ABQ77825.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Pseudomonas putida F1] gi|166861239|gb|ABY99646.1| succinyl-CoA synthetase, alpha subunit [Pseudomonas putida GB-1] gi|169760675|gb|ACA73991.1| succinyl-CoA synthetase, alpha subunit [Pseudomonas putida W619] gi|313497969|gb|ADR59335.1| SucD [Pseudomonas putida BIRD-1] gi|324099508|gb|EGB97406.1| succinyl-CoA synthetase subunit alpha [Pseudomonas sp. TJI-51] Length = 294 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A+ASVIYVP D+I+E+ I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKEAVEATGADASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVTLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|59801308|ref|YP_208020.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae FA 1090] gi|240014233|ref|ZP_04721146.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae DGI18] gi|240016669|ref|ZP_04723209.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae FA6140] gi|240080858|ref|ZP_04725401.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae FA19] gi|240115529|ref|ZP_04729591.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae PID18] gi|240117824|ref|ZP_04731886.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae PID1] gi|240121796|ref|ZP_04734758.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae PID24-1] gi|240123379|ref|ZP_04736335.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae PID332] gi|240125627|ref|ZP_04738513.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae SK-92-679] gi|260440660|ref|ZP_05794476.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae DGI2] gi|268596975|ref|ZP_06131142.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae FA19] gi|268601204|ref|ZP_06135371.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae PID18] gi|268603524|ref|ZP_06137691.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae PID1] gi|268682004|ref|ZP_06148866.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae PID332] gi|268684216|ref|ZP_06151078.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae SK-92-679] gi|291043968|ref|ZP_06569684.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae DGI2] gi|293399168|ref|ZP_06643333.1| succinyl-CoA ligase subunit alpha [Neisseria gonorrhoeae F62] gi|59718203|gb|AAW89608.1| putative succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae FA 1090] gi|268550763|gb|EEZ45782.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae FA19] gi|268585335|gb|EEZ50011.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae PID18] gi|268587655|gb|EEZ52331.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae PID1] gi|268622288|gb|EEZ54688.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae PID332] gi|268624500|gb|EEZ56900.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae SK-92-679] gi|291012431|gb|EFE04420.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae DGI2] gi|291610582|gb|EFF39692.1| succinyl-CoA ligase subunit alpha [Neisseria gonorrhoeae F62] Length = 296 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 164/301 (54%), Positives = 223/301 (74%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG +++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTNLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVLK 291 Query: 299 S 299 + Sbjct: 292 A 292 >gi|254294600|ref|YP_003060623.1| succinyl-CoA synthetase subunit alpha [Hirschia baltica ATCC 49814] gi|254043131|gb|ACT59926.1| succinyl-CoA synthetase, alpha subunit [Hirschia baltica ATCC 49814] Length = 300 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 228/299 (76%), Positives = 270/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSIL+DKNTK+L QG+TGK G+FHT QA+ Y TQ+VGGIHPKKG T WT +P+F Sbjct: 1 MSILIDKNTKILTQGMTGKTGSFHTNQALDYFGTQMVGGIHPKKGGTNWTSDKGQELPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE KE+T A+ASVIYVPP+G G AIIE+IEAEIPLIVCITEG+PVLDMV VKA+L+K Sbjct: 61 ASVAEGKEKTGADASVIYVPPAGCGAAIIEAIEAEIPLIVCITEGVPVLDMVDVKAKLDK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPG++TP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAV+QTS EGLGQ++ Sbjct: 121 SKSRLIGPNCPGLMTPEQCKIGIMPGSIFKKGSVGVVSRSGTLTYEAVYQTSVEGLGQTS 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD+ TESI+M+GEIGGSAEEEAAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADDETESIIMIGEIGGSAEEEAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAPPGRTMGHAGA++SGGKGGAEDKI AM+EAGI ++PSPAR+G ++ E+L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAIVSGGKGGAEDKIAAMEEAGITVSPSPARLGVTMTEVLK 299 >gi|242373539|ref|ZP_04819113.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis M23864:W1] gi|242348902|gb|EES40504.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis M23864:W1] Length = 302 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 168/296 (56%), Positives = 223/296 (75%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T AN SV+YVP A D+I+E+ EA++ +++CITE IPV+DMV+VK L+ Sbjct: 56 TVQEAKNETGANVSVVYVPAPFAADSILEAAEADLDMVICITEHIPVVDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T+++VM+GEIGG+AEEEAAQ++K+ KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKEFNEDPETKAVVMIGEIGGTAEEEAAQWIKENM----NKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI + + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTADEKIKTLNDCGVETADTPSEIGTTLIEA 287 >gi|183598179|ref|ZP_02959672.1| hypothetical protein PROSTU_01558 [Providencia stuartii ATCC 25827] gi|188020346|gb|EDU58386.1| hypothetical protein PROSTU_01558 [Providencia stuartii ATCC 25827] Length = 290 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 172/299 (57%), Positives = 219/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHMPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPQTEAIVMIGEIGGNAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKSMLAK 290 >gi|104782657|ref|YP_609155.1| succinyl-CoA synthetase subunit alpha [Pseudomonas entomophila L48] gi|95111644|emb|CAK16365.1| succinyl-CoA synthetase alpha chain [Pseudomonas entomophila L48] Length = 294 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A+ASVIYVP D+I+E+ I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKEAVEATGADASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVTLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|91975019|ref|YP_567678.1| succinyl-CoA synthetase, alpha subunit [Rhodopseudomonas palustris BisB5] gi|91681475|gb|ABE37777.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodopseudomonas palustris BisB5] Length = 294 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 215/298 (72%), Positives = 251/298 (84%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NTKV+ QG TGK GTFH+E A+ Y T++VGG P KG T G +PVF Sbjct: 1 MSILIDANTKVICQGFTGKNGTFHSEAAVAY-GTKMVGGTSPGKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+++T A+ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK L S Sbjct: 56 TVREARDKTGADASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVLDMVRVKRSLVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++T CKIGIMP +IF++GSVGI+SRSGTLTYEAVFQT+ EGLGQ+TA Sbjct: 116 KSRLIGPNCPGVMTAGECKIGIMPANIFKQGSVGIVSRSGTLTYEAVFQTTSEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFIDVLE+FLAD+ T SI+M+GEIGGSAEEEAAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFIDVLEMFLADDKTTSIIMIGEIGGSAEEEAAQFLIDEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAPPGR MGHAGA+ISGGKG A K +AM+ AGI ++PSPAR+G++LVE+L Sbjct: 236 GFIAGVTAPPGRRMGHAGAIISGGKGDAASKTSAMEAAGITVSPSPARLGKTLVEVLK 293 >gi|259909075|ref|YP_002649431.1| Succinyl-CoA synthetase, alpha subunit [Erwinia pyrifoliae Ep1/96] gi|224964697|emb|CAX56214.1| Succinyl-CoA synthetase, alpha subunit [Erwinia pyrifoliae Ep1/96] gi|283479101|emb|CAY75017.1| succinyl-CoA synthetase alpha chain [Erwinia pyrifoliae DSM 12163] gi|310767025|gb|ADP11975.1| Succinyl-CoA synthetase, alpha subunit [Erwinia sp. Ejp617] Length = 290 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 173/297 (58%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDGILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP +CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGACKIGIMPGHIHQPGRIGIVSRSGTLTYEAVKQTTDIGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQDDPQTEAIVMIGEIGGSAEEEAAAFIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVL 288 >gi|304387735|ref|ZP_07369915.1| succinyl-CoA synthetase subunit alpha [Neisseria meningitidis ATCC 13091] gi|304338211|gb|EFM04341.1| succinyl-CoA synthetase subunit alpha [Neisseria meningitidis ATCC 13091] Length = 296 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 164/300 (54%), Positives = 223/300 (74%), Gaps = 11/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG +++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVLK 291 >gi|90406990|ref|ZP_01215180.1| succinyl-CoA synthetase alpha subunit [Psychromonas sp. CNPT3] gi|90311861|gb|EAS39956.1| succinyl-CoA synthetase alpha subunit [Psychromonas sp. CNPT3] Length = 301 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 177/298 (59%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILINKDTKVICQGFTGGQGTFHSEQAIDY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A A+VIYVP DAI+E+I+A I LIV ITEG+P LDM+ VK +L+++ Sbjct: 56 TVREAIDATGATATVIYVPAPFCKDAILEAIDAGISLIVTITEGMPTLDMLEVKVKLDQA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G FID+L LF AD TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGASFIDILALFEADPETEAIVMIGEIGGTAEEEAAAFIKQHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG AEDK A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFRALEDAGVKTTKSLAEIGKALREVTG 289 >gi|323489568|ref|ZP_08094795.1| succinyl-CoA synthetase subunit alpha [Planococcus donghaensis MPA1U2] gi|323396699|gb|EGA89518.1| succinyl-CoA synthetase subunit alpha [Planococcus donghaensis MPA1U2] Length = 300 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 176/299 (58%), Positives = 225/299 (75%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+TKVLVQG+TG FHT+Q + Y T++V G+ P KG T G VPVF Sbjct: 1 MSVYINKDTKVLVQGITGSTALFHTKQMLEY-GTKIVAGVTPGKGGTEAEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T AN SVIYVP A DAI+E++EAE+ + +CITE IPVLDMV+V +E Sbjct: 56 TVEEAVKATGANVSVIYVPAPFAADAILEAVEAELDMAICITEHIPVLDMVKVNRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD CKIGIMPG I +KG VG++SRSGTLTYEA Q S+EG+GQSTA Sbjct: 116 KTRLVGPNCPGVITPDECKIGIMPGYIHKKGHVGVVSRSGTLTYEATHQLSEEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T ++VM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKEFNEDEDTYAVVMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAP G+ MGHAGA+ISGGKG A DKI AM EAGI +A +P+ IG +L++++ Sbjct: 232 GFIGGQTAPEGKRMGHAGAIISGGKGTAADKIKAMNEAGIEVADTPSVIGETLIKVIKE 290 >gi|253998618|ref|YP_003050681.1| succinyl-CoA synthetase subunit alpha [Methylovorus sp. SIP3-4] gi|313200692|ref|YP_004039350.1| succinyl-CoA synthetase subunit alpha [Methylovorus sp. MP688] gi|253985297|gb|ACT50154.1| succinyl-CoA synthetase, alpha subunit [Methylovorus sp. SIP3-4] gi|312440008|gb|ADQ84114.1| succinyl-CoA synthetase, alpha subunit [Methylovorus sp. MP688] Length = 295 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 177/299 (59%), Positives = 230/299 (76%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVD++TKVL QG TGK GTFH+EQA+ Y T++VGG+ P KG ++++PVF Sbjct: 1 MAILVDQHTKVLCQGFTGKQGTFHSEQALAY-GTRMVGGVTPGKGGQ----QHLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A T ANASVIYVPP A D+I+E+ +A +PLIVCITEGIPVLDM+ VKA L+ + Sbjct: 56 TMRDAVRETGANASVIYVPPPFAADSILEACDAGVPLIVCITEGIPVLDMLNVKAALKAN 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TPD+CKIGIMPGSI +G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GARLIGPNCPGVITPDACKIGIMPGSIHLRGKVGIVSRSGTLTYEAVHQTTALGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP++G FID L LF D TE+I+MVGEIGG+ EE AA+++K KP+ Sbjct: 176 VGIGGDPIRGMNFIDCLALFEQDPETEAIIMVGEIGGADEEAAAEYIKQHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG+TAP G+ MGHAGA+ISGG G AEDKI A+++AG+ +A SPA +G ++ + + Sbjct: 232 GYIAGQTAPKGKRMGHAGAIISGGSGKAEDKIRALEQAGVIVASSPAGLGEAVQAAIKA 290 >gi|238926407|ref|ZP_04658167.1| succinate--CoA ligase (ADP-forming) [Selenomonas flueggei ATCC 43531] gi|238885811|gb|EEQ49449.1| succinate--CoA ligase (ADP-forming) [Selenomonas flueggei ATCC 43531] Length = 301 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 162/299 (54%), Positives = 223/299 (74%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+++DK+TKV+VQG+TGKA FHT+Q + Y T++VGG+ P K G VPVF Sbjct: 1 MSVMIDKDTKVIVQGITGKAAMFHTQQMLDY-GTKIVGGVTPGKAGQDVHG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A ASVIYVP A D+I+E+++AE+ L+VCITE IPVLDMV+V+ ++ Sbjct: 56 TVADAVKATGATASVIYVPARFAADSILEAVDAELDLVVCITEHIPVLDMVKVRRYMQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG+LT K+GI PG++ + G VG++SRSGTLTYEA FQ + G+GQ+T Sbjct: 116 KTRLVGPNCPGLLTAQQSKLGITPGTVSKPGHVGLISRSGTLTYEAAFQLTNAGIGQTTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGT+FID L+LF D T +++++GEIGG+AEE+AA+++K+ KP+ Sbjct: 176 VGIGGDPVKGTDFIDALQLFKDDPDTYAVLIIGEIGGTAEEDAAKWIKENM---PNKPVS 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+ APPG+ MGHAGA+ISGGKG A DK+ A+ AGI +A + A IG ++V+LL Sbjct: 233 AFIAGRQAPPGKRMGHAGAIISGGKGTAADKVAALNAAGIPVADTVAHIGETMVKLLKE 291 >gi|160872669|ref|ZP_02062801.1| succinyl-CoA synthetase, alpha subunit [Rickettsiella grylli] gi|159121468|gb|EDP46806.1| succinyl-CoA synthetase, alpha subunit [Rickettsiella grylli] Length = 289 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 178/298 (59%), Positives = 219/298 (73%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TGK GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGKQGTFHSEQAIAY-GTKMVGGVTPGKGGTQHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A +T A+ASVIYVP D+IIE+ +A I IVCITEGIPVLDM+ VK LE Sbjct: 56 TVADAVAKTGADASVIYVPAPFCKDSIIEAADAGISFIVCITEGIPVLDMLDVKVYLETK 115 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +RL+GPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 NIARLVGPNCPGVITPGECKIGIMPGYIHQSGRVGIVSRSGTLTYEAVKQTTDLGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ G F+DVL LF D TE+I+MVGEIGG+AEEEAA F+K KP+ Sbjct: 176 CVGIGGDPIPGMNFVDVLRLFQEDPQTEAILMVGEIGGNAEEEAAAFIK----TKVTKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V ++AG TAP G+ MGHAGA+ISGGKG A +K A++ AG+ SP +G+ + +LL Sbjct: 232 VAYIAGVTAPVGKRMGHAGAIISGGKGTAAEKFKALEAAGVYTVKSPTDMGKRIAQLL 289 >gi|218768043|ref|YP_002342555.1| succinyl-CoA synthetase subunit alpha [Neisseria meningitidis Z2491] gi|121052051|emb|CAM08360.1| putative succinyl-CoA synthetase alpha subunit [Neisseria meningitidis Z2491] Length = 296 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 164/300 (54%), Positives = 223/300 (74%), Gaps = 11/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG +++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNVS----KP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVLK 291 >gi|194098454|ref|YP_002001513.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae NCCP11945] gi|239998852|ref|ZP_04718776.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae 35/02] gi|240128083|ref|ZP_04740744.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae SK-93-1035] gi|241760343|ref|ZP_04758438.1| succinate-CoA ligase, alpha subunit family [Neisseria flavescens SK114] gi|268594695|ref|ZP_06128862.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae 35/02] gi|268686472|ref|ZP_06153334.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae SK-93-1035] gi|193933744|gb|ACF29568.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae NCCP11945] gi|241319221|gb|EER55699.1| succinate-CoA ligase, alpha subunit family [Neisseria flavescens SK114] gi|268548084|gb|EEZ43502.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae 35/02] gi|268626756|gb|EEZ59156.1| succinyl-CoA synthetase alpha subunit [Neisseria gonorrhoeae SK-93-1035] gi|317164140|gb|ADV07681.1| succinyl-CoA synthetase subunit alpha [Neisseria gonorrhoeae TCDC-NG08107] Length = 296 Score = 321 bits (823), Expect = 6e-86, Method: Composition-based stats. Identities = 164/301 (54%), Positives = 224/301 (74%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG +++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVLK 291 Query: 299 S 299 + Sbjct: 292 A 292 >gi|225850686|ref|YP_002730920.1| succinate-CoA ligase, alpha subunit subfamily [Persephonella marina EX-H1] gi|225646629|gb|ACO04815.1| succinate-CoA ligase, alpha subunit subfamily [Persephonella marina EX-H1] Length = 292 Score = 321 bits (823), Expect = 6e-86, Method: Composition-based stats. Identities = 167/301 (55%), Positives = 220/301 (73%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKV+VQG+TG+ G+FH Q Y TQVVGG+ P KG G +PVF Sbjct: 1 MSVLVDKNTKVIVQGITGREGSFHATQCKAY-GTQVVGGVTPGKGGQEVEG----IPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA + T A+ S+I+VPP A DAI+E+++A I ++CITEGIPV DM+ VK ++ Sbjct: 56 SVKEAVDNTGADCSLIFVPPPFAADAILEAVDAGIKTVICITEGIPVNDMIPVKNYIKTY 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP+ KIGIMPG IF++G+VGI+SRSGTLTYEA FQ S +G+GQS Sbjct: 116 YPDTVLIGPNCPGVITPEEAKIGIMPGHIFKRGNVGIVSRSGTLTYEAAFQLSNKGIGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDPV GT F DVL+ F D TE+IVM+GEIGG+AEEEAA+F+K+ KP Sbjct: 176 TVIGIGGDPVPGTVFSDVLKWFQDDPETEAIVMIGEIGGTAEEEAAEFIKEYV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V ++AG TAPPG+ MGHAGA+I+GGKG A++K A++ AG + + IG + E+LG Sbjct: 232 VVAYIAGVTAPPGKRMGHAGAIIAGGKGTADEKYRALEAAGATTVKNISTIGDVVAEVLG 291 Query: 299 S 299 Sbjct: 292 K 292 >gi|51473621|ref|YP_067378.1| succinyl-CoA synthetase subunit alpha [Rickettsia typhi str. Wilmington] gi|81636362|sp|Q9AKE1|SUCD_RICTY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|13235359|emb|CAC33725.1| Succinyl-CoA synthetase alpha subunit [Rickettsia typhi] gi|51459933|gb|AAU03896.1| Succinate thiokinase [Rickettsia typhi str. Wilmington] Length = 292 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 178/300 (59%), Positives = 231/300 (77%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K TKV+ QG TG GTFH+EQAI Y T +VGG+ P KG +N+PV+ Sbjct: 1 MAILINKKTKVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGHTH----LNLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+A+I ++VCITEGIPVLDMV+VK L S Sbjct: 56 TVHEAKAKTDANASVIYVPPGFAADSILEAIDAKIEVVVCITEGIPVLDMVKVKRALIGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKTGIIGIVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT F++ +E+FL D+ T++I+M+GEIGG+AEE+AA F+K KKPIV Sbjct: 176 IGIGGDPVNGTSFVECIEMFLQDDETKAIIMIGEIGGNAEEDAADFIKQSKI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAP + MGHAGA+ISGGKG A+DK+ A++ AG+ I SPA IG+++++LL + Sbjct: 233 SFIAGITAPSDKRMGHAGAIISGGKGSAKDKLEALQSAGVTITKSPADIGKTMLDLLNKI 292 >gi|163738926|ref|ZP_02146339.1| dihydrolipoamide acetyltransferase [Phaeobacter gallaeciensis BS107] gi|163741830|ref|ZP_02149220.1| succinyl-CoA synthase, alpha subunit [Phaeobacter gallaeciensis 2.10] gi|161385003|gb|EDQ09382.1| succinyl-CoA synthase, alpha subunit [Phaeobacter gallaeciensis 2.10] gi|161387731|gb|EDQ12087.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Phaeobacter gallaeciensis BS107] Length = 294 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 197/299 (65%), Positives = 248/299 (82%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG +N+PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVKRALEDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QT+ GLGQSTA Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTADIGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVL++FL D+ T+SI+M+GEIGGSAEEEAA+F+ ++ K+GR KPI Sbjct: 176 VGIGGDPIKGTEHIDVLDMFLNDDETQSIIMIGEIGGSAEEEAAEFIAEQKKKGRWKPIA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AMK AGI +A SPA +G ++++ +G Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIVVADSPATLGEAVLKAIGK 294 >gi|119383310|ref|YP_914366.1| succinyl-CoA synthetase, alpha subunit [Paracoccus denitrificans PD1222] gi|119373077|gb|ABL68670.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Paracoccus denitrificans PD1222] Length = 294 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 197/299 (65%), Positives = 241/299 (80%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+K+TKV+ QG+TG GTFHTEQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MAVLVNKDTKVICQGITGSQGTFHTEQAIAY-GTQMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA +T ANA+ IYVPP A D+I+E+I+AEIPLIV ITEGIPVLDM++VK LE S Sbjct: 56 SVHEAVAKTGANATAIYVPPPFAADSILEAIDAEIPLIVAITEGIPVLDMMKVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPGI+TPD CKIGIMPGSIF++GSVG++SRSGTLTYEAV QTS GLGQS+A Sbjct: 116 KSLLIGPNCPGIMTPDECKIGIMPGSIFKRGSVGVVSRSGTLTYEAVKQTSDVGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KG E IDVL +FL D TESI+M+GEIGGSAEEEAA+FL ++ ++G+ KP Sbjct: 176 VGIGGDPIKGMEHIDVLRMFLDDPETESIIMIGEIGGSAEEEAAEFLAEQKRKGKWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAP GR MGHAGA++SGGKG AE KI AMK AGI +A SPA +G ++++ LG Sbjct: 236 GFIAGRTAPKGRRMGHAGAIVSGGKGDAESKIEAMKSAGIVVADSPAGLGEAVLKALGR 294 >gi|304438122|ref|ZP_07398065.1| succinyl-CoA synthetase subunit alpha [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368895|gb|EFM22577.1| succinyl-CoA synthetase subunit alpha [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 301 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 161/299 (53%), Positives = 222/299 (74%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+++DK+TKV+VQG+TGKA FHT+Q + Y T++V G+ P K G VPVF Sbjct: 1 MSVMIDKDTKVIVQGITGKAAMFHTQQMLAY-GTKIVAGVTPGKAGQEVHG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A ASVIYVP A D+I+E+++AE+ L+VCITE IPVLDMV+V+ ++ Sbjct: 56 TVADAVKATGATASVIYVPARFAADSILEAVDAELDLVVCITEHIPVLDMVKVRRYMQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG+LT K+GI PG++ + G VG++SRSGTLTYEA FQ + G+GQ+T Sbjct: 116 KTRLVGPNCPGLLTSQQSKLGITPGTVSKPGHVGLISRSGTLTYEAAFQLTNAGIGQTTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGT+FID L+LF D T +++++GEIGG+AEE+AA+++K+ KP+ Sbjct: 176 VGIGGDPVKGTDFIDALQLFKDDPDTYAVLIIGEIGGTAEEDAAKWIKENM---PNKPVS 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+ APPG+ MGHAGA+ISGGKG A DK+ A+ AGI +A + A IG ++V+LL Sbjct: 233 AFIAGRQAPPGKRMGHAGAIISGGKGTAADKVAALNAAGIPVADTVAHIGETMVKLLKE 291 >gi|261392693|emb|CAX50266.1| succinyl-CoA synthetase alpha chain (SCS-alpha) [Neisseria meningitidis 8013] gi|325128082|gb|EGC50977.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis N1568] gi|325142235|gb|EGC64652.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis 961-5945] gi|325198192|gb|ADY93648.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis G2136] Length = 296 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 165/300 (55%), Positives = 223/300 (74%), Gaps = 11/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG +N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVLK 291 >gi|315648146|ref|ZP_07901247.1| succinyl-CoA synthetase, alpha subunit [Paenibacillus vortex V453] gi|315276792|gb|EFU40135.1| succinyl-CoA synthetase, alpha subunit [Paenibacillus vortex V453] Length = 309 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 178/304 (58%), Positives = 228/304 (75%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSIL+DKNTKV+ QG+TGK FH + A+ Y TQ+VGG P KG T G V Sbjct: 1 MSILIDKNTKVITQGITGKTALFHAKGALDY-GTQMVGGTSPGKGGTEVEITLENGETVK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PV+ TV EAK +T A ASVIYVPP+ A D+I+E+++AE+ L++CITEGIPVLDMV+V Sbjct: 60 LPVYNTVEEAKAKTGATASVIYVPPAFAADSILEAVDAEMDLVICITEGIPVLDMVKVSR 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 LE +RLIGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAV Q + G+ Sbjct: 120 YLEGKKTRLIGPNCPGVITPGECKIGIMPGYIHTPGHVGVVSRSGTLTYEAVHQLTARGI 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQS+AVGIGGDPVKGTEFIDVL LF D T++++M+GEIGG+AEEEAA+++K Sbjct: 180 GQSSAVGIGGDPVKGTEFIDVLRLFNEDPNTKAVIMIGEIGGTAEEEAAEWIKANM---- 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VGF+ G TAPPG+ MGHAGA+ISGGKG A++KI ++ G+ +AP+PA +G +LV Sbjct: 236 NKPVVGFIGGATAPPGKRMGHAGAIISGGKGTAKEKIAVLEACGVKVAPTPAEMGSTLVS 295 Query: 296 LLGS 299 +L Sbjct: 296 VLEE 299 >gi|308389602|gb|ADO31922.1| putative succinyl-CoA synthetase alpha subunit [Neisseria meningitidis alpha710] gi|325130102|gb|EGC52885.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis OX99.30304] gi|325136105|gb|EGC58714.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis M0579] gi|325202253|gb|ADY97707.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis M01-240149] gi|325207994|gb|ADZ03446.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis NZ-05/33] Length = 296 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 165/300 (55%), Positives = 223/300 (74%), Gaps = 11/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG +N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNVS----KP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVLK 291 >gi|161869872|ref|YP_001599041.1| succinyl-CoA synthetase subunit alpha [Neisseria meningitidis 053442] gi|254804842|ref|YP_003083063.1| succinyl-CoA synthetase alpha chain [Neisseria meningitidis alpha14] gi|261379708|ref|ZP_05984281.1| succinyl-CoA synthetase subunit alpha [Neisseria subflava NJ9703] gi|296314777|ref|ZP_06864718.1| succinyl-CoA synthetase subunit alpha [Neisseria polysaccharea ATCC 43768] gi|161595425|gb|ABX73085.1| succinyl-CoA synthetase alpha subunit [Neisseria meningitidis 053442] gi|254668384|emb|CBA05494.1| succinyl-CoA synthetase alpha chain [Neisseria meningitidis alpha14] gi|254669448|emb|CBA03310.1| succinyl-CoA synthetase alpha chain [Neisseria meningitidis alpha153] gi|254672883|emb|CBA07162.1| succinyl-CoA synthetase alpha chain [Neisseria meningitidis alpha275] gi|284797375|gb|EFC52722.1| succinyl-CoA synthetase subunit alpha [Neisseria subflava NJ9703] gi|296838420|gb|EFH22358.1| succinyl-CoA synthetase subunit alpha [Neisseria polysaccharea ATCC 43768] gi|309380078|emb|CBX21489.1| unnamed protein product [Neisseria lactamica Y92-1009] gi|319410292|emb|CBY90634.1| succinyl-CoA synthetase alpha chain (SCS-alpha) [Neisseria meningitidis WUE 2594] gi|325132158|gb|EGC54854.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis M6190] gi|325138090|gb|EGC60663.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis ES14902] gi|325204031|gb|ADY99484.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis M01-240355] Length = 296 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 165/301 (54%), Positives = 224/301 (74%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG +N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVLK 291 Query: 299 S 299 + Sbjct: 292 A 292 >gi|298369258|ref|ZP_06980576.1| succinate-CoA ligase, alpha subunit [Neisseria sp. oral taxon 014 str. F0314] gi|298283261|gb|EFI24748.1| succinate-CoA ligase, alpha subunit [Neisseria sp. oral taxon 014 str. F0314] Length = 296 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 165/301 (54%), Positives = 224/301 (74%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG +N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGSTILEVLK 291 Query: 299 S 299 + Sbjct: 292 A 292 >gi|15676853|ref|NP_273998.1| succinyl-CoA synthetase subunit alpha [Neisseria meningitidis MC58] gi|261401147|ref|ZP_05987272.1| succinyl-CoA synthetase subunit alpha [Neisseria lactamica ATCC 23970] gi|313668598|ref|YP_004048882.1| succinyl-CoA synthetase alpha subunit [Neisseria lactamica ST-640] gi|7226200|gb|AAF41366.1| succinyl-CoA synthetase, alpha subunit [Neisseria meningitidis MC58] gi|269208925|gb|EEZ75380.1| succinyl-CoA synthetase subunit alpha [Neisseria lactamica ATCC 23970] gi|313006060|emb|CBN87521.1| putative succinyl-CoA synthetase alpha subunit [Neisseria lactamica 020-06] gi|316985362|gb|EFV64311.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Neisseria meningitidis H44/76] gi|325134124|gb|EGC56776.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis M13399] gi|325140151|gb|EGC62678.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis CU385] gi|325144249|gb|EGC66554.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis M01-240013] gi|325200356|gb|ADY95811.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis H44/76] gi|325206210|gb|ADZ01663.1| succinate-CoA ligase, alpha subunit [Neisseria meningitidis M04-240196] Length = 296 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 165/301 (54%), Positives = 224/301 (74%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG +N+PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGQTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA + T A+ASVIYVP D+I+E++++ + L+V ITEG+P LDM++ K LE Sbjct: 56 TMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNVS----KP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA +G +++E+L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVLK 291 Query: 299 S 299 + Sbjct: 292 A 292 >gi|113461099|ref|YP_719167.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Haemophilus somnus 129PT] gi|112823142|gb|ABI25231.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Haemophilus somnus 129PT] Length = 290 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 173/297 (58%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++KNTKV+ QG TGK GTFH EQA+ Y TQ+VGG+ P K + G +PVF Sbjct: 1 MAILINKNTKVICQGFTGKQGTFHCEQALAY-GTQLVGGVSPGKSGSLHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV E E+T A A++IYVP DAI+E+I+ I IVCITEGIP LDM+ VK +L++S Sbjct: 56 TVREVVEKTGATATMIYVPAPFCKDAILEAIDGGIKFIVCITEGIPTLDMLEVKKKLQQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TP+ CK+GIMPG+I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 DVVMIGPNCPGVITPEECKMGIMPGNIHKKGRIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF AD T++IVM+GEIGGSAEEEAA F+ KP+V Sbjct: 176 VGIGGDPIPGSSFIDILKLFQADPETDAIVMIGEIGGSAEEEAADFIHKHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG AE+KI A+++AG+ S A IG+ L LL Sbjct: 232 AYIAGVTAPKGKRMGHAGAIISGGKGTAEEKIVALEKAGVKTVRSLADIGKVLRTLL 288 >gi|224083892|ref|XP_002307162.1| predicted protein [Populus trichocarpa] gi|222856611|gb|EEE94158.1| predicted protein [Populus trichocarpa] Length = 298 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 182/299 (60%), Positives = 231/299 (77%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF + Sbjct: 3 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNS 57 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS- 120 V+EAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMVRVKA ++K Sbjct: 58 VSEAKAETKANASVIYVPPPFAAAAILEAVEAELDLVVCITEGIPQHDMVRVKAAIKKQT 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G VGI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 118 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D ++ FLAD TE IV++GEIGG+AEE+AA +K+ G +KP+V Sbjct: 178 VGIGGDPFNGTNFVDCVKKFLADPQTEGIVLIGEIGGTAEEDAATLIKE---SGTEKPVV 234 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA++SGGKG A+DKI +++AG+ + SPA+IG +++++ Sbjct: 235 AFIAGVTAPPGRRMGHAGAIVSGGKGTAQDKIKTLRDAGVIVVESPAKIGTAMLDVFKE 293 >gi|254374016|ref|ZP_04989498.1| hypothetical protein FTDG_00176 [Francisella novicida GA99-3548] gi|151571736|gb|EDN37390.1| hypothetical protein FTDG_00176 [Francisella novicida GA99-3548] Length = 290 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKVLVQG TGK GTFH+EQAI Y T +VGG+ P KG T ++ PVF Sbjct: 1 MSVLVDKNTKVLVQGFTGKNGTFHSEQAIAY-GTNIVGGVTPGKGGTTH----LDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA T A+ASVIYVP D+ IE+I++ + L+V ITEG+P LDM+ VK L+ Sbjct: 56 TMAEAVAATGADASVIYVPAPFVKDSAIEAIDSGVKLVVIITEGVPTLDMLVVKEYLKDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT++ G GQST Sbjct: 116 DVRVIGPNCPGVITPGQCKIGIMPGHIHQPGKVGIISRSGTLTYEAVAQTTKLGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G I+ L+L D TE+I+++GEIGG+AEEEAA+++K KP++ Sbjct: 176 IGIGGDPIPGMNQIEALKLLENDPQTEAIILIGEIGGTAEEEAAEYIKHNV----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAPPG+ MGHAGA+ISGGKG AE+K A + AGI SPA IG+ L E+ G Sbjct: 232 GYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAAFEAAGIAYTRSPAEIGKKLKEVTG 289 >gi|225848462|ref|YP_002728625.1| succinate-CoA ligase, subunit alpha subfamily [Sulfurihydrogenibium azorense Az-Fu1] gi|225643231|gb|ACN98281.1| succinate-CoA ligase, alpha subunit subfamily [Sulfurihydrogenibium azorense Az-Fu1] Length = 293 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 167/301 (55%), Positives = 221/301 (73%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KNTKV+VQG+TG+ G+FH Q Y TQVV G+ P K G +PVF Sbjct: 1 MSVLVNKNTKVVVQGITGREGSFHAIQCKAY-GTQVVAGVTPGKKGENVEG----IPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A+ S+I+VPP A DAI+E+++A I ++CITEGIPV DM+ VK ++K Sbjct: 56 TVKEAVEETGADCSLIFVPPPFAADAILEAVDAGIKTVICITEGIPVNDMLPVKQYIKKY 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP+ KIGIMPG IF+KG+VGI+SRSGTLTYEA +Q + G+GQS Sbjct: 116 YPDTVLIGPNCPGVITPEEAKIGIMPGHIFKKGNVGIVSRSGTLTYEAAYQLTTRGIGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDP+ GT F DVL+ F D TE+IVM+GEIGG+AEEEAA+F+K KKP Sbjct: 176 TAVGIGGDPIPGTVFADVLKWFQDDPETEAIVMIGEIGGTAEEEAAEFIKSYV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V ++AG TAPPG+ MGHAGA+I+GGKG A +K A++ AG+ +P+ IG ++ ++L Sbjct: 232 VVAYIAGVTAPPGKRMGHAGAIIAGGKGTAAEKYKALESAGVVTVKNPSIIGETVEKVLK 291 Query: 299 S 299 + Sbjct: 292 N 292 >gi|145627821|ref|ZP_01783622.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae 22.1-21] gi|144979596|gb|EDJ89255.1| succinyl-CoA synthetase alpha subunit [Haemophilus influenzae 22.1-21] Length = 289 Score = 321 bits (822), Expect = 8e-86, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVSPNKGGSSHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP DAIIE+I+A I LIVCITEGIP LDM++VK +L ++ Sbjct: 56 TVREAVENTGATATVIYVPAPFCKDAIIEAIDAGIKLIVCITEGIPTLDMLKVKQKLNET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEE+AA F+KD KP+V Sbjct: 176 VGIGGDPIPGSSFIDILERFQQDPETEAIVMIGEIGGSAEEDAAIFIKDNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A +KI A++ AG+ S A IG +L ++L Sbjct: 232 AYIAGITAPKGKRMGHAGAIISGGKGTAAEKIAALEAAGVTCVKSLAEIGAALRKILK 289 >gi|90021747|ref|YP_527574.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Saccharophagus degradans 2-40] gi|89951347|gb|ABD81362.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Saccharophagus degradans 2-40] Length = 290 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 170/298 (57%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVL QG TG GTFH++QAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVLCQGFTGSQGTFHSQQAIEY-GTQMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA E T A+ASVIYVP D+I+E+ + + L+VCITEGIP LDM+ K + ++ Sbjct: 56 TMAEAVEATGADASVIYVPAPFCKDSILEAAHSGVKLVVCITEGIPTLDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDFGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F DE TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDEKTEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG +L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLAEIGNALKEITG 289 >gi|288819189|ref|YP_003433537.1| succinyl-CoA synthetase alpha subunit [Hydrogenobacter thermophilus TK-6] gi|46849524|dbj|BAD17852.1| succinyl-CoA synthetase small subunit [Hydrogenobacter thermophilus] gi|288788589|dbj|BAI70336.1| succinyl-CoA synthetase alpha subunit [Hydrogenobacter thermophilus TK-6] gi|308752771|gb|ADO46254.1| succinyl-CoA synthetase, alpha subunit [Hydrogenobacter thermophilus TK-6] Length = 293 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 169/299 (56%), Positives = 224/299 (74%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+++TKV+VQG+TGK G+FH Q Y TQVV G+ P KG G +PVF Sbjct: 1 MAILVNRDTKVVVQGITGKEGSFHAAQCKAY-GTQVVAGVTPGKGGQSVEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T AN S+I+VPP+ A DAI+E+++A I LIVCITEG+PV DM+ VK + K+ Sbjct: 56 TVEEAVQETNANCSLIFVPPAFAADAIVEALDAGIELIVCITEGVPVKDMMMVKDYMRKN 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 ++LIGPNCPG++TP K+GIMPG +F++GSVGI+SRSGTLTYEA +Q + GLGQS Sbjct: 116 YPSAKLIGPNCPGVITPGEAKVGIMPGHVFKRGSVGIVSRSGTLTYEAAYQLTMVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV G DV+ +F D TE+I+++GEIGG+AEEEAA+++K KKP Sbjct: 176 TAVGIGGDPVHGLSHKDVISMFNEDPETEAILIIGEIGGTAEEEAAEYIKHHV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + ++AG TAPPGR MGHAGA+ISGG+G A+ K+ A++EAG+ + +PA IG+SL ELL Sbjct: 232 VFAYIAGITAPPGRRMGHAGAIISGGRGTAQAKMQALREAGVYVIENPAFIGKSLQELL 290 >gi|260886824|ref|ZP_05898087.1| succinyl-CoA synthetase subunit alpha [Selenomonas sputigena ATCC 35185] gi|330839370|ref|YP_004413950.1| succinyl-CoA synthetase, alpha subunit [Selenomonas sputigena ATCC 35185] gi|260863423|gb|EEX77923.1| succinyl-CoA synthetase subunit alpha [Selenomonas sputigena ATCC 35185] gi|329747134|gb|AEC00491.1| succinyl-CoA synthetase, alpha subunit [Selenomonas sputigena ATCC 35185] Length = 301 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 161/299 (53%), Positives = 223/299 (74%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DK+TKV+VQG+TGKA TFHT+Q + Y ++V G+ P K G VPVF Sbjct: 1 MSVLIDKDTKVIVQGITGKAATFHTKQMLDY-GAKIVAGVTPGKAGQKVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A ASV+YVPP A D+I+E+++A++ L+VCITE IPVLDMV+V+ +E Sbjct: 56 TVADAVKATGATASVVYVPPRFAADSIMEAVDADLDLVVCITEHIPVLDMVKVRRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG+LT K+GI P ++ + G VG++SRSGTLTYEA FQ + G+GQ+T Sbjct: 116 KTRLVGPNCPGLLTSKQSKLGITPATVSKPGHVGVISRSGTLTYEAAFQLTNAGIGQTTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGT+FID L+LF D T +++++GEIGG+AEE+AA+++++ K KP+ Sbjct: 176 VGIGGDPVKGTDFIDALQLFKDDPDTYAVLIIGEIGGTAEEDAAKWIQENMK---DKPVS 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+ APPG+ MGHAGA+ISGGKG A DK+ A+ AGI +A + A IG ++V+LL Sbjct: 233 AFIAGRQAPPGKRMGHAGAIISGGKGTAADKVAALNAAGIPVADTVAHIGETMVKLLKE 291 >gi|93004946|ref|YP_579383.1| succinyl-CoA synthetase, alpha subunit [Psychrobacter cryohalolentis K5] gi|92392624|gb|ABE73899.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Psychrobacter cryohalolentis K5] Length = 291 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 173/299 (57%), Positives = 217/299 (72%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DK+TKVLVQG TGK GTFH+EQAI Y T+VVGG+ P KG G +PVF Sbjct: 1 MSVLIDKDTKVLVQGFTGKNGTFHSEQAIEY-GTKVVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T++EA T A+ASVIYVP D+IIE+I+A + LIV ITEG+P LDM++ K LE + Sbjct: 56 TMSEAMAATQADASVIYVPAPFVLDSIIEAIDAGVKLIVVITEGVPTLDMLKAKRYLETA 115 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT++ G GQST Sbjct: 116 GDVRLIGPNCPGVITPGQCKIGIMPGHIHLPGKVGIISRSGTLTYEAVAQTTKLGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G ID L+LF D TE+I+++GEIGG+AEEEAA ++KD KP+ Sbjct: 176 CIGIGGDPIPGMNQIDALKLFQEDPQTEAIILIGEIGGTAEEEAAAYIKDHV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VG++AG TAP G+ MGHAGA+ISGG+G AEDK A + AGI P+++G L E+ G Sbjct: 232 VGYIAGVTAPEGKRMGHAGAIISGGQGTAEDKFKAFEAAGIAYTRDPSKLGEKLKEVTG 290 >gi|226945041|ref|YP_002800114.1| Succinyl-CoA ligase subunit alpha [Azotobacter vinelandii DJ] gi|226719968|gb|ACO79139.1| Succinyl-CoA ligase, alpha subunit [Azotobacter vinelandii DJ] Length = 295 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG +++PVF Sbjct: 1 MSILVNKDTKVICQGFTGSQGTFHSEQAIAY-GTRMVGGVTPGKGGLVH----LDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A+ASVIYVP D+I+E+ A + LIVCITEG+P LDM++VK + ++ Sbjct: 56 TVREAVEATGADASVIYVPAPFCKDSILEAAFAGVRLIVCITEGVPTLDMLQVKLKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGI PG+I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIQPGNIHMPGRVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSSFIDILGLFQDDPQTEAIVMIGEIGGSAEEEAAAYIKA----KVDKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPSGKRMGHAGAIISGGKGTADEKFAALQDAGVQTVRSLADIGKALAELTG 289 >gi|320529608|ref|ZP_08030688.1| succinyl-CoA synthetase subunit alpha [Selenomonas artemidis F0399] gi|320138101|gb|EFW30003.1| succinyl-CoA synthetase subunit alpha [Selenomonas artemidis F0399] Length = 301 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 164/299 (54%), Positives = 222/299 (74%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTK +VQG+TGKA FHT Q +L TQ+V G+ P K G VPV+ Sbjct: 1 MSILIDKNTKAIVQGITGKAALFHTRQ-MLDAGTQIVAGVTPGKAGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASVIYVP A D+I+E+++AE+PL++CITE IPVLDMV+V+ ++ Sbjct: 56 TVRDAVKATGANASVIYVPARFAADSIMEAVDAELPLVICITEHIPVLDMVKVRRYMQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG+LTP+ K+GI P S+ + G VG++SRSGTLTYEA FQ + G+GQ+T Sbjct: 116 KTRLLGPNCPGLLTPNQAKLGITPTSVAKPGHVGLVSRSGTLTYEAAFQLTNAGIGQTTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVK +FIDVL+LF AD T ++ ++GEIGG+AEEEAA+++++ +KP+ Sbjct: 176 VGIGGDPVKDMDFIDVLKLFKADPDTLAVFLIGEIGGTAEEEAAKWIRENM---PEKPVA 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+ APPG+ MGHAGA+ISGGKG A DK+ A+ AGI +A + A IG ++V+LL Sbjct: 233 AFIAGRQAPPGKRMGHAGAIISGGKGTAADKVAALNAAGIPVAETVAHIGDTMVKLLKE 291 >gi|54293530|ref|YP_125945.1| succinyl-CoA synthetase, alpha subunit [Legionella pneumophila str. Lens] gi|54296569|ref|YP_122938.1| succinyl-CoA synthetase, alpha subunit [Legionella pneumophila str. Paris] gi|148360809|ref|YP_001252016.1| succinyl CoA synthetase subnit alpha [Legionella pneumophila str. Corby] gi|296106127|ref|YP_003617827.1| succinyl-CoA synthetase alpha chain [Legionella pneumophila 2300/99 Alcoy] gi|53750354|emb|CAH11748.1| succinyl-CoA synthetase, alpha subunit [Legionella pneumophila str. Paris] gi|53753362|emb|CAH14812.1| succinyl-CoA synthetase, alpha subunit [Legionella pneumophila str. Lens] gi|148282582|gb|ABQ56670.1| succinyl CoA synthetase alpha chain [Legionella pneumophila str. Corby] gi|295648028|gb|ADG23875.1| succinyl-CoA synthetase alpha chain [Legionella pneumophila 2300/99 Alcoy] gi|307609342|emb|CBW98827.1| succinyl-CoA synthetase, alpha subunit [Legionella pneumophila 130b] Length = 291 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 179/299 (59%), Positives = 221/299 (73%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDK+TKVL QG TGK GT+HTEQA+ Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLVDKHTKVLCQGFTGKQGTYHTEQALAY-GTKMVGGVTPGKGGQMHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA E T A+ASVIYVP D+IIE+ EA + LIVCITEG+PVLDM++VK +E + Sbjct: 56 TMREAVEETQADASVIYVPAPFCKDSIIEAAEAGVKLIVCITEGVPVLDMLQVKVYIENN 115 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RLIGPNCPGI+TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ +G GQST Sbjct: 116 TQARLIGPNCPGIITPGECKIGIMPGYIHLPGKVGIVSRSGTLTYEAVKQTTDKGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT FID L LF D TE+I+MVGEIGGSAEEEAA+F+K KKP+ Sbjct: 176 CIGIGGDPIPGTSFIDALSLFEKDPKTEAIIMVGEIGGSAEEEAAEFIKSHV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG TAP G+ MGHAGA+ISGGKG A +K A++ AG+ SPA +G ++ E+ G Sbjct: 232 VSYIAGVTAPAGKRMGHAGAIISGGKGTAAEKYAALEAAGVKTVRSPADLGDAIAEVTG 290 >gi|292487656|ref|YP_003530529.1| succinyl-CoA synthetase subunit alpha [Erwinia amylovora CFBP1430] gi|292898893|ref|YP_003538262.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Erwinia amylovora ATCC 49946] gi|291198741|emb|CBJ45850.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Erwinia amylovora ATCC 49946] gi|291553076|emb|CBA20121.1| succinyl-CoA synthetase alpha chain [Erwinia amylovora CFBP1430] gi|312171764|emb|CBX80022.1| succinyl-CoA synthetase alpha chain [Erwinia amylovora ATCC BAA-2158] Length = 290 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 174/297 (58%), Positives = 220/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D I+E+IEA I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDGILEAIEAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP +CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGACKIGIMPGHIHQPGRIGIVSRSGTLTYEAVKQTTDIGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQDDPQTEAIVMIGEIGGSAEEEAAAFIKEYV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVL 288 >gi|259415235|ref|ZP_05739157.1| succinyl-CoA ligase, alpha subunit [Silicibacter sp. TrichCH4B] gi|259349145|gb|EEW60899.1| succinyl-CoA ligase, alpha subunit [Silicibacter sp. TrichCH4B] Length = 295 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 197/299 (65%), Positives = 248/299 (82%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QGLTG GTFHTEQAI Y T++VGG+ P KG ++++PVF Sbjct: 1 MAVLIDENTKVICQGLTGSQGTFHTEQAIAY-GTKMVGGVTPGKGGQ----KHLDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++VK LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVKRALETS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQS+A Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDIGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVL++FL D T+SI+M+GEIGGSAEEEAA+F+ ++ K+GR KPI Sbjct: 176 VGIGGDPIKGTEHIDVLDMFLDDPETQSIIMIGEIGGSAEEEAAEFIAEQKKKGRWKPIA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AMK AGI +A SPA +G ++ + + + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIVVADSPATLGEAVQKAIAN 294 >gi|256822755|ref|YP_003146718.1| succinyl-CoA synthetase subunit alpha [Kangiella koreensis DSM 16069] gi|256796294|gb|ACV26950.1| succinyl-CoA synthetase, alpha subunit [Kangiella koreensis DSM 16069] Length = 290 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 170/298 (57%), Positives = 211/298 (70%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG+TG GTFHTEQAI Y T +VGG+ P KG G +PVF Sbjct: 1 MSILINKDTKVICQGITGSQGTFHTEQAIEY-GTNMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP D+I+E+ I L+VCITEGIP +DM+ K + Sbjct: 56 TVKDAVEATGAEASVIYVPAPFCKDSILEAANGGIKLVVCITEGIPTMDMLEAKIVCDNL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDFGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D ATE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQDDPATEAIVMIGEIGGSAEEEAAAFIKENV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A +K A+++AG+ S A IG L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAAEKFAALEDAGVKTVRSLADIGNGLKEVTG 289 >gi|332374076|gb|AEE62179.1| unknown [Dendroctonus ponderosae] Length = 322 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 173/299 (57%), Positives = 221/299 (73%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + K+TKV+ QG TGK GTFH++Q+I Y T VGG+ P KG G +PVF + Sbjct: 29 NLKIGKHTKVICQGFTGKQGTFHSKQSIEY-GTNFVGGVSPGKGGKTHLG----LPVFDS 83 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAK T ANA++I+VPP GA AI E+++AEI LIV ITEGIP DMV+VK RL + Sbjct: 84 VKEAKTATQANATIIFVPPPGAAKAIHEALDAEIELIVVITEGIPQHDMVKVKHRLVRQD 143 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR++GPNCPGI+ P++CK+GIMPG I +KG VGI+SRSGTLTYEAV QT+Q GLGQ+ Sbjct: 144 KSRMVGPNCPGIIYPEACKMGIMPGFIHQKGKVGIVSRSGTLTYEAVHQTTQSGLGQTLC 203 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID LE+FL D TE IV++GEIGG EE AA++L K + KP+V Sbjct: 204 VGIGGDPFNGTNFIDCLEVFLNDTDTEGIVLIGEIGGMDEENAAEYLAQHNKGSKSKPVV 263 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+ISGGKG AEDK+ A++ G+ + SPA+IG +L+E + + Sbjct: 264 AFIAGMTAPPGRRMGHAGAIISGGKGKAEDKVKALEAVGVKVTRSPAKIGETLLEAMQN 322 >gi|229596684|ref|XP_001007751.3| succinyl-CoA synthetase, alpha subunit family protein [Tetrahymena thermophila] gi|225565165|gb|EAR87506.3| succinyl-CoA synthetase, alpha subunit family protein [Tetrahymena thermophila SB210] Length = 310 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 168/297 (56%), Positives = 217/297 (73%), Gaps = 8/297 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + ++K+TKV+ QG+TG GT HT+QA+ Y T++VGG++P K G +PVF Sbjct: 17 VWINKHTKVICQGITGNQGTLHTQQALEY-GTKMVGGVNPAKAGQTHLG----LPVFKNC 71 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 EAK+ T +ASVIYVPP A AI+E+IEAEIPL+V IT+GIP DMV+VK L + Sbjct: 72 QEAKKVTGCDASVIYVPPPHAAKAIMEAIEAEIPLVVVITDGIPQHDMVKVKHALRQQKI 131 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +R+IGPNCPGI+ P+ CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQST V Sbjct: 132 TRIIGPNCPGIIKPNECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVDQTTKAGLGQSTVV 191 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FIDVLE F+ D TE I+++GEIGG AEE+AA +LK K KP+V Sbjct: 192 GIGGDPFNGTNFIDVLERFVEDPETEGILLIGEIGGEAEEQAAAWLKANNK--TNKPVVS 249 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPP R MGHAGA++SGGKG A +KI A++ AGI + SPA +G+ ++ L+ Sbjct: 250 FIAGVTAPPERRMGHAGAIVSGGKGSATEKIKALESAGIKVCRSPATLGQEMLNLMK 306 >gi|49474815|ref|YP_032857.1| succinyl-CoA synthetase subunit alpha [Bartonella quintana str. Toulouse] gi|49240319|emb|CAF26801.1| Succinyl-CoA synthetase alpha chain [Bartonella quintana str. Toulouse] Length = 300 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 240/298 (80%), Positives = 272/298 (91%), Gaps = 1/298 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGG-NVNVPVF 59 MSIL+ +NTKVLVQGLTGK GTFHTEQA+ Y T++VGGIHPKKG W G ++P+F Sbjct: 1 MSILIHQNTKVLVQGLTGKTGTFHTEQALAYYGTKMVGGIHPKKGGEVWEGSRGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE KERT A+ASVIYVPPSGA DAIIE+IEAEI LIVCITEGIPV+DMVRVK +LE+ Sbjct: 61 ASVAEGKERTGADASVIYVPPSGAADAIIEAIEAEIGLIVCITEGIPVMDMVRVKVKLEQ 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGILTP +CKIGIMPGSIFRKGSVG++SRSGTLTYEAVFQTSQEGLGQ+T Sbjct: 121 SKSRLIGPNCPGILTPHACKIGIMPGSIFRKGSVGVVSRSGTLTYEAVFQTSQEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEFIDVLELFLAD+ TESIVM+GEIGGSAEEEAAQFLKDEAK+GRKKPI Sbjct: 181 AIGIGGDPVKGTEFIDVLELFLADDETESIVMIGEIGGSAEEEAAQFLKDEAKKGRKKPI 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSP++IG++L+ LL Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMESAGIHVSPSPSQIGKTLMVLL 298 >gi|71064687|ref|YP_263414.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Psychrobacter arcticus 273-4] gi|71037672|gb|AAZ17980.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Psychrobacter arcticus 273-4] Length = 291 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 173/299 (57%), Positives = 216/299 (72%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DK+TKVLVQG TGK GTFH+EQAI Y T+VVGG+ P KG G +PVF Sbjct: 1 MSVLIDKDTKVLVQGFTGKNGTFHSEQAIEY-GTKVVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T A+ASVIYVP D+IIE+I+A + LIV ITEG+P LDM++ K LE++ Sbjct: 56 TMNEAMAATQADASVIYVPAPFVLDSIIEAIDAGVKLIVVITEGVPTLDMLKAKRYLEEA 115 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GDVRLIGPNCPGVITPGQCKIGIMPGHIHLPGKVGIISRSGTLTYEAVAQTTTLGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G ID L+LF D TE+I+++GEIGG+AEEEAA ++KD KP+ Sbjct: 176 CIGIGGDPIPGMNQIDALKLFQEDPQTEAIILIGEIGGTAEEEAAAYIKDHV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VG++AG TAP G+ MGHAGA+ISGG+G AEDK A + AGI P+++G L E+ G Sbjct: 232 VGYIAGVTAPEGKRMGHAGAIISGGQGTAEDKFKAFEAAGIAYTRDPSKLGEKLKEVTG 290 >gi|332976752|gb|EGK13583.1| succinyl-CoA synthetase subunit alpha [Desmospora sp. 8437] Length = 310 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 174/304 (57%), Positives = 225/304 (74%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K+TKV+ QG+TGK G FHT+ + Y V G + P KG T G + Sbjct: 1 MSIFINKDTKVITQGITGKTGLFHTKGGLEYGTQMVAGAV-PGKGGTQVEITLDNGEIKS 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TVAEAKE+T ANASVIYVPP+ A DAI+E+++A++ L++CITEGIPV+DMV+V Sbjct: 60 VPVFDTVAEAKEKTGANASVIYVPPAFAADAIMEAVDADLDLVICITEGIPVMDMVKVNR 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +E +RLIGPNCPG++TP KIGIMPG I G VG++SRSGTLTYEAV Q +Q G+ Sbjct: 120 YMEGKRTRLIGPNCPGVITPGESKIGIMPGYIHTPGRVGVVSRSGTLTYEAVHQLTQRGI 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQSTAVGIGGDPV GT FIDVLE F D T +++M+GEIGG+AEEEAA ++K Sbjct: 180 GQSTAVGIGGDPVNGTNFIDVLEQFQQDPDTSAVIMIGEIGGTAEEEAADWIKANM---- 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VGF+ G+TAPPG+ MGHAGA+ISGGKG A++K+ ++ G+ +AP+PA IG +LV Sbjct: 236 TKPVVGFIGGQTAPPGKRMGHAGAIISGGKGTAKEKVAKLEACGVAVAPTPADIGETLVR 295 Query: 296 LLGS 299 +L Sbjct: 296 VLKE 299 >gi|292669155|ref|ZP_06602581.1| succinyl-CoA synthetase subunit alpha [Selenomonas noxia ATCC 43541] gi|292649207|gb|EFF67179.1| succinyl-CoA synthetase subunit alpha [Selenomonas noxia ATCC 43541] Length = 301 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 165/299 (55%), Positives = 216/299 (72%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DK+TKV+VQG+TG A FHTEQ + Y TQ+V G+ P K G VPVF Sbjct: 1 MSVLIDKDTKVIVQGITGTAAMFHTEQMLKY-GTQIVAGVTPGKAGQTALG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A SVIYVP A DAI+E+I+AE+ L+VCITE IPVLDMV+V+ + Sbjct: 56 TVKDAVDATGATVSVIYVPARFAADAILEAIDAELDLVVCITENIPVLDMVKVRRYMRGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R +GPNCPG+LT K+GI PGS+ + G VG++SRSGTLTYEA FQ + G+GQ+T Sbjct: 116 KTRFLGPNCPGLLTSGQSKVGITPGSVSKPGHVGLVSRSGTLTYEAAFQLTNAGIGQTTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKG +FIDVL+LF D T +++M+GEIGG+AEEEAA ++K+ KP+ Sbjct: 176 VGIGGDPVKGLDFIDVLQLFRDDPDTYAVLMIGEIGGTAEEEAAAWIKENM---PDKPVG 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+ APPG+ MGHAGA+ISGGKG A DK+ A+ AGI +A + A IG ++V+LL Sbjct: 233 AFIAGRQAPPGKRMGHAGAIISGGKGTAADKVAALNAAGIPVAETVAHIGETMVKLLKD 291 >gi|251792226|ref|YP_003006947.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Aggregatibacter aphrophilus NJ8700] gi|247533614|gb|ACS96860.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Aggregatibacter aphrophilus NJ8700] Length = 292 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NTKV+ QG TG GTFH++QA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDNNTKVICQGFTGGQGTFHSQQALAY-GTKLVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A A A+VIYVP G DAI+E+I+A I LIVCITEGIP LDM+ VK RL ++ Sbjct: 56 TVRDAVRAIGATATVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMLVVKQRLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPEECKIGIMPGDIHKKGKIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ F+D+L+LF D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFVDILKLFQEDPQTEAIVMIGEIGGSAEEEAAVFIKQHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG A++K A++ AG+ S A+IG +L E L Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFVALEAAGVKTVRSLAQIGAALREALNK 290 >gi|170717676|ref|YP_001784751.1| succinyl-CoA synthetase, subunit alpha [Haemophilus somnus 2336] gi|168825805|gb|ACA31176.1| succinyl-CoA synthetase, alpha subunit [Haemophilus somnus 2336] Length = 290 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 174/297 (58%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++KNTKV+ QG TGK GTFH EQA+ Y TQ+VGG+ P K + G +PVF Sbjct: 1 MAILINKNTKVICQGFTGKQGTFHCEQALAY-GTQLVGGVSPGKSGSLHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A A++IYVP DAI+E+I+ I IVCITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVEKTGATATMIYVPAPFCKDAILEAIDGGIKFIVCITEGIPTLDMLEVKKKLQQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TP+ CK+GIMPG+I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 DVVMIGPNCPGVITPEECKMGIMPGNIHKKGRIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF AD T++IVM+GEIGGSAEEEAA F+ KP+V Sbjct: 176 VGIGGDPIPGSSFIDILKLFQADPETDAIVMIGEIGGSAEEEAADFIHKHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+ISGGKG AE+KI A+++AG+ S A IG+ L LL Sbjct: 232 AYIAGVTAPKGKRMGHAGAIISGGKGTAEEKIVALEKAGVKTVRSLADIGKVLRTLL 288 >gi|308488187|ref|XP_003106288.1| hypothetical protein CRE_15309 [Caenorhabditis remanei] gi|308254278|gb|EFO98230.1| hypothetical protein CRE_15309 [Caenorhabditis remanei] Length = 322 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 178/297 (59%), Positives = 229/297 (77%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+VQG TGK GTFH +Q + Y +T+VVGG++ K T G +PVF T Sbjct: 27 NLKINKDTKVIVQGFTGKQGTFHGKQMLEY-KTKVVGGVNANKAGTEHLG----LPVFKT 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 V EA+ +T A+A+VIYVPPSGA +AI E+++AEIPL+VCITEGIP DMVRVK L+++ Sbjct: 82 VTEARNKTGADATVIYVPPSGAANAIEEAMDAEIPLVVCITEGIPQHDMVRVKSRLLKQN 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ D CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q G GQ+ Sbjct: 142 KTRLVGPNCPGIIASDECKIGIMPGHIHKKGCIGIVSRSGTLTYEAVHQTTQVGFGQTLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+++GEIGGSAEEEAAQFLK+ +KP+V Sbjct: 202 VGIGGDPFNGTNFIDCLQVFLEDPETKGIILIGEIGGSAEEEAAQFLKEHNSGKTRKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKG A DKINA++EAG+ + SPA++G S+ Sbjct: 262 SFIAGVTAPPGRRMGHAGAIISGGKGTAADKINALREAGVIVTDSPAKLGTSMATAF 318 >gi|92113347|ref|YP_573275.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Chromohalobacter salexigens DSM 3043] gi|91796437|gb|ABE58576.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Chromohalobacter salexigens DSM 3043] Length = 290 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 214/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILIDKSTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+ A I LIVCITEGIP LDM+ VK + ++ Sbjct: 56 TVKEAVETTGAEASVIYVPAPFCKDSILEAANAGIKLIVCITEGIPTLDMLDVKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP KIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGETKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDHGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSTFIDMLEMFEKDPQTEAIVMIGEIGGTAEEEAAAYIKEHVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIIAGGKGTADEKFAALESAGVKTVRSLAEIGDALKAATG 289 >gi|161831593|ref|YP_001597237.1| succinate-CoA ligase (ADP-forming), alpha subunit [Coxiella burnetii RSA 331] gi|161763460|gb|ABX79102.1| succinate-CoA ligase (ADP-forming), alpha subunit [Coxiella burnetii RSA 331] Length = 294 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 224/299 (74%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK T+VL QG TGK GTFH+EQAI Y TQ+VGG+ P KG G +P+F Sbjct: 1 MSILIDKETRVLCQGFTGKQGTFHSEQAIEY-GTQMVGGVTPGKGGQSHLG----LPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E T+A+A++I+VP D+IIE+++A + L+VCITEGIPVLDM+ VKA L + Sbjct: 56 SVHEAVEETSADATMIFVPAPFCKDSIIEAVDAGVRLVVCITEGIPVLDMLEVKAYLRQH 115 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPNCPG++TP CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q G GQST Sbjct: 116 PDVRMIGPNCPGVITPGECKIGIMPGHIHQRGKVGIVSRSGTLTYEAVNQTTQMGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT FI VLE+F D T++IVMVGEIGG+AEEEAA+F++ KKP+ Sbjct: 176 CVGIGGDPIPGTSFIGVLEMFEKDSQTQAIVMVGEIGGTAEEEAAEFIQSNV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + ++AG TAPPG+ MGHAGA+I+GGKG A DK A++ AG+ + SPA IG+ + E G Sbjct: 232 ISYIAGVTAPPGKRMGHAGAIIAGGKGTAADKYAALEAAGVFVVKSPAEIGKGVAEATG 290 >gi|332977242|gb|EGK14037.1| succinyl-CoA synthetase subunit alpha [Psychrobacter sp. 1501(2011)] Length = 291 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 169/299 (56%), Positives = 221/299 (73%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DK+TKVLVQG TGK GTFH+EQAI Y T+VVGG+ P KG G +PVF Sbjct: 1 MSVLIDKDTKVLVQGFTGKNGTFHSEQAIEY-GTKVVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA E T A+ASVIYVP D+IIE+++A + LIV ITEG+P LDM++ K +E++ Sbjct: 56 TMAEAMEATNADASVIYVPAPFVLDSIIEAVDAGVKLIVVITEGVPTLDMLKAKRYIEEA 115 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +++GPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT++ G GQST Sbjct: 116 GDVKMVGPNCPGVITPGQCKIGIMPGHIHLPGKVGIISRSGTLTYEAVAQTTKLGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G ID L++F D TE+IV++GEIGG+AEEEAA ++K+ KP+ Sbjct: 176 CIGIGGDPIPGMNQIDCLKMFQEDPQTEAIVLIGEIGGTAEEEAAAYIKEHV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +G++AG TAP G+ MGHAGA+ISGGKG AE+K A +EAGI P++IG ++ E+ G Sbjct: 232 IGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFKAFEEAGIAYTRDPSKIGETVKEVTG 290 >gi|319407857|emb|CBI81510.1| succinyl-CoA synthetase, alpha chain [Bartonella sp. 1-1C] Length = 300 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 235/299 (78%), Positives = 269/299 (89%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSIL++K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGI+PKKG W G +P+F Sbjct: 1 MSILINKDTKVLVQGLTGKTGTFHTEQALAYHGTQMVGGINPKKGGETWKGSKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V E KE+T A+ASVIYVPP+GA DAIIE+IEAEI LIVCITEGIPV+DMV+VKA+LE+ Sbjct: 61 ASVVEGKEKTGADASVIYVPPAGAADAIIEAIEAEIGLIVCITEGIPVMDMVKVKAKLEQ 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGILTPD CKIGIMPGSIFRKGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLIGPNCPGILTPDECKIGIMPGSIFRKGSVGVVSRSGTLTYEAVFQTSHEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEFIDVLE+FLAD TESIVM+GEIGGSAEE AAQFLKDEAK+GRKKP+ Sbjct: 181 AIGIGGDPVKGTEFIDVLEMFLADNETESIVMIGEIGGSAEEAAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSP++IG++LVE L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMEAAGIRVSPSPSQIGKTLVEELK 299 >gi|15604297|ref|NP_220813.1| succinyl-CoA synthetase subunit alpha [Rickettsia prowazekii str. Madrid E] gi|3915042|sp|O08371|SUCD_RICPR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|2073501|emb|CAA72446.1| succinyl-CoA synthetase alpha-subunit [Rickettsia prowazekii] gi|3860989|emb|CAA14889.1| SUCCINYL-COA LIGASE (sucD) [Rickettsia prowazekii] Length = 292 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 180/300 (60%), Positives = 230/300 (76%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K TKV+ QG TG GTFH+EQAI Y T +VGG+ P KG +N+PV+ Sbjct: 1 MAILINKKTKVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGHTH----LNLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+A+I ++VCITEGIPVLDM++VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAKIEVVVCITEGIPVLDMIKVKRALIGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKIGDIGIVSRSGTLTYEAVAQTTAAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +E+FL D+ T++I+M+GEIGGSAEE+AA F+K KKPIV Sbjct: 176 VGIGGDPVNGTSFVDCIEMFLQDDETKAIIMIGEIGGSAEEDAADFIKQSKI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAP + MGHAGA+ISGGKG AEDK+ ++ AG+ I SPA IG+++++LL + Sbjct: 233 SFIAGITAPADKRMGHAGAIISGGKGSAEDKVEVLQSAGVIITRSPADIGKTMLDLLNKI 292 >gi|70729112|ref|YP_258848.1| succinyl-CoA synthetase subunit alpha [Pseudomonas fluorescens Pf-5] gi|68343411|gb|AAY91017.1| succinyl-CoA synthetase, alpha subunit [Pseudomonas fluorescens Pf-5] Length = 293 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 170/298 (57%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG+TG G+FHT+QAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGITGSQGSFHTQQAIEY-GTKMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP D+I+E+ I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKDAVAATGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVTLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|308173572|ref|YP_003920277.1| succinyl-CoA synthetase subunit alpha [Bacillus amyloliquefaciens DSM 7] gi|307606436|emb|CBI42807.1| succinyl-CoA synthetase (alpha subunit) [Bacillus amyloliquefaciens DSM 7] Length = 300 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 173/299 (57%), Positives = 226/299 (75%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+T+V+VQG+TG FHT+Q + Y T +VGG+ P KG T G VPVF Sbjct: 1 MSVFINKDTRVIVQGITGSTALFHTKQMLEY-GTNIVGGVTPGKGGTEAEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A+ASVIYVP A DAI+E+++A+I L++CITE IPVLDMV+VK +E Sbjct: 56 TVAEAVHTTGADASVIYVPAPFAADAIMEAVDAKIDLVICITEHIPVLDMVKVKRFMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S+ G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGVGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPETHAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ GKTAPPG+ MGHAGA+ISGGKG AE+K+ M GI +A +P+ +G +L+++L Sbjct: 232 GFIGGKTAPPGKRMGHAGAIISGGKGTAEEKVKTMNACGIEVAETPSVMGETLIKVLKE 290 >gi|118590557|ref|ZP_01547959.1| succinyl-CoA synthetase subunit alpha [Stappia aggregata IAM 12614] gi|118437020|gb|EAV43659.1| succinyl-CoA synthetase subunit alpha [Stappia aggregata IAM 12614] Length = 302 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 223/301 (74%), Positives = 268/301 (89%), Gaps = 3/301 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGG---NVNVP 57 MSILV+K+TK++VQGLTGK GTFHTEQA+ Y T++V G+HPKKG W+ G ++P Sbjct: 1 MSILVNKDTKIIVQGLTGKTGTFHTEQALEYYGTKMVAGVHPKKGGETWSSGVDSAASLP 60 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 ++ +V EA+E T A+ASVIYVPP+GAG AIIE+IEAE+P IVCITEGIPV DMV+VKA+L Sbjct: 61 IYASVGEAREATGADASVIYVPPAGAGAAIIEAIEAEVPFIVCITEGIPVADMVKVKAKL 120 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 EKS SRL+GPNCPGILTP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQT+ GLGQ Sbjct: 121 EKSKSRLLGPNCPGILTPEECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTTNAGLGQ 180 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 +TAVGIGGDPVKGTEFIDVLE+FLAD+ T+SI+M+GEIGGSAEE+AAQFLKDEAKRGR K Sbjct: 181 TTAVGIGGDPVKGTEFIDVLEMFLADDETQSIIMIGEIGGSAEEDAAQFLKDEAKRGRSK 240 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+ GF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G +L+E+L Sbjct: 241 PMAGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMEAAGIKVSPSPAKLGETLLEVL 300 Query: 298 G 298 Sbjct: 301 K 301 >gi|253996050|ref|YP_003048114.1| succinyl-CoA synthetase subunit alpha [Methylotenera mobilis JLW8] gi|253982729|gb|ACT47587.1| succinyl-CoA synthetase, alpha subunit [Methylotenera mobilis JLW8] Length = 293 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 179/297 (60%), Positives = 225/297 (75%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKVL QG TGK GTFH+EQA+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILVNKNTKVLCQGFTGKQGTFHSEQALAY-GTQMVGGVTPGKGGQLHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A T ANASVIYVPP+ A D+I+E+ +A I LI+CITEGIPVLDM+ VKA L+ + Sbjct: 56 TMRDAVRTTGANASVIYVPPAFAADSILEASDAGIELIICITEGIPVLDMLNVKAALKAN 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TPD CKIGIMPGSI +G VG++SRSGTLTYEAV QT+ LGQST Sbjct: 116 GTRLIGPNCPGVITPDECKIGIMPGSIHLRGKVGVVSRSGTLTYEAVHQTTALNLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KG FI+ LE+F AD TE+I+MVGEIGGS EE AA+F+K + KP+ Sbjct: 176 VGIGGDPIKGLNFIECLEMFEADPETEAIIMVGEIGGSDEEAAAEFIKSNVR----KPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG+TAP G+ MGHAGA+ISGG G A DKI A++ AG +A SPA +G +++ + Sbjct: 232 AYIAGQTAPAGKRMGHAGAIISGGSGKAADKIRALELAGAVVASSPAGLGEAVLAAM 288 >gi|268581731|ref|XP_002645849.1| Hypothetical protein CBG07585 [Caenorhabditis briggsae] Length = 344 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 178/297 (59%), Positives = 226/297 (76%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+VQG TGK GTFH +Q I Y +T VVGG++ K T G +PVF Sbjct: 49 NLKINKDTKVIVQGFTGKQGTFHGKQMIDY-KTNVVGGVNANKAGTQHLG----LPVFKN 103 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 V EA+ +T A+ASVIYVP S A +AI E+++AEIPL+VCITEGIP DMVRVK L+++ Sbjct: 104 VTEARNKTGADASVIYVPASAAANAIEEAMDAEIPLVVCITEGIPQHDMVRVKSRLLKQN 163 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI++ D CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q G GQ+ Sbjct: 164 KTRLVGPNCPGIISADQCKIGIMPGHIHKRGCIGIVSRSGTLTYEAVHQTTQVGFGQTLC 223 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL D T+ I+++GEIGGSAEEEAAQFLKD KKP+V Sbjct: 224 VGIGGDPFNGTNFIDCLHVFLEDPETKGIILIGEIGGSAEEEAAQFLKDHNTGVNKKPVV 283 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKG A DKINA++EAG+ + SPA++G S+ + Sbjct: 284 SFIAGVTAPPGRRMGHAGAIISGGKGTAADKINALREAGVVVTDSPAKLGTSMAKAF 340 >gi|77457845|ref|YP_347350.1| succinyl-CoA synthetase subunit alpha [Pseudomonas fluorescens Pf0-1] gi|77381848|gb|ABA73361.1| succinyl-CoA synthetase alpha chain [Pseudomonas fluorescens Pf0-1] Length = 294 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T +N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGAQGTFHSEQAIAY-GTKMVGGVTPGKGGTTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+ I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKEAVEATGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVTLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|291279314|ref|YP_003496149.1| succinyl-CoA synthase subunit alpha [Deferribacter desulfuricans SSM1] gi|290754016|dbj|BAI80393.1| succinyl-CoA synthase, alpha subunit [Deferribacter desulfuricans SSM1] Length = 290 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 157/299 (52%), Positives = 219/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+VQG+TG+ G+FH EQ + Y T++VGG+ P KG T G VPVF Sbjct: 1 MSILVNKDTKVIVQGITGREGSFHAEQCMAY-GTKIVGGVTPGKGGTEHLG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A S+++VPP+ DAI+E+ +A I LIV ITEG PV DM+ K L+ Sbjct: 56 TVEEAVKTTGATVSLVFVPPAFVADAIMEAADAGIELIVAITEGTPVKDMMYAKEYLKHR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+TP+ CKIGIMPG IF+KG VG++S+SGTLTYEA Q ++GLG STA Sbjct: 116 KVKMIGPNCPGIITPEECKIGIMPGFIFKKGPVGLISKSGTLTYEASNQIVKQGLGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L++F D T++IVM+GEIGG E +AA+++K+ KP+V Sbjct: 176 VGIGGDPIIGLSYKELLQMFEEDPETKAIVMIGEIGGDLEIQAAEYIKENIS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP G+ MGHAGA++SG KG A++K++A+ AG+ + SPA IG ++ ++L + Sbjct: 232 AFIAGQTAPKGKRMGHAGAIVSGSKGTAKEKMDALSAAGVHVVVSPAEIGETVAKVLSN 290 >gi|317047348|ref|YP_004114996.1| succinyl-CoA synthetase subunit alpha [Pantoea sp. At-9b] gi|316948965|gb|ADU68440.1| succinyl-CoA synthetase, alpha subunit [Pantoea sp. At-9b] Length = 291 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 172/299 (57%), Positives = 218/299 (72%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDGILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGRVGIVSRSGTLTYEAVKQTTDIGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQEDPQTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L + Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVLPA 290 >gi|218781621|ref|YP_002432939.1| succinyl-CoA synthetase, alpha subunit [Desulfatibacillum alkenivorans AK-01] gi|218763005|gb|ACL05471.1| Succinyl co-A ligase (ADP-forming), alpha subunit [Desulfatibacillum alkenivorans AK-01] Length = 289 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 217/298 (72%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI V+K+TKV+VQG+TGK G FHT Q I Y T++V G+ P KG +VPVF Sbjct: 1 MSIFVNKDTKVVVQGITGKEGQFHTRQCIEY-GTKIVAGVTPGKGGQKMD----DVPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E AN S+I+VPP A DAI+E+I+AE+ L+V ITEGIPVLDM++VK L KS Sbjct: 56 SVYEAVEGAGANCSMIFVPPPFAADAILEAIDAEVDLVVAITEGIPVLDMMKVKNHLAKS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS-VGILSRSGTLTYEAVFQTSQEGLGQST 179 +RLIGPNCPG++TP CK+GIMPG I + G +G++SRSGTLTYE V Q +Q+G+GQ+T Sbjct: 116 KTRLIGPNCPGVITPGECKLGIMPGKIHKPGGPIGVVSRSGTLTYEVVHQLTQQGMGQTT 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FIDVL F AD T+ IVMVGEIGGSAEEEAA+F+K K P+ Sbjct: 176 CIGIGGDPVNGTNFIDVLSAFEADPETKGIVMVGEIGGSAEEEAAEFIKAN----LKIPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG TAPPGR MGHAGA+ISG G A+ KI AMK+AGI + + +G E+ Sbjct: 232 VGFIAGLTAPPGRRMGHAGAIISGSSGTAQAKIEAMKDAGIHVCENLGTLGELCKEVF 289 >gi|330973463|gb|EGH73529.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. aceris str. M302273PT] Length = 293 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T +N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+ + I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVDTTGATASVIYVPAPFCKDSILEAAFSGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVVLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|28869405|ref|NP_792024.1| succinyl-CoA synthase subunit alpha [Pseudomonas syringae pv. tomato str. DC3000] gi|213968180|ref|ZP_03396325.1| succinyl-CoA synthase, alpha subunit [Pseudomonas syringae pv. tomato T1] gi|301383815|ref|ZP_07232233.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. tomato Max13] gi|302059593|ref|ZP_07251134.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. tomato K40] gi|302133382|ref|ZP_07259372.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28852646|gb|AAO55719.1| succinyl-CoA synthase, alpha subunit [Pseudomonas syringae pv. tomato str. DC3000] gi|213927160|gb|EEB60710.1| succinyl-CoA synthase, alpha subunit [Pseudomonas syringae pv. tomato T1] gi|330875692|gb|EGH09841.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|331018593|gb|EGH98649.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 293 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T +N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVDTTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVILIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|110834353|ref|YP_693212.1| succinyl-CoA synthetase subunit alpha [Alcanivorax borkumensis SK2] gi|110647464|emb|CAL16940.1| succinyl-CoA synthetase, alpha subunit [Alcanivorax borkumensis SK2] Length = 291 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 170/299 (56%), Positives = 213/299 (71%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GT H+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGSQGTLHSEQAIEY-GTQMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EK 119 TVAEA T A ASVIYVP D+I+E+ +A I LIVCITEG+P LDM+ VK + K Sbjct: 56 TVAEAVAETGATASVIYVPAPFCKDSILEAADAGIELIVCITEGVPALDMLFVKEYISRK 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT++ G GQS+ Sbjct: 116 DGIRLIGPNCPGVITPGECKIGIMPGHIHTPGKVGIVSRSGTLTYEAVNQTTKLGFGQSS 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G FID LELF D TE+IVMVGEIGG+AE+EAA ++K+ KP+ Sbjct: 176 CIGIGGDPIPGMTFIDALELFQNDPQTEAIVMVGEIGGTAEDEAAAYIKEHV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG TAP G+ MGHAGA+I+GGKG A++K ++ AG+ +PA IG+++ E G Sbjct: 232 VSYIAGVTAPAGKRMGHAGAIIAGGKGTADEKFAVLEAAGVKTVRNPAEIGKAVKEATG 290 >gi|50085912|ref|YP_047422.1| succinyl-CoA synthetase subunit alpha [Acinetobacter sp. ADP1] gi|49531888|emb|CAG69600.1| succinyl-CoA synthetase alpha chain [Acinetobacter sp. ADP1] Length = 296 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 162/301 (53%), Positives = 222/301 (73%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T +++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSAQALDY-GTKVVGGVTPGKGGTTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ +A T A+ASVIYVP D+I+E++++ + LIV ITEG+P LDM++ K LE Sbjct: 56 TMKDAVRETGADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTLDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQDDPDTDAIIMIGEIGGTAEEEAAEYIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A + AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFERAGMAYTRSPAELGSTMLQVLK 291 Query: 299 S 299 Sbjct: 292 E 292 >gi|311068131|ref|YP_003973054.1| succinyl-CoA synthetase subunit alpha [Bacillus atrophaeus 1942] gi|310868648|gb|ADP32123.1| succinyl-CoA synthetase subunit alpha [Bacillus atrophaeus 1942] Length = 300 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 173/299 (57%), Positives = 227/299 (75%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ V+K+T+V+VQG+TG FHT+Q + Y T +VGG+ P KG T G VPVF Sbjct: 1 MSVFVNKDTRVIVQGITGSTALFHTKQMLEY-GTNIVGGVTPGKGGTEAEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A T ANASVIYVP + A DAI+E+++AE+ L++CITE IPVLDMV+VK +E Sbjct: 56 TVADAVHTTGANASVIYVPAAFAADAIMEAVDAELDLVICITEHIPVLDMVKVKRFMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S+ G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGVGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPETHAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ GKTAPPG+ MGHAGA+ISGGKG A++KI + GI +A +P+ +G +L+++L Sbjct: 232 GFIGGKTAPPGKRMGHAGAIISGGKGTADEKIKTLNACGIEVAETPSVMGETLIKVLKE 290 >gi|237808970|ref|YP_002893410.1| succinyl-CoA synthetase, alpha subunit [Tolumonas auensis DSM 9187] gi|237501231|gb|ACQ93824.1| succinyl-CoA synthetase, alpha subunit [Tolumonas auensis DSM 9187] Length = 291 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 175/298 (58%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MSILINKETKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVSPGKGGSTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP DAI+E+I+A I LIVCITEGIP LDM++VK RL+++ Sbjct: 56 TVRDAVETTGATASVIYVPAPFCKDAILEAIDAGIQLIVCITEGIPTLDMLQVKCRLDET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMP I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPAHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A +K A++EAG+ S A I L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAAEKFAALEEAGVKTVRSLADIAVGLREVTG 289 >gi|238898947|ref|YP_002924629.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466707|gb|ACQ68481.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 290 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 177/298 (59%), Positives = 220/298 (73%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNTKV+ QG TG GTFH+E AI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILVDKNTKVICQGFTGSQGTFHSEHAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A ASVIYVP D+I+E+I+A I LIVCITEGIP LDM+ VK +L++S Sbjct: 56 TVKEAVLKTGATASVIYVPAPFCKDSILEAIDAGITLIVCITEGIPTLDMLIVKEKLKQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPGI+TP +CKIGIMPG I R G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 HVRMIGPNCPGIITPGACKIGIMPGHIHRPGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L LF D TE+IVM+GEIGG+AEEE A ++K+ KK +V Sbjct: 176 VGIGGDPISGSHFIDILTLFEQDPQTEAIVMIGEIGGNAEEETADYIKN---TSFKKLVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGG+G AE+K A++ AG+ S IG++++ +L Sbjct: 233 AYIAGVTAPKGKRMGHAGAIISGGRGTAEEKFLALEAAGVKTVHSLTDIGQTVINILS 290 >gi|294637431|ref|ZP_06715722.1| succinyl-CoA synthetase subunit alpha [Edwardsiella tarda ATCC 23685] gi|291089424|gb|EFE21985.1| succinyl-CoA synthetase subunit alpha [Edwardsiella tarda ATCC 23685] Length = 290 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 171/299 (57%), Positives = 223/299 (74%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K T+V+ QG TG GTFH+EQA+ Y +Q+VGG+ P KG + G +PVF Sbjct: 1 MSILINKETRVICQGFTGSQGTFHSEQALAY-GSQLVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + TAA+ASVIYVP D+I+E+I+A I LI+CITEGIP DM+ VKA+L++ Sbjct: 56 TVREAVQATAASASVIYVPAPFCKDSILEAIDAGITLIICITEGIPTQDMLLVKAKLDQC 115 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QTS GLGQST Sbjct: 116 PGVRMIGPNCPGVITPGECKIGIMPGHIHQPGRIGIVSRSGTLTYEAVKQTSDVGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ G+ FID+L LF AD T++IVM+GEIGG+AEEEAA ++K KP+ Sbjct: 176 CVGIGGDPIPGSSFIDILALFQADPQTDAIVMIGEIGGNAEEEAAAYIKQHV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG++L+ +LG Sbjct: 232 VAYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVTTVRSLADIGQALLRVLG 290 >gi|302187416|ref|ZP_07264089.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. syringae 642] Length = 293 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T +N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVETTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVVLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|6980727|pdb|1CQI|A Chain A, Crystal Structure Of The Complex Of Adp And Mg2+ With Dephosphorylated E. Coli Succinyl-Coa Synthetase gi|6980729|pdb|1CQI|D Chain D, Crystal Structure Of The Complex Of Adp And Mg2+ With Dephosphorylated E. Coli Succinyl-Coa Synthetase gi|6980731|pdb|1CQJ|A Chain A, Crystal Structure Of Dephosphorylated E. Coli Succinyl-Coa Synthetase gi|6980733|pdb|1CQJ|D Chain D, Crystal Structure Of Dephosphorylated E. Coli Succinyl-Coa Synthetase Length = 286 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 171/295 (57%), Positives = 216/295 (73%), Gaps = 9/295 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 SIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF T Sbjct: 1 SILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFNT 55 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 VREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST V Sbjct: 116 VRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+VG Sbjct: 176 GIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L + Sbjct: 232 YIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTV 286 >gi|254429340|ref|ZP_05043047.1| succinyl-CoA synthetase, alpha subunit subfamily [Alcanivorax sp. DG881] gi|196195509|gb|EDX90468.1| succinyl-CoA synthetase, alpha subunit subfamily [Alcanivorax sp. DG881] Length = 291 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 169/299 (56%), Positives = 214/299 (71%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GT H+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGSQGTLHSEQAIEY-GTQMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A ASVIYVP D+I+E+ +A I LIVCITEG+P LDM+ VK + + Sbjct: 56 TVAEAVAETGATASVIYVPAPFCKDSILEAADAGIELIVCITEGVPALDMLFVKEYISRM 115 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT++ G GQS+ Sbjct: 116 DGVRLIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVNQTTKLGFGQSS 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G FID LELF D TE+IVMVGEIGG+AE+EAA ++K+ KP+ Sbjct: 176 CIGIGGDPIPGMTFIDALELFQNDPQTEAIVMVGEIGGTAEDEAAAYIKENV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG TAP G+ MGHAGA+I+GGKG A++K ++ AG+ +PA IG+++ E G Sbjct: 232 VSYIAGVTAPAGKRMGHAGAIIAGGKGTADEKFAVLEAAGVKTVRNPAEIGKAVKEATG 290 >gi|157835426|pdb|2NU7|A Chain A, C123as Mutant Of E. Coli Succinyl-Coa Synthetase gi|157835428|pdb|2NU7|D Chain D, C123as Mutant Of E. Coli Succinyl-Coa Synthetase Length = 288 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 171/297 (57%), Positives = 216/297 (72%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 SIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF T Sbjct: 1 SILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFNT 55 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 VREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPN PG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST V Sbjct: 116 VRMIGPNSPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+VG Sbjct: 176 GIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 YIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 288 >gi|312113430|ref|YP_004011026.1| succinyl-CoA synthetase, subunit alpha [Rhodomicrobium vannielii ATCC 17100] gi|311218559|gb|ADP69927.1| succinyl-CoA synthetase, alpha subunit [Rhodomicrobium vannielii ATCC 17100] Length = 291 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 198/298 (66%), Positives = 236/298 (79%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVDKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG + G +PVF Sbjct: 1 MAILVDKNTKVICQGFTGAQGTFHSEQAIAY-GTKMVGGVTPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ++T ANA+ IYVPP A DAI+E+I+AEIPLIV ITEGIPV DM++VK L S Sbjct: 56 TVLDAVQKTGANATAIYVPPPFAADAILEAIDAEIPLIVTITEGIPVEDMIKVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TP CKIGIMPG I ++GSVGI+SRSGTLTYEAV QT+ GLGQ+T Sbjct: 116 KSRLIGPNCPGVITPGECKIGIMPGHIHKRGSVGIVSRSGTLTYEAVHQTTLAGLGQTTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPVKGTE IDVLE+ LAD+ T+SI+M+GEIGGSAEEEAA F RKKPIV Sbjct: 176 IGIGGDPVKGTEHIDVLEMLLADDETQSIIMIGEIGGSAEEEAADF---YRTSSRKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAPPGR MGHAGA+I+GGKG A DKI AMK AGI ++PSPA +G +LVE+L Sbjct: 233 GFIAGVTAPPGRRMGHAGAIIAGGKGSAGDKIEAMKSAGIVVSPSPAALGSTLVEVLK 290 >gi|239636274|ref|ZP_04677276.1| succinate-CoA ligase, alpha subunit family [Staphylococcus warneri L37603] gi|239597629|gb|EEQ80124.1| succinate-CoA ligase, alpha subunit family [Staphylococcus warneri L37603] Length = 301 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 167/296 (56%), Positives = 221/296 (74%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MSVFIDKNTKVIVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK+ T AN SV+YVP A D+I+E+ +AE+ +++CITE IPV+DMV+VK L+ Sbjct: 56 TVEEAKQETGANVSVVYVPAPFAADSILEAADAELDMVICITEHIPVVDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T+++VM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPETKAVVMIGEIGGTAEEEAAEWIKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTASEKIKTLNSCGVETANTPSEIGTTLIEA 287 >gi|70726668|ref|YP_253582.1| succinyl-CoA synthetase subunit alpha [Staphylococcus haemolyticus JCSC1435] gi|68447392|dbj|BAE04976.1| succinyl-CoA synthetase (alpha subunit) [Staphylococcus haemolyticus JCSC1435] Length = 301 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 170/296 (57%), Positives = 225/296 (76%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAKE T AN SV+YVP A D+I+E+ +A++ +++CITE IPV+DMV+VK LE Sbjct: 56 TVAEAKEETGANVSVVYVPAPFAADSILEAADADLDMVICITEHIPVVDMVKVKRYLEGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T+++VM+GEIGG+AEEEAA+++K KP++ Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDEDTKAVVMIGEIGGTAEEEAAEWIKANM----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI + E G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTADEKIKTLNECGVKTADTPSEIGTTLIEA 287 >gi|88608406|ref|YP_506144.1| succinyl-CoA synthetase, alpha subunit [Neorickettsia sennetsu str. Miyayama] gi|88600575|gb|ABD46043.1| succinyl-CoA synthetase, alpha subunit [Neorickettsia sennetsu str. Miyayama] Length = 290 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 181/298 (60%), Positives = 224/298 (75%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+K T+V+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MAILVNKETRVICQGFTGHQGTFHSEQAIEY-GTKMVGGVTPGKGGQMHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A++ T ANA+VIYVP A DAI+E+I+AEI LIVCITEGIPV DM+RVK+ L S Sbjct: 56 TVYHARKETGANATVIYVPAPFAMDAILEAIDAEIELIVCITEGIPVQDMMRVKSALSNS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPGI+TP CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQST Sbjct: 116 KSLLIGPNCPGIITPGECKIGIMPGYIHKRGKIGIVSRSGTLTYEAVAQTTQMGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDPVKG +F+D +++FL D TE+I+M+GEIGGSAEE+A LK KKP V Sbjct: 176 IGVGGDPVKGLDFVDCVKMFLDDPETEAIIMIGEIGGSAEEKACALLKSSQS---KKPTV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAPPGR MGHAGA+IS AE KI MK+AGI IA +PA IG+++ +L+ Sbjct: 233 GFIAGATAPPGRRMGHAGAIISSSDESAESKIKVMKDAGIVIAETPALIGKTVADLIA 290 >gi|120598559|ref|YP_963133.1| succinyl-CoA synthetase subunit alpha [Shewanella sp. W3-18-1] gi|146293362|ref|YP_001183786.1| succinyl-CoA synthetase subunit alpha [Shewanella putrefaciens CN-32] gi|120558652|gb|ABM24579.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella sp. W3-18-1] gi|145565052|gb|ABP75987.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella putrefaciens CN-32] gi|319426664|gb|ADV54738.1| succinyl-CoA synthetase, alpha subunit [Shewanella putrefaciens 200] Length = 290 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 176/298 (59%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH++QAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSQQAIDY-GTQMVGGVSPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVAATGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A DK A++ AG+ S A IG++L G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAADKFAALEAAGVTTVRSLADIGKALRAKTG 289 >gi|56707642|ref|YP_169538.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|110670113|ref|YP_666670.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. tularensis FSC198] gi|118497192|ref|YP_898242.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. novicida U112] gi|134302425|ref|YP_001122395.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. tularensis WY96-3418] gi|187932030|ref|YP_001892015.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Francisella tularensis subsp. mediasiatica FSC147] gi|194323491|ref|ZP_03057268.1| succinyl-CoA synthetase, alpha subunit family [Francisella tularensis subsp. novicida FTE] gi|208778984|ref|ZP_03246330.1| succinyl-CoA synthetase, alpha subunit family [Francisella novicida FTG] gi|224456712|ref|ZP_03665185.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Francisella tularensis subsp. tularensis MA00-2987] gi|254370157|ref|ZP_04986163.1| succinate-CoA ligase [Francisella tularensis subsp. tularensis FSC033] gi|254372557|ref|ZP_04988046.1| hypothetical protein FTCG_00120 [Francisella tularensis subsp. novicida GA99-3549] gi|254874459|ref|ZP_05247169.1| succinyl-CoA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|56604134|emb|CAG45136.1| Succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|110320446|emb|CAL08519.1| Succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. tularensis FSC198] gi|118423098|gb|ABK89488.1| succinyl-CoA synthetase, alpha subunit [Francisella novicida U112] gi|134050202|gb|ABO47273.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. tularensis WY96-3418] gi|151568401|gb|EDN34055.1| succinate-CoA ligase [Francisella tularensis subsp. tularensis FSC033] gi|151570284|gb|EDN35938.1| hypothetical protein FTCG_00120 [Francisella novicida GA99-3549] gi|187712939|gb|ACD31236.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Francisella tularensis subsp. mediasiatica FSC147] gi|194322346|gb|EDX19827.1| succinyl-CoA synthetase, alpha subunit family [Francisella tularensis subsp. novicida FTE] gi|208744784|gb|EDZ91082.1| succinyl-CoA synthetase, alpha subunit family [Francisella novicida FTG] gi|254840458|gb|EET18894.1| succinyl-CoA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158800|gb|ADA78191.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. tularensis NE061598] gi|328675716|gb|AEB28391.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Francisella cf. novicida 3523] gi|328676664|gb|AEB27534.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Francisella cf. novicida Fx1] Length = 290 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKVLVQG TGK GTFH+EQAI Y T +VGG+ P KG T ++ PVF Sbjct: 1 MSVLVDKNTKVLVQGFTGKNGTFHSEQAIAY-GTNIVGGVTPGKGGTTH----LDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA T A+ASVIYVP D+ IE+I++ + L+V ITEG+P LDM+ VK L+ Sbjct: 56 TMAEAVAATGADASVIYVPAPFVKDSAIEAIDSGVKLVVIITEGVPTLDMLVVKEYLKDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPGI+TP CKIGIMPG I KG VGI+SRSGTLTYEAV QT++ G GQST Sbjct: 116 DVRVIGPNCPGIITPGECKIGIMPGHIHMKGKVGIISRSGTLTYEAVAQTTKLGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G I+ L+L D TE+I+++GEIGG+AEEEAA+++K KP++ Sbjct: 176 IGIGGDPIPGMNQIEALKLLENDPQTEAIILIGEIGGTAEEEAAEYIKHNV----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAPPG+ MGHAGA+ISGGKG AE+K A + AGI SPA IG+ L E+ G Sbjct: 232 GYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAAFEAAGIAYTRSPAEIGKKLKEVTG 289 >gi|331004889|ref|ZP_08328306.1| Succinyl-CoA ligase (ADP-forming) alpha chain [gamma proteobacterium IMCC1989] gi|330421343|gb|EGG95592.1| Succinyl-CoA ligase (ADP-forming) alpha chain [gamma proteobacterium IMCC1989] Length = 290 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MSILINKDTKVICQGFTGSNGTFHSEQAIAY-GTQMVGGVTPGKGGSTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP + D+IIE+ +A I LI+ ITEGIP LDM+ VK +EK Sbjct: 56 TVKEAVEATGATATVIYVPAAFCKDSIIEAADAGIELIITITEGIPTLDMLVVKEYVEKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGVVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D ATE+IVM+GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILQMFQDDPATEAIVMIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA++SGGKG A++K A+++AG+ S A IG +L E+ G Sbjct: 232 SYIAGVTAPEGKRMGHAGAIVSGGKGTADEKFAALEDAGVKTVRSLADIGSALKEITG 289 >gi|281206773|gb|EFA80958.1| Endo-beta-N-acetylglucosaminidase [Polysphondylium pallidum PN500] Length = 1362 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 185/298 (62%), Positives = 227/298 (76%), Gaps = 8/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 +LVDKNTKV+ QGL GK GTFHT QAI Y TQ+VGG+ P KG T +P+F +V Sbjct: 27 VLVDKNTKVICQGL-GKQGTFHTLQAIDY-GTQMVGGVSPNKGGTKHEA--TKLPLFNSV 82 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 A+AK T ANASVIYVPP GA DAIIE+IEAE+ LIVCITEGIP DMVRVK L ++ Sbjct: 83 ADAKRETGANASVIYVPPPGAADAIIEAIEAEMELIVCITEGIPQKDMVRVKYLLNRQNK 142 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST V Sbjct: 143 TRLIGPNCPGIIKPGECKIGIMPGHIHRPGKIGIVSRSGTLTYEAVAQTTAVGLGQSTCV 202 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D L+LF D TE I+++GEIGG AEEEAAQ+L++ KP+V Sbjct: 203 GIGGDPFNGTNFVDCLKLFTKDPQTEGIILIGEIGGEAEEEAAQWLREN---PTDKPVVS 259 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+ISGGKGGA+ K+ A+++AG+ ++ SPA++G +++E + Sbjct: 260 FIAGLTAPPGRRMGHAGAIISGGKGGADSKMKALQDAGVIMSLSPAKLGTTMLEAMNR 317 >gi|325578256|ref|ZP_08148391.1| succinyl-CoA synthetase subunit alpha [Haemophilus parainfluenzae ATCC 33392] gi|325159992|gb|EGC72121.1| succinyl-CoA synthetase subunit alpha [Haemophilus parainfluenzae ATCC 33392] Length = 289 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K TKV+ QG TG GTFH+EQA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MAILINKETKVICQGFTGAQGTFHSEQALAY-GTKLVGGVSPNKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A A++IYVP DAI+E+I+A I L+VCITEGIP LDM+ VK +L ++ Sbjct: 56 TVREAVQVTGATATMIYVPAPFCKDAILEAIDAGIQLVVCITEGIPTLDMLLVKQKLIET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TPD CKIGIMPG+I +KG VGI+SRSGTLTYE V QT+ EG GQST Sbjct: 116 GVVMIGPNCPGVITPDECKIGIMPGNIHKKGRVGIVSRSGTLTYEVVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+ F D TE+IVM+GEIGGSAEEEAA F+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKRFQEDPETEAIVMIGEIGGSAEEEAAAFITAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A DKI A++ AG+ S A IG +L ELL Sbjct: 232 AYIAGVTAPKGKRMGHAGAIISGGKGTAADKIAALEAAGVKTVRSLAEIGSALHELLK 289 >gi|157835430|pdb|2NU8|A Chain A, C123at Mutant Of E. Coli Succinyl-Coa Synthetase gi|157835432|pdb|2NU8|D Chain D, C123at Mutant Of E. Coli Succinyl-Coa Synthetase Length = 288 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 171/297 (57%), Positives = 216/297 (72%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 SIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF T Sbjct: 1 SILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFNT 55 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 VREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPN PG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST V Sbjct: 116 VRMIGPNTPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+VG Sbjct: 176 GIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 YIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 288 >gi|85374425|ref|YP_458487.1| succinyl-CoA synthetase, alpha subunit [Erythrobacter litoralis HTCC2594] gi|84787508|gb|ABC63690.1| succinyl-CoA synthetase, alpha subunit [Erythrobacter litoralis HTCC2594] Length = 296 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 203/300 (67%), Positives = 243/300 (81%), Gaps = 5/300 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+ QG+TG GTFHT+QA+ Y TQ+V G+ P KG T G +P F Sbjct: 1 MSILVNKDTKVITQGMTGNTGTFHTQQALDY-GTQMVAGVTPGKGGTEHIG----LPQFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK+ T A AS IYVPP A DAI E+I+A I LI+CITEGIPVLDMVR K L+ S Sbjct: 56 TVREAKDATGATASCIYVPPPFAADAICEAIDAGIELIICITEGIPVLDMVRAKRALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPG+LTPD CKIGIMPGSIF+KGSVG++SRSGTLTYEAV QT+ GLGQSTA Sbjct: 116 NSRLIGPNCPGVLTPDECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVHQTTMVGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+LFL D T+S++M+GEIGGSAEEEAA FLK EA +GR KP V Sbjct: 176 VGIGGDPVNGTNFIDVLDLFLDDPETKSMIMIGEIGGSAEEEAAAFLKAEAAKGRSKPTV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAPPGR MGHAGA++SGGKGGA+DKI AM++AGI ++PSP+ +G +L +L + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGKGGADDKIAAMEDAGIRVSPSPSELGTTLDAMLKEM 295 >gi|261407993|ref|YP_003244234.1| succinyl-CoA synthetase subunit alpha [Paenibacillus sp. Y412MC10] gi|329929342|ref|ZP_08283095.1| succinyl-CoA synthetase, alpha subunit [Paenibacillus sp. HGF5] gi|261284456|gb|ACX66427.1| succinyl-CoA synthetase, alpha subunit [Paenibacillus sp. Y412MC10] gi|328936711|gb|EGG33154.1| succinyl-CoA synthetase, alpha subunit [Paenibacillus sp. HGF5] Length = 309 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 178/304 (58%), Positives = 228/304 (75%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSIL+DKNTKV+ QG+TGK FH + A+ Y TQ+VGG P KG T G V Sbjct: 1 MSILIDKNTKVITQGITGKTALFHAKGALDY-GTQMVGGTSPGKGGTEVEITLENGETVK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PV+ TV EAK +T A ASVIYVPP+ A D+I+E+++AE+ L++CITEGIPVLDMV+V Sbjct: 60 LPVYNTVEEAKAKTGATASVIYVPPAFAADSILEAVDAEMDLVICITEGIPVLDMVKVSR 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +E +RLIGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAV Q + G+ Sbjct: 120 YMEGKKTRLIGPNCPGVITPGECKIGIMPGYIHTPGHVGVVSRSGTLTYEAVHQLTARGI 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQS+AVGIGGDPVKGTEFIDVL LF D T++++M+GEIGG+AEEEAA+++K Sbjct: 180 GQSSAVGIGGDPVKGTEFIDVLRLFNEDPNTKAVIMIGEIGGTAEEEAAEWIKANM---- 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VGF+ G TAPPG+ MGHAGA+ISGGKG A++KI ++ GI +AP+PA +G +LV Sbjct: 236 TKPVVGFIGGATAPPGKRMGHAGAIISGGKGTAKEKIAVLEACGIKVAPTPAEMGSTLVS 295 Query: 296 LLGS 299 +L Sbjct: 296 VLEE 299 >gi|66045253|ref|YP_235094.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. syringae B728a] gi|289679952|ref|ZP_06500842.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. syringae FF5] gi|63255960|gb|AAY37056.1| Succinyl-CoA ligase, alpha subunit [Pseudomonas syringae pv. syringae B728a] gi|330899191|gb|EGH30610.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. japonica str. M301072PT] gi|330940362|gb|EGH43467.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. pisi str. 1704B] gi|330951687|gb|EGH51947.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae Cit 7] Length = 293 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T +N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVDTTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVVLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|118485015|gb|ABK94372.1| unknown [Populus trichocarpa] Length = 331 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 180/298 (60%), Positives = 229/298 (76%), Gaps = 9/298 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF +V Sbjct: 37 VFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNSV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS-S 121 +EAK T ANASVIYV P A AI+E++EAE+ L+VCITEGIP D+VRVKA ++K Sbjct: 92 SEAKAETKANASVIYVTPPFAAAAILEAVEAELDLVVCITEGIPQHDVVRVKAAIKKQSK 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G VGI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 152 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCV 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D ++ FLAD TE IV++GEIGG+AEE+AA +K+ G +KP+V Sbjct: 212 GIGGDPFNGTNFVDCVKKFLADPQTEGIVLIGEIGGTAEEDAATIIKE---SGTEKPVVA 268 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA++SGGKG A+DKI +++AG+ + SPA+IG +++++ Sbjct: 269 FIAGVTAPPGRRMGHAGAIVSGGKGTAQDKIKTLRDAGVIVVESPAKIGTAMLDVFKE 326 >gi|262369430|ref|ZP_06062758.1| succinyl-CoA synthetase subunit alpha [Acinetobacter johnsonii SH046] gi|262315498|gb|EEY96537.1| succinyl-CoA synthetase subunit alpha [Acinetobacter johnsonii SH046] Length = 296 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 165/301 (54%), Positives = 222/301 (73%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T +++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSAQALDY-GTKVVGGVTPGKGGTTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ +A T A+A+VIYVP D+IIE++++ + LIV ITEG+P LDM++ K L+ Sbjct: 56 TMKDAVAGTGADATVIYVPAPFVLDSIIEAVDSGVGLIVVITEGVPTLDMLKAKRYLQTN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RLIGPNCPGI+TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLIGPNCPGIITPGECKIGIMPGHIHQPGKIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D TE+I+M+GEIGG+AEEEAA++++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDCLKLFQEDPQTEAIIMIGEIGGTAEEEAAEYIQSHV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AG+ SPA +G ++ +LL Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGMAYTRSPAELGSTMFQLLK 291 Query: 299 S 299 Sbjct: 292 D 292 >gi|294500950|ref|YP_003564650.1| succinate-CoA ligase subunit alpha [Bacillus megaterium QM B1551] gi|295706296|ref|YP_003599371.1| succinate-CoA ligase subunit alpha [Bacillus megaterium DSM 319] gi|294350887|gb|ADE71216.1| succinate-CoA ligase, alpha subunit [Bacillus megaterium QM B1551] gi|294803955|gb|ADF41021.1| succinate-CoA ligase, alpha subunit [Bacillus megaterium DSM 319] Length = 300 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 233/299 (77%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++++TKV+VQG+TG G FHT+Q + Y T++VGG+ P KG G VPVF Sbjct: 1 MSVFINQDTKVIVQGITGGVGLFHTQQMLEY-GTKIVGGVTPGKGGLEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAKE+T A ASV+YVPP+ A D+IIE+++A++ L++CITEGIPVLDMV+VK +E Sbjct: 56 TVAEAKEKTGATASVVYVPPAFAADSIIEAVDADLDLVICITEGIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S+ G+GQSTA Sbjct: 116 RTRLVGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T +++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDEDTYAVIMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI M E GI +A +P+ +G +L+++L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTASEKIKTMNECGIQVAETPSVMGETLIKVLKE 290 >gi|145344592|ref|XP_001416813.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577039|gb|ABO95106.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 344 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 187/299 (62%), Positives = 230/299 (76%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+VQG TGK GTFH+EQAI Y TQVVGG+ P+KG T +N+PVF T Sbjct: 50 AVFVDKNTRVIVQGFTGKNGTFHSEQAIAY-GTQVVGGVTPRKGGTTH----LNLPVFDT 104 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EAKE T ANASVIYVPP A A++E+IEAE+ L+VCITEGIP DMVRVK L +S Sbjct: 105 VREAKESTKANASVIYVPPPFAARAVMEAIEAEVELVVCITEGIPQHDMVRVKQALMSQS 164 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G VG++SRSGTLTYEAV+QT+ GLGQST Sbjct: 165 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGVVSRSGTLTYEAVYQTTVAGLGQSTC 224 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE I+M+GEIGG+AEEEAA+F++ G +KPIV Sbjct: 225 VGIGGDPFNGTNFVDCLEKFVKDPQTEGIIMIGEIGGTAEEEAAEFIRA---SGTEKPIV 281 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+ISGGKG A DKI A++ G+ + SPA++G+++ E+ G Sbjct: 282 SFIAGLTAPPGRRMGHAGAIISGGKGSAGDKIAALERVGVRVVKSPAKMGQAMYEMFGE 340 >gi|83313058|ref|YP_423322.1| succinyl-CoA synthetase subunit alpha [Magnetospirillum magneticum AMB-1] gi|82947899|dbj|BAE52763.1| Succinyl-CoA synthetase [Magnetospirillum magneticum AMB-1] Length = 291 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 183/298 (61%), Positives = 228/298 (76%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+ NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T +++PVF Sbjct: 1 MAVLVNSNTKVICQGFTGAQGTFHSEQAIAY-GTKMVGGVTPGKGGTTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK +T NASVIYVPP A DAI+E+I+AEI L VCITEGIPV DM+ VK L+ S Sbjct: 56 TVAEAKAKTGCNASVIYVPPPFAADAILEAIDAEIELAVCITEGIPVADMLAVKRALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I +G +GI+SRSGTLTYEAV QT+ GLGQ+T Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHMRGKIGIVSRSGTLTYEAVAQTTATGLGQTTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT F+D LELFLAD T++I+M+GEIGG AE + A+ LK + KKP V Sbjct: 176 IGIGGDPINGTNFVDSLELFLADPETQAIIMIGEIGGDAEVQGAELLK---RSKIKKPTV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGAVISGG A+ K+ A+K AGI +A SPA +G ++V+LL Sbjct: 233 GFIAGRTAPPGRRMGHAGAVISGGNDTADFKVEALKSAGIAVADSPASLGSTMVKLLK 290 >gi|71734822|ref|YP_274208.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485469|ref|ZP_05639510.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624397|ref|ZP_06457351.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646689|ref|ZP_06478032.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. aesculi str. 2250] gi|71555375|gb|AAZ34586.1| succinyl-CoA synthetase, alpha subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|320324900|gb|EFW80972.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. glycinea str. B076] gi|320329266|gb|EFW85263.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. glycinea str. race 4] gi|330867449|gb|EGH02158.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330888159|gb|EGH20820.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. mori str. 301020] gi|330987446|gb|EGH85549.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. lachrymans str. M301315] Length = 293 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T +N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVDTTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVILIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|145220333|ref|YP_001131042.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Prosthecochloris vibrioformis DSM 265] gi|145206497|gb|ABP37540.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Chlorobium phaeovibrioides DSM 265] Length = 300 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 169/304 (55%), Positives = 226/304 (74%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T++ VQG+TG GTFHT Q + Y T VV G+ P KG + G + + Sbjct: 1 MSVLVNKDTRLCVQGITGGEGTFHTSQILEY-GTNVVAGVTPGKGGVLYNGNDRDSFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV EA E+ AN +VI+VP + A DAI+E+ +A + +I+CITEGIPV DM++ A Sbjct: 60 VPVFNTVKEAVEKAEANTTVIFVPAAFAADAIMEAADAGLKVIICITEGIPVNDMMKAYA 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 ++ + L+GPNCPG++TP KIGIMPG I +KGS+G++SRSGTLTYEAV Q + GL Sbjct: 120 FVKSKGAVLVGPNCPGVITPGEAKIGIMPGFIHKKGSIGVVSRSGTLTYEAVHQLTHVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDPV GT F+D +++F D+ TE +VM+GEIGGSAEEEAA+++K Sbjct: 180 GQSTCIGIGGDPVIGTRFLDAVKMFAKDDETEGLVMIGEIGGSAEEEAAEYIKKH----F 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG AE+KI AM+ AGI + SPA IG ++++ Sbjct: 236 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAEEKIKAMEAAGIHVVESPADIGEAMMK 295 Query: 296 LLGS 299 LG Sbjct: 296 ALGR 299 >gi|113969978|ref|YP_733771.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Shewanella sp. MR-4] gi|114047213|ref|YP_737763.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Shewanella sp. MR-7] gi|117920160|ref|YP_869352.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Shewanella sp. ANA-3] gi|113884662|gb|ABI38714.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella sp. MR-4] gi|113888655|gb|ABI42706.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella sp. MR-7] gi|117612492|gb|ABK47946.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella sp. ANA-3] Length = 290 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 176/298 (59%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH++QAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSQQAIDY-GTQMVGGVSPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP DAI+E+I+ I LIVCITEGIP LDM+ VK +LE++ Sbjct: 56 TVKDAVAATGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLEVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A DK A++ AG+ S A IG++L G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAADKFAALEAAGVTTVRSLADIGKALRAKTG 289 >gi|146282242|ref|YP_001172395.1| succinyl-CoA synthetase subunit alpha [Pseudomonas stutzeri A1501] gi|145570447|gb|ABP79553.1| succinyl-CoA synthetase alpha chain [Pseudomonas stutzeri A1501] Length = 294 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTMHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A+ASVIYVP D+I+E+ I LIVCITEGIP LDM+ VK + ++ Sbjct: 56 TVREAVEATGADASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLEVKIKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGI PG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIQPGHIHMPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSTFIDILKLFQDDPQTEAIVMIGEIGGSAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG AE+K A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTAEEKFAALQDAGVKTVRSLADIGKALAEVTG 289 >gi|149924785|ref|ZP_01913128.1| succinyl-CoA synthetase alpha subunit [Plesiocystis pacifica SIR-1] gi|149814342|gb|EDM73941.1| succinyl-CoA synthetase alpha subunit [Plesiocystis pacifica SIR-1] Length = 291 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 181/298 (60%), Positives = 226/298 (75%), Gaps = 7/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTK+LVQG+TGK G FH + ++ Y TQVV G+ P KG + VPVF Sbjct: 1 MSVLVDKNTKLLVQGITGKTGAFHAKLSLEY-GTQVVAGVTPGKGGSKALDDR--VPVFD 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+T ANASV++VPP A DAI+ES+ AE+PL++ ITEGIPV DMV VK LE Sbjct: 58 TVAEAVEKTGANASVVFVPPPFAADAIMESVSAEVPLVIAITEGIPVADMVVVKRFLEGK 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPG++TP+ C+IGIMPG I + G +G++SRSGTLTYEAV Q + GLGQ+TA Sbjct: 118 SSRLIGPNCPGVITPNQCRIGIMPGYIHQPGKIGVVSRSGTLTYEAVHQLTALGLGQTTA 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT F+D L+LF D E IVM+GEIGGSAEE A F+K+ KKP V Sbjct: 178 IGIGGDPVNGTNFVDCLQLFNEDPECEGIVMIGEIGGSAEEAGAAFIKEHV----KKPCV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG +APPG+ MGHAGA+ISGGKG AE K+ A+++AG+ IA +P+ IG S+ L+G Sbjct: 234 GFIAGVSAPPGKRMGHAGAIISGGKGTAEAKLEALRDAGVKIADTPSDIGSSMASLMG 291 >gi|163784985|ref|ZP_02179728.1| succinyl-CoA ligase alpha subunit [Hydrogenivirga sp. 128-5-R1-1] gi|159879744|gb|EDP73505.1| succinyl-CoA ligase alpha subunit [Hydrogenivirga sp. 128-5-R1-1] Length = 292 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 165/300 (55%), Positives = 220/300 (73%), Gaps = 11/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KNTKV+VQG+TG+ G+FH Q Y TQVVGG+ P KG G +PVF Sbjct: 1 MSVLVNKNTKVIVQGITGREGSFHATQCKAY-GTQVVGGVTPGKGGQEVEG----IPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA + T A+ S+I+VPP A DAI+E+++A + ++CITEGIPV DM+ VK ++ Sbjct: 56 SVREAVDNTGADCSLIFVPPPFAADAIVEAVDAGVKTVICITEGIPVNDMIPVKNYIKTY 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP+ KIGIMPG IF+KG+VG++SRSGTLTYEA +Q +Q G+GQS Sbjct: 116 YPETVLIGPNCPGVITPEEAKIGIMPGHIFKKGNVGLVSRSGTLTYEAAYQLTQRGIGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV GT F DVL+ F D TE+IVM+GEIGG+AEEEAA+F+K+ KP Sbjct: 176 TAVGIGGDPVPGTVFADVLKWFQDDPETEAIVMIGEIGGTAEEEAAEFIKEYV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V ++AG TAPPG+ MGHAGA+I+GGKG AE+K A++ AG + + IG + ++L Sbjct: 232 VVAYIAGVTAPPGKRMGHAGAIIAGGKGTAEEKYKALEAAGATTVKNISTIGEVVEKVLK 291 >gi|126726905|ref|ZP_01742744.1| succinyl-CoA synthetase subunit alpha [Rhodobacterales bacterium HTCC2150] gi|126703863|gb|EBA02957.1| succinyl-CoA synthetase subunit alpha [Rhodobacterales bacterium HTCC2150] Length = 299 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 225/299 (75%), Positives = 265/299 (88%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGG-NVNVPVF 59 MSIL++K+TK++VQGLTGK GTFHTEQA+ Y TQ+V G HPKKG T WT +P+F Sbjct: 1 MSILINKDTKIIVQGLTGKTGTFHTEQALAYHGTQMVAGTHPKKGGTNWTAESGAELPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAEAKE+T A ASVIYVPP+GA AI E+I+AEI LI CITEG+PV DMVRVK +L+ Sbjct: 61 ASVAEAKEQTGATASVIYVPPAGAAAAIEEAIDAEIDLITCITEGVPVQDMVRVKEKLDA 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPG++TPD CKIGIMPGSIF+KGSVG+LSRSGTLTYEAVFQT+Q GLGQS+ Sbjct: 121 SKSRLIGPNCPGLMTPDECKIGIMPGSIFKKGSVGVLSRSGTLTYEAVFQTTQAGLGQSS 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFID+LEL+LAD T+SI+M+GEIGGSAEE+AAQFL DEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDILELYLADPETQSIIMIGEIGGSAEEDAAQFLIDEAKKGRKKPV 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAPPGRTMGHAGAVISGGKGGA+DKI AM+EAGI ++PSPA++G +LVELLG Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGADDKIAAMQEAGIAVSPSPAKLGETLVELLG 299 >gi|309362784|emb|CAP27541.2| hypothetical protein CBG_07585 [Caenorhabditis briggsae AF16] Length = 322 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 178/297 (59%), Positives = 226/297 (76%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+VQG TGK GTFH +Q I Y +T VVGG++ K T G +PVF Sbjct: 27 NLKINKDTKVIVQGFTGKQGTFHGKQMIDY-KTNVVGGVNANKAGTQHLG----LPVFKN 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 V EA+ +T A+ASVIYVP S A +AI E+++AEIPL+VCITEGIP DMVRVK L+++ Sbjct: 82 VTEARNKTGADASVIYVPASAAANAIEEAMDAEIPLVVCITEGIPQHDMVRVKSRLLKQN 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI++ D CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q G GQ+ Sbjct: 142 KTRLVGPNCPGIISADQCKIGIMPGHIHKRGCIGIVSRSGTLTYEAVHQTTQVGFGQTLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL D T+ I+++GEIGGSAEEEAAQFLKD KKP+V Sbjct: 202 VGIGGDPFNGTNFIDCLHVFLEDPETKGIILIGEIGGSAEEEAAQFLKDHNTGVNKKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKG A DKINA++EAG+ + SPA++G S+ + Sbjct: 262 SFIAGVTAPPGRRMGHAGAIISGGKGTAADKINALREAGVVVTDSPAKLGTSMAKAF 318 >gi|229589341|ref|YP_002871460.1| succinyl-CoA synthetase subunit alpha [Pseudomonas fluorescens SBW25] gi|229361207|emb|CAY48071.1| succinyl-CoA synthetase alpha chain [Pseudomonas fluorescens SBW25] Length = 293 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 169/298 (56%), Positives = 214/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG+TG G+FHT+QAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGITGSQGSFHTQQAIEY-GTKMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP D+I+E+ I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKDAVAATGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVILIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLADIGKALSELTG 289 >gi|254283561|ref|ZP_04958529.1| succinyl-CoA ligase, alpha subunit [gamma proteobacterium NOR51-B] gi|219679764|gb|EED36113.1| succinyl-CoA ligase, alpha subunit [gamma proteobacterium NOR51-B] Length = 290 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 214/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSILINSETKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A ASVIYVP D+I+E+ A + LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVVDAVEATGAQASVIYVPAPFCKDSILEAANAGLELIVCITEGIPTLDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHQPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LELF D ATE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILELFEKDPATEAIVMIGEIGGTAEEEAAAYIKANVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG +L E+ G Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLAEIGSALSEITG 289 >gi|327480490|gb|AEA83800.1| succinyl-CoA synthetase subunit alpha [Pseudomonas stutzeri DSM 4166] Length = 294 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTMHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A+ASVIYVP D+I+E+ I LIVCITEGIP LDM+ VK + ++ Sbjct: 56 TVREAVEATGADASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLEVKIKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGI PG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIQPGHIHMPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPGSTFIDILKLFQDDPQTEAIVMIGEIGGSAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAEVTG 289 >gi|307545698|ref|YP_003898177.1| succinyl-CoA synthetase subunit alpha [Halomonas elongata DSM 2581] gi|307217722|emb|CBV42992.1| succinyl-CoA synthetase, subunit alpha [Halomonas elongata DSM 2581] Length = 290 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 177/298 (59%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E T A ASVIYVP D+I+E+ A I LIVCITEGIP LDM+ VK + ++ Sbjct: 56 TVAEAVEATGAEASVIYVPAPFCKDSILEAANAGIKLIVCITEGIPTLDMLDVKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TPD CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQS+ Sbjct: 116 GARLIGPNCPGVITPDECKIGIMPGHIHKAGKVGIVSRSGTLTYEAVKQTTDHGFGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L F D ATE+IVM+GEIGG+AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILAEFEKDPATEAIVMIGEIGGTAEEEAAAYIKENVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L E G Sbjct: 232 AYIAGVTAPPGKRMGHAGAIIAGGKGTADEKFGALEAAGVKTVRSLAEIGDALKEAAG 289 >gi|254514205|ref|ZP_05126266.1| succinyl-CoA ligase, alpha subunit [gamma proteobacterium NOR5-3] gi|219676448|gb|EED32813.1| succinyl-CoA ligase, alpha subunit [gamma proteobacterium NOR5-3] Length = 290 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSILINKDTKVICQGFTGSQGTFHSEQAIEY-GTKMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E T A+ASVIYVP D+I+E+ + L+VCITEGIP LDM+ K + ++ Sbjct: 56 TVAEAVEATGADASVIYVPAPFCKDSILEAANGGVKLVVCITEGIPTLDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QTS G GQST Sbjct: 116 GVRLVGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTSDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L +F AD ATE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILAMFEADPATEAIVMIGEIGGTAEEEAAAYIKANVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG L E+ G Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLADIGAGLKEITG 289 >gi|188996559|ref|YP_001930810.1| succinyl-CoA synthetase, alpha subunit [Sulfurihydrogenibium sp. YO3AOP1] gi|188931626|gb|ACD66256.1| succinyl-CoA synthetase, alpha subunit [Sulfurihydrogenibium sp. YO3AOP1] Length = 293 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 167/300 (55%), Positives = 218/300 (72%), Gaps = 11/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KNTKV+VQG+TG+ G+FH Q Y TQVVGG+ P K G +PVF Sbjct: 1 MSVLVNKNTKVIVQGITGREGSFHATQCKAY-GTQVVGGVTPGKKGENVEG----IPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + A+ S+I+VPP A DAI+E+++A I ++CITEGIPV DM+ VK ++K Sbjct: 56 TVNEAVKEAGADCSLIFVPPPFAADAILEAVDAGIKTVICITEGIPVNDMLPVKQYIKKY 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP KIGIMPG IF+KG+VGI+SRSGTLTYEA +Q + G+GQS Sbjct: 116 YPDTVLIGPNCPGVITPGEAKIGIMPGHIFKKGNVGIVSRSGTLTYEAAYQLTTRGIGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDP+ GT F DVL+ F D TE+IVM+GEIGG+AEEEAA+F+K KKP Sbjct: 176 TAVGIGGDPIPGTVFADVLKWFQDDPETEAIVMIGEIGGTAEEEAAEFIKSYV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V ++AG TAPPG+ MGHAGA+ISGGKG A +K A++ AG +P+ IG ++ ++L Sbjct: 232 VVAYIAGVTAPPGKRMGHAGAIISGGKGTAAEKYKALESAGAITVKNPSIIGETVEKILK 291 >gi|330967006|gb|EGH67266.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. actinidiae str. M302091] Length = 293 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 170/298 (57%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T +N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVDTTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVIVIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|330811083|ref|YP_004355545.1| succinate--CoA ligase (GDP-forming) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379191|gb|AEA70541.1| Succinate--CoA ligase (GDP-forming) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 294 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 169/298 (56%), Positives = 215/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG+TG G+FHT+QAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGITGSQGSFHTQQAIEY-GTKMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKDAVAATGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GITLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|319406381|emb|CBI80022.1| succinyl-CoA synthetase, alpha chain [Bartonella sp. AR 15-3] Length = 300 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 235/299 (78%), Positives = 269/299 (89%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSIL++K+TKVLVQGLTGK GTFHTEQA+ Y TQ+VGGI+PKKG W G +P+F Sbjct: 1 MSILINKDTKVLVQGLTGKTGTFHTEQALAYHGTQMVGGINPKKGGETWKGLKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V E KE+T A+ASVIYVPP GA DAIIE+IEAEI LIVCITEGIPV+DMV+VKA+LE+ Sbjct: 61 ASVMEGKEKTGADASVIYVPPGGAADAIIEAIEAEIGLIVCITEGIPVMDMVKVKAKLEQ 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGILTPD CKIGIMPGSIFRKGSVG++SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLIGPNCPGILTPDECKIGIMPGSIFRKGSVGVVSRSGTLTYEAVFQTSHEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEFIDVLE+FLADE T+SIVM+GEIGGSAEEEAAQFLKDEAK+GRKKPI Sbjct: 181 AIGIGGDPVKGTEFIDVLEMFLADEETQSIVMIGEIGGSAEEEAAQFLKDEAKKGRKKPI 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ A I ++PSP++IG++LV +L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMEAAEIRVSPSPSQIGKTLVAVLK 299 >gi|77164233|ref|YP_342758.1| succinyl-CoA ligase, alpha subunit [Nitrosococcus oceani ATCC 19707] gi|76882547|gb|ABA57228.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nitrosococcus oceani ATCC 19707] Length = 291 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 178/299 (59%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDK T+V+ QG TGK GTFH+ QA+ Y TQ+VGG+ P KG G PVF Sbjct: 1 MSILVDKQTRVICQGFTGKQGTFHSRQALEY-GTQLVGGVTPGKGGQTHLGQ----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E T ANA++IYVP + A DAI+E+ + +PLIVCITEGIPVLDM+RVKA L Sbjct: 56 TVAEAVEATGANATMIYVPAAFAADAILEAADGGVPLIVCITEGIPVLDMLRVKAALAGL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S L+GPNCPGI+TP +CKIGIMPG I + G +GI+SRSGTLTYEAV+QTS++GLGQST Sbjct: 116 PSYLVGPNCPGIITPGACKIGIMPGDIHQAGRIGIVSRSGTLTYEAVYQTSRKGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP++G F+D L LF D TE +++VGEIGGSAEEEAA++++ KP+V Sbjct: 176 VGIGGDPIQGMSFVDCLTLFEQDPQTEGVILVGEIGGSAEEEAAEYIQHHVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+ISGGKG AE K+ A+ AG+ IA SPA +G + + +G Sbjct: 232 AYIAGLTAPKGKRMGHAGAIISGGKGTAEGKLKALSAAGVSIAHSPAEMGECMEQAMGD 290 >gi|329295939|ref|ZP_08253275.1| Succinyl-CoA synthetase, alpha subunit [Plautia stali symbiont] Length = 291 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 171/299 (57%), Positives = 219/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI++DKNTKV+ QG TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSIMIDKNTKVICQGFTGGQGTFHSEQALAY-GTQLVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A A+VIYVP D I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATATVIYVPAPFCKDGILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP C IGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECMIGIMPGHIHQPGRVGIVSRSGTLTYEAVKQTTDIGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L++F D TE+IVM+GEIGGSAEEEAA F+K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKMFQDDPQTEAIVMIGEIGGSAEEEAAAFIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L + Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGDAVKAVLPA 290 >gi|148652082|ref|YP_001279175.1| succinyl-CoA synthetase subunit alpha [Psychrobacter sp. PRwf-1] gi|148571166|gb|ABQ93225.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Psychrobacter sp. PRwf-1] Length = 291 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 167/299 (55%), Positives = 221/299 (73%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DK+TKVLVQG TGK GTFH+EQAI Y T+VVGG+ P KG G +PVF Sbjct: 1 MSVLIDKDTKVLVQGFTGKNGTFHSEQAIEY-GTKVVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA E T A+ASVIYVP D+IIE+++A + LIV ITEG+P LDM++ K +E++ Sbjct: 56 TMAEAMEATQADASVIYVPAPFVLDSIIEAVDAGVKLIVVITEGVPTLDMLKAKRYIEEA 115 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +++GPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT++ G GQST Sbjct: 116 GDVKMVGPNCPGVITPGQCKIGIMPGHIHLPGKVGIISRSGTLTYEAVAQTTKLGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G ID L++F D TE+IV++GEIGG+AEEEAA ++K+ KP+ Sbjct: 176 CIGIGGDPIPGMNQIDCLKMFQEDPQTEAIVLIGEIGGTAEEEAAAYIKEHV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +G++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI P++IG ++ ++ G Sbjct: 232 IGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFKAFEDAGIAYTRDPSKIGETVKQVTG 290 >gi|294506661|ref|YP_003570719.1| succinyl-CoA synthetase, alpha subunit [Salinibacter ruber M8] gi|294342989|emb|CBH23767.1| succinyl-CoA synthetase, alpha subunit [Salinibacter ruber M8] Length = 288 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 165/297 (55%), Positives = 210/297 (70%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD +T+V+VQG TG GTFH EQ + Y T VV G+ P KG G PV+ Sbjct: 1 MSILVDDDTRVVVQGFTGSEGTFHAEQMMDY-GTNVVAGVTPGKGGQTHLGR----PVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+ AN S+I+VPP A DAI ES +A +I+CITEGIPV DM ++K Sbjct: 56 TVAEAVEQENANTSIIFVPPPFAADAIQESADAGAEVIICITEGIPVADMKPTYQYVKKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG++TP + K+GIMP IF GS+GI+SRSGTLTYEAV Q ++ G GQSTA Sbjct: 116 GAHLIGPNCPGVITPGAAKVGIMPAMIFEPGSIGIISRSGTLTYEAVDQITRAGFGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID LELF D T+ IV++GEIGG+ E+EAA++++D P+ Sbjct: 176 VGIGGDPVIGTRFIDALELFEDDPDTDGIVLIGEIGGTDEQEAARYVQDHM----DTPVF 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGG G AE K A++EAG + +PA IG ++ ++L Sbjct: 232 GFIAGRTAPPGRRMGHAGAIVSGGSGTAEAKFQALEEAGATVVKNPALIGETVQDVL 288 >gi|24373497|ref|NP_717540.1| succinyl-CoA synthase, alpha subunit [Shewanella oneidensis MR-1] gi|24347797|gb|AAN54984.1|AE015636_8 succinyl-CoA synthase, alpha subunit [Shewanella oneidensis MR-1] Length = 290 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 175/298 (58%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH++QAI Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSQQAIDY-GTQMVGGVSPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP DAI+E+I+ I LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVAATGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I KG VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A DK A++ AG+ S A IG++L G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAADKFAALEAAGVTTVRSLADIGKALRAKTG 289 >gi|319892263|ref|YP_004149138.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Staphylococcus pseudintermedius HKU10-03] gi|317161959|gb|ADV05502.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Staphylococcus pseudintermedius HKU10-03] gi|323464640|gb|ADX76793.1| succinate-CoA ligase alpha subunit [Staphylococcus pseudintermedius ED99] Length = 301 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 174/296 (58%), Positives = 220/296 (74%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ VDKN+KV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPVF Sbjct: 1 MSVFVDKNSKVIVQGITGSTALFHTKQMLEY-GTQIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK+ T N SVIYVP A DAI+E I+AE+ L +CITE IPV+DM++VK LE Sbjct: 56 TVEEAKKETGGNVSVIYVPAPFAADAILECIDAELDLAICITEHIPVIDMIKVKRYLEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++T D KIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQSTA Sbjct: 116 KTRLIGPNCPGVITSDETKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLE F D+ T+++VM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLEAFNNDDDTKAVVMIGEIGGTAEEEAAEWIKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI + E G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKTLNECGVKTAATPSEIGSTLIEA 287 >gi|23014367|ref|ZP_00054187.1| COG0074: Succinyl-CoA synthetase, alpha subunit [Magnetospirillum magnetotacticum MS-1] Length = 291 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 184/298 (61%), Positives = 228/298 (76%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+ NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T +++PVF Sbjct: 1 MAVLVNANTKVICQGFTGAQGTFHSEQAIAY-GTKMVGGVTPGKGGTTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK +T NASVIYVPP A DAI+E+I+AEI L VCITEGIPV DM+ VK L+ S Sbjct: 56 TVAEAKAKTGCNASVIYVPPPFAADAILEAIDAEIELAVCITEGIPVADMLAVKRALQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I +G VGI+SRSGTLTYEAV QT+ GLGQ+T Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHLRGKVGIVSRSGTLTYEAVAQTTATGLGQTTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT F+D LELFLAD T++I+M+GEIGG AE + A+ LK + KKP V Sbjct: 176 IGIGGDPINGTNFVDSLELFLADPETQAIIMIGEIGGDAEVQGAELLK---RSKIKKPTV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGAVISGG A+ K+ A+K AGI +A SPA +G ++V+LL Sbjct: 233 GFIAGRTAPPGRRMGHAGAVISGGNDTADFKVEALKSAGIAVADSPASLGSTMVKLLK 290 >gi|312959848|ref|ZP_07774364.1| succinyl-CoA synthetase alpha [Pseudomonas fluorescens WH6] gi|311286014|gb|EFQ64579.1| succinyl-CoA synthetase alpha [Pseudomonas fluorescens WH6] Length = 293 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 169/298 (56%), Positives = 214/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG+TG G+FHT+QAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTKVICQGITGSQGSFHTQQAIEY-GTKMVGGVTPGKGGTEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVP D+I+E+ I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVKDAVAATGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVVLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 289 >gi|254498638|ref|ZP_05111356.1| succinyl CoA synthetase alpha chain [Legionella drancourtii LLAP12] gi|254352086|gb|EET10903.1| succinyl CoA synthetase alpha chain [Legionella drancourtii LLAP12] Length = 291 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 176/299 (58%), Positives = 218/299 (72%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K TKVL QG TGK GT+H+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLVNKQTKVLCQGFTGKQGTYHSEQAIAY-GTRMVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A ASVIYVP D+IIE+ +A I LIVCITEG+PVLDM+ VK LE + Sbjct: 56 TMREAVDATKAEASVIYVPAPFCKDSIIEAADAGIQLIVCITEGVPVLDMLEVKVYLENN 115 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RLIGPNCPGI+TP CKIGIMPGSI G VGI+SRSGTLTYEAV QT+ +G GQST Sbjct: 116 TQARLIGPNCPGIITPGECKIGIMPGSIHLPGKVGIVSRSGTLTYEAVKQTTDKGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT FID L LF D T++I+MVGEIGGSAEEEAA+++K KP+ Sbjct: 176 CIGIGGDPIPGTNFIDALALFEQDPQTQAIIMVGEIGGSAEEEAAEYIKSHIS----KPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG TAP G+ MGHAGA+ISGGKG A +K A++ AG+ SPA +G ++ E+ G Sbjct: 232 VSYIAGVTAPAGKRMGHAGAIISGGKGTAAEKYAALEAAGVRTVRSPADLGDAIAEVTG 290 >gi|261856575|ref|YP_003263858.1| succinyl-CoA synthetase, subunit alpha [Halothiobacillus neapolitanus c2] gi|261837044|gb|ACX96811.1| succinyl-CoA synthetase, alpha subunit [Halothiobacillus neapolitanus c2] Length = 295 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 177/301 (58%), Positives = 221/301 (73%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K T+V+ QG TGK GTFH+EQAI Y T VGG+ P KG +++ PVF Sbjct: 1 MSILINKQTRVICQGFTGKQGTFHSEQAIAY-GTNFVGGVTPGKGGQ----SHLDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TV +A ++TAA AS+IYVP A DAI+E+ +A I +I CITEGIPVLDM+ VKA L + Sbjct: 56 TVHDAVQQTAATASMIYVPAPFAADAILEAADAGIEVIACITEGIPVLDMLNVKAVLASD 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RLIGPNCPG++TP CKIGIMPGSI G +GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 116 YPDVRLIGPNCPGLITPGECKIGIMPGSIHLPGRIGIVSRSGTLTYEAVAQTTAAGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ G +FID L LF D TE+++MVGEIGG+AEEEAA F+K++ KP Sbjct: 176 TCVGIGGDPIHGMDFIDCLALFADDPQTEAVIMVGEIGGNAEEEAAHFIKEQ----FNKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V ++AG TAP G+ MGHAGAVI+GG+G AEDK A+K AG+ I P +GR++ LLG Sbjct: 232 VVAYIAGATAPTGKRMGHAGAVIAGGRGSAEDKFRALKAAGVHIVRDPTTMGRTMANLLG 291 Query: 299 S 299 S Sbjct: 292 S 292 >gi|322787000|gb|EFZ13224.1| hypothetical protein SINV_06825 [Solenopsis invicta] Length = 322 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 179/300 (59%), Positives = 230/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +D NTKV+ QG TGK GTFH +QA+ Y T++VGG+ PKK T G PV+ + Sbjct: 24 NLKIDANTKVICQGFTGKQGTFHCQQALDY-GTKIVGGVSPKKAGTEHLGK----PVYKS 78 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE T A A+VIYVPP A AI+E+I+AE+PLIVCITEGIP DMV+VK RL E++ Sbjct: 79 VKEAKEATGATATVIYVPPPAAASAIMEAIDAEMPLIVCITEGIPQHDMVKVKRRLLEQN 138 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 139 KSRLIGPNCPGIIAPEQCKIGIMPGHIHQRGKIGIVSRSGTLTYEAVNQTTLAGLGQTLC 198 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID L++FL D I+M+GEIGGSAEE AA++L ++ G+ KP+V Sbjct: 199 VGIGGDPFNGTDFIDCLDVFLTDPDCGGIIMIGEIGGSAEEFAAEYLIEKNTGGKAKPVV 258 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPGR MGHAGA+ISGGKGGA+DKINA+++AG+ + SPA++G L++ + L Sbjct: 259 SFIAGLTAPPGRRMGHAGAIISGGKGGAQDKINALEKAGVIVTRSPAQMGNELLKEMTRL 318 >gi|114328733|ref|YP_745890.1| succinyl-CoA synthetase alpha chain [Granulibacter bethesdensis CGDNIH1] gi|114316907|gb|ABI62967.1| succinyl-CoA synthetase alpha chain [Granulibacter bethesdensis CGDNIH1] Length = 291 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 188/299 (62%), Positives = 236/299 (78%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ +T++LVQGLTG GTFHTEQAI Y TQVVGG+ P KG + +++PVF Sbjct: 1 MSILIGSHTRLLVQGLTGAQGTFHTEQAIAY-GTQVVGGVTPGKGGSRH----LDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA+ERT A+ASVIYVPP A DAI+E+I+A +PL+VCITEGIPVLDMVRV+ LE + Sbjct: 56 TVMEARERTGADASVIYVPPPHAADAILEAIDAGMPLVVCITEGIPVLDMVRVRRALEGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP +CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 HTRLIGPNCPGVITPGACKIGIMPGHIHKRGRIGIVSRSGTLTYEAVAQTTAAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGT+FI+VLE+FL D TE+IVM+GEIGG +E AA++L G KP+V Sbjct: 176 VGIGGDPVKGTDFIEVLEMFLKDPETEAIVMIGEIGGQSEIHAAEYL---IASGADKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG +APPGR MGHAGAVISGG+ AE K NA++ AG+ IA SP+ +G ++++ L Sbjct: 233 GFIAGSSAPPGRRMGHAGAVISGGRDTAEAKYNALRAAGVHIAQSPSTLGETMLKALKR 291 >gi|256080484|ref|XP_002576511.1| succinyl-CoA synthetase-related [Schistosoma mansoni] gi|238661780|emb|CAZ32748.1| succinyl-CoA synthetase-related [Schistosoma mansoni] Length = 347 Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats. Identities = 180/300 (60%), Positives = 232/300 (77%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +IL+D TK++ QG TGK GTFH++Q + Y T++VGG+ P KG + G +PVF + Sbjct: 50 NILLDDKTKLICQGFTGKQGTFHSQQTLAY-GTKLVGGVSPGKGGSSHLG----LPVFNS 104 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE T A A+VIYVPP A AI E+I+A+IPLIVCITEGIP DM+RV+ RL E+S Sbjct: 105 VNEAKEATGATATVIYVPPPHAAAAIHEAIDAQIPLIVCITEGIPQHDMIRVRKRLSEQS 164 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPGI+ PD CKIGIMP I + G+VGI+SRSGTLTYEAVFQT+Q GLGQS Sbjct: 165 ASRLIGPNCPGIIKPDVCKIGIMPAHIHKPGTVGIVSRSGTLTYEAVFQTTQVGLGQSLC 224 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F D LE+FL D T+SI+++GEIGG +EE+AA+FLK+ +KP+V Sbjct: 225 VGIGGDPFNGTNFTDCLEVFLEDPNTKSIILLGEIGGDSEEQAAEFLKEHNTGPNRKPVV 284 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPGR MGHAGA+IS GKGGA++K+ A++ AG+ + PSPA+IG++L++ + L Sbjct: 285 SFIAGVTAPPGRRMGHAGAIISLGKGGAKEKMAALESAGVVVTPSPAQIGKTLLQAIADL 344 >gi|83592548|ref|YP_426300.1| succinyl-CoA synthetase subunit alpha [Rhodospirillum rubrum ATCC 11170] gi|83575462|gb|ABC22013.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodospirillum rubrum ATCC 11170] Length = 292 Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats. Identities = 186/299 (62%), Positives = 230/299 (76%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV +TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG + +++PVF Sbjct: 1 MSVLVSNDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGSTH----LDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A+E T NA+VIYVPP A DAI+E+I AEI L VCITEGIPVLDMV+VK L S Sbjct: 56 TVIQAREATGCNATVIYVPPPFAADAILEAINAEIELAVCITEGIPVLDMVKVKRALRGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I +G +G++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHTRGKIGVVSRSGTLTYEAVAQTTAAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT FID LE+FLAD T+ I+M+GEIGGSAEEEAA+FLK KKP+ Sbjct: 176 IGIGGDPVNGTNFIDCLEMFLADPETQGIIMIGEIGGSAEEEAAEFLKHSKI---KKPMC 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPG+ MGHAGA+ISGGKG A DK++AM+ AGI +A SP+ +G ++VE + S Sbjct: 233 GFIAGVTAPPGKRMGHAGAIISGGKGTAGDKMDAMRSAGILVADSPSALGSTMVEAMKS 291 >gi|167465541|ref|ZP_02330630.1| succinyl-CoA synthetase subunit alpha [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382313|ref|ZP_08056220.1| succinyl-CoA synthetase subunit alpha-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153666|gb|EFX46041.1| succinyl-CoA synthetase subunit alpha-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 311 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 172/304 (56%), Positives = 225/304 (74%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSIL+ +TKV+ Q +TGK G FHT+ + Y TQ+V G+ P KG T G Sbjct: 1 MSILIHNDTKVMTQNMTGKTGMFHTKGGLDY-GTQMVCGVTPGKGGTKVNFTLEDGNVKT 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PV+ TV EAKE T A SVIYVPP+ A D+I+E+++A++ L++CITEGIPVLDM++VK Sbjct: 60 LPVYNTVQEAKEATGATVSVIYVPPAFAADSIMEAVDADLDLVICITEGIPVLDMIKVKR 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +E +RLIGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAV Q + G+ Sbjct: 120 FMEGKKTRLIGPNCPGVITPGECKIGIMPGYIHAPGHVGVVSRSGTLTYEAVHQLTTRGI 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQSTAVGIGGDPVKG+EFID+L LF D T +++M+GEIGG+AEEEAA+++K Sbjct: 180 GQSTAVGIGGDPVKGSEFIDILTLFNEDPDTYAVIMIGEIGGTAEEEAAEWIKANM---- 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+ G+TAPPG+ MGHAGA+ISGGKG A +KI M+ GI +AP+P+ +G +LV Sbjct: 236 KKPVVGFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIATMEACGIRVAPTPSEMGSTLVR 295 Query: 296 LLGS 299 +L Sbjct: 296 VLEE 299 >gi|157835442|pdb|2NUA|A Chain A, C123av Mutant Of E. Coli Succinyl-Coa Synthetase gi|157835444|pdb|2NUA|D Chain D, C123av Mutant Of E. Coli Succinyl-Coa Synthetase Length = 288 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 171/297 (57%), Positives = 216/297 (72%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 SIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF T Sbjct: 1 SILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFNT 55 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 VREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPN PG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST V Sbjct: 116 VRMIGPNVPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+VG Sbjct: 176 GIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 YIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 288 >gi|224125650|ref|XP_002329684.1| predicted protein [Populus trichocarpa] gi|222870592|gb|EEF07723.1| predicted protein [Populus trichocarpa] Length = 330 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 182/297 (61%), Positives = 228/297 (76%), Gaps = 9/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF TV Sbjct: 36 VFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNTV 90 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 AEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMVRVKA L ++ Sbjct: 91 AEAKAETKANASVIYVPPPFAAAAILEAMEAELNLVVCITEGIPQHDMVRVKAALNRQTK 150 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMP I + G +GI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 151 TRLIGPNCPGIIKPGECKIGIMPAYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCV 210 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D +E FL D TE I+++GEIGG+AEE+AA +K+ G +KP+V Sbjct: 211 GIGGDPFNGTNFVDCIEKFLVDPQTEGIILIGEIGGTAEEDAAALIKE---SGTEKPVVA 267 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA++SGGKG A+DKI ++EAG+ + SPA+IG +++++ Sbjct: 268 FIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVAMLDVFK 324 >gi|167626464|ref|YP_001676964.1| succinyl-CoA synthetase subunit alpha [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596465|gb|ABZ86463.1| succinyl-CoA synthetase, alpha subunit [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 290 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 167/298 (56%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKVLVQG TGK GTFH+EQAI Y T +VGG+ P KG T ++ PVF Sbjct: 1 MSVLVDKNTKVLVQGFTGKNGTFHSEQAIAY-GTNIVGGVTPGKGGTTH----LDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA T A+ASVIYVP D+ IE+I++ + L+V ITEG+P LDM+ VK L+ Sbjct: 56 TMAEAVAATGADASVIYVPAPFVKDSAIEAIDSGVKLVVIITEGVPTLDMLVVKEYLKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +++GPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT++ G GQST Sbjct: 116 DVQVVGPNCPGVITPGQCKIGIMPGHIHQPGKVGIISRSGTLTYEAVAQTTKLGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G I+ L+L D TE+I+++GEIGG+AEEEAA+++K KP++ Sbjct: 176 IGIGGDPIPGMNQIEALKLLENDPQTEAIILIGEIGGTAEEEAAEYIKHNV----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAPPG+ MGHAGA+ISGGKG A++K A + AGI SPA +G L E+ G Sbjct: 232 GYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAAFEAAGIAYTRSPAELGSKLKEVTG 289 >gi|42525135|ref|NP_970515.1| succinyl-CoA synthetase alpha chain [Bdellovibrio bacteriovorus HD100] gi|39577346|emb|CAE81169.1| succinyl-CoA synthetase alpha chain [Bdellovibrio bacteriovorus HD100] Length = 290 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 170/299 (56%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++KNTKV+ QG TG GTFH+EQA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MAILINKNTKVICQGFTGAQGTFHSEQALAY-GTKMVGGVTPGKGGTTHIG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T NASVI+VPP A D+I+E+++A++ L++CITEGIPVLDMV+VK ++ Sbjct: 56 TVKEAKAATGCNASVIFVPPPFAADSIMEAVDADLDLVICITEGIPVLDMVKVKEYMKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CKIGIMPG I + G +G+LSRSGTLTYEAV Q + G+GQST Sbjct: 116 RTRLVGPNCPGVITPGECKIGIMPGHIHKPGRIGVLSRSGTLTYEAVGQLTALGIGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+LF D T+ ++M+GEIGG+AEEEAA+++K KKP+ Sbjct: 176 VGIGGDPVNGTNFIDVLKLFNEDPDTDGVIMIGEIGGTAEEEAAEYIKAH----FKKPVT 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG AP G+ MGHAGA+ISGGKG AE K A++ AG I+ SPA +G ++ +L Sbjct: 232 AFIAGAAAPAGKRMGHAGAIISGGKGTAEAKFKALEAAGCKISRSPADMGTTMQSMLKK 290 >gi|241668897|ref|ZP_04756475.1| succinyl-CoA synthetase, alpha subunit [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877429|ref|ZP_05250139.1| succinyl-CoA synthetase subunit alpha [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843450|gb|EET21864.1| succinyl-CoA synthetase subunit alpha [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 290 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 169/298 (56%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKVLVQG TGK GTFH+EQAI Y T +VGG+ P KG T +N PVF Sbjct: 1 MSVLVDKNTKVLVQGFTGKNGTFHSEQAIAY-GTNIVGGVTPGKGGTTH----LNRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA T A+ASVIYVP D+ IE+I++ + L+V ITEG+P LDM+ VK L+ Sbjct: 56 TMAEAVAATGADASVIYVPAPFVKDSAIEAIDSGVKLVVIITEGVPTLDMLVVKEYLKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +++GPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT++ G GQST Sbjct: 116 DVQVVGPNCPGVITPGQCKIGIMPGHIHQPGKVGIISRSGTLTYEAVAQTTKLGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G I+ L+L D TE+I+++GEIGG+AEEEAA+++K KP++ Sbjct: 176 IGIGGDPIPGMNQIEALKLLENDPQTEAIILIGEIGGTAEEEAAEYIKHNV----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAPPG+ MGHAGA+ISGGKG AE+K A + AGI SPA +G L E+ G Sbjct: 232 GYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAAFEAAGIAYTRSPAELGSKLKEVTG 289 >gi|314933427|ref|ZP_07840792.1| succinyl-CoA synthase, alpha subunit [Staphylococcus caprae C87] gi|313653577|gb|EFS17334.1| succinyl-CoA synthase, alpha subunit [Staphylococcus caprae C87] Length = 302 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 167/296 (56%), Positives = 221/296 (74%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T AN SV+YVP A D+I+E+ EAE+ +++CITE IPV+DMV+V L+ Sbjct: 56 TVEEAKNETGANVSVVYVPAPFAADSILEAAEAELDMVICITEHIPVVDMVKVNRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T+++VM+GEIGG+AEEEAAQ++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKEFNEDPETKAVVMIGEIGGTAEEEAAQWIKQNM----NKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+ G+TAPPG+ MGHAGA+ISGGKG A++KI + + G+ A +P+ IG +L++ Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTADEKIKTLNDCGVETADTPSEIGTTLIDA 287 >gi|330685666|gb|EGG97307.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus epidermidis VCU121] Length = 301 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 168/296 (56%), Positives = 221/296 (74%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK+ T AN SV+YVP A D+I+E+ +AE+ +++CITE IPV+DMV+VK L+ Sbjct: 56 TVEEAKQETGANVSVVYVPAPFAADSILEAADAELDMVICITEHIPVVDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T+++VM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDPETKAVVMIGEIGGTAEEEAAEWIKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTASEKIKTLNSCGVETADTPSEIGTTLIEA 287 >gi|254480392|ref|ZP_05093639.1| succinate-CoA ligase, alpha subunit subfamily [marine gamma proteobacterium HTCC2148] gi|214038975|gb|EEB79635.1| succinate-CoA ligase, alpha subunit subfamily [marine gamma proteobacterium HTCC2148] Length = 290 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 170/298 (57%), Positives = 214/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLIDKNTKVICQGFTGSQGTFHSEQAIEY-GTKMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A+ASVIYVP D+I+E+ + LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVVEAVAATGADASVIYVPAPFCKDSILEAANGGVKLIVCITEGIPTLDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLVGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D ATE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFQNDPATEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG +L E+ G Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLAEIGTALGEITG 289 >gi|83816633|ref|YP_444808.1| succinyl-CoA synthetase, alpha subunit [Salinibacter ruber DSM 13855] gi|83758027|gb|ABC46140.1| succinyl-CoA synthetase, alpha subunit [Salinibacter ruber DSM 13855] Length = 288 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 166/297 (55%), Positives = 211/297 (71%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD +T+V+VQGLTG GTFH EQ + Y T VV G+ P KG G PV+ Sbjct: 1 MSILVDDDTRVVVQGLTGSEGTFHAEQMMDY-GTNVVAGVTPGKGGQTHLGR----PVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+ AN S+I+VPP A DAI ES +A +I+CITEGIPV DM ++K Sbjct: 56 TVAEAVEQENANTSIIFVPPPFAADAIQESADAGAEVIICITEGIPVADMKPTYQYVKKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG++TP + K+GIMP IF GS+GI+SRSGTLTYEAV Q ++ G GQSTA Sbjct: 116 GAHLIGPNCPGVITPGAAKVGIMPAMIFEPGSIGIISRSGTLTYEAVDQITRAGFGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID LELF D T+ IV++GEIGG+ E+EAA++++D P+ Sbjct: 176 VGIGGDPVIGTRFIDALELFEDDPDTDGIVLIGEIGGTDEQEAARYVQDHM----DTPVF 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA++SGG G AE K A++EAG + +PA IG ++ ++L Sbjct: 232 GFIAGRTAPPGRRMGHAGAIVSGGSGTAEAKFQALEEAGATVVKNPALIGETVQDVL 288 >gi|53804667|ref|YP_113447.1| succinyl-CoA synthase subunit alpha [Methylococcus capsulatus str. Bath] gi|53758428|gb|AAU92719.1| succinyl-CoA synthase, alpha subunit [Methylococcus capsulatus str. Bath] Length = 290 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 176/299 (58%), Positives = 225/299 (75%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ K+T+V+ QG TGK TFH+ Q + Y TQ+VGG+ P KG + +++PVF Sbjct: 1 MSILIGKDTRVICQGFTGKQATFHSRQCLDY-GTQLVGGVTPGKGGSRH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T ANAS+IYVPP A DAI+E+ +A I +IVCITEGIPVL M++VKA L Sbjct: 56 TVREAVAATGANASMIYVPPPFAADAILEAADAGISVIVCITEGIPVLHMLKVKAALASY 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPGI+TPD CKIGIMPG I RKGS+GI+SRSGTLTYEAV+QT++ GLGQST Sbjct: 116 DAVLIGPNCPGIITPDECKIGIMPGFIHRKGSIGIVSRSGTLTYEAVYQTTRVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KG +FIDVL +F D T I+MVGEIGGSAEE+AA+F++ KP+V Sbjct: 176 VGIGGDPIKGLDFIDVLGMFEEDPDTAGIIMVGEIGGSAEEDAAEFIQAHVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAPPG+ MGHAGA+I+GGKG K+ AM+ AG+ + S + +GR ++ELL + Sbjct: 232 GYIAGLTAPPGKRMGHAGAIITGGKGTGAGKVEAMRRAGVEMVDSLSDMGRRMLELLKN 290 >gi|254369721|ref|ZP_04985731.1| hypothetical protein FTAG_01047 [Francisella tularensis subsp. holarctica FSC022] gi|157122680|gb|EDO66809.1| hypothetical protein FTAG_01047 [Francisella tularensis subsp. holarctica FSC022] Length = 290 Score = 318 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKVLVQG TGK GTFH+EQAI Y T +VGG+ P KG T ++ PVF Sbjct: 1 MSVLVDKNTKVLVQGFTGKNGTFHSEQAIAY-GTNIVGGVTPGKGGTTH----LDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA T A+ASVIYVP D+ IE+I++ + L+V ITEG+P LDM+ VK L+ Sbjct: 56 TMAEAVAATDADASVIYVPAPFVKDSAIEAIDSGVKLVVIITEGVPTLDMLVVKEYLKDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPGI+TP CKIGIMPG I KG VGI+SRSGTLTYEAV QT++ GQST Sbjct: 116 DVRVIGPNCPGIITPGECKIGIMPGHIHMKGKVGIISRSGTLTYEAVAQTTKLSFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G I+ L+L D TE+I+++GEIGG+AEEEAA+++K KP++ Sbjct: 176 IGIGGDPIPGMNQIEALKLLENDPQTEAIILIGEIGGTAEEEAAEYIKHNV----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAPPG+ MGHAGA+ISGGKG AE+K A + AGI SPA IG+ L E+ G Sbjct: 232 GYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAAFEAAGIAYTRSPAEIGKKLKEVTG 289 >gi|197119590|ref|YP_002140017.1| succinyl-CoA synthetase subunit alpha [Geobacter bemidjiensis Bem] gi|197088950|gb|ACH40221.1| succinyl-CoA synthetase, alpha subunit [Geobacter bemidjiensis Bem] Length = 290 Score = 318 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 167/298 (56%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI+++K T+V+ QG+TG G FH + A Y TQ+VGG+ P KG T G PVF Sbjct: 1 MSIMINKETRVITQGITGATGLFHAQGAREY-GTQMVGGVTPGKGGTVIDG----FPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A ASVIYVPP A D+I+E+++A + L+ CITEGIPVLDMV+VK L Sbjct: 56 TVAEAVHETGATASVIYVPPPFAADSIMEAVDAGVELVCCITEGIPVLDMVKVKQYLVGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CKIGIMPG I + G +G++SRSGTLTYEAV+Q + GLGQST Sbjct: 116 RTRLVGPNCPGVITPGQCKIGIMPGYIHKPGRIGVVSRSGTLTYEAVWQLTSIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L LF AD T++++M+GEIGG+AEEEAA+F+K+ KKP+ Sbjct: 176 VGIGGDPVNGTSHIDCLRLFEADPDTDAVIMIGEIGGNAEEEAARFVKENM----KKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A +K+ ++E GI +A SPA + ++L+++ Sbjct: 232 AYIAGVTAPPGKRMGHAGAIISGGKGTATEKVAVLRECGISVADSPAEMAQALLQVYK 289 >gi|99078488|ref|YP_611746.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ruegeria sp. TM1040] gi|99035626|gb|ABF62484.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ruegeria sp. TM1040] Length = 295 Score = 318 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 196/299 (65%), Positives = 248/299 (82%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QGLTG GTFHTEQAI Y T++VGG+ P KG +++PVF Sbjct: 1 MAVLIDENTKVICQGLTGSQGTFHTEQAIAY-GTKMVGGVTPGKGGQTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++V+ LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVQRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQS+A Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDIGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVL++FL D+ T+SI+M+GEIGGSAEEEAA+F+ ++ K+GR KPI Sbjct: 176 VGIGGDPIKGTEHIDVLDMFLDDDETQSIIMIGEIGGSAEEEAAEFIAEQKKKGRWKPIA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AMK AGI +A SPA +G ++ + + + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIVVADSPATLGEAVQKAIAN 294 >gi|254796634|ref|YP_003081470.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Neorickettsia risticii str. Illinois] gi|254589871|gb|ACT69233.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Neorickettsia risticii str. Illinois] Length = 290 Score = 318 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 181/298 (60%), Positives = 224/298 (75%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+K T+V+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MAILVNKETRVICQGFTGHQGTFHSEQAIEY-GTKMVGGVTPGKGGQMHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +AK+ T ANA+VIYVP A DAI+E+++AEI LIVCITEGIPV DM+RVK+ L S Sbjct: 56 TVYQAKKETGANATVIYVPAPFAMDAILEAVDAEIELIVCITEGIPVQDMMRVKSALSNS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPGI+TP CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQST Sbjct: 116 KSLLIGPNCPGIITPGECKIGIMPGYIHKRGKVGIVSRSGTLTYEAVAQTTQMGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDPVKG F+D +++FL D TE+IVM+GEIGGSAEE+A LK KKP V Sbjct: 176 IGVGGDPVKGLSFVDCVKMFLDDPETEAIVMIGEIGGSAEEKACALLK---SSQTKKPTV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAPPG+ MGHAGA+IS AE KI MK+AG+ IA +PA IG+++ +L+ Sbjct: 233 GFIAGATAPPGKRMGHAGAIISSSDESAESKIRVMKDAGVVIAETPALIGKTVADLIA 290 >gi|95928578|ref|ZP_01311325.1| succinyl-CoA synthetase, alpha subunit [Desulfuromonas acetoxidans DSM 684] gi|95135368|gb|EAT17020.1| succinyl-CoA synthetase, alpha subunit [Desulfuromonas acetoxidans DSM 684] Length = 292 Score = 318 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 165/299 (55%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+VQG+TGK G FHT + Y T +V G+ P KG + G +PVF Sbjct: 1 MSILINKDTKVIVQGMTGKTGMFHTRECRDY-GTNIVAGVTPGKGGIHVEG----IPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T N S+I+VPP GA DAI+E+ EA + L+VCITEG+PV DMV + +E S Sbjct: 56 TMEEAVRITGGNVSMIFVPPPGAADAILEACEAGVDLVVCITEGVPVRDMVMARQVVEDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++L+GPNCPG++TP +CKIGIMPG I + G +G++SRSGTLTYEAV Q + GLGQST Sbjct: 116 PTKLVGPNCPGLITPGACKIGIMPGYIHKPGKIGVVSRSGTLTYEAVKQLTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G +FIDVLE+F D TE ++M+GEIGGSAEE+AAQ++++ KP+ Sbjct: 176 VGIGGDPIIGLKFIDVLEMFNNDPETEGVLMIGEIGGSAEEDAAQWVQEHM----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAPPG+ MGHAGA+ISGGKG AEDKI A+ E G+ ++ SP +G+++++ LG Sbjct: 232 AFIAGQTAPPGKRMGHAGAIISGGKGRAEDKIAALTECGVTVSTSPTGMGQAMLKALGR 290 >gi|91076012|ref|XP_966490.1| PREDICTED: similar to succinyl-CoA synthetase small subunit, putative isoform 1 [Tribolium castaneum] gi|91076014|ref|XP_975865.1| PREDICTED: similar to succinyl-CoA synthetase small subunit, putative isoform 2 [Tribolium castaneum] gi|270014681|gb|EFA11129.1| hypothetical protein TcasGA2_TC004730 [Tribolium castaneum] Length = 330 Score = 318 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 178/301 (59%), Positives = 230/301 (76%), Gaps = 6/301 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++ + NTKV+ QG TGK GTFH++QAI Y T++VGG+ P KG +++PVF Sbjct: 32 MNLKLTGNTKVICQGFTGKQGTFHSKQAIEY-GTKMVGGVSPGKGGKTH----LDLPVFN 86 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EK 119 +V EAK T A+ASVIYVPP GA AI+E+++AEIPLIVCITEGIP DMV+VK RL + Sbjct: 87 SVKEAKAATNADASVIYVPPPGAAAAILEAMDAEIPLIVCITEGIPQQDMVKVKHRLLRQ 146 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + SRL+GPNCPGI+ P+ CKIGIMPG I +KG VG++SRSGTLTYEAV QT+Q GLGQ+ Sbjct: 147 NKSRLVGPNCPGIIAPEQCKIGIMPGHIHQKGVVGVVSRSGTLTYEAVHQTTQVGLGQTL 206 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA++L KP+ Sbjct: 207 CVGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEQAAEYLMQHNTGPNAKPV 266 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V F+AG +APPGR MGHAGA+ISGGKGGA+DKINA+++AG + SPA++G L++ + Sbjct: 267 VSFIAGLSAPPGRRMGHAGAIISGGKGGAQDKINALEKAGAIVTKSPAQMGNELLKEMRR 326 Query: 300 L 300 L Sbjct: 327 L 327 >gi|325294006|ref|YP_004279870.1| succinyl-CoA synthetase subunit alpha [Agrobacterium sp. H13-3] gi|325061859|gb|ADY65550.1| succinyl-CoA synthetase subunit alpha [Agrobacterium sp. H13-3] Length = 300 Score = 318 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 234/299 (78%), Positives = 272/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TK+LVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVNKDTKILVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGSKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAEAKE+T A+ASVIYVPP+GA DAIIE+IEAEIP I CITEGIPV+DMVRVKARL++ Sbjct: 61 ATVAEAKEKTGADASVIYVPPAGAADAIIEAIEAEIPFITCITEGIPVMDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S+SRL+GPNCPGI+TP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SNSRLLGPNCPGIMTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLADEAT+SI+M+GEIGGSAEE+AAQFL DEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADEATQSIIMIGEIGGSAEEDAAQFLIDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMEAAGIKVSPSPARLGKTLVEVLK 299 >gi|253699671|ref|YP_003020860.1| succinyl-CoA synthetase, subunit alpha [Geobacter sp. M21] gi|251774521|gb|ACT17102.1| succinyl-CoA synthetase, alpha subunit [Geobacter sp. M21] Length = 290 Score = 318 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 167/298 (56%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI+++K+T+V+ QG+TG G FH + A Y TQ+VGG+ P KG T G PVF Sbjct: 1 MSIMINKDTRVITQGITGATGLFHAQGAREY-GTQMVGGVTPGKGGTVIDG----FPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A ASVIYVPP A D+I+E+++A + L+ CITEGIPVLDMV+VK L Sbjct: 56 TVAEAVHETGATASVIYVPPPFAADSIMEAVDAGVELVCCITEGIPVLDMVKVKQYLVGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CKIGIMPG I + G +G++SRSGTLTYEAV+Q + GLGQST Sbjct: 116 RTRLVGPNCPGVITPGQCKIGIMPGYIHKPGRIGVVSRSGTLTYEAVWQLTSIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L LF AD T++++M+GEIGG+AEEEAA F+K+ KKP+ Sbjct: 176 VGIGGDPVNGTSHIDCLRLFEADPDTDAVIMIGEIGGNAEEEAAHFVKENM----KKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A +K+ ++E GI +A SPA + ++L+++ Sbjct: 232 AYIAGVTAPPGKRMGHAGAIISGGKGTATEKVAVLRECGISVADSPAEMAQALLQVYK 289 >gi|262281283|ref|ZP_06059065.1| succinyl-CoA synthetase subunit alpha [Acinetobacter calcoaceticus RUH2202] gi|299768993|ref|YP_003731019.1| succinyl-CoA synthetase subunit alpha [Acinetobacter sp. DR1] gi|262257514|gb|EEY76250.1| succinyl-CoA synthetase subunit alpha [Acinetobacter calcoaceticus RUH2202] gi|298699081|gb|ADI89646.1| succinyl-CoA synthetase subunit alpha [Acinetobacter sp. DR1] Length = 296 Score = 318 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 162/301 (53%), Positives = 222/301 (73%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T +++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSAQALDY-GTKVVGGVTPGKGGTTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA T A+ASVIYVP D+I+E++++ + LIV ITEG+P +DM++ K LE Sbjct: 56 TMKEAVRETNADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTIDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G I+ L+LF D T++I+M+GEIGG+AEEEAA+F+K KP Sbjct: 176 TCIGIGGDPIPGMNQIEALQLFQDDPDTDAIIMIGEIGGTAEEEAAEFIKSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGG+G AE+K A + AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGQGTAEEKFAAFERAGMAYTRSPAELGSTMLQVLK 291 Query: 299 S 299 Sbjct: 292 E 292 >gi|284097281|ref|ZP_06385421.1| succinyl-CoA synthetase, alpha subunit [Candidatus Poribacteria sp. WGA-A3] gi|283831205|gb|EFC35175.1| succinyl-CoA synthetase, alpha subunit [Candidatus Poribacteria sp. WGA-A3] Length = 290 Score = 318 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 174/299 (58%), Positives = 221/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+T+V+VQG+TGK G+FH Q Y TQVV G+ P K G +PVF Sbjct: 1 MSILVNKSTRVVVQGITGKEGSFHATQCQAY-GTQVVAGVTPGKAGQEVEG----IPVFH 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A S+I+VPP A DAI+E+ A I L+VCITEGIPV DMVRVK L + Sbjct: 56 TVRDAVKETEATTSLIFVPPPFAADAILEAANAGIWLVVCITEGIPVNDMVRVKRALAST 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+T D CKIGIMPG I RKG VG++SRSGTLTYEAV Q + GLG++T Sbjct: 116 QTRLIGPNCPGIITADECKIGIMPGFIHRKGKVGVISRSGTLTYEAVNQLTNLGLGETTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT +ID+L++F DE T+++VM+GEIGG AEE+AA F+K R KP+V Sbjct: 176 VGIGGDPIIGTGYIDLLQMFEHDEETKAVVMIGEIGGDAEEKAAAFIK----REMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+I+GG+G A+DKI A++ AG+ + +PA IG ++ LGS Sbjct: 232 GFIAGMTAPPGRRMGHAGAIITGGQGTAKDKIAALEAAGVQVVRNPAEIGETVKAALGS 290 >gi|310814642|ref|YP_003962606.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ketogulonicigenium vulgare Y25] gi|308753377|gb|ADO41306.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ketogulonicigenium vulgare Y25] Length = 294 Score = 318 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 198/297 (66%), Positives = 242/297 (81%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+ T+V+ QG+TG GTFH++QA+ Y TQ+ GG+ P KG T G +PVF Sbjct: 1 MAILVNAQTRVICQGITGAQGTFHSQQALDY-GTQLAGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T ANA+ IYVPP A D+I+E+I+AE+PLIV ITEGIPVLDM+RVK L S Sbjct: 56 TVHEAIAKTGANATAIYVPPPFAADSILEAIDAEVPLIVAITEGIPVLDMMRVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP++CKIGIMPGSIF GSVG++SRSGTLTYEAV QT+ GLGQSTA Sbjct: 116 KSRLIGPNCPGVLTPNACKIGIMPGSIFSAGSVGVVSRSGTLTYEAVKQTTDVGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KG+E ID+LE+FLAD ATESI+M+GEIGG+AEEEAAQFLKDE RGR KP Sbjct: 176 VGIGGDPIKGSEHIDILEMFLADPATESIIMIGEIGGTAEEEAAQFLKDEKARGRWKPTA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGAVISGG G AE KI+AM+ AGI +A SPA +G+++++ + Sbjct: 236 GFIAGRTAPPGRRMGHAGAVISGGTGDAESKIDAMRSAGIVVADSPATLGQAVMQAI 292 >gi|332376625|gb|AEE63452.1| unknown [Dendroctonus ponderosae] Length = 328 Score = 318 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 177/300 (59%), Positives = 228/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ N+KV+ QG TGK GTFH++QAI Y T+VVGG+ P KG +++PVF T Sbjct: 31 NLKLNANSKVICQGFTGKQGTFHSKQAIEY-GTKVVGGVSPGKGGKTH----LDLPVFNT 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA+ T A+A+VIYVPP GA AI E+I+AE+PLIVCITEGIP DMVRVK +L + Sbjct: 86 VKEARNATGADATVIYVPPPGAAAAINEAIDAEVPLIVCITEGIPQHDMVRVKHKLLRQG 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P+ CKIGIMPG I +KG VG++SRSGTLTYEAV QT+Q GLGQ+ Sbjct: 146 KSRLIGPNCPGIIAPEQCKIGIMPGHIHQKGIVGVVSRSGTLTYEAVHQTTQVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEQAADYLNKHNSGPNAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA+DKINA+++AG+ + SPA++G L++ + L Sbjct: 266 SFIAGISAPPGRRMGHAGAIISGGKGGAQDKINALEKAGVIVTRSPAQMGTELLKEMRRL 325 >gi|284007865|emb|CBA73775.1| succinyl-CoA synthetase alpha chain [Arsenophonus nasoniae] Length = 291 Score = 318 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 174/299 (58%), Positives = 221/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+I + I LI+ ITEGIP LDM+ VKA+L+++ Sbjct: 56 TVREAVKATGATASVIYVPARFCKDSILEAINSGIKLIITITEGIPTLDMLIVKAKLDET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPGI+TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRMIGPNCPGIITPGECKIGIQPGHIHKAGKVGIVSRSGTLTYEAVKQTTDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF AD TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQADPQTEAIVMIGEIGGTAEEEAAAYIKQHI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG ++ +L+ S Sbjct: 232 AYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLAEIGAAVKQLVTS 290 >gi|323143444|ref|ZP_08078127.1| succinate-CoA ligase, alpha subunit [Succinatimonas hippei YIT 12066] gi|322416729|gb|EFY07380.1| succinate-CoA ligase, alpha subunit [Succinatimonas hippei YIT 12066] Length = 292 Score = 318 bits (814), Expect = 9e-85, Method: Composition-based stats. Identities = 171/299 (57%), Positives = 222/299 (74%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+ QG+TG GT H+EQ + Y T++VGG+ P +G + G +PVF Sbjct: 1 MSILVNKDTKVICQGITGSQGTAHSEQCLAY-GTKLVGGVTPGRGGSSHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A S+I+VPP A D+I E+I+A I LIVCITEGIPVLDM+RVKARL +S Sbjct: 56 TVREAVEVTQATTSMIFVPPPFAADSIFEAIDAGIELIVCITEGIPVLDMLRVKARLRES 115 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RLIGPNCPGI+TP CK+GIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GKTRLIGPNCPGIVTPGECKVGIMPGYIHTPGKVGIVSRSGTLTYEAVKQTTDAGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP++G+ F+D+L+LF D TE++VMVGEIGG+AE++AA ++K+ KP+ Sbjct: 176 CVGIGGDPIQGSNFVDMLKLFEEDPQTEAVVMVGEIGGTAEQDAAMWIKEHM----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG TAP G+ MGHAGA+I+GG+G A+ K A++EAG+ + P+ A I L E G Sbjct: 232 VSYIAGSTAPQGQRMGHAGAIITGGQGTAQAKQKALREAGVTVVPTAADIADGLREATG 290 >gi|114563511|ref|YP_751024.1| succinyl-CoA synthetase, alpha subunit [Shewanella frigidimarina NCIMB 400] gi|114334804|gb|ABI72186.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Shewanella frigidimarina NCIMB 400] Length = 290 Score = 318 bits (814), Expect = 9e-85, Method: Composition-based stats. Identities = 174/294 (59%), Positives = 217/294 (73%), Gaps = 9/294 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLINKDTKVICQGFTGGQGTFHSEQAIAY-GTQMVGGVSPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A A+VIYVP DAI+E+I+A + LIVCITEGIP LDM++VK +LE++ Sbjct: 56 TVKDAVAATGATATVIYVPAPFCKDAILEAIDAGLELIVCITEGIPTLDMLQVKVKLEET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVLE+F D TE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGNAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 ++AG TAP G+ MGHAGA+I+GGKG AEDK A++ AG+ S A IG++L Sbjct: 232 SYIAGVTAPEGKRMGHAGAIIAGGKGTAEDKFAALEAAGVTTVRSLADIGKALR 285 >gi|301167410|emb|CBW26992.1| succinyl-CoA synthetase alpha chain [Bacteriovorax marinus SJ] Length = 291 Score = 318 bits (814), Expect = 9e-85, Method: Composition-based stats. Identities = 165/299 (55%), Positives = 219/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++++TK++ G TGK GTFH+ Q+ Y T VGG+ P KG T G PVF Sbjct: 1 MAILINRDTKLITVGFTGKQGTFHSLQSRDY-GTNFVGGVTPGKGGTVHEG----FPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T ANA++I VPP A D+I+E I+A +PL++ ITEGIP++DMV+VKA L+ S Sbjct: 56 TVKEAVDKTEANAAMIMVPPPFAADSILECIDAGMPLVIAITEGIPIVDMVKVKAALKDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAVFQ +Q +GQST Sbjct: 116 NTRLIGPNCPGLITPGECKIGIMPGHIHMPGKVGVVSRSGTLTYEAVFQLTQRDIGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLELF D TE+++M+GEIGG+AE +A ++++ + KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLELFEKDPDTEAVIMIGEIGGNAETDAGRWIQ----KNMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG +AP G+ MGHAGA+ISGG AE K ++E G+ IA SPA +G + E+LG Sbjct: 232 SFIAGASAPAGKRMGHAGAIISGGDDTAEAKFRILEECGVTIARSPAELGHKMEEVLGK 290 >gi|301121760|ref|XP_002908607.1| succinyl-CoA ligase subunit alpha, mitochondrial precursor [Phytophthora infestans T30-4] gi|262103638|gb|EEY61690.1| succinyl-CoA ligase subunit alpha, mitochondrial precursor [Phytophthora infestans T30-4] Length = 339 Score = 318 bits (814), Expect = 9e-85, Method: Composition-based stats. Identities = 178/298 (59%), Positives = 220/298 (73%), Gaps = 8/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + ++K+TKV+ QG TGK GTFH++QAI Y T +VGG+ PKKG + G +PVF TV Sbjct: 47 VWINKDTKVICQGFTGKQGTFHSQQAIEY-GTNMVGGVTPKKGGSTHLG----LPVFNTV 101 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSS 121 AEAK+ T A+ASVIYVPP +IIE+IEA+IPL+V ITEGIP DMV+VK L +S+ Sbjct: 102 AEAKKETGADASVIYVPPPFCAASIIEAIEAKIPLVVAITEGIPQQDMVKVKWHLRNQST 161 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CK+GIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQST + Sbjct: 162 TRLIGPNCPGIIKPGECKMGIMPGYIHQKGKIGIVSRSGTLTYEAVAQTTALGLGQSTVI 221 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE F D TE I+MVGEIGGSAEEEAA++L KP+V Sbjct: 222 GIGGDPFNGTNFIDCLERFTNDPETEGIIMVGEIGGSAEEEAAEWLMAH--GDPNKPVVS 279 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA++SGGKG A K A++ AG+ + SPAR+G +L E + Sbjct: 280 FIAGTTAPPGRRMGHAGAIVSGGKGTAAGKFAALEAAGVAVTRSPARLGVTLYEEMQK 337 >gi|308068643|ref|YP_003870248.1| succinyl-CoA synthetase subunit alpha (SCS-alpha) [Paenibacillus polymyxa E681] gi|305857922|gb|ADM69710.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Paenibacillus polymyxa E681] Length = 309 Score = 318 bits (814), Expect = 9e-85, Method: Composition-based stats. Identities = 176/304 (57%), Positives = 230/304 (75%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSILVDK+TKV+ QG+TGK FH + A+ Y TQ+VGG P KG T G V Sbjct: 1 MSILVDKHTKVITQGITGKTALFHAKGALDY-GTQMVGGTSPGKGGTEVEITLENGQQVK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV+EAKE T A ASVIYVPP+ A D+I+E+++AE+ L++CITEGIPVLDM+RVK Sbjct: 60 LPVFNTVSEAKEATGATASVIYVPPAFAADSILEAVDAELDLVICITEGIPVLDMIRVKR 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +E + LIGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAV Q + G+ Sbjct: 120 FMEGKKTVLIGPNCPGVITPGECKIGIMPGYIHLPGHVGVVSRSGTLTYEAVHQLTTRGI 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQS+AVGIGGDPVKG+EFID+L+ F D T +++M+GEIGG+AEEEAA++++D Sbjct: 180 GQSSAVGIGGDPVKGSEFIDILQRFNEDPNTHAVIMIGEIGGTAEEEAAEWIRDNM---- 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VGF+ G TAPPG+ MGHAGA+ISGGKG A++KI ++ GI +AP+P+ +G +LV Sbjct: 236 TKPVVGFIGGVTAPPGKRMGHAGAIISGGKGTAKEKIATLEACGIKVAPTPSEMGSTLVS 295 Query: 296 LLGS 299 +L + Sbjct: 296 VLEA 299 >gi|260549009|ref|ZP_05823231.1| succinyl-CoA synthetase subunit alpha [Acinetobacter sp. RUH2624] gi|260408177|gb|EEX01648.1| succinyl-CoA synthetase subunit alpha [Acinetobacter sp. RUH2624] Length = 296 Score = 318 bits (814), Expect = 9e-85, Method: Composition-based stats. Identities = 162/301 (53%), Positives = 223/301 (74%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T +++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSAQALDY-GTKVVGGVTPGKGGTTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA T A+ASVIYVP D+I+E++++ + LIV ITEG+P +DM++ K LE Sbjct: 56 TMKEAVRETNADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTIDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G I+ L+LF D T++I+M+GEIGG+AEEEAA+F+K KP Sbjct: 176 TCIGIGGDPIPGMNQIEALQLFQDDPDTDAIIMIGEIGGTAEEEAAEFIKSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGG+G AE+K A ++AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGQGTAEEKFAAFEKAGMAYTRSPAELGSTMLQVLK 291 Query: 299 S 299 Sbjct: 292 E 292 >gi|23098999|ref|NP_692465.1| succinyl-CoA synthetase subunit alpha [Oceanobacillus iheyensis HTE831] gi|22777227|dbj|BAC13500.1| succinyl-CoA synthetase alpha subunit [Oceanobacillus iheyensis HTE831] Length = 300 Score = 318 bits (814), Expect = 9e-85, Method: Composition-based stats. Identities = 167/299 (55%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K+TKV+VQG+TG FHT+Q + Y T++V G+ PKKG T G VPV+ Sbjct: 1 MSVYINKDTKVIVQGITGGTARFHTKQMLEY-GTKIVAGVTPKKGGTEVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A ASVIYVP A DAI+E+ +AE+ L++CITE IPV+DMV+VK +E Sbjct: 56 TVKDAVDATGATASVIYVPAPFAADAILEATDAELDLVICITEHIPVMDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D KIGIMPG I +KG +G++SRSGTLTYEAV Q S+ G GQ+TA Sbjct: 116 KTRLVGPNCPGVITADETKIGIMPGYIHKKGHIGVVSRSGTLTYEAVHQLSEAGYGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D TE+++M+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLDAFNQDPETEAVIMIGEIGGTAEEEAAEWVKANM----NKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G TAPPG+ MGHAGA+ISGGKG A++KI M+ AGI +A +PA +G ++++ L Sbjct: 232 GFIGGATAPPGKRMGHAGAIISGGKGTADEKIRTMEAAGIKVADTPAVMGETMIKALKE 290 >gi|148262239|ref|YP_001228945.1| succinyl-CoA synthetase, alpha subunit [Geobacter uraniireducens Rf4] gi|148265507|ref|YP_001232213.1| succinyl-CoA synthetase, alpha subunit [Geobacter uraniireducens Rf4] gi|146395739|gb|ABQ24372.1| succinyl-CoA synthetase, alpha subunit [Geobacter uraniireducens Rf4] gi|146399007|gb|ABQ27640.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Geobacter uraniireducens Rf4] Length = 290 Score = 318 bits (814), Expect = 9e-85, Method: Composition-based stats. Identities = 164/298 (55%), Positives = 220/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG+TG G FH + A Y TQ+VGG+ P KG T G PV+ Sbjct: 1 MSILINKDTKVITQGITGATGLFHAQGAREY-GTQMVGGVTPGKGGTTIDG----FPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A ASVIYVPP A D+I+E+++A I L+ CITEGIPVLDMV+VK ++ Sbjct: 56 TVREAVLQTGATASVIYVPPPFAADSIMEAVDAGIELVCCITEGIPVLDMVKVKQYMKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CKIGIMPG I + G +G++SRSGTLTYEAV+Q + GLGQST Sbjct: 116 KTRLVGPNCPGVITPGQCKIGIMPGYIHKPGKIGVVSRSGTLTYEAVWQLTSLGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT +DVL++F AD TE+++M+GEIGG++EEE A F+K+ KP+ Sbjct: 176 VGIGGDPVNGTNHLDVLKMFEADPDTEAVIMIGEIGGTSEEEGAYFVKEHM----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A +K+ ++E GI +A SPA + ++L+++ Sbjct: 232 AYIAGVTAPPGKRMGHAGAIISGGKGTATEKVAVLEECGISVAASPAEMAQALLKIYK 289 >gi|15889892|ref|NP_355573.1| succinyl-CoA synthetase subunit alpha [Agrobacterium tumefaciens str. C58] gi|15157841|gb|AAK88358.1| succinyl-CoA synthetase alpha chain [Agrobacterium tumefaciens str. C58] Length = 300 Score = 318 bits (814), Expect = 9e-85, Method: Composition-based stats. Identities = 232/299 (77%), Positives = 271/299 (90%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TK+LVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVNKDTKILVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGSKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAEAKE+T A+ASVIYVPP+GA DAIIE+IEAEIP I CITEGIPV+DMVRVKARL++ Sbjct: 61 ATVAEAKEKTGADASVIYVPPAGAADAIIEAIEAEIPFITCITEGIPVMDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGI+TP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGIMTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFID+LE+FLAD+AT+SI+M+GEIGGSAEE+AAQFL DEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDILEMFLADDATQSIIMIGEIGGSAEEDAAQFLIDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMEAAGIKVSPSPARLGKTLVEVLK 299 >gi|307170861|gb|EFN62972.1| Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Camponotus floridanus] Length = 333 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 184/300 (61%), Positives = 232/300 (77%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +D NTKV+ QG TGK GTFH +QAI Y T++VGG+ PKK T G PVF T Sbjct: 34 NLKIDANTKVICQGFTGKQGTFHCQQAIDY-GTKIVGGVSPKKAGTEHLGK----PVFKT 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE T A+ASVIYVPP A AI+ESI+AE+PLIVCITEGIP DMV+VK RL E++ Sbjct: 89 VKEAKEATGASASVIYVPPPAAASAIMESIDAEMPLIVCITEGIPQHDMVKVKRRLLEQN 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 149 KSRLIGPNCPGIIAPEQCKIGIMPGHIHQKGKIGIVSRSGTLTYEAVNQTTLTGLGQTLC 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID L++FL D + I+M+GEIGGSAEE AA++L ++ G+ KP+V Sbjct: 209 VGIGGDPFNGTDFIDCLDVFLTDPECDGIIMIGEIGGSAEELAAEYLIEKNTGGKAKPVV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPGR MGHAGA+ISGG+GGA+DKINA+++AG+ + SPA++G L++ + L Sbjct: 269 SFIAGITAPPGRRMGHAGAIISGGRGGAQDKINALEKAGVIVTRSPAQMGNELLKEMTRL 328 >gi|75120763|sp|Q6DQL1|SUCA2_SOLLC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial; Short=SlSCoALalpha2; Flags: Precursor gi|49617539|gb|AAT67464.1| succinyl-CoA ligase alpha 2 subunit [Solanum lycopersicum] Length = 337 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 187/298 (62%), Positives = 232/298 (77%), Gaps = 9/298 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF T Sbjct: 43 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNT 97 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS- 120 VAEAK T ANASV+YVPP A AI+E++EAE+ L+VCITEGIP DMVRVKA L+K Sbjct: 98 VAEAKVETKANASVVYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALKKQL 157 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 158 RTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTC 217 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+AD TE IV++GEIGG+AEE+AA +K+ G +KP+V Sbjct: 218 VGIGGDPFNGTNFVDCLERFIADPQTEGIVLIGEIGGTAEEDAAALIKE---SGTQKPVV 274 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA++SGGKG A+DKI A+KEAG+ + SPA+IG +++++ Sbjct: 275 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALKEAGVTVCESPAKIGVTMLDVFK 332 >gi|296532582|ref|ZP_06895287.1| succinate--CoA ligase (ADP-forming) [Roseomonas cervicalis ATCC 49957] gi|296267073|gb|EFH12993.1| succinate--CoA ligase (ADP-forming) [Roseomonas cervicalis ATCC 49957] Length = 296 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 195/299 (65%), Positives = 235/299 (78%), Gaps = 7/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVD NTKV+ QG TG GTFH EQ I Y ++ VGG+ P KG G +PVF Sbjct: 1 MAILVDANTKVMTQGFTGSQGTFHAEQGIAY-GSKYVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAE E T A ASVIYVPP AGD+I+E+I+AEIPLI+CITEGIPV DM++VK L S Sbjct: 56 TVAECAEATGATASVIYVPPPFAGDSILEAIDAEIPLIICITEGIPVTDMIKVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++G+VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGTVGIVSRSGTLTYEAVAQTTAAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK--KP 238 VGIGGDPVKGT+F +VLE+FLAD T+SI+M+GEIGG +E +AA+FL E K G K KP Sbjct: 176 VGIGGDPVKGTDFTEVLEMFLADPETQSIIMIGEIGGQSEIQAAEFLGRENKPGSKNYKP 235 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG TAPPGR MGHAGAVISGGK AE K++AM+EAGI +A SPA +G ++V+ L Sbjct: 236 VVGFIAGATAPPGRRMGHAGAVISGGKDTAEAKMSAMREAGIHVAESPAALGSTMVKAL 294 >gi|253573509|ref|ZP_04850852.1| succinyl-CoA synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251847037|gb|EES75042.1| succinyl-CoA synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 309 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 177/304 (58%), Positives = 229/304 (75%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSILVDKNTKV+ QG+TGK FH + A+ Y TQ+VGG P KG T G V+ Sbjct: 1 MSILVDKNTKVITQGITGKTALFHAKGALDY-GTQMVGGTSPGKGGTKVDITLESGETVS 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV EAKE T A ASVIYVPP+ A D+I+E++EAE+ L++CITEGIPVLDMV+VK Sbjct: 60 LPVFNTVREAKEATGATASVIYVPPAFAADSILEAVEAELDLVICITEGIPVLDMVKVKR 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +E + LIGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAV Q + G+ Sbjct: 120 YMEGKKTVLIGPNCPGVITPGECKIGIMPGYIHLPGHVGVVSRSGTLTYEAVHQLTTRGI 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQS+AVGIGGDPVKG+EFID+L F D+ T +++M+GEIGG+AEEEAA++++ + Sbjct: 180 GQSSAVGIGGDPVKGSEFIDILRRFNDDDNTHAVIMIGEIGGTAEEEAAEWIQ----KNM 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VGF+ G TAPPG+ MGHAGA+ISGGKG A++KI ++ GI +AP+P+ +G +LV Sbjct: 236 TKPVVGFIGGVTAPPGKRMGHAGAIISGGKGTAKEKIAKLESCGIKVAPTPSEMGATLVS 295 Query: 296 LLGS 299 +L Sbjct: 296 VLEE 299 >gi|116749137|ref|YP_845824.1| succinyl-CoA synthetase subunit alpha [Syntrophobacter fumaroxidans MPOB] gi|116698201|gb|ABK17389.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Syntrophobacter fumaroxidans MPOB] Length = 293 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 173/300 (57%), Positives = 212/300 (70%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI VDKNT++LVQG+TG+ G FHT Y T VV G+ P KG G +PVF Sbjct: 1 MSIWVDKNTRLLVQGITGREGQFHTINCKAY-GTNVVAGVTPGKGGQAVEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T ANA++++VPP DAI+E+IEA IPLIV ITEGIPV+DM++VK L+ S Sbjct: 56 TVAKAVKETKANAAMVFVPPPFCADAILEAIEAGIPLIVAITEGIPVMDMMKVKNYLKSS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP CKIGI PG I G VGI+SRSGTLTYEAV Q + G+GQST Sbjct: 116 KSRLIGPNCPGIITPGQCKIGIQPGHIHTPGPVGIVSRSGTLTYEAVHQIGKVGIGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT FID L+ F D T++I+MVGEIGGSAEE+AA F+K KP++ Sbjct: 176 IGIGGDPVNGTNFIDCLDAFQKDPQTKAIIMVGEIGGSAEEDAADFIKKNV----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG TAPPGR MGHAGA+ISG G A+ KI AM+ AGI + S +G+ E + Sbjct: 232 GFIAGLTAPPGRRMGHAGAIISGSSGTAQGKIKAMRAAGITVVESLGDMGQIAKEAFKKV 291 >gi|328545846|ref|YP_004305955.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [polymorphum gilvum SL003B-26A1] gi|326415586|gb|ADZ72649.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Polymorphum gilvum SL003B-26A1] Length = 302 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 230/301 (76%), Positives = 269/301 (89%), Gaps = 3/301 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGG---NVNVP 57 MSILV+K+TKV+VQGLTGK GTFHTEQA+ Y T++V G+HP KG WT G + +P Sbjct: 1 MSILVNKDTKVIVQGLTGKTGTFHTEQALQYYGTRMVAGVHPAKGGETWTSGVDASATLP 60 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 ++ +VAEAK+ T A+ASVIYVPP+GAG AIIE+IEAEIP IVCITEGIPV DMV+VKARL Sbjct: 61 IYASVAEAKDATGADASVIYVPPAGAGAAIIEAIEAEIPFIVCITEGIPVADMVKVKARL 120 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 EKS SRL+GPNCPGILTP+ CKIGIMPGSIF+KGSVGI+SRSGTLTYEAVFQTS GLGQ Sbjct: 121 EKSKSRLLGPNCPGILTPEECKIGIMPGSIFKKGSVGIVSRSGTLTYEAVFQTSNAGLGQ 180 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 +TAVGIGGDPVKGTEFIDVLE+FLAD+AT+SI+M+GEIGGSAEE+AAQFL+DEAKRGRKK Sbjct: 181 TTAVGIGGDPVKGTEFIDVLEMFLADDATQSIIMIGEIGGSAEEDAAQFLRDEAKRGRKK 240 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+ GF+AG+TAP GRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPA++G +LVE+L Sbjct: 241 PMAGFIAGRTAPKGRTMGHAGAVISGGKGGAEDKIAAMEAAGIRVSPSPAKLGETLVEVL 300 Query: 298 G 298 Sbjct: 301 K 301 >gi|169632628|ref|YP_001706364.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii SDF] gi|169794950|ref|YP_001712743.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii AYE] gi|184159271|ref|YP_001847610.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii ACICU] gi|213157645|ref|YP_002320443.1| succinyl-CoA synthetase, alpha subunit [Acinetobacter baumannii AB0057] gi|215482498|ref|YP_002324684.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Acinetobacter baumannii AB307-0294] gi|239502281|ref|ZP_04661591.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii AB900] gi|260557317|ref|ZP_05829533.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii ATCC 19606] gi|301346631|ref|ZP_07227372.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii AB056] gi|301510303|ref|ZP_07235540.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii AB058] gi|301596859|ref|ZP_07241867.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii AB059] gi|332854240|ref|ZP_08435260.1| succinyl-CoA synthetase, alpha subunit [Acinetobacter baumannii 6013150] gi|332866317|ref|ZP_08436922.1| succinyl-CoA synthetase, alpha subunit [Acinetobacter baumannii 6013113] gi|332872532|ref|ZP_08440501.1| succinyl-CoA synthetase, alpha subunit [Acinetobacter baumannii 6014059] gi|169147877|emb|CAM85740.1| succinyl-CoA synthetase alpha chain [Acinetobacter baumannii AYE] gi|169151420|emb|CAP00151.1| succinyl-CoA synthetase alpha chain [Acinetobacter baumannii] gi|183210865|gb|ACC58263.1| Succinyl-CoA synthetase, alpha subunit [Acinetobacter baumannii ACICU] gi|193078185|gb|ABO13132.2| succinyl-CoA synthetase alpha chain [Acinetobacter baumannii ATCC 17978] gi|213056805|gb|ACJ41707.1| succinyl-CoA synthetase, alpha subunit [Acinetobacter baumannii AB0057] gi|213988850|gb|ACJ59149.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Acinetobacter baumannii AB307-0294] gi|260409423|gb|EEX02725.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii ATCC 19606] gi|322509185|gb|ADX04639.1| sucD [Acinetobacter baumannii 1656-2] gi|323519213|gb|ADX93594.1| succinyl-CoA synthetase subunit alpha [Acinetobacter baumannii TCDC-AB0715] gi|325123208|gb|ADY82731.1| succinyl-CoA synthetase alpha chain [Acinetobacter calcoaceticus PHEA-2] gi|332728165|gb|EGJ59553.1| succinyl-CoA synthetase, alpha subunit [Acinetobacter baumannii 6013150] gi|332734665|gb|EGJ65769.1| succinyl-CoA synthetase, alpha subunit [Acinetobacter baumannii 6013113] gi|332739218|gb|EGJ70076.1| succinyl-CoA synthetase, alpha subunit [Acinetobacter baumannii 6014059] Length = 296 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 162/301 (53%), Positives = 223/301 (74%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T +++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSAQALDY-GTKVVGGVTPGKGGTTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA T A+ASVIYVP D+I+E++++ + LIV ITEG+P +DM++ K LE Sbjct: 56 TMKEAVRETNADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTIDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G I+ L+LF D T++I+M+GEIGG+AEEEAA+F+K KP Sbjct: 176 TCIGIGGDPIPGMNQIEALQLFQDDPDTDAIIMIGEIGGTAEEEAAEFIKSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGG+G AE+K A ++AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGQGTAEEKFAAFEKAGMAYTRSPAELGSTMLQVLK 291 Query: 299 S 299 Sbjct: 292 E 292 >gi|153873563|ref|ZP_02002105.1| succinyl-CoA synthetase alpha chain [Beggiatoa sp. PS] gi|152069972|gb|EDN67896.1| succinyl-CoA synthetase alpha chain [Beggiatoa sp. PS] Length = 291 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 172/300 (57%), Positives = 222/300 (74%), Gaps = 11/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD +TKV+ QG TGK GTFH+EQ I Y T++VGG+ P +G +++PVF Sbjct: 1 MSILVDADTKVICQGFTGKQGTFHSEQCIAY-GTKLVGGVTPGRGGQTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A S+IYVP + A DAI+E+ + I LIVCITEGIPVLDM++VK L Sbjct: 56 TVREAVEKTGATVSMIYVPAAFAADAILEAANSGIQLIVCITEGIPVLDMLKVKTALTDH 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RLIGPNCPGI+TP+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 116 YPQVRLIGPNCPGIITPNGCKIGIMPGFIHQRGRIGIVSRSGTLTYEAVAQTTQNGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +G+GGDP+ G +FID L+LF D TE IVMVGEIGG+ EE AA ++K KP Sbjct: 176 TCIGMGGDPIHGMDFIDCLKLFEQDPQTEGIVMVGEIGGTDEEAAASYIKSAI----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V ++AG TAPPG+ MGHAGA+I+GGKG A++KI A++ AG+ +A +PA IG+ +++ L Sbjct: 232 VVAYIAGVTAPPGKRMGHAGAIIAGGKGTAQEKIAALEAAGVSVARNPAEIGQRILKHLS 291 >gi|294054272|ref|YP_003547930.1| succinyl-CoA synthetase, alpha subunit [Coraliomargarita akajimensis DSM 45221] gi|293613605|gb|ADE53760.1| succinyl-CoA synthetase, alpha subunit [Coraliomargarita akajimensis DSM 45221] Length = 294 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 170/301 (56%), Positives = 220/301 (73%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+T+++VQG+TGK GTFHT+Q Y T VV G+ P KG W VPV Sbjct: 1 MSILVNKDTRLVVQGITGKTGTFHTKQCAEY-GTNVVAGVTPGKGGQLWEDK---VPVCN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TVAEA + ANASVIYVPP+ AGD+I+E+IEAEIPL++CITEG+PV DM ++ RL Sbjct: 57 TVAEAVKEHGANASVIYVPPAFAGDSILEAIEAEIPLVICITEGVPVRDMAEIRRRLYFH 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RLIGPNCPGI+TP CKIGIMPG I + G VG++SRSGTLTYEAV+Q +Q G GQS Sbjct: 117 NCKTRLIGPNCPGIITPGECKIGIMPGYIHKPGRVGVVSRSGTLTYEAVWQLTQRGHGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ GT D + +F D T++I+M+GEIGGSAEEEA ++K+ KKP Sbjct: 177 TCIGIGGDPINGTSQTDAIRMFNEDPDTDAIIMIGEIGGSAEEEACAYIKEHV----KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + GF+AG +AP GRTMGHAGA++S G G AE K AM++AG+ IA +P+ I +L+++ Sbjct: 233 VAGFIAGASAPKGRTMGHAGAIVSASGAGTAEAKFAAMEDAGVSIARNPSEIADALLKIY 292 Query: 298 G 298 Sbjct: 293 K 293 >gi|270157990|ref|ZP_06186647.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Legionella longbeachae D-4968] gi|289163744|ref|YP_003453882.1| succinyl-CoA synthetase, alpha subunit [Legionella longbeachae NSW150] gi|269990015|gb|EEZ96269.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Legionella longbeachae D-4968] gi|288856917|emb|CBJ10731.1| succinyl-CoA synthetase, alpha subunit [Legionella longbeachae NSW150] Length = 292 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 176/299 (58%), Positives = 219/299 (73%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K TKVL QG TGK GT+H+EQAI Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSVLVNKQTKVLCQGFTGKQGTYHSEQAIAY-GTQMVGGVTPGKGGQMHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA + T A ASVIYVP D+I+E+ +A I LIVCITEG+PVLDM++VK LE + Sbjct: 56 TMREAVQETKAEASVIYVPAPFCKDSILEAADAGIQLIVCITEGVPVLDMLQVKVYLENN 115 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RLIGPNCPGI+TP CKIGIMPGSI G VGI+SRSGTLTYEAV QT+ +G GQST Sbjct: 116 TQARLIGPNCPGIITPGECKIGIMPGSIHLPGKVGIVSRSGTLTYEAVKQTTDKGFGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT FID L LF D T++I+MVGEIGGSAEEEAA+++K KP+ Sbjct: 176 CIGIGGDPIPGTNFIDALALFEQDSQTQAIIMVGEIGGSAEEEAAEYIKSHVS----KPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG TAP G+ MGHAGA+ISGGKG A +K A++ AG+ SPA +G ++ E+ G Sbjct: 232 VSYIAGVTAPAGKRMGHAGAIISGGKGTAAEKYAALEAAGVRTVRSPADLGDAVAEVTG 290 >gi|144898024|emb|CAM74888.1| Succinyl-CoA synthetase alpha chain [Magnetospirillum gryphiswaldense MSR-1] Length = 291 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 228/298 (76%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+ NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG + ++++PVF Sbjct: 1 MAVLVNANTKVICQGFTGAQGTFHSEQAIAY-GTKMVGGVTPGKGGS----KHLDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK +T NASVIYVPP A DAI+E+I+AEI L VCITEGIPV DM+ VK L S Sbjct: 56 TVAEAKAKTGCNASVIYVPPPFAADAILEAIDAEIELAVCITEGIPVADMLTVKRALVGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+ GLGQ+T Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHQRGKVGIVSRSGTLTYEAVAQTTAAGLGQTTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT F+D L++FL D TE+I+M+GEIGG AE + A+ L+ KKP V Sbjct: 176 IGIGGDPINGTNFVDSLQMFLDDPETEAIIMIGEIGGDAEVQGAELLRSSKI---KKPTV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGAVISGG A+ KI+AM+ AGI +A SPA +G +++++L Sbjct: 233 GFIAGRTAPPGRRMGHAGAVISGGNDTADFKIDAMRSAGIAVADSPASLGSTMLKVLK 290 >gi|222150039|ref|YP_002550996.1| succinyl-CoA synthetase subunit alpha [Agrobacterium vitis S4] gi|221737021|gb|ACM37984.1| succinyl-CoA synthetase alpha chain [Agrobacterium vitis S4] Length = 300 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 235/299 (78%), Positives = 273/299 (91%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSIL++K+TKVLVQGLTGK GTFHTEQA+ Y T++VGGIHP KG + WTG +P+F Sbjct: 1 MSILINKDTKVLVQGLTGKTGTFHTEQALAYYGTKMVGGIHPAKGGSNWTGSKGETLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE K+ T ANASVIYVPP+GA AIIE+IEAEIPLIVCITEGIPV DMV+VKARL+K Sbjct: 61 ASVAEGKDVTGANASVIYVPPAGAAAAIIEAIEAEIPLIVCITEGIPVADMVKVKARLDK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPG++TP+ CKIGIMPGSIFRKGSVG+LSRSGTLTYEAVFQTS EGLGQ++ Sbjct: 121 SKSRLIGPNCPGVMTPEECKIGIMPGSIFRKGSVGVLSRSGTLTYEAVFQTSNEGLGQTS 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFID+LE++LADEAT+SI+M+GEIGGSAEEEAAQFLKDEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDILEMYLADEATKSIIMIGEIGGSAEEEAAQFLKDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIEAMESAGIRVSPSPARLGKTLVEVLK 299 >gi|52425406|ref|YP_088543.1| SucD protein [Mannheimia succiniciproducens MBEL55E] gi|52307458|gb|AAU37958.1| SucD protein [Mannheimia succiniciproducens MBEL55E] Length = 289 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 176/298 (59%), Positives = 222/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K TKV+ QG TG GTFH+EQA+ Y T++VGG+ P KG + G +PVF Sbjct: 1 MAILINKETKVICQGFTGGQGTFHSEQALAY-GTKLVGGVSPGKGGSIHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A A+VIYVP DAI+E+I A + LIVCITEGIP LDM++VK +L++S Sbjct: 56 TVKEAVEQTGATATVIYVPAPFCKDAILEAIAAGLKLIVCITEGIPTLDMLQVKQKLDES 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPGI+ PD CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+ EG GQS Sbjct: 116 GVVMIGPNCPGIIVPDECKIGIMPGYIHKKGRVGIVSRSGTLTYEAVKQTTDEGFGQSAC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+L+ AD TE+IVM+GEIGGSAEEEAA+F+K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLYQADPKTEAIVMIGEIGGSAEEEAAEFIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A+DKI A++ AG+ S A IG +L +L Sbjct: 232 SYIAGITAPKGKRMGHAGAIISGGKGTADDKIAALQSAGVICVKSLADIGAALKTVLK 289 >gi|237749080|ref|ZP_04579560.1| succinyl-CoA synthetase subunit alpha [Oxalobacter formigenes OXCC13] gi|229380442|gb|EEO30533.1| succinyl-CoA synthetase subunit alpha [Oxalobacter formigenes OXCC13] Length = 292 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 165/300 (55%), Positives = 227/300 (75%), Gaps = 10/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++KN++V+VQGLTGK G FHTE ++ Y + VGG+ PKKG T + +N+PV Sbjct: 1 MSILINKNSRVIVQGLTGKTGAFHTEMSMNYAFGKECYVGGVTPKKGGTTF----LNLPV 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F V +A+E+T AN SVIYVPP A AI E++EA I ++CITEGIPV DM+R + +++ Sbjct: 57 FNNVKDAREQTGANVSVIYVPPPFAAAAIDEAVEAGIEFVICITEGIPVEDMLRTRYKMQ 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 ++ L+GPNCPGI+TPD KIGIMPG I +KGS+G++S+SGTLTYEA Q ++ GLGQS Sbjct: 117 GKNTILLGPNCPGIITPDELKIGIMPGHIHKKGSIGVVSKSGTLTYEAASQLAEFGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VG+GGDP+ G + IDVL++F D TE+++MVGEIGG+ EE AA+++K+ KP Sbjct: 177 TVVGVGGDPINGLKHIDVLKMFNDDPETEAVIMVGEIGGNDEETAAEWVKENM----TKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VGF+AG TAPPG+ MGHAGA+ISGGKG A++K++ M+E GI + +PA IG++L +L Sbjct: 233 VVGFIAGVTAPPGKRMGHAGAIISGGKGTAQEKLSVMEECGIKVTRNPAEIGKTLKSVLK 292 >gi|90421034|ref|ZP_01228937.1| succinyl-CoA synthetase, alpha subunit [Aurantimonas manganoxydans SI85-9A1] gi|90334669|gb|EAS48446.1| succinyl-CoA synthetase, alpha subunit [Aurantimonas manganoxydans SI85-9A1] Length = 303 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 222/302 (73%), Positives = 267/302 (88%), Gaps = 4/302 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN----VNV 56 MSILVDKNTKV+VQGLTGK G+FHTEQA+ Y TQ+VGG HPKKG W G + V + Sbjct: 1 MSILVDKNTKVIVQGLTGKTGSFHTEQALAYYGTQMVGGTHPKKGGEMWEGQSDGRTVQL 60 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 P+F++V EA+++T A ASVIYVPP+GA AI E+I+AEI LIVCITEGIPV DMVRVKA+ Sbjct: 61 PIFSSVVEARDKTGATASVIYVPPAGAAAAIEEAIDAEIGLIVCITEGIPVSDMVRVKAK 120 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L+K+ SRL+GPNCPG+LTP+ CKIGIMPG+IF+ G+VGI+SRSGTLTYEAVFQT+ EGLG Sbjct: 121 LDKTKSRLLGPNCPGVLTPEQCKIGIMPGNIFKTGNVGIVSRSGTLTYEAVFQTTNEGLG 180 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 Q+TAVGIGGDPVKGTEFID+LE+FLAD+ T+S++M+GEIGGSAEEEAAQFLKDEAK+GR Sbjct: 181 QTTAVGIGGDPVKGTEFIDMLEMFLADDETKSMIMIGEIGGSAEEEAAQFLKDEAKKGRS 240 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP VGF+AG+TAP GRTMGHAGAV+SGGKGGAEDKI AM+ AGI ++PSPA++G++LVEL Sbjct: 241 KPTVGFIAGRTAPKGRTMGHAGAVVSGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEL 300 Query: 297 LG 298 L Sbjct: 301 LK 302 >gi|168057210|ref|XP_001780609.1| predicted protein [Physcomitrella patens subsp. patens] gi|162667975|gb|EDQ54592.1| predicted protein [Physcomitrella patens subsp. patens] Length = 299 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 175/297 (58%), Positives = 227/297 (76%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK T+++VQG+TGK GTFHTEQAI Y TQVVGG+ P KG T G +PVF T Sbjct: 5 AVFVDKATRLIVQGITGKNGTFHTEQAIAY-GTQVVGGVTPNKGGTQHLG----LPVFNT 59 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+ ANA+VIYVPP A +AI+E+++AE+ L+VCITEGIP DM RVKA L +S Sbjct: 60 VAEAKQGVQANATVIYVPPKMACNAILEALDAELDLVVCITEGIPQQDMARVKAALLSQS 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT++ GLGQST Sbjct: 120 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTRVGLGQSTC 179 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT F+D L F+ D TE +V++GEIGGS EE+AA+F+ G +KP+V Sbjct: 180 IGIGGDPFSGTSFVDCLRCFVKDPQTEGVVLIGEIGGSGEEDAARFI---VSSGTQKPVV 236 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 FVAG TAPPGR MGHAGA+I+GG+G A+ K+ A++ AG+ + SPA +G++++++ Sbjct: 237 AFVAGLTAPPGRRMGHAGAIIAGGRGTAQAKMKALRAAGVTVVESPAHLGKTILKVF 293 >gi|88703458|ref|ZP_01101174.1| Succinyl-CoA synthetase alpha chain [Congregibacter litoralis KT71] gi|88702172|gb|EAQ99275.1| Succinyl-CoA synthetase alpha chain [Congregibacter litoralis KT71] Length = 290 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 170/298 (57%), Positives = 213/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSILINKDTKVICQGFTGSQGTFHSEQAIEY-GTKMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA T A ASVIYVP D+I+E+ I L+VCITEGIP LDM+ K + ++ Sbjct: 56 TVSEAVAATGAEASVIYVPAPFCKDSILEAANGGIKLVVCITEGIPTLDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QTS G GQST Sbjct: 116 GVRLVGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTSDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L +F AD ATE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILAMFEADPATEAIVMIGEIGGTAEEEAAAYIKANVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG L E+ G Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLADIGSGLSEITG 289 >gi|310641534|ref|YP_003946292.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Paenibacillus polymyxa SC2] gi|309246484|gb|ADO56051.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Paenibacillus polymyxa SC2] Length = 309 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 175/304 (57%), Positives = 229/304 (75%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSILVDK+TKV+ QG+TGK FH + A+ Y TQ+VGG P KG T G V Sbjct: 1 MSILVDKHTKVITQGITGKTALFHAKGALDY-GTQMVGGTSPGKGGTEVEITLENGQQVK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV+EAKE T A ASVIYVPP+ A D+I+E+++AE+ L++CITEGIPVLDM++VK Sbjct: 60 LPVFNTVSEAKEATGATASVIYVPPAFAADSILEAVDAELDLVICITEGIPVLDMIKVKR 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +E + LIGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAV Q + G+ Sbjct: 120 FMEGKKTVLIGPNCPGVITPGECKIGIMPGYIHLPGHVGVVSRSGTLTYEAVHQLTTRGI 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQS+AVGIGGDPVKG+EFID+L F D T +++M+GEIGG+AEEEAA++++D Sbjct: 180 GQSSAVGIGGDPVKGSEFIDILHRFNEDPNTHAVIMIGEIGGTAEEEAAEWIRDNM---- 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VGF+ G TAPPG+ MGHAGA+ISGGKG A++KI ++ GI +AP+P+ +G +LV Sbjct: 236 TKPVVGFIGGVTAPPGKRMGHAGAIISGGKGTAKEKIATLEACGIKVAPTPSEMGSTLVS 295 Query: 296 LLGS 299 +L + Sbjct: 296 VLEA 299 >gi|328775991|ref|XP_623800.2| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Apis mellifera] Length = 340 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 181/307 (58%), Positives = 230/307 (74%), Gaps = 13/307 (4%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +D NTKV+ QG TGK GTFH +QAI Y T++VGG++PKK T G PVF Sbjct: 34 NLKIDSNTKVICQGFTGKQGTFHCQQAIEY-GTKIVGGVNPKKAGTQHLGK----PVFKN 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE T A ASVIYVPP A AI+E+I+AE+PLIVCITEGIP DMV+VK RL E++ Sbjct: 89 VKEAKEATGATASVIYVPPPSAAAAIMEAIDAEMPLIVCITEGIPQHDMVKVKRRLLEQN 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 149 KSRLVGPNCPGIIAPEQCKIGIMPGHIHQKGKIGIVSRSGTLTYEAVNQTTLAGLGQTLC 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG------ 234 +GIGGDP GT FID L++FL D + I+M+GEIGGSAEE AA++L + G Sbjct: 209 IGIGGDPFNGTNFIDCLDVFLRDPECDGIIMIGEIGGSAEESAAEYLIEHNTVGCSSKLG 268 Query: 235 -RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 + KP+V F+AG TAPPGR MGHAGA+ISGGKGGA+DKINA+++AG+ ++ SPA++G L Sbjct: 269 NKTKPVVSFIAGITAPPGRRMGHAGAIISGGKGGAQDKINALEKAGVIVSRSPAQMGNEL 328 Query: 294 VELLGSL 300 ++ + L Sbjct: 329 LKEMTRL 335 >gi|262371938|ref|ZP_06065217.1| succinyl-CoA synthetase subunit alpha [Acinetobacter junii SH205] gi|262311963|gb|EEY93048.1| succinyl-CoA synthetase subunit alpha [Acinetobacter junii SH205] Length = 296 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 162/301 (53%), Positives = 223/301 (74%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T +++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSAQALDY-GTKVVGGVTPGKGGTTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ +A T A+ASVIYVP D+I+E++++ + LIV ITEG+P +DM++ K LE Sbjct: 56 TMKDAVRETGADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTIDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ID L+LF D T++I+M+GEIGG+AEEEAA+F++ KP Sbjct: 176 TCIGIGGDPIPGMNQIDALKLFQDDPDTDAIIMIGEIGGTAEEEAAEFIQSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGMAYTRSPAELGSTMMQVLK 291 Query: 299 S 299 Sbjct: 292 E 292 >gi|49483409|ref|YP_040633.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus MRSA252] gi|282903801|ref|ZP_06311689.1| succinyl-CoA synthase, alpha subunit [Staphylococcus aureus subsp. aureus C160] gi|282905564|ref|ZP_06313419.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus Btn1260] gi|282908539|ref|ZP_06316369.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910818|ref|ZP_06318621.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus WBG10049] gi|282918945|ref|ZP_06326680.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus C427] gi|283957989|ref|ZP_06375440.1| succinyl-CoA synthase, alpha subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|295427733|ref|ZP_06820365.1| succinyl-CoA ligase subunit alpha [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591309|ref|ZP_06949947.1| succinate--CoA ligase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus MN8] gi|81651268|sp|Q6GHI9|SUCD_STAAR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|49241538|emb|CAG40224.1| putative succinyl-CoA ligase [Staphylococcus aureus subsp. aureus MRSA252] gi|282316755|gb|EFB47129.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus C427] gi|282325423|gb|EFB55732.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus WBG10049] gi|282327601|gb|EFB57884.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330856|gb|EFB60370.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus Btn1260] gi|282595419|gb|EFC00383.1| succinyl-CoA synthase, alpha subunit [Staphylococcus aureus subsp. aureus C160] gi|283790138|gb|EFC28955.1| succinyl-CoA synthase, alpha subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|295128091|gb|EFG57725.1| succinyl-CoA ligase subunit alpha [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576195|gb|EFH94911.1| succinate--CoA ligase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus MN8] gi|312438376|gb|ADQ77447.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus TCH60] gi|315194135|gb|EFU24528.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus CGS00] Length = 302 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 168/296 (56%), Positives = 221/296 (74%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTKIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A SVIYVP A D+I+E+ +A++ +++CITE IPVLDMV+VK L+ Sbjct: 56 TVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIEA 287 >gi|73662829|ref|YP_301610.1| succinyl-CoA synthetase subunit alpha [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495344|dbj|BAE18665.1| succinyl-CoA synthetase alpha subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 301 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 171/296 (57%), Positives = 220/296 (74%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVIVQGITGSTALFHTKQMLEY-GTQIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA++ T A SVIYVP A DAI+E IEAE+ L +CITE IPV+DMV+VK E Sbjct: 56 TVEEAQKETGATVSVIYVPAPFAADAILECIEAELDLAICITEHIPVIDMVKVKRYSEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R++GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRIVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GFV G+TAPPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L++ Sbjct: 232 GFVGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTADTPSEIGTTLIDA 287 >gi|329898830|ref|ZP_08272492.1| Succinyl-CoA ligase [ADP-forming] alpha chain [gamma proteobacterium IMCC3088] gi|328920730|gb|EGG28199.1| Succinyl-CoA ligase [ADP-forming] alpha chain [gamma proteobacterium IMCC3088] Length = 290 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 214/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSILINSETKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A E T A ASVIYVP + D+I+E+ A I LIVCITEGIP LDM+ K + ++ Sbjct: 56 TVADAVEATGAEASVIYVPAAFCKDSILEAAFAGIKLIVCITEGIPTLDMLDAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D ATE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPATEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG A++K A+++AG+ S A IG +L E G Sbjct: 232 SYIAGVTAPKGKRMGHAGAIISGGKGTADEKFAALEDAGVTTVRSLADIGVALKERTG 289 >gi|294651210|ref|ZP_06728538.1| succinyl-CoA synthetase subunit alpha [Acinetobacter haemolyticus ATCC 19194] gi|292822863|gb|EFF81738.1| succinyl-CoA synthetase subunit alpha [Acinetobacter haemolyticus ATCC 19194] Length = 296 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 162/301 (53%), Positives = 222/301 (73%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T +++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSAQALDY-GTKVVGGVTPGKGGTTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA T A+ASVIYVP D+I+E++++ + LIV ITEG+P +DM++ K LE Sbjct: 56 TMKEAVRETQADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTIDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G I+ L+LF D T++I+M+GEIGG+AEEEAA+F+K KP Sbjct: 176 TCIGIGGDPIPGMNQIEALQLFQDDPDTDAIIMIGEIGGTAEEEAAEFIKSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGG+G AE+K A + AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGQGTAEEKFAAFERAGMAYTRSPAELGSTMMQVLK 291 Query: 299 S 299 Sbjct: 292 E 292 >gi|326437952|gb|EGD83522.1| succinyl-CoA ligase subunit alpha [Salpingoeca sp. ATCC 50818] Length = 322 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 226/299 (75%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L++K+TKV+ QG TG+ GTFH+E AI Y T++VGG+ PKK G +PVF + Sbjct: 27 NLLINKDTKVICQGFTGRQGTFHSEAAIEY-GTRMVGGVSPKKAGQEHLG----LPVFGS 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAK T A+A+V+YVPP GA A++E++EAE+PLIVCITEGIP DMVRVK L ++ Sbjct: 82 VEEAKRETNADATVVYVPPPGAAAAVLEAMEAEVPLIVCITEGIPQQDMVRVKHALLQQD 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P CKIGIMPG I G++G++SRSGTLTYEAV QT+ GLGQS Sbjct: 142 KSRLVGPNCPGIIKPGECKIGIMPGHIHTPGNIGVVSRSGTLTYEAVGQTTTVGLGQSLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID L++FL D T I+M+GEIGGSAEEEAA+FLK +KP+V Sbjct: 202 VGIGGDPFNGTDFIDCLDVFLKDPDTHGIIMIGEIGGSAEEEAAEFLKQNNSGPNRKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+ISGGKGGA +KI A+++AG+ +A SPA++G + + + Sbjct: 262 SFIAGLTAPPGRRMGHAGAIISGGKGGAAEKIAALEDAGVIVAKSPAQMGTLMKQAMED 320 >gi|226951553|ref|ZP_03822017.1| succinyl-CoA synthetase alpha chain [Acinetobacter sp. ATCC 27244] gi|226837695|gb|EEH70078.1| succinyl-CoA synthetase alpha chain [Acinetobacter sp. ATCC 27244] Length = 296 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 162/301 (53%), Positives = 222/301 (73%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T +++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSAQALDY-GTKVVGGVTPGKGGTTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA T A+ASVIYVP D+I+E++++ + LIV ITEG+P +DM++ K LE Sbjct: 56 TMKEAVRETQADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTIDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G I+ L+LF D T++I+M+GEIGG+AEEEAA+F+K KP Sbjct: 176 TCIGIGGDPIPGMNQIEALQLFQDDPDTDAIIMIGEIGGTAEEEAAEFIKSNVS----KP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGG+G AE+K A + AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGQGTAEEKFAAFERAGMAYTRSPAELGSTMMQVLK 291 Query: 299 S 299 Sbjct: 292 E 292 >gi|78221950|ref|YP_383697.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Geobacter metallireducens GS-15] gi|78193205|gb|ABB30972.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Geobacter metallireducens GS-15] Length = 291 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 167/299 (55%), Positives = 227/299 (75%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K++K++VQG+TG++G FHT+Q Y +++V G+ P KG + G +PVF Sbjct: 1 MSILINKDSKIVVQGITGRSGLFHTQQCRDY-GSRIVAGVTPGKGGIHIEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T AN S+I+VPP GA DAI+E+ +A + L VCITEGIPV DMV VK L+ S Sbjct: 56 TVEEAVRYTGANVSMIFVPPPGAADAILEAADAGVDLAVCITEGIPVRDMVPVKRILQGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CK+GIMPG I + G +G++SRSGTLTYEAV Q ++ GLGQST Sbjct: 116 KTRLVGPNCPGVITPGECKVGIMPGYIHKPGKIGVVSRSGTLTYEAVKQITEAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G +FIDVL+LF D+ TE++ M+GEIGGSAEE+AA+++++ KKP+ Sbjct: 176 VGIGGDPIIGMQFIDVLKLFNEDKQTEAVFMIGEIGGSAEEDAAEWIRENM----KKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPG+ MGHAGA+I+GGKG AEDKI + E G+ +APSP ++G +++E LG Sbjct: 232 AFIAGVTAPPGKRMGHAGAIITGGKGKAEDKIRTLGECGVVVAPSPTKMGAAMLEALGK 290 >gi|89256838|ref|YP_514200.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. holarctica LVS] gi|115315225|ref|YP_763948.1| succinate--CoA ligase (ADP-forming) [Francisella tularensis subsp. holarctica OSU18] gi|156503006|ref|YP_001429071.1| succinyl-CoA synthetase alpha chain [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009269|ref|ZP_02274200.1| succinyl-CoA synthetase alpha chain [Francisella tularensis subsp. holarctica FSC200] gi|254368117|ref|ZP_04984137.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. holarctica 257] gi|290954374|ref|ZP_06558995.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. holarctica URFT1] gi|295312195|ref|ZP_06802997.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. holarctica URFT1] gi|89144669|emb|CAJ79993.1| Succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. holarctica LVS] gi|115130124|gb|ABI83311.1| succinate--CoA ligase (ADP-forming) [Francisella tularensis subsp. holarctica OSU18] gi|134253927|gb|EBA53021.1| succinyl-CoA synthetase, alpha subunit [Francisella tularensis subsp. holarctica 257] gi|156253609|gb|ABU62115.1| succinyl-CoA synthetase alpha chain [Francisella tularensis subsp. holarctica FTNF002-00] Length = 290 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 217/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV KNTKVLVQG TGK GTFH+EQAI Y T +VGG+ P KG T N++ PVF Sbjct: 1 MSVLVYKNTKVLVQGFTGKNGTFHSEQAIAY-GTNIVGGVTPGKGGTT----NLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+AEA T A+ASVIYVP D+ IE+I++ + L+V ITEG+P LDM+ VK L+ Sbjct: 56 TMAEAVAATGADASVIYVPAPFVKDSAIEAIDSGVKLVVIITEGVPTLDMLVVKEYLKDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPGI+TP CKIGIMPG I KG VGI+SRSGTLTYEAV QT++ G GQST Sbjct: 116 DVRVIGPNCPGIITPGECKIGIMPGHIHMKGKVGIISRSGTLTYEAVAQTTKLGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G I+ L+L D TE+I+++GEIGG+AEEEAA+++K KP++ Sbjct: 176 IGIGGDPIPGMNQIEALKLLENDPQTEAIILIGEIGGTAEEEAAEYIKHNV----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAPPG+ MGHAGA+ISGGKG AE+K A + AGI SPA IG+ L E+ G Sbjct: 232 GYIAGVTAPPGKRMGHAGAIISGGKGTAEEKFAAFEAAGIAYTRSPAEIGKKLKEVTG 289 >gi|258545092|ref|ZP_05705326.1| succinyl-CoA synthetase subunit alpha [Cardiobacterium hominis ATCC 15826] gi|258519669|gb|EEV88528.1| succinyl-CoA synthetase subunit alpha [Cardiobacterium hominis ATCC 15826] Length = 290 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++KNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG +++ PVF Sbjct: 1 MSIYINKNTKVICQGFTGSQGTFHSEQAIAY-GTQLVGGVTPGKGGQ----SHLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 EA T ANAS+I+VPP+ A D+I+E+++A I +I CITEGIPVLDM++VK L + Sbjct: 56 NCHEAVAATGANASMIFVPPAFAADSILEAVDAGIEVIACITEGIPVLDMLKVKTALSGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + RLIGPNCPG++TP CK+GIMPG I + G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 NVRLIGPNCPGVITPGECKMGIMPGHIHQPGVVGIVSRSGTLTYEAVHQTTGIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F+DVL F AD T+ IVMVGEIGGSAEEEAA+++K KP+V Sbjct: 176 VGIGGDPINGTSFVDVLAAFQADPQTKGIVMVGEIGGSAEEEAAEYIKAHV----NKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAPPG+ MGHAGA+I+GGKG A DK A++ AG+ SPA IG +L +L+G+ Sbjct: 232 AYIAGVTAPPGKRMGHAGAIIAGGKGTAADKFRALEAAGVATVRSPADIGATLKQLMGA 290 >gi|322420764|ref|YP_004199987.1| succinyl-CoA synthetase subunit alpha [Geobacter sp. M18] gi|320127151|gb|ADW14711.1| succinyl-CoA synthetase, alpha subunit [Geobacter sp. M18] Length = 290 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 167/298 (56%), Positives = 218/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI+++K+T+V+ QG+TG G FH + A Y T++VGG+ P KG T G PVF Sbjct: 1 MSIMINKDTRVITQGITGATGLFHAQGAREY-GTRMVGGVTPGKGGTVVEG----FPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A ASVIYVPP A D+I+E+++A I L+ CITEGIPVLDMV+VK L Sbjct: 56 TVADAVQATGATASVIYVPPPFAADSIMEAVDAGIELVCCITEGIPVLDMVKVKQYLIGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I + G VG++SRSGTLTYEAV+Q + GLGQST Sbjct: 116 KTRLIGPNCPGVITPGQCKIGIMPGYIHKPGKVGVVSRSGTLTYEAVWQLTSIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L LF D TE+++M+GEIGGSAEEEAA+F+K KP+ Sbjct: 176 VGIGGDPVNGTSHIDCLRLFEQDPDTEAVIMIGEIGGSAEEEAARFVKAHM----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A +K+ ++E GI +A +PA + ++L+++ Sbjct: 232 AYIAGVTAPPGKRMGHAGAIISGGKGTATEKVAVLRECGISVAATPAEMAQALLKVYK 289 >gi|242008595|ref|XP_002425088.1| succinyl-CoA ligase subunit alpha , putative [Pediculus humanus corporis] gi|212508753|gb|EEB12350.1| succinyl-CoA ligase subunit alpha , putative [Pediculus humanus corporis] Length = 329 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 177/300 (59%), Positives = 222/300 (74%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+ QG TGK GTFH+ QA+ Y TQ+VGG+ P KG PVF + Sbjct: 32 NLKINKDTKVICQGFTGKQGTFHSVQALEY-GTQIVGGVSPGKGGKTHLEK----PVFNS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA-RLEKS 120 V EA + T A ASVIYVPP GA AI+ESIEAE+PLIVCITEGIP DMV+VK L ++ Sbjct: 87 VKEAMQATGATASVIYVPPPGAAKAILESIEAEMPLIVCITEGIPQSDMVKVKHQLLRQN 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ D CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+Q GLGQ+ Sbjct: 147 KSRLIGPNCPGIIASDECKIGIMPGHIHKKGCVGIVSRSGTLTYEAVHQTTQVGLGQTLC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE F+ D T+ I+++GEIGG AEE+AA++L + KP+V Sbjct: 207 VGIGGDPFNGTDFIDCLECFIKDPDTKGIILIGEIGGVAEEQAAEYLTKHNYGIKAKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA+DKI A++ AG+ + SPA++G L + + L Sbjct: 267 SFIAGLSAPPGRRMGHAGAIISGGKGGAQDKIKALESAGVIVTKSPAKMGSELFKEMKRL 326 >gi|325186353|emb|CCA20859.1| unnamed protein product [Albugo laibachii Nc14] Length = 325 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 176/298 (59%), Positives = 219/298 (73%), Gaps = 8/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + ++++T+V+ QG TGK GTFH+EQAI Y T++VGG+ PKKG + G +PVF +V Sbjct: 28 VWINEDTRVICQGFTGKQGTFHSEQAIAY-GTKMVGGVTPKKGGSTHLG----LPVFNSV 82 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 +EAK T A+ASVIYVPP AII++IEAEIPL+V ITEGIP DMV+VK L + Sbjct: 83 SEAKRATNADASVIYVPPPFCAQAIIDAIEAEIPLVVAITEGIPQQDMVKVKWHLRQQKV 142 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CK+GIMPG I KG +GI+SRSGTLTYEAV QT+ GLGQST + Sbjct: 143 TRLIGPNCPGIIKPGECKMGIMPGYIHLKGKIGIVSRSGTLTYEAVAQTTSTGLGQSTVI 202 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE F D TE I+M+GEIGGSAEEEAA +L+ R KP+V Sbjct: 203 GIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAADWLQQY--GDRNKPVVS 260 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA++SGGKG AE K A++ AG+ + SPAR+G + EL+ Sbjct: 261 FIAGTTAPPGRRMGHAGAIVSGGKGTAEGKFKALEAAGVAVTRSPARLGELMAELMKD 318 >gi|15924236|ref|NP_371770.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus Mu50] gi|15926829|ref|NP_374362.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus N315] gi|57651815|ref|YP_186121.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus COL] gi|82750849|ref|YP_416590.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus RF122] gi|87161332|ref|YP_493836.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194954|ref|YP_499754.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148267737|ref|YP_001246680.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus JH9] gi|150393795|ref|YP_001316470.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus JH1] gi|151221368|ref|YP_001332190.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus str. Newman] gi|156979567|ref|YP_001441826.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus Mu3] gi|161509412|ref|YP_001575071.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253315604|ref|ZP_04838817.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006033|ref|ZP_05144634.2| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795698|ref|ZP_05644677.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9781] gi|258415922|ref|ZP_05682192.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9763] gi|258421684|ref|ZP_05684608.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9719] gi|258423913|ref|ZP_05686798.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9635] gi|258444584|ref|ZP_05692913.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A8115] gi|258447583|ref|ZP_05695727.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A6300] gi|258449425|ref|ZP_05697528.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A6224] gi|258452545|ref|ZP_05700551.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A5948] gi|258454804|ref|ZP_05702768.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A5937] gi|262048144|ref|ZP_06021031.1| succinyl-CoA synthetase alpha subunit [Staphylococcus aureus D30] gi|262051309|ref|ZP_06023532.1| succinyl-CoA synthetase alpha subunit [Staphylococcus aureus 930918-3] gi|269202862|ref|YP_003282131.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus ED98] gi|282892734|ref|ZP_06300969.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus A8117] gi|282920030|ref|ZP_06327759.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus A9765] gi|282927588|ref|ZP_06335204.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus A10102] gi|284024239|ref|ZP_06378637.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus 132] gi|294848241|ref|ZP_06788988.1| succinyl-CoA ligase subunit alpha [Staphylococcus aureus A9754] gi|295406181|ref|ZP_06815988.1| succinyl-CoA ligase subunit alpha [Staphylococcus aureus A8819] gi|296274803|ref|ZP_06857310.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus MR1] gi|297244409|ref|ZP_06928292.1| succinyl-CoA ligase subunit alpha [Staphylococcus aureus A8796] gi|54039646|sp|P99070|SUCD_STAAN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|54042230|sp|P66866|SUCD_STAAM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|81694646|sp|Q5HGI6|SUCD_STAAC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|13701046|dbj|BAB42341.1| succinyl-CoA synthetase [Staphylococcus aureus subsp. aureus N315] gi|14247016|dbj|BAB57408.1| succinyl-CoA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|57286001|gb|AAW38095.1| succinyl-CoA synthase, alpha subunit [Staphylococcus aureus subsp. aureus COL] gi|82656380|emb|CAI80799.1| succinyl-CoA synthetase alpha chain [Staphylococcus aureus RF122] gi|87127306|gb|ABD21820.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202512|gb|ABD30322.1| succinyl-CoA synthetase, alpha subunit, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740806|gb|ABQ49104.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus JH9] gi|149946247|gb|ABR52183.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus aureus subsp. aureus JH1] gi|150374168|dbj|BAF67428.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus aureus subsp. aureus str. Newman] gi|156721702|dbj|BAF78119.1| succinyl-CoA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|160368221|gb|ABX29192.1| succinate--CoA ligase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257789670|gb|EEV28010.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9781] gi|257839258|gb|EEV63732.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9763] gi|257842370|gb|EEV66795.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9719] gi|257845942|gb|EEV69971.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9635] gi|257850077|gb|EEV74030.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A8115] gi|257853774|gb|EEV76733.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A6300] gi|257857413|gb|EEV80311.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A6224] gi|257859763|gb|EEV82605.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A5948] gi|257863187|gb|EEV85951.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A5937] gi|259160684|gb|EEW45705.1| succinyl-CoA synthetase alpha subunit [Staphylococcus aureus 930918-3] gi|259163710|gb|EEW48265.1| succinyl-CoA synthetase alpha subunit [Staphylococcus aureus D30] gi|262075152|gb|ACY11125.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus ED98] gi|282590591|gb|EFB95668.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus A10102] gi|282594746|gb|EFB99730.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus A9765] gi|282764731|gb|EFC04856.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus A8117] gi|285816928|gb|ADC37415.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Staphylococcus aureus 04-02981] gi|294825041|gb|EFG41463.1| succinyl-CoA ligase subunit alpha [Staphylococcus aureus A9754] gi|294968769|gb|EFG44791.1| succinyl-CoA ligase subunit alpha [Staphylococcus aureus A8819] gi|297178439|gb|EFH37685.1| succinyl-CoA ligase subunit alpha [Staphylococcus aureus A8796] gi|298694539|gb|ADI97761.1| succinyl-CoA synthetase alpha chain [Staphylococcus aureus subsp. aureus ED133] gi|312829640|emb|CBX34482.1| succinyl-CoA ligase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315131040|gb|EFT87024.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus CGS03] gi|315198486|gb|EFU28815.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus CGS01] gi|320140938|gb|EFW32785.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus MRSA131] gi|320144347|gb|EFW36113.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus MRSA177] gi|323441024|gb|EGA98731.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus O11] gi|323443892|gb|EGB01503.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus O46] gi|329727104|gb|EGG63560.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus aureus subsp. aureus 21172] gi|329727821|gb|EGG64272.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus aureus subsp. aureus 21189] gi|329733612|gb|EGG69940.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus aureus subsp. aureus 21193] Length = 302 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 168/296 (56%), Positives = 221/296 (74%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTKIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A SVIYVP A D+I+E+ +A++ +++CITE IPVLDMV+VK L+ Sbjct: 56 TVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIEA 287 >gi|158319673|ref|YP_001512180.1| succinyl-CoA synthetase subunit alpha [Alkaliphilus oremlandii OhILAs] gi|158139872|gb|ABW18184.1| succinyl-CoA synthetase, alpha subunit [Alkaliphilus oremlandii OhILAs] Length = 300 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 166/299 (55%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K+T+V+VQG+TGK +HT+Q I Y T++V G+ P K + NVPVF Sbjct: 1 MSIWINKDTRVIVQGITGKTALYHTKQMIEY-GTKIVAGVTPGKEGSTIE----NVPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T AN SVIYVP A DAI+E+++AE+ +++CITE IP+ DM+ VK LE Sbjct: 56 TVQKAVRETGANVSVIYVPAKSAADAILEAVDAELEMVICITEHIPIKDMIFVKKHLEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TP+ CKIGIMPG I +KG +G++SRSGTLTYEAV Q S+ G+GQSTA Sbjct: 116 KTRLIGPNCPGIITPEECKIGIMPGYIHKKGRIGVVSRSGTLTYEAVHQLSERGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FIDVL F D T++++M+GEIGG+AEE+AA ++K+ KKP+V Sbjct: 176 VGIGGDPVNGTDFIDVLMEFNEDSETDAVIMIGEIGGNAEEKAALWIKENM----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF++GKTAP G+ MGHAGA+IS GKG A++KI M+ GI +A +P IG ++V++L Sbjct: 232 GFISGKTAPAGKRMGHAGAIISEGKGTADEKIRVMESCGIHMAQNPTDIGATMVKVLKD 290 >gi|108762192|ref|YP_631735.1| succinyl-CoA synthetase subunit alpha [Myxococcus xanthus DK 1622] gi|108466072|gb|ABF91257.1| succinyl-CoA synthetase, alpha subunit [Myxococcus xanthus DK 1622] Length = 299 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 175/301 (58%), Positives = 226/301 (75%), Gaps = 10/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV++NTKVL QG+TG AG+FH +Q + Y T++V G+ P KG T + G VPVF Sbjct: 1 MAILVNENTKVLCQGITGSAGSFHAKQMLEY-GTKLVAGVTPGKGGTTFEGK---VPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TVAEA + T AN SV++VPP A D+I+E+ +A + LI+ ITEGIPV DMVR K L+ K Sbjct: 57 TVAEAVKETGANTSVVFVPPPFAADSIMEAADAGVALIIVITEGIPVNDMVRAKRYLQGK 116 Query: 120 SSSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RL+GPNCPG++TP + CKIGIMPG I + G +G++SRSGTLTYEAV Q +Q GLGQS Sbjct: 117 PGIRLVGPNCPGVITPGALCKIGIMPGHIHKPGRIGVVSRSGTLTYEAVHQLTQLGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV GT+F+DVL+LF AD T++++M+GEIGG AEE A+++ R KP Sbjct: 177 TAVGIGGDPVNGTDFVDVLKLFNADPDTDAVIMIGEIGGDAEERGAEYV----AREFTKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I GF+AG++APPG+ MGHAGA+ISGGKG A +KI AM+ AGI +A SPA +G +L E L Sbjct: 233 IAGFIAGQSAPPGKRMGHAGAIISGGKGTATEKIKAMEAAGILMAASPAELGTTLQEALK 292 Query: 299 S 299 Sbjct: 293 R 293 >gi|261868410|ref|YP_003256332.1| hypothetical protein D11S_1750 [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413742|gb|ACX83113.1| hypothetical protein D11S_1750 [Aggregatibacter actinomycetemcomitans D11S-1] Length = 290 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 173/299 (57%), Positives = 217/299 (72%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NTKV+ QG TG GTFH++QA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDNNTKVICQGFTGGQGTFHSQQALAY-GTKLVGGVSPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T A A+VIYVP G DAI+E+I+A I LIVCITEGIP LDM+ VK RL ++ Sbjct: 56 TVRDAVEATGATATVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMLVVKQRLNQT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGVITPEECKIGIMPGDIHKKGKIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ + F+D+L+LF D TE+IVM+GEIGGSAEEEAA F+K KP+V Sbjct: 176 VGIGGDPIPCSNFVDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAFIKQHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP + MGHAGA+ISGGKG A+ K A++ AG+ S IG L ++L Sbjct: 232 SYIAGVTAPKDKRMGHAGAIISGGKGTADAKFVALEAAGVKTVRSLVGIGAVLRDVLKK 290 >gi|218692341|ref|YP_002400553.1| Succinyl-CoA synthetase subunit alpha (SCS-alpha) [Escherichia coli ED1a] gi|218429905|emb|CAR10879.2| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Escherichia coli ED1a] Length = 290 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 169/299 (56%), Positives = 220/299 (73%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+VLVQG+TGK GTFHTEQAI Y TQ+VGG+ P KG ++ PVF Sbjct: 1 MSVLINKHTRVLVQGITGKNGTFHTEQAIAY-GTQIVGGVTPGKGGQRH----LDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 ++ EA +T A+ASVIYVP D+++E+IEA + L+V ITEG+P LDMV+V+ L+ Sbjct: 56 SMKEAMRQTEADASVIYVPAPFVLDSVVEAIEAGVKLVVVITEGVPTLDMVKVRRLLDCH 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++TP CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PDVRLIGPNCPGVITPGECKIGIMPGEIHRPGRIGIVSRSGTLTYEAVAQTTALGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FID L LF D T++++M+GEIGG+AEE AA+F++DE KP+ Sbjct: 176 CIGIGGDPVPGTNFIDALRLFENDPQTDAVIMIGEIGGNAEERAAEFIRDEM----NKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VG++AG TAP G+ MGHAGA+ISGG G AEDK A +AG+ +PA +G +L ++ Sbjct: 232 VGYIAGVTAPKGKRMGHAGAIISGGSGSAEDKFRAFDKAGMAWTRNPALLGETLWNVIK 290 >gi|260752925|ref|YP_003225818.1| succinyl-CoA synthetase, subunit alpha [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552288|gb|ACV75234.1| succinyl-CoA synthetase, alpha subunit [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 294 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 191/299 (63%), Positives = 244/299 (81%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL + TKV+ QG+TG+ G+ HT Q++ Y T++VGG+ P KG +++P+F Sbjct: 1 MSILANATTKVITQGITGQQGSHHTAQSLAY-GTKMVGGVTPGKGGQTH----LDLPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEAK++T A+AS+I+VPP+ AGDAI+E+I+AEIPLIV +TEGIP+LDMVRVK L S Sbjct: 56 SVAEAKQKTGADASMIFVPPAFAGDAILEAIDAEIPLIVTVTEGIPILDMVRVKRALTGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPN PG+LTPDS +IGIMPG+IF+KGSVGI+SRSGTLTYEAVFQTSQ GLGQSTA Sbjct: 116 KSRLIGPNSPGLLTPDSARIGIMPGAIFKKGSVGIVSRSGTLTYEAVFQTSQLGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID+L++FL D+ TESI+M+GEIGGS EE AA+FLK++A++GRKKP+ Sbjct: 176 VGIGGDPVNGTNFIDILDMFLDDDETESIIMIGEIGGSDEENAAEFLKEQARKGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG +APPGR MGHAGA++SG G A KI AM+ AGI + P P++IG +L+ LL Sbjct: 236 GFIAGVSAPPGRHMGHAGAIVSGHSGSASAKIEAMQSAGIAMTPDPSKIGHTLLNLLKK 294 >gi|299536762|ref|ZP_07050070.1| succinyl-CoA synthetase subunit alpha [Lysinibacillus fusiformis ZC1] gi|298727774|gb|EFI68341.1| succinyl-CoA synthetase subunit alpha [Lysinibacillus fusiformis ZC1] Length = 300 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 172/299 (57%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++ ++K+TKV+VQG+TG+ FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MAVFINKDTKVIVQGITGETALFHTKQMLEY-GTKIVAGVTPGKGGLEIEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A SVIYVP A DAI+E+++AE+ L +CITE IPVLDMV+VK +E Sbjct: 56 TVAEAVAATGATTSVIYVPAPFAADAILEAVDAELELTICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RL+GPNCPG++T D CKIGIMPG I KG VG++SRSGTLTYEAV Q +Q G+GQ+TA Sbjct: 116 NTRLVGPNCPGVITADECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLTQAGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLE F D T ++VM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLEAFNNDPETYAVVMIGEIGGTAEEEAAAWIKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI AM EAGI +A +P+ IG +L++++ Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKAMNEAGIEVAETPSVIGETLIKVIKE 290 >gi|327441067|dbj|BAK17432.1| succinyl-CoA synthetase, alpha subunit [Solibacillus silvestris StLB046] Length = 300 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 170/299 (56%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ ++K TKV+VQG+TG+ FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MSVFINKETKVIVQGITGETALFHTKQMLEY-GTKIVAGVTPGKGGLEIEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T AN SVIYVP A DAIIE+++A++ + +CITE IPVLDMV+VK +E Sbjct: 56 TVQEAVDATGANVSVIYVPAPFAADAIIEAVDADLDMAICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I KG VG++SRSGTLTYEAV Q SQ G+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLSQAGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID L+ F D T ++VM+GEIGG+AEEEAA+++++ KP+V Sbjct: 176 VGIGGDPVNGTNFIDCLKAFNEDPETYAVVMIGEIGGTAEEEAAEWIQENM----NKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI AM AGI +AP+P+ IG +L++++ Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKAMNAAGIEVAPTPSVIGETLIKVIKE 290 >gi|196015167|ref|XP_002117441.1| hypothetical protein TRIADDRAFT_61514 [Trichoplax adhaerens] gi|190579970|gb|EDV20057.1| hypothetical protein TRIADDRAFT_61514 [Trichoplax adhaerens] Length = 327 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 174/299 (58%), Positives = 217/299 (72%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I++ K T+V+ QG TG+ GTFH+EQAI Y T +VGG+ P KG G +PVF + Sbjct: 30 NIMIGKETRVICQGFTGRQGTFHSEQAIAY-GTNMVGGVSPGKGGKTHLG----LPVFNS 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR-LEKS 120 V EA + T A A+VIYVPP GA AI E+++A I LIVCITEGIP DMV+VK + L + Sbjct: 85 VQEAVDSTGAEATVIYVPPQGAAAAIHEAVDAGIGLIVCITEGIPQQDMVKVKHKILRQD 144 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P CKIGIMP I G +GI+SRSGTLTYEAVFQT+ GLGQ+ Sbjct: 145 KSRLIGPNCPGIIRPGHCKIGIMPAHIHLPGRIGIVSRSGTLTYEAVFQTTNVGLGQTLC 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID L++FL D+ TE IV++GEIGG AEE+AA+FL KP+V Sbjct: 205 VGIGGDPFNGTDFIDCLDIFLKDDKTEGIVLIGEIGGEAEEKAAEFLAKHNSGPNAKPVV 264 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+ISGGKGGAE+KI ++ AG+ + SPARIG ++ E + Sbjct: 265 SFIAGITAPPGRRMGHAGAIISGGKGGAEEKIATLEGAGVVVTKSPARIGSTIKEAMQK 323 >gi|21282858|ref|NP_645946.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus MW2] gi|49486085|ref|YP_043306.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus MSSA476] gi|253731865|ref|ZP_04866030.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733516|ref|ZP_04867681.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus TCH130] gi|282916496|ref|ZP_06324258.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus D139] gi|297208108|ref|ZP_06924539.1| succinate--CoA ligase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300912189|ref|ZP_07129632.1| succinate--CoA ligase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus TCH70] gi|38605353|sp|Q8NX01|SUCD_STAAW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|81649421|sp|Q6G9W7|SUCD_STAAS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|21204297|dbj|BAB94994.1| succinyl-CoA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|49244528|emb|CAG42957.1| putative succinyl-CoA ligase [Staphylococcus aureus subsp. aureus MSSA476] gi|253724275|gb|EES93004.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728570|gb|EES97299.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus TCH130] gi|282319936|gb|EFB50284.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus D139] gi|296887351|gb|EFH26253.1| succinate--CoA ligase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886435|gb|EFK81637.1| succinate--CoA ligase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus TCH70] Length = 302 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 168/296 (56%), Positives = 221/296 (74%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTKIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A SVIYVP A D+I+E+ +A++ +++CITE IPVLDMV+VK L+ Sbjct: 56 TVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIEA 287 >gi|257425300|ref|ZP_05601725.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus 55/2053] gi|257427960|ref|ZP_05604358.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus 65-1322] gi|257430593|ref|ZP_05606975.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus 68-397] gi|257433354|ref|ZP_05609712.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus E1410] gi|257436196|ref|ZP_05612243.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus M876] gi|282914023|ref|ZP_06321810.1| succinyl-CoA synthase, alpha subunit [Staphylococcus aureus subsp. aureus M899] gi|282924068|ref|ZP_06331744.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus C101] gi|293501054|ref|ZP_06666905.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus 58-424] gi|293510016|ref|ZP_06668724.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus M809] gi|293526603|ref|ZP_06671288.1| succinyl-CoA synthase, alpha subunit [Staphylococcus aureus subsp. aureus M1015] gi|257271757|gb|EEV03895.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus 55/2053] gi|257274801|gb|EEV06288.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus 65-1322] gi|257278721|gb|EEV09340.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus 68-397] gi|257281447|gb|EEV11584.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus E1410] gi|257284478|gb|EEV14598.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus M876] gi|282314040|gb|EFB44432.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus C101] gi|282322091|gb|EFB52415.1| succinyl-CoA synthase, alpha subunit [Staphylococcus aureus subsp. aureus M899] gi|290920675|gb|EFD97738.1| succinyl-CoA synthase, alpha subunit [Staphylococcus aureus subsp. aureus M1015] gi|291096059|gb|EFE26320.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus 58-424] gi|291466960|gb|EFF09478.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus M809] Length = 302 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 169/296 (57%), Positives = 221/296 (74%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTKIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A SVIYVP A D+I+ES +A++ +++CITE IPVLDMV+VK L+ Sbjct: 56 TVEEAKNETGATVSVIYVPAPFAADSILESADADLDMVICITEHIPVLDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIEA 287 >gi|221142036|ref|ZP_03566529.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus str. JKD6009] gi|304381190|ref|ZP_07363843.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|269940738|emb|CBI49119.1| putative succinyl-CoA ligase [Staphylococcus aureus subsp. aureus TW20] gi|302751069|gb|ADL65246.1| succinate--CoA ligase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340173|gb|EFM06114.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|329313915|gb|AEB88328.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus T0131] Length = 302 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 168/296 (56%), Positives = 220/296 (74%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTKIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A SVIYVP A D+I+E+ +A++ +++CITE IPVLDMV+VK L+ Sbjct: 56 TVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHEKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIEA 287 >gi|90416061|ref|ZP_01223994.1| succinyl-CoA synthetase alpha chain [marine gamma proteobacterium HTCC2207] gi|90332435|gb|EAS47632.1| succinyl-CoA synthetase alpha chain [marine gamma proteobacterium HTCC2207] Length = 290 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 169/298 (56%), Positives = 213/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++++TKV+ QG TG GTFH+EQA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILINRDTKVICQGFTGGQGTFHSEQALEY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E T A ASVIYVP + D+I+E+ A + L+VCITEGIP DM+ K + Sbjct: 56 TVAEAVETTGAEASVIYVPAAFCKDSILEAANAGLKLVVCITEGIPTQDMLDCKVVCDTL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDYGYGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L LF D ATE+IVM+GEIGG+AEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSSFIDILALFEKDPATEAIVMIGEIGGTAEEEAAAYIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA++SGGKG A++K A+++AG+ S A IG L E+ G Sbjct: 232 SYIAGVTAPAGKRMGHAGAIVSGGKGTADEKFAALEDAGVKTVRSLADIGAGLKEITG 289 >gi|182680504|ref|YP_001834650.1| succinyl-CoA synthetase, alpha subunit [Beijerinckia indica subsp. indica ATCC 9039] gi|182636387|gb|ACB97161.1| succinyl-CoA synthetase, alpha subunit [Beijerinckia indica subsp. indica ATCC 9039] Length = 294 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 206/296 (69%), Positives = 247/296 (83%), Gaps = 5/296 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DK T V+ QG TG+ GTFH+EQA+ + T+++GG+ P KG G +PVF Sbjct: 1 MAILIDKETGVICQGFTGRNGTFHSEQALAF-GTRMLGGVAPGKGGRTHLG----LPVFE 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +AK+ T ASVIYVPP GA DAI+E+I+AEIPLI+CITEGIPVLDMV+VK L S Sbjct: 56 TVLQAKQATGCEASVIYVPPPGAADAILEAIDAEIPLIICITEGIPVLDMVKVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+T + KIGIMP +IF GSVGI+SRSGTLTYEAVFQT++EGLGQ+TA Sbjct: 116 KSRLIGPNCPGIVTAGASKIGIMPANIFSVGSVGIVSRSGTLTYEAVFQTTREGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKG++FID+LELFLADE T SIVM+GEIGGS EE+AAQFL DEA+RGRKKP+V Sbjct: 176 VGIGGDPVKGSDFIDILELFLADEKTHSIVMIGEIGGSGEEDAAQFLADEARRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+AG+TAPPGR MGHAGA+ISGGKG AEDK+ AM+ AGI ++PSPARIG +L EL Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGAAEDKVAAMEAAGIKVSPSPARIGHTLAEL 291 >gi|157114411|ref|XP_001652258.1| succinyl-CoA synthetase small subunit, putative [Aedes aegypti] gi|157114413|ref|XP_001652259.1| succinyl-CoA synthetase small subunit, putative [Aedes aegypti] gi|157114415|ref|XP_001652260.1| succinyl-CoA synthetase small subunit, putative [Aedes aegypti] gi|94468890|gb|ABF18294.1| succinyl-CoA synthetase alpha subunit [Aedes aegypti] gi|108877302|gb|EAT41527.1| succinyl-CoA synthetase small subunit, putative [Aedes aegypti] gi|108877303|gb|EAT41528.1| succinyl-CoA synthetase small subunit, putative [Aedes aegypti] gi|108877304|gb|EAT41529.1| succinyl-CoA synthetase small subunit, putative [Aedes aegypti] Length = 327 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 171/300 (57%), Positives = 232/300 (77%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ N+KV+ QG TGK GTFH++QA+ Y T++VGG+ P KG ++N+PVF + Sbjct: 30 NLKLNSNSKVICQGFTGKQGTFHSQQALEY-GTKLVGGVSPGKGGR----QHLNLPVFNS 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAK T A+A+VIYVPP GA +AI+E+IEAEIPL+VCITEG+P DMV+VK L + Sbjct: 85 VKEAKAATGADATVIYVPPPGAANAIMEAIEAEIPLVVCITEGVPQHDMVKVKHALLAQD 144 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 145 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 205 VGIGGDPFNGTDFIDCLEVFLKDPDTKGIILIGEIGGVAEEKAADYLMQYNQGIKAKPVV 264 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA+DKINA+++AG+ + SPA++G+ L + + L Sbjct: 265 SFIAGLSAPPGRRMGHAGAIISGGKGGAQDKINALEKAGVIVTRSPAQMGKELFKEMKRL 324 >gi|251797455|ref|YP_003012186.1| succinyl-CoA synthetase, subunit alpha [Paenibacillus sp. JDR-2] gi|247545081|gb|ACT02100.1| succinyl-CoA synthetase, alpha subunit [Paenibacillus sp. JDR-2] Length = 313 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 175/304 (57%), Positives = 227/304 (74%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSILV+K+TKV+ QG+TG G FH + A+ Y TQ+VGG+ P KG T G V+ Sbjct: 1 MSILVNKDTKVITQGITGATGLFHAKGALDY-GTQMVGGVTPGKGGTNVDITLENGNVVS 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV +A T A ASVIYVPP+ A D+I+E+++A + L++CITEGIPVLDMV+VK Sbjct: 60 LPVFNTVEQAVAATGATASVIYVPPAFAADSIMEAVDAGLDLVICITEGIPVLDMVKVKR 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +E S + LIGPNCPG++TP CKIGIMPG I KG VG++SRSGTLTYEAV Q S G+ Sbjct: 120 YMEGSKTTLIGPNCPGVITPGECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLSTRGI 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQS+AVGIGGDPVKG+EFID+L F D T +++M+GEIGG+AEEEAA+++K Sbjct: 180 GQSSAVGIGGDPVKGSEFIDILSRFNEDPDTYAVIMIGEIGGTAEEEAAEWIKANM---- 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+ G TAPPG+ MGHAGA+ISGGKG A +KI ++ GI +AP+P+ +G +LV Sbjct: 236 KKPVVGFIGGATAPPGKRMGHAGAIISGGKGTAAEKIATLEACGIKVAPTPSDMGSTLVS 295 Query: 296 LLGS 299 +L Sbjct: 296 VLEE 299 >gi|304404234|ref|ZP_07385896.1| succinyl-CoA synthetase, alpha subunit [Paenibacillus curdlanolyticus YK9] gi|304347212|gb|EFM13044.1| succinyl-CoA synthetase, alpha subunit [Paenibacillus curdlanolyticus YK9] Length = 310 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 174/304 (57%), Positives = 227/304 (74%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSIL++K+TKV+ QG+TGK FH + A+ Y TQ+VGG P KG T G + Sbjct: 1 MSILINKDTKVITQGITGKTALFHAKGALDY-GTQMVGGTSPGKGGTTVEIALENGSTAS 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV EA T A ASVIYVPP+ A DAI+E+++AE+ +++CITEGIPVLDMV+V+ Sbjct: 60 LPVFNTVTEAVAATGATASVIYVPPAFAADAILEAVDAELEIVICITEGIPVLDMVKVQR 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 LE +RLIGPNCPG++TPD CKIGIMPG I KG VG++SRSGTLTYEAV Q + G+ Sbjct: 120 YLEGKKTRLIGPNCPGLITPDECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLTTRGI 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQS+AVGIGGDPVKGTEFIDVL +F D T +++M+GEIGG+AEEEAA+++K Sbjct: 180 GQSSAVGIGGDPVKGTEFIDVLNMFNEDPDTYAVIMIGEIGGTAEEEAAEWIKANM---- 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+ G TAP G+ MGHAGA+ISGGKG A +KI ++ G+ ++P+P+ +G +LV Sbjct: 236 KKPVVGFIGGATAPEGKRMGHAGAIISGGKGTAAEKIATLEACGVKVSPTPSEMGSTLVS 295 Query: 296 LLGS 299 +L Sbjct: 296 VLEE 299 >gi|293610892|ref|ZP_06693191.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826544|gb|EFF84910.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 296 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 162/301 (53%), Positives = 223/301 (74%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T +++PVF Sbjct: 1 MSVLINKDTKVLVQGFTGKNGTFHSAQALDY-GTKVVGGVTPGKGGTTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 T+ EA T A+ASVIYVP D+I+E++++ + LIV ITEG+P +DM++ K LE Sbjct: 56 TMKEAVGETNADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTIDMLKAKRYLETN 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 GNGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G I+ L+LF D T++I+M+GEIGG+AEEEAA+F+K KP Sbjct: 176 TCIGIGGDPIPGMNQIEALQLFQDDPDTDAIIMIGEIGGTAEEEAAEFIKSNV----TKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAP G+ MGHAGA+ISGG+G AE+K A ++AG+ SPA +G +++++L Sbjct: 232 VVGYIAGVTAPKGKRMGHAGAIISGGQGTAEEKFAAFEKAGMAYTRSPAELGSTMLQVLK 291 Query: 299 S 299 Sbjct: 292 E 292 >gi|146328935|ref|YP_001210179.1| succinyl-CoA synthetase, alpha subunit [Dichelobacter nodosus VCS1703A] gi|146232405|gb|ABQ13383.1| succinyl-CoA synthetase, alpha subunit [Dichelobacter nodosus VCS1703A] Length = 290 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 180/299 (60%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI VDKNT+V+ QG TG GTFH+EQAI Y TQ++GG+ P KG ++ PVF Sbjct: 1 MSIYVDKNTRVITQGFTGSQGTFHSEQAIAY-GTQLLGGVTPNKGGETH----LDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 EA T ANAS+I+VPP A DAI+E+I+A I I CITEGIPVLDM++VKA L+ + Sbjct: 56 NCYEAVCATKANASMIFVPPPFAADAILEAIDAGIETIACITEGIPVLDMLKVKAALKGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + RLIGPNCPGI+TPD CK+GIMP I +KGS+GI+SRSGTLTYEAV QT+Q G GQST Sbjct: 116 NVRLIGPNCPGIITPDECKMGIMPAHIHQKGSIGIVSRSGTLTYEAVHQTTQSGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVL F DE T +IVM+GEIGGSAEEEAA+F+K KKP+V Sbjct: 176 VGIGGDPICGTRFIDVLSAFEQDEQTRAIVMIGEIGGSAEEEAAEFIKS----CIKKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG+TAP G+ MGHAGA+I G G A KI A++ AG+ SPA IG +L +LL S Sbjct: 232 AYIAGRTAPLGKRMGHAGAIIKGNMGSAAAKIKALQNAGVVTVSSPAEIGAALKQLLHS 290 >gi|260425312|ref|ZP_05779292.1| succinyl-CoA ligase, alpha subunit [Citreicella sp. SE45] gi|260423252|gb|EEX16502.1| succinyl-CoA ligase, alpha subunit [Citreicella sp. SE45] Length = 294 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 195/298 (65%), Positives = 239/298 (80%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MAVLVDANTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQDHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA T ANASVIYVPP A D+I+E+I+AEIPLIVCITEGIPVLDM+RVK L S Sbjct: 56 SVHEAVHVTGANASVIYVPPPFAADSILEAIDAEIPLIVCITEGIPVLDMMRVKRALIDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPG++TPD+CKIGIMPG I ++G VG++SRSGTLTYEAV QT+ GLGQS+A Sbjct: 116 SSRLIGPNCPGVITPDACKIGIMPGHIHKRGKVGVVSRSGTLTYEAVKQTTDLGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVL++FL D TE+I+M+GEIGGSAEEEAA F+ ++ K+GR KPI Sbjct: 176 VGIGGDPIKGTEHIDVLDMFLDDPETEAIIMIGEIGGSAEEEAAAFIAEQKKKGRWKPIA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKG AE KI AMK AGI +A SPA +G +++ + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEAMKSAGIVVADSPATLGEAVMAAIK 293 >gi|320354456|ref|YP_004195795.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Desulfobulbus propionicus DSM 2032] gi|320122958|gb|ADW18504.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Desulfobulbus propionicus DSM 2032] Length = 291 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 164/299 (54%), Positives = 214/299 (71%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ V+KNT+++VQG+TG+ G FHT I Y T VV G+ P KG +VP+F Sbjct: 1 MSVFVNKNTRLVVQGITGQEGQFHTRSCIAY-GTNVVAGVTPGKGGQKMD----DVPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA+E+T NAS+I VPP A DAI+E+ +A I L+VCITEG+PVLDM+RVK L Sbjct: 56 SVKEAREKTGCNASMILVPPPFAADAIMEAADAGIELVVCITEGVPVLDMMRVKNYLATK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS-VGILSRSGTLTYEAVFQTSQEGLGQST 179 ++RLIGPNCPGI+TP CKIGIMPG + + G G++SRSGTLTYEAV Q +Q G GQ+T Sbjct: 116 TTRLIGPNCPGIITPGECKIGIMPGPMHKPGGPWGVVSRSGTLTYEAVHQLTQAGFGQTT 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT F+D LE F AD T++IVM+GEIGG+AEE A +++K KKP+ Sbjct: 176 CIGIGGDPINGTNFLDCLEAFAADPDTKAIVMIGEIGGNAEENACEWIKAN----TKKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG TAPPGR MGHAGA++SGGKG AE KI AMK +G+ + ++G ++ Sbjct: 232 VGFIAGLTAPPGRRMGHAGAIVSGGKGTAEAKIEAMKASGVHHCANLGKLGELCKQVYK 290 >gi|283470459|emb|CAQ49670.1| succinate-CoA ligase, alpha subunit subfamily [Staphylococcus aureus subsp. aureus ST398] Length = 302 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 167/296 (56%), Positives = 221/296 (74%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y T++V G+ P KG +VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTKIVAGVTPGKGGQVVE----SVPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A SVIYVP A D+I+E+ +A++ +++CITE IPVLDMV+VK L+ Sbjct: 56 TVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIEA 287 >gi|283856281|ref|YP_162302.2| succinyl-CoA synthetase subunit alpha [Zymomonas mobilis subsp. mobilis ZM4] gi|283775277|gb|AAV89191.2| succinyl-CoA synthetase, alpha subunit [Zymomonas mobilis subsp. mobilis ZM4] Length = 294 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 191/299 (63%), Positives = 244/299 (81%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL + TKV+ QG+TG+ G+ HT Q++ Y T++VGG+ P KG +++P+F Sbjct: 1 MSILANATTKVITQGITGQQGSHHTAQSLAY-GTKMVGGVTPGKGGQTH----LDLPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEAK++T A+AS+I+VPP+ AGDAI+E+I+AEIPLIV +TEGIP+LDMVRVK L S Sbjct: 56 SVAEAKQKTGADASMIFVPPAFAGDAILEAIDAEIPLIVTVTEGIPILDMVRVKRALTGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPN PG+LTPDS +IGIMPG+IF+KGSVGI+SRSGTLTYEAVFQTSQ GLGQSTA Sbjct: 116 KSRLIGPNSPGLLTPDSARIGIMPGAIFKKGSVGIVSRSGTLTYEAVFQTSQLGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID+L++FL D+ TESI+M+GEIGGS EE AA+FLK++A++GRKKP+ Sbjct: 176 VGIGGDPVNGTNFIDILDMFLDDDETESIIMIGEIGGSDEENAAEFLKEQARKGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG +APPGR MGHAGA++SG G A KI AM+ AGI + P P++IG +L+ LL Sbjct: 236 GFIAGVSAPPGRHMGHAGAIVSGHSGSAAAKIEAMQSAGIAMTPDPSKIGHTLLNLLKK 294 >gi|229918616|ref|YP_002887262.1| succinyl-CoA synthetase subunit alpha [Exiguobacterium sp. AT1b] gi|229470045|gb|ACQ71817.1| succinyl-CoA synthetase, alpha subunit [Exiguobacterium sp. AT1b] Length = 305 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 223/298 (74%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI DK+TKV++QG+TGK G FH EQ + Y T++VGG+ P KG T NVPVF Sbjct: 1 MSIWADKDTKVIIQGITGKQGLFHGEQMLAY-NTKLVGGVTPGKGGTTVLD---NVPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA E T ANAS+IYVPP+ A D+I+E+ ++ I LI+CITEGIPV+DM++VK LE Sbjct: 57 TVSEAVEATGANASIIYVPPAFAADSIMEAADSGIELIICITEGIPVVDMIQVKRYLEDK 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TP K+GIMPG I KG VGI+SRSGTLTYEAV Q + G+GQSTA Sbjct: 117 PARLIGPNCPGIITPGEAKLGIMPGYIHTKGHVGIVSRSGTLTYEAVHQLTTAGIGQSTA 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID L+ F DE T++++M+GEIGG+AEEEAA+++K KP++ Sbjct: 177 VGIGGDPVNGTNFIDTLKAFNEDEDTKAVIMIGEIGGTAEEEAAEWVKANM----TKPVI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI + GI +A +PA IG +L+ +L Sbjct: 233 GFIGGQTAPEGKRMGHAGAIISGGKGTAAEKIKTLNANGIEVAETPAVIGETLIRVLK 290 >gi|251823775|ref|NP_001156571.1| succinyl coenzyme A synthetase alpha subunit [Acyrthosiphon pisum] gi|239792382|dbj|BAH72542.1| ACYPI009606 [Acyrthosiphon pisum] Length = 330 Score = 315 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 178/299 (59%), Positives = 226/299 (75%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ K+TKV+ QG+TGK GTFH+ QAI Y T +VGG+ P KG G +P+F + Sbjct: 37 NLLLTKDTKVICQGMTGKQGTFHSTQAIEY-GTCMVGGVSPGKGGKTHLG----LPIFNS 91 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA++ T A+A+VIYVPP GA AI E+I+AE+PLIVCITEGIP DMVRVK +L ++ Sbjct: 92 VKEARDETGADATVIYVPPPGAAKAISEAIDAEVPLIVCITEGIPQQDMVRVKHKLIRQN 151 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I KGSVG++SRSGTLTYEAV QTSQ GLGQ+ Sbjct: 152 KSRLLGPNCPGIIAPEQCKIGIMPGHIHLKGSVGVVSRSGTLTYEAVHQTSQVGLGQTLC 211 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T I+++GEIGG EE AA++L + KP+V Sbjct: 212 VGIGGDPFNGTDFIDCLEVFLQDPNTHGIILIGEIGGQQEEMAAEYLIEHNTGPNAKPVV 271 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+ISGGKGGA+DKINA+++AG+ + SPA +G L +L+ Sbjct: 272 SFIAGLTAPPGRRMGHAGAIISGGKGGAQDKINALEKAGVVVTRSPAAMGIELSKLMKK 330 >gi|78223464|ref|YP_385211.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Geobacter metallireducens GS-15] gi|78194719|gb|ABB32486.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Geobacter metallireducens GS-15] Length = 291 Score = 315 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 163/298 (54%), Positives = 218/298 (73%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QGL G G FH A Y TQ+VGG+ P KG T G PV+ Sbjct: 1 MSILINKDTKVITQGL-GATGLFHANGAREY-GTQMVGGVTPGKGGTVIDG----FPVYD 54 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A ASVIYVPP A D+I+E+++A + L++CITEGIPVLDMV+VK ++ Sbjct: 55 TVREAVAKTGATASVIYVPPPFAADSIMEAVDAGLDLVICITEGIPVLDMVKVKQYMQGK 114 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CKIGIMPG I + G VG++SRSGTLTYEAV+Q + GLGQST Sbjct: 115 KTRLVGPNCPGVITPGQCKIGIMPGYIHKPGKVGVVSRSGTLTYEAVWQLTNVGLGQSTC 174 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT +DVL +F D TE+++M+GEIGG++EEE A+F+K+ KP+ Sbjct: 175 VGIGGDPVNGTNHVDVLRMFEEDPDTEAVIMIGEIGGNSEEEGARFVKEHM----TKPVA 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A +K+ ++E GI +A SPA + ++L+++ Sbjct: 231 AYIAGVTAPPGKRMGHAGAIISGGKGTATEKVAILEECGISVAQSPADMAKALLKIYK 288 >gi|254486889|ref|ZP_05100094.1| succinyl-CoA synthase, alpha subunit [Roseobacter sp. GAI101] gi|214043758|gb|EEB84396.1| succinyl-CoA synthase, alpha subunit [Roseobacter sp. GAI101] Length = 285 Score = 315 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 190/288 (65%), Positives = 233/288 (80%), Gaps = 5/288 (1%) Query: 12 LVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAA 71 + QGLTG GTFHTEQAI Y T++VGG+ P KG +++PVF +V EA+ T A Sbjct: 2 ICQGLTGSQGTFHTEQAIAY-GTKMVGGVTPGKGGQTH----LDLPVFNSVHEARHVTDA 56 Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPG 131 NA+VIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM+RVK L+ S SRLIGPNCPG Sbjct: 57 NATVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMRVKRALDGSKSRLIGPNCPG 116 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++TPD+CKIGIMPG I ++GS G++SRSGTLTYEAV QTS GLGQS+AVGIGGDP+KG+ Sbjct: 117 VITPDACKIGIMPGHIHKRGSCGVVSRSGTLTYEAVKQTSDLGLGQSSAVGIGGDPIKGS 176 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 E ID+LE+FLAD T SI+M+GEIGGSAEEEAAQFL DE K+GR KP GF+AG+TAPPG Sbjct: 177 EHIDILEMFLADPETHSIIMIGEIGGSAEEEAAQFLADEKKKGRWKPTAGFIAGRTAPPG 236 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 R MGHAGA+++GGKG AE KINAM+EAGI +A SPA +G ++ E + Sbjct: 237 RRMGHAGAIVAGGKGDAESKINAMREAGIVVADSPATLGEAVQEAINK 284 >gi|17550194|ref|NP_510450.1| hypothetical protein C05G5.4 [Caenorhabditis elegans] gi|1711573|sp|P53596|SUCA_CAEEL RecName: Full=Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor gi|3874024|emb|CAA94107.1| C. elegans protein C05G5.4, confirmed by transcript evidence [Caenorhabditis elegans] Length = 322 Score = 315 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 174/297 (58%), Positives = 225/297 (75%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+VQG TGK GTFH +Q + Y T+VVGG++ K T G +PVF Sbjct: 27 NLKINKDTKVIVQGFTGKQGTFHGKQMLEY-NTKVVGGVNANKAGTEHLG----LPVFKN 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 V+EA+ +T A+ASVIYVP S AG AI E+++AEIPL+VCITEGIP DMVRVK L+++ Sbjct: 82 VSEARNKTGADASVIYVPASAAGSAIEEAMDAEIPLVVCITEGIPQHDMVRVKSRLLKQN 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI++ D CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q G GQ+ Sbjct: 142 KTRLVGPNCPGIISADQCKIGIMPGHIHKRGCIGIVSRSGTLTYEAVHQTTQVGFGQTLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL D T+ I+++GEIGGSAEEEAA +LK+ +KP+V Sbjct: 202 VGIGGDPFNGTNFIDCLNVFLEDPETKGIILIGEIGGSAEEEAAAYLKEHNSGANRKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKG A DKINA++EAG+ + SPA++G S+ Sbjct: 262 SFIAGVTAPPGRRMGHAGAIISGGKGTAADKINALREAGVVVTDSPAKLGTSMATAF 318 >gi|27467842|ref|NP_764479.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis ATCC 12228] gi|251810679|ref|ZP_04825152.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis BCM-HMP0060] gi|282876320|ref|ZP_06285187.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis SK135] gi|38605278|sp|Q8CPH4|SUCD_STAES RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|27315387|gb|AAO04521.1|AE016747_18 succinyl-CoA synthetase alpha chain [Staphylococcus epidermidis ATCC 12228] gi|251805839|gb|EES58496.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis BCM-HMP0060] gi|281295345|gb|EFA87872.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis SK135] gi|329736292|gb|EGG72564.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus epidermidis VCU028] Length = 302 Score = 315 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 166/296 (56%), Positives = 222/296 (75%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T AN SV+YVP A D+IIE+ +A++ +++CITE IPV+DMV+VK L+ Sbjct: 56 TVEEAKNETGANVSVVYVPAPFAADSIIEAADADLDMVICITEHIPVVDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T+++VM+GEIGG+AEEEAAQ++K+ KP++ Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDSETKAVVMIGEIGGTAEEEAAQWIKENM----NKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI + + G+ A +P+ IG +L++ Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTASEKIKTLNDCGVETADTPSEIGTTLIDA 287 >gi|298705781|emb|CBJ28950.1| Succinate--CoA ligase (GDP-forming), alpha subunit [Ectocarpus siliculosus] Length = 322 Score = 315 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 177/298 (59%), Positives = 218/298 (73%), Gaps = 8/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +D+NTKV+VQG TGK GTFH EQAI Y +Q VGG+ PKKG G PVF TV Sbjct: 27 VWIDQNTKVIVQGFTGKQGTFHAEQAIEY-GSQYVGGVTPKKGGQTHLGK----PVFNTV 81 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS-S 121 AEAKE +ASV+YVPP AG A++++IE EIPL+VCITEGIP DM +VK L + + Sbjct: 82 AEAKEGVKPDASVVYVPPPFAGAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALRQQTA 141 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV+QT+ G+GQST V Sbjct: 142 TRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCV 201 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE F D TE IVM+GEIGG AEE+AA++L + KP+V Sbjct: 202 GIGGDPFNGTNFIDCLERFTKDPETEGIVMIGEIGGQAEEDAAEWLMEHGDPA--KPVVS 259 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+ISGGKG A K A+++AG+ I+ SPA++G ++V Sbjct: 260 FIAGSTAPPGRRMGHAGAIISGGKGTAAAKFAALEDAGVYISRSPAQLGSTMVRAFEE 317 >gi|237746926|ref|ZP_04577406.1| succinyl-CoA synthetase subunit alpha [Oxalobacter formigenes HOxBLS] gi|229378277|gb|EEO28368.1| succinyl-CoA synthetase subunit alpha [Oxalobacter formigenes HOxBLS] Length = 292 Score = 315 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 168/300 (56%), Positives = 226/300 (75%), Gaps = 10/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++KN++V+VQGLTGK G FHTE ++ Y + VGG+ PKKG T + +N+PV Sbjct: 1 MSILINKNSRVIVQGLTGKTGAFHTEMSMNYAFGKECYVGGVTPKKGGTTF----LNLPV 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV EAK++T AN SVIYVPP A AI E++EA I ++CITEGIPV DM+R + +++ Sbjct: 57 FNTVKEAKDQTGANVSVIYVPPPFAAAAIDEAVEAGIEFVICITEGIPVEDMLRTRYKMQ 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 ++ L+GPNCPGI+TPD KIGIMPG I +KGS+G++S+SGTLTYEA Q ++ GLGQS Sbjct: 117 GKNTILLGPNCPGIITPDELKIGIMPGHIHKKGSIGVVSKSGTLTYEAASQLAEFGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VG+GGDP+ G + IDVL++F D TE+++MVGEIGG+ EE AA ++K+ KKP Sbjct: 177 TVVGVGGDPINGLKHIDVLKMFNDDPETEAVIMVGEIGGNDEETAALWVKENM----KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VGF+AG TAPPG+ MGHAGA+ISGGKG A++K+ M+E GI + +PA IG++L L Sbjct: 233 VVGFIAGVTAPPGKRMGHAGAIISGGKGTAQEKLAVMEECGITVTRNPAEIGKTLKAALK 292 >gi|57866714|ref|YP_188396.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis RP62A] gi|242242530|ref|ZP_04796975.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis W23144] gi|293366788|ref|ZP_06613464.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis M23864:W2(grey)] gi|81674905|sp|Q5HPU4|SUCD_STAEQ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|57637372|gb|AAW54160.1| succinyl-CoA synthase, alpha subunit [Staphylococcus epidermidis RP62A] gi|242233957|gb|EES36269.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis W23144] gi|291319089|gb|EFE59459.1| succinyl-CoA synthetase subunit alpha [Staphylococcus epidermidis M23864:W2(grey)] gi|319401462|gb|EFV89672.1| succinyl-CoA ligase [Staphylococcus epidermidis FRI909] gi|329724340|gb|EGG60852.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus epidermidis VCU144] gi|329736615|gb|EGG72881.1| succinyl-CoA synthetase, alpha subunit [Staphylococcus epidermidis VCU045] Length = 302 Score = 315 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 167/296 (56%), Positives = 222/296 (75%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T AN SV+YVP A D+IIE+ +A++ +++CITE IPV+DMV+VK L+ Sbjct: 56 TVEEAKNETGANVSVVYVPAPFAADSIIEAADADLDMVICITEHIPVVDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T+++VM+GEIGG+AEEEAAQ++K+ KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDSETKAVVMIGEIGGTAEEEAAQWIKENM----NKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI + + G+ A +P+ IG +L++ Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTASEKIKTLNDCGVETADTPSEIGTTLIDA 287 >gi|300114966|ref|YP_003761541.1| succinyl-CoA synthetase subunit alpha [Nitrosococcus watsonii C-113] gi|299540903|gb|ADJ29220.1| succinyl-CoA synthetase, alpha subunit [Nitrosococcus watsonii C-113] Length = 291 Score = 315 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 223/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDK T+V+ QG TGK GTFH+ QA+ Y TQ+VGG+ P KG G PVF Sbjct: 1 MSILVDKQTRVICQGFTGKQGTFHSRQALEY-GTQLVGGVTPGKGGQTHLGQ----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E T ANA++IYVP + A DAI+E+ + +PLIVCITEGIPVLDM+RVKA L Sbjct: 56 TVAEAVEATGANATMIYVPAAFAADAILEAADGGVPLIVCITEGIPVLDMLRVKAALTGL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S L+GPNCPGI+TP +CKIGIMPG I + G +GI+SRSGTLTYEAV+QTSQ+GLGQST Sbjct: 116 PSYLVGPNCPGIITPGACKIGIMPGDIHQAGRIGIISRSGTLTYEAVYQTSQKGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP++G F+D L LF D TE +++VGEIGGSAEEEAA++++ KP+V Sbjct: 176 VGIGGDPIQGMSFVDCLALFEQDPQTEGVILVGEIGGSAEEEAAEYIQYHVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA+ISGGKG AE K+ A+ AG+ IA SPA +G + + +G Sbjct: 232 AYIAGLTAPKGKRMGHAGAIISGGKGTAEGKLKALSAAGVSIAHSPAEMGACMEQAMG 289 >gi|156088999|ref|XP_001611906.1| succinyl-CoA synthetase, alpha subunit family protein [Babesia bovis] gi|154799160|gb|EDO08338.1| succinyl-CoA synthetase, alpha subunit family protein [Babesia bovis] Length = 328 Score = 315 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 161/299 (53%), Positives = 222/299 (74%), Gaps = 7/299 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW--TGGNVNVPVFT 60 + VDKNTK++ QGLTGK G+ H E + Y T+ VGG++PKK T W + G ++PV++ Sbjct: 31 VYVDKNTKIICQGLTGKQGSLHAEGCMNYYNTKFVGGVNPKKAGTMWQCSEGKHSLPVYS 90 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 +VAEAK+ T A+A+VI+VPP A +IIE++EAE+PLI+CITEGIP +M++VK+ + Sbjct: 91 SVAEAKKETGADATVIFVPPPSAAGSIIEAVEAEMPLIICITEGIPQHEMIKVKSIISDP 150 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S+LIGPNCPGI+ P+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 151 ACKSKLIGPNCPGIIKPEECKIGIMPGHIHKRGCIGIVSRSGTLTYEAVTQTTSNGLGQS 210 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GIGGDP G FIDVL+ F+ D T+ I+++GEIGG+AEE+AA+++K KP Sbjct: 211 VCIGIGGDPFGGLTFIDVLKKFVDDPQTKGIMLIGEIGGNAEEDAAEWIKAN---PTDKP 267 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 IV +AG APPGR MGHAGA+ISG G A+ KI A+++AG+ +A +PA +G ++ + L Sbjct: 268 IVALIAGTCAPPGRRMGHAGAIISGNTGTAQGKIKALRDAGVVVAETPALLGSTMKKEL 326 >gi|324112301|gb|EGC06279.1| succinate-CoA ligase [Escherichia fergusonii B253] gi|325499640|gb|EGC97499.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Escherichia fergusonii ECD227] Length = 290 Score = 315 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 169/299 (56%), Positives = 220/299 (73%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+VLVQG+TGK GTFHTEQAI Y TQ+VGG+ P KG +++ PVF Sbjct: 1 MSVLINKHTRVLVQGITGKNGTFHTEQAIAY-GTQIVGGVTPGKGGQ----LHLDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 ++ EA +T A+ASVIYVP D+++E+IE+ + LIV ITEG+P LDMV+V+ L+ Sbjct: 56 SMKEAMRQTEADASVIYVPAPFVLDSVVEAIESGVKLIVVITEGVPTLDMVKVRRLLDCH 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPGI+TP CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PDVRLIGPNCPGIITPGECKIGIMPGEIHRPGRIGIVSRSGTLTYEAVAQTTALGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FID L LF D T++++M+GEIGG+AEE AA+F++ E KP+ Sbjct: 176 CIGIGGDPVPGTNFIDALRLFENDPQTDAVIMIGEIGGNAEERAAEFIRHEM----NKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VG++AG TAP G+ MGHAGA+ISGG G AEDK A +AG+ +PA +G +L ++ Sbjct: 232 VGYIAGVTAPKGKRMGHAGAIISGGSGSAEDKFRAFDKAGMAWTRNPALLGETLWNVIK 290 >gi|26250849|ref|NP_756889.1| succinyl-CoA synthetase subunit alpha [Escherichia coli CFT073] gi|91213588|ref|YP_543574.1| SucD, succinyl-CoA synthetase subunit alpha [Escherichia coli UTI89] gi|110644397|ref|YP_672127.1| succinyl-CoA synthetase alpha subunit [Escherichia coli 536] gi|117626331|ref|YP_859654.1| succinyl-CoA synthetase alpha subunit [Escherichia coli APEC O1] gi|191171983|ref|ZP_03033528.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli F11] gi|215489396|ref|YP_002331827.1| predicted succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O127:H6 str. E2348/69] gi|218561134|ref|YP_002394047.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Escherichia coli S88] gi|300980467|ref|ZP_07175014.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 200-1] gi|300992978|ref|ZP_07180133.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 45-1] gi|301047015|ref|ZP_07194124.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 185-1] gi|306815830|ref|ZP_07449975.1| succinyl-CoA synthetase alpha chain [Escherichia coli NC101] gi|312965654|ref|ZP_07779883.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli 2362-75] gi|331650071|ref|ZP_08351144.1| succinate-CoA ligase, alpha subunit [Escherichia coli M605] gi|331660625|ref|ZP_08361557.1| succinate-CoA ligase, alpha subunit [Escherichia coli TA206] gi|26111280|gb|AAN83463.1|AE016770_263 Succinyl-CoA synthetase alpha chain [Escherichia coli CFT073] gi|91075162|gb|ABE10043.1| SucD, succinyl-CoA synthetase alpha chain [Escherichia coli UTI89] gi|110345989|gb|ABG72226.1| succinyl-CoA synthetase alpha subunit [Escherichia coli 536] gi|115515455|gb|ABJ03530.1| succinyl-CoA synthetase alpha subunit [Escherichia coli APEC O1] gi|190907748|gb|EDV67342.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli F11] gi|215267468|emb|CAS11922.1| predicted succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Escherichia coli O127:H6 str. E2348/69] gi|218367903|emb|CAR05698.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Escherichia coli S88] gi|222035771|emb|CAP78516.1| SucD, succinyl-CoA synthetase alpha chain (EC62 15) [Escherichia coli LF82] gi|294491040|gb|ADE89796.1| succinyl-CoA synthetase, alpha subunit [Escherichia coli IHE3034] gi|300301060|gb|EFJ57445.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 185-1] gi|300307769|gb|EFJ62289.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 200-1] gi|300406752|gb|EFJ90290.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 45-1] gi|305850805|gb|EFM51261.1| succinyl-CoA synthetase alpha chain [Escherichia coli NC101] gi|307629113|gb|ADN73417.1| succinyl-CoA synthetase alpha chain [Escherichia coli UM146] gi|312289628|gb|EFR17519.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli 2362-75] gi|312948636|gb|ADR29463.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Escherichia coli O83:H1 str. NRG 857C] gi|315291542|gb|EFU50902.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 153-1] gi|315297530|gb|EFU56809.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 16-3] gi|320193418|gb|EFW68055.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Escherichia coli WV_060327] gi|323190078|gb|EFZ75356.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Escherichia coli RN587/1] gi|323950392|gb|EGB46273.1| succinate-CoA ligase [Escherichia coli H252] gi|324007783|gb|EGB77002.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 57-2] gi|324014860|gb|EGB84079.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 60-1] gi|330908384|gb|EGH36903.1| succinyl-CoA ligase [ADP-forming] alpha chain [Escherichia coli AA86] gi|331041016|gb|EGI13173.1| succinate-CoA ligase, alpha subunit [Escherichia coli M605] gi|331051667|gb|EGI23706.1| succinate-CoA ligase, alpha subunit [Escherichia coli TA206] Length = 290 Score = 315 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 168/299 (56%), Positives = 219/299 (73%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+VLVQG+TGK GTFHTEQAI Y TQ+VGG+ P KG ++ PVF Sbjct: 1 MSVLINKHTRVLVQGITGKNGTFHTEQAIAY-GTQIVGGVTPGKGGQRH----LDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 ++ EA +T A+ASVIYVP D+++E+IEA + L+V ITEG+P LDMV+V+ L+ Sbjct: 56 SMKEAMRQTEADASVIYVPAPFVLDSVVEAIEAGVKLVVVITEGVPTLDMVKVRRLLDCH 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++TP CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PDVRLIGPNCPGVITPGECKIGIMPGEIHRPGRIGIVSRSGTLTYEAVAQTTALGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FID L LF D T++++M+GEIGG+AEE AA+F++ E KP+ Sbjct: 176 CIGIGGDPVPGTNFIDALRLFENDPQTDAVIMIGEIGGNAEERAAEFIRHEM----NKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VG++AG TAP G+ MGHAGA+ISGG G AEDK A +AG+ +PA +G +L ++ Sbjct: 232 VGYIAGVTAPKGKRMGHAGAIISGGSGSAEDKFRAFDKAGMAWTRNPALLGETLWNVIK 290 >gi|281181130|dbj|BAI57460.1| succinyl-CoA synthetase alpha subunit [Escherichia coli SE15] Length = 290 Score = 314 bits (805), Expect = 8e-84, Method: Composition-based stats. Identities = 166/299 (55%), Positives = 219/299 (73%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+VLVQG+TGK GTFHTEQAI Y TQ+VGG+ P KG ++ PVF Sbjct: 1 MSVLINKHTRVLVQGITGKNGTFHTEQAIAY-GTQIVGGVTPGKGGQRH----LDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 ++ +A +T A+ASVIYVP D+++E+IEA + L+V ITEG+P LDMV+V+ L+ Sbjct: 56 SMKDAMRQTEADASVIYVPAPFVLDSVVEAIEAGVKLVVVITEGVPTLDMVKVRRLLDCH 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++TP CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PDVRLIGPNCPGVITPGECKIGIMPGEIHRPGRIGIVSRSGTLTYEAVAQTTALGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FID L LF D T++++M+GEIGG+AEE AA+F++ + KP+ Sbjct: 176 CIGIGGDPVPGTNFIDALRLFENDPQTDAVIMIGEIGGNAEERAAEFIRHDM----NKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VG++AG TAP G+ MGHAGA+ISGG G AEDK A +AG+ +PA +G +L ++ Sbjct: 232 VGYIAGVTAPKGKRMGHAGAIISGGSGSAEDKFRAFDKAGMAWTRNPALLGETLWNVIK 290 >gi|228474944|ref|ZP_04059672.1| succinate-CoA ligase, alpha subunit family [Staphylococcus hominis SK119] gi|314936591|ref|ZP_07843938.1| succinyl-CoA synthase, alpha subunit [Staphylococcus hominis subsp. hominis C80] gi|228270929|gb|EEK12317.1| succinate-CoA ligase, alpha subunit family [Staphylococcus hominis SK119] gi|313655210|gb|EFS18955.1| succinyl-CoA synthase, alpha subunit [Staphylococcus hominis subsp. hominis C80] Length = 301 Score = 314 bits (805), Expect = 8e-84, Method: Composition-based stats. Identities = 170/296 (57%), Positives = 223/296 (75%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M + +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MGVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK+ T AN SV+YVP A D+I+E+ +AE+ +++CITE IPV+DM++VK LE Sbjct: 56 TVAEAKKETGANVSVVYVPAPFAADSILEAADAELDMVICITEHIPVVDMIKVKRYLEDR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T+++VM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDEETKAVVMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GFV G+TAPPG+ MGHAGA+ISGGKG A +KI + E G+ A +P+ IG +L+E Sbjct: 232 GFVGGQTAPPGKRMGHAGAIISGGKGTAAEKIKTLNECGVKTADTPSEIGTTLIEA 287 >gi|315658464|ref|ZP_07911336.1| succinyl-CoA synthetase subunit alpha [Staphylococcus lugdunensis M23590] gi|315496793|gb|EFU85116.1| succinyl-CoA synthetase subunit alpha [Staphylococcus lugdunensis M23590] Length = 302 Score = 314 bits (805), Expect = 8e-84, Method: Composition-based stats. Identities = 169/293 (57%), Positives = 221/293 (75%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK+ T AN SV+YVP A D+I+E+ +A++ +++CITE IPV+DMV+VK LE Sbjct: 56 TVAEAKQETGANVSVVYVPAPFAADSILEAADADLDMVICITEHIPVVDMVKVKRYLEGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T+++VM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNNDEETKAVVMIGEIGGTAEEEAAEWIKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 GFV G+TAPPG+ MGHAGA+ISGGKG A +KI + G+ A +P+ IG +L Sbjct: 232 GFVGGQTAPPGKRMGHAGAIISGGKGTAAEKIKTLNSCGVKTADTPSEIGTTL 284 >gi|283770309|ref|ZP_06343201.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus H19] gi|283460456|gb|EFC07546.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Staphylococcus aureus subsp. aureus H19] Length = 302 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 167/296 (56%), Positives = 220/296 (74%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTKIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A SVIYVP A D+I+E+ +A++ +++CITE IPVLDMV+VK L+ Sbjct: 56 TVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+ G+TAP G+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPLGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIEA 287 >gi|115377068|ref|ZP_01464284.1| succinyl-CoA synthetase alpha chain [Stigmatella aurantiaca DW4/3-1] gi|310821310|ref|YP_003953668.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Stigmatella aurantiaca DW4/3-1] gi|115365907|gb|EAU64926.1| succinyl-CoA synthetase alpha chain [Stigmatella aurantiaca DW4/3-1] gi|309394382|gb|ADO71841.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Stigmatella aurantiaca DW4/3-1] Length = 299 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 176/298 (59%), Positives = 229/298 (76%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+ +TKVL QG+TG AG+FH++Q + Y T++VGG+ P KG T + G VPVF Sbjct: 1 MSILVNHDTKVLCQGITGSAGSFHSKQMLEY-GTKLVGGVTPGKGGTDFEGK---VPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TVA+A ++T AN SV++VPP A D+I+E+ +A I LI+ ITEGIPV DMVR K LE K Sbjct: 57 TVADAVKQTGANTSVLFVPPPFAADSIMEAADAGIALIITITEGIPVNDMVRAKRYLEGK 116 Query: 120 SSSRLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RLIGPNCPG++TP+ CKIGIMPG I + G +G++SRSGTLTYEAV+Q +Q GLGQS Sbjct: 117 PGVRLIGPNCPGVITPEAKCKIGIMPGHIHKPGRIGVVSRSGTLTYEAVYQLTQLGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV GT F+DVL+LF AD T++++M+GEIGG+AEE+AA+++ R KP Sbjct: 177 TAVGIGGDPVNGTNFVDVLKLFNADPETDAVIMIGEIGGTAEEDAAKYV----AREFTKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 I GF+AG++APPG+ MGHAGA+ISGG+G A +KI AM+ AG +A SPA +G +L E Sbjct: 233 IAGFIAGQSAPPGKRMGHAGAIISGGQGTAAEKIKAMEAAGFLMAASPAELGTTLQEA 290 >gi|219363381|ref|NP_001136494.1| hypothetical protein LOC100216609 [Zea mays] gi|194695918|gb|ACF82043.1| unknown [Zea mays] Length = 331 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 182/298 (61%), Positives = 229/298 (76%), Gaps = 9/298 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK+T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF + Sbjct: 36 AVFVDKSTRVICQGITGKNGTFHTEQAIEY-GTNMVGGVTPKKGGTEHLG----LPVFNS 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMV+VKA L +S Sbjct: 91 VAEAKAETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVKVKAALNRQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 151 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTC 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE IV++GEIGG+AEE+AA F+++ + KP+V Sbjct: 211 VGIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGTAEEDAATFIQESKTQ---KPVV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA+++GGKG A+DKI A++EAG+ + SPA+IG ++ E+ Sbjct: 268 AFIAGLTAPPGRRMGHAGAIVAGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIFK 325 >gi|78223275|ref|YP_385022.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Geobacter metallireducens GS-15] gi|78194530|gb|ABB32297.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Geobacter metallireducens GS-15] Length = 296 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 163/298 (54%), Positives = 218/298 (73%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QGL G G FH + A Y TQ+VGG+ P KG T G PV+ Sbjct: 1 MSILINKDTKVITQGL-GATGLFHAQGAREY-GTQMVGGVTPGKGGTVVDG----FPVYD 54 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A +T A ASVIYVPP A DAI+E+++A I L +CITEGIPVLDMV+VK ++ Sbjct: 55 TVRDAVNQTGATASVIYVPPPFAADAIMEAVDAGIELAICITEGIPVLDMVKVKQYMQGK 114 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CKIGIMPG I + G VG++SRSGTLTYEAV+Q + GLGQST Sbjct: 115 KTRLVGPNCPGVITPGECKIGIMPGYIHKPGKVGVVSRSGTLTYEAVWQLTNVGLGQSTC 174 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT +DVL +F D TE+++M+GEIGG++EEE A+F+K+ KP+ Sbjct: 175 VGIGGDPVNGTNHVDVLRMFEEDPDTEAVIMIGEIGGNSEEEGARFVKEYM----TKPVA 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+I+GGKG A +K+ ++E GI +A SPA + ++L+++ Sbjct: 231 AYIAGMTAPPGKRMGHAGAIIAGGKGTATEKVAILEECGISVAQSPADMAKALLKVYK 288 >gi|194333247|ref|YP_002015107.1| succinyl-CoA synthetase subunit alpha [Prosthecochloris aestuarii DSM 271] gi|194311065|gb|ACF45460.1| succinyl-CoA synthetase, alpha subunit [Prosthecochloris aestuarii DSM 271] Length = 300 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 166/304 (54%), Positives = 226/304 (74%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T+++VQG+TG GTFHT Q + Y T VV G+ P KG + G + Sbjct: 1 MSVLVNKDTRLVVQGITGGEGTFHTSQILEY-GTNVVAGVTPGKGGLQYNGNEKDAFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPV+ TV +A E ANASVI+VP A DAI+E+ EA + +I+CITEGIPV DM++ Sbjct: 60 VPVYNTVKDAVEEAGANASVIFVPAPFAADAIMEAAEAGLKVIICITEGIPVNDMMKAYN 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + LIGPNCPG++TPD K+GIMPG I +KG++G++SRSGTLTYEAV Q + GL Sbjct: 120 YVQEKGAVLIGPNCPGVITPDEAKVGIMPGFIHKKGTIGVVSRSGTLTYEAVHQLTDVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT FID ++LF D+ TE ++M+GEIGG+AEEEAA+++K Sbjct: 180 GQSTCIGIGGDPIIGTRFIDAIKLFAKDDETEGLIMIGEIGGTAEEEAAEYIKRH----F 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG A++KI AM+ AGI + +PA IG ++++ Sbjct: 236 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTADEKIKAMERAGIHVVENPADIGDAMLK 295 Query: 296 LLGS 299 LG Sbjct: 296 ALGR 299 >gi|241761111|ref|ZP_04759200.1| succinyl-CoA synthetase, alpha subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374730|gb|EER64191.1| succinyl-CoA synthetase, alpha subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 294 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 192/299 (64%), Positives = 245/299 (81%), Gaps = 5/299 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL + TKV+ QG+TG+ G+ HT Q++ Y T++VGG+ P KG +++P+F Sbjct: 1 MSILANATTKVITQGITGQQGSHHTAQSLAY-GTKMVGGVTPGKGGQTH----LDLPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEAK++T A+AS+I+VPP+ AGDAI+E+I+AEIPLIV +TEGIP+LDMVRVK L S Sbjct: 56 SVAEAKQKTGADASMIFVPPAFAGDAILEAIDAEIPLIVTVTEGIPILDMVRVKRALTGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPN PG+LTPDS +IGIMPG+IF+KGSVGI+SRSGTLTYEAVFQTSQ GLGQSTA Sbjct: 116 KSRLIGPNSPGLLTPDSARIGIMPGAIFKKGSVGIVSRSGTLTYEAVFQTSQLGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID+L++FL D+ATESI+M+GEIGGS EE AA+FLK++A++GRKKP+ Sbjct: 176 VGIGGDPVNGTNFIDILDMFLDDDATESIIMIGEIGGSDEENAAEFLKEQARKGRKKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG +APPGR MGHAGA++SG G A KI AM+ AGI + P P++IG +L+ LL Sbjct: 236 GFIAGVSAPPGRHMGHAGAIVSGHSGSAAAKIEAMESAGIAMTPDPSKIGHTLLNLLKK 294 >gi|224120514|ref|XP_002318347.1| predicted protein [Populus trichocarpa] gi|222859020|gb|EEE96567.1| predicted protein [Populus trichocarpa] Length = 293 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 186/297 (62%), Positives = 231/297 (77%), Gaps = 9/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF TV Sbjct: 1 VFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNTV 55 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 AEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMVRVKA L +S Sbjct: 56 AEAKAETKANASVIYVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSK 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G VGI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 116 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D +E FLAD TE I+++GEIGG+AEE+AA +K+ G +KP+V Sbjct: 176 GIGGDPFNGTNFVDCIEKFLADSQTEGIILIGEIGGTAEEDAAALIKE---SGTEKPVVA 232 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG+TAPPGR MGHAGA++SGGKG A+DKI ++EAG+ + SPA+IG +++++ Sbjct: 233 FIAGQTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVAMLDVFK 289 >gi|312375154|gb|EFR22577.1| hypothetical protein AND_14503 [Anopheles darlingi] Length = 465 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 177/324 (54%), Positives = 230/324 (70%), Gaps = 30/324 (9%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ N+KV+ QG TGK GTFH++QAI Y TQ+VGG+ P KG ++ PVF T Sbjct: 144 NLKLNSNSKVICQGFTGKQGTFHSQQAIEY-GTQLVGGVSPGKGGRTH----LDRPVFNT 198 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+ T A ASVIYVPP GA AI+ESIEAE+PLIVCITEG+P DMV+VK L +S Sbjct: 199 VAEAKKATGAEASVIYVPPPGAAKAIMESIEAEMPLIVCITEGVPQHDMVKVKHALLAQS 258 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 259 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 318 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA--------- 231 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE AA +L Sbjct: 319 VGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEENAAAYLMQYNQVDSIDIDY 378 Query: 232 ---------------KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMK 276 + + KP+V F+AG +APPGR MGHAGA+ISGGKGGA+DKINA++ Sbjct: 379 DNGCGRLSNSIFLPLQGIKAKPVVSFIAGLSAPPGRRMGHAGAIISGGKGGAQDKINALE 438 Query: 277 EAGICIAPSPARIGRSLVELLGSL 300 +AG+ + SPA++G+ L + + L Sbjct: 439 KAGVIVTRSPAQMGKELFKEMKRL 462 >gi|118602195|ref|YP_903410.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567134|gb|ABL01939.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 289 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 178/298 (59%), Positives = 232/298 (77%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNT+V+ QG TGK GTFH+EQ+I Y TQ VGG+ P KG ++N PVF Sbjct: 1 MSVLIDKNTRVITQGFTGKQGTFHSEQSITY-GTQFVGGVTPNKGGQ----KHLNFPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T ANAS+IYVPP A +I+E+IEA++P+IVCITEGIP+ DM+++KA L+ S Sbjct: 56 TVAEAMNATNANASMIYVPPQFAYVSILEAIEAQMPVIVCITEGIPIQDMLKIKAILKTS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++TPD CK+GIMPG+I + GSVG++SRSGTLTYEAV QT+Q GLGQST Sbjct: 116 DSILIGPNCPGVITPDECKLGIMPGNIHQNGSVGVISRSGTLTYEAVHQTTQSGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP++G F+D L LF D T+SI+MVGEIGGSAEEEAA++++ KP+V Sbjct: 176 IGIGGDPIQGMSFVDCLALFEMDPQTQSIIMVGEIGGSAEEEAAEYIQSNVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG +AP G+ MGHAGAVI+ G A DKINA+K+ G+ IAP+PA +G++L+E+L Sbjct: 232 SYIAGLSAPKGKRMGHAGAVINASTGKAIDKINALKKVGVAIAPTPATMGKTLLEILA 289 >gi|91087643|ref|XP_973269.1| PREDICTED: similar to succinyl-CoA synthetase small subunit, putative [Tribolium castaneum] gi|270010712|gb|EFA07160.1| hypothetical protein TcasGA2_TC010157 [Tribolium castaneum] Length = 622 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 162/299 (54%), Positives = 216/299 (72%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + K +K++ QG TGK TFH E+A+ Y T +VGG+ P KG G +PVF T Sbjct: 18 NLKLTKASKLICQGFTGKQATFHCERALEY-GTLLVGGVTPGKGGKKHLG----LPVFNT 72 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA++ + S+IYVPP A A+ E++EAEIPLIVCITEGIP DMV+ + RL + Sbjct: 73 VKEARDALKPDVSIIYVPPFAATKALHEALEAEIPLIVCITEGIPQHDMVKFRYRLSRQD 132 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CK+GIMP I ++G +GI+SRSGTLTYEAV QT++ GLGQ+ Sbjct: 133 KSRLVGPNCPGIIAPEQCKVGIMPAMIHKRGCIGIVSRSGTLTYEAVNQTTKHGLGQTLV 192 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+++GEIGG AEEEAA+FLK ++KP+V Sbjct: 193 VGIGGDPYNGTNFIDCLDIFLKDPDTKGIILIGEIGGCAEEEAAEFLKKNNTGDKRKPVV 252 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG +APPGR MGHAGA+ISGGKGGA +K+ A++ AG+ IA SPA +G L + + Sbjct: 253 SYIAGLSAPPGRRMGHAGAIISGGKGGAPEKMAALRNAGVIIANSPALMGDHLKTEMDN 311 >gi|148244313|ref|YP_001219007.1| succinyl-CoA synthetase alpha subunit [Candidatus Vesicomyosocius okutanii HA] gi|146326140|dbj|BAF61283.1| succinyl-CoA synthetase alpha subunit [Candidatus Vesicomyosocius okutanii HA] Length = 289 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 225/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNT+V+ QG TGK GTFH++Q+I+Y TQ+VGG+ P KG +N+PVF Sbjct: 1 MSILIDKNTRVITQGFTGKQGTFHSKQSIIY-GTQIVGGVTPNKGGQRH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T EA T ANAS+IYVPP A +I+E+IE IP+I CITEGIPV DM+++KA L+KS Sbjct: 56 TTKEAINETLANASIIYVPPRFAYASILEAIETNIPVIACITEGIPVQDMLKIKAILKKS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++TPD CK+GIMPG+I + GSVG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 DSTLIGPNCPGVITPDECKLGIMPGNIHKAGSVGVISRSGTLTYEAVHQTTLVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP++G +FID L LF D T+SIVM+GEIGGS EEEAA++++ KP++ Sbjct: 176 IGIGGDPIQGMDFIDCLALFETDSQTKSIVMIGEIGGSTEEEAAEYIQSNIS----KPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG P G+ MGH+GAVIS G G A DKI A+++ G+ IAP+P IG +L+E+L Sbjct: 232 SYIAGLNVPQGKRMGHSGAVISAGTGKAIDKIKALRKVGVAIAPTPTSIGETLLEILE 289 >gi|302036211|ref|YP_003796533.1| succinyl-CoA synthetase, NAD(P)-binding subunit alpha [Candidatus Nitrospira defluvii] gi|300604275|emb|CBK40607.1| Succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Candidatus Nitrospira defluvii] Length = 290 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 165/299 (55%), Positives = 216/299 (72%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNT+V+VQG+TGK G+FH Q Y T++V G+ P K G +PVF Sbjct: 1 MSILVNKNTRVVVQGITGKEGSFHATQCKAY-GTKMVAGVTPGKAGQEVEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A ++T + S+I+VPP DAI+E+ +A + LI+CITEGIPV DMV+VK L Sbjct: 56 TVADAVKKTDCDTSLIFVPPPFCADAILEAADAGVKLIICITEGIPVNDMVKVKRALHGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++T D KIGIMPG I ++G VG++SRSGTLTYEAV Q S GLG++T Sbjct: 116 DVRLIGPNCPGVITVDEAKIGIMPGFIHKRGVVGVVSRSGTLTYEAVHQLSTLGLGETTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+DVL LF D T+++VM+GEIGG AEE+AA+++K KKP++ Sbjct: 176 VGIGGDPVNGTGFVDVLPLFEQDSETQAVVMIGEIGGDAEEKAAEYIKKHV----KKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+ISGGKG A +K+ A++ AG+ + +PA IG ++ LG Sbjct: 232 SFIAGITAPPGRRMGHAGAIISGGKGTATEKMKALEAAGVRVVKNPAEIGHAVKAALGR 290 >gi|148260622|ref|YP_001234749.1| succinyl-CoA synthetase, alpha subunit [Acidiphilium cryptum JF-5] gi|326403816|ref|YP_004283898.1| succinyl-CoA ligase alpha subunit [Acidiphilium multivorum AIU301] gi|146402303|gb|ABQ30830.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Acidiphilium cryptum JF-5] gi|325050678|dbj|BAJ81016.1| succinyl-CoA ligase alpha subunit [Acidiphilium multivorum AIU301] Length = 291 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 192/297 (64%), Positives = 234/297 (78%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+ TKV+ QG TG GTFH+EQAI Y T+V+GG+ P KG T +++PVF Sbjct: 1 MAILVNAETKVITQGFTGAQGTFHSEQAIAY-GTKVMGGVTPGKGGTRH----LDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E T A+AS IYVPP A DAI+E+I+AEIPLIVCITEGIPVLDMV+V L S Sbjct: 56 TVAEAREATGADASAIYVPPPFAADAILEAIDAEIPLIVCITEGIPVLDMVKVHRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S L+GPNCPG++TPD+CKIGIMPG I R+G VGI+SRSGTLTYEAV QT+ GLGQS+ Sbjct: 116 KSILVGPNCPGVITPDACKIGIMPGHIHRRGKVGIVSRSGTLTYEAVAQTTAAGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKG +F+DVLE+FLAD TE+++M+GEIGG +E EAA+FL A+ KKP V Sbjct: 176 VGIGGDPVKGLDFVDVLEMFLADNETEALIMIGEIGGQSEIEAAEFL---ARNKVKKPTV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPGR MGHAGAVISGG+ A+ KI AMK AGI +A SPA +G ++V+ L Sbjct: 233 GFIAGVTAPPGRRMGHAGAVISGGRDTAQAKIEAMKAAGIHVADSPASLGSTMVKAL 289 >gi|292572046|gb|ADE29961.1| Succinyl-CoA synthetase alpha chain [Rickettsia prowazekii Rp22] Length = 292 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 179/300 (59%), Positives = 230/300 (76%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++K TKV+ QG TG GTFH+EQAI Y T +VGG+ P KG +N+PV+ Sbjct: 1 MAILINKKTKVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGHTH----LNLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK +T ANASVIYVPP A D+I+E+I+A+I ++VCITEGIPVLDM++VK L S Sbjct: 56 TVHEAKAKTGANASVIYVPPGFAADSILEAIDAKIEVVVCITEGIPVLDMIKVKRALIGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPGECKIGIMPGHIHKIGDIGIVSRSGTLTYEAVAQTTAAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT F+D +E+FL D+ T++I+++GEIGGSAEE+AA F+K KKPIV Sbjct: 176 VGIGGDPVNGTSFVDCIEMFLQDDETKAIIIIGEIGGSAEEDAADFIKQSKI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAP + MGHAGA+ISGGKG AEDK+ ++ AG+ I SPA IG+++++LL + Sbjct: 233 SFIAGITAPADKRMGHAGAIISGGKGSAEDKVEVLQSAGVIITRSPADIGKTMLDLLNKI 292 >gi|258434840|ref|ZP_05688914.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9299] gi|257849201|gb|EEV73183.1| succinyl-CoA synthetase subunit alpha [Staphylococcus aureus A9299] Length = 302 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 167/293 (56%), Positives = 219/293 (74%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDYS-TKIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A SVIYVP A D+I+E+ +A++ +++CITE IPVLDMV+VK L+ Sbjct: 56 TVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTL 284 >gi|222151081|ref|YP_002560235.1| succinyl-CoA synthetase alpha subunit [Macrococcus caseolyticus JCSC5402] gi|222120204|dbj|BAH17539.1| succinyl-CoA synthetase alpha subunit [Macrococcus caseolyticus JCSC5402] Length = 302 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 170/295 (57%), Positives = 215/295 (72%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M + +DK+TKV+VQG+TG FHT+Q I Y T++V G+ P KG G VPVF Sbjct: 1 MGVFIDKDTKVIVQGITGSTALFHTKQMIEY-GTKIVAGVTPGKGGMEVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A SVIYVP A DAI+E ++AE+ L +CITE IPVLDMV+VK ++ Sbjct: 56 TVEEAVKATGATVSVIYVPAPFAADAIVECVDAELDLAICITEHIPVLDMVKVKRYMQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q +Q G+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTQAGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID LE F D T ++VM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDALEAFNNDPETLAVVMIGEIGGTAEEEAAEWVKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI M GI A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTMNACGIKTAATPSEIGSTLIE 286 >gi|75294330|sp|Q6ZL94|SUCA_ORYSJ RecName: Full=Probable succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor gi|34393512|dbj|BAC83073.1| putative succinyl-CoA ligase alpha subunit [Oryza sativa Japonica Group] gi|125600835|gb|EAZ40411.1| hypothetical protein OsJ_24862 [Oryza sativa Japonica Group] gi|215769291|dbj|BAH01520.1| unnamed protein product [Oryza sativa Japonica Group] Length = 331 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 184/298 (61%), Positives = 230/298 (77%), Gaps = 9/298 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK+T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF + Sbjct: 36 AVFVDKSTRVICQGITGKNGTFHTEQAIEY-GTTMVGGVTPKKGGTEHLG----LPVFNS 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMV+VKA L ++S Sbjct: 91 VAEAKAETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVKVKAALNKQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G VGI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 151 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTC 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE IV++GEIGG+AEE+AA F+++ + KP+V Sbjct: 211 VGIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGTAEEDAAAFIQESKTQ---KPVV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA++SGGKG A+DKI A++EAG+ + SPA+IG ++ E+ Sbjct: 268 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIFK 325 >gi|308802363|ref|XP_003078495.1| putative succinyl-CoA ligase alpha subunit (ISS) [Ostreococcus tauri] gi|116056947|emb|CAL53236.1| putative succinyl-CoA ligase alpha subunit (ISS) [Ostreococcus tauri] Length = 331 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 183/299 (61%), Positives = 226/299 (75%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VD NT+V+VQG TGK GTFH+EQAI Y T+VVGG+ PKKG T G +PVF T Sbjct: 37 AVFVDGNTRVIVQGFTGKNGTFHSEQAIAY-GTKVVGGVTPKKGGTTHLG----LPVFDT 91 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA T ANASVIYVPP A AI+E++EAEI L+VCITEG+P DMVRVK L +S Sbjct: 92 VREAVVETKANASVIYVPPPFAAKAIMEAVEAEIDLVVCITEGVPQHDMVRVKRALMSQS 151 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +G++SRSGTLTYEAV+QT+ GLGQST Sbjct: 152 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGVVSRSGTLTYEAVYQTTVTGLGQSTC 211 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE I+M+GEIGG+AEEEAA+F++ G KPIV Sbjct: 212 VGIGGDPFNGTNFVDCLEKFVKDPQTEGIIMIGEIGGTAEEEAAEFIRA---SGTDKPIV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+ISGGKGGA DKI A++ AG+ + SPA++G+++ ++ Sbjct: 269 SFIAGLTAPPGRRMGHAGAIISGGKGGASDKIAALEAAGVRVVKSPAKMGQAMYDMFAE 327 >gi|126654066|ref|ZP_01725892.1| succinyl-CoA synthetase subunit alpha [Bacillus sp. B14905] gi|126589446|gb|EAZ83593.1| succinyl-CoA synthetase subunit alpha [Bacillus sp. B14905] Length = 300 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 170/299 (56%), Positives = 221/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++ ++K+TKV+VQG+TG+ FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MAVFINKDTKVIVQGITGETALFHTKQMLEY-GTKIVAGVTPGKGGLEIEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A SVIYVP A DAI+E+++AE+ L +CITE IPVLDMV+VK +E Sbjct: 56 TVAEAVAATGATTSVIYVPAPFAADAILEAVDAELELTICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I KG VG++SRSGTLTYEAV Q +Q G+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLTQAGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLE F D T ++VM+GEIGG+AEEEAA +++ KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLEAFNNDPETYAVVMIGEIGGTAEEEAAAWIQANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI AM AGI +A +P+ IG +L++++ Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKAMNAAGIEVAETPSVIGETLIKVIKE 290 >gi|289550963|ref|YP_003471867.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Staphylococcus lugdunensis HKU09-01] gi|289180495|gb|ADC87740.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Staphylococcus lugdunensis HKU09-01] Length = 302 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 169/293 (57%), Positives = 221/293 (75%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y TQ+V G+ P KG G VPV+ Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTQIVAGVTPGKGGQVVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK+ T AN SV+YVP A D+I+E+ +A++ +++CITE IPV+DMV+VK LE Sbjct: 56 TVAEAKQETGANVSVVYVPAPFAADSILEAADADLDMVICITEHIPVVDMVKVKRYLEGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F DE T+++VM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNDDEETKAVVMIGEIGGTAEEEAAEWIKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 GFV G+TAPPG+ MGHAGA+ISGGKG A +KI + G+ A +P+ IG +L Sbjct: 232 GFVGGQTAPPGKRMGHAGAIISGGKGTAAEKIKTLNSCGVKTADTPSEIGITL 284 >gi|94677017|ref|YP_588571.1| succinyl-CoA synthetase, alpha subunit [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94220167|gb|ABF14326.1| succinyl-CoA synthetase, alpha subunit [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 294 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 163/297 (54%), Positives = 222/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QGLTG+ G+FH+ QA+ Y T++VGG+ P KG TY G +PVF Sbjct: 1 MSILINKHTKVICQGLTGRQGSFHSAQALAY-GTKIVGGVTPGKGGTYHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A SVIYVP DAI+E+I+A I LI+CITEG+P+LDM+ +KA+L++ Sbjct: 56 TVREACYQTCATTSVIYVPAPFCKDAILEAIDAGIQLIICITEGLPILDMLVIKAKLKQR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + R+IGPNCPGI+TP CKIGIMPG I + G +GI+SRSG+LTYEAV +T+ LGQS+ Sbjct: 116 NVRMIGPNCPGIITPGECKIGIMPGHIHQPGRIGIVSRSGSLTYEAVKETNDTNLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGD + G+ FID+++LF D TE+I+++GEIGG AEEEAA ++K+ KP+V Sbjct: 176 VGIGGDIILGSNFIDIIKLFELDPQTEAIILIGEIGGDAEEEAAIYIKNHI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G++AG TAP G+ MGHAGA+I+GGKG A++K+ ++ AGI S A IG+ L +L Sbjct: 232 GYIAGFTAPQGKRMGHAGAIITGGKGSAKEKLLLLEAAGINTVRSLADIGQVLKRIL 288 >gi|262277899|ref|ZP_06055692.1| succinyl-CoA ligase (ADP-forming) subunit alpha [alpha proteobacterium HIMB114] gi|262225002|gb|EEY75461.1| succinyl-CoA ligase (ADP-forming) subunit alpha [alpha proteobacterium HIMB114] Length = 291 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 194/297 (65%), Positives = 236/297 (79%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TK++ QG TG GTFH+EQA+ Y T +VGG+ PKKG G PVF Sbjct: 1 MSVLVNKDTKLICQGFTGANGTFHSEQALAY-GTNLVGGVTPKKGGQVHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A+A++IYVP A AIIE+I+A+IPLIVCITEGIP+LDM++VK +L+ S Sbjct: 56 TVKEAVDETRADATMIYVPAKFAASAIIEAIDAKIPLIVCITEGIPILDMIKVKEKLQDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPGI+TPD CKIGIMPG I +KG+VGI+SRSGTLTYEAV QT+ EGLGQST Sbjct: 116 NSRLIGPNCPGIITPDECKIGIMPGHIHKKGTVGIVSRSGTLTYEAVAQTTAEGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT FID L+LFL DE TESI+M+GEIGGSAEEEAA+FLK+ KKP V Sbjct: 176 IGIGGDPVNGTNFIDCLDLFLKDEKTESIIMIGEIGGSAEEEAAEFLKNN---SIKKPTV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPGR MGHAGA+I+GGKGGA+DKI M+ GI + SPA IG++L +L Sbjct: 233 GFIAGITAPPGRRMGHAGAIIAGGKGGAKDKIKTMQSCGITVTDSPADIGKTLKSVL 289 >gi|321465554|gb|EFX76555.1| hypothetical protein DAPPUDRAFT_306118 [Daphnia pulex] Length = 327 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 224/298 (75%), Gaps = 7/298 (2%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + K+T+VL QG TGK GTFH++QAI Y T +VGG+ P KG G VPVF TV E Sbjct: 35 LTKSTRVLCQGFTGKQGTFHSKQAIDY-GTNMVGGVSPGKGGKVHLG----VPVFNTVLE 89 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSR 123 AKE +A+VIYVPP GA AI+E+++AEIPLIVCITEGIP DMV+VK RL ++ SR Sbjct: 90 AKEAVQPDATVIYVPPPGAAKAIMEAMDAEIPLIVCITEGIPQQDMVKVKHRLMRQNKSR 149 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 LIGPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQ+ VGI Sbjct: 150 LIGPNCPGIIAPGKCKIGIMPGHIHQQGCVGIVSRSGTLTYEAVHQTTQVGLGQTLCVGI 209 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDP GT FID LE+FL D T+ I+++GEIGG AEE AA++L +KP+V F+ Sbjct: 210 GGDPFNGTNFIDCLEVFLKDPETKGIILIGEIGGGAEERAAEYLTQHNSGDNRKPVVSFI 269 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS-LVELLGSL 300 AG TAPPGR MGHAGA+ISGGKGGA+DKI A++ AG+ + SPA++G + + E++G + Sbjct: 270 AGLTAPPGRRMGHAGAIISGGKGGAQDKIMALERAGVVVTRSPAQLGTTLMKEMVGKV 327 >gi|330720907|gb|EGG99089.1| Succinyl-CoA ligase [ADP-forming] alpha chain [gamma proteobacterium IMCC2047] Length = 291 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 216/298 (72%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QGLTG G+FHTEQA L C TQVV G+ P KG G +PVF Sbjct: 1 MSILIDKNTKVICQGLTGAQGSFHTEQA-LACGTQVVAGVVPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAKE T A ASV+YVP + D+I+E+ A I LIVCITEGIP LDM+ VK + ++ Sbjct: 56 SVKEAKEVTGATASVLYVPAAFCKDSILEAANAGIELIVCITEGIPTLDMLYVKEKCDQL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP CKIGIMP SI G VG++SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRLVGPNCPGVITPGECKIGIMPASIHLPGKVGVVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L LF AD TE+IVM+GEIGG+AEEEAA +++D KP+V Sbjct: 176 VGIGGDPIPGSHFIDILALFEADPKTEAIVMIGEIGGTAEEEAAAYIRDHVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG AP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L E+ G Sbjct: 232 SYIAGVAAPAGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLACIGEALAEITG 289 >gi|297537991|ref|YP_003673760.1| succinyl-CoA synthetase subunit alpha [Methylotenera sp. 301] gi|297257338|gb|ADI29183.1| succinyl-CoA synthetase, alpha subunit [Methylotenera sp. 301] Length = 293 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 224/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKVL QG TGK GTFH+EQA+ Y T++VGG+ P KG G +PVF Sbjct: 1 MSILVNKNTKVLCQGFTGKQGTFHSEQALAY-GTKMVGGVTPGKGGMSHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A T A ASVIYVPP+ A D+I+E+ +A I LI+CITEGIPVLDM+ VKA L+ + Sbjct: 56 TMRDAVRTTGATASVIYVPPAFAADSILEACDAGIDLIICITEGIPVLDMLNVKAALKAN 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++LIGPNCPG++TPD CKIGIMPGSI +G VGI+SRSGTLTYEAV QT+ LGQST Sbjct: 116 GTKLIGPNCPGVITPDECKIGIMPGSIHMRGKVGIVSRSGTLTYEAVHQTTALNLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KG FI+ L++F AD TE+I+MVGEIGGS EE AA+++K KP+ Sbjct: 176 VGIGGDPIKGLNFIECLQMFEADSETEAIIMVGEIGGSDEEAAAEYIKSHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG+TAP G+ MGHAGA+ISGG G A DKI A++ AG +A SPA +G +++ + + Sbjct: 232 AYIAGQTAPAGKRMGHAGAIISGGSGKAVDKIRALELAGAVVASSPAGLGEAVLAAISN 290 >gi|237703621|ref|ZP_04534102.1| succinyl-CoA synthetase subunit alpha [Escherichia sp. 3_2_53FAA] gi|226901533|gb|EEH87792.1| succinyl-CoA synthetase subunit alpha [Escherichia sp. 3_2_53FAA] gi|315287843|gb|EFU47245.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 110-3] gi|323954474|gb|EGB50258.1| succinate-CoA ligase [Escherichia coli H263] Length = 290 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 168/299 (56%), Positives = 219/299 (73%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+VLVQG+TGK GTFHTEQAI Y TQ+VGG+ P KG ++ PVF Sbjct: 1 MSVLINKHTRVLVQGITGKNGTFHTEQAIAY-GTQIVGGVTPGKGGQRH----LDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 ++ EA +T A+ASVIYVP D+++E+IEA + L+V ITEG+P LDMV+V+ L+ Sbjct: 56 SMKEAMPQTEADASVIYVPAPFVLDSVVEAIEAGVKLVVVITEGVPTLDMVKVRRLLDCH 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++TP CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PDVRLIGPNCPGVITPGECKIGIMPGEIHRPGRIGIVSRSGTLTYEAVAQTTALGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FID L LF D T++++M+GEIGG+AEE AA+F++ E KP+ Sbjct: 176 CIGIGGDPVPGTNFIDALRLFENDPQTDAVIMIGEIGGNAEERAAEFIRHEM----NKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VG++AG TAP G+ MGHAGA+ISGG G AEDK A +AG+ +PA +G +L ++ Sbjct: 232 VGYIAGVTAPKGKRMGHAGAIISGGSGSAEDKFRAFDKAGMAWTRNPALLGETLWNVIK 290 >gi|172057899|ref|YP_001814359.1| succinyl-CoA synthetase subunit alpha [Exiguobacterium sibiricum 255-15] gi|171990420|gb|ACB61342.1| succinyl-CoA synthetase, alpha subunit [Exiguobacterium sibiricum 255-15] Length = 304 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 172/299 (57%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI V+++TKV++QG+TG G FH EQ I Y T +VGG+ P KG T G VPVF Sbjct: 1 MSIWVNESTKVIIQGITGNQGMFHGEQMIDY-GTNLVGGVTPGKGGTEVLG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A E+T ANAS+IYVPP+ A DAI+E+ +A I LI+CITEGIPVLDMV+VK L+ Sbjct: 56 TVAQAVEKTGANASIIYVPPAFAADAIMEAADANIALIICITEGIPVLDMVKVKRYLDGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG I G VGI+SRSGTLTYEAV Q + G+GQSTA Sbjct: 116 PVRLIGPNCPGVITPGVAKLGIMPGYIHTPGHVGIVSRSGTLTYEAVHQLTTAGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT+FID L+ F D T++++M+GEIGG+AEEEAA+++K KP++ Sbjct: 176 VGIGGDPVNGTDFIDTLKAFNEDPETKAVIMLGEIGGTAEEEAAEWVKANM----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI ++ GI +A +PA IG +L+ ++ Sbjct: 232 GFIGGQTAPEGKRMGHAGAIISGGKGTAAEKIKTLRANGIEVAETPAIIGETLIRVIKE 290 >gi|304394257|ref|ZP_07376180.1| succinyl-CoA ligase, alpha subunit [Ahrensia sp. R2A130] gi|303293697|gb|EFL88074.1| succinyl-CoA ligase, alpha subunit [Ahrensia sp. R2A130] Length = 300 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 220/299 (73%), Positives = 259/299 (86%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-GGNVNVPVF 59 MSIL+DKNTK++VQGLTGK GTFHTEQA+ Y TQ+V G HPKKG T W +P+F Sbjct: 1 MSILIDKNTKIIVQGLTGKTGTFHTEQALAYHGTQMVAGTHPKKGGTDWESADGAKLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TTVA+AKE+T ANASVIYVPP+G AI E+I+AEIPLIV ITEG+PVLDMVRVK +L+K Sbjct: 61 TTVADAKEKTGANASVIYVPPAGCAAAIEEAIDAEIPLIVAITEGVPVLDMVRVKEKLDK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPG++TPD CKIGIMPGSIF+ G+VGI+SRSGTLTYEAVFQT+ GLGQ+T Sbjct: 121 SKSRLIGPNCPGVMTPDECKIGIMPGSIFKDGNVGIVSRSGTLTYEAVFQTTNAGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFID+LE+FLADE T+SI+M+GEIGGSAEE+AAQFL DEAK+GR KP Sbjct: 181 AVGIGGDPVKGTEFIDMLEMFLADEETKSIIMIGEIGGSAEEDAAQFLADEAKKGRMKPT 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG TAPPGRTMGHAGAV+SGGKG A KI AM+ AGI ++PSPA++G +L++LL Sbjct: 241 VGFIAGVTAPPGRTMGHAGAVVSGGKGDAPSKIAAMEAAGIRVSPSPAKLGETLLDLLK 299 >gi|302332852|gb|ADL23045.1| succinate--CoA ligase (ADP-forming) alpha subunit [Staphylococcus aureus subsp. aureus JKD6159] Length = 302 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 168/296 (56%), Positives = 221/296 (74%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+ +DKNTKV+VQG+TG FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MSVFIDKNTKVMVQGITGSTALFHTKQMLDY-GTKIVAGVTPGKGGQVVEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK T A SVIYVP A D+I+E+ +A++ +++CITE IPVLDMV+VK L+ Sbjct: 56 TVEEAKNETGATVSVIYVPALFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I +KG VG++SRSGTLTYEAV Q ++EG+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++K KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIKANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+ G+TAPPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+E Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNICGVKTAATPSEIGSTLIEA 287 >gi|169827110|ref|YP_001697268.1| succinyl-CoA synthetase subunit alpha [Lysinibacillus sphaericus C3-41] gi|168991598|gb|ACA39138.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Lysinibacillus sphaericus C3-41] Length = 300 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 169/299 (56%), Positives = 221/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++ ++K+TKV+VQG+TG+ FHT+Q + Y T++V G+ P KG G VPVF Sbjct: 1 MAVFINKDTKVIVQGITGETALFHTKQMLEY-GTKIVAGVTPGKGGLEIEG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A SVIYVP A DAI+E+++AE+ L +CITE IPVLDMV+VK +E Sbjct: 56 TVAEAVAATGATTSVIYVPAPFAADAILEAVDAELELTICITEHIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++T D CKIGIMPG I KG VG++SRSGTLTYEAV Q +Q G+GQ+TA Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLTQAGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+ F D T ++VM+GEIGG+AEEEAA +++ KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLDAFNNDPETYAVVMIGEIGGTAEEEAAAWIQANM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAPPG+ MGHAGA+ISGGKG A +KI AM AGI +A +P+ IG +L++++ Sbjct: 232 GFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKAMNAAGIEVAETPSVIGETLIKVIKE 290 >gi|115803428|ref|XP_786544.2| PREDICTED: similar to succinyl-CoA synthetase alpha subunit [Strongylocentrotus purpuratus] gi|115976687|ref|XP_001181612.1| PREDICTED: similar to succinyl-CoA synthetase alpha subunit [Strongylocentrotus purpuratus] Length = 326 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 170/297 (57%), Positives = 219/297 (73%), Gaps = 6/297 (2%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 ++K TKV+ QG+TGK G FHT QAI Y T +VGG+ P K + +PVF + E Sbjct: 32 INKTTKVICQGITGKQGAFHTTQAIEY-GTNMVGGVTPGKSGQV----SCGLPVFDSCHE 86 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSR 123 AK +T +ASVIYVP A AI+E+I+AEI L+VCITEGIP DMV+VK RL +S +R Sbjct: 87 AKAKTGCDASVIYVPAPFAAPAIMEAIDAEIGLVVCITEGIPQQDMVKVKHRLSRQSKTR 146 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPNCPGI+ P +CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQ+ VGI Sbjct: 147 LVGPNCPGIIAPGACKIGIMPGHIHKEGKIGIVSRSGTLTYEAVAQTTAVGLGQTLCVGI 206 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDP GT F+D LE+FL D ATE IV++GEIGG AEE+AA+FLK KP+ F+ Sbjct: 207 GGDPFNGTNFVDCLEIFLNDPATEGIVLIGEIGGGAEEKAAEFLKQHNSGPDAKPVAAFI 266 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 AG TAPPGR MGHAGA+ISGGKGGA +KI A+K+AG+ + SPA++G ++++ + + Sbjct: 267 AGLTAPPGRRMGHAGAIISGGKGGATEKIQALKDAGVVVTMSPAQMGTTILKEMEKI 323 >gi|78188444|ref|YP_378782.1| succinyl-CoA ligase, alpha subunit [Chlorobium chlorochromatii CaD3] gi|78170643|gb|ABB27739.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Chlorobium chlorochromatii CaD3] Length = 299 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 173/304 (56%), Positives = 231/304 (75%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T++LVQG+TG GTFHT Q + Y T VV G+ P KG T + G + + Sbjct: 1 MSVLVNKDTRLLVQGITGGEGTFHTSQILEY-GTNVVAGVTPGKGGTLYHGNDKDKFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV +A E+T AN SVI+VP A DAI+E+ +A + +I+CITEGIPV DM++ A Sbjct: 60 VPVFNTVRDAVEKTEANVSVIFVPAPFAADAIMEAADAGLKVIICITEGIPVNDMMKAYA 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + L+GPNCPG++TP K+GIMPG I +KG++G++SRSGTLTYEAV Q +Q GL Sbjct: 120 FVQQKGAILVGPNCPGVITPGEAKVGIMPGFIHKKGTIGVVSRSGTLTYEAVHQLTQVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT FID ++LF AD+ TE +VM+GEIGGSAEEEAA ++K+ Sbjct: 180 GQSTCIGIGGDPIIGTRFIDAVKLFAADDETEGLVMIGEIGGSAEEEAAAYIKEN----F 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG A +KI AM+EAGI + SPA IG ++++ Sbjct: 236 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAVEKIRAMEEAGIHVVESPADIGEAMIK 295 Query: 296 LLGS 299 LG Sbjct: 296 ALGR 299 >gi|114571357|ref|YP_758037.1| succinyl-CoA synthetase subunit alpha [Maricaulis maris MCS10] gi|114341819|gb|ABI67099.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Maricaulis maris MCS10] Length = 302 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 228/301 (75%), Positives = 265/301 (88%), Gaps = 3/301 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN---VP 57 MSI+VDKNTKV+VQGLTGK GTFHTEQA+ Y TQ+V G+HPKKG W+ G +P Sbjct: 1 MSIIVDKNTKVIVQGLTGKTGTFHTEQALEYYGTQMVAGVHPKKGGETWSAGMDGAASLP 60 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 +F +V EAKE T A+ASVIYVPP+GAG AIIE+I+AEIP IVCITEGIPV+DMV+VK RL Sbjct: 61 IFASVGEAKEATGADASVIYVPPAGAGAAIIEAIDAEIPFIVCITEGIPVMDMVKVKDRL 120 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +KSSS L+GPNCPGILTP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQTSQ GLGQ Sbjct: 121 DKSSSMLLGPNCPGILTPEECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTSQVGLGQ 180 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 +TAVGIGGDPVKGTEFIDVLE FLAD+ T+SI+M+GEIGGSAEE+AAQFL DEAK+GR K Sbjct: 181 TTAVGIGGDPVKGTEFIDVLEKFLADDETKSIIMIGEIGGSAEEDAAQFLADEAKKGRSK 240 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P VGF+AG+TAPPGRTMGHAGA++SGGKGGAEDKI AM+ AGI ++PSPAR+G +L ELL Sbjct: 241 PTVGFIAGRTAPPGRTMGHAGAIVSGGKGGAEDKIAAMEAAGIKVSPSPARLGTTLAELL 300 Query: 298 G 298 Sbjct: 301 K 301 >gi|217978643|ref|YP_002362790.1| succinyl-CoA synthetase, alpha subunit [Methylocella silvestris BL2] gi|217504019|gb|ACK51428.1| succinyl-CoA synthetase, alpha subunit [Methylocella silvestris BL2] Length = 294 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 209/297 (70%), Positives = 246/297 (82%), Gaps = 5/297 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ K+TK++ QG TGK GTFH+EQAI Y + +VGG P KG + G +PVF Sbjct: 1 MSILLKKDTKIICQGFTGKNGTFHSEQAIAY-GSLMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA++ T A ASVIYVPP GA DAI E+I+AEIPLIVCITEGIPV DMVRVK L S Sbjct: 56 TVDEARDATGAEASVIYVPPPGAADAICEAIDAEIPLIVCITEGIPVEDMVRVKRALCGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++T KIGIMPG+IF+KGSVGI+SRSGTLTYEAVFQT++E LGQ+TA Sbjct: 116 KSTLIGPNCPGVMTAGESKIGIMPGNIFQKGSVGIVSRSGTLTYEAVFQTTRENLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKG EFID+L+LFLAD+ T+SI+M+GEIGG AEE+AAQFLKD AKRGR KP V Sbjct: 176 VGIGGDPVKGAEFIDILDLFLADDDTKSIIMIGEIGGGAEEDAAQFLKDAAKRGRMKPTV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ AGI ++PSPAR+G +L E+L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMESAGIRVSPSPARLGATLAEVL 292 >gi|156367357|ref|XP_001627384.1| predicted protein [Nematostella vectensis] gi|156214292|gb|EDO35284.1| predicted protein [Nematostella vectensis] Length = 331 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 176/294 (59%), Positives = 217/294 (73%), Gaps = 6/294 (2%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 ++K+TKV+ QG TGK GTFH++Q+I Y T +VGG+ P KG G +PVF TV E Sbjct: 32 INKDTKVICQGFTGKQGTFHSQQSIEY-GTNMVGGVSPGKGGKTHLG----LPVFDTVQE 86 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSR 123 AK T A+A+VIYVPP A DAI E+IEAEI LIVCITEGIP DMV+VK RL E+ SR Sbjct: 87 AKNETGADATVIYVPPPYAADAIHEAIEAEIGLIVCITEGIPQQDMVKVKRRLTEQGKSR 146 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 LIGPNCPGI+ P CKIGIMPG I G +GI+SRSGTLTYEAV QTS LGQS VGI Sbjct: 147 LIGPNCPGIIKPGECKIGIMPGHIHHPGVIGIVSRSGTLTYEAVHQTSHVNLGQSLCVGI 206 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDP GT F+D LE+FL D T+ IV++GEIGG AEE+AA++L + KP+V F+ Sbjct: 207 GGDPFNGTNFVDCLEVFLNDPGTKGIVLIGEIGGGAEEKAAEYLAENNTGDNAKPVVSFI 266 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 AG TAPPGR MGHAGA+I+GG+GGAE KI A+K+AG+ + SPA++G + ++ Sbjct: 267 AGVTAPPGRRMGHAGAIIAGGRGGAEHKIQALKDAGVNVTMSPAQMGSMMRKVF 320 >gi|94970900|ref|YP_592948.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Candidatus Koribacter versatilis Ellin345] gi|94552950|gb|ABF42874.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Candidatus Koribacter versatilis Ellin345] Length = 293 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 177/298 (59%), Positives = 225/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNT+++VQGLTG+ GTFH + A T+VVGG+ P KG T G P++ Sbjct: 1 MSILVDKNTRLIVQGLTGREGTFHAK-ACADYGTKVVGGVTPGKGGTTHEG----WPIYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A ++T AN SVI+VPP A DAI+E+++AE+PL+VCITEGIP DMV+V ++ Sbjct: 56 TVSDAVQQTGANVSVIFVPPPFAADAIMEAVDAELPLVVCITEGIPAQDMVKVWDYMQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI++P KIGIMP I ++G VGI+SRSGTLTYEAV Q + G+GQSTA Sbjct: 116 KSRLIGPNCPGIISPGKAKIGIMPARIHKQGHVGIVSRSGTLTYEAVHQLTVRGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+LF D TE+I+M+GEIGG+AEE AA+F+K KKP+V Sbjct: 176 IGIGGDPIIGTNFIDALDLFNKDPETEAIIMIGEIGGNAEENAAEFVKANV----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+ISGGKG A +K AM+ AGI I SPA +G +LV+ G Sbjct: 232 GFIAGQTAPPGRRMGHAGAIISGGKGTAAEKFKAMEAAGIHIVKSPALLGETLVQATG 289 >gi|221055894|ref|XP_002259085.1| succinyl-coa synthetase alpha subunit [Plasmodium knowlesi strain H] gi|193809156|emb|CAQ39858.1| succinyl-coa synthetase alpha subunit, putative [Plasmodium knowlesi strain H] Length = 327 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 167/304 (54%), Positives = 220/304 (72%), Gaps = 7/304 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--GNVNVPVFT 60 + VDKNT V+ QG+TGK GTFHT +A+ Y T++VGG++P+K T W +PVF Sbjct: 24 VFVDKNTTVICQGITGKQGTFHTTEAMKY-GTKMVGGVNPRKKGTMWESLDKKYTLPVFG 82 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 + EAKE+T ASVIYVPP A +AIIE++EAEIPL+VCITEGI DMV VK L+ Sbjct: 83 STMEAKEKTNCYASVIYVPPEHAKNAIIEAVEAEIPLVVCITEGICQHDMVEVKHCLKMS 142 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++LIGPNCPG++ P CKIGIMP I +KG VGI+SRSGTLTYE V QT++ GLGQST Sbjct: 143 KKTKLIGPNCPGVIKPGECKIGIMPSHIHKKGCVGIVSRSGTLTYEGVNQTTKVGLGQST 202 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK---RGRK 236 +GIGGDP GT FID ++LFL D+ T+ I+++GEIGG AEE+ A++L + +K Sbjct: 203 CIGIGGDPFHGTNFIDCIKLFLEDDETKCILLIGEIGGDAEEQVAEWLIQNNVDDGKKKK 262 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+ FVAGK APPG+ MGHAGA+ISGGKG A++KI A++ AG+ +PA +G+ + + Sbjct: 263 KPVFAFVAGKCAPPGKRMGHAGALISGGKGTADEKIKALEAAGVHTIMNPALMGQEIYSI 322 Query: 297 LGSL 300 + L Sbjct: 323 MKDL 326 >gi|145513372|ref|XP_001442597.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124409950|emb|CAK75200.1| unnamed protein product [Paramecium tetraurelia] Length = 337 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 170/298 (57%), Positives = 219/298 (73%), Gaps = 8/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + V+K+TKV+ QG+TG GTF TEQA+ Y T++VGG+ PKK + G +PVF Sbjct: 43 VWVNKHTKVICQGITGNQGTFQTEQALNY-FTKMVGGVSPKKAGSTHLG----LPVFKDC 97 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSS 121 EAK T +ASVIYVPP A AIIE+IEA+I L+V IT+GIP DM++VK L +S Sbjct: 98 KEAKSATGCDASVIYVPPPTAASAIIEAIEAQIGLVVVITDGIPQHDMIKVKHALRSQSV 157 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +R+IGPNCPGI+ P+ CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQST V Sbjct: 158 TRVIGPNCPGIIKPNECKIGIMPGYIHQNGKIGIVSRSGTLTYEAVDQTTRAGLGQSTVV 217 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FIDVLE F+ D TE IVM+GEIGG EE AA ++K + KP+VG Sbjct: 218 GIGGDPFNGTNFIDVLERFMVDPETEGIVMIGEIGGENEEMAADWIKKNN--PKNKPVVG 275 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPP R MGHAGA++S GKG A +KI A+++AGI + SPA+IG++++E++ Sbjct: 276 FIAGITAPPERRMGHAGAIVSKGKGSAPEKIRALEQAGIRVVKSPAQIGKTMLEVMKE 333 >gi|226941328|ref|YP_002796402.1| succinyl-CoA synthetase subunit alpha [Laribacter hongkongensis HLHK9] gi|226716255|gb|ACO75393.1| SucD [Laribacter hongkongensis HLHK9] Length = 294 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+T+VLVQG TGK GTFH+EQA+ Y T+VVGG+ P KG + G +PVF Sbjct: 1 MSVLVNKDTRVLVQGFTGKNGTFHSEQALAY-GTKVVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A T A+ASVIYVP D++IE+++A + LIV ITEG+P LDM++VK +E+S Sbjct: 56 TMKDAVRETRADASVIYVPAPFVLDSVIEAVDAGVKLIVTITEGVPTLDMLKVKRYVEES 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GARLIGPNCPGIITPGECKIGIMPGHIHKPGRIGIVSRSGTLTYEAVAQTTVLGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID L+LF D T++IVM+GEIGG+AEEEAA+F K KPIV Sbjct: 176 IGIGGDPIPGTSHIDALKLFQDDPDTDAIVMIGEIGGTAEEEAAEFAKSYV----TKPIV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA IG +++ LL Sbjct: 232 GYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIRYTRSPAEIGTTMLALLKE 290 >gi|298385587|ref|ZP_06995145.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Bacteroides sp. 1_1_14] gi|298261728|gb|EFI04594.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Bacteroides sp. 1_1_14] Length = 286 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 150/295 (50%), Positives = 213/295 (72%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+++VQG+TG+ G FH ++ Y T VVGG P KG T G +PVF Sbjct: 1 MSILIDKSTRLIVQGITGRDGLFHAKKMNEY-GTNVVGGTSPGKGGTEVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA E+T AN S+I+VP A DAI+E+ +A I LIVCI EGIP LD+++ E+ Sbjct: 56 TMYEAVEQTQANTSIIFVPARFAADAIMEAADAGIRLIVCIAEGIPTLDVIKAYRFAEQR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPG+++P +GI+PG +F+KG+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAMLVGPNCPGLISPGESMVGILPGQVFQKGNVGVISRSGTLTYEIVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+ +LE+F D T++IV++GEIGG+AEE+AA++++ KP+V Sbjct: 176 IGIGGDPVVGLHFLKLLEMFQNDPETKAIVLIGEIGGNAEEQAAEYIRSHV----NKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG++APPG+ MGHAGA++SGG G A+DKI A++ AGI +A P+ I + L Sbjct: 232 AFIAGQSAPPGKQMGHAGAIVSGGSGSAKDKIEALEAAGIRVAQEPSDIPKLLKR 286 >gi|149177236|ref|ZP_01855842.1| putative succinyl-CoA synthetase alpha subunit [Planctomyces maris DSM 8797] gi|148843950|gb|EDL58307.1| putative succinyl-CoA synthetase alpha subunit [Planctomyces maris DSM 8797] Length = 292 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 168/299 (56%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV + T+V+ QG+TGK+G FH++Q Y T +VGG+ P KG T G PVF Sbjct: 1 MSILVTEKTRVICQGITGKSGLFHSQQCREY-GTPLVGGVTPGKGGTEVDG----FPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T AN S+++VPP G+AI+E+ +A + LI+ ITEG+PV DMVRV L+ Sbjct: 56 TVEEAVEKTGANTSLVFVPPPFCGEAIMEAADAGMELIIAITEGVPVFDMVRVMEYLKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TP KIGIMPG I GSVG++S+SGTLTYEA +Q GLGQSTA Sbjct: 116 KSRLIGPNCPGVITPGIAKIGIMPGYIHTPGSVGLISKSGTLTYEAAWQLGNIGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FID+LELF D ATESI+++GEIGG+AE EAA+++K+ KP+ Sbjct: 176 VGIGGDPIIGTTFIDLLELFENDPATESIMLIGEIGGTAEIEAAEYIKEHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AGKTAPPG+ MGHAGA+ISGG G A++KI A++ AG+ +A SPA +G ++ + + Sbjct: 232 GFIAGKTAPPGKRMGHAGAIISGGSGTADEKIAALEAAGVVVAESPADMGTAMKRAIEA 290 >gi|302851434|ref|XP_002957241.1| succinate-coa ligase alpha chain, succinyl-CoA synthetase mitochondrial precursor [Volvox carteri f. nagariensis] gi|300257491|gb|EFJ41739.1| succinate-coa ligase alpha chain, succinyl-CoA synthetase mitochondrial precursor [Volvox carteri f. nagariensis] Length = 328 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 183/297 (61%), Positives = 228/297 (76%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNTKV+ QG+TGK GTFHTEQAI Y TQ+VGG+ PKKG + G +PVF + Sbjct: 34 AVFVDKNTKVICQGITGKNGTFHTEQAIAY-GTQMVGGVTPKKGGSTHLG----LPVFNS 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAK T +ASVIYVPP A AI+E++EAE+ L+VCITEGIP DMV+VK L E+S Sbjct: 89 VKEAKSATGCHASVIYVPPPFAARAILEAVEAELDLVVCITEGIPQHDMVKVKKTLQEQS 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I G +GI+SRSGTLTYEAVFQT+ +GLGQST Sbjct: 149 KTRLIGPNCPGIIKPGECKIGIMPGYIHTPGKIGIVSRSGTLTYEAVFQTTNQGLGQSTV 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE I+M+GEIGG+AEEEAA+F+K G +KP+V Sbjct: 209 VGIGGDPFNGTNFVDCLERFVKDPQTEGIIMIGEIGGTAEEEAAEFIKA---SGTQKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKG A DKI A++ AG+ + SPA++G +++ ++ Sbjct: 266 SFIAGLTAPPGRRMGHAGAIISGGKGRASDKIEALESAGVTVTRSPAQMGSTMMRVM 322 >gi|114707320|ref|ZP_01440217.1| succinyl-CoA synthetase alpha subunit [Fulvimarina pelagi HTCC2506] gi|114537201|gb|EAU40328.1| succinyl-CoA synthetase alpha subunit [Fulvimarina pelagi HTCC2506] Length = 306 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 227/305 (74%), Positives = 266/305 (87%), Gaps = 7/305 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN------- 53 MSILV+KNTK++VQGLTGK GTFHTEQA+ Y TQ+V GIHPKKG WT G Sbjct: 1 MSILVEKNTKIIVQGLTGKTGTFHTEQALAYHGTQMVAGIHPKKGGETWTAGEGAKDAAG 60 Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV 113 +P+FT+VAEAK++T A ASVIYVPP+GA AI E+IEA I LI CITEGIPV DMV+V Sbjct: 61 TELPIFTSVAEAKDKTGATASVIYVPPAGAAAAIEEAIEAGIDLITCITEGIPVSDMVKV 120 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 KA+LEKS SRLIGPNCPG+LTP+ CKIGIMPG+IF KGSVG++SRSGTLTYEAVFQT+ E Sbjct: 121 KAKLEKSKSRLIGPNCPGVLTPEECKIGIMPGNIFSKGSVGVVSRSGTLTYEAVFQTTNE 180 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 GLGQ+TAVGIGGDPVKGTEFIDVLE+FLAD+AT+SI+M+GEIGGSAEE+AAQFL DEAK+ Sbjct: 181 GLGQTTAVGIGGDPVKGTEFIDVLEMFLADDATQSIIMIGEIGGSAEEDAAQFLADEAKK 240 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 GR KP VGF+AG+TAP GRTMGHAGAV+SGGKGGAEDKI AM++AGI ++PSPA++G++L Sbjct: 241 GRSKPTVGFIAGRTAPKGRTMGHAGAVVSGGKGGAEDKIEAMEKAGIRVSPSPAQLGKTL 300 Query: 294 VELLG 298 VELL Sbjct: 301 VELLK 305 >gi|58396343|ref|XP_321835.2| AGAP001312-PA [Anopheles gambiae str. PEST] gi|55234034|gb|EAA01194.2| AGAP001312-PA [Anopheles gambiae str. PEST] Length = 328 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 174/300 (58%), Positives = 231/300 (77%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ N+KV+ QG TGK GTFH++QAI Y T++VGG+ P KG ++ PVF T Sbjct: 31 NLKLNSNSKVICQGFTGKQGTFHSQQAIEY-GTKLVGGVSPGKGGRTH----LDRPVFNT 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+ T A ASVIYVPP GA AI+E+IEAE+PLIVCITEG+P DMV+VK L + Sbjct: 86 VAEAKKATGAEASVIYVPPPGAAKAIMEAIEAEMPLIVCITEGVPQHDMVKVKHALLAQD 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPDTKGIILIGEIGGVAEEKAADYLMQYNQGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA+DKINA+++AG+ + SPA++G+ L++ + L Sbjct: 266 SFIAGLSAPPGRRMGHAGAIISGGKGGAQDKINALEKAGVIVTRSPAQMGKELIKEMKRL 325 >gi|170769497|ref|ZP_02903950.1| succinate-CoA ligase, alpha subunit [Escherichia albertii TW07627] gi|170121554|gb|EDS90485.1| succinate-CoA ligase, alpha subunit [Escherichia albertii TW07627] Length = 290 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 167/299 (55%), Positives = 218/299 (72%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+VLVQG+TGK GTFHTEQAI Y TQ+VGG+ P KG ++ PVF Sbjct: 1 MSVLINKHTRVLVQGITGKNGTFHTEQAIAY-GTQIVGGVTPGKGGQRH----LDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 ++ EA +T A+ASVIYVP D+++E++E+ + LIV ITEG+P LDMV+V+ L+ Sbjct: 56 SMKEAMRQTEADASVIYVPAPFVLDSVVEAVESGVKLIVVITEGVPTLDMVKVRRLLDCH 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPGI+TP CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PDVRLIGPNCPGIITPGECKIGIMPGEIHRPGRIGIVSRSGTLTYEAVAQTTALGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FID L LF D T++++M+GEIGG+AEE AA+F+ E KP+ Sbjct: 176 CIGIGGDPVPGTNFIDALRLFENDPQTDAVIMIGEIGGNAEERAAEFIHHEM----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VG++AG TAP G+ MGHAGA+ISGG G AE+K A +AG+ +PA +G +L ++ Sbjct: 232 VGYIAGVTAPKGKRMGHAGAIISGGSGSAEEKFRAFDKAGMAWTRNPALLGDTLWNVIK 290 >gi|326919639|ref|XP_003206087.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial-like, partial [Meleagris gallopavo] Length = 337 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 172/299 (57%), Positives = 226/299 (75%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH++QA+ Y T +VGG+ P KG G +PVF + Sbjct: 40 NLYINNSTKVICQGFTGKQGTFHSQQALEY-GTNLVGGVSPGKGGKTHLG----LPVFNS 94 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A+A+VIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL ++ Sbjct: 95 VKEAKEQTGASATVIYVPPPFAAAAINEAIDAEMPLVVCITEGIPQQDMVRVKHRLLRQN 154 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 155 KTRLVGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSFC 214 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D TE I+++GEIGG+AEE+AA FLK+ KP+V Sbjct: 215 VGIGGDPFNGTNFIDCLDVFLKDPHTEGIILIGEIGGNAEEDAAAFLKENNSGPNAKPVV 274 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 275 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTIYKEFEK 333 >gi|218551371|ref|YP_002385163.1| succinyl-CoA synthetase subunit alpha [Escherichia fergusonii ATCC 35469] gi|218358913|emb|CAQ91574.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Escherichia fergusonii ATCC 35469] Length = 290 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 168/299 (56%), Positives = 219/299 (73%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+VLVQG+TGK GTFHTEQAI Y TQ+VGG+ P KG +++ PVF Sbjct: 1 MSVLINKHTRVLVQGITGKNGTFHTEQAIAY-GTQIVGGVTPGKGGQ----LHLDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 ++ EA +T A+ASVIYVP D+++E+IE+ + LIV ITEG+P LDMV+V+ L+ Sbjct: 56 SMKEAMRQTEADASVIYVPAPFVLDSVVEAIESGVKLIVVITEGVPTLDMVKVRRLLDCH 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPGI+TP CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PDVRLIGPNCPGIITPGECKIGIMPGEIHRPGRIGIVSRSGTLTYEAVAQTTALGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FID L LF D T++++M+GEIGG+AEE AA+F++ E K + Sbjct: 176 CIGIGGDPVPGTNFIDALRLFENDPQTDAVIMIGEIGGNAEERAAEFIRHEM----NKTV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VG++AG TAP G+ MGHAGA+ISGG G AEDK A +AG+ +PA +G +L ++ Sbjct: 232 VGYIAGVTAPKGKRMGHAGAIISGGSGSAEDKFRAFDKAGMAWTRNPALLGETLWNVIK 290 >gi|330994297|ref|ZP_08318225.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Gluconacetobacter sp. SXCC-1] gi|329758764|gb|EGG75280.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Gluconacetobacter sp. SXCC-1] Length = 290 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 196/298 (65%), Positives = 232/298 (77%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+ QG TG GTFHTEQAI Y T++VGG+ P KG + G +PVF Sbjct: 1 MSILVNKSTKVITQGFTGAQGTFHTEQAIAY-GTRMVGGVTPGKGGSEHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A+E T A+ASVIYVPP+GA DAI+E+I AEIPLIVCITEGIPV DMVRV+A LE+S Sbjct: 56 TVCQAREATGADASVIYVPPAGAADAILEAIAAEIPLIVCITEGIPVQDMVRVRAALERS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPGI+TPD CKIGIMPG I R+G VGI+SRSGTLTYEAV QTS G GQST Sbjct: 116 GSLLIGPNCPGIITPDECKIGIMPGPIHRRGHVGIVSRSGTLTYEAVAQTSAIGQGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKG +F DVLE +AD T SIVM+GEIGG++E E A+ ++ G +KP+V Sbjct: 176 VGIGGDPVKGMDFTDVLERMIADPDTHSIVMIGEIGGTSEIEGAELIRA---SGTRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAPPGR MGHAGAVI+GG A KI AM+EAGI I+ SPA +G +L +LG Sbjct: 233 GFIAGATAPPGRRMGHAGAVITGGHETASAKIEAMREAGIHISHSPAELGVTLARVLG 290 >gi|255660003|ref|ZP_05405412.1| succinyl-CoA synthetase subunit alpha [Mitsuokella multacida DSM 20544] gi|260847756|gb|EEX67763.1| succinyl-CoA synthetase subunit alpha [Mitsuokella multacida DSM 20544] Length = 301 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 169/299 (56%), Positives = 220/299 (73%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M ILV K+TKV+VQG+TGKA FHT+Q I Y T+VVGG+ P KG G VPVF Sbjct: 1 MGILVHKDTKVIVQGITGKAAAFHTQQMIDY-GTKVVGGVTPGKGGQIACG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP A D+I+E+++A++ ++VCI+E IPV DM++V+ +E Sbjct: 56 TVREAVEATGATASVIYVPARFAADSIMEAVDADLDVVVCISEHIPVQDMIKVRRYMEGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPGILT D CK+GI+PG I RKG VG++SRSGTLTYEA FQ + G+GQ+TA Sbjct: 116 KTHLIGPNCPGILTADECKLGIIPGYIHRKGHVGVISRSGTLTYEATFQLTAAGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPVKGT+FID L+LF D T +++M+GEIGG+AEE+AA+++ KP+ Sbjct: 176 IGIGGDPVKGTDFIDALKLFKEDPETLAVLMIGEIGGTAEEDAAKWIAANM---PDKPVA 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+ APPG+ MGHAGA+ISGGKG A DKI A+ E GI +A + A IG ++V+ L Sbjct: 233 AFIAGRQAPPGKRMGHAGAIISGGKGTAADKIKALHEVGIEVADTVADIGETVVKTLKE 291 >gi|32476525|ref|NP_869519.1| succinyl-CoA synthetase alpha subunit [Rhodopirellula baltica SH 1] gi|32447071|emb|CAD76880.1| putative succinyl-CoA synthetase alpha subunit [Rhodopirellula baltica SH 1] gi|327539988|gb|EGF26585.1| succinyl-CoA synthetase alpha subunit [Rhodopirellula baltica WH47] Length = 290 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 169/299 (56%), Positives = 225/299 (75%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNTKV+ QG+TG AG FH+ Y TQ+VGG+ P KG G +PVF Sbjct: 1 MSILVDKNTKVICQGITGNAGKFHSLGCRDY-GTQMVGGVTPGKGGQDVEG----IPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T A+A++I+VPP DAI+E+++A I +I ITEG+PV+DMVRV +++ S Sbjct: 56 TVEEAVQKTGADATMIFVPPPFTADAILEAVDAGIRVIAAITEGVPVIDMVRVYEKVKAS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAV+QTS LGQST Sbjct: 116 GSTLIGPNCPGLITPGECKIGIMPGYIHNPGKVGVMSRSGTLTYEAVWQTSSLKLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ GT +ID+ +++ D+ TE+I+M+GEIGGSAEEEAA F+K+ KP+ Sbjct: 176 VGLGGDPIVGTNYIDLFKMYQEDDQTEAILMIGEIGGSAEEEAAAFVKEHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAPPG+ MGHAGA+ISGGKG AE+K+ A+++AGI +APSPA +G ++V+ + Sbjct: 232 AFIAGRTAPPGKRMGHAGAIISGGKGTAEEKVAALEDAGIVVAPSPAEMGEAVVKAMSK 290 >gi|148266358|ref|YP_001233064.1| succinyl-CoA synthetase, alpha subunit [Geobacter uraniireducens Rf4] gi|146399858|gb|ABQ28491.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Geobacter uraniireducens Rf4] Length = 291 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 167/298 (56%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV K TKV+ QG+TG G FH + A Y TQ+VGG+ P KG T G PVF Sbjct: 1 MAILVHKATKVITQGITGATGLFHAQGAREY-GTQMVGGVTPGKGGTNIDG----FPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA +T A ASVIYVPP A D+I+E+++A I ++ CITEGIPVLDMV+VK ++ Sbjct: 56 TVAEAVAKTGATASVIYVPPPFAADSIMEAVDAGIEMVCCITEGIPVLDMVKVKQYMQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I + G VG++SRSGTLTYEAV+Q + GLGQST Sbjct: 116 KTRLIGPNCPGVITPGQCKIGIMPGYIHKPGKVGVVSRSGTLTYEAVWQLTGYGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT +D L++F D TE+++M+GEIGG+AEEEAA F++D KP+ Sbjct: 176 VGIGGDPVNGTSHLDCLKMFEEDPETEAVIMIGEIGGNAEEEAAYFVRDHM----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG+TAPPG+ MGHAGA+ISGGKG A +K+ ++E GI +A SPA + ++L+++ Sbjct: 232 AYIAGRTAPPGKRMGHAGAIISGGKGTAAEKVAVLEECGISVAASPAEMAQALLKIYK 289 >gi|159469921|ref|XP_001693108.1| succinyl-coa ligase alpha chain [Chlamydomonas reinhardtii] gi|159469923|ref|XP_001693109.1| succinyl-CoA ligase [Chlamydomonas reinhardtii] gi|158277366|gb|EDP03134.1| succinyl-coa ligase alpha chain [Chlamydomonas reinhardtii] gi|158277367|gb|EDP03135.1| succinyl-CoA ligase [Chlamydomonas reinhardtii] Length = 329 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 186/299 (62%), Positives = 231/299 (77%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNTKV+ QGLTGK GTFHTEQAI Y TQ+VGG+ PKKG T G +PVF T Sbjct: 35 AVFVDKNTKVICQGLTGKNGTFHTEQAIAY-GTQMVGGVTPKKGGTSHLG----LPVFNT 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEAK T +A+VIYVPP A AI+E++EAE+ L+VCITEGIP DMVRVK ++ ++ Sbjct: 90 VAEAKAATGCHATVIYVPPPFAAKAILEAVEAELELVVCITEGIPQHDMVRVKKAMQGQT 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I G +GI+SRSGTLTYEAVFQT+ +GLGQST Sbjct: 150 KTRLIGPNCPGIIKPGECKIGIMPGYIHTPGKIGIVSRSGTLTYEAVFQTTNQGLGQSTV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE I+M+GEIGG+AEEEAA+F++ K G KKP+V Sbjct: 210 VGIGGDPFNGTNFVDCLERFVKDPQTEGIIMIGEIGGTAEEEAAEFIR---KSGTKKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+ISGGKG A DKI A++EAG+ + SPA++G +++ ++ Sbjct: 267 SFIAGLTAPPGRRMGHAGAIISGGKGTATDKIKALEEAGVTVTRSPAQMGVTMMRVMKE 325 >gi|320169175|gb|EFW46074.1| succinate-CoA ligase [Capsaspora owczarzaki ATCC 30864] Length = 318 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 174/290 (60%), Positives = 223/290 (76%), Gaps = 9/290 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L++K+TKV+ QG TGK GTFH+EQA+LY T++VGG+ P K G +PVF Sbjct: 25 NLLINKDTKVICQGFTGKQGTFHSEQALLY-GTKMVGGVSPAKAGQQHLG----LPVFKD 79 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 V +A + T A+A+VIYVPP A AI E+IEAEIPL VCITEGIP DMV+VK A L ++ Sbjct: 80 VKDAVKATGAHATVIYVPPPFAAGAIFEAIEAEIPLAVCITEGIPQQDMVKVKNALLSQN 139 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ PD CKIGIMPG I ++G++GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 140 KTRLVGPNCPGIIKPDECKIGIMPGHIHKRGNIGIVSRSGTLTYEAVAQTTAVGLGQSLC 199 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D L++FL D T+ I+++GEIGGSAEEEAA++LK+ KKP+V Sbjct: 200 VGIGGDPFNGTNFVDCLDIFLNDPETKGIILIGEIGGSAEEEAAEYLKNHKI---KKPVV 256 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 F+AG+TAPPGR MGHAGA+ISGGKGGA+ KI A+ AG+ + SPA++G Sbjct: 257 SFIAGRTAPPGRRMGHAGAIISGGKGGADAKIAALHSAGVTVVDSPAQMG 306 >gi|225713910|gb|ACO12801.1| Succinyl-CoA ligase subunit alpha, mitochondrial precursor [Lepeophtheirus salmonis] gi|290561819|gb|ADD38307.1| Succinyl-CoA ligase subunit alpha, mitochondrial [Lepeophtheirus salmonis] Length = 327 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 174/300 (58%), Positives = 230/300 (76%), Gaps = 6/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++++ K++KV+ QG TGK GTFH++QAI Y T +VGG+ PKK G +PVF Sbjct: 29 MNMMLTKDSKVICQGFTGKQGTFHSQQAIDY-GTNMVGGVSPKKAGQTHLG----LPVFG 83 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EK 119 +V EA ++T A+A+VIYVPP GA AI+E++EAEI LIVCITEGIP DMVRVK L ++ Sbjct: 84 SVKEAVQKTNADATVIYVPPPGAAAAILEAVEAEIGLIVCITEGIPQQDMVRVKDALIQQ 143 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT+Q GLGQ+ Sbjct: 144 SKSRLIGPNCPGIIAPNKCKIGIMPGHIHQEGCIGVVSRSGTLTYEAVHQTTQVGLGQTL 203 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP GT FID L++FL D T+ I+M+GEIGG+AEE+AA +L++ +KP+ Sbjct: 204 CIGIGGDPFNGTNFIDCLDIFLKDPKTKGIIMIGEIGGAAEEKAADYLQEHNSGANQKPV 263 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V F+AG TAPPGR MGHAGA+ISGGKG A+ KI A++ AG+ + SPA++G +LV+L+ Sbjct: 264 VSFIAGVTAPPGRRMGHAGAIISGGKGTAQTKIAALEAAGVAVTSSPAKMGTTLVQLMKE 323 >gi|134093622|ref|YP_001098697.1| succinyl-CoA synthetase subunit alpha [Herminiimonas arsenicoxydans] gi|133737525|emb|CAL60568.1| Succinyl-CoA ligase [ADP-forming] subunit alpha (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) [Herminiimonas arsenicoxydans] Length = 291 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 164/299 (54%), Positives = 214/299 (71%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT I Y V G++PKK + G VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCIEYANGKNCFVAGVNPKKPGESFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +VAEAK T A SVIYVPP A AI E+++A I L++CITEGIPV DM+R KAR+E Sbjct: 57 YASVAEAKAETGATVSVIYVPPPFAAAAIDEAVDAGIDLVICITEGIPVRDMIRTKARME 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + L+GPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEA Q ++ GLGQS Sbjct: 117 GKKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAAGQLAEFGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV G + ID+L +F D T++++MVGEIGG AEE A+++KD KKP Sbjct: 177 TVVGIGGDPVSGLKHIDILRMFNDDPDTDAVIMVGEIGGDAEETCARWIKDNM----KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG TAP G+ MGHAGA+ISGGKG A++K+ M+ GI + +PA +GR L +L Sbjct: 233 VVGFIAGVTAPEGKRMGHAGAIISGGKGTAQEKLAVMEACGIKVTRNPAEMGRLLKSVL 291 >gi|227886928|ref|ZP_04004733.1| succinyl-CoA synthetase alpha chain [Escherichia coli 83972] gi|227836069|gb|EEJ46535.1| succinyl-CoA synthetase alpha chain [Escherichia coli 83972] gi|307556210|gb|ADN48985.1| succinyl-CoA synthase, alpha subunit [Escherichia coli ABU 83972] Length = 290 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 167/299 (55%), Positives = 218/299 (72%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T+VLV G+TGK GTFHTEQAI Y TQ+VGG+ P KG ++ PVF Sbjct: 1 MSVLINKHTRVLVLGITGKNGTFHTEQAIAY-GTQIVGGVTPGKGGQRH----LDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 ++ EA +T A+ASVIYVP D+++E+IEA + L+V ITEG+P LDMV+V+ L+ Sbjct: 56 SMKEAMRQTEADASVIYVPAPFVLDSVVEAIEAGVKLVVVITEGVPTLDMVKVRRLLDCH 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++TP CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PDVRLIGPNCPGVITPGECKIGIMPGEIHRPGRIGIVSRSGTLTYEAVAQTTALGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FID L LF D T++++M+GEIGG+AEE AA+F++ E KP+ Sbjct: 176 CIGIGGDPVPGTNFIDALRLFENDPQTDAVIMIGEIGGNAEERAAEFIRHEM----NKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VG++AG TAP G+ MGHAGA+ISGG G AEDK A +AG+ +PA +G +L ++ Sbjct: 232 VGYIAGVTAPKGKRMGHAGAIISGGSGSAEDKFRAFDKAGMAWTRNPALLGETLWNVIK 290 >gi|145479775|ref|XP_001425910.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124392982|emb|CAK58512.1| unnamed protein product [Paramecium tetraurelia] Length = 312 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 170/298 (57%), Positives = 221/298 (74%), Gaps = 8/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + V+K+TKV+ QG+TG GTF TEQA+ Y T++VGG+ PKK + G +PVF Sbjct: 18 VWVNKHTKVICQGITGNQGTFQTEQALNY-FTKMVGGVSPKKAGSTHLG----LPVFKNC 72 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSS 121 EAK+ T +ASVIYVPP A AIIE+IEA+I L+V IT+GIP DM++VK L +S Sbjct: 73 QEAKQNTGCDASVIYVPPPTAASAIIEAIEAQIGLVVVITDGIPQHDMIKVKHALRSQSV 132 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +R+IGPNCPGI+ P+ CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQST V Sbjct: 133 TRVIGPNCPGIIKPNECKIGIMPGYIHQNGKIGIVSRSGTLTYEAVDQTTRAGLGQSTVV 192 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FIDVLE F+ D TE IVM+GEIGG EE AA+++K + KP+VG Sbjct: 193 GIGGDPFNGTNFIDVLERFMVDPETEGIVMIGEIGGENEEMAAEWIKQNN--PKNKPVVG 250 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPP R MGHAGA++S GKG A +KI A+++AGI + SPA+IG++++E++ Sbjct: 251 FIAGITAPPERRMGHAGAIVSKGKGSAPEKIRALEQAGIRVVKSPAQIGKTMLEVMKE 308 >gi|5822495|pdb|2SCU|A Chain A, A Detailed Description Of The Structure Of Succinyl-Coa Synthetase From Escherichia Coli gi|5822497|pdb|2SCU|D Chain D, A Detailed Description Of The Structure Of Succinyl-Coa Synthetase From Escherichia Coli gi|157880064|pdb|1SCU|A Chain A, The Crystal Structure Of Succinyl-Coa Synthetase From Escherichia Coli At 2.5 Angstroms Resolution gi|227343895|pdb|1SCU|D Chain D, The Crystal Structure Of Succinyl-Coa Synthetase From Escherichia Coli At 2.5 Angstroms Resolution Length = 288 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 171/297 (57%), Positives = 216/297 (72%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 SIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF T Sbjct: 1 SILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFNT 55 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 VREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST V Sbjct: 116 VRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+VG Sbjct: 176 GIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MG AGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 YIAGVTAPKGKRMGXAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 288 >gi|225465670|ref|XP_002271746.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296085314|emb|CBI29046.3| unnamed protein product [Vitis vinifera] Length = 329 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 180/298 (60%), Positives = 228/298 (76%), Gaps = 9/298 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG G +P+F T Sbjct: 34 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGMEHLG----LPIFNT 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMV+VKA L +S Sbjct: 89 VAEAKAETRANASVIYVPPPFAAAAIMEAVEAELDLVVCITEGIPQHDMVKVKAALNRQS 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G VGI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 149 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTC 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D ++ FLAD TE I+++GEIGG+AEE+AA +K+ G +KP+V Sbjct: 209 VGIGGDPFNGTNFVDCVKKFLADPQTEGIILIGEIGGTAEEDAAALIKE---SGTEKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA++SGGKG A+DKI +++ G + SPA+IG +++++ Sbjct: 266 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLRDVGATVVESPAKIGVAMLDVFK 323 >gi|325115637|emb|CBZ51192.1| 2-oxoglutarate dehydrogenase E1 component,related [Neospora caninum Liverpool] Length = 361 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 175/328 (53%), Positives = 222/328 (67%), Gaps = 34/328 (10%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW--TGGNVNVPVFT 60 + VDKNT+V+ QGLTGK G+FHTEQ + Y TQ VGG++P K + W + G ++PVF Sbjct: 33 VFVDKNTRVICQGLTGKQGSFHTEQCLAY-GTQFVGGVNPSKKGSTWQSSDGKFSLPVFG 91 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEK 119 +V EAKE T +AS+I+VPP A AI++ I EIPL VCITEGIP DMVRVK A L + Sbjct: 92 SVKEAKEATGCDASMIFVPPPFAAKAIMDCIAEEIPLAVCITEGIPQQDMVRVKQALLSQ 151 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRS-------------------- 159 + +RLIGPNCPGI+ P CKIGIMPG I KG + S Sbjct: 152 TKTRLIGPNCPGIIKPGECKIGIMPGYIHSKGKIASNDESITTAMLIWIGQRCGDRASAH 211 Query: 160 --------GTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 GTLTYEAV QT+Q GLGQST VGIGGDP GT FID LE F+ D T+ IV+ Sbjct: 212 SWLNEKKTGTLTYEAVNQTTQTGLGQSTCVGIGGDPFNGTNFIDCLERFVNDPETKGIVL 271 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDK 271 +GEIGGSAEEEAA +LK+ K +KP+V F+AG TAPPGR MGHAGA++SGGKG AE K Sbjct: 272 IGEIGGSAEEEAAAWLKEHNKE--QKPVVSFIAGLTAPPGRRMGHAGAIVSGGKGTAEGK 329 Query: 272 INAMKEAGICIAPSPARIGRSLVELLGS 299 I A+++AG+ + +PA +G+ ++E++ + Sbjct: 330 IAALEDAGVHVVRNPAAMGQKMLEVMQA 357 >gi|307103074|gb|EFN51338.1| hypothetical protein CHLNCDRAFT_141133 [Chlorella variabilis] Length = 330 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 186/299 (62%), Positives = 227/299 (75%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK+TKV+VQG TGK GTFH+EQAI Y TQVVGG++PKKG T G +PVF + Sbjct: 36 AVFVDKDTKVIVQGFTGKNGTFHSEQAIQY-GTQVVGGVNPKKGGTTHLG----LPVFAS 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE T +A+ IYVPP GA AI+E++EAE+ L+VCITE IP DMVRVK L E+S Sbjct: 91 VREAKEATGCHATAIYVPPPGAAKAILEAVEAELDLVVCITEAIPQHDMVRVKKVLSEQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I G +GI+SRSGTLTYEAVFQT+ EGLGQST Sbjct: 151 KTRLIGPNCPGIIKPGECKIGIMPGYIHTPGKIGIVSRSGTLTYEAVFQTTNEGLGQSTV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE I+M+GEIGGSAEEEAA+FL G KP+V Sbjct: 211 VGIGGDPFNGTNFVDCLERFVLDPQTEGIIMIGEIGGSAEEEAAEFL---IASGTTKPVV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+ISGGKG A+DKI A++ AG+ + SPA++G ++ ++ Sbjct: 268 SFIAGLTAPPGRRMGHAGAIISGGKGTAQDKIKALEAAGVTVTNSPAQMGVTMKRVMQE 326 >gi|224824503|ref|ZP_03697610.1| succinyl-CoA synthetase, alpha subunit [Lutiella nitroferrum 2002] gi|224602996|gb|EEG09172.1| succinyl-CoA synthetase, alpha subunit [Lutiella nitroferrum 2002] Length = 294 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 177/299 (59%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKVLVQG TGK GTFH EQA L T+VVGG+ P KG + G +PVF Sbjct: 1 MSVLVNKDTKVLVQGFTGKNGTFHAEQA-LKVGTKVVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A +T A+ASVIYVP + A D+I+E+++A + LIVCITEG+P LDM+ VK ++++ Sbjct: 56 TMKDAVRQTQADASVIYVPAAFAKDSILEAVDAGVKLIVCITEGVPTLDMLYVKKAVDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+TP CKIGIMP I G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GIRLIGPNCPGIITPGECKIGIMPWHIHNPGRIGIVSRSGTLTYEAVAQTTALGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID L+LF D T++IVM+GEIGGSAEEEAA+F K KP+V Sbjct: 176 IGIGGDPIPGTSHIDALKLFQDDPDTDAIVMIGEIGGSAEEEAAEFAKAYV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA IG+++ ELL S Sbjct: 232 GYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFKAFEQAGIAYTRSPAEIGKTMFELLKS 290 >gi|189345876|ref|YP_001942405.1| succinyl-CoA synthetase, alpha subunit [Chlorobium limicola DSM 245] gi|189340023|gb|ACD89426.1| succinyl-CoA synthetase, alpha subunit [Chlorobium limicola DSM 245] Length = 299 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 171/304 (56%), Positives = 226/304 (74%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T++LVQG+TG GTFHT Q + Y T VV G+ P KG + G + + Sbjct: 1 MSVLVNKDTRLLVQGITGGEGTFHTSQILEY-GTNVVAGVTPGKGGILYHGNDKDRFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV EA E+T AN SVI+VP AGDAI+E+ +A + +I+CITEG+PV DM+R A Sbjct: 60 VPVFNTVKEAVEKTEANTSVIFVPAPFAGDAIMEAADAGLKVIICITEGVPVNDMMRAYA 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + L+GPNCPG++TP KIGIMPG I +KGS+G++SRSGTLTYEAV Q + GL Sbjct: 120 FVQEKGAVLVGPNCPGVITPGEAKIGIMPGFIHKKGSIGVVSRSGTLTYEAVHQLTAVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT FID + +F D+ TE +VM+GEIGGSAEEEAA+++K Sbjct: 180 GQSTCIGIGGDPIIGTRFIDAVRMFAKDDETEGLVMIGEIGGSAEEEAAEYIKKY----F 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VGF+AG+TAPPGR MGHAGA++SGGKG AEDKI AM+ AGI + +P IG ++++ Sbjct: 236 NKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAEDKIRAMEAAGIHVVDNPGDIGEAMMK 295 Query: 296 LLGS 299 LG Sbjct: 296 ALGR 299 >gi|307203732|gb|EFN82692.1| Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Harpegnathos saltator] Length = 324 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 180/308 (58%), Positives = 233/308 (75%), Gaps = 14/308 (4%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +NTKV+ QG TGK GTFH +QA+ Y T++VGG++PKK T G PVF + Sbjct: 17 NLKIGENTKVICQGFTGKQGTFHCQQALDY-GTKIVGGVNPKKAGTQHLGK----PVFKS 71 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE T A A+VIYVPP GA AI+E+++AE+PLIVCITEGIP DMV+VK RL E++ Sbjct: 72 VKEAKEATGATATVIYVPPPGAAAAIMEAVDAEMPLIVCITEGIPQHDMVKVKRRLLEQN 131 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 132 KSRLIGPNCPGIIAPEQCKIGIMPGHIHQKGKIGIVSRSGTLTYEAVNQTTLAGLGQTLC 191 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK-------- 232 VGIGGDP GT+FID L++FL D + I+M+GEIGGSAEE AA++L + Sbjct: 192 VGIGGDPFNGTDFIDCLDIFLTDPECDGIIMIGEIGGSAEELAAEYLIENNTVGCCSQLL 251 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 G+ KP+V F+AG TAPPGR MGHAGA+ISGGKGGA+DKINA+++AG+ + SPA++G Sbjct: 252 GGKAKPVVSFIAGLTAPPGRRMGHAGAIISGGKGGAQDKINALEKAGVIVTRSPAQMGNE 311 Query: 293 LVELLGSL 300 L++++ L Sbjct: 312 LLKVMTRL 319 >gi|238920746|ref|YP_002934261.1| succinyl-CoA synthetase, alpha subunit [Edwardsiella ictaluri 93-146] gi|238870315|gb|ACR70026.1| succinyl-CoA synthetase, alpha subunit [Edwardsiella ictaluri 93-146] Length = 290 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 169/298 (56%), Positives = 220/298 (73%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ T+V+ QG TG GTFH+EQA+ Y T++VGG+ P KG + G +PVF Sbjct: 1 MSILINHETRVICQGFTGSQGTFHSEQALAY-GTRLVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T ANASVIYVP D+I+E+I+ I LI+CITEGIP LDM+ ++A+L++S Sbjct: 56 TVREAVSATGANASVIYVPAPFCKDSILEAIDGGISLIICITEGIPTLDMLVIRAKLDQS 115 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPNCPG++TP +CKIGIMPG I R G +GI+SRSGTLTYEAV QTS GLGQST Sbjct: 116 PGVRMIGPNCPGVITPGACKIGIMPGHIHRPGRIGIVSRSGTLTYEAVKQTSDVGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ G FID+L LF AD TE+IVM+GEIGG+AEEEAA ++K KP+ Sbjct: 176 CVGIGGDPIPGASFIDILALFQADPQTEAIVMIGEIGGNAEEEAAAYIKAYV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG++ ++ L Sbjct: 232 IGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVVTVRSLADIGQAALQAL 289 >gi|324501429|gb|ADY40637.1| Succinyl-CoA ligase [GDP-forming] subunit alpha [Ascaris suum] Length = 301 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 170/297 (57%), Positives = 220/297 (74%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +++NTKV++QG TGK GTFH +Q I Y +T VV G+ P K T G P+F T Sbjct: 6 ALKINRNTKVIIQGFTGKQGTFHGQQMIDY-KTNVVAGVSPAKAGTTHLGR----PIFAT 60 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA+E T A+ASVIYVP A AI E+++AEIPL+VCITEGIP DMVRVK RL ++ Sbjct: 61 VKEAREATGADASVIYVPAPFAAAAINEAVDAEIPLVVCITEGIPQQDMVRVKNRLLRQN 120 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P+ CKIGIMPG I +KG +G++SRSGTLTYEAV QT+ GLGQ+ Sbjct: 121 KTRLLGPNCPGIIAPEECKIGIMPGHIHQKGIIGVVSRSGTLTYEAVHQTTLVGLGQTLC 180 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+++GEIGG AEE AA++L + KP+V Sbjct: 181 VGIGGDPFNGTNFIDCLDIFLKDPRTKGIILIGEIGGQAEERAAEYLIEHNSGANSKPVV 240 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKG A DKI A+K+AG+ ++ SPA++G + + L Sbjct: 241 AFIAGVTAPPGRRMGHAGAIISGGKGSATDKIEALKKAGVHVSASPAQMGTLMAKAL 297 >gi|254420122|ref|ZP_05033846.1| succinyl-CoA synthetase, alpha subunit subfamily [Brevundimonas sp. BAL3] gi|196186299|gb|EDX81275.1| succinyl-CoA synthetase, alpha subunit subfamily [Brevundimonas sp. BAL3] Length = 300 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 221/299 (73%), Positives = 259/299 (86%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILV+K+TK++VQGLTGK G FHTEQA+ Y T++V G+HP KG T WTG + +P++ Sbjct: 1 MSILVNKDTKIIVQGLTGKTGGFHTEQALAYHGTKMVAGVHPTKGGTNWTGSHGETLPIY 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAEAK+ T A+ASVIYVPPSGA AIIE+I+AEIP I CITEGIPVLDMV VK RLE Sbjct: 61 ASVAEAKDATGADASVIYVPPSGAAAAIIEAIDAEIPFITCITEGIPVLDMVNVKRRLEG 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGILTPD CKIGIMPG+IF+KGSVGI+SRSGTLTYEAVFQT+ EGLGQ+T Sbjct: 121 SKSRLLGPNCPGILTPDECKIGIMPGNIFKKGSVGIVSRSGTLTYEAVFQTTNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLELFLAD T SI+M+GEIGG AEE+AAQFL DEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLELFLADPETTSIIMIGEIGGGAEEDAAQFLIDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++ SPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMEAAGIRMSESPARLGKTLVEVLK 299 >gi|332826623|gb|EGJ99452.1| hypothetical protein HMPREF9455_00485 [Dysgonomonas gadei ATCC BAA-286] Length = 290 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 150/299 (50%), Positives = 216/299 (72%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++++T+++VQG+TG+ G+FHT++ + Y T +VGG P KG T G VPVF Sbjct: 1 MSILINESTRLIVQGITGRDGSFHTKKMLEY-GTNIVGGTSPGKGGTEILG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T AN S+I+VP A DAI+E+ +A + LI+CI+EG+P LD V+ + Sbjct: 56 TVYEAVQQTQANTSIIFVPAKFAADAIMEAADAGVRLIICISEGLPTLDAVKAFRYTQMK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG+++PD C +GI+PG IF+KG++G++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GVMLIGPNCPGLMSPDKCLVGILPGQIFKKGNIGVISRSGTLTYEVVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDPV G + ++LE+ D T++IVM+GEIGG+AEE+AA++++ KP+V Sbjct: 176 VGMGGDPVVGLYYRELLEMLQNDPDTDAIVMIGEIGGNAEEQAAEYIRKHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+ AP G+ MGHAGA+I+GG G A DKI A++ AG+ +A P+ I L E LG+ Sbjct: 232 GFIAGQAAPQGKQMGHAGAIIAGGSGTAADKIAALEAAGVRVAKEPSEIPGLLKERLGN 290 >gi|226491860|ref|NP_001149702.1| succinyl-CoA ligase alpha-chain 2 [Zea mays] gi|195629598|gb|ACG36440.1| succinyl-CoA ligase alpha-chain 2 [Zea mays] Length = 331 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 181/298 (60%), Positives = 228/298 (76%), Gaps = 9/298 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK+T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF + Sbjct: 36 AVFVDKSTRVICQGITGKNGTFHTEQAIEY-GTNMVGGVTPKKGGTEHLG----LPVFNS 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEAK T ANA+VIYVPP A AI+E++EAE+ L VCITEGIP DMV+VKA L +S Sbjct: 91 VAEAKAETKANATVIYVPPPFAAAAIMEAMEAELDLAVCITEGIPQHDMVKVKAALNSQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 151 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTC 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D TE IV++GEIGG+AEE+AA F+++ + KP+V Sbjct: 211 VGIGGDPFNGTNFVDCLEKFVNDPQTEGIVLIGEIGGTAEEDAATFIQESKTQ---KPVV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA+++GGKG A+DKI A++EAG+ + SPA+IG ++ E+ Sbjct: 268 AFIAGLTAPPGRRMGHAGAIVAGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIFK 325 >gi|114798328|ref|YP_759041.1| succinyl-CoA synthetase subunit alpha [Hyphomonas neptunium ATCC 15444] gi|114738502|gb|ABI76627.1| succinyl-CoA synthetase, alpha subunit [Hyphomonas neptunium ATCC 15444] Length = 300 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 220/299 (73%), Positives = 261/299 (87%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSIL+DKNTKVL QG+TG G+FHT QA+ Y TQ+VGGIHPKKG W N +P+F Sbjct: 1 MSILIDKNTKVLTQGMTGNTGSFHTNQALAYYGTQMVGGIHPKKGGEMWKADNGQELPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAE KE+T A ASV+YVPP+GA AI E+I+AEIPLIVCITEG+PV+DMVRVKA+L K Sbjct: 61 ASVAEGKEKTGATASVVYVPPAGAAAAIEEAIDAEIPLIVCITEGVPVMDMVRVKAKLAK 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRLIGPNCPGI+T ++CKIGIMPGSIF+KGSVGI+SRSGTLTYEAVFQT+ GLGQ+T Sbjct: 121 SKSRLIGPNCPGIITANACKIGIMPGSIFKKGSVGIVSRSGTLTYEAVFQTTNAGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFID+LE+FLAD+ T+SI+M+GEIGGSAEEEAAQFL DEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDILEMFLADDETQSIIMIGEIGGSAEEEAAQFLMDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGRTMGHAGA++SGGKG AE KI AM+ AGI ++PSPAR+G +LVE+L Sbjct: 241 AGFIAGRTAPPGRTMGHAGAIVSGGKGDAESKIAAMEAAGIRVSPSPARLGTTLVEVLK 299 >gi|150388322|ref|YP_001318371.1| succinyl-CoA synthetase subunit alpha [Alkaliphilus metalliredigens QYMF] gi|149948184|gb|ABR46712.1| succinyl-CoA synthetase, alpha subunit [Alkaliphilus metalliredigens QYMF] Length = 300 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 172/299 (57%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+D+NTKV+VQG+TG G FHT+QA+ Y T +V G+ P KG T G +PVF Sbjct: 1 MSVLIDENTKVIVQGITGFTGLFHTKQAMEY-GTNIVAGVTPTKGGTTVEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T N SVIYVPP A DAI+E+ EAE+ L++CITEGIPV+DM++VKA ++ Sbjct: 56 TVKEAVKATGGNTSVIYVPPIFAADAILEATEAELELVICITEGIPVMDMIKVKAFMKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV Q S G+GQSTA Sbjct: 116 KTRLIGPNCPGVITPEVCKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSTRGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FID+L+ F DE T +++M+GEIGG+AEEEAA++++ KP+V Sbjct: 176 VGIGGDPVNGTSFIDMLKAFNEDEETYAVMMIGEIGGTAEEEAAEWIQSNM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+ GKTAPP + MGHAGAVISGGKG A KI ++ GI +A +P +G +L+ +L Sbjct: 232 AFIGGKTAPPSKRMGHAGAVISGGKGKASSKIKTLEACGIKVASTPDVMGETLIAVLKE 290 >gi|91762633|ref|ZP_01264598.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Candidatus Pelagibacter ubique HTCC1002] gi|91718435|gb|EAS85085.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Candidatus Pelagibacter ubique HTCC1002] Length = 291 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 195/299 (65%), Positives = 238/299 (79%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+ QG TG GTFH+EQA+ Y T +VGG+ PKKG +++ PVF Sbjct: 1 MSVLINKNTKVICQGFTGTHGTFHSEQALKY-GTNLVGGVTPKKGGQ----KHLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK+ A+A++IYVP A AIIE+I+A I LIVCITEG+P+ DM+RVK +L S Sbjct: 56 TVAEAKQEVGADATMIYVPAKFAAAAIIEAIDASIELIVCITEGVPIQDMLRVKQKLNNS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TPD CKIGIMPG+I +KGSVGI+SRSGTLTYEAV QT++ GLGQST Sbjct: 116 KSRLIGPNCPGIITPDECKIGIMPGNIHKKGSVGIVSRSGTLTYEAVAQTTENGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+LFL D TESI+M+GEIGGSAEEEAA+F+K+ KKP+V Sbjct: 176 IGIGGDPINGTNFIDCLDLFLNDAETESILMIGEIGGSAEEEAAEFVKNHKI---KKPMV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GFVAG TAPPGRTMGHAGA+ISGGKGGAEDKI M+E GI IA SP+ +G++L L + Sbjct: 233 GFVAGITAPPGRTMGHAGAIISGGKGGAEDKIKKMEECGITIAKSPSELGKTLFNKLSN 291 >gi|224050291|ref|XP_002188424.1| PREDICTED: succinate-CoA ligase, GDP-forming, alpha subunit [Taeniopygia guttata] Length = 331 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 176/299 (58%), Positives = 227/299 (75%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V+KNTKV+ QG TGK GTFH++QA+ Y T +VGGI P KG G +PVF + Sbjct: 34 NLYVNKNTKVICQGFTGKQGTFHSQQALEY-GTNLVGGISPGKGGKTHLG----LPVFNS 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A+A+VIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL ++ Sbjct: 89 VKEAKEQTGASATVIYVPPPFAAAAINEAIDAEMPLVVCITEGIPQQDMVRVKHRLLRQN 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 149 KTRLVGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSFC 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D TE I+++GEIGG+AEE+AA FLK+ KP+V Sbjct: 209 VGIGGDPFNGTNFIDCLDVFLKDPRTEGIILIGEIGGNAEEDAAAFLKENNAGPNAKPVV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 269 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTIYKEFEK 327 >gi|71082943|ref|YP_265662.1| succinyl-CoA synthetase subunit alpha (SCS-alpha) [Candidatus Pelagibacter ubique HTCC1062] gi|71062056|gb|AAZ21059.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Candidatus Pelagibacter ubique HTCC1062] Length = 291 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 196/299 (65%), Positives = 238/299 (79%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DKNTKV+ QG TG GTFH+EQA+ Y T +VGG+ PKKG +++ PVF Sbjct: 1 MSVLIDKNTKVICQGFTGTHGTFHSEQALKY-GTNLVGGVTPKKGGQ----KHLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK+ A+A++IYVP A AIIE+I+A I LIVCITEG+P+ DM+RVK +L S Sbjct: 56 TVAEAKQEVGADATMIYVPAKFAAAAIIEAIDASIELIVCITEGVPIQDMLRVKQKLNNS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TPD CKIGIMPG+I +KGSVGI+SRSGTLTYEAV QT++ GLGQST Sbjct: 116 KSRLIGPNCPGIITPDECKIGIMPGNIHKKGSVGIVSRSGTLTYEAVAQTTENGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+LFL D TESI+M+GEIGGSAEEEAA+F+K+ KKP+V Sbjct: 176 IGIGGDPINGTNFIDCLDLFLNDAETESILMIGEIGGSAEEEAAEFVKNHKI---KKPMV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GFVAG TAPPGRTMGHAGA+ISGGKGGAEDKI M+E GI IA SP+ +G++L L + Sbjct: 233 GFVAGITAPPGRTMGHAGAIISGGKGGAEDKIKKMEECGITIAKSPSELGKTLFNKLSN 291 >gi|84997165|ref|XP_953304.1| Succinyl-CoA ligase [GDP-forming] alpha-chain, mitochondrial precursor [Theileria annulata] gi|65304300|emb|CAI76679.1| Succinyl-CoA ligase [GDP-forming] alpha-chain, mitochondrial precursor [Theileria annulata] Length = 329 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 160/301 (53%), Positives = 218/301 (72%), Gaps = 7/301 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW--TGGNVNVPVFT 60 + +DK+TK++ QGLTGK TFHT + + Y T+ VGG++PKKG T W ++P+FT Sbjct: 31 VYIDKDTKIICQGLTGKQATFHTTECLKYYGTKFVGGVNPKKGGTSWKSLDDKHSLPIFT 90 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 +V+EAK+ T A+ASVIYVPP GA DAI+E+IEAE+PL++CITEGIP DMV+VK L+ Sbjct: 91 SVSEAKKETGADASVIYVPPPGAADAIVEAIEAELPLVICITEGIPQHDMVKVKTLLKDP 150 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPGI+ P+ CKIGIMPG I +KG VGI+SRSGTLTYEAV QT++ GLGQS Sbjct: 151 YCKTTLIGPNCPGIIKPEECKIGIMPGHIHKKGVVGIISRSGTLTYEAVTQTTEIGLGQS 210 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GIGGDP G F D + F+ + T+ ++++GEIGG+AEE+ A ++K KP Sbjct: 211 VCIGIGGDPFGGISFTDAFKKFVKNPETKGVLIIGEIGGTAEEDVADWIKAN---PTDKP 267 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +AG +APPG+ MGHAGA+ISG KG A KI A++++G+ + SPA +G ++ L Sbjct: 268 VVAIIAGISAPPGKRMGHAGAIISGNKGTAHGKIQALRDSGVIVPNSPAEMGLAMFNALK 327 Query: 299 S 299 Sbjct: 328 K 328 >gi|258597229|ref|XP_001347772.2| succinyl-CoA synthetase alpha subunit, putative [Plasmodium falciparum 3D7] gi|254832608|gb|AAN35685.2| succinyl-CoA synthetase alpha subunit, putative [Plasmodium falciparum 3D7] Length = 327 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 167/304 (54%), Positives = 220/304 (72%), Gaps = 7/304 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--GNVNVPVFT 60 + +DKNT V+ QG+TGK GTFHT +A+ Y T++VGG++P+K T WT +PVF Sbjct: 24 VFIDKNTTVICQGITGKQGTFHTTEALKY-GTKMVGGVNPRKKGTTWTSYDNKYTLPVFG 82 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 T+ EAKE T ASV+YVPP A A+IESIEAEIPLIVCITEGI DM+ VK+ L+ Sbjct: 83 TILEAKENTNCYASVLYVPPEHAKSAMIESIEAEIPLIVCITEGICQHDMLEVKSCLKMS 142 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + LIGPNCPGI+ P CKIGIMP I +KG VGI+SRSGTLTYE V QT++ GLGQST Sbjct: 143 KKTTLIGPNCPGIIKPGECKIGIMPSHIHKKGCVGIVSRSGTLTYEGVNQTTKVGLGQST 202 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK---RGRK 236 +GIGGDP GT F+D ++LFL D+ TE I+++GEIGG +EE+ AQ+L + +K Sbjct: 203 CIGIGGDPFHGTNFLDCIKLFLEDDQTECILLIGEIGGDSEEQVAQWLIQNNVDNGKRKK 262 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+ F+AGK APPG+ MGHAGA+ISGGKG A+ KI A++ AG+ + +P ++G + + Sbjct: 263 KPVFAFIAGKCAPPGKRMGHAGALISGGKGTADGKIEALQNAGVHVILNPTKMGEDIYAV 322 Query: 297 LGSL 300 + +L Sbjct: 323 MQTL 326 >gi|152980019|ref|YP_001352081.1| succinyl-CoA synthetase subunit alpha [Janthinobacterium sp. Marseille] gi|151280096|gb|ABR88506.1| succinyl-CoA synthetase alpha chain [Janthinobacterium sp. Marseille] Length = 291 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 163/299 (54%), Positives = 214/299 (71%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT+ I Y V G++PKK + G VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTKMCIEYANGKNCFVAGVNPKKAGESFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +VAEAK T A SVIYVPP A AI E+++A + L++CITEGIPV DM+R K R+E Sbjct: 57 YGSVAEAKAETGATVSVIYVPPPFAAAAIDEAVDAGVDLVICITEGIPVRDMIRTKQRME 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + L+GPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEA Q ++ GLGQS Sbjct: 117 GKKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAAGQLAEFGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV G + IDVL +F D T++++MVGEIGG AEE A+++KD KKP Sbjct: 177 TVVGIGGDPVSGLKHIDVLRMFNDDPDTDAVIMVGEIGGDAEETCARWIKDNM----KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG TAP G+ MGHAGA+ISGGKG A++K+ M+ GI + +PA +GR L +L Sbjct: 233 VVGFIAGVTAPAGKRMGHAGAIISGGKGTAQEKLAVMEACGIKVTRNPAEMGRLLKSVL 291 >gi|153005044|ref|YP_001379369.1| succinyl-CoA synthetase subunit alpha [Anaeromyxobacter sp. Fw109-5] gi|152028617|gb|ABS26385.1| succinyl-CoA synthetase, alpha subunit [Anaeromyxobacter sp. Fw109-5] Length = 339 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 173/300 (57%), Positives = 224/300 (74%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI V+++T+V+VQG+TG AG+FHTEQ + Y T+VV G+ P +G T + G VP+F Sbjct: 1 MSIYVNRDTRVVVQGITGSAGSFHTEQMLEY-GTRVVAGVTPNRGGTKFQGT---VPIFH 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EK 119 TV +A + T ANA+VI+VPP A DAI ES + IPL+V ITEGIPVLDM+RV+ L E+ Sbjct: 57 TVDDAVKETGANAAVIFVPPPFAADAITESADVGIPLVVAITEGIPVLDMIRVRRFLAER 116 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RLIGPNCPG++TP CKIGIMPG I R G +G++SRSGTLTYEAV Q + GLGQS+ Sbjct: 117 PGTRLIGPNCPGLITPGECKIGIMPGHIHRPGRIGVVSRSGTLTYEAVKQLTDLGLGQSS 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPV GT+F+DVL F D T++I+M+GEIGG+ EE A F++D KKP+ Sbjct: 177 AVGIGGDPVHGTDFVDVLREFADDPGTDAIIMIGEIGGTEEERGAAFVRDHV----KKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VGF+AG+TAPPG+ MGHAGAV+SGG G AE KI AM++AGI + P +GR++ + L Sbjct: 233 VGFIAGRTAPPGKRMGHAGAVVSGGSGTAEAKIEAMRDAGITVVDGPHLLGRAMKDALAR 292 >gi|158634608|gb|ABW76150.1| succinyl-CoA synthetase alpha subunit [Blastocystis sp. NandII] gi|164608344|gb|ABY62723.1| mitochondrial succinyl-CoA synthetase alpha subunit [Blastocystis sp. ATCC 50177] Length = 318 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 228/298 (76%), Gaps = 8/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT+V+ QG+TGK GTFHT+QAI Y T++VGG++PKK T G +P+F +V Sbjct: 24 VWVDKNTRVIGQGITGKNGTFHTQQAIEY-GTKMVGGVNPKKAGTTHLG----LPIFASV 78 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSS 121 EAK+ T A+A+VIYVPPSGA AI+E++ AEIPLIVCITEGIP DM+RVK ++ ++ Sbjct: 79 EEAKKATNADATVIYVPPSGAAGAILEAVAAEIPLIVCITEGIPQHDMLRVKDIMKSQNK 138 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 SRLIGPNCPGI+ P+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQST V Sbjct: 139 SRLIGPNCPGIIKPEECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVHQTTMYGLGQSTVV 198 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE F D TE IVM+GEIGG+AEE+AA++LK KP+V Sbjct: 199 GIGGDPFNGTNFIDCLERFTNDPQTEGIVMIGEIGGTAEEDAAEWLKQY--GNPNKPVVS 256 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAPPGR MGHAGA+ISGGKG A+ K+ A+ AG+ + +PA IG ++ ++ + Sbjct: 257 FIAGRTAPPGRRMGHAGAIISGGKGTAKAKMEALTSAGVKVVETPAMIGEAMFNMMKA 314 >gi|255958286|ref|NP_063932.2| succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor [Mus musculus] gi|223634732|sp|Q9WUM5|SUCA_MOUSE RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor Length = 346 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 180/298 (60%), Positives = 226/298 (75%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I +DKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 IYIDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQKHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DMVRVK RL + + Sbjct: 105 KEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGT 164 Query: 123 -RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS + Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCI 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG AEE AA FLK+ + KP+V Sbjct: 225 GIGGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENAAAFLKEHNSGPKAKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEK 342 >gi|193216377|ref|YP_001997576.1| succinyl-CoA synthetase subunit alpha [Chloroherpeton thalassium ATCC 35110] gi|193089854|gb|ACF15129.1| succinyl-CoA synthetase, alpha subunit [Chloroherpeton thalassium ATCC 35110] Length = 299 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 167/304 (54%), Positives = 227/304 (74%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T+++VQG+TG GTFHT Q + Y T VV G+ P KG + G + Sbjct: 1 MSVLVNKDTRLVVQGITGGEGTFHTSQMLEY-GTNVVAGVTPGKGGMQYNGNEKDPFIRE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VP+F TV +A ++ AN SVI+VP + AGDAI+E+ EA I +I+CITEGIPV DM++ Sbjct: 60 VPIFNTVKDAVKKAEANTSVIFVPAAFAGDAIMEAAEAGIKVIICITEGIPVNDMMKAYF 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + L+GPNCPG++TP KIGIMPG I + GS+G++SRSGTLTYEAV Q +Q GL Sbjct: 120 FVKEKGAVLVGPNCPGVITPGEAKIGIMPGFIHKPGSIGVISRSGTLTYEAVNQLTQVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT+F+D ++LF D TE +V++GEIGG+AEEEAA ++K R Sbjct: 180 GQSTCIGIGGDPIIGTKFLDAVKLFAKDPDTEGLVVIGEIGGNAEEEAAAYIK----RNY 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG AEDK+ AM+ AGI + +PA IG ++++ Sbjct: 236 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAEDKLAAMRSAGIYVVENPADIGETMLK 295 Query: 296 LLGS 299 LG Sbjct: 296 ALGR 299 >gi|323451150|gb|EGB07028.1| hypothetical protein AURANDRAFT_28269 [Aureococcus anophagefferens] Length = 310 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 217/298 (72%), Gaps = 8/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + ++K TKV+ QG TGK GTFH+EQA+ Y T VVGG+ PKKG G +PVF TV Sbjct: 11 VWINKETKVICQGFTGKQGTFHSEQALAY-GTNVVGGVTPKKGGQEHLG----LPVFDTV 65 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 +AK+ +AS+IYVPP AI+++IEAEIPL+V ITEG+P DMV VK L +S+ Sbjct: 66 MDAKKAVNPDASMIYVPPPFCKAAIMDAIEAEIPLVVAITEGVPQQDMVEVKYHLTRQSA 125 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I +KG +G++SRSGTLTYEAV QT+ GLGQST V Sbjct: 126 TRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGVVSRSGTLTYEAVHQTTVTGLGQSTCV 185 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE F D TE I+M+GEIGGSAEEEAA++LK KP+VG Sbjct: 186 GIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAAEWLKAH--GDPDKPVVG 243 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA++SGGKG A K A ++AG+ I+ SPA++G ++++ Sbjct: 244 FIAGTTAPPGRRMGHAGAIVSGGKGTAAAKFAAFEDAGVFISRSPAQLGSTMIQAFKE 301 >gi|29346197|ref|NP_809700.1| succinyl-CoA synthetase alpha chain [Bacteroides thetaiotaomicron VPI-5482] gi|253568371|ref|ZP_04845782.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 1_1_6] gi|29338092|gb|AAO75894.1| succinyl-CoA synthetase alpha chain [Bacteroides thetaiotaomicron VPI-5482] gi|251842444|gb|EES70524.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 1_1_6] Length = 286 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 149/295 (50%), Positives = 212/295 (71%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+++VQG+TG+ G FH ++ Y T VVGG P KG T G +PVF Sbjct: 1 MSILIDKSTRLIVQGITGRDGLFHAKKMKEY-GTNVVGGTSPGKGGTEVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA ++T AN S+I+VP A D I+E+ +A I LIVCI EGIP LD+++ E+ Sbjct: 56 TMHEAVKQTQANTSIIFVPARFAADTIMEAADAGIRLIVCIAEGIPTLDVIKAHRFAEQR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPG+++P +GI+PG +F+KG+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAMLVGPNCPGLISPGESMVGILPGQVFQKGNVGVISRSGTLTYEIVYHLTTNGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+ +LE+F D T++IV++GEIGG+AEE+AA++++ KP+V Sbjct: 176 IGIGGDPVVGLHFLKLLEMFQNDPETKAIVLIGEIGGNAEEQAAEYIRSHV----NKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG++APPG+ MGHAGA+ISGG G A+DKI A++ AGI +A P+ I + L Sbjct: 232 AFIAGQSAPPGKQMGHAGAIISGGSGSAKDKIEALEAAGIRVAQEPSDIPKLLKR 286 >gi|322417829|ref|YP_004197052.1| succinyl-CoA synthetase subunit alpha [Geobacter sp. M18] gi|320124216|gb|ADW11776.1| succinyl-CoA synthetase, alpha subunit [Geobacter sp. M18] Length = 296 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 166/299 (55%), Positives = 219/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+++++VQG+TG++G FHT+Q Y + VV G+ P KG + G +PVF Sbjct: 1 MSILINKSSRIVVQGITGRSGLFHTQQCRAY-GSNVVAGVTPGKGGIHIEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T AN S+I+VPP GA DAI+E++ A + L VCITEGIPV DMV VKA L++S Sbjct: 56 TVAEAVRYTDANVSMIFVPPPGAADAILEAVAAGLELAVCITEGIPVRDMVPVKAVLQQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP CKIGIMPG I + G +G++SRSGTLTYEAV Q S LGQST Sbjct: 116 KMRLVGPNCPGVITPGECKIGIMPGHIHKPGKIGVVSRSGTLTYEAVKQLSDMELGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G FIDVL+LF D TE + M+GEIGGSAEE+AA ++++ + KP+ Sbjct: 176 VGIGGDPIIGMNFIDVLKLFNDDPGTEGVFMIGEIGGSAEEDAAHWIRENMR----KPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPG+ MGHAGA+I+GGKG AEDKI + E G+ +A SP ++G ++ L + Sbjct: 232 AFIAGVTAPPGKRMGHAGAIITGGKGKAEDKIRTLDECGVVVASSPTKMGEAMQCALAA 290 >gi|149635493|ref|XP_001507019.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 388 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 176/299 (58%), Positives = 223/299 (74%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V+K TKV+ QG TGK GTFH++QA+ Y T +VGG P KG G +PVF T Sbjct: 91 NLYVNKTTKVICQGFTGKQGTFHSQQALDY-GTNLVGGTSPGKGGKTHLG----LPVFNT 145 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A ASVIYVPP A AI E++EAE+PL+VCITEGIP DMVRVK L +S Sbjct: 146 VKEAKEQTGATASVIYVPPPFAAAAINEAVEAEMPLVVCITEGIPQQDMVRVKHSLTRQS 205 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 206 KTRLVGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSFC 265 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID LE+FL D +TE I+++GEIGG+AEE+AA +LK KP+V Sbjct: 266 VGIGGDPFNGTNFIDCLEVFLKDPSTEGIILIGEIGGNAEEDAAAYLKQHNSGPNAKPVV 325 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 326 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTMYKEFEK 384 >gi|281342263|gb|EFB17847.1| hypothetical protein PANDA_011931 [Ailuropoda melanoleuca] Length = 308 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 182/294 (61%), Positives = 226/294 (76%), Gaps = 6/294 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QG TGK GTFH++QA+ Y TQ+VGG P KG G +PVF TV Sbjct: 20 LYVDKNTKVICQGFTGKQGTFHSQQALDY-GTQLVGGTTPGKGGQTHLG----LPVFNTV 74 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE T A ASVIYVPP A AI E++EAE+PL+VCITEGIP DMVRVK +L + Sbjct: 75 KEAKEETGATASVIYVPPPFAAAAINEAVEAEVPLVVCITEGIPQQDMVRVKHKLLRQGK 134 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 135 TRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 194 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 195 GIGGDPFNGTDFIDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKAKPVVS 254 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 255 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 308 >gi|12836764|dbj|BAB23804.1| unnamed protein product [Mus musculus] gi|15029739|gb|AAH11087.1| Succinate-CoA ligase, GDP-forming, alpha subunit [Mus musculus] gi|148666584|gb|EDK99000.1| succinate-CoA ligase, GDP-forming, alpha subunit, isoform CRA_a [Mus musculus] Length = 333 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 180/298 (60%), Positives = 226/298 (75%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I +DKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 37 IYIDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQKHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DMVRVK RL + + Sbjct: 92 KEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGT 151 Query: 123 -RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS + Sbjct: 152 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCI 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG AEE AA FLK+ + KP+V Sbjct: 212 GIGGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENAAAFLKEHNSGPKAKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 272 FIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEK 329 >gi|298916884|dbj|BAJ09739.1| succinate-CoA ligase GDP forming alpha subunit [Dicyema japonicum] Length = 323 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 160/297 (53%), Positives = 218/297 (73%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I ++KNT+V+ QG TG+ GTFH + ++ Y TQ+VGG+ P KG + G +PVF T Sbjct: 28 NIEINKNTRVICQGFTGRQGTFHCKASLDY-GTQIVGGVSPGKGGSMHMG----LPVFDT 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 VA+AK T A AS+I+VP A AI E+I+AE+PL+VCITEGIP DM+ +K +L Sbjct: 83 VAQAKAETGATASLIFVPAPVASAAIEEAIDAELPLVVCITEGIPQHDMIHIKKKLMAQK 142 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPGI+ PD C+IGIMP SI + G +GI+SRSGTLTYEAV QT++ GLGQ+ Sbjct: 143 ITRMIGPNCPGIIKPDQCRIGIMPSSIHKLGCIGIVSRSGTLTYEAVHQTTRNGLGQNLV 202 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL ++ + I+++GEIGG EE+AA++L K KP+ Sbjct: 203 VGIGGDPFSGTNFIDCLDIFLKNDQVKGILLIGEIGGDEEEKAAEYLLVNNKGPNAKPVA 262 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAPPGR MGHAGA+ISG KG A+ KI+A+KEAG+ + SPA++G ++ E + Sbjct: 263 SFIAGRTAPPGRRMGHAGAIISGNKGTADAKISALKEAGVNVTLSPAQMGSAMFEAM 319 >gi|269139926|ref|YP_003296627.1| succinyl-CoA synthetase subunit alpha [Edwardsiella tarda EIB202] gi|267985587|gb|ACY85416.1| succinyl-CoA synthetase subunit alpha [Edwardsiella tarda EIB202] gi|304559761|gb|ADM42425.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Edwardsiella tarda FL6-60] Length = 290 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 167/299 (55%), Positives = 219/299 (73%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ T+V+ QG TG GTFH+EQA+ Y T++VGG+ P KG + G +PVF Sbjct: 1 MSILINHETRVICQGFTGSQGTFHSEQALAY-GTRLVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A+ASVIYVP D+I+E+I+ I LI+CITEGIP DM+ ++A+L++S Sbjct: 56 TVREAVLATDASASVIYVPAPFCKDSILEAIDGGISLIICITEGIPTQDMLVIRAKLDQS 115 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPNCPG++TP +CKIGIMPG I R G +GI+SRSGTLTYEAV QTS GLGQST Sbjct: 116 PGVRMIGPNCPGVITPGACKIGIMPGHIHRPGRIGIVSRSGTLTYEAVKQTSDVGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ G+ FID+L LF AD TE+IVM+GEIGG+AEEEAA ++K KP+ Sbjct: 176 CVGIGGDPIPGSSFIDILALFQADPQTEAIVMIGEIGGNAEEEAAAYIKAHV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG++ + L Sbjct: 232 IGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVVTVRSLADIGQAALRALA 290 >gi|296122652|ref|YP_003630430.1| succinyl-CoA synthetase, subunit alpha [Planctomyces limnophilus DSM 3776] gi|296014992|gb|ADG68231.1| succinyl-CoA synthetase, alpha subunit [Planctomyces limnophilus DSM 3776] Length = 300 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 168/306 (54%), Positives = 220/306 (71%), Gaps = 15/306 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY------CQTQVVGGIHPKKGSTYWTGGNV 54 MSILVDKNTK++ QG+TGKAG FH++Q Y + VGG+ P KG T Sbjct: 1 MSILVDKNTKIICQGITGKAGLFHSQQCRAYAKEHRPGENVFVGGVTPGKGGTTVD---- 56 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + PVF TVAEA +T AN S+I+VPP A D+I+E+ +A I LIVCITEGIPVLDM RVK Sbjct: 57 DFPVFNTVAEACAKTGANCSLIFVPPPFAADSILEAADAGIELIVCITEGIPVLDMARVK 116 Query: 115 ARLE-KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 L SRLIGPNCPG++TP KIGIMPG I + G+VG++S+SGTLTYEA +Q Sbjct: 117 KALAFYPKSRLIGPNCPGVITPGVAKIGIMPGYIHKPGTVGLISKSGTLTYEATWQLGNL 176 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 GLGQSTAVGIGGDP+ GT +I++LE+F D TE+I+M+GEIGG+AE +AA+++K Sbjct: 177 GLGQSTAVGIGGDPIIGTPYIELLEMFQNDPGTEAIMMIGEIGGNAEIKAAEYIKAHV-- 234 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+ F+AG+TAPPG+ MGHAGA+ISGG G AE+K+ A++ AG+ +A SP +G +L Sbjct: 235 --TKPVAAFIAGQTAPPGKRMGHAGAIISGGAGTAEEKMAALEAAGVVVARSPGEMGVAL 292 Query: 294 VELLGS 299 + + + Sbjct: 293 KKAIDN 298 >gi|157148043|ref|YP_001455362.1| hypothetical protein CKO_03850 [Citrobacter koseri ATCC BAA-895] gi|157085248|gb|ABV14926.1| hypothetical protein CKO_03850 [Citrobacter koseri ATCC BAA-895] Length = 290 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 169/299 (56%), Positives = 218/299 (72%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DK T+VLVQG+TGK GTFHTEQAI Y TQ+VGGI P KG ++ PVF Sbjct: 1 MSVLIDKYTRVLVQGITGKNGTFHTEQAIAY-GTQIVGGITPGKGGQRH----LDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 ++ EA +T A+ASVIYVP D+++E++EA + LIV ITEG+P LDMV+V+ L+ Sbjct: 56 SMKEAMRQTQADASVIYVPAPFVLDSVVEAVEAGVKLIVVITEGVPTLDMVKVRRLLDCH 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPGI+TP +CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PEVRLIGPNCPGIITPGACKIGIMPGDIHRPGRIGIISRSGTLTYEAVAQTTALGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT FID L LF D T++++M+GEIGG+AEE AA+F++ E KP+ Sbjct: 176 CIGIGGDPIPGTNFIDALRLFADDPQTDAVIMIGEIGGNAEEHAAEFIRHEM----NKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +G++AG TAP G+ MGHAGA+ISG G AEDK A +AG+ +PA+IG +L + Sbjct: 232 IGYIAGVTAPKGKRMGHAGAIISGSSGSAEDKFRAFDKAGMTWTRNPAQIGETLWNAIK 290 >gi|29840540|ref|NP_829646.1| succinyl-CoA synthetase subunit alpha [Chlamydophila caviae GPIC] gi|29834889|gb|AAP05524.1| succinyl-Coa synthetase, alpha chain [Chlamydophila caviae GPIC] Length = 291 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 159/299 (53%), Positives = 215/299 (71%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M + K T ++ QG+TGKAG+FHTEQ + Y + +GG+ P KG T +N+PV+ Sbjct: 1 MFCSLSKKTPIITQGITGKAGSFHTEQCLAY-GSNFIGGVTPGKGGTTH----LNLPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK+ T A++I+VPP+ A +AI+E+ +A I LIVCITEGIP+ DM+ V +E S Sbjct: 56 SVLEAKQATRCQATMIFVPPAYAAEAILEAEDAGIDLIVCITEGIPIKDMLEVSHVMEHS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPGI+ P +CKIGIMPG I G+VG++SRSGTLTYEAV+Q +Q +GQS Sbjct: 116 ASRLIGPNCPGIIKPGACKIGIMPGYIHLPGNVGLVSRSGTLTYEAVWQLTQRSIGQSVC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FIDVLE F D TE I+M+GEIGGSAEEEAA++++ KP+V Sbjct: 176 IGIGGDPLNGTSFIDVLEEFQNDPQTELILMIGEIGGSAEEEAAEWIQTYC----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP G+ MGHAGA+ISG G A+ K A+++AG+ + SPA IG ++ + S Sbjct: 232 AFIAGETAPKGKRMGHAGAIISGNSGDAKSKKEALRKAGVFVVESPALIGETVEAVFRS 290 >gi|12832967|dbj|BAB22331.1| unnamed protein product [Mus musculus] Length = 333 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 225/298 (75%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I +DKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 37 IYIDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQKHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DMVRVK RL + + Sbjct: 92 KEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGT 151 Query: 123 -RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 RLIGPNCPG++ P CKIGIMP I +KG +GI+SRSGTLTYEAV QT+Q GLGQS + Sbjct: 152 TRLIGPNCPGVINPGECKIGIMPAHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCI 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG AEE AA FLK+ + KP+V Sbjct: 212 GIGGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENAAAFLKEHNSGPKAKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 272 FIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEK 329 >gi|225320699|dbj|BAH29745.1| succinate-CoA ligase GDP forming alpha subunit [Dicyema japonicum] Length = 324 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 160/297 (53%), Positives = 218/297 (73%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I ++KNT+V+ QG TG+ GTFH + ++ Y TQ+VGG+ P KG + G +PVF T Sbjct: 29 NIEINKNTRVICQGFTGRQGTFHCKASLDY-GTQIVGGVSPGKGGSMHMG----LPVFDT 83 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 VA+AK T A AS+I+VP A AI E+I+AE+PL+VCITEGIP DM+ +K +L Sbjct: 84 VAQAKAETGATASLIFVPAPVASAAIEEAIDAELPLVVCITEGIPQHDMIHIKKKLMAQK 143 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPGI+ PD C+IGIMP SI + G +GI+SRSGTLTYEAV QT++ GLGQ+ Sbjct: 144 ITRMIGPNCPGIIKPDQCRIGIMPSSIHKLGCIGIVSRSGTLTYEAVHQTTRNGLGQNLV 203 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL ++ + I+++GEIGG EE+AA++L K KP+ Sbjct: 204 VGIGGDPFSGTNFIDCLDIFLKNDQVKGILLIGEIGGDEEEKAAEYLLVNNKGPNAKPVA 263 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAPPGR MGHAGA+ISG KG A+ KI+A+KEAG+ + SPA++G ++ E + Sbjct: 264 SFIAGRTAPPGRRMGHAGAIISGNKGTADAKISALKEAGVNVTLSPAQMGSAMFEAM 320 >gi|288959418|ref|YP_003449759.1| succinyl-CoA synthetase alpha chain [Azospirillum sp. B510] gi|288911726|dbj|BAI73215.1| succinyl-CoA synthetase alpha chain [Azospirillum sp. B510] Length = 291 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 186/298 (62%), Positives = 234/298 (78%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVDKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG ++++P+F Sbjct: 1 MAVLVDKNTKVICQGFTGAQGTFHSEQAIAY-GTKMVGGVTPGKGG----AKHLDLPIFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+T ANASVIYVPP A DAI+E+I+AEIPL+VCITEGIPVLDMVRVK L S Sbjct: 56 TVAEAVEKTGANASVIYVPPPFAADAILEAIDAEIPLVVCITEGIPVLDMVRVKRALNGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPG++TPD CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQ+T Sbjct: 116 ATRLIGPNCPGVITPDECKIGIMPGHIHKRGKIGIVSRSGTLTYEAVAQTTAAGLGQTTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT F+D LELF+ D TE I+M+GEIGG AE + A+F+K G +KP+V Sbjct: 176 IGIGGDPVNGTNFVDSLELFVKDPETEGIIMIGEIGGDAEVKGAEFIKA---SGTRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGAVISGG A+ KI+ MK GI +A SPA +G +++++ Sbjct: 233 GFIAGRTAPPGRRMGHAGAVISGGNDTADFKIDFMKSVGIAVADSPASLGSTMLKVFK 290 >gi|34496531|ref|NP_900746.1| succinyl-CoA synthetase subunit alpha [Chromobacterium violaceum ATCC 12472] gi|34102385|gb|AAQ58751.1| succinyl-CoA synthetase alpha chain [Chromobacterium violaceum ATCC 12472] Length = 294 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 174/299 (58%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+TKVLVQG TGK GTFH EQA L T+VVGG+ P KG + G +PVF Sbjct: 1 MSVLVNKDTKVLVQGFTGKNGTFHAEQA-LKVGTKVVGGVTPGKGGSEHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A +T A+ASVIYVP + A D+I+E++++ + LIVCITEG+P LDM+ VK ++++ Sbjct: 56 TMKDAVRQTQADASVIYVPAAFAKDSILEAVDSGVKLIVCITEGVPTLDMLYVKKAVDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+TP CKIGIMP I G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GVRLIGPNCPGIITPGECKIGIMPWHIHNPGRIGIVSRSGTLTYEAVAQTTALGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID L LF D T++IVM+GEIGG+AEEEAA+F K KP+V Sbjct: 176 IGIGGDPIPGTSHIDALRLFQDDPDTDAIVMIGEIGGTAEEEAAEFAKAYV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP G+ MGHAGA+ISGGKG AE+K A ++AGI SPA IG+++ +LL S Sbjct: 232 GYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFKAFEKAGIAYTRSPAEIGKTMFDLLKS 290 >gi|325981978|ref|YP_004294380.1| succinyl-CoA synthetase, alpha subunit [Nitrosomonas sp. AL212] gi|325531497|gb|ADZ26218.1| succinyl-CoA synthetase, alpha subunit [Nitrosomonas sp. AL212] Length = 291 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 158/299 (52%), Positives = 219/299 (73%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL+++N++V+ QG+TGK G FHT Y V G++P+K G +PV Sbjct: 1 MSILINRNSRVITQGITGKTGQFHTRMCRDYANGNACFVAGVNPRKPGENVEG----IPV 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EA+++T AN SVIYVPP A AI E++EAE+ L++CITEGIPV DM+R + +++ Sbjct: 57 YASVKEAQQQTGANVSVIYVPPPFAAAAIDEAVEAELDLVICITEGIPVRDMIRTRYKMQ 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RLIGPNCPGI+TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q + GLGQS Sbjct: 117 GKKTRLIGPNCPGIITPDEIKIGIMPGYIHKKGRIGVVSRSGTLTYEAVAQLMEMGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDPV G + +DV++LF D+ T++++MVGEIGG+ EE+ A+++KD + KP Sbjct: 177 TCIGIGGDPVNGLKHLDVIQLFNDDDETDAVLMVGEIGGTDEEDCARWVKDHMR----KP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG TAPPG+ MGHAGA+ISGGKG A++K+ M+ GI I +PA +G+ L +L Sbjct: 233 VVGFIAGVTAPPGKRMGHAGAIISGGKGTAQEKLEVMESCGIKITRNPAEMGKLLKSVL 291 >gi|61097981|ref|NP_001012910.1| succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Gallus gallus] gi|53130362|emb|CAG31510.1| hypothetical protein RCJMB04_7e3 [Gallus gallus] Length = 331 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 173/299 (57%), Positives = 227/299 (75%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+ QG TGK GTFH++QA+ Y T +VGG+ P KG G +PVF + Sbjct: 34 NLYINKSTKVICQGFTGKQGTFHSQQALEY-GTNLVGGVSPGKGGKTHLG----LPVFNS 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A+A+VIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL ++ Sbjct: 89 VKEAKEQTGASATVIYVPPPFAAAAINEAIDAEMPLVVCITEGIPQQDMVRVKHRLLRQN 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 149 KTRLVGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSFC 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D TE I+++GEIGG+AEE+AA FLK+ KP+V Sbjct: 209 VGIGGDPFNGTNFIDCLDVFLKDPHTEGIILIGEIGGNAEEDAASFLKENNSGPNAKPVV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 269 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTIHKEFEK 327 >gi|224373251|ref|YP_002607623.1| succinyl-CoA synthetase alpha chain [Nautilia profundicola AmH] gi|223588988|gb|ACM92724.1| succinyl-CoA synthetase alpha chain [Nautilia profundicola AmH] Length = 292 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 158/299 (52%), Positives = 210/299 (70%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+VQG TGK GTFH EQ + Y TQ+VGG+ P KG G PVF Sbjct: 1 MSILVNKDTKVIVQGFTGKEGTFHAEQCMAY-GTQIVGGVTPNKGGMTHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A S+I+VPP+ DA++E+ +A I L V ITEG PV DM+ K +K Sbjct: 56 TVEDAVKATGATVSMIFVPPAFVADAVMEAADAGIELAVIITEGAPVKDMMYAKHYAQKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 IGPNCPGI+T + CKIGIMPG+IF+KG+VG++S+SGTLTYEA Q +EG G +TA Sbjct: 116 GMNTIGPNCPGIITAEECKIGIMPGNIFKKGNVGLISKSGTLTYEASNQVVKEGFGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + +L +F AD TE+IVM+GEIGG E +AA+ +K++ KP+V Sbjct: 176 VGIGGDPIIGLSYKQLLPMFEADPETEAIVMIGEIGGDLEIQAAKLIKEQIS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP G+ MGHAGA+ISG KG A +K+ A++EAG+ + SPA IG ++ + L Sbjct: 232 AFIAGQTAPKGKRMGHAGAIISGSKGTAAEKMAALEEAGVYVVKSPADIGATVAKALKE 290 >gi|124027099|ref|YP_001012419.1| succinyl-CoA synthetase alpha chain [Hyperthermus butylicus DSM 5456] gi|123977793|gb|ABM80074.1| Succinyl-CoA synthetase alpha chain [Hyperthermus butylicus DSM 5456] Length = 293 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 144/300 (48%), Positives = 201/300 (67%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL D+NT+V+VQG+TG+ G+FHT+ + Y T++V G+ P KG G VPV+ Sbjct: 1 MAILADENTRVIVQGITGREGSFHTKLMLEY-GTKIVAGVTPGKGGMEVHG----VPVYD 55 Query: 61 TVAEAKERTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EA E ANAS+++VP A DA+ E+I+A + L+V ITE IPV + +R + Sbjct: 56 TVEEALEEHPDANASIVFVPARFAPDAVYEAIDAGLKLVVVITEHIPVHETMRFVNYARQ 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +IGPNCPGI++P KIGIMPG +F G VGI+SRSGTLTYE + ++ G+GQST Sbjct: 116 RGTVIIGPNCPGIISPGKTKIGIMPGRVFTPGPVGIVSRSGTLTYEIAYALTRSGIGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ G F + +ELF D T+ +V++GEIGG EE AA+ +++ KP+ Sbjct: 176 VVGIGGDPIVGLSFTEAMELFERDPETKVLVLIGEIGGDMEERAARMIEEGR---FTKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V F+AG+TAPPG+ MGHAGA+I G G EDK+ A+++AG +A S + I R + E L Sbjct: 233 VAFIAGRTAPPGKRMGHAGAIIMMGTGRYEDKVRALEKAGARVARSLSEIPRLVKEALEK 292 >gi|300120129|emb|CBK19683.2| Succinyl-CoA Synthetase subunit ? (SCS?) [Blastocystis hominis] Length = 318 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 181/298 (60%), Positives = 230/298 (77%), Gaps = 8/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DKNTKV+ QG+TGK GTFHT+QAI Y T++VGG++PKK + G +P+F++V Sbjct: 24 VWIDKNTKVIGQGITGKNGTFHTQQAIEY-GTKMVGGVNPKKAGSTHLG----LPIFSSV 78 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSS 121 EAK+ T A+A+VIYVPPSGA AI+E++ AEIPLIVCITEGIP DM+RVK ++ +S Sbjct: 79 EEAKKATNADATVIYVPPSGAASAILEAVAAEIPLIVCITEGIPQHDMLRVKDIMKSQSK 138 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 SRLIGPNCPGI+ P CKIGIMPG I +KG +G++SRSGTLTYEAV QT++ GLGQST V Sbjct: 139 SRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGVVSRSGTLTYEAVAQTTKYGLGQSTVV 198 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE F D TE IVM+GEIGG+AEE+AA++LK KP+VG Sbjct: 199 GIGGDPFNGTNFIDCLERFTNDPQTEGIVMIGEIGGTAEEDAAEWLKQYGDPS--KPVVG 256 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAPPGR MGHAGA+ISGGKG A+ K+ AM GI + +PA+IG ++ L+ + Sbjct: 257 FIAGRTAPPGRRMGHAGAIISGGKGTAKAKMEAMTAVGIKVVDTPAQIGEAIYGLMKA 314 >gi|219119890|ref|XP_002180696.1| ligase succinate-coa ligase [Phaeodactylum tricornutum CCAP 1055/1] gi|217408169|gb|EEC48104.1| ligase succinate-coa ligase [Phaeodactylum tricornutum CCAP 1055/1] Length = 309 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 179/297 (60%), Positives = 221/297 (74%), Gaps = 8/297 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKN++V+ QG TGK GTFH+ QAI Y T +VGG+ PKKG G +PVF TV Sbjct: 7 VWVDKNSRVICQGFTGKQGTFHSTQAIDY-GTNMVGGVTPKKGGQEHLG----LPVFNTV 61 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSS 121 EA + +ASVIYVPP A AI+++IEAEI L+VCITEGIP DM RVK L + Sbjct: 62 QEAVDGVQPDASVIYVPPPYAAQAILDAIEAEIGLVVCITEGIPQQDMARVKHALRLQDR 121 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I R G +G++SRSGTLTYEAV+QT+ GLGQST V Sbjct: 122 TRLIGPNCPGIIKPGECKIGIMPGYIHRPGKIGVVSRSGTLTYEAVWQTTVTGLGQSTCV 181 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE F D TE I+M+GEIGGSAEEEAA++LK+ KP+VG Sbjct: 182 GIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAAEWLKEY--GDPNKPVVG 239 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA+I+GGKGGAE+K A++ AG+ ++ SPAR+G +++E +G Sbjct: 240 FIAGLTAPPGRRMGHAGAIIAGGKGGAEEKFQALESAGVHVSRSPARLGATMLEAMG 296 >gi|152990586|ref|YP_001356308.1| succinyl-CoA synthase, alpha subunit [Nitratiruptor sp. SB155-2] gi|151422447|dbj|BAF69951.1| succinyl-CoA synthase, alpha subunit [Nitratiruptor sp. SB155-2] Length = 290 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 161/299 (53%), Positives = 215/299 (71%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+VQG TGK GTFH+EQ I Y TQ+VGG+ P KG ++ PVF Sbjct: 1 MSILVNKDTKVIVQGFTGKEGTFHSEQCIEY-GTQIVGGVTPGKGGQTH----LDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A S+I+VPP+ DA++E+ +A I L V ITEG PV DM+ K K Sbjct: 56 TVKEAVDATGATVSMIFVPPAFTADAVMEAADAGIELAVIITEGAPVKDMMYAKMYATKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + IGPNCPGI+T + CKIGIMPG IF+KG VG++S+SGTLTYEA Q +EG G +TA Sbjct: 116 GMKTIGPNCPGIITAEECKIGIMPGFIFKKGPVGLISKSGTLTYEASNQVVKEGYGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + +L +F AD TE+IVM+GEIGG+ E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLSYKQLLPMFEADPETEAIVMIGEIGGTLEIEAAEFIKENI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP G+ MGHAGA+ISGG+G A++K++A+ AG+ + SPA IG+++ ++LG Sbjct: 232 AFIAGQTAPKGKRMGHAGAIISGGQGTAQEKMDALAAAGVHVVKSPADIGKTVAKVLGK 290 >gi|300176826|emb|CBK25395.2| Succinyl-CoA Synthetase subunit ? (SCS?) [Blastocystis hominis] Length = 318 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 181/298 (60%), Positives = 230/298 (77%), Gaps = 8/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DKNTKV+ QG+TGK GTFHT+QAI Y T++VGG++PKK + G +P+F++V Sbjct: 24 VWIDKNTKVIGQGITGKNGTFHTQQAIEY-GTKMVGGVNPKKAGSTHLG----LPIFSSV 78 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSS 121 EAK+ T A+A+VIYVPPSGA AI+E++ AEIPLIVCITEGIP DM+RVK ++ +S Sbjct: 79 EEAKKATNADATVIYVPPSGAASAILEAVAAEIPLIVCITEGIPQHDMLRVKDIMKSQSK 138 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 SRLIGPNCPGI+ P CKIGIMPG I +KG +G++SRSGTLTYEAV QT++ GLGQST V Sbjct: 139 SRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGVVSRSGTLTYEAVAQTTKYGLGQSTVV 198 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE F D TE IVM+GEIGG+AEE+AA++LK KP+VG Sbjct: 199 GIGGDPFNGTNFIDCLERFTNDPQTEGIVMIGEIGGTAEEDAAEWLKQYGDPS--KPVVG 256 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAPPGR MGHAGA+ISGGKG A+ K+ AM GI + +PA+IG ++ L+ + Sbjct: 257 FIAGRTAPPGRRMGHAGAIISGGKGTAKAKMEAMTAVGIKVVDTPAQIGEAIYGLMKA 314 >gi|157835434|pdb|2NU9|A Chain A, C123at Mutant Of E. Coli Succinyl-Coa Synthetase Orthorhombic Crystal Form gi|157835436|pdb|2NU9|D Chain D, C123at Mutant Of E. Coli Succinyl-Coa Synthetase Orthorhombic Crystal Form gi|157835438|pdb|2NU9|F Chain F, C123at Mutant Of E. Coli Succinyl-Coa Synthetase Orthorhombic Crystal Form gi|157835440|pdb|2NU9|H Chain H, C123at Mutant Of E. Coli Succinyl-Coa Synthetase Orthorhombic Crystal Form Length = 288 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 170/297 (57%), Positives = 215/297 (72%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 SIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF T Sbjct: 1 SILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFNT 55 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 VREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPN PG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST V Sbjct: 116 VRMIGPNTPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+VG Sbjct: 176 GIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MG AGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 YIAGVTAPKGKRMGXAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 288 >gi|224587121|gb|ACN58607.1| Succinyl-CoA ligase subunit alpha, mitochondrial precursor [Salmo salar] Length = 325 Score = 308 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 173/299 (57%), Positives = 227/299 (75%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +DK+TKV+ QG TGK GTFH++QAI Y +++VGG+ P KG G VPVF + Sbjct: 28 NLYIDKDTKVICQGFTGKQGTFHSQQAIDY-GSRLVGGVSPGKGGRTHLG----VPVFNS 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA+E T A A+VIYVPP AG AIIE+I+A +PL+VCITEGIP DMV+VK +L +S Sbjct: 83 VKEAREGTGAEATVIYVPPPFAGAAIIEAIDAGMPLVVCITEGIPQQDMVKVKHKLLRQS 142 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 143 TTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 202 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D T+ I+++GEIGG+AEE AA +LK KP+V Sbjct: 203 IGIGGDPFNGTNFIDCLEVFLQDPKTDGIILIGEIGGNAEENAADYLKQHNSGANAKPVV 262 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A+++AG+ ++ SPA++G ++ + Sbjct: 263 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQQAGVVVSMSPAQLGSTMFKEFEK 321 >gi|124515901|gb|EAY57410.1| Succinyl-CoA synthetase, alpha subunit [Leptospirillum rubarum] Length = 305 Score = 308 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 172/304 (56%), Positives = 226/304 (74%), Gaps = 14/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD++T+V+VQG+TGK G++H Y T+VVGG+ P KG T G PV+ Sbjct: 1 MSILVDRSTRVIVQGITGKEGSYHATACREY-GTKVVGGVTPGKGGTTHEG----FPVWN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 +V +A+E + S+I+VPP+ A DAI+ESI A+IPLIVCITEGIPVLDMVRV+ L Sbjct: 56 SVFDAREAENPDVSLIFVPPAFAADAILESIAADIPLIVCITEGIPVLDMVRVRRVLDSR 115 Query: 118 --EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 + RLIGPNCPGI+TPD KIGIMPG I ++G VG++SRSGTLTYEAV+Q +Q GL Sbjct: 116 NEQGKPIRLIGPNCPGIITPDGAKIGIMPGYIHKRGRVGVVSRSGTLTYEAVWQLTQLGL 175 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G+ST VGIGGDPV+G FIDVLE+F +D TE++VM+GEIGG EE+AA F A+ Sbjct: 176 GESTCVGIGGDPVRGLNFIDVLEMFESDPETEAVVMIGEIGGEDEEKAAVF----AQTKM 231 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VGF+AG TAPPGR MGHAGA++SGGKG A DK+ ++ G+ + +P++IG+++ + Sbjct: 232 TKPVVGFIAGLTAPPGRRMGHAGAIVSGGKGTARDKMAFLESHGVRVVDNPSQIGKTVAD 291 Query: 296 LLGS 299 +L S Sbjct: 292 VLAS 295 >gi|170571090|ref|XP_001891596.1| succinyl-CoA ligase [GDP-forming] alpha-chain, mitochindrial, putative [Brugia malayi] gi|158603822|gb|EDP39602.1| succinyl-CoA ligase [GDP-forming] alpha-chain, mitochindrial, putative [Brugia malayi] Length = 325 Score = 308 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 167/297 (56%), Positives = 221/297 (74%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV++QG TGK TFH +Q I Y T VVGG+ P K T + PVF T Sbjct: 30 ALRINKDTKVIIQGFTGKQATFHGQQMINY-NTNVVGGVSPNKAGTMH----LERPVFGT 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA+E T A+ASVIYVP A AI E+I+AEIPL+VC+TEG+P DMV+V+ RL +++ Sbjct: 85 VKEAREATGADASVIYVPARFAAKAIDEAIDAEIPLVVCVTEGVPQQDMVKVRNRLMKQN 144 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P+ CKIGIMPG I RKG++G++SRSGTLTYEAV QT+ GLGQ+ Sbjct: 145 KTRLLGPNCPGIICPEECKIGIMPGHIHRKGTIGVVSRSGTLTYEAVHQTTVCGLGQTLC 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+++GEIGG EE+AA+FLK+ KP+V Sbjct: 205 VGIGGDPFNGTNFIDCLDIFLRDPQTKGIILIGEIGGQDEEKAAEFLKENNSGSNAKPVV 264 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAPPGR MGHAGA+I+GGKG A DKI A+K G+ ++ SPA++G + + L Sbjct: 265 SFIAGQTAPPGRRMGHAGAIIAGGKGTAADKIEALKSVGVLVSASPAQMGAMMAKAL 321 >gi|145533787|ref|XP_001452638.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124420337|emb|CAK85241.1| unnamed protein product [Paramecium tetraurelia] Length = 312 Score = 308 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 170/298 (57%), Positives = 219/298 (73%), Gaps = 8/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + V+K+TKV+ QG+TG GTF TEQA+ Y T++VGG+ PKK + G +PVF Sbjct: 18 VWVNKHTKVICQGITGNQGTFQTEQALNY-FTKMVGGVSPKKAGSTHLG----LPVFKDC 72 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSS 121 EAK T +ASVIYVPP A AIIE+IEA+I L+V IT+GIP DM++VK L +S Sbjct: 73 QEAKSATGCDASVIYVPPPTAASAIIEAIEAQIGLVVVITDGIPQHDMIKVKHALRSQSV 132 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +R+IGPNCPGI+ P+ CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQST V Sbjct: 133 TRVIGPNCPGIIKPNECKIGIMPGYIHQNGKIGIVSRSGTLTYEAVDQTTRAGLGQSTVV 192 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FIDVLE F+ D TE IVM+GEIGG EE AA ++K + KP+VG Sbjct: 193 GIGGDPFNGTNFIDVLERFMVDPETEGIVMIGEIGGENEEMAADWIKKNN--PKNKPVVG 250 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPP R MGHAGA++S GKG A +KI A+++AGI + SPA+IG++++E++ Sbjct: 251 FIAGITAPPERRMGHAGAIVSKGKGSAPEKIRALEQAGIRVVKSPAQIGKTMLEVMKE 308 >gi|238231573|ref|NP_001153970.1| succinate-CoA ligase GDP-forming alpha subunit [Oncorhynchus mykiss] gi|223049433|gb|ACM80356.1| succinate-CoA ligase GDP-forming alpha subunit [Oncorhynchus mykiss] Length = 324 Score = 308 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 173/299 (57%), Positives = 227/299 (75%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +DK+TKV+ QG TGK GTFH++QAI Y +++VGG+ P KG G VPVF + Sbjct: 27 NLYIDKDTKVICQGFTGKQGTFHSQQAIDY-GSRLVGGVSPGKGGRTHLG----VPVFNS 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA+E T A A+VIYVPP AG AIIE+I+A +PL+VCITEGIP DMV+VK +L +S Sbjct: 82 VKEAREGTGAEATVIYVPPPFAGAAIIEAIDAGMPLVVCITEGIPQQDMVKVKHKLLRQS 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 142 TTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D T+ I+++GEIGG+AEE AA +LK KP+V Sbjct: 202 IGIGGDPFNGTNFIDCLEVFLQDPKTDGIILIGEIGGNAEENAADYLKQHNSGANAKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A+++AG+ ++ SPA++G ++ + Sbjct: 262 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQQAGVVVSMSPAQLGSTMFKEFEK 320 >gi|297266410|ref|XP_001082705.2| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Macaca mulatta] Length = 382 Score = 308 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 179/295 (60%), Positives = 227/295 (76%), Gaps = 6/295 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 61 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 115 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E++EAEIPL+VCITEGIP DMVRVK +L + Sbjct: 116 KEAKEQTGATASVIYVPPPFAAAAINEAVEAEIPLVVCITEGIPQQDMVRVKHKLLRQGK 175 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT++ GLGQS V Sbjct: 176 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTEVGLGQSLCV 235 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 236 GIGGDPFNGTDFIDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 295 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ ++ Sbjct: 296 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKV 350 >gi|313238969|emb|CBY13957.1| unnamed protein product [Oikopleura dioica] Length = 330 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 169/297 (56%), Positives = 220/297 (74%), Gaps = 7/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 + K +V+VQG TGK GT+H+EQAI Y T VVGG+ P KG G VPVF + Sbjct: 33 NRRFSKVFQVIVQGFTGKQGTYHSEQAIAY-GTHVVGGVTPGKGGQEHLG----VPVFNS 87 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VA+A++ T A+A+VIYVPP A +AI+++IEAE+PL VCITEGIP DMVRVK+ L ++ Sbjct: 88 VADARKGTGADATVIYVPPKFAANAILDAIEAEVPLAVCITEGIPAQDMVRVKSALIQQD 147 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI++P+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT++ G GQ+ Sbjct: 148 KTRLIGPNCPGIISPEQCKIGIMPGHIHQRGKIGIVSRSGTLTYEAVHQTTETGFGQTLC 207 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKPI 239 +GIGGDP GT FID LE+FL D T+ I+M+GEIGG AEE+AA++L++ + KP+ Sbjct: 208 IGIGGDPFNGTNFIDCLEVFLNDPDTKGIMMIGEIGGDAEEQAAEYLREHNFSQANPKPV 267 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 V F+AG TAPPGR MGHAGA+ISGGKG AE K A+ + G+ SPA++GR +V Sbjct: 268 VAFIAGSTAPPGRRMGHAGAIISGGKGTAEAKFAALDDVGVVTTNSPAQMGRCMVRA 324 >gi|78187602|ref|YP_375645.1| succinyl-CoA ligase, alpha subunit [Chlorobium luteolum DSM 273] gi|78167504|gb|ABB24602.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Chlorobium luteolum DSM 273] Length = 299 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 167/304 (54%), Positives = 229/304 (75%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T+++VQG+TG GTFHT Q + Y T VV G+ P KG + G + + Sbjct: 1 MSVLVNKDTRLVVQGITGGEGTFHTSQILEY-GTNVVAGVTPGKGGVLYHGNDRDKFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV +A E+ ANA+VI+VP + A DAI+E+ +A + +I+CITEGIPV DM++ A Sbjct: 60 VPVFNTVKDAVEKAEANATVIFVPAAFAADAIMEAADAGLKVIICITEGIPVNDMMKAYA 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + L+GPNCPG++TP KIGIMPG I +KG++G++SRSGTLTYEAV Q + GL Sbjct: 120 FVQEKGAVLVGPNCPGVITPGEAKIGIMPGFIHKKGTIGVVSRSGTLTYEAVHQLTSVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT FID ++LF D+ TE ++M+GEIGGSAEEEAA++++ Sbjct: 180 GQSTCIGIGGDPIIGTRFIDAVKLFAKDDETEGLIMIGEIGGSAEEEAAEYIRKY----F 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG AE+KI AM+ AGI + SPA IG ++++ Sbjct: 236 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAEEKIKAMEAAGIHVVDSPADIGEAMLK 295 Query: 296 LLGS 299 LG Sbjct: 296 ALGR 299 >gi|114769290|ref|ZP_01446916.1| succinyl-CoA synthetase alpha subunit [alpha proteobacterium HTCC2255] gi|114550207|gb|EAU53088.1| succinyl-CoA synthetase alpha subunit [alpha proteobacterium HTCC2255] Length = 299 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 208/299 (69%), Positives = 253/299 (84%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-TGGNVNVPVF 59 MSIL++K TK+LVQGLTGK GTFHTEQA+ Y T++VGG HPKKG T W + +P+F Sbjct: 1 MSILINKETKILVQGLTGKTGTFHTEQALSYFDTKMVGGTHPKKGGTNWKSTNGKELPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V E ++ T A ASVIYVPP+GA AI E+I+A I LI CITEGIPV+DMVRVK +LE Sbjct: 61 ASVEEGRDATGATASVIYVPPAGAAAAIEEAIDAGINLITCITEGIPVMDMVRVKNKLEN 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S+SRLIG NCPG++TP+ CKIGIMPGSIF+KGSVG+LSRSGTLTYEAVFQT+ GLGQS+ Sbjct: 121 SNSRLIGGNCPGLMTPNECKIGIMPGSIFKKGSVGVLSRSGTLTYEAVFQTTNAGLGQSS 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDP+KGTEFID+LELFLAD+ T+SI+M+GEIGGSAEEEAAQFL DEAK+GRKKPI Sbjct: 181 AVGIGGDPIKGTEFIDILELFLADKETQSIIMIGEIGGSAEEEAAQFLIDEAKKGRKKPI 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAPPGR MGHAGA+++GGKG A KI AM++AGI +A SPA +G ++++ +G Sbjct: 241 AGFIAGVTAPPGRRMGHAGAIVAGGKGDAGSKIEAMRQAGIVVADSPAGLGEAVLKAIG 299 >gi|300176246|emb|CBK23557.2| Succinyl-CoA Synthetase subunit ? (SCS?) [Blastocystis hominis] Length = 318 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 181/298 (60%), Positives = 229/298 (76%), Gaps = 8/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DKNTKV+ QG+TGK GTFHT+QAI Y T++VGG++PKK + G +P+F +V Sbjct: 24 VWIDKNTKVIGQGITGKNGTFHTQQAIEY-GTKMVGGVNPKKAGSTHLG----LPIFASV 78 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSS 121 EAK+ T A+A+VIYVPPSGA AI+E++ AEIPLIVCITEGIP DM+RVK ++ +S Sbjct: 79 EEAKKATNADATVIYVPPSGAASAILEAVAAEIPLIVCITEGIPQHDMLRVKDIMKSQSK 138 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 SRLIGPNCPGI+ P CKIGIMPG I +KG +G++SRSGTLTYEAV QT++ GLGQST V Sbjct: 139 SRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGVVSRSGTLTYEAVAQTTKYGLGQSTVV 198 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE F D TE IVM+GEIGG+AEE+AA++LK KP+VG Sbjct: 199 GIGGDPFNGTNFIDCLERFTNDPQTEGIVMIGEIGGTAEEDAAEWLKQYGDPS--KPVVG 256 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAPPGR MGHAGA+ISGGKG A+ K+ AM GI + +PA+IG ++ L+ + Sbjct: 257 FIAGRTAPPGRRMGHAGAIISGGKGTAKAKMEAMTAVGIKVVDTPAQIGEAIYGLMKA 314 >gi|163783580|ref|ZP_02178570.1| succinyl-CoA ligase alpha subunit [Hydrogenivirga sp. 128-5-R1-1] gi|159881200|gb|EDP74714.1| succinyl-CoA ligase alpha subunit [Hydrogenivirga sp. 128-5-R1-1] Length = 305 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 166/302 (54%), Positives = 223/302 (73%), Gaps = 11/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVDKNTKV+VQG+TGK G+FH Q Y TQVV G+ P K G +PVF Sbjct: 1 MAILVDKNTKVVVQGITGKEGSFHATQCKAY-GTQVVAGVTPGKAGQEVEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV +A + T AN S+I+VP A DAI+E++++ I L+VCITEGIPV DM+ VK ++K Sbjct: 56 TVEDAVKETGANCSLIFVPAPFAADAIVEALDSGIELVVCITEGIPVKDMMMVKDYMKKA 115 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +++LIGPNCPG++TP K+GIMPG IFR+G VGI+SRSGTLTYEA +Q +Q G+GQ+ Sbjct: 116 YPNAKLIGPNCPGLITPGEAKVGIMPGHIFRRGKVGIVSRSGTLTYEAAYQLTQLGMGQT 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV G DV+ELF D TE+I+M+GEIGG+AEEEAA+F++ KP Sbjct: 176 TAVGIGGDPVHGLSHRDVIELFNEDPETEAILMIGEIGGTAEEEAAEFIESNV----DKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + ++AG TAPPG+ MGHAGA+I GGKG A+ K++A+++AG + +PA+IG ++ ++LG Sbjct: 232 VFAYIAGITAPPGKRMGHAGAIIMGGKGTAQAKMSALEKAGAYVIDNPAKIGETVAKILG 291 Query: 299 SL 300 L Sbjct: 292 VL 293 >gi|283782077|ref|YP_003372832.1| succinyl-CoA synthetase, alpha subunit [Pirellula staleyi DSM 6068] gi|283440530|gb|ADB18972.1| succinyl-CoA synthetase, alpha subunit [Pirellula staleyi DSM 6068] Length = 293 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 165/299 (55%), Positives = 221/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNT+V+ QG+TGKAG FHT+ Y T +VGG+ P K G +PVF Sbjct: 1 MSILINKNTRVICQGITGKAGAFHTKGCKEY-GTNMVGGVTPGKSGETVEG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T ANA++I+VP + DAI+E+++A I +I ITEG+PV+DMVRV + S Sbjct: 56 TVKEAVDKTGANATMIFVPAAYTADAILEALDAGIEVIAAITEGVPVIDMVRVYELVRAS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++TP CKIGIMPG I + G+VGI+SRSGTLTYEAV+QT+ GLGQST Sbjct: 116 KSVLIGPNCPGLITPGECKIGIMPGYIHKPGNVGIMSRSGTLTYEAVWQTTGLGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ GT +ID+ +L+ AD TE+I+M+GEIGG+AEEEAA ++K KP+ Sbjct: 176 VGLGGDPIVGTNYIDLFKLYEADPQTEAILMIGEIGGTAEEEAAAYVKAHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAPPGR MGHAGA+ISGGKG A +K+ A+++AGI +A SPA +G ++ + Sbjct: 232 AFIAGRTAPPGRRMGHAGAIISGGKGTAAEKVAALEDAGIEVADSPATMGEAVQRAIAK 290 >gi|328849709|gb|EGF98884.1| hypothetical protein MELLADRAFT_45876 [Melampsora larici-populina 98AG31] Length = 340 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 167/303 (55%), Positives = 224/303 (73%), Gaps = 10/303 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + KNTKV+ QG TGK T+H ++A+ Y T+ VGG+ PKK + G +PVF + Sbjct: 39 NLRIHKNTKVICQGFTGKTATYHCKEALDY-GTKFVGGVSPKKAGQHHLG----LPVFGS 93 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A T +A+VIYVPP A DA+IE++E EI LIVCITEGIP D VR+ L+ +S Sbjct: 94 VKDAVRETRPDATVIYVPPPFAADAVIEAVENEIGLIVCITEGIPQQDEVRIAQVLKSQS 153 Query: 121 SSRLIGPNCPGILTP---DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 SRL+GPNCPGI++P CKIGIMP +IF G +G++SRSGTLTYEAV QT++ GLGQ Sbjct: 154 KSRLVGPNCPGIMSPDVGGGCKIGIMPSNIFSPGCIGVVSRSGTLTYEAVDQTTKVGLGQ 213 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK-RGRK 236 + VGIGGDP GT+ IDVL+ F+ D+AT+ IV++GEIGGS EEEAA+FLK K R Sbjct: 214 TLCVGIGGDPFPGTQHIDVLKAFMEDDATKGIVLIGEIGGSMEEEAAEFLKQYNKTRSVP 273 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ F+AG+TAPPGR MGHAGA+ISGGKG AEDK+ A++EAG ++ SPA++G +++ Sbjct: 274 KPVISFIAGRTAPPGRRMGHAGAIISGGKGKAEDKVKALEEAGAVVSDSPAKLGALMLKA 333 Query: 297 LGS 299 + + Sbjct: 334 MKA 336 >gi|225711092|gb|ACO11392.1| Succinyl-CoA ligase subunit alpha, mitochondrial precursor [Caligus rogercresseyi] Length = 327 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 229/299 (76%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++++ K++KV+ QG TGK GTFH++QAI Y T +VGG+ PKK T G +PVF + Sbjct: 30 NMMLTKDSKVICQGFTGKQGTFHSQQAIDY-GTNMVGGVSPKKAGTTHLG----LPVFGS 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA +T A+A+VIYVPP GA AI+E++EAEI LIVCITEGIP DMVRVK L ++S Sbjct: 85 VKEAVAKTKADATVIYVPPPGAAAAILEAMEAEIGLIVCITEGIPQQDMVRVKDALNKQS 144 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT+Q GLGQ+ Sbjct: 145 KSRLIGPNCPGIIAPNKCKIGIMPGHIHQEGCIGVVSRSGTLTYEAVHQTTQVGLGQTLC 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+M+GEIGG+AEE+AA++L++ KP+V Sbjct: 205 VGIGGDPFNGTNFIDCLDIFLQDPKTKGIIMIGEIGGAAEEKAAEYLQEHNSGPNMKPVV 264 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I GGKG A+ KI A++ AG+ + PSPA++G +LV+L+ Sbjct: 265 SFIAGVTAPPGRRMGHAGAIIFGGKGTAQTKIAALEAAGVAVTPSPAQMGTTLVKLMKD 323 >gi|90076498|dbj|BAE87929.1| unnamed protein product [Macaca fascicularis] Length = 346 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 226/298 (75%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E++EAEIPL+VCITEGIP DMVRVK +L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAINEAVEAEIPLVVCITEGIPQQDMVRVKHKLLRQGK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT++ GLGQS V Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTEVGLGQSLCV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 225 GIGGDPFNGTDFIDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEK 342 >gi|157835422|pdb|2NU6|A Chain A, C123aa Mutant Of E. Coli Succinyl-Coa Synthetase gi|157835424|pdb|2NU6|D Chain D, C123aa Mutant Of E. Coli Succinyl-Coa Synthetase Length = 288 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 170/297 (57%), Positives = 215/297 (72%), Gaps = 9/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 SIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF T Sbjct: 1 SILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFNT 55 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 VREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPN PG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST V Sbjct: 116 VRMIGPNAPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+VG Sbjct: 176 GIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MG AGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 YIAGVTAPKGKRMGXAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 288 >gi|194866162|ref|XP_001971787.1| GG15160 [Drosophila erecta] gi|190653570|gb|EDV50813.1| GG15160 [Drosophila erecta] Length = 328 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 172/300 (57%), Positives = 230/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLNGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+ T +A+VIYVPP GA AIIE+++AEIPLIVCITEG+P DMV+VK L +S Sbjct: 86 VAEAKKATDPHATVIYVPPPGAAAAIIEALDAEIPLIVCITEGVPQHDMVKVKHALISQS 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLTEYNSGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 266 SFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKEMKRL 325 >gi|195491498|ref|XP_002093588.1| succinyl coenzyme A synthetase alpha subunit [Drosophila yakuba] gi|194179689|gb|EDW93300.1| succinyl coenzyme A synthetase alpha subunit [Drosophila yakuba] Length = 328 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 172/300 (57%), Positives = 230/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLNGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+ T +A+VIYVPP GA AIIE+++AEIPLIVCITEG+P DMV+VK L +S Sbjct: 86 VAEAKKATDPHATVIYVPPPGAAAAIIEALDAEIPLIVCITEGVPQHDMVKVKHALISQS 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLTEYNSGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 266 SFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKEMKRL 325 >gi|320103225|ref|YP_004178816.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Isosphaera pallida ATCC 43644] gi|319750507|gb|ADV62267.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Isosphaera pallida ATCC 43644] Length = 294 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 169/301 (56%), Positives = 218/301 (72%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+ T+++ QG+TGK+G FH+EQ Y T++VGG+ P KG G +VPVF Sbjct: 1 MSILVNAETRLICQGITGKSGAFHSEQCRAY-GTKLVGGVTPGKGGQTTLG---DVPVFD 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 + EA + ANA++I+VPPSGA DAI+E+ +A I LIV ITEGIPVLDM R A L+ Sbjct: 57 SCHEAVAKVGANATMIFVPPSGAADAILEAADAGIALIVAITEGIPVLDMARAVAYLQAH 116 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 RLIGPNCPG++TP CKIGIMPG I + G VG++SRSGTLTYEAV+Q + G+GQS Sbjct: 117 HPQVRLIGPNCPGVITPGQCKIGIMPGYIHQPGRVGVVSRSGTLTYEAVWQLTTLGIGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV GT F++VL +F D T++++M+GEIGG AEE AA F+K G KP Sbjct: 177 TCVGIGGDPVNGTSFVEVLRMFQEDPDTDAVIMMGEIGGDAEERAAAFVK---SGGFTKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + F+AG+TAPPG+ MGHAGA+ISGG G A DKI A++ AGI +A SPA +G +L +L Sbjct: 234 LAAFIAGQTAPPGKRMGHAGAIISGGSGKASDKIAALEAAGIKVARSPADMGTTLQSVLN 293 Query: 299 S 299 + Sbjct: 294 A 294 >gi|195441492|ref|XP_002068543.1| GK20526 [Drosophila willistoni] gi|194164628|gb|EDW79529.1| GK20526 [Drosophila willistoni] Length = 328 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 171/300 (57%), Positives = 230/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF T Sbjct: 31 NLKLNGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAT 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+ T +A+VIYVPP GA AI+E+++AEIPLIVCITEG+P DMV+VK L ++ Sbjct: 86 VAEAKKATDPHATVIYVPPPGAAAAILEALDAEIPLIVCITEGVPQHDMVKVKHALISQN 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPDTKGIILIGEIGGVAEEKAADYLTEFNTGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 266 SFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKEMKRL 325 >gi|289548927|ref|YP_003473915.1| succinyl-CoA synthetase subunit alpha [Thermocrinis albus DSM 14484] gi|289182544|gb|ADC89788.1| succinyl-CoA synthetase, alpha subunit [Thermocrinis albus DSM 14484] Length = 295 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 168/300 (56%), Positives = 225/300 (75%), Gaps = 11/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+KNT+V+VQG+TGK G+FH Q Y TQVV G+ P KG ++PVF Sbjct: 1 MAILVNKNTRVVVQGITGKEGSFHALQCKAY-GTQVVAGVTPGKGGQKVE----DIPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T AN S+I+VPP+ A DAI+E+++A I L+VCITEGIPV DM+ VK + K+ Sbjct: 56 TVDEAVKETQANCSLIFVPPAFAADAIVEALDAGIELVVCITEGIPVRDMLMVKHYMLKN 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +++LIGPNCPG++TP K+GIMPG IF +GSVGI+SRSGTLTYEA +Q ++ G+GQS Sbjct: 116 YPNAKLIGPNCPGVITPGEAKVGIMPGHIFTRGSVGIVSRSGTLTYEAAYQLTKMGIGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV G DV+ LF D T++I+M+GEIGG+AEEEAA+++ KKP Sbjct: 176 TAVGIGGDPVHGLSHKDVIALFNEDPETQAILMIGEIGGTAEEEAAEYIASYV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + ++AG TAPPGR MGHAGA+ISGGKG A+ K+ A++EAG+ + +PA IG+++ E+LG Sbjct: 232 VFAYIAGITAPPGRRMGHAGAIISGGKGTAQAKMEALREAGVHVIENPAFIGKTVAEVLG 291 >gi|153806392|ref|ZP_01959060.1| hypothetical protein BACCAC_00655 [Bacteroides caccae ATCC 43185] gi|149131069|gb|EDM22275.1| hypothetical protein BACCAC_00655 [Bacteroides caccae ATCC 43185] Length = 322 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 147/296 (49%), Positives = 211/296 (71%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+++VQG+TG+ G FH + Y T VVGG P KG + G +PVF Sbjct: 1 MSILIDKSTRLIVQGITGRDGLFHARKMKEY-GTNVVGGTSPGKGGSDANG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA E+T AN S+I+VP A DAI+E+ +A I LIVCI EGIP LD+++ +++ Sbjct: 56 TMYEAVEQTQANTSIIFVPARFAADAIMEAADAGIQLIVCIAEGIPTLDVIKAHQFIKQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPG+++P +GI+PG +F+KG+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAILVGPNCPGLISPGKSMVGILPGQVFQKGNVGVISRSGTLTYEIVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F ++LE+F D TE+IV++GEIGG+AEE+AA+++++ KP+V Sbjct: 176 IGIGGDPVVGLHFRELLEMFQNDTETEAIVLIGEIGGNAEEQAAEYIRNHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 F+AG++AP G+ MGHAGA+ISG G A++KI A++ AGI +A P+ I L Sbjct: 232 AFIAGQSAPLGKQMGHAGAIISGTSGSAKEKIEALEAAGIQVAQEPSDIPALLKAA 287 >gi|163792308|ref|ZP_02186285.1| succinyl-CoA synthetase subunit alpha [alpha proteobacterium BAL199] gi|159182013|gb|EDP66522.1| succinyl-CoA synthetase subunit alpha [alpha proteobacterium BAL199] Length = 291 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 189/297 (63%), Positives = 238/297 (80%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSVLVDKNTKVICQGFTGSQGTFHSEQAIKY-GTKIVGGVTPGKGGQSHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T ANASVIYVPP A D+I+E+I+AE+PL++CITEGIPVLDM++VK L + Sbjct: 56 TVHEAVAKTGANASVIYVPPPFAADSILEAIDAELPLVICITEGIPVLDMLKVKRSLSGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TPD+CKIGIMPG I ++G +GI+S+SGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLIGPNCPGVITPDACKIGIMPGHIHKRGKIGIVSKSGTLTYEAVAQTTAAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVLE+FLAD+ T+ I+M+GEIGGSAEEEAA+FLK KKP+ Sbjct: 176 VGIGGDPVNGTSFIDVLEMFLADDETQGIIMIGEIGGSAEEEAAEFLK---TSKVKKPVA 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPGR MGHAGA+I+GGKGGA+DK+ AM+ AGI ++ SPA++G +++ + Sbjct: 233 GFIAGVTAPPGRRMGHAGAIIAGGKGGADDKMEAMRAAGIKVSASPAKLGETMLAAI 289 >gi|195953299|ref|YP_002121589.1| succinyl-CoA synthetase, alpha subunit [Hydrogenobaculum sp. Y04AAS1] gi|195932911|gb|ACG57611.1| succinyl-CoA synthetase, alpha subunit [Hydrogenobaculum sp. Y04AAS1] Length = 291 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 165/300 (55%), Positives = 217/300 (72%), Gaps = 11/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG+TGK G+FH Q Y TQVV G+ P K G +PVF Sbjct: 1 MSILVNKNTKVVVQGITGKEGSFHAIQCKNY-GTQVVAGVTPGKEGIEVEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A + T AN S+I+VPP A DAI+E+ +A I LI+CITEGIPV DM+ VK L+K+ Sbjct: 56 TVENAVKNTGANCSLIFVPPPFAADAIVEAADAGIELIICITEGIPVKDMIPVKYYLKKN 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +++LIGPNCPG +TP K+GIMPG IF+KG+VGI+SRSGTLTYEA FQ S +GQS Sbjct: 116 YPNTKLIGPNCPGAITPQEAKVGIMPGHIFKKGNVGIVSRSGTLTYEAAFQLSNLNIGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +A+GIGGDPV G DV+ +F D+ T++I+M+GEIGG++EEEAA+++ KKP Sbjct: 176 SAIGIGGDPVHGLSHKDVVAMFNEDQETKAILMIGEIGGTSEEEAAEYIASNV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + ++AG TAPPG+ MGHAGA+ISGGKG AE K+ A+KEA + + +PA IG+ + + L Sbjct: 232 VFAYIAGITAPPGKRMGHAGAIISGGKGTAESKMKALKEANVTVIENPAFIGKVIADALS 291 >gi|288929100|ref|ZP_06422946.1| succinyl-CoA synthase, alpha subunit [Prevotella sp. oral taxon 317 str. F0108] gi|288330084|gb|EFC68669.1| succinyl-CoA synthase, alpha subunit [Prevotella sp. oral taxon 317 str. F0108] Length = 292 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 145/299 (48%), Positives = 206/299 (68%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNT+++VQG+TG+ G FH + Y T VVGG P K +G +PVF Sbjct: 1 MSILINKNTRLIVQGITGRDGGFHATKMKAY-GTNVVGGTSPGKAGQEVSG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T AN SVI+VP + A DA++E+ +A I LI+CITEG+P LD+V+ + + Sbjct: 56 TVRDAVEATQANTSVIFVPAAFAKDAMMEAADAGIQLIICITEGVPTLDVVQAYNYIHQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++LIGPNCPG+++P+ +GIMP +IF+KG G++SRSGTLTYE V+ +Q G+GQSTA Sbjct: 116 GAKLIGPNCPGLISPEESMVGIMPTNIFKKGGTGVISRSGTLTYEVVYNLTQNGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ G F D+LE+F D T+SI ++GEIGG AEE AA+++K KP+ Sbjct: 176 VGVGGDPIVGLYFQDLLEMFENDPETDSIAIIGEIGGDAEERAAEYIKAHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F++G+ AP G+ MGHAGA+IS G G A++K+ A + AGI +A + I L + L + Sbjct: 232 AFISGREAPKGKQMGHAGAIISSGSGTAKEKVAAFEAAGIPVARETSEIPMLLKKQLEA 290 >gi|87308499|ref|ZP_01090640.1| putative succinyl-CoA synthetase alpha subunit [Blastopirellula marina DSM 3645] gi|87289056|gb|EAQ80949.1| putative succinyl-CoA synthetase alpha subunit [Blastopirellula marina DSM 3645] Length = 291 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 166/299 (55%), Positives = 225/299 (75%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+ QG+TG+ G FHT+ + Y T++VGG+ P KG G +PV+ Sbjct: 1 MSILINKDTKVICQGITGRVGGFHTKGCLEY-GTKMVGGVTPGKGGQQVEG----LPVWD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A++I+VPP+G DAI+E+++A+I +I+ ITEG+PVLDMV V ++ S Sbjct: 56 TVEEAVAATGCEATMIFVPPAGTADAILEALDAKIKVIIAITEGVPVLDMVPVYEKVRAS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++TP+ CKIGIMPG I +KG VG++SRSGTLTYEAV+Q + GLGQST Sbjct: 116 DSVLIGPNCPGVITPEECKIGIMPGYIHKKGPVGVMSRSGTLTYEAVWQLTSLGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ GT FID+L++F AD ATE+I+M+GEIGG+AEEEAA+F+K KP+ Sbjct: 176 VGLGGDPIVGTSFIDLLKMFQADGATEAIMMMGEIGGTAEEEAAEFIKANV----DKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAPPG+ MGHAGA+ISGGKG A++K A++ AG+ IA SPA +G +L + Sbjct: 232 AFIAGRTAPPGKRMGHAGAIISGGKGTADEKFAALRAAGVEIAESPADMGTALKRAIEK 290 >gi|319795822|ref|YP_004157462.1| succinyL-CoA synthetase, alpha subunit [Variovorax paradoxus EPS] gi|315598285|gb|ADU39351.1| succinyl-CoA synthetase, alpha subunit [Variovorax paradoxus EPS] Length = 299 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 157/298 (52%), Positives = 214/298 (71%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+T+V+ QG+TGK G FHT Y V G++P K + G +PV Sbjct: 1 MSILINKHTRVITQGITGKTGQFHTAMCRDYGNGQKCFVAGVNPNKAGKSFDG----IPV 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV +AK T A SVIYVPP A AI E+++AE+ L++CITEGIPV DM+R + R+E Sbjct: 57 FGTVKDAKAETGATVSVIYVPPPFAAAAIDEAVDAELDLVICITEGIPVRDMIRTRHRME 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S + L+GPNCPG++TPD KIGIMPG I ++G +G++SRSGTLTYEA Q ++ G+GQS Sbjct: 117 GSRTLLLGPNCPGLITPDEIKIGIMPGHIHQRGRIGVVSRSGTLTYEAASQLARFGIGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV G + IDVL++F D T++++MVGEIGG+ EE A+++KD + KP Sbjct: 177 TVVGIGGDPVGGLKHIDVLKMFNDDPRTDAVIMVGEIGGNEEEICARWIKDHMR----KP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +VGF+AG TAPPG+ MGHAGA++SGG+G A++K+ MKE GI + +PA +G+ L L Sbjct: 233 VVGFIAGATAPPGKRMGHAGAIVSGGRGTAQEKLAVMKECGIHVTSNPAEMGKLLASL 290 >gi|193213404|ref|YP_001999357.1| succinyl-CoA synthetase subunit alpha [Chlorobaculum parvum NCIB 8327] gi|193086881|gb|ACF12157.1| succinyl-CoA synthetase, alpha subunit [Chlorobaculum parvum NCIB 8327] Length = 300 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 166/304 (54%), Positives = 230/304 (75%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T+++VQG+TG GTFHT Q + Y T VV G+ P KG + G + Sbjct: 1 MSVLVNKDTRLVVQGITGGEGTFHTSQILEY-GTNVVAGVTPGKGGILYNGNEKDQFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV EA E+ ANA+VI+VP + A DAI+E+ +A + +I+CITEGIPV DM++ + Sbjct: 60 VPVFDTVREAVEKAEANATVIFVPAAFAADAIMEAADAGLKVIICITEGIPVNDMMKAYS 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + L+GPNCPG++TP K+GIMPG I +KGS+G++SRSGTLTYEAV Q ++ GL Sbjct: 120 FVQEKGAVLVGPNCPGVITPGEAKVGIMPGFIHKKGSIGVVSRSGTLTYEAVHQLTEVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT FID +++F D+ TE ++M+GEIGGSAEEEAA+++K Sbjct: 180 GQSTCIGIGGDPIIGTRFIDAVKMFAKDDDTEGLIMIGEIGGSAEEEAAEYIKKY----F 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG AE+KI AM+ AGI + +PA IG+++++ Sbjct: 236 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAEEKIKAMEAAGIKVVENPADIGQAMLK 295 Query: 296 LLGS 299 LG Sbjct: 296 ALGK 299 >gi|194335584|ref|YP_002017378.1| succinyl-CoA synthetase, alpha subunit [Pelodictyon phaeoclathratiforme BU-1] gi|194308061|gb|ACF42761.1| succinyl-CoA synthetase, alpha subunit [Pelodictyon phaeoclathratiforme BU-1] Length = 299 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 168/304 (55%), Positives = 230/304 (75%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T++LVQG+TG GTFHT Q + Y T VV G+ P KG + G + Sbjct: 1 MSVLVNKDTRLLVQGITGGEGTFHTSQILEY-GTNVVAGVTPGKGGILYHGNEKDKFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV EA ++ ANA+VI+VP + A DA++E+ +A + +I+CITEGIPV DM++ A Sbjct: 60 VPVFDTVREAVQKAEANATVIFVPAAFAADAVMEAADAGLKVIICITEGIPVNDMMKAYA 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + L+GPNCPG++TP K+GIMPG I +KG++G++SRSGTLTYEAV Q ++ GL Sbjct: 120 FVKQKGAVLVGPNCPGVITPGEAKVGIMPGFIHKKGTIGVVSRSGTLTYEAVHQLTEVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT+FID ++LF D+ TE +VM+GEIGGSAEEEAA ++K+ Sbjct: 180 GQSTCIGIGGDPIIGTQFIDAIKLFAMDDETEGLVMIGEIGGSAEEEAAAYIKEY----F 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP++GF+AG+TAPPGR MGHAGA++SGGKG AEDKI AM+ AGI + SPA IG ++++ Sbjct: 236 KKPVIGFIAGRTAPPGRRMGHAGAIVSGGKGTAEDKITAMEAAGIHVVKSPADIGEAMLK 295 Query: 296 LLGS 299 LG Sbjct: 296 ALGR 299 >gi|85860261|ref|YP_462463.1| succinyl-CoA synthetase subunit alpha [Syntrophus aciditrophicus SB] gi|85723352|gb|ABC78295.1| succinyl-CoA synthetase alpha chain [Syntrophus aciditrophicus SB] Length = 291 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 152/297 (51%), Positives = 209/297 (70%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+++NT+V VQG+TG G FH + I Y T+VV G+ P KG G VPVF Sbjct: 1 MSILINENTRVAVQGITGTEGAFHARRMIEY-GTKVVAGVTPGKGGLVHDG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 ++ EA + TA + SVI+VP A DA++E+ EA I L+VC EGIPVLD V + LE+ Sbjct: 56 SMREAAQETAPDVSVIFVPAPYAADAVMEATEAGIKLVVCPAEGIPVLDTVLARRYLEER 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPN PGI++P CK+G+M G I R+GSVG++SRSGTLTYEAV Q S++G+GQST Sbjct: 116 KVMLIGPNTPGIISPGKCKVGLMAGYIHRQGSVGVVSRSGTLTYEAVHQLSRKGIGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+D+L+L+ D T+++V++GEIGGS EE+AA+F + KP++ Sbjct: 176 LGIGGDPVVGLSFVDILQLYEEDPGTKAVVLIGEIGGSMEEKAAEFFR----TTMTKPLI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAPP R MGHAGA+IS +GGA++KI A+++AG+ + +PA IG + L Sbjct: 232 AYIAGVTAPPERRMGHAGAIISRNRGGAQEKIRALEDAGVIVVRNPAEIGDIVESAL 288 >gi|26354008|dbj|BAC40634.1| unnamed protein product [Mus musculus] Length = 333 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 224/298 (75%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I +DKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 37 IYIDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQKHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DMVRVK RL + + Sbjct: 92 KEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGT 151 Query: 123 -RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 RLIGPNCPGI+ P C IGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS + Sbjct: 152 TRLIGPNCPGIINPGECXIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCI 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GI GDP GT+FID LE+FL D ATE I+++GEIGG AEE AA FLK+ + KP+V Sbjct: 212 GIXGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENAAAFLKEHNSGPKAKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 272 FIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEK 329 >gi|71896153|ref|NP_001025589.1| succinate-CoA ligase, GDP-forming alpha subunit [Xenopus (Silurana) tropicalis] gi|60551746|gb|AAH91038.1| succinate-CoA ligase, alpha subunit [Xenopus (Silurana) tropicalis] Length = 325 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 176/298 (59%), Positives = 228/298 (76%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DK+T+V+ QG TGK GTFH++QA+ Y T++VGG+ P KG + G +PVF +V Sbjct: 29 LYIDKDTRVICQGFTGKQGTFHSQQALEY-GTKLVGGVSPGKGGSAHLG----LPVFNSV 83 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 AEAKE T A ASVIYVPP A AI E+I+AEI L+VCITEGIP DMVRVK RL +++ Sbjct: 84 AEAKEATGATASVIYVPPPFAAAAIHEAIDAEISLVVCITEGIPQQDMVRVKHRLLRQTT 143 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 144 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 203 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID L++FL+D TE I+++GEIGGSAEE AA+FL+ KP+V Sbjct: 204 GIGGDPFNGTNFIDCLDVFLSDPKTEGIILIGEIGGSAEENAAEFLRTNNAGPNAKPVVS 263 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A+++AG+ ++ SPA++G ++ + Sbjct: 264 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQKAGVVVSMSPAQLGSTMHKEFEK 321 >gi|288960090|ref|YP_003450430.1| succinyl-CoA synthetase alpha chain [Azospirillum sp. B510] gi|288912398|dbj|BAI73886.1| succinyl-CoA synthetase alpha chain [Azospirillum sp. B510] Length = 291 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 186/298 (62%), Positives = 232/298 (77%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVDKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG ++++P+F Sbjct: 1 MAVLVDKNTKVICQGFTGAQGTFHSEQAIAY-GTKMVGGVTPGKGG----AKHLDLPIFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+T ANASVIYVPP A DAI+E+I+AEIPL+VCITEGIPVLDMVRVK L S Sbjct: 56 TVAEAVEKTGANASVIYVPPPFAADAILEAIDAEIPLVVCITEGIPVLDMVRVKRALNGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPG++TPD CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQ+T Sbjct: 116 ATRLIGPNCPGVITPDECKIGIMPGHIHKRGKIGIVSRSGTLTYEAVAQTTAAGLGQTTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT F+D LELF+ D TE I+M+GEIGG AE + A+F+K G +KP+V Sbjct: 176 IGIGGDPVNGTNFVDSLELFVKDPETEGIIMIGEIGGDAEVKGAEFIKA---SGTRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGAVISGG A+ KI+ MK GI +A SPA +G ++ + Sbjct: 233 GFIAGRTAPPGRRMGHAGAVISGGNDTADFKIDFMKSVGIAVADSPASLGSTMQAIFK 290 >gi|222053359|ref|YP_002535721.1| succinyl-CoA synthetase, alpha subunit [Geobacter sp. FRC-32] gi|221562648|gb|ACM18620.1| succinyl-CoA synthetase, alpha subunit [Geobacter sp. FRC-32] Length = 290 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 165/298 (55%), Positives = 217/298 (72%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QGL G G FH A Y TQ+VGG+ P KG T G PVF Sbjct: 1 MSILIDKNTKVITQGL-GATGLFHANGARDY-GTQMVGGVTPGKGGTTIEG----FPVFD 54 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A ASVIYVPP A DAI+E+++A I L+ CITEGIPVLDMV+VK ++ Sbjct: 55 TVKEAVYKTGATASVIYVPPPFAADAIMEAVDAGIDLVCCITEGIPVLDMVKVKQYMQGK 114 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CKIGIMPG I + G +G++SRSGTLTYEAV+Q + GLGQST Sbjct: 115 RTRLVGPNCPGVITPGQCKIGIMPGYIHKPGKIGVVSRSGTLTYEAVWQLTNVGLGQSTC 174 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV G+ +DVL++F D TE+++M+GEIGG++EEE A F+K+ KP+ Sbjct: 175 VGIGGDPVNGSSHLDVLKMFEEDPGTEAVIMIGEIGGTSEEEGAYFVKEHM----TKPVA 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A +K+ +++ GI +A SPA + ++L+++ Sbjct: 231 AYIAGVTAPPGKRMGHAGAIISGGKGTAAEKVAVLEDCGIAVAASPADMAQALLKVYK 288 >gi|149194473|ref|ZP_01871569.1| Succinyl-CoA ligase, alpha subunit [Caminibacter mediatlanticus TB-2] gi|149135217|gb|EDM23697.1| Succinyl-CoA ligase, alpha subunit [Caminibacter mediatlanticus TB-2] Length = 292 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 156/299 (52%), Positives = 210/299 (70%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+VQG TGK GTFH+EQ + Y T +VGG+ P KG G PVF Sbjct: 1 MSILVNKDTKVIVQGFTGKEGTFHSEQCMAY-GTNIVGGVTPNKGGMTHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A S+I+VPP+ DA++E+ +A + L V ITEG PV DM+ K K Sbjct: 56 TVEEAVKATGATVSMIFVPPAFVADAVMEAADAGVELAVIITEGAPVKDMMYAKHYAVKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + IGPNCPGI+T + CKIGIMPG+IF+KG+VG++S+SGTLTYEA Q +EGLG +TA Sbjct: 116 GMKTIGPNCPGIITAEECKIGIMPGNIFKKGNVGLISKSGTLTYEASNQVVKEGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L +F D+ TE+IVM+GEIGG E +AA+ +K+ KP++ Sbjct: 176 VGIGGDPIIGLSYKELLPMFEEDDETEAIVMIGEIGGDLEIQAAKLIKE----KISKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP G+ MGHAGA+ISG KG A +K+ A++EAG + SPA IG ++ + L Sbjct: 232 AFIAGQTAPKGKRMGHAGAIISGSKGTAAEKMAALEEAGAYVVKSPADIGATVAKALKE 290 >gi|285808255|gb|ADC35788.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [uncultured bacterium 282] Length = 291 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 166/299 (55%), Positives = 225/299 (75%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+K T+++VQG+TG+ GTFH + Y T+VVGG+ P KG T G PVF Sbjct: 1 MAVLVNKETRLIVQGITGREGTFHAKGCAEY-GTKVVGGVTPGKGGTTHEG----WPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T AN SVI+VPP A D I+E+ A +PL++CITEGIPVLDM++ +++S Sbjct: 56 TVEEAVKETGANVSVIFVPPPFAADGILEATAAGVPLVICITEGIPVLDMIKTWEVVKQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG+++P K+GIMPG I ++G+VGI+S+SGTLTYEAV+Q +Q G+GQSTA Sbjct: 116 KTRLIGPNCPGVISPGKAKVGIMPGRIHKEGNVGIVSKSGTLTYEAVYQLTQRGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID L+L D TE+I+M+GEIGG+AEE AA+++K+ KKP+V Sbjct: 176 IGIGGDPIIGTTHIDALKLLNEDPETEAIIMIGEIGGTAEEAAAKYIKENV----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+ISGG+G A +K+ AM AGI + SPA IG ++ ++LG Sbjct: 232 GFIAGQTAPPGRRMGHAGAIISGGEGTAAEKMKAMSAAGITVVKSPAEIGDAMAKVLGK 290 >gi|206602145|gb|EDZ38627.1| Succinyl-CoA synthetase, alpha subunit [Leptospirillum sp. Group II '5-way CG'] Length = 305 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 172/304 (56%), Positives = 225/304 (74%), Gaps = 14/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD++T+V+VQG+TGK G++H Y T+VVGG+ P KG T G PV+ Sbjct: 1 MSILVDRSTRVIVQGITGKEGSYHATACREY-GTKVVGGVTPGKGGTTHEG----FPVWN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 +V +A+E + S+I+VPP+ A DAI+ESI A+IPLIVCITEGIPVLDMVRV+ L Sbjct: 56 SVFDAREAENPDVSLIFVPPAFAADAILESIAADIPLIVCITEGIPVLDMVRVRRVLDSR 115 Query: 118 --EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 + + RLIGPNCPGI+TPD KIGIMPG I ++G VG++SRSGTLTYEAV+Q +Q GL Sbjct: 116 NEQGNPIRLIGPNCPGIITPDGAKIGIMPGYIHKRGRVGVVSRSGTLTYEAVWQLTQLGL 175 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G+ST VGIGGDPV+G FIDVLE+F D TE++VM+GEIGG EE+AA F A+ Sbjct: 176 GESTCVGIGGDPVRGLNFIDVLEMFELDPETEAVVMIGEIGGEDEEKAAVF----AQTKM 231 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VGF+AG TAPPGR MGHAGA++SGGKG A DK+ ++ G+ + +P+ IG+++ + Sbjct: 232 TKPVVGFIAGLTAPPGRRMGHAGAIVSGGKGTARDKMAFLESHGVRVVDNPSLIGKTVAD 291 Query: 296 LLGS 299 +L S Sbjct: 292 VLAS 295 >gi|298484466|ref|ZP_07002620.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Bacteroides sp. D22] gi|298269375|gb|EFI10982.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Bacteroides sp. D22] Length = 286 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 147/295 (49%), Positives = 213/295 (72%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+++VQG+TG+ G FH ++ Y T+VVGG P KG T G +PVF Sbjct: 1 MSILIDKSTRLIVQGITGRDGLFHAKKMKEY-GTKVVGGTSPGKGGTDVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A E+T AN S+I+VP A DAI+E+ +A I +IVCI EGIP LD+++ E+ Sbjct: 56 TMYDAVEQTKANTSIIFVPARFAADAIMEAADAGIRIIVCIAEGIPTLDVIKAHRFAEQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P +GI+PG +F +G+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAMLIGPNCPGLISPGKSMVGILPGQVFLEGNVGVISRSGTLTYEIVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F +LE+F D TE+IV++GEIGG+AEE+AA+++++ KP+V Sbjct: 176 IGIGGDPVVGLHFRQLLEMFQNDPETEAIVLIGEIGGNAEEQAAEYIRNNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG++APPG+ MGHAGA+ISG G A++KI +++ AGI +A P+ I + L + Sbjct: 232 AFIAGQSAPPGKQMGHAGAIISGSSGSAKEKIESLEAAGIRVAQEPSDIPKLLKK 286 >gi|4104377|gb|AAD02018.1| ATP-specific succinyl-CoA synthetase alpha subunit [Columba livia] gi|4104379|gb|AAD02019.1| GTP-specific succinyl-CoA synthetase alpha subunit [Columba livia] Length = 306 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 225/299 (75%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + KNTKV+ QG TGK GTFH++QA+ Y T +VGGI P KG G +PVF + Sbjct: 9 NLYISKNTKVICQGFTGKQGTFHSQQALDY-GTNLVGGISPGKGGKTHLG----LPVFNS 63 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A+A+VIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL + Sbjct: 64 VKEAKEQTGASATVIYVPPPFAAAAINEAIDAEMPLVVCITEGIPQQDMVRVKHRLVRQD 123 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QTSQ GLGQS Sbjct: 124 KTRLVGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTSQVGLGQSLC 183 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++FL D TE I+++GEIGG+AEE+AA FLK+ KP+V Sbjct: 184 IGIGGDPFNGTNFIDCLDVFLKDPHTEGIILIGEIGGNAEEDAAAFLKENNSGPNAKPVV 243 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 244 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQNAGVVVSMSPAQLGSTIYKEFEK 302 >gi|160884541|ref|ZP_02065544.1| hypothetical protein BACOVA_02526 [Bacteroides ovatus ATCC 8483] gi|260174864|ref|ZP_05761276.1| succinyl-CoA synthetase alpha chain [Bacteroides sp. D2] gi|315923109|ref|ZP_07919349.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. D2] gi|156110280|gb|EDO12025.1| hypothetical protein BACOVA_02526 [Bacteroides ovatus ATCC 8483] gi|313696984|gb|EFS33819.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. D2] Length = 286 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 148/295 (50%), Positives = 212/295 (71%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+++VQG+TG+ G FH ++ Y T VVGG P KG T G +PVF Sbjct: 1 MSILIDKSTRLIVQGITGRDGLFHAKKMKEY-GTHVVGGTSPGKGGTDVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A E+T AN S+I+VP A DAI+E+ +A I LIVCI EGIP LD+++ +E+ Sbjct: 56 TMYDAVEQTKANTSIIFVPARFAADAIMEAADAGIRLIVCIAEGIPTLDVIKAHQFVEQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P +GI+PG +F +G+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAMLIGPNCPGLISPGKSMVGILPGQVFLEGNVGVISRSGTLTYEIVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F +LE+F D TE+IV++GEIGG+AEE+AA+++++ KP+V Sbjct: 176 IGIGGDPVVGLHFRQLLEMFQNDPETEAIVLIGEIGGNAEEQAAEYIRNNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG++APPG+ MGHAGA+ISG G A++KI +++ AGI +A P+ I + L Sbjct: 232 AFIAGQSAPPGKQMGHAGAIISGSSGSAKEKIESLEAAGIRVAQKPSDIPKLLKR 286 >gi|32491165|ref|NP_871419.1| hypothetical protein WGLp416 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166372|dbj|BAC24562.1| sucD [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 296 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 162/297 (54%), Positives = 217/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QGLTGK GTFH + + L T++V G+ P KG T G +PVF Sbjct: 6 MSILIDKNTKVICQGLTGKQGTFHCKLS-LEGGTKIVAGVTPGKGGTNHIG----IPVFN 60 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T ANASVIYVP D+I+ESI++ I LIVCITEGIP+ DM+ VK +L++S Sbjct: 61 TMEEAVNNTGANASVIYVPAQFCKDSILESIDSNINLIVCITEGIPISDMIFVKNKLKRS 120 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++ +IGPNCPG++TP CKIGIMP +I G++GI+SRSGTLTYEAV Q + GLGQST Sbjct: 121 NTIMIGPNCPGVITPKQCKIGIMPENIHTPGNIGIISRSGTLTYEAVKQITDVGLGQSTC 180 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G++F D+++LF DE T +I+++GEIGG +EE AA+F+K+ KKPI Sbjct: 181 VGIGGDPIIGSDFKDIIKLFNFDENTHAILIIGEIGGDSEESAAKFIKNNV----KKPIF 236 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +++G TAP G+ MGHAGA+IS G+G A KI ++K AG+ I + ++IG + E L Sbjct: 237 AYISGITAPIGKRMGHAGAIISNGQGTAISKITSLKNAGVKIIDNLSKIGLCIKENL 293 >gi|224370323|ref|YP_002604487.1| SucD2 [Desulfobacterium autotrophicum HRM2] gi|223693040|gb|ACN16323.1| SucD2 [Desulfobacterium autotrophicum HRM2] Length = 289 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 169/298 (56%), Positives = 207/298 (69%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI VDK T+++VQG+TGK G FHT Q I Y T+VV G+ P KG VPVF Sbjct: 1 MSIFVDKETRLVVQGITGKEGQFHTRQCIEY-GTKVVAGVTPGKGGQQMD----KVPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+T ANAS+I+VPP DAI+E+ ++ + LIV ITEGIPV+DMVRVK L Sbjct: 56 TVAEAVEQTGANASMIFVPPPFCADAIMEAADSGVDLIVAITEGIPVMDMVRVKNFLVTK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS-VGILSRSGTLTYEAVFQTSQEGLGQST 179 + RLIGPNCPGI+TP CKIGIMPG I G G++SRSGTLTYE V Q ++ G+GQ+T Sbjct: 116 TCRLIGPNCPGIITPGECKIGIMPGKIHMPGGPAGVISRSGTLTYEVVDQLTKLGIGQTT 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT FIDVL+ F D T IVMVGEIGG+AEEEAA F+K KP+ Sbjct: 176 CIGIGGDPINGTNFIDVLQAFENDPDTRGIVMVGEIGGNAEEEAAAFIKAHV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG TAPPGR MGHAGA+ISGG G + KI AM++ GI + + +G + Sbjct: 232 VGFIAGLTAPPGRRMGHAGAIISGGSGTGQAKIEAMEKNGIHVCKNLGILGEVCKSVF 289 >gi|9483736|gb|AAD33927.2|AF144101_1 succinyl-CoA synthetase [Mus musculus] Length = 333 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 178/298 (59%), Positives = 225/298 (75%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I +DKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 37 IYIDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQKHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DMVRVK RL + + Sbjct: 92 KEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGT 151 Query: 123 -RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 RLIGPNCPG++ P CKIGIMPG I +KG +GI+S+SGTLTYEAV QT+Q GLG S + Sbjct: 152 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSKSGTLTYEAVHQTTQVGLGHSLCI 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG AEE AA FLK+ + KP+V Sbjct: 212 GIGGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENAAAFLKEHNSGPKAKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 272 FIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEK 329 >gi|34557449|ref|NP_907264.1| succinyl-COA synthetase alpha chain [Wolinella succinogenes DSM 1740] gi|34483165|emb|CAE10164.1| SUCCINYL-COA SYNTHETASE ALPHA CHAIN [Wolinella succinogenes] Length = 294 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 159/297 (53%), Positives = 216/297 (72%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K T+V+VQG TGK GTFH+EQ + Y TQ++GG+ P KG + G +PVF Sbjct: 1 MSILINKETRVIVQGFTGKEGTFHSEQCLAY-GTQILGGVTPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A AS+++VPP+ DA++E+ + I L V ITEG P+ DMV K +K Sbjct: 56 TVEEAVRETGAWASMVFVPPAFVADAVMEAASSGIKLAVVITEGAPIKDMVVAKRYAQKC 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPGI+T + CKIGIMPGSIF+ GS+G++S+SGTLTYEA Q Q G G STA Sbjct: 116 GMEIIGPNCPGIITSEECKIGIMPGSIFKSGSIGLISKSGTLTYEASHQIVQAGFGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G + ++L+ F DE TE+IV++GEIGG+ E EAA F+K+ KKP+V Sbjct: 176 IGIGGDPVIGLGYKELLDRFEKDEKTEAIVLIGEIGGTLEIEAASFIKERV----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAP G+ MGHAGA++SGG G A++K++A++EAG+ + SPA IG+++V LL Sbjct: 232 AFIAGQTAPKGKRMGHAGAIVSGGSGSAKEKMDALREAGVRVIESPADIGKAIVSLL 288 >gi|225677210|ref|ZP_03788203.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590734|gb|EEH11968.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 291 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 180/297 (60%), Positives = 229/297 (77%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+T+++ QG TG GTFH+EQAI Y T++VGG+ P KG + +N+PVF Sbjct: 1 MSVLVNKDTRLICQGFTGAQGTFHSEQAIDY-GTKMVGGVTPGKGGSTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAKE+T ANA+VIYVP A AI+E+I+A+I LI+CITEGIP+LDMV+VK L S Sbjct: 56 TVAEAKEKTGANATVIYVPAKFAAAAILEAIDAKIELIICITEGIPILDMVKVKRALIGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRLIGPNCPGIITPEECKIGIMPGHIHKRGHIGIMSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+D +ELFL D+ T IV++GEIGG+ EE+ + F+K E KKPIV Sbjct: 176 IGIGGDPVHGMTFVDCMELFLKDDDTHGIVVIGEIGGNEEEDVSHFVKTEK---TKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GFVAG+TAPPGR MGHAGA+IS G A K+ M+ AGI IA +PA IG+ ++E++ Sbjct: 233 GFVAGQTAPPGRRMGHAGAIISSSGGSAGAKLEVMRSAGIAIAETPAVIGKKVLEVM 289 >gi|237713288|ref|ZP_04543769.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. D1] gi|262406573|ref|ZP_06083122.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 2_1_22] gi|294647280|ref|ZP_06724875.1| succinyl-CoA synthetase subunit alpha [Bacteroides ovatus SD CC 2a] gi|294808525|ref|ZP_06767273.1| succinyl-CoA synthetase subunit alpha [Bacteroides xylanisolvens SD CC 1b] gi|229446755|gb|EEO52546.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. D1] gi|262355276|gb|EEZ04367.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 2_1_22] gi|292637356|gb|EFF55779.1| succinyl-CoA synthetase subunit alpha [Bacteroides ovatus SD CC 2a] gi|294444258|gb|EFG12977.1| succinyl-CoA synthetase subunit alpha [Bacteroides xylanisolvens SD CC 1b] Length = 286 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 147/295 (49%), Positives = 213/295 (72%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+++VQG+TG+ G FH ++ Y T+VVGG P KG T G +PVF Sbjct: 1 MSILIDKSTRLIVQGITGRDGLFHAKKMKEY-GTKVVGGTSPGKGGTDVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A E+T AN S+I+VP A DAI+E+ +A I +IVCI EGIP LD+++ E+ Sbjct: 56 TMYDAVEQTKANTSIIFVPARFAADAIMEAADAGIRVIVCIAEGIPTLDVIKAHQFAEQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P +GI+PG +F +G+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAMLIGPNCPGLISPGKSMVGILPGQVFLEGNVGVISRSGTLTYEIVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F +LE+F D TE+IV++GEIGG+AEE+AA+++++ KP+V Sbjct: 176 IGIGGDPVVGLHFRQLLEMFQNDPETEAIVLIGEIGGNAEEQAAEYIRNNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG++APPG+ MGHAGA+ISG G A++KI +++ AGI +A P+ I + L + Sbjct: 232 AFIAGQSAPPGKQMGHAGAIISGSSGSAKEKIESLEAAGIRVAQEPSDIPKLLKK 286 >gi|225718040|gb|ACO14866.1| Succinyl-CoA ligase subunit alpha, mitochondrial precursor [Caligus clemensi] Length = 327 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 171/299 (57%), Positives = 227/299 (75%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++++ K++KV+ QG TGK GTFH++QAI Y T +VGG+ PKK T G +PVF + Sbjct: 30 NMMLTKDSKVICQGFTGKQGTFHSQQAIEY-GTNMVGGVSPKKAGTTHLG----LPVFGS 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS- 120 V EA A+A+VIYVPP GA AI+E+I+AE+PLIVCITEG+P DMV+V +L+ Sbjct: 85 VKEAMTEVKADATVIYVPPPGAAAAILEAIDAEVPLIVCITEGVPQHDMVKVIRKLKNQD 144 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S+LIGPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT+Q GLGQ+ Sbjct: 145 KSKLIGPNCPGIIAPNKCKIGIMPGHIHQEGCIGVVSRSGTLTYEAVHQTTQVGLGQTLC 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D AT+ I+M+GEIGG+AEE AA++L + +KP+V Sbjct: 205 VGIGGDPFNGTNFIDCLDIFLKDPATKGIIMIGEIGGAAEEHAAEYLMEHNSGPNQKPVV 264 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+ISGGKG A+ KI A++ AG+ + PSPA++G +LV+L+ Sbjct: 265 SFIAGVTAPPGRRMGHAGAIISGGKGTAQTKIAALEAAGVGVTPSPAQMGTTLVKLMKD 323 >gi|139948224|ref|NP_446204.2| succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor [Rattus norvegicus] gi|223634703|sp|P13086|SUCA_RAT RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor gi|113819468|gb|AAH61537.2| Suclg1 protein [Rattus norvegicus] Length = 346 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 220/299 (73%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I +DKNTKV+ QG TGK GTFH++QA+ Y V G ++ +PVF T Sbjct: 49 NIYIDKNTKVICQGFTGKQGTFHSQQALEYGTKLVGGT-----TPGKGGKKHLGLPVFNT 103 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DMVRVK +L + Sbjct: 104 VKEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHKLTRQG 163 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 164 KTRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 223 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++FL D ATE IV++GEIGG AEE AA+FLK+ + KP+V Sbjct: 224 IGIGGDPFNGTNFIDCLDVFLKDPATEGIVLIGEIGGHAEENAAEFLKEHNSGPKAKPVV 283 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G + + Sbjct: 284 SFIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVIVSMSPAQLGTCMYKEFEK 342 >gi|260910326|ref|ZP_05917000.1| succinyl-CoA synthetase subunit alpha [Prevotella sp. oral taxon 472 str. F0295] gi|260635578|gb|EEX53594.1| succinyl-CoA synthetase subunit alpha [Prevotella sp. oral taxon 472 str. F0295] Length = 292 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 146/299 (48%), Positives = 207/299 (69%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNT+++VQG+TG+ G FH + Y T VVGG P K +G +PVF Sbjct: 1 MSILINKNTRLIVQGITGRDGGFHATKMKAY-GTNVVGGTSPGKAGQEVSG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T AN SVI+VP + A DA++E+ +A I LI+CITEG+P LD+V+ + + Sbjct: 56 TVRDAVEATQANTSVIFVPAAFAKDAMMEAADAGIQLIICITEGVPTLDVVQAYNYIRQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++LIGPNCPG+++P+ +GIMP +IF+KG G++SRSGTLTYE V+ +Q G+GQSTA Sbjct: 116 GAKLIGPNCPGLISPEESMVGIMPTNIFKKGGTGVISRSGTLTYEVVYNLTQNGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ G F D+LE+F D AT+SI ++GEIGG AEE AA+++K KP+ Sbjct: 176 VGVGGDPIVGLYFQDLLEMFENDPATDSIAIIGEIGGDAEERAAEYIKAHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F++G+ AP G+ MGHAGA+IS G G A++K+ A + AGI +A + I L + L + Sbjct: 232 AFISGREAPKGKQMGHAGAIISSGSGTAKEKVAAFEAAGIPVARETSEIPMLLKKQLDA 290 >gi|255069881|ref|XP_002507022.1| succinate-coa ligase [Micromonas sp. RCC299] gi|226522297|gb|ACO68280.1| succinate-coa ligase [Micromonas sp. RCC299] Length = 326 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 184/299 (61%), Positives = 229/299 (76%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V+K+TKV+ QG TGK GTFH+EQAI Y T +VGG+ PKKG T G +PVF T Sbjct: 32 AVFVNKHTKVICQGFTGKNGTFHSEQAIAY-GTNMVGGVTPKKGGTTHLG----LPVFNT 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK T ANAS IYVPP A AI+E++EAEI L+VCITEGIP DMVRVK L +S Sbjct: 87 VAEAKAETGANASAIYVPPPFAAKAIMEAMEAEIDLVVCITEGIPQHDMVRVKQALMRQS 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +G++SRSGTLTYEAVFQT+Q GLGQST Sbjct: 147 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGVVSRSGTLTYEAVFQTTQVGLGQSTC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+F+D LE F+ D+ TE I+M+GEIGG+AEE+AA+F+K G KP+V Sbjct: 207 VGIGGDPFNGTDFVDCLERFVKDDETEGIIMIGEIGGNAEEQAAEFIKA---SGTTKPVV 263 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA+DKINA++ AG+ + SPA++G + ++ Sbjct: 264 SFIAGLTAPPGRRMGHAGAIIAGGKGGAQDKINALESAGVTVVKSPAQMGNVMYDIFKE 322 >gi|88606882|ref|YP_505610.1| succinyl-CoA synthetase, alpha subunit [Anaplasma phagocytophilum HZ] gi|88597945|gb|ABD43415.1| succinyl-CoA synthetase, alpha subunit [Anaplasma phagocytophilum HZ] Length = 295 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 188/299 (62%), Positives = 230/299 (76%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKV+ QG TG GTFH+EQAI Y T +VGG+ P KG T G +PVF Sbjct: 1 MSVLVDKNTKVICQGFTGSQGTFHSEQAIAY-GTNMVGGVTPGKGGTEHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+AKE T ANASVIYVP + A DAI+E++EAEI LIVCITEGIPVLDMVRVK L S Sbjct: 56 TVAQAKEATGANASVIYVPAAFAADAILEALEAEIELIVCITEGIPVLDMVRVKRALRGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP+ CKIGIMPG I KG+VG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 RSRLIGPNCPGIITPEECKIGIMPGYIHGKGNVGVVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F + +ELF+ D+ T IVM+GEIGGS EEEA ++++ K KKP++ Sbjct: 176 IGIGGDPVHGLTFAECVELFMNDDDTHCIVMIGEIGGSEEEEAVEYMQSLEK---KKPMI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GFVAG+TAP GR MGHAGA+ SG G A+ KI M+ AG+ +A +PA IG++++E++ S Sbjct: 233 GFVAGQTAPAGRRMGHAGAITSGNSGTAKGKIEFMERAGVVVAATPAVIGKTVLEVMQS 291 >gi|204356|gb|AAA41233.1| succinyl-CoA synthetase alpha subunit (EC 6.2.1.4) [Rattus norvegicus] Length = 333 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 174/299 (58%), Positives = 220/299 (73%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I +DKNTKV+ QG TGK GTFH++QA+ Y V G ++ +PVF T Sbjct: 36 NIYIDKNTKVICQGFTGKQGTFHSQQALEYGTKLVGGT-----TPGKGGKKHLGLPVFNT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DM+RVK +L + Sbjct: 91 VKEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMLRVKHKLTRQG 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++FL D ATE IV++GEIGG AEE AA+FLK+ + KP+V Sbjct: 211 IGIGGDPFNGTNFIDCLDVFLKDPATEGIVLIGEIGGHAEENAAEFLKEHNSGPKAKPVV 270 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G + + Sbjct: 271 SFIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVIVSMSPAQLGTCMYKEFEK 329 >gi|17553126|ref|NP_497288.1| hypothetical protein F23H11.3 [Caenorhabditis elegans] gi|2088859|gb|AAC71132.1| Hypothetical protein F23H11.3 [Caenorhabditis elegans] Length = 321 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 170/297 (57%), Positives = 223/297 (75%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +++++K+TKV+VQG TG+ GTFH++Q + Y T +VGG+ P K G +PVF + Sbjct: 28 NLMINKSTKVIVQGFTGRQGTFHSKQMLEY-NTNLVGGVSPNKAGQTHLG----LPVFGS 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+RT A+A+VIYVP +GA AI E+++AEI LIV ITEGIP DMVRVK RL +++ Sbjct: 83 VAEAKDRTGADATVIYVPAAGAARAIHEAMDAEIGLIVAITEGIPQQDMVRVKNRLLKQN 142 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 143 KSRLLGPNCPGIIASGDCKIGIMPGHIHKKGCIGIVSRSGTLTYEAVHQTTTVGLGQTRC 202 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL DE T+ I+++GEIGG AEE+AA+FLK KP+V Sbjct: 203 IGIGGDPFNGTNFIDCLEVFLEDEQTKGIILIGEIGGQAEEQAAEFLKSRNSGSNAKPVV 262 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+I+GGKG A DKI A++ A + + SPA++G ++ + L Sbjct: 263 SFIAGVTAPPGRRMGHAGAIIAGGKGTAGDKIEALRNANVVVTDSPAKLGVAMQKAL 319 >gi|89898037|ref|YP_515147.1| succinyl-CoA synthetase subunit alpha [Chlamydophila felis Fe/C-56] gi|89331409|dbj|BAE81002.1| succinyl-CoA synthetase alpha chain [Chlamydophila felis Fe/C-56] Length = 291 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 157/300 (52%), Positives = 213/300 (71%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M + K ++ QG+TGKAG+FHTE+ + Y + V G+ P KG T ++N+PV+ Sbjct: 1 MFCSLSKKIPIITQGITGKAGSFHTEKCLEY-GSNFVAGVTPGKGGT----KHLNLPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK+ T ++I+VPP+ A +AI+E+ +A I LIVCITEGIP+ DM+ V ++ S Sbjct: 56 SVLEAKQATNCQITMIFVPPAYAAEAILEAEDAGIELIVCITEGIPIKDMLEVSHVMQHS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPGI+ P +CKIGIMPG I G+VG++SRSGTLTYEAV+Q +Q +GQS Sbjct: 116 ASRLIGPNCPGIIKPGACKIGIMPGYIHLPGNVGVVSRSGTLTYEAVWQLTQRSIGQSVC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FIDVLE F D TE I+M+GEIGGSAEEEAA++++ KP+V Sbjct: 176 LGIGGDPLNGTSFIDVLEEFQNDPQTELILMIGEIGGSAEEEAAEWIQSYC----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG+TAP G+ MGHAGA+ISG G A+ K A+K AG+ + SPA IG ++ + SL Sbjct: 232 AFIAGETAPKGKRMGHAGAIISGNSGDAKSKKKALKRAGVSVVESPALIGEAVETVFRSL 291 >gi|225457502|ref|XP_002268479.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 340 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 183/297 (61%), Positives = 227/297 (76%), Gaps = 9/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF TV Sbjct: 45 VFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNTV 99 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 AEAK T AN SVIYVPP A AI+E++EAE+ L+VCITEGIP DMV+VKA L ++ Sbjct: 100 AEAKAETKANTSVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVKVKAALNRQTK 159 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G VGI+SRSGTLTYEAVFQT+ GLGQST+V Sbjct: 160 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTSV 219 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D ++ FL D TE IV++GEIGG+AEE+AAQ +K+ KPIV Sbjct: 220 GIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEIGGTAEEDAAQLIKESKTE---KPIVA 276 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA++SGGKG A+DKI ++EAG+ + SPA++G +++E Sbjct: 277 FIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKMGVAMLEAFK 333 >gi|319956116|ref|YP_004167379.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nitratifractor salsuginis DSM 16511] gi|319418520|gb|ADV45630.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nitratifractor salsuginis DSM 16511] Length = 290 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 160/299 (53%), Positives = 209/299 (69%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+VQG TGK GTFH Q I Y T++VGG+ P KG G PVF Sbjct: 1 MSILVNKDTKVIVQGFTGKEGTFHASQCIDY-GTKIVGGVTPGKGGQEHLGR----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A S+I+VPP+ DA++E+ EA I L V ITEG PV DM+ K K Sbjct: 56 TVKEAVDSTGATVSMIFVPPAFVADAVMEAAEAGIDLAVIITEGAPVKDMMYAKMYATKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + IGPNCPGI+T + CKIGIMPG+IF+KG+VG++S+SGTLTYEA Q QEG G +TA Sbjct: 116 GMKTIGPNCPGIITAEECKIGIMPGNIFKKGNVGLISKSGTLTYEASHQVVQEGYGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + +L +F AD TE+IVM+GEIGG E +AA ++K+ KP+V Sbjct: 176 VGIGGDPIIGLSYKQLLPMFEADPETEAIVMIGEIGGDLEIQAAAYIKENIS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP G+ MGHAGA+ISGG G A +K+ A++ AG+ + SPA IG+++ E+L Sbjct: 232 AFIAGQTAPKGKRMGHAGAIISGGSGTAAEKMAALEAAGVKVVVSPADIGKAVKEVLSK 290 >gi|156098362|ref|XP_001615213.1| succinyl-CoA synthetase alpha subunit [Plasmodium vivax SaI-1] gi|148804087|gb|EDL45486.1| succinyl-CoA synthetase alpha subunit, putative [Plasmodium vivax] Length = 328 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 173/305 (56%), Positives = 219/305 (71%), Gaps = 8/305 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--GNVNVPVFT 60 + VDKNT V+ QG+TGK GTFHT +A+ Y T++VGG++P+K T W +PVF Sbjct: 24 VFVDKNTTVICQGITGKQGTFHTTEAMKY-GTKMVGGVNPRKKGTMWESLDKKYTLPVFG 82 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 + EAKE+T ASVIYVPP A +AIIESIEAEIPL+VCITEGI DMV+VK L Sbjct: 83 STIEAKEKTNCYASVIYVPPEHAKNAIIESIEAEIPLVVCITEGICQHDMVQVKHCLNMS 142 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++LIGPNCPG++ P CKIGIMP I KG VGI+SRSGTLTYE V QT++ GLGQST Sbjct: 143 KKTKLIGPNCPGVIKPGECKIGIMPSHIHTKGCVGIVSRSGTLTYEGVNQTTKVGLGQST 202 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA----KRGR 235 +GIGGDP GT FID L+LFL DE T+ I+++GEIGG AEE+ A++L K+ + Sbjct: 203 CIGIGGDPFHGTSFIDCLKLFLEDEETKCILLIGEIGGDAEEQVAEWLIQNNVDDGKKKK 262 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+ FVAGK APPG+ MGHAGA+ISGGKG A+DKI A+K AG+ +P +G+ + Sbjct: 263 KKPVFAFVAGKCAPPGKRMGHAGALISGGKGTADDKIEALKSAGVHTIMNPTLMGQEIYS 322 Query: 296 LLGSL 300 ++ L Sbjct: 323 VMNGL 327 >gi|296087991|emb|CBI35274.3| unnamed protein product [Vitis vinifera] Length = 336 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 183/297 (61%), Positives = 227/297 (76%), Gaps = 9/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF TV Sbjct: 41 VFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNTV 95 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 AEAK T AN SVIYVPP A AI+E++EAE+ L+VCITEGIP DMV+VKA L ++ Sbjct: 96 AEAKAETKANTSVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVKVKAALNRQTK 155 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G VGI+SRSGTLTYEAVFQT+ GLGQST+V Sbjct: 156 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTSV 215 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D ++ FL D TE IV++GEIGG+AEE+AAQ +K+ KPIV Sbjct: 216 GIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEIGGTAEEDAAQLIKESKTE---KPIVA 272 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA++SGGKG A+DKI ++EAG+ + SPA++G +++E Sbjct: 273 FIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKMGVAMLEAFK 329 >gi|254455553|ref|ZP_05068982.1| succinyl-CoA synthetase alpha chain [Candidatus Pelagibacter sp. HTCC7211] gi|207082555|gb|EDZ59981.1| succinyl-CoA synthetase alpha chain [Candidatus Pelagibacter sp. HTCC7211] Length = 291 Score = 305 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 194/299 (64%), Positives = 237/299 (79%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+ QG TG GTFH+EQAI Y T +VGG+ PKKG ++ PVF Sbjct: 1 MSILVNKNTKVICQGFTGAHGTFHSEQAIKY-GTNLVGGVTPKKGGQ----KHLYRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK+ A+A++IYVP A AIIE+I+A I LIVCITEGIPV DM++V+ +L S Sbjct: 56 SVIEAKDSVGADATMIYVPAKFAAAAIIEAIDASIELIVCITEGIPVQDMLKVRQKLNGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TPD CKIGIMPG+I ++GSVGI+SRSGTLTYEAV QT++ GLGQST Sbjct: 116 KSRLIGPNCPGIITPDECKIGIMPGNIHKRGSVGIVSRSGTLTYEAVAQTTENGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT FID L+LFL DE T+SI+M+GEIGG+AEEEAA+F+K+ KKPIV Sbjct: 176 IGIGGDPVNGTNFIDCLDLFLNDEETKSILMIGEIGGTAEEEAAEFVKNHKI---KKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG TAPPGR MGHAGA+ISGGKGGAEDKI M+E+GI +A SP+ IG++L L + Sbjct: 233 GFIAGITAPPGRRMGHAGAIISGGKGGAEDKIKKMEESGITVAKSPSIIGKTLFNKLSN 291 >gi|149200488|ref|ZP_01877501.1| succinyl-CoA synthetase subunit alpha [Lentisphaera araneosa HTCC2155] gi|149136411|gb|EDM24851.1| succinyl-CoA synthetase subunit alpha [Lentisphaera araneosa HTCC2155] Length = 290 Score = 305 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 154/298 (51%), Positives = 206/298 (69%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV + T+V+VQG+TG G FHT Y VV G+ P KG G PV+ Sbjct: 1 MAILVTEKTRVVVQGITGSQGAFHTGLMKEYMDNFVVAGVTPGKGGQDLEGT----PVYN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA + N SVI+VPP A DAI+E+++AE+ L++CITEGIPVLDM++VK ++ S Sbjct: 57 SVAEAVKEQQVNTSVIFVPPPFAADAILEAVDAELDLVICITEGIPVLDMMKVKHAMKDS 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP KIGIMP I G +GI+SRSGTLTYEAV Q ++ GLG+ST Sbjct: 117 KTRLIGPNCPGVITPGIGKIGIMPADIHMPGKIGIISRSGTLTYEAVDQITKAGLGESTC 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT+ IDV++LF D TE IV++GEIGG AEE+AA ++K+ KP+V Sbjct: 177 VGIGGDPINGTQHIDVVKLFAEDPQTEGIVLIGEIGGDAEEQAALWIKEN----YDKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAPPG+ MGHAGA++ GG +K+ +K+ GI + SP+ IG ++ Sbjct: 233 GFIAGLTAPPGKRMGHAGAIVGGGDRTGAEKVQYLKDCGIKMVQSPSDIGEAMKSFFS 290 >gi|330844712|ref|XP_003294260.1| succinyl coenzyme A synthetase alpha subunit [Dictyostelium purpureum] gi|325075310|gb|EGC29214.1| succinyl coenzyme A synthetase alpha subunit [Dictyostelium purpureum] Length = 312 Score = 305 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 181/299 (60%), Positives = 228/299 (76%), Gaps = 9/299 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 +L+DKNTKV+ QG TG GTFH++QAI Y TQ+VGG+ P KG ++ +PVF TV Sbjct: 19 VLIDKNTKVICQGFTGNQGTFHSKQAIEY-GTQMVGGVSPGKGGQ----KHLELPVFNTV 73 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAK++T ANA+VIYVPP A AI E+I+A++ LIVCITEGIP DMV+VK L EK + Sbjct: 74 QEAKQQTGANATVIYVPPPFAAAAIKEAIDADMELIVCITEGIPQQDMVKVKKYLNEKPT 133 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQST + Sbjct: 134 TRLIGPNCPGIIKPGECKIGIMPGHIHKKGKIGIVSRSGTLTYEAVAQTTAVGLGQSTCI 193 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D L++F D TE I+++GEIGG AEEEAAQ+L D KP+V Sbjct: 194 GIGGDPFNGTNFVDCLKMFTKDPQTEGIILIGEIGGEAEEEAAQWLIDN---PTDKPVVS 250 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKG A KINA+K AG+ I+PSPA++G +++E + +L Sbjct: 251 FIAGTSAPPGRRMGHAGAIISGGKGDANSKINALKAAGVTISPSPAKLGEAMLERMKAL 309 >gi|158431280|pdb|2YV2|A Chain A, Crystal Structure Of Succinyl-Coa Synthetase Alpha Chain From Aeropyrum Pernix K1 Length = 297 Score = 305 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 138/298 (46%), Positives = 200/298 (67%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD T+VLVQG+TG+ G+FH + A+L T+VV G+ P KG + G VPV+ Sbjct: 6 MAVLVDSETRVLVQGITGREGSFHAK-AMLEYGTKVVAGVTPGKGGSEVHG----VPVYD 60 Query: 61 TVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA E N S+++VP A DA+ E+++A I L+V ITEGIPV D +R + Sbjct: 61 SVKEALAEHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQ 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +IGPNCPG +TP K+GIMPG IF++G V ++SRSGTLTYE + +++G+GQST Sbjct: 121 KGATIIGPNCPGAITPGQAKVGIMPGHIFKEGGVAVVSRSGTLTYEISYMLTRQGIGQST 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G F + L+LF D TE++V++GEIGG EE AA+ +K K KP+ Sbjct: 181 VIGIGGDPIVGLSFTEALKLFQEDPQTEALVLIGEIGGDMEERAAEMIK---KGEFTKPV 237 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + ++AG+TAPP + MGHAGA+I G G E K+ A++EAG+ +A +P + + + L Sbjct: 238 IAYIAGRTAPPEKRMGHAGAIIMMGTGTYEGKVKALREAGVEVAETPFEVPELVRKAL 295 >gi|237718599|ref|ZP_04549080.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 2_2_4] gi|229452059|gb|EEO57850.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 2_2_4] Length = 286 Score = 305 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 148/295 (50%), Positives = 213/295 (72%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+++VQG+TG+ G FH ++ Y T+VVGG P KG T G +PVF Sbjct: 1 MSILIDKSTRLIVQGITGRDGLFHAKKMKEY-GTKVVGGTSPGKGGTDVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A E+T AN S+I+VP A DAI+E+ +A I LIVCI EGIP LD+++ +E+ Sbjct: 56 TMYDAVEQTKANTSIIFVPARFAADAIMEAADAGIRLIVCIAEGIPTLDVIKAHQFVEQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P +GI+PG +F +G+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAMLIGPNCPGLISPGKSMVGILPGQVFLEGNVGVISRSGTLTYEIVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F +LE+F D TE+IV++GEIGG+AEE+AA+++++ KP+V Sbjct: 176 IGIGGDPVVGLHFRQLLEMFQNDPETEAIVLIGEIGGNAEEQAAEYIRNNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG++APPG+ MGHAGA+ISG G A++KI +++ AGI +A P+ I + L Sbjct: 232 AFIAGQSAPPGKQMGHAGAIISGSSGSAKEKIKSLEAAGIRVAQEPSDIPKLLKR 286 >gi|149036441|gb|EDL91059.1| succinate-CoA ligase, GDP-forming, alpha subunit, isoform CRA_b [Rattus norvegicus] Length = 360 Score = 305 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 220/299 (73%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I +DKNTKV+ QG TGK GTFH++QA+ Y V G ++ +PVF T Sbjct: 63 NIYIDKNTKVICQGFTGKQGTFHSQQALEYGTKLVGGT-----TPGKGGKKHLGLPVFNT 117 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DMVRVK +L + Sbjct: 118 VKEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHKLTRQG 177 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 178 KTRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 237 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++FL D ATE IV++GEIGG AEE AA+FLK+ + KP+V Sbjct: 238 IGIGGDPFNGTNFIDCLDVFLKDPATEGIVLIGEIGGHAEENAAEFLKEHNSGPKAKPVV 297 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G + + Sbjct: 298 SFIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVIVSMSPAQLGTCMYKEFEK 356 >gi|118595148|ref|ZP_01552495.1| Succinyl-CoA ligase, alpha subunit [Methylophilales bacterium HTCC2181] gi|118440926|gb|EAV47553.1| Succinyl-CoA ligase, alpha subunit [Methylophilales bacterium HTCC2181] Length = 291 Score = 305 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 169/300 (56%), Positives = 220/300 (73%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVDKNT+VL QG TGK GTFH+EQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MAILVDKNTRVLCQGFTGKQGTFHSEQAITY-GTKLVGGVTPSKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 + EA T ANA++IYVPP A ++IIE+ EA I LIVCITEGIP+L+M+RVK + + Sbjct: 56 NMVEAVNETKANATMIYVPPPFAANSIIEASEAGIDLIVCITEGIPILEMLRVKEVINAN 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S+LIGPNCPGI+TPD CK+GIMP SI + G++GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 GSKLIGPNCPGIITPDQCKMGIMPASIHQAGAIGIISRSGTLTYEAVHQTTAFGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+KG FI+ L +F D +T+ I+MVGEIGG+ EE AA++++ KP+V Sbjct: 176 IGIGGDPIKGLNFIECLAMFEKDPSTKGIIMVGEIGGTDEELAAEYIQSNI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 +AG TAP G+ MGHAGA+ISG G AEDKI +++AG IA SP+ +G + +++ L Sbjct: 232 AHIAGITAPKGKRMGHAGAIISGNTGKAEDKIRCLEKAGALIARSPSDMGSMINKVMIQL 291 >gi|56416521|ref|YP_153595.1| succinyl-CoA ligase chain A [Anaplasma marginale str. St. Maries] gi|222474889|ref|YP_002563304.1| succinyl-CoA ligase chain A (sucD) [Anaplasma marginale str. Florida] gi|255002861|ref|ZP_05277825.1| succinyl-CoA ligase chain A (sucD) [Anaplasma marginale str. Puerto Rico] gi|56387753|gb|AAV86340.1| succinyl-CoA ligase chain A [Anaplasma marginale str. St. Maries] gi|222419025|gb|ACM49048.1| succinyl-CoA ligase chain A (sucD) [Anaplasma marginale str. Florida] Length = 294 Score = 305 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 188/299 (62%), Positives = 230/299 (76%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNT+V+ QG TG GTFH+EQAI Y T+VVGG+ P KG T G +PVF Sbjct: 1 MSVLVDKNTRVICQGFTGSNGTFHSEQAIAY-GTKVVGGVTPGKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +AK T ANASVIYVP A DAI E+IEAEI LIVCITEGIPVLDMV+VK L S Sbjct: 56 TVLQAKVETQANASVIYVPAPYAADAIFEAIEAEIELIVCITEGIPVLDMVQVKRALAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR+IGPNCPGI+TP+ CKIGIMPG I +KG++G++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRMIGPNCPGIITPEECKIGIMPGYIHKKGNIGVVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+D ++LFL DE T IV++GEIGGS EEEA +FL+ G KKP+V Sbjct: 176 IGIGGDPVHGMSFLDCVQLFLEDEDTHGIVIIGEIGGSEEEEAVEFLQ---SSGTKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GFVAG+TAPPG+ MGHAGA+ SG G A+ KI MK AG+ +A +PA IG+++++++G Sbjct: 233 GFVAGQTAPPGKRMGHAGAISSGSSGTAKGKIEFMKRAGVAVAETPAVIGKTVLDVMGK 291 >gi|296274211|ref|YP_003656842.1| succinyl-CoA synthetase subunit alpha [Arcobacter nitrofigilis DSM 7299] gi|296098385|gb|ADG94335.1| succinyl-CoA synthetase, alpha subunit [Arcobacter nitrofigilis DSM 7299] Length = 290 Score = 305 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 165/296 (55%), Positives = 213/296 (71%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKVLVQGLTG +FHT++AI Y T VV G+ P K +++PV+ Sbjct: 1 MAILIDKNTKVLVQGLTGSQASFHTQRAIAY-GTNVVSGVVPGKRGQRH----LDLPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV AK T ANAS+IYVP DAIIE+ E I IVCITEGIP +DM+ +KA ++ + Sbjct: 56 TVECAKRLTGANASIIYVPAPFCKDAIIEASENGIETIVCITEGIPTIDMLDIKAVVDLN 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP+ CK+GIMP SI GSVGI+SRSGTLTYEAV Q++ G GQST Sbjct: 116 GSRLIGPNCPGIITPNQCKMGIMPESIHMAGSVGIVSRSGTLTYEAVNQSTLAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV G++FID+L++F D T++IVM+GEIGG+ EE AA+++K KP+V Sbjct: 176 VGIGGDPVPGSDFIDILKMFEEDPDTKAIVMIGEIGGAKEEAAAEYIKYNI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++AG TAP G+ MGHAGA+I GGKG AE+K A++ AG+ + IG +L E+ Sbjct: 232 SYIAGVTAPKGKRMGHAGAIIDGGKGTAEEKYLALERAGVTTVRTITAIGAALKEV 287 >gi|226372794|gb|ACO52022.1| Succinyl-CoA ligase subunit alpha, mitochondrial precursor [Rana catesbeiana] Length = 325 Score = 305 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 177/298 (59%), Positives = 224/298 (75%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DK+TKV+ QG TGK GTFH++QA+ Y T++VGG+ P KG G +PVF +V Sbjct: 29 LYIDKDTKVICQGFTGKQGTFHSQQALEY-GTKLVGGVSPGKGGKTHLG----LPVFNSV 83 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 AEAK T A ASVIYVPP A AI ESI+AE+PL+VCITEGIP DMVRVK RL +++ Sbjct: 84 AEAKAGTGATASVIYVPPPFAAAAIHESIDAEMPLVVCITEGIPQQDMVRVKHRLLRQTT 143 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 144 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 203 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID E+FL D TE I+++GEIGGSAEE AA +LK+ KP+V Sbjct: 204 GIGGDPFNGTNFIDCPEVFLNDPKTEGIILIGEIGGSAEENAANYLKEHNCGSNAKPVVS 263 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 264 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQRAGVVVSMSPAQLGSTMHKEFEK 321 >gi|226530690|ref|NP_001141184.1| hypothetical protein LOC100273271 [Zea mays] gi|194703138|gb|ACF85653.1| unknown [Zea mays] Length = 333 Score = 305 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 175/299 (58%), Positives = 220/299 (73%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I +DKNTKV+ QG TGK GTFH++QA+ Y V G ++ +PVF T Sbjct: 36 NIYIDKNTKVICQGFTGKQGTFHSQQALEYGTKLVGGT-----TPGKGGKKHLGLPVFNT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DMVRVK +L + Sbjct: 91 VKEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHKLTRQG 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++FL D ATE IV++GEIGG AEE AA+FLK+ + KP+V Sbjct: 211 IGIGGDPFNGTNFIDCLDVFLKDPATEGIVLIGEIGGHAEENAAEFLKEHNSGPKAKPVV 270 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G + + Sbjct: 271 SFIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVIVSMSPAQLGTCMYKEFEK 329 >gi|88811119|ref|ZP_01126375.1| Succinyl-CoA ligase, alpha subunit [Nitrococcus mobilis Nb-231] gi|88791658|gb|EAR22769.1| Succinyl-CoA ligase, alpha subunit [Nitrococcus mobilis Nb-231] Length = 290 Score = 305 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 172/297 (57%), Positives = 214/297 (72%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDK TKV+VQG TG+ GTFH EQ I Y TQ+VGG+ P +G ++ PVF Sbjct: 1 MSILVDKGTKVIVQGFTGRQGTFHAEQCISY-GTQIVGGVTPGRGGERH----LDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA A+AS+IYVP A DAI+E+ E I +I CITEGIPV DM+RVKA L Sbjct: 56 TVREAVASVHADASMIYVPAVYAADAILEAAEGGIRVIACITEGIPVQDMLRVKAALTYY 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPG++TP CKIGIMPG I + GS+GI+SRSGTLTYEAV Q + GLGQST Sbjct: 116 DAILVGPNCPGVITPGECKIGIMPGQIHKAGSIGIVSRSGTLTYEAVKQITDIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP++G F+DVL+ F D T+ IVMVGEIGG++EEEAA+F++ + KP+V Sbjct: 176 VGIGGDPIQGLSFVDVLQRFEQDRQTKGIVMVGEIGGTSEEEAAEFIESNVR----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VAG TAPPG+ MGHAGA+ISGGKG A+DK A+ +AG+ SPA IG ++ E Sbjct: 232 AYVAGVTAPPGKRMGHAGAIISGGKGMAKDKFTALVKAGVATVRSPAEIGSTMNEFF 288 >gi|94313283|ref|YP_586492.1| succinyl-CoA synthetase, subunit alpha [Cupriavidus metallidurans CH34] gi|93357135|gb|ABF11223.1| succinyl-CoA synthetase, alpha subunit [Cupriavidus metallidurans CH34] Length = 290 Score = 304 bits (779), Expect = 8e-81, Method: Composition-based stats. Identities = 187/297 (62%), Positives = 230/297 (77%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D++T+V+ QG TG GTFH+EQA+ Y T++VGG+ P KG G +PVF Sbjct: 1 MAVLIDQHTRVICQGFTGAQGTFHSEQALAY-GTKMVGGVTPGKGGETHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+ A T A+ASVIYVPP A DAI+E+++A I LIVCITEGIPV+DMVRVK L S Sbjct: 56 TVSAAAHATGADASVIYVPPPFAADAILEAVDAGIGLIVCITEGIPVIDMVRVKRALSGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRL+GPNCPG++TP CKIGIMPG I + G +G++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 ASRLVGPNCPGVITPGQCKIGIMPGHIHKPGRIGVVSRSGTLTYEAVAQTTATGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT FID LELFLAD+ TE I+M+GEIGGSAEEEAAQFL+D R KP+V Sbjct: 176 IGIGGDPVNGTNFIDSLELFLADDQTEGIIMIGEIGGSAEEEAAQFLRDARTR---KPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPGR MGHAGA+ISGG G AE KI AM+EAGI +A SPA +G ++ + Sbjct: 233 GFIAGSTAPPGRRMGHAGAIISGGTGTAEAKIEAMREAGIHVAASPAELGNTMAAAM 289 >gi|15834829|ref|NP_296588.1| succinyl-CoA synthetase subunit alpha [Chlamydia muridarum Nigg] gi|270284995|ref|ZP_06194389.1| succinyl-CoA synthetase subunit alpha [Chlamydia muridarum Nigg] gi|270289018|ref|ZP_06195320.1| succinyl-CoA synthetase subunit alpha [Chlamydia muridarum Weiss] gi|301336392|ref|ZP_07224594.1| succinyl-CoA synthetase subunit alpha [Chlamydia muridarum MopnTet14] gi|7190246|gb|AAF39081.1| succinyl-CoA synthetase, alpha chain [Chlamydia muridarum Nigg] Length = 291 Score = 304 bits (779), Expect = 8e-81, Method: Composition-based stats. Identities = 158/299 (52%), Positives = 214/299 (71%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M L++K+ ++ QG+TGKAG+FHT Q + Y + VGG+ P KG T + +++P+F Sbjct: 1 MLELLNKDLPIITQGITGKAGSFHTTQCVAY-GSNFVGGVTPGKGGTQF----LDLPIFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK+ T AS+I+VPP A +AI E+ +A I LIVCITEGIPV DM+ V + +EKS Sbjct: 56 SVLEAKQATGCRASMIFVPPPFAAEAIFEAEDAGIELIVCITEGIPVQDMLAVNSLMEKS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S RL+GPNCPG++ P +CKIGIMPG I G+VG++SRSGTLTYEAV+Q +Q +GQS Sbjct: 116 SCRLVGPNCPGVIKPGACKIGIMPGYIHLPGNVGVISRSGTLTYEAVWQLTQRKIGQSVC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FIDVL+ DE TE+I+M+GEIGGSAEE+AA ++ KP++ Sbjct: 176 IGIGGDPLNGTSFIDVLQELEKDEQTEAILMIGEIGGSAEEDAADWISQHCS----KPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAP G+ MGHAGA+ISG G A K A++EAG+ + SPA IG ++ +L S Sbjct: 232 AFIAGATAPKGKRMGHAGAIISGNSGDAFSKQRALREAGVVVVESPALIGEAVASVLNS 290 >gi|118431319|ref|NP_147697.2| succinyl-CoA synthetase alpha chain [Aeropyrum pernix K1] gi|116062642|dbj|BAA80057.2| succinyl-CoA synthetase alpha chain [Aeropyrum pernix K1] Length = 292 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 138/298 (46%), Positives = 200/298 (67%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD T+VLVQG+TG+ G+FH + A+L T+VV G+ P KG + G VPV+ Sbjct: 1 MAVLVDSETRVLVQGITGREGSFHAK-AMLEYGTKVVAGVTPGKGGSEVHG----VPVYD 55 Query: 61 TVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA E N S+++VP A DA+ E+++A I L+V ITEGIPV D +R + Sbjct: 56 SVKEALAEHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQ 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +IGPNCPG +TP K+GIMPG IF++G V ++SRSGTLTYE + +++G+GQST Sbjct: 116 KGATIIGPNCPGAITPGQAKVGIMPGHIFKEGGVAVVSRSGTLTYEISYMLTRQGIGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G F + L+LF D TE++V++GEIGG EE AA+ +K K KP+ Sbjct: 176 VIGIGGDPIVGLSFTEALKLFQEDPQTEALVLIGEIGGDMEERAAEMIK---KGEFTKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + ++AG+TAPP + MGHAGA+I G G E K+ A++EAG+ +A +P + + + L Sbjct: 233 IAYIAGRTAPPEKRMGHAGAIIMMGTGTYEGKVKALREAGVEVAETPFEVPELVRKAL 290 >gi|269959064|ref|YP_003328853.1| succinyl-CoA synthetase, alpha subunit [Anaplasma centrale str. Israel] gi|269848895|gb|ACZ49539.1| succinyl-CoA synthetase, alpha subunit [Anaplasma centrale str. Israel] Length = 293 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 188/299 (62%), Positives = 230/299 (76%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNT+V+ QG TG GTFH+EQAI Y T+VVGG+ P KG T G +PVF Sbjct: 1 MSVLVDKNTRVICQGFTGSNGTFHSEQAIAY-GTKVVGGVTPGKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +AK T ANASVIYVP A DAI E+IEAEI LIVCITEGIPVLDMV+VK L S Sbjct: 56 TVLQAKVETQANASVIYVPAPYAADAIFEAIEAEIELIVCITEGIPVLDMVQVKRALAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR+IGPNCPGI+TP+ CKIGIMPG I +KG++G++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRMIGPNCPGIITPEECKIGIMPGYIHKKGNIGVVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+D ++LFL DE T IV++GEIGGS EEEA +FL+ G KKP+V Sbjct: 176 IGIGGDPVHGMSFLDCVQLFLEDEDTHGIVIIGEIGGSEEEEAVEFLQ---SSGTKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GFVAG+TAPPG+ MGHAGA+ SG G A+ KI MK AG+ +A +PA IG+++++++G Sbjct: 233 GFVAGQTAPPGKRMGHAGAISSGSSGTAKGKIEFMKRAGVAVAETPAVIGKTVLDVMGK 291 >gi|293370302|ref|ZP_06616859.1| succinyl-CoA synthetase subunit alpha [Bacteroides ovatus SD CMC 3f] gi|299145916|ref|ZP_07038984.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Bacteroides sp. 3_1_23] gi|292634597|gb|EFF53129.1| succinyl-CoA synthetase subunit alpha [Bacteroides ovatus SD CMC 3f] gi|298516407|gb|EFI40288.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Bacteroides sp. 3_1_23] Length = 286 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 147/295 (49%), Positives = 211/295 (71%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+++VQG+TG+ G FH ++ Y T VVGG P KG T G +PVF Sbjct: 1 MSILIDKSTRLIVQGITGRDGLFHAKKMKEY-GTNVVGGTSPGKGGTDVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A E+T AN S+I+VP A DAI+E+ +A I +IVCI EGIP LD+++ E+ Sbjct: 56 TMYDAVEQTKANTSIIFVPARFAADAIMEAADAGIRIIVCIAEGIPTLDVIKAHQFAEQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P +GI+PG +F +G+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAMLIGPNCPGLISPGKSMVGILPGQVFLEGNVGVISRSGTLTYEIVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F +LE+F D TE+IV++GEIGG+AEE+AA+++++ KP+V Sbjct: 176 IGIGGDPVVGLHFRQLLEMFQNDPETEAIVLIGEIGGNAEEQAAEYIRNNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG++APPG+ MGHAGA+ISG G A++KI +++ AGI +A P+ I + L Sbjct: 232 AFIAGQSAPPGKQMGHAGAIISGSSGSAKEKIKSLEAAGIRVAQEPSDIPKLLKR 286 >gi|308272219|emb|CBX28825.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [uncultured Desulfobacterium sp.] Length = 292 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 165/300 (55%), Positives = 213/300 (71%), Gaps = 10/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI V+ NT+++VQG+TGK G FHT Q + Y T VV G+ P KG +VPVF Sbjct: 1 MSIFVNNNTRLVVQGVTGKEGQFHTRQCVAY-GTSVVAGVTPGKGGQKMD----DVPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T AN S+I+VPP A DAI+ES +A I LIV ITEGIPV+DM++VK + Sbjct: 56 TVNEAVKKTEANCSMIFVPPPFAADAIMESADAGIELIVVITEGIPVMDMMKVKKYISGG 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS-VGILSRSGTLTYEAVFQTSQEGLGQST 179 SR+IGPNCPGI+TP CK+GIMPG I + G +G++SRSGTLTYE V Q +Q+G+GQ+T Sbjct: 116 KSRIIGPNCPGIITPGECKVGIMPGHIHKPGGPIGVVSRSGTLTYEVVHQLTQKGIGQTT 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT FID L+ F DE T+ IVMVGEIGG++EEEA++F+ KP+ Sbjct: 176 CIGIGGDPVNGTSFIDCLDAFQKDEQTKGIVMVGEIGGTSEEEASEFILKNV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 +GF+AG TAPPGR MGHAGA+ISG G A+ KI AMK++GI I + +G V + + Sbjct: 232 IGFIAGITAPPGRRMGHAGAIISGKSGTAQGKIEAMKKSGIHICENLGALGEICVSVFKN 291 >gi|296115263|ref|ZP_06833903.1| succinyl-CoA synthetase, alpha subunit [Gluconacetobacter hansenii ATCC 23769] gi|295978166|gb|EFG84904.1| succinyl-CoA synthetase, alpha subunit [Gluconacetobacter hansenii ATCC 23769] Length = 290 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 195/298 (65%), Positives = 231/298 (77%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+ +TKV+ QG TG GTFHTEQAI Y T++VGG+ P KG G +PVF Sbjct: 1 MSILVNSSTKVITQGFTGAQGTFHTEQAIAY-GTRMVGGVTPGKGGEVHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A+E T A+ASVIYVPP+GA DAI+E+I AEIPLIVCITEGIPVLDMVRV+ LE+S Sbjct: 56 TVAQAREATGADASVIYVPPAGAADAILEAIAAEIPLIVCITEGIPVLDMVRVRMALERS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SS L+GPNCPG++TP CKIGIMPG I R+G VGI+SRSGTLTYEAV QTS G GQST Sbjct: 116 SSLLVGPNCPGVITPGECKIGIMPGPIHRRGHVGIVSRSGTLTYEAVAQTSAIGQGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKG +F DVLE +AD T SIVM+GEIGG++E E A+ ++ G KKP+V Sbjct: 176 VGIGGDPVKGMDFTDVLERLIADPDTHSIVMIGEIGGTSEIEGAELIRA---SGTKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAPPGR MGHAGAVI+GG A KI AM+EAGI I+ SPA +G +L +LG Sbjct: 233 GFIAGATAPPGRRMGHAGAVITGGHETAAAKIEAMREAGIHISASPAELGTTLARILG 290 >gi|190571355|ref|YP_001975713.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018751|ref|ZP_03334559.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357627|emb|CAQ55068.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995702|gb|EEB56342.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 293 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 179/298 (60%), Positives = 230/298 (77%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+T+++ QG TG GTFH+EQAI Y T++VGG+ P KG + +N+PVF Sbjct: 1 MSVLVNKDTRLICQGFTGAQGTFHSEQAIDY-GTKMVGGVTPGKGGSTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAKE+T ANA+VIYVP A AI+E+I+A+I LI+CITEGIP+LDMV+VK L S Sbjct: 56 TVAEAKEKTCANATVIYVPAKFAAAAILEAIDAKIELIICITEGIPILDMVKVKHALAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPG++TP+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 NSRLIGPNCPGVITPEECKIGIMPGHIHKRGHIGIMSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+D +ELFL D+ T IV++GEIGG+ EE+ + F+K E KKPIV Sbjct: 176 IGIGGDPVHGMTFVDCMELFLKDDDTHGIVVIGEIGGNEEEDVSHFVKTEK---TKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GFVAG+TAPPGR MGHAGA+IS G A K+ M+ AGI IA +PA IG+ ++E++ Sbjct: 233 GFVAGQTAPPGRRMGHAGAIISSSGGSAGAKLEVMRSAGIAIAETPAVIGKKVLEVMS 290 >gi|195375548|ref|XP_002046562.1| GJ12416 [Drosophila virilis] gi|194153720|gb|EDW68904.1| GJ12416 [Drosophila virilis] Length = 328 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 171/300 (57%), Positives = 230/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLNGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+ T +A+VIYVPP GA AI+E++EAEIPLIVCITEG+P DMV+VK+ L + Sbjct: 86 VAEAKKATDPHATVIYVPPPGAAAAIMEALEAEIPLIVCITEGVPQHDMVKVKSALVSQD 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPDTKGIILIGEIGGVAEEKAADYLTEFNTGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 266 SFIAGISAPPGRRMGHAGAIISGGKGGANDKIEALEKAGVIVTRSPAKMGYELFKEMKRL 325 >gi|225707744|gb|ACO09718.1| Succinyl-CoA ligase subunit alpha, mitochondrial precursor [Osmerus mordax] Length = 324 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 225/298 (75%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DKNTKV+ QG TGK GTFH++Q++ Y +++VGG+ P KG G +PVF +V Sbjct: 28 LYIDKNTKVICQGFTGKQGTFHSQQSLDY-GSKLVGGVSPGKGGKTHLG----LPVFNSV 82 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 EA+E T A+A+VIYVPP A AIIE+++AE+PL+VCITEGIP DMVRVK +L + Sbjct: 83 KEAREGTGAHATVIYVPPPFAAAAIIEAVDAEMPLVVCITEGIPQQDMVRVKHKLLRQGI 142 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS + Sbjct: 143 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCI 202 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE+FL D TE I+++GEIGG+AEE AA++LK KP+V Sbjct: 203 GIGGDPFNGTNFIDCLEVFLMDPKTEGIILIGEIGGNAEENAAEYLKQHNSGANAKPVVS 262 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 263 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTMFKEFEK 320 >gi|195016311|ref|XP_001984386.1| GH16428 [Drosophila grimshawi] gi|193897868|gb|EDV96734.1| GH16428 [Drosophila grimshawi] Length = 328 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 169/300 (56%), Positives = 229/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLNGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VA+AK+ T +A+VIYVPP GA AI+E+++AEIPLIVCITEG+P DMV+VK L + Sbjct: 86 VADAKKATDPHATVIYVPPPGAAAAIMEALDAEIPLIVCITEGVPQHDMVKVKHALISQD 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLTEFNTGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 266 SFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGYELFKEMTRL 325 >gi|46446931|ref|YP_008296.1| succinate-CoA ligase (ADP-forming) alpha chain [Candidatus Protochlamydia amoebophila UWE25] gi|46400572|emb|CAF24021.1| probable succinate-CoA ligase (ADP-forming) alpha chain [Candidatus Protochlamydia amoebophila UWE25] Length = 301 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 177/298 (59%), Positives = 227/298 (76%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+K T+V+ QG+TGKAG FHTEQ++LY T V G + P KG +G +PVF Sbjct: 1 MAILVNKQTRVITQGITGKAGRFHTEQSMLYAPTYVGG-VTPGKGGEEISG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK++T NAS+I+VPP A +AI+E+ EA I LIVCITEGIP+ DM++V + S Sbjct: 56 TVWEAKQKTQCNASLIFVPPPFAAEAILEAEEAGIELIVCITEGIPIQDMLKVSQVMRAS 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + RLIGPNCPG++TP CK+GIMPG I +KG+VGI+SRSGTLTYEAV+QT+Q GLGQST Sbjct: 116 QTSRLIGPNCPGVITPGECKMGIMPGYIHQKGNVGIVSRSGTLTYEAVWQTTQLGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT FIDVL+LF D T++I+++GEIGG AEEEAA+++K KPI Sbjct: 176 CVGIGGDPLNGTNFIDVLKLFENDSETDAILLIGEIGGKAEEEAAEWIKQFCS----KPI 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAP GR MGHAGA++SGGKG A DKI +K+AG+ IA +PA +G S+ LL Sbjct: 232 AAFIAGQTAPIGRRMGHAGAIVSGGKGTASDKIKTLKQAGVLIAETPADMGLSVQLLL 289 >gi|149928246|ref|ZP_01916490.1| succinyl-CoA synthetase alpha subunit [Limnobacter sp. MED105] gi|149823052|gb|EDM82293.1| succinyl-CoA synthetase alpha subunit [Limnobacter sp. MED105] Length = 295 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 166/303 (54%), Positives = 223/303 (73%), Gaps = 12/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCREYANGKNCFVAGVNPKKAGEDFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TVA+AK++T ANASVIYVPP A AI E++EA++ L++CITEGIPV DM+ V+ R+ Sbjct: 57 YGTVADAKKQTGANASVIYVPPPFAAAAIWEAVEADLDLVICITEGIPVRDMIEVRDRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + ++GPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q S+ GLG Sbjct: 117 REGRKTIVVGPNCPGVITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLSELGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QSTAVGIGGDPV G + IDV+ +F D T+++VM+GEIGGS EEEAA ++KD K Sbjct: 177 QSTAVGIGGDPVNGLKHIDVMRMFNDDPDTDAVVMIGEIGGSDEEEAALWVKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGGKG A++K+ M+E GI + P+ +G+ L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGAIISGGKGTAQEKLAIMEECGITVTKDPSVMGQLLKKA 292 Query: 297 LGS 299 +G+ Sbjct: 293 IGA 295 >gi|239817448|ref|YP_002946358.1| succinyl-CoA synthetase subunit alpha [Variovorax paradoxus S110] gi|239804025|gb|ACS21092.1| succinyl-CoA synthetase, alpha subunit [Variovorax paradoxus S110] Length = 299 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 158/298 (53%), Positives = 210/298 (70%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+T+V+ QG+TGK G FHT Y Q V G++P K + G +PV Sbjct: 1 MSILINKHTRVITQGITGKTGQFHTAMCRDYANGQKCFVAGVNPNKAGKSFDG----IPV 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV EAK T A SVIYVPP A AI E+++A + L+VCITEGIPV DM+R + R+E Sbjct: 57 FGTVKEAKAETGATVSVIYVPPPFAAAAIDEAVDAGLDLVVCITEGIPVRDMIRTRHRME 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S + L+GPNCPG++TP+ KIGIMPG I +KG +G++SRSGTLTYEA Q + G+GQS Sbjct: 117 GSKTLLLGPNCPGLITPEEIKIGIMPGHIHQKGRIGVVSRSGTLTYEAASQLASFGIGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV G IDVL++F D T++++MVGEIGGS EE A+++ + + KP Sbjct: 177 TVVGIGGDPVGGLRHIDVLKMFNDDPRTDAVIMVGEIGGSDEETCARWISEHMR----KP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +VGF+AG +APPG+ MGHAGA++SGGKG A +K+ MKE GI + +PA +G+ L L Sbjct: 233 VVGFIAGASAPPGKRMGHAGAIVSGGKGTAREKLAVMKECGIHVTDNPAEMGKLLASL 290 >gi|221633776|ref|YP_002523002.1| succinyl-CoA synthetase subunit alpha [Thermomicrobium roseum DSM 5159] gi|221157054|gb|ACM06181.1| succinyl-CoA synthetase alpha chain [Thermomicrobium roseum DSM 5159] Length = 291 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 164/299 (54%), Positives = 215/299 (71%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVD++T++LVQG+TGK G+FHT Q I Y T+VV G+ P G G VPVF Sbjct: 1 MAILVDESTRLLVQGITGKEGSFHTGQMIEY-GTRVVAGVTPGAGGRVVHG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T N S I VP A DAI+E+ +A IPLIVCITEGIPVL+M+RV + + Sbjct: 56 TVTDAVAATQPNVSFIAVPAPFAPDAILEAADAGIPLIVCITEGIPVLEMLRVYHAVRQR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG+++P K+GIMPG I G VGI+SRSGTLTYE V+ ++ G+GQS+A Sbjct: 116 GVRLIGPNCPGLISPGKAKVGIMPGFIHTPGPVGIVSRSGTLTYEVVWALTRAGIGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F+DVLELF D T +IV++GEIGG+ EE AA +++++ KP+V Sbjct: 176 VGIGGDPIIGTSFVDVLELFENDPETRAIVLIGEIGGADEEAAAAYIREQV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+ISGG+G A +KI A++ AG+ +A PA I + E+L + Sbjct: 232 GFIAGRTAPPGRRMGHAGAIISGGRGTAAEKIAALEAAGVHVAERPAEIADLMREILAN 290 >gi|71029306|ref|XP_764296.1| succinyl-CoA synthetase subunit alpha [Theileria parva strain Muguga] gi|68351250|gb|EAN32013.1| succinyl-CoA synthetase, alpha subunit, putative [Theileria parva] Length = 329 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 159/301 (52%), Positives = 218/301 (72%), Gaps = 7/301 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW--TGGNVNVPVFT 60 + +DK+TK++ QGLTGK +FHT + + Y T+ VGG++PKKG + W +P+F+ Sbjct: 31 VYIDKDTKIICQGLTGKQASFHTTECLKYYGTKFVGGVNPKKGGSSWKSLDDKHTLPIFS 90 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 +V+EAK+ T A+ASVIYVPP GA DAI+E+IEAE+PL++CITEGIP DMV+VK L+ Sbjct: 91 SVSEAKKETGADASVIYVPPPGAADAIVEAIEAELPLVICITEGIPQHDMVKVKTLLKDP 150 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPGI+ P+ CKIGIMPG I +KG VGI+SRSGTLTYEAV QT++ GLGQS Sbjct: 151 YCKTTLIGPNCPGIIKPEECKIGIMPGHIHKKGVVGIISRSGTLTYEAVTQTTEIGLGQS 210 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GIGGDP G F D ++ F+ + T+ I+++GEIGG+AEE+ A ++K KP Sbjct: 211 VCIGIGGDPFGGITFTDAMKKFVKNPETKGILIIGEIGGTAEEDVADWIKAN---PTDKP 267 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +AG +APPG+ MGHAGA+ISG KG A KI A+++AG+ + SPA +G ++ L Sbjct: 268 VVAIIAGISAPPGKRMGHAGAIISGNKGTAHGKIEALRDAGVVVPNSPAEMGLAMFNALK 327 Query: 299 S 299 Sbjct: 328 K 328 >gi|308499010|ref|XP_003111691.1| hypothetical protein CRE_03008 [Caenorhabditis remanei] gi|308239600|gb|EFO83552.1| hypothetical protein CRE_03008 [Caenorhabditis remanei] Length = 321 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 172/297 (57%), Positives = 221/297 (74%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +++++K+TKV+VQG TG+ GTFH++Q + Y T VVGG+ P K G +PVF T Sbjct: 28 NLMINKSTKVIVQGFTGRQGTFHSKQMLEY-NTNVVGGVSPNKAGQTHLG----LPVFGT 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAKERT A+A+VIYVP +GA AI E+++AEI LIV ITEGIP DMVRVK RL +++ Sbjct: 83 VAEAKERTGADATVIYVPAAGAARAIHEAMDAEIGLIVAITEGIPQQDMVRVKNRLLKQN 142 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 143 KSRLLGPNCPGIIASGDCKIGIMPGHIHKKGCIGIVSRSGTLTYEAVHQTTAVGLGQTRC 202 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D T+ I+++GEIGG AEE+AA FLK KP+V Sbjct: 203 IGIGGDPFNGTNFIDCLEVFLEDNETKGIILIGEIGGQAEEQAADFLKSRNSGPNAKPVV 262 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+I+GGKG A DKI A++ A + + SPA++G ++ + L Sbjct: 263 SFIAGVTAPPGRRMGHAGAIIAGGKGTAGDKIEALRNANVVVTDSPAKLGVAMQKAL 319 >gi|313203889|ref|YP_004042546.1| succinyL-CoA synthetase, alpha subunit [Paludibacter propionicigenes WB4] gi|312443205|gb|ADQ79561.1| succinyl-CoA synthetase, alpha subunit [Paludibacter propionicigenes WB4] Length = 291 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 153/299 (51%), Positives = 206/299 (68%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTK+LVQG+TG+ G FHT + Y T VV G+ P K G VPVF Sbjct: 1 MSILVNKNTKLLVQGITGRDGKFHTGKMREY-GTNVVAGVSPGKEGVVLDG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VA A E T AN S+I+VP + A DAI+E+ EA I L++ I+EG+P+ DM+R+ L+++ Sbjct: 56 SVASAVEATGANTSIIFVPAAFAADAILEASEAGIELVIAISEGLPIQDMIRITPILKQN 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG++TP +GI+P +IF+KG++G +SRSGTLTYE V ++ GQ+T Sbjct: 116 GTLLIGPNCPGLITPGESLVGILPANIFKKGNIGFISRSGTLTYEVVNLLTENDFGQTTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV G FID+LE F D T ++V++GEIGG AEE+AAQF+ D KP+V Sbjct: 176 VGIGGDPVAGLYFIDLLERFENDPETIAVVVIGEIGGDAEEQAAQFIAD----KMTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAPPG+ MGHAGA+IS G G A +KI A +AG+ +A P I L + L + Sbjct: 232 AFIAGQTAPPGKRMGHAGAIISSGSGTAAEKIAAFNKAGVPVAKEPNEIPELLRQKLQN 290 >gi|82703116|ref|YP_412682.1| succinyl-CoA synthetase subunit alpha [Nitrosospira multiformis ATCC 25196] gi|82411181|gb|ABB75290.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nitrosospira multiformis ATCC 25196] Length = 292 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 161/300 (53%), Positives = 220/300 (73%), Gaps = 10/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTE--QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPV 58 M+IL+D+NT+++ QG+TGK G FHT + Y + V G++PKKG + G +P+ Sbjct: 1 MAILIDRNTRIMTQGITGKTGQFHTRMCRDYAYGKECFVAGVNPKKGGEDFDG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV EAK+ T A SVIYVPP A AI E+++AE+ L++CITEGIPV DM+R R+E Sbjct: 57 FGTVEEAKQATGAAVSVIYVPPPFAAAAIDEAVDAELDLVICITEGIPVRDMIRTCHRME 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +RL+GPNCPGI+TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ LGQS Sbjct: 117 GKKTRLVGPNCPGIITPDEIKIGIMPGYIHRKGRIGVVSRSGTLTYEAVAQLMEQELGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDPV G DV++LF D+ T++++MVGEIGG+ EE+ A+++K+ + KP Sbjct: 177 TCIGIGGDPVNGLRHRDVMKLFNEDDETDAVLMVGEIGGTDEEDCARWVKENMR----KP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAPPGR MGHAGAVISGG+G A++K+ ++E GI +A +PA +G+ L LG Sbjct: 233 VVGYIAGLTAPPGRRMGHAGAVISGGRGTAQEKLAVLEECGIKVARNPAEMGKVLKSALG 292 >gi|288924930|ref|ZP_06418866.1| succinyl-CoA synthase, alpha subunit [Prevotella buccae D17] gi|288338120|gb|EFC76470.1| succinyl-CoA synthase, alpha subunit [Prevotella buccae D17] Length = 290 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 148/299 (49%), Positives = 202/299 (67%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNT+++VQG+TG+ G+FH + Y T VVGG P K +G +PVF Sbjct: 1 MSILINKNTRLIVQGITGRDGSFHATKMKEY-GTNVVGGTSPGKAGQEVSG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T AN SVI+VP A DA++E+ +A I LI+CITEG+P LD+V+ + + Sbjct: 56 TVRDAVEATQANTSVIFVPAPFAKDAMMEAADAGINLIICITEGVPTLDVVQAYNYIRQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P+ +GIMP IF+KG G++SRSGTLTYE V+ +Q GLGQSTA Sbjct: 116 GANLIGPNCPGLISPEESMVGIMPTGIFKKGRTGVISRSGTLTYEVVYNLTQSGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ G F D+LE+F D T+SI ++GEIGG AEE AA ++K KP+V Sbjct: 176 VGVGGDPIVGLYFQDLLEMFEKDAETDSIAIIGEIGGDAEERAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F++G+ AP G+ MGHAGA+IS G G A++K+ A + AGI +A A I L L Sbjct: 232 AFISGREAPKGKQMGHAGAIISSGSGTAKEKVAAFEAAGIPVARETAEIPALLKARLEK 290 >gi|295084311|emb|CBK65834.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Bacteroides xylanisolvens XB1A] Length = 286 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 146/295 (49%), Positives = 211/295 (71%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+++VQG+TG+ G FH ++ Y T VVGG P KG G +PVF Sbjct: 1 MSILIDKSTRLIVQGITGRDGLFHAKKMKEY-GTNVVGGTSPGKGGIDVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A E+T AN S+I+VP A DAI+E+ +A I +IVCI EGIP LD+++ E+ Sbjct: 56 TMYDAVEQTKANTSIIFVPARFAADAIMEAADAGIRIIVCIAEGIPTLDVIKAHQFAEQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P +GI+PG +F +G+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAMLIGPNCPGLISPGKSMVGILPGQVFLEGNVGVISRSGTLTYEIVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F +LE+F D TE+IV++GEIGG+AEE+AA+++++ KP+V Sbjct: 176 IGIGGDPVVGLHFRQLLEMFQNDPETEAIVLIGEIGGNAEEQAAEYIRNNV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG++APPG+ MGHAGA+ISG G A++KI +++ AGI +A P+ I + L + Sbjct: 232 AFIAGQSAPPGKQMGHAGAIISGSSGSAKEKIESLEAAGIRVAQEPSDIPKLLKK 286 >gi|58698203|ref|ZP_00373124.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Drosophila ananassae] gi|225630875|ref|YP_002727666.1| succinyl-CoA synthetase, alpha subunit [Wolbachia sp. wRi] gi|58535284|gb|EAL59362.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Drosophila ananassae] gi|225592856|gb|ACN95875.1| succinyl-CoA synthetase, alpha subunit [Wolbachia sp. wRi] Length = 291 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 179/297 (60%), Positives = 228/297 (76%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+T+++ QG TG GTFH+EQAI Y T++VGG+ P KG + +N+PVF Sbjct: 1 MSVLVNKDTRLICQGFTGAQGTFHSEQAIDY-GTKMVGGVTPGKGGSTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAKE+T ANA+VIYVP A AI+E+I+A+I LI+CITEGIP+LDMV+VK L S Sbjct: 56 TVAEAKEKTGANATVIYVPAKFAAAAILEAIDAKIELIICITEGIPILDMVKVKRALIGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRLIGPNCPGIITPEECKIGIMPGHIHKRGHIGIMSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G F+D +ELFL D T IV++GEIGG+ EE+ + F+K E KKPIV Sbjct: 176 IGIGGDPIHGMTFVDCMELFLKDNDTHGIVVIGEIGGNEEEDVSHFVKAEK---TKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GFVAG+TAPPGR MGHAGA+IS G A K+ M+ AGI IA +PA IG+ ++E++ Sbjct: 233 GFVAGQTAPPGRRMGHAGAIISSSGGSAGAKLEVMRSAGIAIAETPAVIGKKVLEVM 289 >gi|119356239|ref|YP_910883.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Chlorobium phaeobacteroides DSM 266] gi|119353588|gb|ABL64459.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Chlorobium phaeobacteroides DSM 266] Length = 299 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 167/304 (54%), Positives = 227/304 (74%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T+++VQG+TG GTFHT Q + Y T VV G+ P KG T + G + Sbjct: 1 MSVLVNKDTRLVVQGITGGEGTFHTSQILEY-GTNVVAGVTPGKGGTIYHGNERDHFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV +A ++ ANA+VI+VP A DAI+E+ +A + +I+CITEGIPV DM++ A Sbjct: 60 VPVFNTVKDAVDKAEANATVIFVPAPFAADAIMEAADAGLKVIICITEGIPVNDMMKAYA 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + L+GPNCPG++TP K+GIMPG I KG++G++SRSGTLTYEAV Q + GL Sbjct: 120 FVKEKGAVLVGPNCPGVITPGEAKVGIMPGFIHMKGTIGVVSRSGTLTYEAVHQLTAVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT FID ++LF D+ TE +VM+GEIGGSAEEEAA+++K Sbjct: 180 GQSTCIGIGGDPIIGTRFIDAIKLFAKDDETEGLVMIGEIGGSAEEEAAEYIKRY----F 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG AEDKI+AM+ AGI + +P IG ++++ Sbjct: 236 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAEDKIHAMEAAGIHMVDNPGDIGTAMLK 295 Query: 296 LLGS 299 LG Sbjct: 296 ALGR 299 >gi|269925409|ref|YP_003322032.1| succinyl-CoA synthetase, alpha subunit [Thermobaculum terrenum ATCC BAA-798] gi|269789069|gb|ACZ41210.1| succinyl-CoA synthetase, alpha subunit [Thermobaculum terrenum ATCC BAA-798] Length = 290 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 158/298 (53%), Positives = 207/298 (69%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNT++LVQG+TG+ G+FHT+Q + Y T VV G+ P G VPV+ Sbjct: 1 MSILVDKNTRLLVQGITGREGSFHTQQMVEY-GTNVVAGVTPGAAGREVCG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T AN S++YVP A DA+ E+ A I LIVCITE IP +D V++ + + Sbjct: 56 TVREAVEATGANTSIVYVPAPFAPDAVYEAASAGISLIVCITEHIPAVDEVKMYHYVREK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+ TP K+GI+PG+I ++G VGI+SRSGTLTYEAV + +GQST Sbjct: 116 GSRLIGPNCPGLTTPGEAKVGIIPGNIHKRGPVGIVSRSGTLTYEAVAALTAADIGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F +VLE+F D T ++V++GEIGG+AEEEAA++++ KP+V Sbjct: 176 VGIGGDPIVGTSFREVLEMFEDDPETHAVVLIGEIGGNAEEEAAEYIRQ-----MTKPVV 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG+TAPPGR MGHAGA+ISGG G AE KI A++ A IA +P++I + L Sbjct: 231 AFIAGRTAPPGRRMGHAGAIISGGSGTAESKIRALEGANAHIAETPSQIAELVEVALA 288 >gi|257453547|ref|ZP_05618837.1| succinate-CoA ligase, alpha subunit family [Enhydrobacter aerosaccus SK60] gi|257449005|gb|EEV23958.1| succinate-CoA ligase, alpha subunit family [Enhydrobacter aerosaccus SK60] Length = 300 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 165/308 (53%), Positives = 216/308 (70%), Gaps = 19/308 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV K+TKVLVQG TGK GT H+EQ+I Y T +VGG+ P KG T ++ PVF Sbjct: 1 MSVLVGKDTKVLVQGFTGKNGTLHSEQSIAY-GTNIVGGVTPGKGGTTH----LDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T ANASVI+VP D+I+E+I + + LIV ITEG+P LDM++ K LE Sbjct: 56 TMDEAVTATGANASVIFVPAPFVLDSIVEAINSGVKLIVVITEGVPTLDMLKAKRYLENV 115 Query: 121 SS----------RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 ++ R++GPNCPG+++P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT Sbjct: 116 NADLQAKGEEIIRMVGPNCPGVISPGKCKIGIMPGHIHQEGKVGIISRSGTLTYEAVAQT 175 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 ++ G GQST +GIGGDP+ G ID L+L D TE+IV++GEIGG+AEEEAA ++KD Sbjct: 176 TKLGFGQSTCIGIGGDPIPGMNQIDALKLLQDDPQTEAIVLIGEIGGTAEEEAAAYVKDH 235 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 KP++G++AG TAP G+ MGHAGA+ISGGKG AE+K A +EAGI P++IG Sbjct: 236 V----TKPVIGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFKAFEEAGIAYTRDPSKIG 291 Query: 291 RSLVELLG 298 + E+ G Sbjct: 292 EKVKEVTG 299 >gi|149184350|ref|ZP_01862668.1| succinyl-CoA synthetase, alpha subunit [Erythrobacter sp. SD-21] gi|148831670|gb|EDL50103.1| succinyl-CoA synthetase, alpha subunit [Erythrobacter sp. SD-21] Length = 296 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 203/300 (67%), Positives = 248/300 (82%), Gaps = 5/300 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNTKV+ QG+TG GTFHT+QA+ Y T++V G+ P KG T ++ +P F Sbjct: 1 MSILVDKNTKVITQGMTGNTGTFHTQQALDY-GTKMVAGVTPGKGGT----DHIGLPQFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK T A AS IYVPP A DAI+E+I+AE+ LIV ITEGIPVLDMV+VKA L S Sbjct: 56 TVAEAKAETGATASCIYVPPPFAADAILEAIDAEMELIVAITEGIPVLDMVKVKAALAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP+ CKIGIMPGSIF+KGSVG++SRSGTLTYEAV QT+ GLGQ+TA Sbjct: 116 KSRLIGPNCPGVLTPEECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVHQTTMVGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT FIDVL+LFL D+ T+SI+M+GEIGGSAEEEAA+F+K EA +GR KP+V Sbjct: 176 VGIGGDPVNGTNFIDVLDLFLDDDDTKSIIMIGEIGGSAEEEAAEFIKQEAAKGRSKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAPPGR MGHAGA++SGG+GGA+DKI AM++AGI ++PSP+ +G +L +L L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVSGGQGGADDKIAAMEDAGIRVSPSPSELGTTLDAMLKEL 295 >gi|42521006|ref|NP_966921.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410747|gb|AAS14855.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Drosophila melanogaster] Length = 291 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 180/297 (60%), Positives = 228/297 (76%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+T+++ QG TG GTFH+EQAI Y T++VGG+ P KG + +N+PVF Sbjct: 1 MSVLVNKDTRLICQGFTGAQGTFHSEQAIDY-GTKMVGGVTPGKGGSTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAKE+T ANA+VIYVP A AI+E+I+A+I LI+CITEGIP+LDMV+VK L S Sbjct: 56 TVAEAKEKTGANATVIYVPAKFAAAAILEAIDAKIELIICITEGIPILDMVKVKRALIGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRLIGPNCPGIITPEECKIGIMPGHIHKRGHIGIMSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+D +ELFL D T IV++GEIGG+ EE+ + F+K E KKPIV Sbjct: 176 IGIGGDPVHGITFVDCMELFLKDNDTHGIVVIGEIGGNEEEDVSHFVKTEK---TKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GFVAG+TAPPGR MGHAGA+IS G A K+ M+ AGI IA +PA IG+ ++E++ Sbjct: 233 GFVAGQTAPPGRRMGHAGAIISSSGGSAGAKLEVMRSAGIAIAETPAVIGKKVLEVM 289 >gi|269837812|ref|YP_003320040.1| succinyl-CoA synthetase, alpha subunit [Sphaerobacter thermophilus DSM 20745] gi|269787075|gb|ACZ39218.1| succinyl-CoA synthetase, alpha subunit [Sphaerobacter thermophilus DSM 20745] Length = 289 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 168/298 (56%), Positives = 213/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD+ T++LVQG+TG+ G+FHT Q I Y T VV G+ P G VPVF Sbjct: 1 MSILVDRQTRLLVQGITGREGSFHTAQMIEY-GTNVVAGVTPGGAGKTVHG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T AN S+IYVP A DAI E+++A I L+VCITE IP LDMV+V +++S Sbjct: 56 TVEEAVRETGANTSIIYVPARFAPDAIYEAVDAGIALVVCITENIPTLDMVKVYHHVKQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TP K+GIMPG I G VG++SRSGTLTYE V +Q GLGQSTA Sbjct: 116 GSRLIGPNCPGLITPGQAKVGIMPGYIHTPGPVGVVSRSGTLTYEVVHALTQAGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F+DVL +F AD AT +IVM+GEIGG+ EE+AA+++K KP+V Sbjct: 176 VGIGGDPIIGTSFVDVLGMFEADPATRAIVMIGEIGGTDEEKAAEYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPG+ MGHAGA+ISGG+G A +KI A+ AG+ +A S ++ + E LG Sbjct: 232 GFIAGRTAPPGKRMGHAGAIISGGQGTAAEKIAALNAAGVPVAESAQQVAELVREALG 289 >gi|195161054|ref|XP_002021385.1| GL25295 [Drosophila persimilis] gi|198465219|ref|XP_002134933.1| GA23751 [Drosophila pseudoobscura pseudoobscura] gi|194118498|gb|EDW40541.1| GL25295 [Drosophila persimilis] gi|198150062|gb|EDY73560.1| GA23751 [Drosophila pseudoobscura pseudoobscura] Length = 328 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 173/300 (57%), Positives = 229/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + ++KV+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLTGDSKVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+ T +A+VIYVPP GA AIIE+++AEIPLIVCITEG+P DMV+VK L +S Sbjct: 86 VAEAKKATDPHATVIYVPPPGAAAAIIEALDAEIPLIVCITEGVPQHDMVKVKHALISQS 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPDTKGIILIGEIGGVAEEKAADYLTEFNTGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 266 SFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKEMKRL 325 >gi|307825852|ref|ZP_07656068.1| succinyl-CoA synthetase, alpha subunit [Methylobacter tundripaludum SV96] gi|307733160|gb|EFO04021.1| succinyl-CoA synthetase, alpha subunit [Methylobacter tundripaludum SV96] Length = 288 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 175/297 (58%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+TKV+ QG TGK GTFH++QA+ Y TQ+VGG+ P++G G +PVF Sbjct: 1 MSILIDKDTKVICQGFTGKQGTFHSQQALDY-GTQLVGGVTPERGGETHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A ASVIYVPP A DAI+E+++A I LIVCITEGIP+L M+RVKA +E + Sbjct: 56 TVQDAVSGTGATASVIYVPPFYAADAILEAVDAGIKLIVCITEGIPILQMLRVKAAMEGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I GS+GI+SRSGTLTYE+V QT+ +GLGQST Sbjct: 116 GVLLIGPNCPGVITPGECKIGIMPGHIHLPGSIGIVSRSGTLTYESVHQTTAQGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G F+DVL F ADE T+ IVMVGEIGG EEEAA+++K KP+V Sbjct: 176 VGIGGDPIHGMNFVDVLSRFQADEQTKGIVMVGEIGGGEEEEAAEYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG+TAPPG+ MGHAGA+++GGKG AE K+ A+K AGI + SP IG ++ L Sbjct: 232 AYIAGQTAPPGKRMGHAGAIVTGGKGTAEGKVAALKAAGIEVVSSPTDIGVAMKGCL 288 >gi|225557817|gb|EEH06102.1| succinyl-CoA ligase alpha-chain [Ajellomyces capsulatus G186AR] Length = 331 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 172/294 (58%), Positives = 222/294 (75%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T VVGG +PKK G PVF T Sbjct: 36 NLRINSDTKVIYQGFTGKQGTFHAQQAIDY-GTNVVGGTNPKKAGQTHLGK----PVFAT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A +I E+IE+E+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 91 VRDAVKETGATASAIFVPPPLAAKSIEEAIESEVPLVVCITEGIPQHDMVRITDILKTQN 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLK E K + KP V Sbjct: 211 VGIGGDPFSGTNFIDCLKVFLNDEETDGIIMIGEIGGSAEEDAAEFLKQENK--KNKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L+ Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALESAGVIVERSPAALGKTLL 322 >gi|108804114|ref|YP_644051.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Rubrobacter xylanophilus DSM 9941] gi|108765357|gb|ABG04239.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rubrobacter xylanophilus DSM 9941] Length = 292 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 152/299 (50%), Positives = 207/299 (69%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL D+NT++LVQG+TG+ G FHT + +L T+VV G+ P KG + G VPVF Sbjct: 1 MAILADQNTRLLVQGITGREGAFHTRR-MLGSGTRVVAGVTPGKGGQSFEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+ A T AN S+I+VP A DAI E+++A I + CITEG+PV DM++V L+ Sbjct: 56 TVSRAVRETGANTSIIFVPAPFAADAIYEALDAGIEAVCCITEGVPVHDMMKVTDYLKLR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPGI +P + IMP IF G VG++SRSGTLTY+ V + +Q GLGQSTA Sbjct: 116 GATLIGPNCPGIFSPGKANVSIMPADIFSPGGVGVVSRSGTLTYQIVNELTQIGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT+FI+VL F AD TE +VM+GEIGG+AE+ AA+++ E + P+V Sbjct: 176 VGIGGDPIIGTDFIEVLRKFEADPETECVVMIGEIGGNAEQRAAEYISSEMET----PVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+TMGHAGA++SGG+ A+ K A++ AGI A +P+ + R + E LG Sbjct: 232 AYIAGFTAPEGKTMGHAGAIVSGGETTAQAKSEALRRAGIRAAENPSEVARLVAEALGR 290 >gi|225874176|ref|YP_002755635.1| succinyl-CoA synthetase alpha chain [Acidobacterium capsulatum ATCC 51196] gi|225792317|gb|ACO32407.1| succinyl-CoA synthetase alpha chain [Acidobacterium capsulatum ATCC 51196] Length = 291 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 168/299 (56%), Positives = 226/299 (75%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+K T+++VQG+TGK GTFH + Y T+VVGG+ P KG T G PVF Sbjct: 1 MAVLVNKETRLIVQGITGKEGTFHAKGCAEY-GTKVVGGVTPGKGGTTHEG----WPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T ANA+VI+VPP A DAI+E+ EA +PLI+CITEGIPV DMV+V + L+ S Sbjct: 56 TVQKAVEETGANATVIFVPPPFAADAILEANEAGLPLIICITEGIPVNDMVKVWSVLKHS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S L+GPNCPG+++P KIGIMPG I ++G+VGI+SRSGTLTYEAV+Q +Q G+GQSTA Sbjct: 116 KSTLVGPNCPGVISPGKAKIGIMPGRIHKEGNVGIVSRSGTLTYEAVYQLTQRGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT +D L+L D TE+I+++GEIGG+AEE AA+++++ KKP+V Sbjct: 176 IGIGGDPIIGTTHVDALKLLNEDSETEAIILIGEIGGTAEETAAEYVRNHV----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+ISGG+G A +K+ A+ AGI + SPA IG ++ ++G Sbjct: 232 GFIAGQTAPPGRRMGHAGAIISGGQGTAAEKMKALTAAGIHVVQSPAEIGETVARVIGK 290 >gi|171692603|ref|XP_001911226.1| hypothetical protein [Podospora anserina S mat+] gi|170946250|emb|CAP73051.1| unnamed protein product [Podospora anserina S mat+] Length = 332 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 166/297 (55%), Positives = 215/297 (72%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKVL QG TGK GTFH +QAI Y T+VVGG +PKK G +PVF Sbjct: 35 NLRINSDTKVLFQGFTGKQGTFHAQQAIDY-GTKVVGGTNPKKAGQEHLG----LPVFAN 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V++A + T A A+ I+VPP A I E++ AEIPL+VCITEGIP DMVR+ + L+ ++ Sbjct: 90 VSDAVKETGATATAIFVPPPLAAAGIEEAVAAEIPLVVCITEGIPQHDMVRITSILKSQN 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 150 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+M+GEIGGSAEEEAA FLK KP+V Sbjct: 210 VGIGGDPFSGTNFIDCLKVFLEDGETDGIIMIGEIGGSAEEEAADFLKQYNTVNGGKPVV 269 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APPGR MGHAGA+++GGKG A KI A++ AG+ + SPA +G++L + Sbjct: 270 SFIAGISAPPGRRMGHAGAIVAGGKGDANSKIKALEAAGVVVERSPASLGKALRDEF 326 >gi|71892112|ref|YP_277844.1| succinyl-CoA synthetase, alpha chain [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796218|gb|AAZ40969.1| succinyl-CoA synthetase, alpha chain [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 293 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 153/296 (51%), Positives = 208/296 (70%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TK++ QG TGK +FH++QA+ Y T++VGG+ P KG + G +P+F Sbjct: 1 MSILVNKDTKIICQGFTGKHASFHSQQALNY-GTKIVGGVTPGKGGSIHLG----LPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T+A S+IYVP DAI+ESI A I LIVCITEGIP+LDM+ +K +L+K Sbjct: 56 TVGEAINNTSATTSIIYVPAPFCKDAILESIHAGIKLIVCITEGIPILDMLLIKQQLKKH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++ +IGPNCPGI+TP CK+GIMP I G VGI+SRSGTLTYE V QT+ GLGQST Sbjct: 116 NTCMIGPNCPGIITPGQCKLGIMPSDIHNPGCVGIISRSGTLTYEVVKQTTDLGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G++FID+L LF D T +VM+GEIGG +EE+AA+++ KKP++ Sbjct: 176 VGIGGDPILGSDFIDILSLFEQDPQTSLMVMIGEIGGRSEEKAAKYINKYI----KKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++AG TAP G+ MGHAGA+ISG A +K + ++G+ I + IG+ + + Sbjct: 232 AYIAGTTAPKGKRMGHAGAIISGIGSTAHEKYEILSQSGVHIVNNFINIGQFIKSI 287 >gi|330980736|gb|EGH78839.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 294 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 169/299 (56%), Positives = 214/299 (71%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T +N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVDTTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVVLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 V-GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V GGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+ Sbjct: 176 VGIGGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 232 VSYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 290 >gi|195125473|ref|XP_002007202.1| GI12510 [Drosophila mojavensis] gi|193918811|gb|EDW17678.1| GI12510 [Drosophila mojavensis] Length = 328 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 169/300 (56%), Positives = 228/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLTGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+ T +A+VIYVPP GA AI+E+++AEIPLIVCITEG+P DMV+VK L + Sbjct: 86 VAEAKKATDPHATVIYVPPPGAAAAIMEALDAEIPLIVCITEGVPQHDMVKVKHALVSQD 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID L++FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLDVFLKDPETKGIILIGEIGGVAEEKAADYLTEFNTGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 266 SFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGYELFKEMKRL 325 >gi|118580135|ref|YP_901385.1| succinyl-CoA synthetase subunit alpha [Pelobacter propionicus DSM 2379] gi|118502845|gb|ABK99327.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Pelobacter propionicus DSM 2379] Length = 296 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 160/299 (53%), Positives = 211/299 (70%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NT+ +VQG+TG++G FH +Q Y +QVVGG+ P KG + G PVF Sbjct: 1 MSILIDGNTRFVVQGITGRSGLFHAQQCRAY-GSQVVGGVTPGKGGSEIDG----FPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A T A AS+I+VPP A D+I+E+++A + L VCITEGIPV DMV +A LE S Sbjct: 56 TLEQAVRATGATASLIFVPPPAAADSILEAVDAGLELCVCITEGIPVRDMVLARAVLEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPN PG++TP CK+GIMPG I G +G++SRSGTLTYE V Q + GLGQST Sbjct: 116 KTRLVGPNSPGVITPGQCKMGIMPGQIHAPGRIGVISRSGTLTYEIVRQLTDRGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGD + G +F DVL+LF D T+ + MVGEIGG+AEEEAA ++++ KP+ Sbjct: 176 VGIGGDAIIGMKFSDVLKLFNDDPDTDGVFMVGEIGGTAEEEAALWIRENM----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 FVAG +APPG+ MGHAGA+IS GKG A DKI +KE G+ +A SP R+G +++E L Sbjct: 232 AFVAGVSAPPGKRMGHAGAIISAGKGKATDKIRTLKECGVTVADSPIRMGEAMIEALRK 290 >gi|254994742|ref|ZP_05276932.1| succinyl-CoA ligase chain A (sucD) [Anaplasma marginale str. Mississippi] Length = 294 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 186/299 (62%), Positives = 230/299 (76%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNT+V+ QG TG GTFH+EQA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MSVLVDKNTRVICQGFTGSNGTFHSEQAVAY-GTKMVGGVTPGKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +AK T ANASVIYVP A DAI E+IEAEI LIVCITEGIPVLDMV+VK L S Sbjct: 56 TVLQAKVETQANASVIYVPAPYAADAIFEAIEAEIELIVCITEGIPVLDMVQVKRALAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR+IGPNCPGI+TP+ CKIGIMPG I +KG++G++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRMIGPNCPGIITPEECKIGIMPGYIHKKGNIGVVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+D ++LFL DE T IV++GEIGGS EEEA +FL+ G KKP+V Sbjct: 176 IGIGGDPVHGMSFLDCVQLFLEDEDTHGIVIIGEIGGSEEEEAVEFLQ---SSGTKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GFVAG+TAPPG+ MGHAGA+ SG G A+ KI MK AG+ +A +PA IG+++++++G Sbjct: 233 GFVAGQTAPPGKRMGHAGAISSGSSGTAKGKIEFMKRAGVAVAETPAVIGKTVLDVMGK 291 >gi|74316824|ref|YP_314564.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Thiobacillus denitrificans ATCC 25259] gi|74056319|gb|AAZ96759.1| succinyl-CoA ligase, alpha subunit [Thiobacillus denitrificans ATCC 25259] Length = 297 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 173/305 (56%), Positives = 229/305 (75%), Gaps = 15/305 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDK+TKV+ QG TGK G+FH+EQAI Y T++VGG+ P KG +N+PVF Sbjct: 1 MSILVDKDTKVICQGFTGKQGSFHSEQAIAY-GTRMVGGVTPGKGGQTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ 114 TV +A T A A++IYVP + A D+I+E+ +A I +IVCITEGIPVLDM++VK Sbjct: 56 TVRDAVRETGAQATMIYVPAAFAADSILEAADAGIEVIVCITEGIPVLDMLQVKTALNVK 115 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 A L+ + ++LIGPNCPGI+T CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q G Sbjct: 116 AALKANGAKLIGPNCPGIITSGECKIGIMPGVIHQKGRIGIVSRSGTLTYEAVHQTTQLG 175 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 LGQST VGIGGDP+KG +FID LE+F AD TE++++VGEIGGS+EEEAA+++ Sbjct: 176 LGQSTCVGIGGDPIKGLDFIDCLEMFEADPQTEAVILVGEIGGSSEEEAAEYIHTRM--- 232 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KKP+ ++AG+TAP G+ MGHAGA+I+GG G A+ KI A++ AG+ +A SPA +G ++ Sbjct: 233 -KKPVAAYIAGRTAPKGKRMGHAGAIIAGGAGTADAKIRALEAAGVVVAQSPAGLGEAVQ 291 Query: 295 ELLGS 299 LG+ Sbjct: 292 LALGA 296 >gi|66805061|ref|XP_636263.1| succinate-CoA ligase [Dictyostelium discoideum AX4] gi|166202795|sp|P36967|SUCA_DICDI RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; AltName: Full=p36; Flags: Precursor gi|60464615|gb|EAL62749.1| succinate-CoA ligase [Dictyostelium discoideum AX4] Length = 315 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 173/299 (57%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 S+L++K+TKV+ QG TG GTFH++QAI Y T +VGG+ P KG ++++PVF T Sbjct: 21 SVLINKHTKVICQGFTGNQGTFHSKQAIEY-GTNMVGGVSPGKGGQ----KHLDLPVFNT 75 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE T ANA+VIYVPP A AI E+I+AE+ L+VCITEGIP DMV+VK L +++ Sbjct: 76 VKEAKEATGANATVIYVPPPHAAAAIKEAIDAEMELVVCITEGIPQQDMVKVKYLLNKQN 135 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 136 KTRLIGPNCPGIIKPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVAQTTAVGLGQSTC 195 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++F D TE I+++GEIGG AEEEAAQ+L D KP+V Sbjct: 196 IGIGGDPFNGTNFIDCLKMFTQDPQTEGIILIGEIGGEAEEEAAQWLIDN---PTDKPVV 252 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG +APPGR MGHAGA+ISGGKG A KI A+K AG+ + SPA++G ++++ + Sbjct: 253 SFIAGLSAPPGRRMGHAGAIISGGKGDANSKIEALKAAGVTVTFSPAKLGETILQKMNE 311 >gi|303236675|ref|ZP_07323256.1| succinate-CoA ligase, alpha subunit [Prevotella disiens FB035-09AN] gi|302483179|gb|EFL46193.1| succinate-CoA ligase, alpha subunit [Prevotella disiens FB035-09AN] Length = 290 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 141/299 (47%), Positives = 201/299 (67%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+T+++VQG+TG+ G+FH + Y T VVGG P K G +PVF Sbjct: 1 MSILINKDTRLIVQGITGRDGSFHATKMKEY-GTNVVGGTSPGKAGQEVAG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A +T AN SVI+VP + A DA++E+ +A I LI+CITEG+P LD+V ++ Sbjct: 56 TVKDAVAKTNANTSVIFVPAAFAKDAMLEAADAGIKLIICITEGVPTLDVVEAYNYIKIK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++PD +GIMP +IF+KG G++SRSGTLTY+ V + G+GQS+A Sbjct: 116 GANLIGPNCPGLISPDESMVGIMPTNIFKKGHTGVISRSGTLTYQVVASLTAAGMGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDP+ G F ++LE+F D T+SI ++GEIGG AEE AA+++K KP+V Sbjct: 176 IGVGGDPIVGLYFQELLEMFQNDPETDSIALIGEIGGDAEERAAEYIKQYV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F++G+ AP G+ MGHAGA+IS G G A +K+ A + AGI +A I L + LG Sbjct: 232 AFISGREAPKGKQMGHAGAIISSGSGTAAEKVAAFEAAGIPVARETHEIPELLKQKLGK 290 >gi|33519794|ref|NP_878626.1| succinyl-CoA synthetase alpha chain [Candidatus Blochmannia floridanus] gi|33504139|emb|CAD83401.1| succinyl-CoA synthetase alpha chain [Candidatus Blochmannia floridanus] Length = 296 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 159/300 (53%), Positives = 216/300 (72%), Gaps = 10/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+NTKV+ QG TGK +FH+ Q++LY T+++GG+ P KG G +PVF Sbjct: 1 MSILIDQNTKVICQGFTGKKASFHSRQSLLY-GTKILGGVTPGKGGYTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A SVIYVP DAI+E+I+++I LIVCITEG+P+LDM+ +K +L+K Sbjct: 56 TVHEAICHTNATVSVIYVPALFCKDAILEAIDSKIKLIVCITEGMPILDMLIIKNQLKKQ 115 Query: 121 SSRL-IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +S + IGPNCPGI+TP+ CKIGIMPG I G++GI+SRSGTLTYE V Q + GLGQST Sbjct: 116 NSCIMIGPNCPGIITPNQCKIGIMPGYIHNAGNIGIVSRSGTLTYEVVKQITDIGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ G++FID+L LF D TE I+M+GEIGG +E+EAA ++K KPI Sbjct: 176 CVGIGGDPILGSDFIDILRLFEKDPQTELIIMIGEIGGQSEQEAASYIKKYI----TKPI 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V ++AG TAP G+ MGHAGA+ISG GA +K + ++G+ I + A IG+++ ++L + Sbjct: 232 VAYIAGLTAPKGKRMGHAGAIISGKHSGAHEKCTVLSKSGVHIVNNFAYIGKTISKILTN 291 >gi|116327601|ref|YP_797321.1| succinyl-CoA synthetase, alpha subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331788|ref|YP_801506.1| succinyl-CoA synthetase, alpha subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120345|gb|ABJ78388.1| Succinyl-CoA synthetase, alpha subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125477|gb|ABJ76748.1| Succinyl-CoA synthetase, alpha subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 291 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 163/299 (54%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD+NTKV+VQG+TGK G+FH Q + Y T+VV G+ P KG + W VPVF Sbjct: 1 MAVLVDENTKVVVQGITGKEGSFHATQMLAY-GTKVVAGVTPGKGGSKWEDK---VPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ ++ + NA+VI+VPP+ A DAIIE I AE+PL++CITEGIP DM++V + L S Sbjct: 57 TIKDSVKNEGVNAAVIFVPPAFAADAIIEGILAELPLVICITEGIPTHDMLKVYSVLRNS 116 Query: 121 SSRLIGPNCPGILTPDSC-KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPG++TP + K+GIMPG I GSVGI+SRSGTLTYE+V Q +++GLGQST Sbjct: 117 KTRLVGPNCPGVITPRAKQKLGIMPGFIHSPGSVGIVSRSGTLTYESVAQITKQGLGQST 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV G + ++L D T+ IVM+GEIGG++EEEAA+++K+ KKP+ Sbjct: 177 CIGIGGDPVPGMNHTEAIQLLNEDPETKGIVMIGEIGGTSEEEAAEYIKNHV----KKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAPPG+ MGHAGA+ISGG G A K+ AM+EAGI + S A +G + + LG Sbjct: 233 VGFIAGQTAPPGKRMGHAGAIISGGLGTATSKMKAMQEAGIQVCQSIAEVGEKMKKALG 291 >gi|124010173|ref|ZP_01694830.1| succinyl-CoA synthetase alpha chain [Microscilla marina ATCC 23134] gi|123983764|gb|EAY24186.1| succinyl-CoA synthetase alpha chain [Microscilla marina ATCC 23134] Length = 294 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 156/300 (52%), Positives = 212/300 (70%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG G+FH Q I Y + VVGG+ P KG + PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGSFHAGQMIEY-GSNVVGGVTPGKGGMTH----LERPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A+ S+I+VPP+ A DAI+E+ +A I +I+ ITEGIP+LDMV+ K ++ Sbjct: 56 TVKEAVKATGADVSIIFVPPAFASDAIMEAADAGIKVIIAITEGIPILDMVKAKQYIQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP K+GIMPG I G +GI+SRSGTLTYEAV Q ++ GLGQST Sbjct: 116 DVRLVGPNCPGVITPGEAKVGIMPGFIHNPGRIGIVSRSGTLTYEAVDQITKAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT + +EL + D T++I+M+GEIGGS E EAA ++K + G +KP+V Sbjct: 176 IGIGGDPVIGTTTKEAVELLMNDPDTDAIIMIGEIGGSMEAEAANWIKAD---GNRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAP GR MGHAGA+I G AE K+ M+E G+ + SPA IG ++V+ L S+ Sbjct: 233 GFIAGQTAPKGRRMGHAGAIIGGKDDTAEAKMRIMRECGLHVVASPAEIGATMVKALESV 292 >gi|170068274|ref|XP_001868803.1| succinyl-CoA ligase subunit alpha [Culex quinquefasciatus] gi|167864342|gb|EDS27725.1| succinyl-CoA ligase subunit alpha [Culex quinquefasciatus] Length = 304 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 170/301 (56%), Positives = 227/301 (75%), Gaps = 6/301 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M L + V+ QG TGK GTFH++QAI Y T++VGG+ P KG +++PVF Sbjct: 6 MVRLFSRVKLVICQGFTGKQGTFHSQQAIEY-GTKLVGGVSPGKGGKTH----LDLPVFN 60 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EK 119 +V EAK+ TAA+A+VIYVPP GA AI+E+IEAE+PLIVCITEG+P DMV+VK L + Sbjct: 61 SVKEAKQATAADATVIYVPPPGAAKAILEAIEAEMPLIVCITEGVPQHDMVKVKHALLAQ 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ LGQ+ Sbjct: 121 EKSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVNLGQTL 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+ Sbjct: 181 CVGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLMQYNQGIKAKPV 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V F+AG +APPGR MGHAGA+ISGGKGGA+DKINA++++G+ + SPA++G+ L + + Sbjct: 241 VSFIAGLSAPPGRRMGHAGAIISGGKGGAQDKINALEKSGVIVTRSPAQMGKELYKEMKR 300 Query: 300 L 300 L Sbjct: 301 L 301 >gi|30248082|ref|NP_840152.1| succinyl-CoA synthetase subunit alpha [Nitrosomonas europaea ATCC 19718] gi|30179967|emb|CAD83962.1| ATP-citrate lyase/succinyl-CoA ligases:DUF184 [Nitrosomonas europaea ATCC 19718] Length = 291 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 161/299 (53%), Positives = 219/299 (73%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQA--ILYCQTQVVGGIHPKKGSTYWTGGNVNVPV 58 M+IL+D++T+V+ QG+TGK G FHT Q Y + V G++PKK ++PV Sbjct: 1 MAILIDRHTRVMTQGITGKTGQFHTRQCREYAYGRDCFVAGVNPKKAGE----ELESIPV 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV EAK++T A SVIYVPP+ A AI E++EA + L+VCITEGIPV DM+R +AR+ Sbjct: 57 FATVEEAKQKTGATVSVIYVPPAYASAAIDEAVEAGLDLVVCITEGIPVRDMLRTRARMR 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPGI+TP KIGIMPG+I ++G +G++SRSGTLTYEAV Q S+ GLGQS Sbjct: 117 GKKTLLIGPNCPGIITPGELKIGIMPGAIHQQGRIGVVSRSGTLTYEAVAQLSELGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G + IDVL+LF D T++++MVGEIGG+ EEE A+++K+ KKP Sbjct: 177 TCIGIGGDPINGLKHIDVLKLFNEDSETDAVLMVGEIGGTDEEECARWVKEHM----KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGF+AG TAPPG+ MGHAGA+I+GGKG A++KI M+ GI + +PA +G+ L ++ Sbjct: 233 VVGFIAGVTAPPGKRMGHAGAIIAGGKGTAQEKIEVMEACGIRVTRNPAEMGKLLKSVI 291 >gi|85103754|ref|XP_961593.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Neurospora crassa OR74A] gi|74665374|sp|Q9P727|SUCA_NEUCR RecName: Full=Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor gi|7635789|emb|CAB88555.1| probable atp-specific succinyl-coa synthetase alpha subunit [Neurospora crassa] gi|28923140|gb|EAA32357.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Neurospora crassa OR74A] Length = 333 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 168/297 (56%), Positives = 219/297 (73%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKVL QG TGK GTFH +QAI Y T VVGG +PKK ++ PVF+ Sbjct: 36 NLKINGDTKVLFQGFTGKQGTFHAQQAIEY-GTNVVGGTNPKKAGQTH----LDRPVFSN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V+EA + T A A+ I+VPP A I E+++AEIPL VCITEGIP DMVR+ + L+ +S Sbjct: 91 VSEAVKETGATATAIFVPPPLAAAGIEEALQAEIPLAVCITEGIPQHDMVRITSMLKTQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+M+GEIGGSAEEEAA FLK+ + KP+V Sbjct: 211 VGIGGDPFSGTNFIDCLKVFLEDGDTDGIIMIGEIGGSAEEEAADFLKEYNTKNGGKPVV 270 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APPGR MGHAGA+++GGKGGA+ KI A++ AG+ + SPA +G++L + Sbjct: 271 SFIAGISAPPGRRMGHAGAIVAGGKGGADSKIKALEAAGVVVERSPASLGKALRDEF 327 >gi|268575842|ref|XP_002642901.1| Hypothetical protein CBG15175 [Caenorhabditis briggsae] gi|187027361|emb|CAP33573.1| hypothetical protein CBG_15175 [Caenorhabditis briggsae AF16] Length = 321 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 169/297 (56%), Positives = 222/297 (74%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +++++K+TKV+VQG TG+ GTFH++Q + Y T VVGG+ P K G +PVF T Sbjct: 28 NLMINKSTKVIVQGFTGRQGTFHSKQMLEY-NTNVVGGVSPNKAGQTHLG----LPVFGT 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+RT A+A+VIYVP +GA AI E+++AEI LIV ITEGIP DM+RVK RL +++ Sbjct: 83 VAEAKDRTGADATVIYVPAAGAARAIHEAMDAEIGLIVAITEGIPQQDMIRVKNRLLKQN 142 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 143 KSRLLGPNCPGIIASGDCKIGIMPGHIHKKGCIGIVSRSGTLTYEAVHQTTAVGLGQTRC 202 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D T+ I+++GEIGG AEE+AA+FLK KP+V Sbjct: 203 IGIGGDPFNGTNFIDCLEVFLEDNETKGIILIGEIGGQAEEQAAEFLKSRNSGPNAKPVV 262 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+I+GGKG A DKI A++ A + + SPA++G ++ + + Sbjct: 263 SFIAGVTAPPGRRMGHAGAIIAGGKGTAGDKIEALRNANVVVTDSPAKLGIAMQQAM 319 >gi|240274070|gb|EER37588.1| conserved hypothetical protein [Ajellomyces capsulatus H143] gi|325095548|gb|EGC48858.1| succinyl-CoA ligase alpha-chain [Ajellomyces capsulatus H88] Length = 331 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 172/294 (58%), Positives = 222/294 (75%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T VVGG +PKK G PVF T Sbjct: 36 NLRINSDTKVIYQGFTGKQGTFHAQQAIDY-GTNVVGGTNPKKAGQTHLGK----PVFAT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A +I E+IE+E+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 91 VRDAVKETGATASAIFVPPPLAAKSIEEAIESEVPLVVCITEGIPQHDMVRITDILKTQN 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLK E K + KP V Sbjct: 211 VGIGGDPFSGTNFIDCLKVFLNDEETDGIIMIGEIGGSAEEDAAEFLKQENK--KNKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L+ Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALETAGVIVERSPAALGKTLL 322 >gi|307721037|ref|YP_003892177.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Sulfurimonas autotrophica DSM 16294] gi|306979130|gb|ADN09165.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Sulfurimonas autotrophica DSM 16294] Length = 291 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 156/299 (52%), Positives = 212/299 (70%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+VQG TGK GTFH EQ I Y T++VGG+ P KG G PVF Sbjct: 1 MSILVNKDTKVIVQGFTGKEGTFHAEQCIDY-GTKIVGGVTPNKGGETHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A S+++VPP+ DA++E+ +A I L V ITEG PV DM+ K K Sbjct: 56 TVKDAVDATGATVSMVFVPPAFVADAVMEAADAGIELAVIITEGAPVKDMMYAKQYATKH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + + IGPNCPGI+T D CKIGIMPG IF+KG+VG++S+SGTLTYE Q +EG G +TA Sbjct: 116 NMKTIGPNCPGIITADECKIGIMPGMIFKKGNVGLISKSGTLTYEGANQVVKEGFGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + +L +F AD TE+IVM+GEIGG E +AA+ +K++ KP+V Sbjct: 176 VGIGGDPIIGLSYKQILPMFEADPETEAIVMIGEIGGDLEIQAAKLIKEQI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP G+ MGHAGA+ISG G A++K++A++ AG+ + SPA IG+++ E+L + Sbjct: 232 AFIAGQTAPKGKRMGHAGAIISGSAGTAKEKMDALEAAGVKVVVSPAEIGKAVAEVLAA 290 >gi|46110296|ref|XP_382206.1| hypothetical protein FG02030.1 [Gibberella zeae PH-1] Length = 329 Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats. Identities = 167/293 (56%), Positives = 217/293 (74%), Gaps = 6/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH EQAI Y T+VVGG +PKK G +PVF Sbjct: 32 NLRINSDTKVIYQGFTGKQGTFHAEQAIEY-GTKVVGGTNPKKAGQTHLG----LPVFKN 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V+EA + T A A+ ++VPP A I E++EAEIPL+VCITEGIP DMVR+ L+ + Sbjct: 87 VSEAVKATGATATGLFVPPPLAAAGIEEALEAEIPLVVCITEGIPQHDMVRITDMLKTQD 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 147 KTRLVGPNCPGIIAPEQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++F D T+ I+M+GEIGGSAEE+AA+FLK KP+V Sbjct: 207 VGIGGDPFSGTNFIDCLKVFTEDPNTDGIIMIGEIGGSAEEDAAEFLKQANTVNGGKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG +APPGR MGHAGA++SGGKGGA+ KI A+++AG+ + SPA +G++L Sbjct: 267 SFIAGISAPPGRRMGHAGAIVSGGKGGADTKIKALEDAGVIVERSPAGLGKAL 319 >gi|320161459|ref|YP_004174683.1| succinyl-CoA synthetase alpha chain [Anaerolinea thermophila UNI-1] gi|319995312|dbj|BAJ64083.1| succinyl-CoA synthetase alpha chain [Anaerolinea thermophila UNI-1] Length = 287 Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats. Identities = 154/293 (52%), Positives = 206/293 (70%), Gaps = 7/293 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K T+++VQG+TG G FHT Q + Y T VV G+ P KG + +PVF Sbjct: 1 MSILVNKQTRLVVQGITGNEGLFHTTQMVAY-GTNVVAGVTPGKGGEWVL--EGKIPVFD 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A E T AN SVI+VP A DAI+E+ +A + LIVCITEGIPV DM+RV++ L++ Sbjct: 58 TVRSAVETTGANTSVIFVPARFAPDAILEAADAGVSLIVCITEGIPVQDMMRVRSYLDQK 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPGILTP K+GI+P +I G++GI+SRSGTLTYE ++ G G ST Sbjct: 118 KVRLVGPNCPGILTPGEAKVGIIPNNISIPGNIGIVSRSGTLTYEVLYALKMAGKGASTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F+DVL++F AD T+ +VM+GEIGG+ EE+AA+F+ R KP+V Sbjct: 178 VGIGGDPINGTNFVDVLDMFEADPHTDQVVMIGEIGGTDEEKAAEFI----ARNMTKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG++APPG+ MGHAGA+I GG G A DK+ A++++G+ +A P I L Sbjct: 234 AFIAGQSAPPGKRMGHAGAIIEGGTGTARDKVLALEKSGVRVANHPEEIPGLL 286 >gi|320588196|gb|EFX00671.1| succinyl-synthetase alpha [Grosmannia clavigera kw1407] Length = 331 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 174/297 (58%), Positives = 222/297 (74%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKVL QG TGK GTFH +QA+ Y T+VVGG +PKK T G +PVF T Sbjct: 34 NLRINSDTKVLYQGFTGKQGTFHAQQALDY-GTKVVGGTNPKKAGTTHLG----LPVFGT 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V+EA ++T A A+ I+VPP A I E+I AEIPLIVCITEGIP DM+R+ L+ +S Sbjct: 89 VSEAVKQTGATATAIFVPPPVAASGIEEAIAAEIPLIVCITEGIPQHDMLRITNILKTQS 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 149 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FLADE TE I+M+GEIGGSAEE+AA+FL KP+V Sbjct: 209 VGIGGDPFSGTNFIDCLKVFLADEETEGIIMIGEIGGSAEEDAAEFLLANNTVNGGKPVV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + PSPA +G++L + Sbjct: 269 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKIRALEAAGVVVEPSPAGLGKALRDEF 325 >gi|326335682|ref|ZP_08201868.1| succinyl-CoA synthetase subunit alpha [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692111|gb|EGD34064.1| succinyl-CoA synthetase subunit alpha [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 347 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 162/299 (54%), Positives = 213/299 (71%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K+LVQG TG GTFH EQ I Y T VVGG+ P KG G PVF Sbjct: 57 MSVLVNKNSKILVQGFTGSEGTFHAEQMIQY-GTNVVGGVTPNKGGQTHLGK----PVFN 111 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V +A + A+ S+I+VPP+ A DAI+E+ EA I +I+ ITEGIPV DMV+V A ++ Sbjct: 112 SVKDAVTKVGADTSIIFVPPAFAADAIMEAAEAGIKVIITITEGIPVADMVKVAAYIKDK 171 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP+ K+GIMPG +F+KG VGI+S+SGTLTYEA Q ++GLG STA Sbjct: 172 DCRLIGPNCPGVITPEEAKVGIMPGFVFKKGEVGIVSKSGTLTYEAADQVVRQGLGISTA 231 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +ELF+ D TE IVM+GEIGG E EAA+++K+ G +KP+V Sbjct: 232 IGIGGDPIIGTTTKEAIELFMNDPETEIIVMIGEIGGQLEVEAARWIKE---TGNRKPVV 288 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAP GRTMGHAGA++ G + AE K M+E GI + SPA+IG + E+ Sbjct: 289 GFIAGETAPKGRTMGHAGAIVGGSEDTAEAKKRIMRECGIHVVDSPAKIGEKVKEVFRK 347 >gi|291612997|ref|YP_003523154.1| succinyl-CoA synthetase, subunit alpha [Sideroxydans lithotrophicus ES-1] gi|291583109|gb|ADE10767.1| succinyl-CoA synthetase, alpha subunit [Sideroxydans lithotrophicus ES-1] Length = 293 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 163/300 (54%), Positives = 218/300 (72%), Gaps = 10/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G +PV Sbjct: 1 MSILINKDTKVITQGMTGKVGQFHTFHCKQYANGANCFVAGVNPKKVGEQFEG----IPV 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TV +AKE T A SVIYVPPSGA AI E++EAE+ L++CITEGIPV DM++ + +++ Sbjct: 57 YATVRDAKEATGATVSVIYVPPSGAAAAIDEAVEAELDLVICITEGIPVHDMLKTRYKMQ 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q + G GQS Sbjct: 117 GKRTLLIGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLTALGYGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + VGIGGDP+ G + IDV++LF D T++++MVGEIGGS EEE A+++K KKP Sbjct: 177 SCVGIGGDPINGLKHIDVMKLFNDDPETDAVIMVGEIGGSDEEECARWIK----GNMKKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VGF+AG TAP G+ MGHAGA+ISGG+GGA DK+ M+E GI I +PA +GR++ ++L Sbjct: 233 VVGFIAGVTAPEGKRMGHAGAIISGGQGGANDKLAVMEECGIQITRNPAEMGRTMQKVLK 292 >gi|328866700|gb|EGG15083.1| succinate-CoA ligase [Dictyostelium fasciculatum] Length = 320 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 178/299 (59%), Positives = 229/299 (76%), Gaps = 9/299 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ++V+K+TKV+ QG TGK GTFH++QAI Y TQ+VGG+ P KG + ++++PVF +V Sbjct: 27 VMVNKDTKVICQGFTGKQGTFHSQQAIDY-GTQMVGGVSPGKGGS----KHLDLPVFNSV 81 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAK+ T ANASVIYVPP A AIIE+IEAE+ L+VCITEGIP DMVRVK L ++ Sbjct: 82 KEAKKATDANASVIYVPPPYAAQAIIEAIEAEMELVVCITEGIPQQDMVRVKYLLNRQNK 141 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQST V Sbjct: 142 TRLIGPNCPGIIKPGECKIGIMPGHIHRPGKIGIVSRSGTLTYEAVAQTTAVGLGQSTCV 201 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D L+LF D TE I+++GEIGG AEEEAA +LK+ KP+V Sbjct: 202 GIGGDPFNGTNFVDCLKLFTKDPQTEGIILIGEIGGEAEEEAALWLKEN---PTDKPVVS 258 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPGR MGHAGA+ISGGKGGA+ K+ A+++AG+ ++ SPA++G +++E + + Sbjct: 259 FIAGLTAPPGRRMGHAGAIISGGKGGADSKMKALQDAGVIMSLSPAKLGVTMLEAMKKI 317 >gi|255648287|gb|ACU24596.1| unknown [Glycine max] Length = 324 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 184/298 (61%), Positives = 229/298 (76%), Gaps = 9/298 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK+T+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF T Sbjct: 29 AVFVDKSTRVICQGITGKNGTFHTEQAIEY-GTNMVGGVTPKKGGTEHLG----LPVFNT 83 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMVRVKA L +S Sbjct: 84 VAEAKAETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQS 143 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 144 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTC 203 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D L+ FL D TE I+++GEIGG+AEE+AA +KD G +KP+V Sbjct: 204 VGIGGDPFNGTNFVDCLQKFLTDPQTEGIILIGEIGGTAEEDAAALIKD---SGTEKPVV 260 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA++SGGKG A+DKI ++EAG+ + SPA+IG +++++ Sbjct: 261 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVMVVESPAKIGAAMLDVFK 318 >gi|294935591|ref|XP_002781462.1| Succinyl-CoA ligase, putative [Perkinsus marinus ATCC 50983] gi|239892158|gb|EER13257.1| Succinyl-CoA ligase, putative [Perkinsus marinus ATCC 50983] Length = 334 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 183/298 (61%), Positives = 227/298 (76%), Gaps = 5/298 (1%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QGLTGK GTFHT QAI Y T++VGG++PKK T G ++P+F V Sbjct: 32 VWVDKNTKVICQGLTGKQGTFHTAQAIEY-GTKMVGGVNPKKAGTTHHVGGKDLPIFANV 90 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 EA+E T A+ASVIYVPPSGA A +E+IEAEIPL+VCITEGIP DMV+VKA L+ + Sbjct: 91 MEAREATGADASVIYVPPSGAASACLEAIEAEIPLVVCITEGIPQHDMVKVKAALKMAGG 150 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P+ CKIGIMPG I +KG +G++SRSGTLTYEAV QT++ GLGQST Sbjct: 151 RTRLIGPNCPGIIKPEECKIGIMPGYIHKKGKIGVVSRSGTLTYEAVNQTTEVGLGQSTV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID LE F+ D TE I+++GEIGG+AEEEAA++LK+ K KP+V Sbjct: 211 VGIGGDPFNGTNFIDCLERFVQDPQTEGIILIGEIGGAAEEEAAEWLKEHNK--NNKPVV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA+ISGGKG A KI A++ G + SPA +G ++E+ Sbjct: 269 SFIAGVTAPPGRRMGHAGAIISGGKGTAATKIAALEGCGASVVRSPADLGVRMLEMYK 326 >gi|307566441|ref|ZP_07628876.1| succinyl-CoA synthetase, alpha subunit [Prevotella amnii CRIS 21A-A] gi|307344866|gb|EFN90268.1| succinyl-CoA synthetase, alpha subunit [Prevotella amnii CRIS 21A-A] Length = 289 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 144/297 (48%), Positives = 202/297 (68%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNT+++VQG+TG+ G+FH + Y T VVGG P KG ++PVF Sbjct: 1 MSILINKNTRLIVQGITGRDGSFHATKMKEY-GTNVVGGTSPGKGGQNVN----DIPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T AN S+I+VP + A DA+ E+I+ I L+VCITEG+P LD V + + Sbjct: 56 TVKEAVKATRANTSIIFVPAAFAKDAMFEAIDGGIELVVCITEGVPTLDAVAAQRYAKLR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPG+++PD +GIMP +IF+KG G++SRSGTLTYE V+ +QEGLG S+A Sbjct: 116 GVKVIGPNCPGLISPDESMVGIMPTNIFKKGHTGVISRSGTLTYEVVYNLTQEGLGLSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDPV G F D+L++F D T+SI ++GEIGG AEE AA+F+K+ KP+ Sbjct: 176 IGVGGDPVVGLYFEDLLQMFQDDPETDSIALIGEIGGDAEERAAKFIKEHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F++G+ APPG+ MGHAGA+IS G G A++KI A + G+ +A I L + L Sbjct: 232 VFISGQQAPPGKQMGHAGAIISSGSGTAKEKIAAFEAVGVPVAKETKEIPILLKKQL 288 >gi|313672319|ref|YP_004050430.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Calditerrivibrio nitroreducens DSM 19672] gi|312939075|gb|ADR18267.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Calditerrivibrio nitroreducens DSM 19672] Length = 290 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 158/299 (52%), Positives = 212/299 (70%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K TKV+VQG TGK G+FH +Q + Y T +VGG+ P KG T G PVF Sbjct: 1 MSILVNKYTKVIVQGFTGKEGSFHAQQCMEY-GTNIVGGVTPGKGGTDHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A S+I+VPP+ GDAI+E+ +A I L V ITEG PV D++ KA K Sbjct: 56 TVEEAVKSTGAEVSIIFVPPAFLGDAIMEAADAGIKLAVAITEGAPVRDIMVAKAYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPGI+T + CKIGIMPG IF+KG+VG++S+SGTLTYEA Q + G G +TA Sbjct: 116 GMMMIGPNCPGIITAEECKIGIMPGFIFKKGNVGLISKSGTLTYEASNQIVKAGYGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L +F AD T++IVM+GEIGG+ E EAA+ +K+ KP+V Sbjct: 176 VGIGGDPIIGLSYKELLPMFEADPETKAIVMIGEIGGTLEIEAAELIKE----KITKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP G+ MGHAGA+I+GGKG A++K++A+ AG + SPA IG ++ ++LG Sbjct: 232 AFIAGQTAPKGKRMGHAGAIIAGGKGTAKEKMDALTAAGAHVVVSPADIGTTVAKVLGK 290 >gi|91203545|emb|CAJ71198.1| strongly similar to succinyl-CoA synthetase alpha chain [Candidatus Kuenenia stuttgartiensis] Length = 291 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 166/297 (55%), Positives = 225/297 (75%), Gaps = 9/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 +L++K TKV+ QG+TG+AG+FH Q + Y T++V G+ P KG T G +PVF ++ Sbjct: 1 MLINKETKVVCQGITGQAGSFHAMQMLEY-GTKLVAGVTPGKGGTIHNG----IPVFGSM 55 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA +T ANASVIYVP S A DAI+E+++AEI L+VCITEGIP LDM+RV L S Sbjct: 56 LEAVNKTGANASVIYVPASFAADAIMEAVDAEIALVVCITEGIPTLDMLRVVKYLAAGKS 115 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPNCPGI+TPD+CKIGIMPG I +KGSVG++SRSGTLTYE V+Q +Q+G+GQST G Sbjct: 116 RLIGPNCPGIITPDACKIGIMPGYIHKKGSVGVVSRSGTLTYEIVWQLTQQGIGQSTCAG 175 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP+ GT F+D+L++F DE T +IV++GEIGGS EEEAA+++K E KP++GF Sbjct: 176 IGGDPIIGTHFVDILKMFQHDEETSAIVLIGEIGGSMEEEAAEYIKKEI----TKPVIGF 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 +AG++AP G+ MGHAGA+I+G KG A K+ A+++AG + +PA IG ++ ++L Sbjct: 232 IAGRSAPHGKRMGHAGAIIAGDKGKAVTKVAALQDAGAFMVDNPADIGITVSKILKD 288 >gi|148266010|ref|YP_001232716.1| succinyl-CoA synthetase, alpha subunit [Geobacter uraniireducens Rf4] gi|146399510|gb|ABQ28143.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Geobacter uraniireducens Rf4] Length = 297 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 163/299 (54%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K++K++VQG+TG++G FHT+Q Y +++V G+ P KG + G +PVF Sbjct: 1 MSILLNKDSKIVVQGITGRSGLFHTQQCRDY-GSKIVAGVTPGKGGIHIEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A+ S+I+VPP GA DAI+E+ +A I L VCITEGIPV DMV + LE Sbjct: 56 TVDEAVHYTNADVSMIFVPPPGAADAILEAADAGIELAVCITEGIPVRDMVLARRVLEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP CK+GIMPG I +KG +G++SRSGTLTYEAV Q + GLGQST Sbjct: 116 KMRLVGPNCPGVITPGECKVGIMPGHIHKKGKIGVVSRSGTLTYEAVKQLTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G +FIDVL+LF D TE++ M+GEIGG AEEEAA ++K+ KKP+ Sbjct: 176 VGIGGDPIIGLKFIDVLKLFNEDPQTEAVFMIGEIGGGAEEEAAYWIKENM----KKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPG+ MGHAGA+I+GGKG AEDKI ++E G+ ++ SP ++G ++ ++G Sbjct: 232 AFIAGVTAPPGKRMGHAGAIITGGKGKAEDKIKTLQECGVAVSTSPTKMGETMQSVMGK 290 >gi|11499134|ref|NP_070368.1| succinyl-CoA synthetase, alpha subunit (sucD-1) [Archaeoglobus fulgidus DSM 4304] gi|6647839|sp|O28733|SUCD1_ARCFU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha 1; AltName: Full=Succinyl-CoA synthetase subunit alpha 1; Short=SCS-alpha 1 gi|2649022|gb|AAB89707.1| succinyl-CoA synthetase, alpha subunit (sucD-1) [Archaeoglobus fulgidus DSM 4304] Length = 291 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 138/297 (46%), Positives = 208/297 (70%), Gaps = 10/297 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +ILVD+NT+V+VQG+TG G+F ++ + Y T+VVGG+ P KG + G +PV+ T Sbjct: 5 AILVDENTRVIVQGITGFQGSFQAKRMLDY-GTKVVGGVTPGKGGSEVHG----IPVYNT 59 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA T A+ S+IYVP A DAI E+ +A + L+VC+TEGIP+ D + + +L + Sbjct: 60 VEEAVAETNADTSIIYVPARFATDAIFEAFDAGLRLVVCVTEGIPLYDEMLIHRKLREVK 119 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 S L+GPNCPG+++P K+G++P F +G++G++SRSGTLTY+ ++ G+GQST V Sbjct: 120 SMLLGPNCPGVISPGRSKVGLLPDRSFTQGNLGVVSRSGTLTYQICENLTKAGIGQSTVV 179 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G F+DVL++F DE T+++++VGEIGG+AEE+AA+F+K KP+V Sbjct: 180 GIGGDPMPGLTFVDVLKMFEEDEETKAVLLVGEIGGTAEEKAAEFIKQ-----MSKPVVA 234 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG+TAPPG+ MGHAGA+I G G AE K+ A+++AG +A + + + + +L Sbjct: 235 FIAGRTAPPGKRMGHAGAIIEGSTGTAEAKMAALRDAGARVAETLLDVVKEVRRVLE 291 >gi|327399555|ref|YP_004340424.1| succinyl-CoA synthetase subunit alpha [Hippea maritima DSM 10411] gi|327182184|gb|AEA34365.1| succinyl-CoA synthetase, alpha subunit [Hippea maritima DSM 10411] Length = 295 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 159/299 (53%), Positives = 210/299 (70%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++ V + ++VLVQG+TGK G++H A T++V G+ P KG ++PVF Sbjct: 1 MAVCVYRTSRVLVQGITGKEGSYHA-LACKDYGTKIVAGVTPGKGGQKVG----DIPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T N S+I+VPP A DAI+E++ + I IVCITEGIPVLDMV+VK +EK Sbjct: 56 TVEEAVKETHPNVSLIFVPPPFAADAILEAVGSGIKTIVCITEGIPVLDMVKVKRVIEKE 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPGI+TP + KIGIMPG IF +GSVGI+SRSGTL YE Q ++ GLGQST Sbjct: 116 GVTLIGPNCPGIITPGATKIGIMPGHIFTRGSVGIISRSGTLLYETADQITRAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT++I L+ F D TE+++MVGEIGG+AEE+AA+F+ AK G KKP+ Sbjct: 176 VGIGGDPIVGTDYIFWLKKFEEDPETEAVMMVGEIGGNAEEKAAEFI---AKGGIKKPVF 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAPPGR MGHAGA+I G G AE K A+++AG+ +P IG + ++L Sbjct: 233 AFIAGRTAPPGRRMGHAGAIIMGKSGTAESKYEALRKAGVHTIENPGYIGEMIAKVLKE 291 >gi|30088685|gb|AAP13544.1| succinyl-CoA synthetase alpha subunit [Neocallimastix frontalis] Length = 330 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 168/298 (56%), Positives = 222/298 (74%), Gaps = 7/298 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L++KNTKV+ QG TGK GTFH + A+ Y T++VGG+ PKK T G +PV+ + Sbjct: 32 NLLINKNTKVITQGFTGKQGTFHAKNALAY-GTKMVGGVSPKKAGTTHLG----LPVYKS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A ASVIYVPP GA AI+E+IEAE+PL+VCITEGIP DMV+V L +S Sbjct: 87 VQDACNALHPEASVIYVPPPGAASAILEAIEAEVPLVVCITEGIPQQDMVKVVDALNSQS 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ + CKIGIMPG I KG +GI+SRSGTLTYEAV QT++ GLGQ+ Sbjct: 147 KTRLVGPNCPGVIKAEECKIGIMPGHIHTKGRIGIVSRSGTLTYEAVNQTTKAGLGQTLV 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKPI 239 GIGGDP GT FID L++FL DE+T+ I+++GEIGGSAEEEA++FLK R KP+ Sbjct: 207 YGIGGDPFNGTNFIDALKIFLNDESTDGIILIGEIGGSAEEEASEFLKQYNLTRKVPKPV 266 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V F+AG+TAPPGR MGHAGA+++GGKGGA+DK+ A++ AG+ ++ SPA++G L Sbjct: 267 VSFIAGRTAPPGRRMGHAGAIVAGGKGGADDKVKALRSAGVVVSASPAQMGEKLKATF 324 >gi|190575605|ref|YP_001973450.1| succinyl-CoA synthetase subunit alpha [Stenotrophomonas maltophilia K279a] gi|190013527|emb|CAQ47162.1| putative succinyl-CoA synthetase alpha chain [Stenotrophomonas maltophilia K279a] Length = 291 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 175/298 (58%), Positives = 219/298 (73%), Gaps = 11/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q I Y TQVVGG+ P KG T +++PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMIEY-GTQVVGGVTPGKGGTTH----IDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T ANASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVQSTGANASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HPDTVLIGPNCPGVITPGECKIGIMPGHIHQPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K+ KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKNHV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ +L Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVVTVRSPGDLGAAIAKL 289 >gi|32469355|gb|AAP83350.1| succinyl-CoA synthetase, alpha subunit [Neocallimastix patriciarum] Length = 339 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 168/298 (56%), Positives = 222/298 (74%), Gaps = 7/298 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L++KNTKV+ QG TGK GTFH + A+ Y T++VGG+ PKK T G +PV+ + Sbjct: 41 NLLINKNTKVITQGFTGKQGTFHAKNALAY-GTKMVGGVSPKKAGTTHLG----LPVYKS 95 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A ASVIYVPP GA AI+E+IEAE+PL+VCITEGIP DMV+V L +S Sbjct: 96 VQDACNALHPEASVIYVPPPGAASAILEAIEAEVPLVVCITEGIPQQDMVKVVDALNSQS 155 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ + CKIGIMPG I KG +GI+SRSGTLTYEAV QT++ GLGQ+ Sbjct: 156 KTRLVGPNCPGVIKAEECKIGIMPGHIHTKGRIGIVSRSGTLTYEAVNQTTKAGLGQTLV 215 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKPI 239 GIGGDP GT FID L++FL DE+T+ I+++GEIGGSAEEEA++FLK R KP+ Sbjct: 216 YGIGGDPFNGTNFIDALKIFLNDESTDGIILIGEIGGSAEEEASEFLKQYNLTRKVPKPV 275 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V F+AG+TAPPGR MGHAGA+++GGKGGA+DK+ A++ AG+ ++ SPA++G L Sbjct: 276 VSFIAGRTAPPGRRMGHAGAIVAGGKGGADDKVKALRSAGVVVSASPAQMGEKLKATF 333 >gi|324512857|gb|ADY45309.1| Succinyl-CoA ligase [GDP-forming] subunit alpha [Ascaris suum] Length = 325 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 167/295 (56%), Positives = 219/295 (74%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++++ NTKV++QGLTGK GTFH ++ I Y T VVGG+ P K T G PVF + Sbjct: 21 NLMIGSNTKVIIQGLTGKEGTFHGKKMIEY-NTNVVGGVSPNKAGTKHLGR----PVFGS 75 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V +A+E+T A+ASVI+VP + A AI E+I+AEIPL+VCITEGIP M+ +K +L + Sbjct: 76 VKDAREKTGADASVIFVPAAFAASAIEEAIDAEIPLVVCITEGIPQHQMIHIKKKLLNQD 135 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P+ CKIGIMPG+I +KG VGI+SRSGTLTYEAV Q+S GLGQ+ Sbjct: 136 KTRLLGPNCPGIIKPEECKIGIMPGNIHQKGVVGIVSRSGTLTYEAVQQSSNVGLGQTLC 195 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT F+D L +FL D T I+++GEIGG EEEAA+FLK+ + KP+V Sbjct: 196 IGIGGDPFNGTNFVDALHVFLNDPNTHGIILIGEIGGEDEEEAAKFLKEYNCGEQSKPVV 255 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG+TAPPGR MGHAGA+ISGGKG A KI A+KEAG+ ++ SPA++G + E Sbjct: 256 SFIAGQTAPPGRRMGHAGAIISGGKGTANGKIEALKEAGVIVSKSPAQMGELIAE 310 >gi|121999018|ref|YP_001003805.1| succinyl-CoA synthetase subunit alpha [Halorhodospira halophila SL1] gi|121590423|gb|ABM63003.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Halorhodospira halophila SL1] Length = 290 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 209/298 (70%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD++T+VLVQG TGK GTFH EQAI Y V G G +++ P+F Sbjct: 1 MSILVDQSTRVLVQGFTGKQGTFHAEQAIAYGTQVVGGV-----TPGRGGGTHLDRPLFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A+ASVIYVP A DAI+E+ +A I +I CITEGIPVLDM+ VK L Sbjct: 56 TVREAVAATGADASVIYVPAPFAADAILEAADAGIRVIACITEGIPVLDMLHVKEALRGE 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TPD+CKIGIMPG I G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 DVALIGPNCPGVITPDACKIGIMPGHIHLPGRIGIVSRSGTLTYEAVKQTTDIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP++G F+D LE F AD T+ +VMVGEIGGSAEEEAA F++D KP+V Sbjct: 176 VGIGGDPIQGMSFVDCLEQFEADPHTDGVVMVGEIGGSAEEEAATFIRDHMS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAPPG+ MGHAGA+ISGGKG A+DK A++ AG+ SP IG + L+ Sbjct: 232 AYIAGVTAPPGKRMGHAGAIISGGKGTADDKFAALEAAGVATVRSPTEIGERIRRLVA 289 >gi|226313081|ref|YP_002772975.1| succinyl-CoA synthetase alpha chain [Brevibacillus brevis NBRC 100599] gi|226096029|dbj|BAH44471.1| succinyl-CoA synthetase alpha chain [Brevibacillus brevis NBRC 100599] Length = 300 Score = 301 bits (770), Expect = 9e-80, Method: Composition-based stats. Identities = 182/299 (60%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+ QG+TG G FHT A+ Y TQ+VGG+ P KG T G +P+F Sbjct: 1 MSILVNKNTKVITQGITGATGLFHTRGAVEY-GTQMVGGVTPGKGGTEVDG----IPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYV P A DAI+E+++AE+ L++CITEGIPVLDMV+VK +E Sbjct: 56 TVKEAVEATGATASVIYVAPPFAADAIMEAVDAELDLVICITEGIPVLDMVKVKRYMEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QTS GLGQSTA Sbjct: 116 KTLLVGPNCPGVITPGECKIGIMPGYIHVPGKVGIVSRSGTLTYEAVHQTSTRGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKG EFIDVL++F D TE+++M+GEIGG+AEEEA + KKP+V Sbjct: 176 VGIGGDPVKGMEFIDVLKMFNEDPDTEAVIMLGEIGGTAEEEA----AEWIAANMKKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G+TAP G+ MGHAGA+ISGGKG A +KI ++E GI +A +PA IG +LVELL Sbjct: 232 GFIGGQTAPEGKRMGHAGAIISGGKGTAAEKIAKLEECGIRVAKTPAVIGETLVELLKE 290 >gi|315607960|ref|ZP_07882953.1| succinyl-CoA synthetase subunit alpha [Prevotella buccae ATCC 33574] gi|315250429|gb|EFU30425.1| succinyl-CoA synthetase subunit alpha [Prevotella buccae ATCC 33574] Length = 290 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 147/299 (49%), Positives = 200/299 (66%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNT+++VQG+TG+ G+FH + Y T VVGG P K +G +PVF Sbjct: 1 MSILINKNTRLIVQGITGRDGSFHATKMKEY-GTNVVGGTSPGKAGQEVSG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E T AN SVI+VP A DA++E+ +A I LI+CITEG+P LD+V+ + + Sbjct: 56 TVRDAVEATQANTSVIFVPAPFAKDAMMEAADAGINLIICITEGVPTLDVVQAYNYIRQK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P+ GIMP IF+KG G++SRSGTLTYE V+ +Q GLGQSTA Sbjct: 116 GANLIGPNCPGLISPEESMAGIMPTGIFKKGRTGVISRSGTLTYEVVYNLTQSGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ G F D+LE+F D T+SI ++GEIGG AEE AA ++K KP+V Sbjct: 176 VGVGGDPIVGLYFQDLLEMFEKDAETDSIAIIGEIGGDAEERAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F++G+ AP G+ MGHAGA+IS G G A++K+ A + GI +A A I L L Sbjct: 232 AFISGREAPKGKQMGHAGAIISSGSGTAKEKVAAFEAVGIPVARETAEIPALLKARLEK 290 >gi|302898208|ref|XP_003047801.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256728732|gb|EEU42088.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 329 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 165/293 (56%), Positives = 220/293 (75%), Gaps = 6/293 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T+VVGG +PKK T +++PVF Sbjct: 32 NLRINGDTKVIYQGFTGKQGTFHAQQAIEY-GTKVVGGTNPKKAGTTH----LDLPVFKN 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V++A + T A A+ ++VPP A I E++EAEIPL+VCITEGIP DMVR+ L+ ++ Sbjct: 87 VSDAVKATGATATALFVPPPVAAAGIEEALEAEIPLVVCITEGIPQHDMVRITDMLKSQN 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 147 KTRLVGPNCPGIIAPEQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++F D T+ I+M+GEIGGSAEE+AA+FLK KP+V Sbjct: 207 VGIGGDPFSGTNFIDCLKVFTEDPDTDGIIMIGEIGGSAEEDAAEFLKQANTVQGGKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+AG +APPGR MGHAGA++SGGKGGA+ KI A+++AG+ + SPA +G++L Sbjct: 267 SFIAGISAPPGRRMGHAGAIVSGGKGGADTKIKALEDAGVIVERSPAGLGKAL 319 >gi|319786170|ref|YP_004145645.1| succinyl-CoA synthetase, subunit alpha [Pseudoxanthomonas suwonensis 11-1] gi|317464682|gb|ADV26414.1| succinyl-CoA synthetase, alpha subunit [Pseudoxanthomonas suwonensis 11-1] Length = 291 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 216/298 (72%), Gaps = 11/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q I Y TQVVGG+ P KG T + +PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMIEY-GTQVVGGVTPGKGGTTH----LELPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L ++ Sbjct: 56 TVAEAVQSTGADASVIYVPPPFAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRT 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + L+GPNCPGI+TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 YPETVLVGPNCPGIITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++ KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIAKHV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ EL Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAEL 289 >gi|313682584|ref|YP_004060322.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Sulfuricurvum kujiense DSM 16994] gi|313155444|gb|ADR34122.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Sulfuricurvum kujiense DSM 16994] Length = 291 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 156/299 (52%), Positives = 208/299 (69%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K++KV+VQG TGK GTFH EQ I Y T++VGG+ P KG G PVF Sbjct: 1 MSILVNKDSKVIVQGFTGKEGTFHAEQCIAY-GTKIVGGVTPGKGGQEHLGQ----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A S+I+VPP+ DA++E+ +A I L V ITEG PV DM+ KA K Sbjct: 56 TVEEAVRSTGATVSMIFVPPAFVSDAVMEAADAGIELAVIITEGAPVKDMMYAKAYAVKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + IGPNCPGI+T D CKIGIMPG IF+KG++G++S+SGTLTYE+ Q +EG G +TA Sbjct: 116 NMMTIGPNCPGIITADECKIGIMPGFIFKKGNIGLISKSGTLTYESANQVVKEGFGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + +L +F AD T +IVM+GEIGG E +AA ++K+ KP+V Sbjct: 176 VGIGGDPIIGLSYKQLLPMFEADPETHAIVMIGEIGGDLEIQAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP G+ MGHAGA+ISGG G A +K+ A++ AG+ + SPA IG+++ E++ Sbjct: 232 AFIAGQTAPAGKRMGHAGAIISGGSGTAAEKMAALEAAGVKVVVSPADIGKAVAEVMAK 290 >gi|255546904|ref|XP_002514510.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial precursor, putative [Ricinus communis] gi|223546409|gb|EEF47910.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial precursor, putative [Ricinus communis] Length = 334 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 187/297 (62%), Positives = 228/297 (76%), Gaps = 9/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT+V+ QG+TGK GTFHTEQAI Y T +VGG+ PKKG T G +PVF TV Sbjct: 40 VFVDKNTRVICQGITGKNGTFHTEQAIEY-GTTMVGGVTPKKGGTEHLG----LPVFNTV 94 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 AEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMVRVKA L +S Sbjct: 95 AEAKAETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSK 154 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 155 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCV 214 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D +E FLAD TE I+++GEIGG+AEE+AA +K+ G KPIV Sbjct: 215 GIGGDPFNGTNFVDCIEKFLADPQTEGIILIGEIGGTAEEDAAALIKE---SGTDKPIVA 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA++SGGKG A+DKI +KEAG+ + SPA+IG +++++ Sbjct: 272 FIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLKEAGVTVVESPAKIGVAMLDVFK 328 >gi|288941231|ref|YP_003443471.1| succinyl-CoA synthetase subunit alpha [Allochromatium vinosum DSM 180] gi|288896603|gb|ADC62439.1| succinyl-CoA synthetase, alpha subunit [Allochromatium vinosum DSM 180] Length = 291 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 172/297 (57%), Positives = 216/297 (72%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD T+V+ QG TGK GTFH+EQAI Y T +VGG+ P KG ++ PVF Sbjct: 1 MSILVDAKTRVICQGFTGKQGTFHSEQAIAY-GTHLVGGVTPGKGGQRH----LDRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A T A+AS+IYVP A DAI+E+ +A I +IVCITEGIPVLDM+RVKA L + Sbjct: 56 TVSDAVRETGADASMIYVPARFAADAILEAADAGIRVIVCITEGIPVLDMLRVKAALSGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG++TP +CKIGIMPG I + G VGI+SRSGTLTYEAV+QT+Q GLGQST Sbjct: 116 GAVLIGPNCPGVITPGACKIGIMPGHIHQPGRVGIVSRSGTLTYEAVYQTTQAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G +FID L LF D TE I++VGEIGG AEE AA+ ++ E KP+V Sbjct: 176 VGIGGDPIHGLDFIDCLRLFERDPQTEGIILVGEIGGEAEEAAAEVIRTEIS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP G+ MGHAGA+++GG G AE K A++ AG+ SPA++G L E L Sbjct: 232 AYIAGVTAPAGKRMGHAGAIVTGGAGTAEGKYAALEAAGVLTVRSPAQMGARLAERL 288 >gi|171921151|gb|ACB59227.1| succinyl-CoA synthetase alpha chain [Tetrathiobacter mimigardefordensis] Length = 293 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 153/301 (50%), Positives = 215/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K++KV+ QG+TGK G FHT Y + V G++PK+ + G VP+ Sbjct: 1 MSILINKDSKVITQGITGKTGQFHTRMCRDYANGKEAFVAGVNPKRAGEDFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +AKE+T AN SVIYVPP+GA DAI E+++A++ L++CITEGIPV DM+ V+ R+ Sbjct: 57 YASVKDAKEQTGANVSVIYVPPAGAADAIWEAVDADLDLVICITEGIPVRDMLAVRNRMR 116 Query: 119 K--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG++TPD KIGIMP I +KG +G++SRSGTLTYEAV Q ++ GLG Sbjct: 117 QENKKTLLLGPNCPGLITPDELKIGIMPAHICKKGRIGVVSRSGTLTYEAVAQLTELGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + ID+L++F D T+++VM+GEIGG E AA++ KD Sbjct: 177 QSSAVGIGGDPINGLKHIDILKMFNDDPETDAVVMIGEIGGPDEVNAAEWAKDNMS---- 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI +P+ +G+ L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLEIMEACGIRTTRNPSEMGKLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|319942904|ref|ZP_08017187.1| succinyl-CoA synthetase subunit alpha [Lautropia mirabilis ATCC 51599] gi|319743446|gb|EFV95850.1| succinyl-CoA synthetase subunit alpha [Lautropia mirabilis ATCC 51599] Length = 293 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 158/301 (52%), Positives = 212/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCRDYANGKNCFVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA DAI E+++A++ L++CITEGIPV DM+ V+ ++ Sbjct: 57 YGSVKEAKAETGATVSVIYVPPAGAADAIWEAVDADLDLVICITEGIPVRDMLVVRDKMR 116 Query: 119 K--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K + L+GPNCPG++TPD KIGIMPG I RKG +GI+SRSGTLTYEAV Q + GLG Sbjct: 117 KANKKTLLLGPNCPGVITPDELKIGIMPGHIHRKGRIGIVSRSGTLTYEAVAQVTDLGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QSTAVGIGGDP+ G + IDVL++F D T++++M+GEIGG E AA++ KD K Sbjct: 177 QSTAVGIGGDPINGLKHIDVLQMFNDDPDTDAVIMIGEIGGPDEVNAARWAKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI P+ +GR L ++ Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLEVMEACGIRTTRDPSEMGRLLKKV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|11499767|ref|NP_071010.1| succinyl-CoA synthetase, alpha subunit (sucD-2) [Archaeoglobus fulgidus DSM 4304] gi|6647837|sp|O28098|SUCD2_ARCFU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha 2; AltName: Full=Succinyl-CoA synthetase subunit alpha 2; Short=SCS-alpha 2 gi|2648340|gb|AAB89067.1| succinyl-CoA synthetase, alpha subunit (sucD-2) [Archaeoglobus fulgidus DSM 4304] Length = 287 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 151/297 (50%), Positives = 211/297 (71%), Gaps = 10/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I+VD+ TKV+VQG+TG G FHTE+ + Y T++V G+ P KG T G VPV+ Sbjct: 1 MAIIVDERTKVVVQGITGYQGKFHTERMLNY-GTKIVAGVTPGKGGTEVLG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA ANASVI+VP A DA++E+ +A I +IVCITEGIPV D +++ R++++ Sbjct: 56 SVKEAVREADANASVIFVPAPFAADAVMEAADAGIKVIVCITEGIPVHDELKMYWRVKEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPGI++P +GIMP IF+ G+VGI+SRSGTLTY+ + ++ GLGQST Sbjct: 116 GATLIGPNCPGIISPGKTHLGIMPVQIFKPGNVGIVSRSGTLTYQIAYNLTKLGLGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGD + GT+F++VL LF D+ T+++V+VGEIGG EE AA+F+++ KP+V Sbjct: 176 VGIGGDRIIGTDFVEVLRLFEDDKETKAVVLVGEIGGRDEEVAAEFIRE-----MSKPVV 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G+VAG TAPPG+ MGHAGA+I GG G AE KI A++ AG + +P + + E+L Sbjct: 231 GYVAGLTAPPGKRMGHAGAIIEGGVGTAESKIKALEAAGARVGKTPMEVAELVAEIL 287 >gi|166713133|ref|ZP_02244340.1| succinyl-CoA synthetase subunit alpha [Xanthomonas oryzae pv. oryzicola BLS256] Length = 291 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 218/298 (73%), Gaps = 11/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG T +++PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGTTH----IDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVKATGADASVIYVPPPFAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 FPHTVLIGPNCPGVITPGQCKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K+ KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKNHV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAAL 289 >gi|294887515|ref|XP_002772148.1| Succinyl-CoA ligase, putative [Perkinsus marinus ATCC 50983] gi|239876086|gb|EER03964.1| Succinyl-CoA ligase, putative [Perkinsus marinus ATCC 50983] Length = 332 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 180/298 (60%), Positives = 224/298 (75%), Gaps = 5/298 (1%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QGLTGK GTFHT QAI Y T++VGG++PKK T G+ N+P+F V Sbjct: 30 VWVDKNTKVICQGLTGKQGTFHTAQAIEY-GTKMVGGVNPKKAGTTHNVGDKNLPIFANV 88 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE--KS 120 EA++ T A+ASV+YVPP A A +E+IEAEIPL+VCITEGIP DMV+VKA L+ Sbjct: 89 MEARQATGADASVVYVPPFAAASACLEAIEAEIPLLVCITEGIPQHDMVKVKAALKMAGG 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I +KG +G++SRSGTLTYEAV QT++ GLGQST Sbjct: 149 KTRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGVVSRSGTLTYEAVNQTTEVGLGQSTV 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID LE F+ D TE I+++GEIGG+AEEEAA++LK+ K KP+V Sbjct: 209 VGIGGDPFNGTNFIDCLERFVQDPQTEGIILIGEIGGAAEEEAAEWLKENNKD--NKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA+ISGGKG A KI A++ G + SPA +G ++E+ Sbjct: 267 SFIAGVTAPPGRRMGHAGAIISGGKGTAATKIAALEACGANVVRSPADLGIKMLEMYK 324 >gi|148657356|ref|YP_001277561.1| succinyl-CoA synthetase subunit alpha [Roseiflexus sp. RS-1] gi|148569466|gb|ABQ91611.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Roseiflexus sp. RS-1] Length = 290 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 164/297 (55%), Positives = 215/297 (72%), Gaps = 7/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNT++LVQG+TG+ G FHT Q I Y T VV G+ P +G G VPVF Sbjct: 1 MSILVDKNTRLLVQGITGREGEFHTRQMIAY-GTNVVAGVTPGRGGQTAIDGR--VPVFN 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA ++T AN SVIYVP + A DA+ E+ A IPLIVCITEGIP DMV A + + Sbjct: 58 TVAEAVKQTGANVSVIYVPAAFAPDAMREAAAAGIPLIVCITEGIPANDMVATYAFIREH 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG+LTP K+GI+PG+I G VG++S+SGTLTYEAV ++ GLGQ+T Sbjct: 118 GARLIGPNCPGLLTPGQAKVGIIPGNIATPGPVGVVSKSGTLTYEAVDALTRIGLGQTTI 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F+DVLE+F AD T +IV++GEIGG+AE +AA+++ KP+V Sbjct: 178 VGIGGDPIIGTSFVDVLEMFQADPETAAIVLIGEIGGAAEIDAAKYIAAHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG+TAPPG+ MGHAGA+I+GG+G A++KI A++ G+ +A P I + + E+L Sbjct: 234 SFIAGQTAPPGKRMGHAGAIITGGEGTAQEKIAALEAVGVRVARLPTDIAQLVREVL 290 >gi|194366935|ref|YP_002029545.1| succinyl-CoA synthetase subunit alpha [Stenotrophomonas maltophilia R551-3] gi|194349739|gb|ACF52862.1| succinyl-CoA synthetase, alpha subunit [Stenotrophomonas maltophilia R551-3] Length = 291 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 175/298 (58%), Positives = 218/298 (73%), Gaps = 11/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q I Y TQVVGG+ P KG T +++PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMIEY-GTQVVGGVTPGKGGTTH----IDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T ANASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVQSTGANASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HPDTVLIGPNCPGVITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKQFV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ +L Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVVTVRSPGDLGAAIAKL 289 >gi|254512671|ref|ZP_05124737.1| succinyl-CoA synthetase alpha subunit protein [Rhodobacteraceae bacterium KLH11] gi|221532670|gb|EEE35665.1| succinyl-CoA synthetase alpha subunit protein [Rhodobacteraceae bacterium KLH11] Length = 299 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 206/299 (68%), Positives = 256/299 (85%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-GGNVNVPVF 59 MSIL++++TK++VQGLTGK GTFHTEQA+ Y TQ+V G+HPKKG WT G ++P++ Sbjct: 1 MSILLNRDTKIIVQGLTGKTGTFHTEQALAYSNTQMVAGVHPKKGGESWTSAGGQSLPIY 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EAKE T A ASV+YVPP+GA AI E+I+AEI LI CITEG+PV DMVRV +L Sbjct: 61 ASVGEAKEATGATASVVYVPPAGAAAAIEEAIDAEIELISCITEGVPVQDMVRVAEKLRN 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPN PG++T D CKIGIMPGSIF+KGSVG++SRSGTLTYEAV+QT+ GLGQ++ Sbjct: 121 SKSRLVGPNSPGMMTADECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVYQTTVAGLGQTS 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPVKGTEF+DVLELFLAD+ T+SI+M+GEIGGSAEEEAAQFL DEAK+GR KP+ Sbjct: 181 AIGIGGDPVKGTEFVDVLELFLADDDTKSIIMIGEIGGSAEEEAAQFLADEAKKGRSKPV 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGRTMGHAGAVISGGKGGAEDKI AM+ AGI ++ SPA +G+++++ +G Sbjct: 241 AGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIEAMRSAGIVVSDSPAGLGQAMLKAIG 299 >gi|23009909|ref|ZP_00050783.1| COG0074: Succinyl-CoA synthetase, alpha subunit [Magnetospirillum magnetotacticum MS-1] Length = 301 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 212/296 (71%), Positives = 243/296 (82%), Gaps = 7/296 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D +TKV+ QG TGK GTFH+EQAI Y T++VGG P KG + G +PVF Sbjct: 1 MSILIDASTKVICQGFTGKNGTFHSEQAIAY-GTKMVGGTSPGKGGSTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA+E T A+ASV+YVPP GA DAI E+I+AEIPLIVCITEGIPVLDMVRVK LE S Sbjct: 56 TVAEAREATGADASVVYVPPPGAADAICEAIQAEIPLIVCITEGIPVLDMVRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPG++T KIGIMP +IF+ GSVGI+SRSGTLTYEAVFQT+ EGLGQ+TA Sbjct: 116 KSRLVGPNCPGVVTAGESKIGIMPANIFKPGSVGIVSRSGTLTYEAVFQTTVEGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKGTEFI +LELFLADE T+SIVM+GEIGGSAEEEAAQFL DEAKRGRKKP+V Sbjct: 176 VGIGGDPVKGTEFISMLELFLADEKTQSIVMIGEIGGSAEEEAAQFLADEAKRGRKKPMV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEA--GICIAPSPARIGRSLV 294 GF+AG+TAPPGR MGHAGA+ISGGKGGAEDKI AM+ A G+ + A G L Sbjct: 236 GFIAGRTAPPGRRMGHAGAIISGGKGGAEDKIAAMEAAASGLAVPARSAAPGHVLR 291 >gi|294931297|ref|XP_002779820.1| Succinyl-CoA ligase, putative [Perkinsus marinus ATCC 50983] gi|239889506|gb|EER11615.1| Succinyl-CoA ligase, putative [Perkinsus marinus ATCC 50983] Length = 333 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 183/298 (61%), Positives = 227/298 (76%), Gaps = 5/298 (1%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QGLTGK GTFHT QAI Y T++VGG++PKK T G ++P+F V Sbjct: 31 VWVDKNTKVICQGLTGKQGTFHTAQAIEY-GTKMVGGVNPKKAGTTHHVGGKDLPIFANV 89 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 EA+E T A+ASVIYVPPSGA A +E+IEAEIPL+VCITEGIP DMV+VKA L+ + Sbjct: 90 MEAREATGADASVIYVPPSGAASACLEAIEAEIPLVVCITEGIPQHDMVKVKAALKMAGG 149 Query: 122 -SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P+ CKIGIMPG I +KG +G++SRSGTLTYEAV QT++ GLGQST Sbjct: 150 RTRLIGPNCPGIIKPEECKIGIMPGYIHKKGKIGVVSRSGTLTYEAVNQTTEVGLGQSTV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID LE F+ D TE I+++GEIGG+AEEEAA++LK+ K KP+V Sbjct: 210 VGIGGDPFNGTNFIDCLERFVQDPQTEGIILIGEIGGAAEEEAAEWLKENNK--NNKPVV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA+ISGGKG A KI A++ G + SPA +G ++E+ Sbjct: 268 SFIAGVTAPPGRRMGHAGAIISGGKGTAATKIAALEGCGASVVRSPADLGVRMLEMYK 325 >gi|73666780|ref|YP_302796.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ehrlichia canis str. Jake] gi|72393921|gb|AAZ68198.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ehrlichia canis str. Jake] Length = 295 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 183/299 (61%), Positives = 229/299 (76%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVD+NTKV+ QG TG GTFH+EQAI Y T +VGG+ P KG T ++N+PVF Sbjct: 1 MSVLVDRNTKVICQGFTGAHGTFHSEQAIAY-GTNMVGGVTPGKGGT----SHLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +AK T ANA+VIYVP A DAI+E+IEA I LI+CITEGIP+LDMV+VK L S Sbjct: 56 TVKQAKLDTGANATVIYVPAPYAADAILEAIEAGIELIICITEGIPILDMVQVKRALLSS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +S LIGPNCPGI+TP+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQST Sbjct: 116 NSILIGPNCPGIITPEECKIGIMPGYIHKRGHIGVISRSGTLTYEAVAQTTEVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G F D ++LF+ D T I+M+GEIGGS EEEAA+F+K G KP+V Sbjct: 176 IGIGGDPIHGMSFTDCIKLFINDPDTHGIIMIGEIGGSEEEEAAEFIK---LSGTDKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AGKTAPPG+ MGHAGA+ SG G AE KI AMK AGI IA +PA IG++++E + + Sbjct: 233 GFIAGKTAPPGKRMGHAGAISSGTSGSAESKIEAMKNAGIVIAETPAVIGKTMLEAMNN 291 >gi|333029755|ref|ZP_08457816.1| succinyl-CoA synthetase, alpha subunit [Bacteroides coprosuis DSM 18011] gi|332740352|gb|EGJ70834.1| succinyl-CoA synthetase, alpha subunit [Bacteroides coprosuis DSM 18011] Length = 291 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 155/297 (52%), Positives = 213/297 (71%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK TKVLVQG+TG+ G+FHTE+ +L+ TQ+V G P KG T G VPVF Sbjct: 1 MSILIDKKTKVLVQGITGRDGSFHTEK-MLHSHTQIVAGTSPGKGGTTIHG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 V+EA E+T AN S+I+VP A DAI+E+ + I LI+CITEGIP +D+V+ + Sbjct: 56 LVSEAVEKTGANTSIIFVPAPFAADAIMEAAASGIQLIICITEGIPTIDVVKAYKYATRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++ + +GI+P IF+KG +G++SRSGTLTYE V+Q S+ GLGQSTA Sbjct: 116 GALLIGPNCPGLMSSEESLVGILPAQIFKKGPIGVVSRSGTLTYEVVYQLSKAGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV G FID+L F D T+ IV++GEIGG AEE AA+++++ KP+V Sbjct: 176 VGIGGDPVVGLYFIDILRRFELDPETKGIVLIGEIGGDAEECAAEYIREHVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG++AP G+ MGHAGA+IS G G AE+KI ++K AG+ +A P+ I + + ++L Sbjct: 232 AFIAGRSAPAGKQMGHAGAIISSGSGTAEEKIESLKAAGVKVAQKPSEIPQLMKDVL 288 >gi|302879758|ref|YP_003848322.1| succinyl-CoA synthetase, alpha subunit [Gallionella capsiferriformans ES-2] gi|302582547|gb|ADL56558.1| succinyl-CoA synthetase, alpha subunit [Gallionella capsiferriformans ES-2] Length = 294 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 164/301 (54%), Positives = 219/301 (72%), Gaps = 10/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL+DKNT+V+ QG+TGK G FHT + Y V G+ P KG + G VP+ Sbjct: 1 MSILIDKNTRVMTQGMTGKVGQFHTLGCLGYANGANCFVAGVTPNKGGQNFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK++T A SVIYVPP+ A AI E++EA++ L++CITEGIPV DM+R + +++ Sbjct: 57 YNSVLEAKQQTGATVSVIYVPPAYAAAAIDEAVEADLDLVICITEGIPVHDMIRTRDKMK 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q S GLGQS Sbjct: 117 GKRTLLIGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLSALGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + VGIGGDP+ G + +D+L LF D TE+++MVGEIGGS EE A+++KD KKP Sbjct: 177 SCVGIGGDPINGMKHLDILRLFNEDPETEAVIMVGEIGGSDEEACARWIKDNM----KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VGF+AG TAPPG+ MGHAGA+ISGG+GGA+ K+ M+E GI I +PA +GR + ++LG Sbjct: 233 VVGFIAGITAPPGKRMGHAGAIISGGQGGADTKLAVMEECGIHITRNPADMGRVMQKILG 292 Query: 299 S 299 Sbjct: 293 R 293 >gi|24213801|ref|NP_711282.1| succinyl-CoA synthetase subunit alpha [Leptospira interrogans serovar Lai str. 56601] gi|45658412|ref|YP_002498.1| succinyl-CoA synthetase subunit alpha [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24194631|gb|AAN48300.1|AE011292_13 succinyl-CoA synthetase alpha subunit [Leptospira interrogans serovar Lai str. 56601] gi|45601655|gb|AAS71135.1| succinyl-CoA synthetase alpha subunit [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 291 Score = 300 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 162/299 (54%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVD+NTKV+VQG+TGK G+FH Q + Y T+VV G+ P KG + W VPVF Sbjct: 1 MAVLVDENTKVVVQGITGKEGSFHATQMLAY-GTKVVAGVTPGKGGSKWEDK---VPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ ++ + NA+VI+VPP+ A DAIIE I AE+PL++CITEGIP DM++V + L S Sbjct: 57 TIKDSIKNEGVNAAVIFVPPAFAADAIIEGILAELPLVICITEGIPTHDMLKVYSVLRNS 116 Query: 121 SSRLIGPNCPGILTPDSC-KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++L+GPNCPG++TP + K+GIMPG I GSVGI+SRSGTLTYE+V Q +++GLGQST Sbjct: 117 KTKLVGPNCPGVITPRAKQKLGIMPGFIHSPGSVGIVSRSGTLTYESVAQITKQGLGQST 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV G + ++L D T+ IVM+GEIGG++EEEAA+++K+ KKP+ Sbjct: 177 CIGIGGDPVPGMNHTEAIKLLNEDPETKGIVMIGEIGGTSEEEAAEYIKNHV----KKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+AG+TAPPG+ MGHAGA+ISGG G A K+ AM+EAGI + S A +G + + LG Sbjct: 233 VGFIAGQTAPPGKRMGHAGAIISGGLGTATSKMKAMQEAGIQVCQSIAEVGEKMKKALG 291 >gi|320108311|ref|YP_004183901.1| succinyl-CoA synthetase subunit alpha [Terriglobus saanensis SP1PR4] gi|319926832|gb|ADV83907.1| succinyl-CoA synthetase, alpha subunit [Terriglobus saanensis SP1PR4] Length = 291 Score = 300 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 169/299 (56%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVDKNT+++VQG+TG+ GTFH + Y T+VVGG+ P KG T G PVF Sbjct: 1 MAVLVDKNTRLIVQGITGREGTFHAKGCAEY-GTKVVGGVTPGKGGTIHEG----WPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T ANA+VI+VPP A D I+E++ A++PL++CITEGIP LDMV+ + ++ S Sbjct: 56 TVEEAVKETGANATVIFVPPPFAADGILEAVAAQLPLVICITEGIPTLDMVKAWSIVKDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG+++P KIGIMPG I ++G+VGI+SRSGTLTYEAV+Q + G+GQSTA Sbjct: 116 KSVLIGPNCPGVISPGKAKIGIMPGRIHKEGNVGIVSRSGTLTYEAVYQLTTRGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + L+L D TE+I+M+GEIGG+AEE AA F+K KKP+V Sbjct: 176 IGIGGDPIIGTNHVAALKLLNDDPETEAIIMIGEIGGTAEEAAADFIKQYV----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+ISGG+G AE K+ AM+ AGI + SPA IG + +LG Sbjct: 232 GFIAGQTAPPGRRMGHAGAIISGGEGTAESKMAAMEAAGIHVVKSPAEIGEMMARVLGK 290 >gi|21243961|ref|NP_643543.1| succinyl-CoA synthetase subunit alpha [Xanthomonas axonopodis pv. citri str. 306] gi|294625818|ref|ZP_06704435.1| succinyl-CoA synthetase alpha subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666978|ref|ZP_06732207.1| succinyl-CoA synthetase alpha subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|21109573|gb|AAM38079.1| succinyl-CoA synthetase alpha subunit [Xanthomonas axonopodis pv. citri str. 306] gi|292599893|gb|EFF44013.1| succinyl-CoA synthetase alpha subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603267|gb|EFF46689.1| succinyl-CoA synthetase alpha subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 291 Score = 300 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 175/298 (58%), Positives = 218/298 (73%), Gaps = 11/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG T +N+PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGTTH----INLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A E T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVEATGADASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HPDTVLIGPNCPGVITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K+ KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKNHV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAAL 289 >gi|780694|gb|AAA85724.1| succinyl coenzyme A synthetase alpha subunit [Dictyostelium discoideum] Length = 310 Score = 300 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 173/295 (58%), Positives = 219/295 (74%), Gaps = 9/295 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 S+L++KNTKV+ QG TG GTFH++QAI Y T +VGG+ P KG ++++P F T Sbjct: 21 SVLINKNTKVICQGFTGNQGTFHSKQAIEY-GTNMVGGVSPGKGGQ----KHLDLPAFNT 75 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE T ANA+VIYVPP A AI E+I+AE+ L+VCITEGIP DMV+VK L +++ Sbjct: 76 VKEAKEATGANATVIYVPPPHAAAAIKEAIDAEMELVVCITEGIPQQDMVKVKYLLNKQN 135 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 136 KTRLIGPNCPGIIKPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVAQTTAVGLGQSTC 195 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++F D TE I+++GEIGG AEEEAAQ+L D KP+V Sbjct: 196 IGIGGDPFNGTNFIDCLKMFTQDPQTEGIILIGEIGGEAEEEAAQWLIDN---PTDKPVV 252 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG +APPGR MGHAGA+ISGGKG A KI A+K AG+ + SPA++G +++ Sbjct: 253 SFIAGLSAPPGRRMGHAGAIISGGKGDANSKIEALKAAGVTVTFSPAKLGETILR 307 >gi|330959052|gb|EGH59312.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. maculicola str. ES4326] Length = 269 Score = 300 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 163/278 (58%), Positives = 204/278 (73%), Gaps = 9/278 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T +N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVETTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVILIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEA 278 ++AG TAPPG+ MGHAGA+ISGGKG A++K A+++A Sbjct: 232 SYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDA 269 >gi|58581217|ref|YP_200233.1| succinyl-CoA synthetase subunit alpha [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623134|ref|YP_450506.1| succinyl-CoA synthetase subunit alpha [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58425811|gb|AAW74848.1| succinyl-CoA synthetase alpha subunit [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367074|dbj|BAE68232.1| succinyl-CoA synthetase alpha subunit [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 291 Score = 300 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 218/298 (73%), Gaps = 11/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG T +++PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGTTH----IDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVKATGADASVIYVPPPFAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HADTVLIGPNCPGVITPGQCKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K+ KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKNHV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAAL 289 >gi|209875861|ref|XP_002139373.1| succinyl-CoA synthetase, alpha subunit [Cryptosporidium muris RN66] gi|209554979|gb|EEA05024.1| succinyl-CoA synthetase, alpha subunit, putative [Cryptosporidium muris RN66] Length = 339 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 171/302 (56%), Positives = 216/302 (71%), Gaps = 7/302 (2%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN--VNVPVFTT 61 VDKNT+V+ QG+TGK G+FHTEQ ILY TQ+VGG+ P +G W+G ++P+F T Sbjct: 34 FVDKNTRVICQGITGKQGSFHTEQCILY-GTQIVGGVAPNRGGQIWSGSENKFSIPIFNT 92 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK-S 120 + EAK T A A+ IYVPP A AI+++IEAEI +IVCITEGIPV DM+ VK LE Sbjct: 93 LKEAKSVTKATATTIYVPPKNATQAIMDAIEAEIEIIVCITEGIPVHDMIYVKKALEYYK 152 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++ K+GIMP SI + G + I+SRSGTLTYEAV+Q SQ GLGQST Sbjct: 153 KSTLIGPNCPGLIRVGQAKLGIMPASIHKPGEIAIVSRSGTLTYEAVWQVSQCGLGQSTC 212 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA---KRGRKK 237 +GIGGD + GT FIDVL FL+DE T+ IV++GEIGG+AEEEAA +L K KK Sbjct: 213 IGIGGDSLNGTSFIDVLSNFLSDEQTKGIVLIGEIGGNAEEEAADWLLKNNFDEKGQCKK 272 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 PIV F+AG TAPP R MGHAGA+ISGGKGG KI A++ AG+ + +P+ IG + ++ Sbjct: 273 PIVAFIAGSTAPPNRRMGHAGAIISGGKGGTASKIGALENAGVRVVKNPSAIGYEISTIM 332 Query: 298 GS 299 + Sbjct: 333 SN 334 >gi|188575736|ref|YP_001912665.1| succinyl-CoA synthetase subunit alpha [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520188|gb|ACD58133.1| chain A, Succinyl-Coa Synthetase (Succinate-Coa Ligase) (Adp-Forming) (E.C.) [Xanthomonas oryzae pv. oryzae PXO99A] Length = 291 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 218/298 (73%), Gaps = 11/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG T +++PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGTTH----IDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVKATGADASVIYVPPPFAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HADTVLIGPNCPGVITPGQCKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K+ KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKNHI----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAAL 289 >gi|68171548|ref|ZP_00544926.1| Succinyl-CoA ligase, alpha subunit [Ehrlichia chaffeensis str. Sapulpa] gi|88657940|ref|YP_507767.1| succinyl-CoA synthetase, alpha subunit [Ehrlichia chaffeensis str. Arkansas] gi|67999032|gb|EAM85705.1| Succinyl-CoA ligase, alpha subunit [Ehrlichia chaffeensis str. Sapulpa] gi|88599397|gb|ABD44866.1| succinyl-CoA synthetase, alpha subunit [Ehrlichia chaffeensis str. Arkansas] Length = 293 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 186/299 (62%), Positives = 226/299 (75%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+ NTKV+ QG TG GTFH+EQAI Y T +VGG+ P KG TY +N+PVF Sbjct: 1 MSVLVNSNTKVICQGFTGAHGTFHSEQAIAY-GTNMVGGVTPGKGGTYH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +AK ANA+VIYVP A DAI+E+IEAEI LIVCITEGIP LDMV+VK L S Sbjct: 56 TVKQAKLEAKANATVIYVPAPYAADAILEAIEAEIELIVCITEGIPTLDMVQVKHALLNS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SS LIGPNCPGI+TP+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT++ GLGQST Sbjct: 116 SSTLIGPNCPGIITPEECKIGIMPGYIHKRGHIGIVSRSGTLTYEAVAQTTEVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G F D + LF+ D T I+M+GEIGGS EEEAA+F+K G KP+V Sbjct: 176 IGIGGDPIHGMSFTDCIRLFINDPDTHGIIMIGEIGGSEEEEAAEFIK---LSGTNKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AGKTAPPG+ MGHAGA+ SG G AE KI AMK AGI IA +PA IG++++E + + Sbjct: 233 GFIAGKTAPPGKRMGHAGAISSGTSGSAESKIEAMKNAGIIIAETPAVIGKTMLEAMNN 291 >gi|320034579|gb|EFW16523.1| succinyl-CoA synthetase alpha subunit [Coccidioides posadasii str. Silveira] Length = 331 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 173/294 (58%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ T+VL QG TGK GTFH +QAI Y T VVGG +PKK ++ PVF T Sbjct: 36 NLRINSETRVLYQGFTGKQGTFHAQQAIDY-GTNVVGGTNPKKAGEMH----LDRPVFAT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T ANAS I+VPP A +I E+IEAE+PL+VCITEGIP DMVR+ L+ +S Sbjct: 91 VRDAMKETGANASAIFVPPPVAARSIEEAIEAEMPLVVCITEGIPQHDMVRITDILKTQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA+FL+ E K KP V Sbjct: 211 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAEFLRSENKA--NKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALESAGVIVERSPASLGKTLH 322 >gi|124487928|gb|ABN12047.1| putative succinate-CoA ligase, GDP-forming, alpha subunit [Maconellicoccus hirsutus] Length = 286 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 174/285 (61%), Positives = 223/285 (78%), Gaps = 6/285 (2%) Query: 14 QGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANA 73 QG TGK GTFH++QA+ Y T+VVGG+ P KG ++++PVF +V EAK+ T A+A Sbjct: 1 QGFTGKQGTFHSKQALEY-GTKVVGGVSPGKGGK----SHLDLPVFNSVREAKDATGADA 55 Query: 74 SVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSRLIGPNCPGI 132 +VIYVPP GA AIIE++EAE+PLIVCITEGIP DMV+VK L ++ SRLIGPNCPGI Sbjct: 56 TVIYVPPGGAAKAIIEAVEAEMPLIVCITEGIPQQDMVKVKHVLVRQNKSRLIGPNCPGI 115 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 + PD CKIGIMPG + +KG +GI+SRSGTLTYEAV QT+Q GLGQ+ VGIGGDP GT+ Sbjct: 116 IAPDQCKIGIMPGHVHQKGIIGIVSRSGTLTYEAVHQTTQVGLGQTLCVGIGGDPFNGTD 175 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 FID LE+FL D T+ I+++GEIGG AEE AA++L KP+V F+AG TAPPGR Sbjct: 176 FIDCLEVFLKDPETKGIILIGEIGGVAEENAAEYLIQNNSGPNAKPVVSFIAGLTAPPGR 235 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 MGHAGA+ISGGKGGA+DKINA+++AG+ ++ SPA++G L++L+ Sbjct: 236 RMGHAGAIISGGKGGAQDKINALEKAGVVVSRSPAQMGNELLKLM 280 >gi|119181970|ref|XP_001242148.1| hypothetical protein CIMG_06044 [Coccidioides immitis RS] Length = 331 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 174/294 (59%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ TKVL QG TGK GTFH +QAI Y T VVGG +PKK ++ PVF T Sbjct: 36 NLRINSETKVLYQGFTGKQGTFHAQQAIDY-GTNVVGGTNPKKAGEMH----LDRPVFAT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T ANAS I+VPP A +I E+IEAE+PL+VCITEGIP DMVR+ L+ +S Sbjct: 91 VRDAMKETGANASAIFVPPPVAARSIEEAIEAEMPLVVCITEGIPQHDMVRITDILKTQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA+FL+ E K KP V Sbjct: 211 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAEFLRSENKA--NKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALESAGVIVERSPASLGKTLH 322 >gi|152992173|ref|YP_001357894.1| succinyl-CoA synthase, alpha subunit [Sulfurovum sp. NBC37-1] gi|151424034|dbj|BAF71537.1| succinyl-CoA synthase, alpha subunit [Sulfurovum sp. NBC37-1] Length = 290 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 159/299 (53%), Positives = 208/299 (69%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+VQG TGK G+FH EQ I Y T +VGG+ P KG G PVF Sbjct: 1 MSILVNKDTKVIVQGFTGKEGSFHAEQCIDY-GTNIVGGVTPNKGGQVHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + T A S+I+VPP+ GDA++E+ EA I L V ITEG PV DM KA K Sbjct: 56 TVAEAVKETGATVSMIFVPPAFVGDAVMEAAEAGIELAVIITEGAPVKDMQAAKAYATKH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + IGPNCPGI+T + CKIGIMPG IF+KG+VG++S+SGTLTYE Q G G +TA Sbjct: 116 GMKTIGPNCPGIITAEECKIGIMPGMIFKKGNVGLISKSGTLTYEGANQVCNVGYGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + +L +F AD TE IVM+GEIGG E +AA+ +K++ KP+V Sbjct: 176 VGIGGDPIIGLSYKQILPMFEADPDTECIVMIGEIGGDLEIQAAKLIKEQI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP G+TMGHAGA++SG G A++K+ A++ AG+ + SPA IG+++ E+L Sbjct: 232 AFIAGQTAPKGKTMGHAGAIVSGSAGTAKEKMEALEAAGVKVVVSPAEIGKAVKEVLSK 290 >gi|148642288|ref|YP_001272801.1| succinyl-CoA synthetase subunit alpha [Methanobrevibacter smithii ATCC 35061] gi|222444540|ref|ZP_03607055.1| hypothetical protein METSMIALI_00152 [Methanobrevibacter smithii DSM 2375] gi|148551305|gb|ABQ86433.1| succinyl-CoA synthetase, alpha subunit, SucD [Methanobrevibacter smithii ATCC 35061] gi|222434105|gb|EEE41270.1| hypothetical protein METSMIALI_00152 [Methanobrevibacter smithii DSM 2375] Length = 286 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 149/293 (50%), Positives = 204/293 (69%), Gaps = 10/293 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D +TK LVQG+TGK G+FHTEQ + Y T ++ G+ P KG + G VPVF ++ Sbjct: 2 ILLDNDTKCLVQGITGKQGSFHTEQMLEY-NTNILAGVTPGKGGQDFLG----VPVFNSI 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EAKE T N+S+I+VP A DA ESI + L+V I+E IPV D +++ + + Sbjct: 57 EEAKEETGVNSSIIFVPAKFAKDAAFESIRH-LDLVVIISEHIPVHDSLKIMNYAREMDT 115 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PGI+TP K+GIMP IF +G+VG++SRSGTLTYE Q ++ G+GQST VG Sbjct: 116 TVIGPNTPGIITPGVGKLGIMPTHIFEEGNVGVISRSGTLTYEVASQLTRGGIGQSTCVG 175 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT +ID+L+ F D+ TE+IV++GEIGG+AEE AA+F+KD KP+V + Sbjct: 176 IGGDPVIGTNYIDILKKFEEDDDTEAIVLIGEIGGNAEENAAEFIKDNIS----KPVVSY 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 +AG+TAPPG+ MGHAGA+I G G AE KINA+ +AG+ +A P+ I + + Sbjct: 232 IAGRTAPPGKRMGHAGAIIHGSSGTAESKINALTDAGVSVAKMPSEIVDLVRK 284 >gi|292490721|ref|YP_003526160.1| succinyl-CoA synthetase, subunit alpha [Nitrosococcus halophilus Nc4] gi|291579316|gb|ADE13773.1| succinyl-CoA synthetase, alpha subunit [Nitrosococcus halophilus Nc4] Length = 293 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 224/298 (75%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD+ T+V+ QG TGK GTFH++QAI Y TQ+VGG+ P KG + PVF Sbjct: 1 MSILVDEQTRVICQGFTGKQGTFHSQQAIEY-GTQLVGGVTPGKGGQTH----LERPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E T A+A++IYVP + A DAI+E+ I LIVCITEGIPVLDM++VKA L + Sbjct: 56 TVAEAVEATGADATMIYVPAALAADAILEAAAGGIRLIVCITEGIPVLDMLKVKAVLADT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPG++TP +CKIGIMPG+I + G +GI+SRSGTLTYEAV+QTSQ+GLGQST Sbjct: 116 PSRLVGPNCPGVITPGACKIGIMPGNIHQPGRIGIVSRSGTLTYEAVYQTSQKGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP++G F+D L LF D TE +++VGEIGGSAEEEAA++++ KP+V Sbjct: 176 VGIGGDPIQGMSFVDCLALFEQDSQTEGVILVGEIGGSAEEEAAEYIQHHVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG TAP G+ MGHAGA++SGGKG A+ K+ A+ AG+ IA SPA +G + + L Sbjct: 232 AYIAGITAPKGKRMGHAGAIVSGGKGTAKGKVEALSAAGVVIAHSPAEMGECMEQALS 289 >gi|52138570|ref|NP_001002577.2| succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Danio rerio] gi|51858988|gb|AAH81520.1| Succinate-CoA ligase, GDP-forming, alpha subunit [Danio rerio] gi|182891226|gb|AAI64126.1| Suclg1 protein [Danio rerio] Length = 324 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 171/299 (57%), Positives = 223/299 (74%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++KNTKV+ +G TGK GTFH++Q++ Y +Q+VGG+ P KG G +PVF + Sbjct: 27 NLYINKNTKVICRGFTGKQGTFHSQQSLDY-GSQLVGGVSPGKGGKTHLG----LPVFNS 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAK+ T A A+VIYVPP A AIIE+I+AE+PL VCITEGIP DMVRVK RL ++ Sbjct: 82 VKEAKDGTGAEATVIYVPPPFAAAAIIEAIDAEMPLAVCITEGIPQQDMVRVKHRLLRQN 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 142 KTRLVGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D TE I+++GEIGG AEE AA++LK KP+V Sbjct: 202 IGIGGDPFNGTNFIDCLEVFLQDPKTEGIILIGEIGGDAEENAAEYLKQHNSGANAKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 262 SFIAGLTAPPGRRMGHAGAFIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTIFKEFEK 320 >gi|289662935|ref|ZP_06484516.1| succinyl-CoA synthetase subunit alpha [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667063|ref|ZP_06488138.1| succinyl-CoA synthetase subunit alpha [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 291 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 217/298 (72%), Gaps = 11/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG T +++PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGTTH----IDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVKATGADASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HPDTVLIGPNCPGVITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKQYV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAAL 289 >gi|322700273|gb|EFY92029.1| succinyl-CoA ligase alpha-chain precursor [Metarhizium acridum CQMa 102] Length = 389 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 167/297 (56%), Positives = 222/297 (74%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T+VVGG +PKK + +++PVF Sbjct: 92 NLRINSDTKVIFQGFTGKQGTFHAQQAIEY-GTKVVGGTNPKKAGSTH----LDLPVFKN 146 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V+EA + T A A+ ++VPP A I E+++AEIPL+VCITEGIP DMVR+ + L+ +S Sbjct: 147 VSEAVKETGATATALFVPPPVAAAGIEEALQAEIPLVVCITEGIPQHDMVRITSMLKSQS 206 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 207 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 266 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++F DE T+ I+M+GEIGGSAEEEAA+FLK G KP+V Sbjct: 267 VGIGGDPFSGTNFIDCLKVFTEDEDTDGIIMIGEIGGSAEEEAAEFLKQANTVGGGKPVV 326 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APPGR MGHAGA+++GGKGGA+ KI A++ AG+ + SPA +G++L + Sbjct: 327 SFIAGISAPPGRRMGHAGAIVAGGKGGADSKIKALEAAGVIVERSPAGLGKALYDEF 383 >gi|78777249|ref|YP_393564.1| succinyl-CoA synthetase alpha subunit [Sulfurimonas denitrificans DSM 1251] gi|78497789|gb|ABB44329.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Sulfurimonas denitrificans DSM 1251] Length = 290 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 155/299 (51%), Positives = 210/299 (70%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+VQG TGK G+FH EQ + Y T++VGG+ P KG T G PVF Sbjct: 1 MSILVNKDTKVIVQGFTGKEGSFHAEQCLAY-GTKIVGGVTPNKGGTEHLGQ----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A S+I+VPP+ DA++E+ +A I L V ITEG PV DM KA K Sbjct: 56 TVKEAVKTTGATVSMIFVPPAFVADAVMEAADAGIELAVIITEGAPVRDMQAAKAYAIKH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + + IGPNCPGI+T + CKIGIMPG IF+KG++G++S+SGTLTYE Q ++G G STA Sbjct: 116 NMKTIGPNCPGIITAEECKIGIMPGMIFKKGNIGLISKSGTLTYEGANQVVKQGFGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + +L +F AD T +IVM+GEIGG E +AA ++K+ KP+V Sbjct: 176 VGIGGDPIIGLSYKQLLPMFEADPETHAIVMIGEIGGDLEIQAAAYIKEHI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP G+ MGHAGA++SGG G A +K+ A+++AG+ + SPA IG+++ E+L Sbjct: 232 AFIAGQTAPAGKRMGHAGAIVSGGAGTAAEKMAALEDAGVKVVVSPADIGKAIAEVLAK 290 >gi|329943125|ref|ZP_08291899.1| succinate-CoA ligase, alpha subunit [Chlamydophila psittaci Cal10] gi|332287708|ref|YP_004422609.1| succinyl-CoA synthase subunit alpha [Chlamydophila psittaci 6BC] gi|313848282|emb|CBY17283.1| succinyl-CoA synthetase alpha chain [Chlamydophila psittaci RD1] gi|325506919|gb|ADZ18557.1| succinyl-CoA synthase subunit alpha [Chlamydophila psittaci 6BC] gi|328814672|gb|EGF84662.1| succinate-CoA ligase, alpha subunit [Chlamydophila psittaci Cal10] gi|328914961|gb|AEB55794.1| succinyl-Coa synthetase, alpha chain [Chlamydophila psittaci 6BC] Length = 291 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 167/300 (55%), Positives = 217/300 (72%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M + KNT ++ QG+TGKAG+FHTEQ + Y + VGG+ P KG T ++N PV+ Sbjct: 1 MFCSLSKNTPIITQGITGKAGSFHTEQCLAY-GSNFVGGVTPGKGGT----KHLNRPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK+ T A++I+VPP+ A +AIIE+ +A I LIVCITEGIPV DM+ V ++ S Sbjct: 56 SVLEAKQATNCRATMIFVPPAYAAEAIIEAEDAGIELIVCITEGIPVKDMLEVSHVMQYS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPGI+ P CKIGIMPG I GSVG++SRSGTLTYEAV+Q +Q +GQS Sbjct: 116 SSRLIGPNCPGIIKPGVCKIGIMPGYIHLPGSVGVVSRSGTLTYEAVWQLTQRSIGQSLC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FIDVLE F D TE I+M+GEIGGSAEEEAA++++ KP++ Sbjct: 176 IGIGGDPLNGTSFIDVLEEFQNDPQTELILMIGEIGGSAEEEAAEWIQAYC----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG+TAP G+ MGHAGA+ISG G A+ K A++ AG+C+ SPA IG ++ LL SL Sbjct: 232 AFIAGETAPKGKRMGHAGAIISGNSGDAKSKKEALRRAGVCVVESPALIGETVETLLRSL 291 >gi|39941136|ref|XP_360105.1| hypothetical protein MGG_05480 [Magnaporthe oryzae 70-15] gi|145022137|gb|EDK06157.1| hypothetical protein MGG_05480 [Magnaporthe oryzae 70-15] Length = 333 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 167/297 (56%), Positives = 219/297 (73%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKVL QG TGK GTFH +QAI Y TQVVGG +PKK +++PVF Sbjct: 36 NLRINSDTKVLFQGFTGKQGTFHAQQAIDY-GTQVVGGTNPKKAGQTH----LDLPVFAN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VA+ ++T ANA+ I+VPP A I E++ AE+PL+VCITEGIP DMVR+ + L+ ++ Sbjct: 91 VADGVKQTGANATAIFVPPPLAAAGIEEAVAAEVPLVVCITEGIPQHDMVRITSILKSQN 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+M+GEIGGSAEEEAA FL+ KP+V Sbjct: 211 VGIGGDPFSGTNFIDCLKVFLQDGETDGIIMIGEIGGSAEEEAADFLRANNTVNGGKPVV 270 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +AP GR MGHAGA++SGGKGGA+ KI A++ AG+ + PSPA +G++L + Sbjct: 271 SFIAGISAPAGRRMGHAGAIVSGGKGGADSKIKALEAAGVIVEPSPAGLGKALRDEF 327 >gi|317050500|ref|YP_004111616.1| succinyl-CoA synthetase subunit alpha [Desulfurispirillum indicum S5] gi|316945584|gb|ADU65060.1| succinyl-CoA synthetase, alpha subunit [Desulfurispirillum indicum S5] Length = 305 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 168/298 (56%), Positives = 218/298 (73%), Gaps = 7/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+ +T+V+ QG+TG G FHTE A+ Y T++VGG+ P KG T G VPVF Sbjct: 1 MSILVNSDTRVITQGITGSQGLFHTEMALKY-GTRMVGGVTPGKGGTTALDGK--VPVFN 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 +VA+A T ANAS+IYVPP A DAI+E+ +A + +I CITEGIP+LDM+RVK L Sbjct: 58 SVAQAVSETGANASMIYVPPLFAADAIMEAADAGVEIIACITEGIPILDMIRVKDFLRTT 117 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +LIGPNCPGI+TPD CKIGIMPG I ++G +GI+SRSGTLTYEAV Q S LGQST Sbjct: 118 PGIKLIGPNCPGIITPDECKIGIMPGYIHKRGHIGIVSRSGTLTYEAVNQLSSRNLGQST 177 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ G +D+++ F AD+ T ++VM+GEIGGS EE+AAQ++ + R KP+ Sbjct: 178 VVGIGGDPINGLTHLDIMKRFAADDDTLAVVMIGEIGGSNEEKAAQWVAENM---RHKPV 234 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGF+AG TAP G+ MGHAGA++SG G A+ KI+AMK+AGI +AP+ IG + + L Sbjct: 235 VGFIAGATAPEGKRMGHAGAIVSGNTGSAQSKISAMKDAGIRVAPTIVDIGTIMEQFL 292 >gi|282879134|ref|ZP_06287893.1| succinate-CoA ligase, alpha subunit [Prevotella buccalis ATCC 35310] gi|281298776|gb|EFA91186.1| succinate-CoA ligase, alpha subunit [Prevotella buccalis ATCC 35310] Length = 288 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 142/297 (47%), Positives = 197/297 (66%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ +TK++VQG+TG+ G+FH + Y T VVGG P K G +PVF Sbjct: 1 MSILINHDTKLIVQGITGRDGSFHATKMKEY-GTNVVGGTSPGKAGQEVAG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T AN SVI+VP + A DA++E+ +A I LI+CITEG+P LD+V + Sbjct: 56 TVKDAVKATGANTSVIFVPAAFAKDAMLEAADAGIQLIICITEGVPTLDVVEAYRYISDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++LIGPNCPG+++P+ +GIMP +IF+KG G++SRSGTLTY+ V + G GQSTA Sbjct: 116 GAKLIGPNCPGLISPEESMVGIMPTNIFKKGHTGVISRSGTLTYQVVADLTAAGFGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ G F D+LE+F D T+SI ++GEIGG AEE AA ++K KP+V Sbjct: 176 VGVGGDPIVGLYFQDLLEMFQNDPETDSIALIGEIGGDAEERAADYIKQHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F++G+ AP G+ MGHAGA+IS G G A +KI A + AG+ +A I L E + Sbjct: 232 AFISGREAPKGKQMGHAGAIISSGSGTAAEKIAAFEAAGVPVARETCEIPALLKERM 288 >gi|300710739|ref|YP_003736553.1| succinyl-CoA synthetase, alpha subunit [Halalkalicoccus jeotgali B3] gi|299124422|gb|ADJ14761.1| succinyl-CoA synthetase, alpha subunit [Halalkalicoccus jeotgali B3] Length = 289 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 152/298 (51%), Positives = 210/298 (70%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD++T+V+VQG+TG G FHTEQ + Y V G + P +G G VPV+ Sbjct: 1 MSILVDEDTRVVVQGITGGEGKFHTEQMMEYGTNVVAGAV-PGRGGQEVAG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A A+ASVI+VPP+ A DAI ES+++E+ L V ITEGIP DM +V RL + Sbjct: 56 TVSQAVREEDADASVIFVPPAFAADAIFESLDSELDLAVAITEGIPTQDMSKVYKRLSEV 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPG++TPD K+GI+PG+IF G+VG++SRSGTLTY+ V + GLGQ+TA Sbjct: 116 DTHLVGPNCPGLITPDEAKLGILPGNIFSSGNVGLVSRSGTLTYQVVDNLTNRGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F+D L LF D T+++VM GEIGG EE+AA+F+ + P+ Sbjct: 176 VGIGGDPIIGTSFVDALSLFEEDPETDAVVMCGEIGGEDEEQAAEFIAENM----DTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G AE KI+A+ +AG+ + +P + ++ +LL Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAESKIDALNDAGVPVGDTPEEVADNVEDLL 289 >gi|162148724|ref|YP_001603185.1| succinyl-CoA ligase [GDP-forming] alpha-chain [Gluconacetobacter diazotrophicus PAl 5] gi|209545509|ref|YP_002277738.1| succinyl-CoA synthetase subunit alpha [Gluconacetobacter diazotrophicus PAl 5] gi|161787301|emb|CAP56895.1| putative Succinyl-CoA ligase [GDP-forming] alpha-chain [Gluconacetobacter diazotrophicus PAl 5] gi|209533186|gb|ACI53123.1| succinyl-CoA synthetase, alpha subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 293 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 182/298 (61%), Positives = 230/298 (77%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV + T+V+ QG TG GTFH+EQA+ Y T++VGG+ P +G G +PVF Sbjct: 1 MSILVHRGTRVITQGFTGAQGTFHSEQALAY-GTRLVGGVTPGRGGAVHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A+E T A+A+V+YVPP GA DAI+E+I A +PLIVCITEGIPVLDMVRV L +S Sbjct: 56 TVSQAREATGADATVLYVPPDGAADAILEAIAAGMPLIVCITEGIPVLDMVRVHQVLARS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPG++TP CKIGIMPG+I R G VGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 DSVLIGPNCPGVITPGECKIGIMPGAIHRPGRVGIVSRSGTLTYEAVAQTTAAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPVKG +F DVL+ F+AD T+SI+M+GEIGG++E EAA ++D G KKP+V Sbjct: 176 VGIGGDPVKGLDFTDVLKRFIADPDTDSIIMIGEIGGTSEIEAAALIRD---SGTKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAPPGR MGHAGAVI+GG A KI+A++ AGI ++ SPA +G +L+E++ Sbjct: 233 GFIAGATAPPGRRMGHAGAVITGGHETAGAKIDALRAAGIHVSISPALLGHTLLEVMA 290 >gi|94309415|ref|YP_582625.1| succinyl-CoA synthetase subunit alpha [Cupriavidus metallidurans CH34] gi|93353267|gb|ABF07356.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit [Cupriavidus metallidurans CH34] Length = 293 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 156/301 (51%), Positives = 214/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +AKE+T A SVIYVPP+GA AI E+++A++ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YASVKDAKEQTGATVSVIYVPPAGAAAAIWEAVDADLDLVVCITEGIPVRDMMEVKDKMR 116 Query: 119 K--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 RQNKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++K+ K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAYWIKENM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI + +P+ +GR L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLEIMEACGIKVTKNPSEMGRLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|291001767|ref|XP_002683450.1| succinyl-CoA synthetase alpha subunit [Naegleria gruberi] gi|284097079|gb|EFC50706.1| succinyl-CoA synthetase alpha subunit [Naegleria gruberi] Length = 331 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 173/300 (57%), Positives = 227/300 (75%), Gaps = 8/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L++KNT+V+ QG+TGK GTFHT+QAI Y T++VGG+HP+KG N+++P+F + Sbjct: 34 TLLLNKNTRVICQGVTGKQGTFHTKQAIEY-GTKMVGGVHPQKGGQTH--PNMDLPIFAS 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR--VKARLEK 119 V EA+E+ A+ASVIYVPPSGA AI+ESIEAE+PLIVCITE + + + Sbjct: 91 VKEAREKVGASASVIYVPPSGAAQAILESIEAEMPLIVCITEDLELFRKLVPSAPEYGNN 150 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RL+GPNCPG++ P+ KIGIMPG I RKG +GI+SRSGTLTYEAV QT+ LGQST Sbjct: 151 LHIRLVGPNCPGVIKPEESKIGIMPGYIHRKGKIGIVSRSGTLTYEAVSQTTAVNLGQST 210 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP GT FI VL+LFL D TE I+M+GEIGG AEE+AA+FLK+ KKP+ Sbjct: 211 CIGIGGDPFNGTNFIQVLDLFLNDPETEGIIMIGEIGGQAEEDAAEFLKNH---PIKKPV 267 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VGF+AG TAPPGR MGHAGAVISGGKG A KI A+++AG+ ++ SPAR+G ++ +++ + Sbjct: 268 VGFIAGVTAPPGRRMGHAGAVISGGKGDAPSKIKALEDAGVVVSRSPARLGETMKQVMDA 327 >gi|21232523|ref|NP_638440.1| succinyl-CoA synthetase subunit alpha [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767392|ref|YP_242154.1| succinyl-CoA synthetase subunit alpha [Xanthomonas campestris pv. campestris str. 8004] gi|188990493|ref|YP_001902503.1| succinyl-CoA synthetase subunit alpha [Xanthomonas campestris pv. campestris str. B100] gi|21114314|gb|AAM42364.1| succinyl-CoA synthetase alpha subunit [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572724|gb|AAY48134.1| succinyl-CoA synthetase alpha subunit [Xanthomonas campestris pv. campestris str. 8004] gi|167732253|emb|CAP50445.1| succinate-CoA ligase (ADP-forming) alpha subunit [Xanthomonas campestris pv. campestris] Length = 291 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 217/298 (72%), Gaps = 11/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q I Y TQVVGG+ P KG T +++PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMIEY-GTQVVGGVTPGKGGTTH----IDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVQSTGADASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HPDTVLIGPNCPGVITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKQFV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAAL 289 >gi|156743668|ref|YP_001433797.1| succinyl-CoA synthetase subunit alpha [Roseiflexus castenholzii DSM 13941] gi|156234996|gb|ABU59779.1| succinyl-CoA synthetase, alpha subunit [Roseiflexus castenholzii DSM 13941] Length = 290 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 165/297 (55%), Positives = 217/297 (73%), Gaps = 7/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNT++LVQG+TG+ G FHT Q I Y T VV G+ P +G G VPVF Sbjct: 1 MSILVDKNTRLLVQGITGREGEFHTRQMIAY-GTNVVAGVTPGRGGQTAIDGR--VPVFN 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA ++T AN SVIYVP + A DA+ E+ A IPLIVCITEGIP DMV A + + Sbjct: 58 TVAEAVKQTGANVSVIYVPAAFAPDAMREAAAAGIPLIVCITEGIPANDMVATYAFIREH 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG+LTP K+GI+PG+I G VG++S+SGTLTYEAV ++ GLGQ+T Sbjct: 118 GARLIGPNCPGLLTPAQAKVGIIPGNIASPGPVGVVSKSGTLTYEAVDALTRIGLGQTTI 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F+DVLE+F AD TE+IV++GEIGG+AE +AA++++ KP+V Sbjct: 178 VGIGGDPIIGTSFVDVLEMFQADPETEAIVLIGEIGGAAEIDAARYIQAHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA+I+GG+G A++KI A++ G+ +A P I + + E + Sbjct: 234 GFIAGQTAPPGKRMGHAGAIITGGEGTAQEKIAALEAVGVRVARLPTDIAQLVKESM 290 >gi|303318851|ref|XP_003069425.1| succinyl-CoA synthetase alpha subunit, putative [Coccidioides posadasii C735 delta SOWgp] gi|240109111|gb|EER27280.1| succinyl-CoA synthetase alpha subunit, putative [Coccidioides posadasii C735 delta SOWgp] Length = 331 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 173/294 (58%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ T+VL QG TGK GTFH +QAI Y T VVGG +PKK ++ PVF T Sbjct: 36 NLRINSETRVLYQGFTGKQGTFHAQQAIDY-GTNVVGGTNPKKAGEMH----LDRPVFAT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T ANAS I+VPP A +I E+IEAE+PL+VCITEGIP DMVR+ L+ +S Sbjct: 91 VRDAMKETGANASAIFVPPPVAARSIEEAIEAEMPLVVCITEGIPQHDMVRITDILKTQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA+FL+ E K KP V Sbjct: 211 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAEFLRSENKA--NKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALESAGVIVERSPAALGKTLH 322 >gi|158520090|ref|YP_001527960.1| succinyl-CoA synthetase, alpha subunit [Desulfococcus oleovorans Hxd3] gi|158508916|gb|ABW65883.1| succinyl-CoA synthetase, alpha subunit [Desulfococcus oleovorans Hxd3] Length = 289 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 165/298 (55%), Positives = 208/298 (69%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I VDK T+++VQG+TGK G FHT Q + Y T+VV G+ P KG G +PVF Sbjct: 1 MAIFVDKETRLVVQGITGKEGGFHTRQCVAY-GTKVVAGVTPGKGGQDVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A +T AN S+I+VPP+ A DAI E+ A + LIV ITEGIPVLDM+RVK L+ Sbjct: 56 TVADAVHQTGANCSMIFVPPAFAADAICEAAYAGVDLIVAITEGIPVLDMMRVKHILKGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS-VGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPGI+TP KIGIMPG I + G +G++SRSGTLTYE V Q + +G+GQ+T Sbjct: 116 PIRLIGPNCPGIITPGQAKIGIMPGPIHKPGGPIGVVSRSGTLTYEVVHQLTGQGIGQTT 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPV GT+FID L+ F D T IVMVGEIGG+AEE+AA+F+ E KP+ Sbjct: 176 CVGIGGDPVNGTDFIDCLKAFQNDPDTRGIVMVGEIGGNAEEKAAEFIATEV----TKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 VGFVAG TAPPGR MGHAGA+ISG G AE K+ A++ AG+ + + +G + Sbjct: 232 VGFVAGLTAPPGRRMGHAGAIISGKSGTAEGKLAALEGAGVHLCRNLGTLGELCARVF 289 >gi|261350921|ref|ZP_05976338.1| succinyl-CoA synthetase subunit alpha [Methanobrevibacter smithii DSM 2374] gi|288860259|gb|EFC92557.1| succinyl-CoA synthetase subunit alpha [Methanobrevibacter smithii DSM 2374] Length = 286 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 148/293 (50%), Positives = 204/293 (69%), Gaps = 10/293 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D +TK LVQG+TGK G+FHTEQ + Y T ++ G+ P KG + G VPVF ++ Sbjct: 2 ILLDNDTKCLVQGITGKQGSFHTEQMLEY-NTNILAGVTPGKGGQDFLG----VPVFNSI 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EAKE T N+S+I+VP A DA ESI + L+V I+E IPV D +++ + + Sbjct: 57 EEAKEETGVNSSIIFVPAKFAKDAAFESIRH-LDLVVIISEHIPVHDSLKIMNYAREMDT 115 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PGI+TP K+GIMP IF +G+VG++SRSGTLTYE Q ++ G+GQST VG Sbjct: 116 TVIGPNTPGIITPGVGKLGIMPTHIFEEGNVGVISRSGTLTYEVASQLTRGGIGQSTCVG 175 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT +ID+L+ F D+ TE+IV++GEIGG+AEE AA+F+K+ KP+V + Sbjct: 176 IGGDPVIGTNYIDILKKFEEDDDTEAIVLIGEIGGNAEENAAEFIKNNIS----KPVVSY 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 +AG+TAPPG+ MGHAGA+I G G AE KINA+ +AG+ +A P+ I + + Sbjct: 232 IAGRTAPPGKRMGHAGAIIHGSSGTAESKINALTDAGVSVAKMPSEIVDLVRK 284 >gi|302381584|ref|YP_003817407.1| succinyl-CoA synthetase, subunit alpha [Brevundimonas subvibrioides ATCC 15264] gi|302192212|gb|ADK99783.1| succinyl-CoA synthetase, alpha subunit [Brevundimonas subvibrioides ATCC 15264] Length = 300 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 223/299 (74%), Positives = 261/299 (87%), Gaps = 1/299 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 MSILVDKNTK++VQGLTGK G FHTEQA+ Y TQ+V G+HP KG T WTG + ++P++ Sbjct: 1 MSILVDKNTKIIVQGLTGKTGGFHTEQALAYHGTQMVAGVHPTKGGTNWTGSHGESLPIY 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VAEAKE T A+ASVIYVPP+GA AIIE+I+AEIP I CITEGIPVLDMV+VK LE Sbjct: 61 ASVAEAKEATGADASVIYVPPAGAAAAIIEAIDAEIPFITCITEGIPVLDMVKVKRHLEG 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPG+LTPD CKIGIMPGSIF+KGSVG++SRSGTLTYEAVFQT+ EGLGQ+T Sbjct: 121 SKSRLLGPNCPGVLTPDECKIGIMPGSIFKKGSVGVVSRSGTLTYEAVFQTTNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLAD T SI+M+GEIGG AEEEAAQFL DEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADPETTSIIMIGEIGGGAEEEAAQFLIDEAKKGRKKPM 240 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPAR+G++LVE+L Sbjct: 241 AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMEAAGITMSPSPARLGKTLVEVLK 299 >gi|227823163|ref|YP_002827135.1| succinyl-CoA synthetase subunit alpha [Sinorhizobium fredii NGR234] gi|227342164|gb|ACP26382.1| succinyl-CoA synthetase alpha subunit [Sinorhizobium fredii NGR234] Length = 299 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 148/304 (48%), Positives = 203/304 (66%), Gaps = 13/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNT+V+VQG TGK G+FH E Y T VVGG+ P KG G +PVF Sbjct: 1 MSILLDKNTRVIVQGFTGKIGSFHAEDMKRY-GTNVVGGVTPGKGGQAHLG----MPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A + T A+AS+I+VPP A D+I+E+ +A I L VCIT+GIP DM+RVK + + Sbjct: 56 TVKGAVQETGADASIIFVPPPFAADSIMEAADAGIRLCVCITDGIPSQDMIRVKRYMRRY 115 Query: 121 S----SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 LIGPNC G++TP +GIMPGSI+ G +GI+ RSGTL YEA Q G+G Sbjct: 116 RFEDRMTLIGPNCAGMITPGEAMMGIMPGSIYLPGRIGIVGRSGTLGYEAASQMKALGVG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST++GIGGDPV G+ F D+LELF D T++++M+GEIGG E EAA + +D K Sbjct: 176 VSTSIGIGGDPVNGSSFKDMLELFEKDPGTDAVLMIGEIGGPQEAEAALWARDHM----K 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ ++AG +AP GR MGHAGA+IS A++K+ +K AG+ I P+P+ G ++ ++ Sbjct: 232 KPLIAYIAGLSAPKGRRMGHAGAIISAFGESAQEKVEILKSAGVTIVPTPSSFGETVADV 291 Query: 297 LGSL 300 L ++ Sbjct: 292 LSAM 295 >gi|319760466|ref|YP_004124404.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Candidatus Blochmannia vafer str. BVAF] gi|318039180|gb|ADV33730.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Candidatus Blochmannia vafer str. BVAF] Length = 297 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 156/298 (52%), Positives = 212/298 (71%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+++NTKV+ QG TGK +FH++QA+ Y T++VGG+ P KG + G +PVF Sbjct: 1 MSILINRNTKVICQGFTGKKASFHSKQALSY-GTKIVGGVTPGKGGSIHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T A ASVIYVP DAI+E+I ++I LIVCITEGIP+LDM+ +K +L++ Sbjct: 56 TVYEAIQQTHATASVIYVPAPFCKDAILEAIYSKIHLIVCITEGIPILDMLIIKQQLQRQ 115 Query: 121 SSRL-IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++ + IGPNCPG++TP CKIGIMP I G+VG++SRSGTLTYE V Q + GLGQST Sbjct: 116 NTCIMIGPNCPGVITPKQCKIGIMPDYIHNPGNVGVISRSGTLTYEVVKQITDSGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ G+ F D+L+LF D T+ I+M+GEIGG +EE+AA ++K KPI Sbjct: 176 CVGIGGDPILGSNFTDILKLFEQDTQTKLIIMIGEIGGKSEEQAATYIKKYM----TKPI 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + ++AG TAP G+ MGHAGA+ISG +K A+ EAG+ IA + IG+ E+L Sbjct: 232 IAYIAGSTAPKGKRMGHAGAIISGKGTNVYEKYTALSEAGVYIAENFVNIGKMAKEIL 289 >gi|296420574|ref|XP_002839844.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636050|emb|CAZ84035.1| unnamed protein product [Tuber melanosporum] Length = 326 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 169/297 (56%), Positives = 221/297 (74%), Gaps = 8/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L++ +TKV+ QG TGK GTFH +QAI Y T VVGGI P+K + +++ PVF T Sbjct: 31 NLLINADTKVIFQGFTGKQGTFHAQQAIEY-GTNVVGGISPRKAGS----QHLDRPVFGT 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + A+AS I+VPP A +I E+IEAEI L+VCITEGIP DMVRV L+ ++ Sbjct: 86 VKDAISKVGADASAIFVPPPVAAKSIEEAIEAEIKLVVCITEGIPQNDMVRVVDMLKTQN 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI++P CKIGIMPG I ++G +G++SRSGTLTYEAV QT+Q GLGQS Sbjct: 146 KTRLVGPNCPGIISPGQCKIGIMPGFIHKRGRIGVVSRSGTLTYEAVNQTTQVGLGQSLV 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT F D L +FL D+ T+ I+M+GEIGGSAEE+AA +LK + KPIV Sbjct: 206 IGIGGDPFSGTSFTDALSVFLGDDETDGIIMIGEIGGSAEEDAADYLKANN--PKNKPIV 263 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APPGR MGHAGA++SGGKGGAE KI+A+++AG + SPA +G+SL E Sbjct: 264 SFIAGISAPPGRRMGHAGAIVSGGKGGAESKISALEDAGAIVERSPASLGKSLYEQF 320 >gi|295674665|ref|XP_002797878.1| succinyl-CoA ligase subunit alpha [Paracoccidioides brasiliensis Pb01] gi|226280528|gb|EEH36094.1| succinyl-CoA ligase subunit alpha [Paracoccidioides brasiliensis Pb01] Length = 331 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 171/294 (58%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T +VGG +PKK G PVF Sbjct: 36 NLRINSDTKVIYQGFTGKQGTFHAQQAIEY-GTNIVGGTNPKKAGETHLGK----PVFRN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + T A AS I+VPP A +I E+I AE+PL+VCITEGIP DMVR+ L+ +S Sbjct: 91 VEEAMKETGATASAIFVPPPVAASSIEEAIRAEVPLVVCITEGIPQHDMVRITDILKTQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHQRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLK E K KP V Sbjct: 211 IGIGGDPFSGTNFIDCLKIFLKDEETDGIIMIGEIGGSAEEDAAEFLKSENKA--NKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L+ Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALEAAGVIVERSPAALGKTLL 322 >gi|67523679|ref|XP_659899.1| hypothetical protein AN2295.2 [Aspergillus nidulans FGSC A4] gi|40745250|gb|EAA64406.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4] gi|259487689|tpe|CBF86553.1| TPA: succinyl-CoA synthetase alpha subunit, putative (AFU_orthologue; AFUA_5G06130) [Aspergillus nidulans FGSC A4] Length = 329 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 174/294 (59%), Positives = 221/294 (75%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKVL QG TGK GTFH EQAI Y T+VVGG +PKK + +++PVF Sbjct: 34 NLRINADTKVLFQGFTGKQGTFHAEQAIAY-GTKVVGGTNPKKAGSTH----LDLPVFAN 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V+EA + T A AS I+VPP A I E+IEAE+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 89 VSEAVKETGATASAIFVPPPLAAKGIEEAIEAEVPLVVCITEGIPQHDMVRITDILKTQN 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 149 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA+F K K KP V Sbjct: 209 VGIGGDPFSGTNFIDCLRIFLEDEETDGIIMIGEIGGSAEEDAAEFFKANNK--HNKPAV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G+SL+ Sbjct: 267 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALESAGVVVERSPASLGKSLL 320 >gi|251772186|gb|EES52756.1| succinyl-CoA synthetase, alpha subunit [Leptospirillum ferrodiazotrophum] Length = 305 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 165/304 (54%), Positives = 217/304 (71%), Gaps = 14/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD++T+V+VQG+TGK G++H Y T+V+GG+ P KG T G PV+ Sbjct: 1 MSILVDRSTRVIVQGITGKEGSYHATACREY-GTRVLGGVTPGKGGTVHEG----FPVWD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 +V +A + + S+I+VPP+ A DAI+E+ +A + LIVCITEGIPV DM+RV+ L Sbjct: 56 SVRDAVDAVHPDVSLIFVPPAFAADAILEAADAGVELIVCITEGIPVQDMMRVRRILDIR 115 Query: 118 --EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 E + RLIGPNCPGI+TPD KIGIMPG I ++G VG++SRSGTLTYEAV+Q +Q GL Sbjct: 116 HEEGETVRLIGPNCPGIITPDGAKIGIMPGYIHKRGKVGVVSRSGTLTYEAVWQLTQLGL 175 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G+ST VGIGGDPV+G F+DVL LF D TE+IVM+GEIGG EE AA F + Sbjct: 176 GESTCVGIGGDPVRGLNFLDVLALFEKDPETEAIVMIGEIGGDDEERAAAFARAHM---- 231 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP++GF+AG TAPPGR MGHAGA++SGGKG A DK+ A++ GI + +P+ IG+++ E Sbjct: 232 TKPVIGFIAGLTAPPGRRMGHAGAIVSGGKGSARDKMKALESYGIIVVDNPSIIGKTVAE 291 Query: 296 LLGS 299 L Sbjct: 292 TLSK 295 >gi|332295921|ref|YP_004437844.1| succinyl-CoA synthetase, alpha subunit [Thermodesulfobium narugense DSM 14796] gi|332179024|gb|AEE14713.1| succinyl-CoA synthetase, alpha subunit [Thermodesulfobium narugense DSM 14796] Length = 319 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 149/299 (49%), Positives = 201/299 (67%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK +K+LVQG+TG+ G+FHTEQ + Y ++VV G+ PKKG T + VP+F Sbjct: 1 MSILLDKRSKILVQGITGREGSFHTEQMLNYP-SKVVAGVTPKKGGTLFLDK---VPIFD 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 +V EA + T AN SVI+VPP DAI E+I A+I LI+CITEG+ + +M V + L+ K Sbjct: 57 SVEEAVKETGANVSVIFVPPFACQDAIFEAIFAKIKLIICITEGVSLHEMADVYSFLKTK 116 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPG++ P CK GIMP + F G VGI+SRSGTLTYE + + G+GQST Sbjct: 117 KDIRLIGPNCPGVIVPGVCKAGIMPANAFMPGPVGIVSRSGTLTYEISYLLTSNGIGQST 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPV GT F DVL LF D TE + ++GEIGG+ EE+A +F+++ KP+ Sbjct: 177 VVGIGGDPVIGTTFKDVLMLFERDSQTELVFLIGEIGGTDEEDACEFIRE-----MTKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V F++G +AP G+ MGHAGA++ G G + KI A + AG+ +A S + + LG Sbjct: 232 VAFISGASAPEGKRMGHAGAIVYGKMGSVQSKIEAFRSAGVIVAESIDDLLNIAKKSLG 290 >gi|326468569|gb|EGD92578.1| succinyl-CoA ligase alpha-chain [Trichophyton tonsurans CBS 112818] Length = 330 Score = 298 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 173/294 (58%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T VVGG +PKK G PVF + Sbjct: 35 NLRINADTKVIFQGFTGKQGTFHAQQAIDY-GTNVVGGTNPKKAGETHLGK----PVFAS 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + T A AS I+VPPS A +I ESI AE+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 90 VEEAVKETGATASAIFVPPSVAAKSIEESIAAEVPLVVCITEGIPQHDMVRITDMLKSQN 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 150 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA FLK E K KP V Sbjct: 210 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAAFLKSENKA--NKPAV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AG +APPGR MGHAGA++SGGKGGA+ KI+A+++AG+ + SPA +G++L+ Sbjct: 268 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALQDAGVIVERSPASLGKTLL 321 >gi|213851941|ref|ZP_03381473.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 263 Score = 298 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 164/272 (60%), Positives = 205/272 (75%), Gaps = 9/272 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T V+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTNVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++KD KP+V Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 G++AG TAP G+ MGHAGA+I+GGKG A++K Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKF 263 >gi|224535693|ref|ZP_03676232.1| hypothetical protein BACCELL_00557 [Bacteroides cellulosilyticus DSM 14838] gi|224522693|gb|EEF91798.1| hypothetical protein BACCELL_00557 [Bacteroides cellulosilyticus DSM 14838] Length = 291 Score = 298 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 154/299 (51%), Positives = 214/299 (71%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T++LVQG+TG+ G FH + Y T VVGG P KG + G +PVF Sbjct: 1 MSILIDKSTRLLVQGITGRDGHFHAVKMKEY-GTNVVGGTSPGKGGSTVDG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA E+T ANAS+++VP S A DAI+E+ +A I LI+CI+EGIP LD+++ + Sbjct: 56 TMYEAVEKTQANASILFVPASYAADAIMEAADAGIKLIICISEGIPTLDVIKAYRFTQLK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P+ GI+PG++F+KG+VG++SRSGTLTYE V+ + G+GQSTA Sbjct: 116 GAMLIGPNCPGLISPEKSLAGILPGNVFKKGNVGVISRSGTLTYEIVYHLTANGMGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDPV G F ++LE+F D+ TESIVM+GEIGG+AEE AA+++K KP+V Sbjct: 176 IGMGGDPVVGLYFRELLEMFQNDKDTESIVMIGEIGGNAEELAAEYIKKHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG++APPG+ MGHAGA+ISG G AE+KI A+ AGI +A PA + L L + Sbjct: 232 AFIAGQSAPPGKQMGHAGAIISGNSGSAEEKIAALTAAGIQVANEPAEVPILLKASLPN 290 >gi|322436806|ref|YP_004219018.1| succinyl-CoA synthetase, alpha subunit [Acidobacterium sp. MP5ACTX9] gi|321164533|gb|ADW70238.1| succinyl-CoA synthetase, alpha subunit [Acidobacterium sp. MP5ACTX9] Length = 291 Score = 298 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 173/299 (57%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVDKNT+++VQG+TG+ G FH + Y T VVGG+ P KG T G PVF Sbjct: 1 MAVLVDKNTRLIVQGITGREGLFHAQGCRDY-GTNVVGGVTPGKGGTTVDG----FPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T AN +VI+VPP A D I+E+ AEIPL++CITEGIP LDMV+ ++ S Sbjct: 56 TVAEAVASTGANVTVIFVPPPFAADGILEAAAAEIPLVICITEGIPTLDMVKAWDIVKAS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+++P K+GIMPG I ++GSVGI+S+SGTLTYEAV+Q + G+GQSTA Sbjct: 116 KSRLIGPNCPGVISPGKAKVGIMPGRIHKEGSVGIVSKSGTLTYEAVYQLTTRGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID L+L D TE+I+M+GEIGGSAEE AA+++K+ KKP+V Sbjct: 176 IGIGGDPIIGTTHIDALKLLNEDPETEAIIMIGEIGGSAEEAAAKYIKENV----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+ISGG+G A +K+ AM EAGI + SPA IG ++ LLG Sbjct: 232 GFIAGQTAPPGRRMGHAGAIISGGEGTAAEKMKAMAEAGITVVKSPAEIGEAMALLLGK 290 >gi|197099378|ref|NP_001126825.1| succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Pongo abelii] gi|55732769|emb|CAH93082.1| hypothetical protein [Pongo abelii] Length = 346 Score = 298 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 182/298 (61%), Positives = 226/298 (75%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQGK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLYV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE IV++GEIGG+AEE AA+FLK KP+V Sbjct: 225 GIGGDPFNGTDFIDCLEIFLNDSATEGIVLIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEK 342 >gi|225678324|gb|EEH16608.1| succinyl-CoA ligase subunit alpha [Paracoccidioides brasiliensis Pb03] Length = 331 Score = 298 bits (762), Expect = 9e-79, Method: Composition-based stats. Identities = 171/294 (58%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T +VGG +PKK G PVF Sbjct: 36 NLRINGDTKVIYQGFTGKQGTFHAQQAIEY-GTNIVGGTNPKKAGETHLGK----PVFRN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + T A AS I+VPP A +I E+I AE+PL+VCITEGIP DMVR+ L+ +S Sbjct: 91 VEEAMKETGATASAIFVPPPVAASSIEEAIRAEVPLVVCITEGIPQHDMVRITDILKTQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHQRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLK E K KP V Sbjct: 211 IGIGGDPFSGTNFIDCLKIFLKDEETDGIIMIGEIGGSAEEDAAEFLKSENKA--NKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L+ Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALEAAGVIVERSPASLGKTLL 322 >gi|298505175|gb|ADI83898.1| succinyl-CoA synthetase, alpha subunit [Geobacter sulfurreducens KN400] Length = 291 Score = 298 bits (762), Expect = 9e-79, Method: Composition-based stats. Identities = 165/299 (55%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ ++K++VQG+TG++G FHT+Q Y T++V G+ P KG + G +PVF Sbjct: 1 MSILINSDSKIVVQGITGRSGLFHTQQCRDY-GTKIVAGVTPGKGGIHIEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA T AN S+I+VPP A DAI+E+ +A + L VCITEGIPV DMV VK L++S Sbjct: 56 SVEEAVRYTGANVSMIFVPPPAAADAILEAADAGLELAVCITEGIPVRDMVPVKRILQES 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CK+GIMPG I + G +G++SRSGTLTYEAV Q ++ GLGQST Sbjct: 116 RTRLVGPNCPGVITPGECKVGIMPGYIHKPGKIGVVSRSGTLTYEAVKQITEAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G FIDVL+LF D+ TE++ M+GEIGG+AEEEAA ++K+ KKP+ Sbjct: 176 VGIGGDPIIGMNFIDVLKLFNEDKNTEAVFMIGEIGGTAEEEAAYWIKENM----KKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPG+ MGHAGA+I+GGKG AEDKI + E G+ +A SP ++G +++E LG Sbjct: 232 SFIAGVTAPPGKRMGHAGAIITGGKGKAEDKIRTLSECGVVVATSPTKMGVAMLEALGK 290 >gi|39996161|ref|NP_952112.1| succinyl-CoA synthase subunit alpha [Geobacter sulfurreducens PCA] gi|39982926|gb|AAR34385.1| succinyl-CoA synthase, alpha subunit [Geobacter sulfurreducens PCA] Length = 291 Score = 298 bits (762), Expect = 9e-79, Method: Composition-based stats. Identities = 165/299 (55%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ ++K++VQG+TG++G FHT+Q Y T++V G+ P KG + G +PVF Sbjct: 1 MSILINSDSKIVVQGITGRSGLFHTQQCRDY-GTRIVAGVTPGKGGIHIEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA T AN S+I+VPP A DAI+E+ +A + L VCITEGIPV DMV VK L++S Sbjct: 56 SVEEAVRYTGANVSMIFVPPPAAADAILEAADAGLELAVCITEGIPVRDMVPVKRILQES 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP CK+GIMPG I + G +G++SRSGTLTYEAV Q ++ GLGQST Sbjct: 116 RTRLVGPNCPGVITPGECKVGIMPGYIHKPGKIGVVSRSGTLTYEAVKQITEAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G FIDVL+LF D+ TE++ M+GEIGG+AEEEAA ++K+ KKP+ Sbjct: 176 VGIGGDPIIGMNFIDVLKLFNEDKNTEAVFMIGEIGGTAEEEAAYWIKENM----KKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPG+ MGHAGA+I+GGKG AEDKI + E G+ +A SP ++G +++E LG Sbjct: 232 SFIAGVTAPPGKRMGHAGAIITGGKGKAEDKIRTLSECGVVVATSPTKMGVAMLEALGK 290 >gi|78067444|ref|YP_370213.1| succinyl-CoA synthetase subunit alpha [Burkholderia sp. 383] gi|107023584|ref|YP_621911.1| succinyl-CoA synthetase subunit alpha [Burkholderia cenocepacia AU 1054] gi|115352746|ref|YP_774585.1| succinyl-CoA synthetase subunit alpha [Burkholderia ambifaria AMMD] gi|116690668|ref|YP_836291.1| succinyl-CoA synthetase subunit alpha [Burkholderia cenocepacia HI2424] gi|170734012|ref|YP_001765959.1| succinyl-CoA synthetase subunit alpha [Burkholderia cenocepacia MC0-3] gi|171319343|ref|ZP_02908454.1| succinyl-CoA synthetase, alpha subunit [Burkholderia ambifaria MEX-5] gi|172061610|ref|YP_001809262.1| succinyl-CoA synthetase subunit alpha [Burkholderia ambifaria MC40-6] gi|206559350|ref|YP_002230111.1| succinyl-CoA synthetase subunit alpha [Burkholderia cenocepacia J2315] gi|254247314|ref|ZP_04940635.1| Succinyl-CoA synthetase, alpha subunit [Burkholderia cenocepacia PC184] gi|77968189|gb|ABB09569.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Burkholderia sp. 383] gi|105893773|gb|ABF76938.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Burkholderia cenocepacia AU 1054] gi|115282734|gb|ABI88251.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Burkholderia ambifaria AMMD] gi|116648757|gb|ABK09398.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Burkholderia cenocepacia HI2424] gi|124872090|gb|EAY63806.1| Succinyl-CoA synthetase, alpha subunit [Burkholderia cenocepacia PC184] gi|169817254|gb|ACA91837.1| succinyl-CoA synthetase, alpha subunit [Burkholderia cenocepacia MC0-3] gi|171095450|gb|EDT40420.1| succinyl-CoA synthetase, alpha subunit [Burkholderia ambifaria MEX-5] gi|171994127|gb|ACB65046.1| succinyl-CoA synthetase, alpha subunit [Burkholderia ambifaria MC40-6] gi|198035388|emb|CAR51264.1| succinyl-CoA ligase alpha-chain [Burkholderia cenocepacia J2315] Length = 293 Score = 298 bits (762), Expect = 9e-79, Method: Composition-based stats. Identities = 159/301 (52%), Positives = 212/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSS--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA+++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAEWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGITVTRNPSEMGRLLKKA 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|304414845|ref|ZP_07395763.1| succinyl-CoA synthetase alpha subunit (NAD(P)-binding) [Candidatus Regiella insecticola LSR1] gi|304283114|gb|EFL91528.1| succinyl-CoA synthetase alpha subunit (NAD(P)-binding) [Candidatus Regiella insecticola LSR1] Length = 270 Score = 298 bits (762), Expect = 9e-79, Method: Composition-based stats. Identities = 161/279 (57%), Positives = 207/279 (74%), Gaps = 9/279 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K TKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSILINKKTKVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTMHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A ASVIYVP D+I+E+I+A I LI+CITEGIP LDM+ +KA+L++S Sbjct: 56 TVRDAVKETGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLVIKAKLDQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGIMPG I G VG++SRSGTLTYEAV Q + GLGQS+ Sbjct: 116 GVRMIGPNCPGVITPGECKIGIMPGHIHAPGKVGVVSRSGTLTYEAVKQITDIGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G F+D+L+LF AD TE IVM+GEIGG+AEEEAA+++K KP++ Sbjct: 176 VGIGGDPIAGANFVDILKLFQADPQTEIIVMIGEIGGNAEEEAAEYIKKHV----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 ++AG TAP G+ MGHAGA+I+GGKG AE+ + ++ G Sbjct: 232 AYIAGVTAPAGKRMGHAGAIIAGGKGTAEENLPRWRQQG 270 >gi|58584776|ref|YP_198349.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419092|gb|AAW71107.1| Succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 295 Score = 298 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 181/297 (60%), Positives = 227/297 (76%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV K+T+++ QG TG GTFH+EQAI Y T++VGG+ P KG + ++N+PVF Sbjct: 1 MSVLVGKDTRLICQGFTGAQGTFHSEQAISY-GTKMVGGVTPGKGGS----SHLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAKE+T ANA+VIYVP A AI+E+I+AEI LIVCITEGIP+LDMVRVK L S Sbjct: 56 TVAEAKEKTDANATVIYVPAKFAAAAILEAIDAEIELIVCITEGIPILDMVRVKHALISS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 KSRLIGPNCPGIITPEECKIGIMPGHIHKRGHIGIMSRSGTLTYEAVAQTTAVGPGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G F+D +ELFL DE T IV++GEIGG+ EE+ + F+K E KKPIV Sbjct: 176 IGIGGDPIHGMTFVDCMELFLKDEDTHGIVVIGEIGGNEEEDVSHFVKTEK---TKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPGR MGHAGA+IS G A K+ M AGI IA +PA IG+ ++E++ Sbjct: 233 GFIAGQTAPPGRRMGHAGAIISSSGGSAGAKLEVMSSAGIAIAETPAMIGKKILEVM 289 >gi|113866576|ref|YP_725065.1| succinyl-CoA synthetase subunit alpha [Ralstonia eutropha H16] gi|113525352|emb|CAJ91697.1| Succinyl-CoA synthetase alpha chain [Ralstonia eutropha H16] Length = 293 Score = 298 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 156/301 (51%), Positives = 213/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +AK +T A SVIYVPP+GA AI E+++A++ L+VCITEGIPV DM+ VK R+ Sbjct: 57 YASVKDAKAQTGATVSVIYVPPAGAAAAIWEAVDADLDLVVCITEGIPVRDMMEVKDRMR 116 Query: 119 --KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K + L+GPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REKKKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++K+ K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAYWIKENM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI + +P+ +GR L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLEIMEACGIKVTKNPSEMGRLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|226290626|gb|EEH46110.1| succinyl-CoA ligase subunit alpha [Paracoccidioides brasiliensis Pb18] Length = 331 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 171/294 (58%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T +VGG +PKK G PVF Sbjct: 36 NLRINGDTKVIYQGFTGKQGTFHAQQAIEY-GTNIVGGTNPKKAGETHLGK----PVFRN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + T A AS I+VPP A +I E+I AE+PL+VCITEGIP DMVR+ L+ +S Sbjct: 91 VEEAMKETGATASAIFVPPPVASSSIEEAIRAEVPLVVCITEGIPQHDMVRITDILKTQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHQRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLK E K KP V Sbjct: 211 IGIGGDPFSGTNFIDCLKIFLKDEETDGIIMIGEIGGSAEEDAAEFLKSENKA--NKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L+ Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALEAAGVIVERSPASLGKTLL 322 >gi|223634702|sp|O19069|SUCA_PIG RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor Length = 346 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 219/298 (73%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QG TGK GTFH++QA+ Y V G ++ +PVF TV Sbjct: 50 LYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGT-----TPGKGGKTHLGLPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 225 GIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYKEFEK 342 >gi|17545274|ref|NP_518676.1| succinyl-CoA synthetase subunit alpha [Ralstonia solanacearum GMI1000] gi|17427565|emb|CAD14083.1| probable succinyl-coa synthetase alpha chain protein [Ralstonia solanacearum GMI1000] Length = 293 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 160/301 (53%), Positives = 217/301 (72%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK++T A SVIYVPP+GA AI E+++A++ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YASVKEAKDQTGATVSVIYVPPAGAAAAIWEAVDADLDLVVCITEGIPVRDMMEVKDKMR 116 Query: 119 KSS--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K + + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KQNKTTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA+++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAARWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+E GI +P+ +GR L L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEECGIKATKNPSEMGRLLKAL 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|134296850|ref|YP_001120585.1| succinyl-CoA synthetase subunit alpha [Burkholderia vietnamiensis G4] gi|134140007|gb|ABO55750.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Burkholderia vietnamiensis G4] Length = 293 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 160/301 (53%), Positives = 212/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSS--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMQMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGITVTRNPSEMGRLLKKA 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|309779741|ref|ZP_07674498.1| succinyl-CoA synthetase, alpha subunit [Ralstonia sp. 5_7_47FAA] gi|308921480|gb|EFP67120.1| succinyl-CoA synthetase, alpha subunit [Ralstonia sp. 5_7_47FAA] Length = 293 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 162/301 (53%), Positives = 215/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TV +AK +T A SVIYVPP+GA DAI E++EAE+ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YATVKDAKAQTGATVSVIYVPPAGAADAIWEAVEAELDLVVCITEGIPVRDMMMVKDKMR 116 Query: 119 K--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K S + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KAGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAYWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+E GI +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEECGIKTTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|198433234|ref|XP_002123295.1| PREDICTED: similar to predicted protein [Ciona intestinalis] Length = 331 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 172/295 (58%), Positives = 220/295 (74%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ TKV+ QG TGK GTFH++QAI Y T +VGG+ PKK T G +PVF Sbjct: 29 NMKINSQTKVICQGFTGKQGTFHSKQAIAY-GTNMVGGVSPKKAGTNHLG----LPVFKD 83 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS- 120 VAEA+E T A ASVIYVPP A AI+E+I+AEIPL+VCITEGIP DMV+VK RL++ Sbjct: 84 VAEAREATGAEASVIYVPPPFAAAAIMEAIDAEIPLVVCITEGIPQQDMVKVKRRLQQQD 143 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I G++GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 144 KTRLIGPNCPGIILPGECKIGIMPGHIHMPGNIGIVSRSGTLTYEAVHQTTNVGLGQTLC 203 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE+FL D TE I+++GEIGG AEE+AA +L + KP+V Sbjct: 204 VGIGGDPFNGTNFVDCLEVFLNDPQTEGILLIGEIGGGAEEKAAAYLAEHNTGANAKPVV 263 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGA+I+GGKGGAE KI ++++AG+ + SPA +G ++++ Sbjct: 264 SFIAGLTAPPGRRMGHAGAIIAGGKGGAEGKIESLRDAGVNVTLSPAEMGITMIK 318 >gi|323343454|ref|ZP_08083681.1| succinyl-CoA synthetase subunit alpha [Prevotella oralis ATCC 33269] gi|323095273|gb|EFZ37847.1| succinyl-CoA synthetase subunit alpha [Prevotella oralis ATCC 33269] Length = 293 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 145/299 (48%), Positives = 199/299 (66%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TK++VQG+TG+ G+FH + Y T VVGG P K G +PVF Sbjct: 1 MSILINKDTKLIVQGITGRDGSFHASKMKSY-GTNVVGGTSPGKAGQTVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A+ SVI+VP A DA++E+ + I LIVCITEG+P +D V + + Sbjct: 56 TVKDAVAATGADTSVIFVPAPFAKDAMMEAADGGIKLIVCITEGVPTMDAVIAQRYIRMK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG+++P+ +GIMP +IF+KG G++SRSGTLTYE V+ + GLGQSTA Sbjct: 116 GARLIGPNCPGLISPEESMVGIMPTNIFKKGHTGVISRSGTLTYEVVYNLTVNGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDPV G F D+LE+F D T+SI ++GEIGG AEE AA+++K KP+ Sbjct: 176 VGVGGDPVVGLYFQDLLEMFEKDPQTDSIALIGEIGGDAEERAAEYIKAHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F++G+ APPG+ MGHAGA+IS G G A +KI A + AG+ +A + I L + L Sbjct: 232 VFISGRQAPPGKQMGHAGAIISSGSGTASEKIAAFEAAGVPVANETSEIPLLLKKQLEK 290 >gi|77917862|ref|YP_355677.1| succinyl-CoA synthetase subunit alpha [Pelobacter carbinolicus DSM 2380] gi|77543945|gb|ABA87507.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Pelobacter carbinolicus DSM 2380] Length = 298 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 161/299 (53%), Positives = 216/299 (72%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+D++++++VQGLTG +G H Y +QVV G+ P KG T+ ++PVF Sbjct: 1 MAILIDRHSRIVVQGLTGSSGRRHGLLCRDY-GSQVVAGVTPGKGGTHVE----DIPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA ER A+ ++I VPP A +AI+E+ +A + L VCITEGIPV DMV V L S Sbjct: 56 TVAEAVERCQADVTMILVPPQAAAEAILEADQAGVGLAVCITEGIPVRDMVLVNRALTDS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + RLIGPNCPG++TPD CK+GI+PG I R GS+G++SRSGTLTYEAV Q S GLGQST Sbjct: 116 AMRLIGPNCPGLITPDQCKVGILPGDIHRPGSIGVVSRSGTLTYEAVQQLSDAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FID+L LF D TE + ++GEIGGSAEEEAA ++K + KP+ Sbjct: 176 VGIGGDPIIGTSFIDILALFNDDPDTEGVFLIGEIGGSAEEEAAAWIKQYMR----KPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAPPG+ MGHAGA++SGG G AEDKI +++ +G+ +A SPAR+ ++ + L + Sbjct: 232 AYIAGVTAPPGKRMGHAGAIVSGGSGRAEDKIASLRSSGVQVAGSPARMAEAMQDALRN 290 >gi|328953555|ref|YP_004370889.1| succinyl-CoA synthetase, alpha subunit [Desulfobacca acetoxidans DSM 11109] gi|328453879|gb|AEB09708.1| succinyl-CoA synthetase, alpha subunit [Desulfobacca acetoxidans DSM 11109] Length = 290 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 167/297 (56%), Positives = 210/297 (70%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNT V+VQG+TGK G+FH Q I Y T+VV G+ P KG +VPVF Sbjct: 1 MSVLVDKNTHVVVQGITGKEGSFHARQCIAY-GTKVVAGVTPGKGGQKMD----DVPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA AN S+I+VPP+ A DAI+E+ A I +IVCITEGIP L+MV+V RLE + Sbjct: 56 TVKEAVAAAGANTSLIFVPPAFAADAILEAAGAGIKVIVCITEGIPTLEMVKVARRLEGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI++P K+GIMPG I ++G V ++SRSGTLTYEAV+Q + GLGQST Sbjct: 116 DIRLIGPNCPGIISPGQAKVGIMPGPIHQEGPVALVSRSGTLTYEAVYQLTLRGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FID+L LF AD T+ IV++GEIGG+AEEEAA F+K KP+V Sbjct: 176 VGIGGDPIIGTNFIDMLRLFQADPQTQGIVLIGEIGGTAEEEAAAFIKANV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPG+ MGHAGA+ISGG G A DKI A++ AG + + +G + + Sbjct: 232 AFIAGMTAPPGKRMGHAGAIISGGSGRAVDKIAALEAAGATVVRNIGELGAICQQTM 288 >gi|330443808|ref|YP_004376794.1| succinyl-Coa synthetase, alpha chain [Chlamydophila pecorum E58] gi|328806918|gb|AEB41091.1| succinyl-Coa synthetase, alpha chain [Chlamydophila pecorum E58] Length = 291 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 155/300 (51%), Positives = 212/300 (70%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M L+ ++ ++ QG+TGKAG+FHTEQ + Y + VGG+ P KG + +N+PV+ Sbjct: 1 MFQLLSRDLPIITQGITGKAGSFHTEQCLAY-GSNFVGGVTPGKGGSTH----LNLPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA++ T A++I+VPP A +AIIE+ A + LIVCITEGIPV DM+ V +E S Sbjct: 56 SVLEARKETGCQATMIFVPPPFAAEAIIEAEAAGVELIVCITEGIPVRDMLEVANLMENS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SS+LIGPNCPGI+ P +CKIGIMPG I G+VG++SRSGTLTYEAV+Q +Q +GQS Sbjct: 116 SSQLIGPNCPGIIKPGACKIGIMPGYIHLPGNVGLVSRSGTLTYEAVWQLTQRNIGQSVC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FID L F D T+ I+M+GEIGGSAEE+AA+++++ KP+V Sbjct: 176 VGIGGDPLNGTSFIDALLQFERDPQTQCILMIGEIGGSAEEDAAEWIRENCS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAP G+ MGHAGA+IS G A+ K+ A++ AG+ + SPA IG ++ +L L Sbjct: 232 AFIAGATAPKGKRMGHAGAIISSNSGDAQSKMQALRVAGVFVVESPAMIGEAVEAVLQDL 291 >gi|171914559|ref|ZP_02930029.1| succinyl-CoA synthetase, alpha subunit [Verrucomicrobium spinosum DSM 4136] Length = 302 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 161/307 (52%), Positives = 219/307 (71%), Gaps = 12/307 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD +T++LVQG+TG G+ H + ++ Y TQ+V G+ P KG + G VPV+ Sbjct: 1 MSILVDPSTRILVQGITGDFGSRHAKASLDY-GTQLVAGVTPGKGGQTFDHGTHKVPVYD 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T A SVI+VPP A DAI+E ++A + L+VCITEGIPV DM++VK+ ++ S Sbjct: 60 TVDEAVKQTGATVSVIFVPPPFAADAILEGVDAGLDLVVCITEGIPVNDMIKVKSAMQGS 119 Query: 121 SSRLIGPNCPGILTPDS-------CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +RLIGPNCPG++TP + C+IGI PG I ++G++G++SRSGTLTYEAV+Q + Sbjct: 120 KTRLIGPNCPGLVTPGTGDKSYGGCRIGIAPGYIHKRGNIGVVSRSGTLTYEAVWQLTTR 179 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G GQST VGIGGDPV GT +DVL++F D TE I+M+GEIGGSAE EAA++ K+ Sbjct: 180 GYGQSTCVGIGGDPVNGTSHLDVLKMFNEDPETEGIIMIGEIGGSAEAEAARWAKENC-- 237 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KKPI GF+AG TAPPGR MGHAGA++ G + AE K + E GI ++ SPA + +L Sbjct: 238 --KKPIAGFIAGATAPPGRRMGHAGAIVGGEEDTAEAKKKILAECGIAVSDSPADMAVTL 295 Query: 294 VELLGSL 300 + ++G L Sbjct: 296 LRVMGKL 302 >gi|166154166|ref|YP_001654284.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis 434/Bu] gi|166155041|ref|YP_001653296.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|237805175|ref|YP_002889329.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis B/TZ1A828/OT] gi|301335410|ref|ZP_07223654.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis L2tet1] gi|165930154|emb|CAP03638.1| succinyl-CoA synthetase alpha chain [Chlamydia trachomatis 434/Bu] gi|165931029|emb|CAP06592.1| succinyl-CoA synthetase alpha chain [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|231273475|emb|CAX10391.1| succinyl-CoA synthetase alpha chain [Chlamydia trachomatis B/TZ1A828/OT] Length = 291 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 153/298 (51%), Positives = 211/298 (70%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M L+ K+ ++ QG+TGKAG+FHT Q + Y + VGG+ P KG + + +++P+F Sbjct: 1 MLELLSKDLPIITQGITGKAGSFHTTQCVAY-GSNFVGGVTPGKGGSQF----LDLPIFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK+ T AS+I+VPP A +AI E+ +A I LIVCITEGIP+ DM+ V + +EKS Sbjct: 56 SVLEAKQATGCRASMIFVPPPFAAEAIFEAEDAGIELIVCITEGIPIKDMLEVASLMEKS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +S LIGPNCPG++ P CKIGIMPG I G VG++SRSGTLTYEAV+Q +Q +GQS Sbjct: 116 ASSLIGPNCPGVIKPGVCKIGIMPGYIHLPGKVGVVSRSGTLTYEAVWQLTQRKIGQSVC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+ F D TE+++M+GEIGGSAEEEAA +++ + KP++ Sbjct: 176 IGIGGDPLNGTSFIDALQEFEKDSQTEAVLMIGEIGGSAEEEAADWIRQHSS----KPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA+ISG G A K A+++AG+ + SPA IG ++ +L Sbjct: 232 AFIAGATAPKGKRMGHAGAIISGKSGDAFSKQEALRQAGVTVVESPALIGEAVASVLK 289 >gi|53713545|ref|YP_099537.1| succinyl-CoA synthetase alpha chain [Bacteroides fragilis YCH46] gi|60681830|ref|YP_211974.1| succinyl-CoA synthetase alpha chain [Bacteroides fragilis NCTC 9343] gi|253565537|ref|ZP_04842992.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 3_2_5] gi|265763870|ref|ZP_06092438.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 2_1_16] gi|52216410|dbj|BAD49003.1| succinyl-CoA synthetase alpha chain [Bacteroides fragilis YCH46] gi|60493264|emb|CAH08048.1| succinyl-CoA synthetase alpha chain [Bacteroides fragilis NCTC 9343] gi|251945816|gb|EES86223.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 3_2_5] gi|263256478|gb|EEZ27824.1| succinyl-CoA synthetase subunit alpha [Bacteroides sp. 2_1_16] gi|301163322|emb|CBW22872.1| succinyl-CoA synthetase alpha chain [Bacteroides fragilis 638R] Length = 289 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 148/294 (50%), Positives = 205/294 (69%), Gaps = 8/294 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T++LVQG+TG+ G FH ++ Y T VVGG P KG T PVF Sbjct: 1 MSILIDKSTRLLVQGITGRDGLFHAKKMAEY-GTNVVGGTSPGKGGTMIDDT---FPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA RT AN SVI+VP A DAI+E+ +A I LI+CITEGIP LD+++ +E Sbjct: 57 TMHEAVRRTQANTSVIFVPARFAADAIMEAADAGIRLIICITEGIPTLDVIKAYRFVELK 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++LIGPNCPG+++P +GI+PG +F G++G++SRSGTLTYE V + +G+GQSTA Sbjct: 117 GAKLIGPNCPGLISPGESLVGILPGQVFTPGNIGVISRSGTLTYEIVSHLTAKGMGQSTA 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDPV G F D+L + D T++IVM+GEIGG+AEE AA ++++ KP+V Sbjct: 177 IGMGGDPVVGLYFRDLLGMLQNDPQTDAIVMIGEIGGNAEELAATYIREHV----TKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AG++APPG+ MGHAGA+ISG G A +KI+A++ AGI +A P+ I L Sbjct: 233 AFIAGRSAPPGKQMGHAGAIISGSSGSATEKISALEAAGIRVAGEPSEIPDLLK 286 >gi|2258465|gb|AAB94003.1| succinyl-CoA synthetase alpha subunit [Sus scrofa] Length = 333 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 219/298 (73%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QG TGK GTFH++QA+ Y V G ++ +PVF TV Sbjct: 37 LYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGT-----TPGKGGKTHLGLPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL + Sbjct: 92 KEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGK 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 152 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 212 GIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 272 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYKEFEK 329 >gi|167585556|ref|ZP_02377944.1| succinyl-CoA synthetase subunit alpha [Burkholderia ubonensis Bu] Length = 293 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 160/301 (53%), Positives = 212/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSS--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGITVTRNPSEMGRLLKKA 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|327300623|ref|XP_003235004.1| succinyl-CoA synthetase alpha subunit [Trichophyton rubrum CBS 118892] gi|326462356|gb|EGD87809.1| succinyl-CoA synthetase alpha subunit [Trichophyton rubrum CBS 118892] Length = 330 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 173/294 (58%), Positives = 218/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T VVGG +PKK G PVF + Sbjct: 35 NLRINADTKVIFQGFTGKQGTFHAQQAIDY-GTNVVGGTNPKKAGETHLGK----PVFAS 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + T A AS I+VPPS A +I ESI AE+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 90 VEEAVKETGATASAIFVPPSVAAKSIEESIAAEVPLVVCITEGIPQHDMVRITDMLKSQN 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 150 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA FLK E K KP V Sbjct: 210 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAAFLKSENKA--NKPAV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AG +APPGR MGHAGA++SGGKGGA+ KI A+++AG+ + SPA +G++L+ Sbjct: 268 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALQDAGVIVERSPASLGKTLL 321 >gi|78048904|ref|YP_365079.1| succinyl-CoA synthetase subunit alpha [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037334|emb|CAJ25079.1| succinyl-CoA synthetase alpha subunit [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 291 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 217/298 (72%), Gaps = 11/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG T +N+PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGTTH----INLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVQATGADASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HPDTVLIGPNCPGVITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D +LF D TE I+MVGEIGG AEE A+++K+ KKP Sbjct: 176 TCIGIGGDPINGLNFVDCFKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKNHV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAAL 289 >gi|302348870|ref|YP_003816508.1| Succinyl-CoA synthetase alpha chain [Acidilobus saccharovorans 345-15] gi|302329282|gb|ADL19477.1| Succinyl-CoA synthetase alpha chain [Acidilobus saccharovorans 345-15] Length = 293 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 146/300 (48%), Positives = 200/300 (66%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M I+VD+NTKV+VQG+TG+ G+FHT + Y T+VV G+ P KG T G VPV+ Sbjct: 1 MGIIVDENTKVIVQGITGREGSFHTRLMLQY-GTKVVAGVTPGKGGTTVEG----VPVYD 55 Query: 61 TVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 T+ EA + AN S+I+VP A DA+ E+I+A I IV ITE IP+ D + ++ Sbjct: 56 TMDEAVKAHPDANTSIIFVPAKFAADAVFEAIDAGIKTIVVITEHIPIHDAMAFVNYAKE 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S +IGPNCPGI+ P K+GIMP ++F G VG++SRSGTLTYE + S+ GLGQST Sbjct: 116 KGSIIIGPNCPGIINPGKTKVGIMPANVFTPGPVGVMSRSGTLTYEVSYFLSKAGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +G+GGDP+ G F +V E+F D T++IVMVGEIGG AEE A+ +K+ R KPI Sbjct: 176 VIGVGGDPITGLTFPEVAEMFERDPQTKAIVMVGEIGGDAEERVAKMVKEGKIR---KPI 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V F+AG+TAP G+ MGHAGA+I G G +DK+ A+++AG+ +A +P I + + E L Sbjct: 233 VAFIAGRTAPEGKRMGHAGAIIMLGTGAYKDKVAALEDAGVRVAITPYEIPKLVSEALKR 292 >gi|188591291|ref|YP_001795891.1| succinyl-CoA synthetase subunit alpha [Cupriavidus taiwanensis LMG 19424] gi|170938185|emb|CAP63171.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Cupriavidus taiwanensis LMG 19424] Length = 293 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 156/301 (51%), Positives = 213/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +AK +T A SVIYVPP+GA AI E+++A++ L+VCITEGIPV DM+ VK R+ Sbjct: 57 YASVKDAKAQTGATVSVIYVPPAGAAAAIWEAVDADLDLVVCITEGIPVRDMMEVKDRMR 116 Query: 119 K--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 RENKKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAHWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI + +P+ +GR L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLEIMEACGIKVTKNPSEMGRLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|325921601|ref|ZP_08183442.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas gardneri ATCC 19865] gi|325922866|ref|ZP_08184590.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas gardneri ATCC 19865] gi|325923845|ref|ZP_08185454.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas gardneri ATCC 19865] gi|325545679|gb|EGD16924.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas gardneri ATCC 19865] gi|325546659|gb|EGD17789.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas gardneri ATCC 19865] gi|325547912|gb|EGD18925.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas gardneri ATCC 19865] Length = 291 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 215/298 (72%), Gaps = 11/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q I Y TQVVGG+ P KG T +++PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMIEY-GTQVVGGVTPGKGGTTH----IDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TVA+A T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L + Sbjct: 56 TVADAVSATGADASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRA 115 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HPDTVLIGPNCPGVITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKQFV----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +VGF+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L Sbjct: 232 VVGFIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAAL 289 >gi|322708227|gb|EFY99804.1| succinyl-CoA ligase alpha-chain [Metarhizium anisopliae ARSEF 23] Length = 332 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 167/297 (56%), Positives = 221/297 (74%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH QAI Y T+VVGG +PKK + +++PVF Sbjct: 35 NLRINGDTKVIFQGFTGKQGTFHARQAIEY-GTKVVGGTNPKKAGSTH----LDLPVFKN 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V+EA + T A A+ ++VPP A I E+++AEIPL+VCITEGIP DMVR+ + L+ +S Sbjct: 90 VSEAVKETGATATALFVPPPVAAAGIEEALQAEIPLVVCITEGIPQHDMVRITSMLKSQS 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 150 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++F DE T+ I+M+GEIGGSAEEEAA+FLK G KP+V Sbjct: 210 VGIGGDPFSGTNFIDCLKVFTEDEDTDGIIMIGEIGGSAEEEAAEFLKQANTVGGGKPVV 269 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APPGR MGHAGA+++GGKGGA+ KI A++ AG+ + SPA +G++L + Sbjct: 270 SFIAGISAPPGRRMGHAGAIVAGGKGGADSKIKALEAAGVIVERSPAGLGKALYDEF 326 >gi|300947192|ref|ZP_07161402.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 116-1] gi|300453178|gb|EFK16798.1| succinyl-CoA synthetase subunit alpha [Escherichia coli MS 116-1] Length = 289 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 166/298 (55%), Positives = 209/298 (70%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y V G + +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGV-----TPGKGGPPPLGLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 232 GYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 289 >gi|304314712|ref|YP_003849859.1| succinyl-CoA synthase, subunit alpha [Methanothermobacter marburgensis str. Marburg] gi|302588171|gb|ADL58546.1| succinyl-CoA synthase, subunit alpha [Methanothermobacter marburgensis str. Marburg] Length = 289 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 144/298 (48%), Positives = 198/298 (66%), Gaps = 10/298 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D++T+ LVQG+TGK G+FHTEQ + Y T++V G+ P KG + G + V+ +V Sbjct: 2 ILLDEDTRCLVQGITGKQGSFHTEQMLEY-GTRIVAGVTPGKGGQEFLG----LGVYNSV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E +E NAS+I+VP A DA ESI + L+V ITE IPV D +++ E+ Sbjct: 57 EEVREEMDVNASIIFVPAPFAKDAAFESIRH-LDLVVIITEHIPVHDSMQIMEYAERMGK 115 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PGI+TP K+GIMP +IF +G++GI+SRSGTLTYE Q ++ G GQST VG Sbjct: 116 TVIGPNTPGIITPGVGKLGIMPTNIFTEGNIGIVSRSGTLTYEFAAQLTEAGFGQSTCVG 175 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV G F+DVLE F D T+++V++GEIGG AEE AA+++ D KP+ F Sbjct: 176 IGGDPVTGLGFVDVLERFEEDPQTDAVVLIGEIGGDAEERAAEYIGDHMS----KPVFAF 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 ++G TAPPG+ MGHAGA+I GG G A+ K A++ AG + P+ I R L + G+L Sbjct: 232 ISGSTAPPGKRMGHAGAIIEGGAGTAQSKREALEAAGAVVVDRPSAIVRELRRMEGAL 289 >gi|284038109|ref|YP_003388039.1| succinyl-CoA synthetase, subunit alpha [Spirosoma linguale DSM 74] gi|283817402|gb|ADB39240.1| succinyl-CoA synthetase, alpha subunit [Spirosoma linguale DSM 74] Length = 291 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 162/299 (54%), Positives = 215/299 (71%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG G+FH +Q I Y T VVGG+ P KG ++ PVF Sbjct: 1 MSVLVNKDSKVIVQGFTGSEGSFHAQQMIEY-GTNVVGGVTPGKGGQTH----LDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ++ AN S+I+VPP+ A DAI+E+ EA I +I+CITEGIP DMV VK L Sbjct: 56 TVQQAVDQAGANVSIIFVPPAFAADAIMEAAEAGIKVIICITEGIPTEDMVAVKNYLSDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++T D CK+GIMPG IF KG++GI+S+SGTLTYEAV Q ++ GLGQSTA Sbjct: 116 DVRLIGPNCPGVMTADECKVGIMPGFIFTKGTIGIVSKSGTLTYEAVDQLTKAGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE+IVM+GEIGG E EAA+++K + G +KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPDTEAIVMIGEIGGGMEAEAARWIKAD---GNRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAP GR MGHAGA++ G A K+ M+E GI + SPA IG ++++ LG Sbjct: 233 GFIAGQTAPKGRRMGHAGAIVGGADDTAAAKMAIMRECGIHVVESPALIGDTMLKALGK 291 >gi|237750567|ref|ZP_04581047.1| succinyl-CoA synthetase alpha subunit [Helicobacter bilis ATCC 43879] gi|229373657|gb|EEO24048.1| succinyl-CoA synthetase alpha subunit [Helicobacter bilis ATCC 43879] Length = 296 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 160/301 (53%), Positives = 209/301 (69%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK G+FH+EQ + Y TQ+VGG+ P KG + G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEGSFHSEQCMAY-GTQIVGGVTPNKGGSEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A S+I+VPP+ DAIIE+ I L V ITEG P D++ K +K Sbjct: 56 TVKEAVAKTGATVSMIFVPPAFVADAIIEAAAGGIKLAVVITEGAPTKDIMFAKMYAKKQ 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS--VGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPGI+T D CKIGIMPG IF+K S +G++S+SGTLTYE+ Q +GLG S Sbjct: 116 GMDMIGPNCPGIITSDECKIGIMPGYIFKKSSTNIGLISKSGTLTYESANQLVTQGLGIS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDP+ G + +L +F AD T++IVMVGEIGGS E +AA +K++ KKP Sbjct: 176 TAVGIGGDPIIGLSYKQILPMFEADPETKAIVMVGEIGGSLEIDAAALIKEQI----KKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V F++G TAP G+ MGHAGA++SGGKG A +K A++ AG+ +A SPA IG ++ +LL Sbjct: 232 VVAFISGATAPKGKRMGHAGAIVSGGKGTAAEKQEALRAAGVMVAESPAVIGETMKKLLA 291 Query: 299 S 299 Sbjct: 292 D 292 >gi|255546902|ref|XP_002514509.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial precursor, putative [Ricinus communis] gi|223546408|gb|EEF47909.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial precursor, putative [Ricinus communis] Length = 334 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 186/297 (62%), Positives = 228/297 (76%), Gaps = 9/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNT ++ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF TV Sbjct: 40 VFVDKNTGLICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNTV 94 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 AEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMVRVKA L +S Sbjct: 95 AEAKAETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSK 154 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST V Sbjct: 155 TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCV 214 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT F+D +E FLAD TE I+++GEIGG+AEE+AA +K+ G KPIV Sbjct: 215 GIGGDPFNGTNFVDCIEKFLADPQTEGIILIGEIGGTAEEDAAALIKE---SGTDKPIVA 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA++SGGKG A+DKI +KEAG+ + SPA+IG +++++ Sbjct: 272 FIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLKEAGVTVVESPAKIGVAMLDVFK 328 >gi|241662077|ref|YP_002980437.1| succinyl-CoA synthetase subunit alpha [Ralstonia pickettii 12D] gi|240864104|gb|ACS61765.1| succinyl-CoA synthetase, alpha subunit [Ralstonia pickettii 12D] Length = 293 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 161/301 (53%), Positives = 215/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TV +AK +T A SVIYVPP+GA +AI E++EAE+ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YATVKDAKAQTGATVSVIYVPPAGAANAIWEAVEAELDLVVCITEGIPVRDMMMVKDKMR 116 Query: 119 K--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K S + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KAGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAYWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+E GI +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEECGIKTTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|194899962|ref|XP_001979526.1| GG15952 [Drosophila erecta] gi|190651229|gb|EDV48484.1| GG15952 [Drosophila erecta] Length = 342 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 168/300 (56%), Positives = 226/300 (75%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K TKVLVQG TGK TFH+E++I Y T +VGG++PKKG T G PVF + Sbjct: 32 NLKINKQTKVLVQGFTGKQATFHSEESIKY-GTNIVGGVNPKKGGTEHLGK----PVFKS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA E+ +A+VI++PP A + I +IE+EI LIV ITEGIP +DMVR+ L+ + Sbjct: 87 VAEAVEKAKPDATVIFIPPPSAAEGICSAIESEIGLIVAITEGIPQVDMVRILQMLKCQE 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++PD CKIGIMPG I ++G VGI+SRSGTLTYE+V QT+ GLGQ+ Sbjct: 147 KSRLLGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP GT FID L++FL+D+ + IVM+GEIGGSAEEEAA FLK++ KP+V Sbjct: 207 VGLGGDPFNGTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEEAADFLKEKNTGCEAKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAPPGR MGHAGA+I+GGKG A+DK+ A+++ G+ + +P +G +L+E + L Sbjct: 267 GFIAGQTAPPGRRMGHAGAIIAGGKGAAKDKVAALEKVGVRMTANPCHLGSTLLEEMIRL 326 >gi|15606732|ref|NP_214112.1| succinyl-CoA ligase alpha subunit [Aquifex aeolicus VF5] gi|6647848|sp|O67547|SUCD_AQUAE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|2983962|gb|AAC07509.1| succinyl-CoA ligase alpha subunit [Aquifex aeolicus VF5] Length = 305 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 159/300 (53%), Positives = 219/300 (73%), Gaps = 11/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+K+TKV+VQG+TGK G+FH +Q Y TQVV G+ P KG G +PVF Sbjct: 1 MAILVNKDTKVVVQGITGKEGSFHAKQCKEY-GTQVVAGVTPGKGGMEVEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T AN S+I+VP A DAI+E+++A I L+VCITEGIPV DM+ VK + K+ Sbjct: 56 TVKEAVKETGANCSLIFVPAPFAADAIVEALDAGIELVVCITEGIPVKDMMMVKDYMLKN 115 Query: 121 --SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +++L+GPNCPG++TP K+GIMPG IF++G +GI+SRSGTLTYEA +Q ++ GLGQS Sbjct: 116 YPNAKLVGPNCPGVITPGEAKVGIMPGHIFKRGKIGIVSRSGTLTYEAAYQLTKYGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV G DV+E+F D TE+I+M+GEIGG+ EEEA + ++ KP Sbjct: 176 TAVGIGGDPVHGLTHRDVIEMFNKDPETEAILMIGEIGGTEEEEA----AEYIEKEVDKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + ++AG TAPPG+ MGHAGA+I GGKG A+ K+ A+++AG + +PA+IG ++ ++L Sbjct: 232 VFAYIAGITAPPGKRMGHAGAIIMGGKGTAKAKMEALEKAGAYVIENPAKIGETVAKILK 291 >gi|261198353|ref|XP_002625578.1| succinyl-CoA synthetase alpha subunit [Ajellomyces dermatitidis SLH14081] gi|239594730|gb|EEQ77311.1| succinyl-CoA synthetase alpha subunit [Ajellomyces dermatitidis SLH14081] gi|239610147|gb|EEQ87134.1| succinyl-CoA synthetase alpha subunit [Ajellomyces dermatitidis ER-3] gi|327356378|gb|EGE85235.1| succinyl-CoA ligase alpha-chain [Ajellomyces dermatitidis ATCC 18188] Length = 331 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 169/294 (57%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T +VGG +PKK G PVF T Sbjct: 36 NLRINSDTKVIYQGFTGKQGTFHAQQAIEY-GTNIVGGTNPKKAGETHLGK----PVFAT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A +I E+IE+E+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 91 VRDAVKETGATASAIFVPPPVAAKSIEEAIESEVPLVVCITEGIPQHDMVRITDILKTQN 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D+ T+ I+M+GEIGGSAEEEAA+F K E KP V Sbjct: 211 VGIGGDPFSGTNFIDCLKVFLKDDETDGIIMIGEIGGSAEEEAAEFFKQENVG--NKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L+ Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALEAAGVIVERSPAALGKTLL 322 >gi|71275181|ref|ZP_00651468.1| Succinyl-CoA ligase, alpha subunit [Xylella fastidiosa Dixon] gi|71899819|ref|ZP_00681969.1| Succinyl-CoA ligase, alpha subunit [Xylella fastidiosa Ann-1] gi|170731174|ref|YP_001776607.1| succinyl-CoA synthetase subunit alpha [Xylella fastidiosa M12] gi|71163990|gb|EAO13705.1| Succinyl-CoA ligase, alpha subunit [Xylella fastidiosa Dixon] gi|71730410|gb|EAO32491.1| Succinyl-CoA ligase, alpha subunit [Xylella fastidiosa Ann-1] gi|167965967|gb|ACA12977.1| succinyl-CoA synthetase, alpha subunit [Xylella fastidiosa M12] Length = 290 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 171/297 (57%), Positives = 212/297 (71%), Gaps = 10/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG +++PVF Sbjct: 1 MSVLVNKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGNTH----IDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A+ASVIYVPP A DAI+E+ A I +IV ITEGIPVLDM+RVK L+ S Sbjct: 56 TVCEAVQNTGADASVIYVPPPFAADAILEAAAAGIKVIVAITEGIPVLDMLRVKNVLKAS 115 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PEITLIGPNCPGVITPGECKIGIMPGHIHKPGHIGIVSRSGTLTYEAVKQTTDVGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G F+D L+LF D T+ I+MVGEIGG AEE A+++K KKP+ Sbjct: 176 CIGIGGDPINGLNFVDALKLFNNDPQTKGIIMVGEIGGDAEEAGAEYIKHHV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 VGF+AG +AP G+ MGHAGA+ SGG G AE K AM++AGI SP +G ++ L Sbjct: 232 VGFIAGASAPKGKRMGHAGAIASGGSGTAEGKFAAMEKAGIKTVRSPGDLGAAIASL 288 >gi|162457427|ref|YP_001619794.1| succinate--CoA ligase (ADP-forming) [Sorangium cellulosum 'So ce 56'] gi|161168009|emb|CAN99314.1| Succinate--CoA ligase (ADP-forming) [Sorangium cellulosum 'So ce 56'] Length = 293 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 157/290 (54%), Positives = 208/290 (71%), Gaps = 8/290 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+T+V+ QG+TG G+ H I Y T+VV G+ P +G + VP+F Sbjct: 1 MSILVNKDTRVVFQGITGAYGSQHARACIEY-GTKVVAGVTPGRGGQRFEDK---VPIFD 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A A S I+VPP GA DAI E+I+A L++CIT+G+PVLDM+RV+ LE Sbjct: 57 TVEQAVRNEGAEVSCIFVPPVGAADAITEAIDAGCKLVICITDGVPVLDMIRVRRFLEGK 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP CKIGIMPG I +KG +G+LSRSGTLTYEAV Q S G+GQS+ Sbjct: 117 PARLIGPNCPGVITPGECKIGIMPGHIHKKGHIGVLSRSGTLTYEAVGQLSALGIGQSSC 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV G +FIDVLELF D T +V++GEIGG+AE+ AA ++K + KKP+ Sbjct: 177 VGIGGDPVGGMDFIDVLELFNQDPDTHGVVLIGEIGGTAEQRAAAWIK----KNMKKPVA 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 F+AG+ APPG+ MGHAGA+I+GG+G A +KI A++ AG +A +PA +G Sbjct: 233 AFIAGRAAPPGKRMGHAGAIIAGGEGTAAEKIAALEAAGAKVAATPAEMG 282 >gi|325520206|gb|EGC99380.1| succinyl-CoA synthetase subunit alpha [Burkholderia sp. TJI49] Length = 293 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 160/301 (53%), Positives = 212/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAKE T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKEETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSS--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A K+ M+ GI + +P+ +GR L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAAAKLEIMEACGITVTRNPSEMGRLLKKA 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|169765193|ref|XP_001817068.1| succinyl-CoA ligase [GDP-forming] subunit alpha [Aspergillus oryzae RIB40] gi|238503510|ref|XP_002382988.1| succinyl-CoA synthetase alpha subunit, putative [Aspergillus flavus NRRL3357] gi|83764922|dbj|BAE55066.1| unnamed protein product [Aspergillus oryzae] gi|220690459|gb|EED46808.1| succinyl-CoA synthetase alpha subunit, putative [Aspergillus flavus NRRL3357] Length = 330 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 172/297 (57%), Positives = 220/297 (74%), Gaps = 8/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH EQAI Y T+VVGG +PKK + ++ PVF Sbjct: 35 NLRINADTKVIFQGFTGKQGTFHAEQAIAY-GTKVVGGTNPKKAGSTH----LDRPVFAN 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A I E+IEAE+PL VCITEGIP DMVR+ L+ ++ Sbjct: 90 VRDAVKETGATASAIFVPPPLAAKGIEEAIEAEVPLAVCITEGIPQHDMVRITDILKTQN 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 150 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLK K KP V Sbjct: 210 VGIGGDPFSGTNFIDCLKIFLEDEETDGIIMIGEIGGSAEEDAAEFLKANNK--HNKPAV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L+ Sbjct: 268 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALEAAGVIVERSPASLGKALLNEF 324 >gi|161523834|ref|YP_001578846.1| succinyl-CoA synthetase subunit alpha [Burkholderia multivorans ATCC 17616] gi|189351404|ref|YP_001947032.1| succinyl-CoA synthetase subunit alpha [Burkholderia multivorans ATCC 17616] gi|221200156|ref|ZP_03573199.1| succinyl-CoA synthetase, alpha subunit [Burkholderia multivorans CGD2M] gi|221206691|ref|ZP_03579703.1| succinyl-CoA synthetase, alpha subunit [Burkholderia multivorans CGD2] gi|221211338|ref|ZP_03584317.1| succinyl-CoA synthetase, alpha subunit [Burkholderia multivorans CGD1] gi|254251509|ref|ZP_04944827.1| Succinyl-CoA synthetase [Burkholderia dolosa AUO158] gi|124894118|gb|EAY67998.1| Succinyl-CoA synthetase [Burkholderia dolosa AUO158] gi|160341263|gb|ABX14349.1| succinyl-CoA synthetase, alpha subunit [Burkholderia multivorans ATCC 17616] gi|189335426|dbj|BAG44496.1| succinyl-CoA synthetase alpha chain [Burkholderia multivorans ATCC 17616] gi|221168699|gb|EEE01167.1| succinyl-CoA synthetase, alpha subunit [Burkholderia multivorans CGD1] gi|221173346|gb|EEE05781.1| succinyl-CoA synthetase, alpha subunit [Burkholderia multivorans CGD2] gi|221180395|gb|EEE12799.1| succinyl-CoA synthetase, alpha subunit [Burkholderia multivorans CGD2M] Length = 293 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 161/301 (53%), Positives = 212/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAKE T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKEETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSS--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGIKVTRNPSEMGRLLKAA 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|73540237|ref|YP_294757.1| succinyl-CoA synthetase subunit alpha [Ralstonia eutropha JMP134] gi|72117650|gb|AAZ59913.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ralstonia eutropha JMP134] Length = 293 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 156/301 (51%), Positives = 211/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +AK +T A SVIYVPP+GA AI E+++A++ L+VCITEGIPV DM+ VK R+ Sbjct: 57 YASVKDAKAQTGATVSVIYVPPAGAAAAIWEAVDADLDLVVCITEGIPVRDMMEVKDRMR 116 Query: 119 K--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 RENKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAYWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI + +P+ + R L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLEIMEACGITVTKNPSEMARLLKAK 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|110598887|ref|ZP_01387138.1| succinyl-CoA synthetase, alpha subunit [Chlorobium ferrooxidans DSM 13031] gi|110339500|gb|EAT58024.1| succinyl-CoA synthetase, alpha subunit [Chlorobium ferrooxidans DSM 13031] Length = 299 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 173/304 (56%), Positives = 227/304 (74%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T++LVQG+TG GTFHT Q + Y T VV G+ P KG + G + Sbjct: 1 MSVLVNKDTRLLVQGITGGEGTFHTSQILEY-GTNVVAGVTPGKGGVLYHGNEKDKFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV +A E+ ANA+VI+VP + A DAI+E+ A + +I+CITEGIPV DM++ A Sbjct: 60 VPVFNTVRDAVEKAEANATVIFVPAAFAADAIMEAAAAGLKVIICITEGIPVNDMMKAYA 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 ++K + L+GPNCPG++TP KIGIMPG I +KG++G++SRSGTLTYEAV Q SQ GL Sbjct: 120 FVQKKGALLVGPNCPGVITPGEAKIGIMPGFIHKKGTIGVVSRSGTLTYEAVHQLSQVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT FID ++LF DE TE +VM+GEIGGSAEEEAA+++ Sbjct: 180 GQSTCIGIGGDPIIGTRFIDAIKLFANDEETEGLVMIGEIGGSAEEEAAEYISKH----F 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG AEDKI AM+ AGI + SPA +G ++++ Sbjct: 236 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAEDKIKAMEAAGIHVVDSPADLGEAMLK 295 Query: 296 LLGS 299 LG Sbjct: 296 ALGR 299 >gi|228473900|ref|ZP_04058642.1| succinyl-CoA synthetase, alpha subunit [Capnocytophaga gingivalis ATCC 33624] gi|228274741|gb|EEK13575.1| succinyl-CoA synthetase, alpha subunit [Capnocytophaga gingivalis ATCC 33624] Length = 290 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 166/298 (55%), Positives = 215/298 (72%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K+LVQG TG GTFH EQ I Y T VVGG+ P KG G PVF Sbjct: 1 MSVLVNKNSKILVQGFTGSEGTFHAEQMIQY-GTNVVGGVTPNKGGQTHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E+ A+ S+I+VPP+ A DAI+E+ EA I +I+ ITEGIPV DMV+V A ++ Sbjct: 56 SVKEAVEKVGADTSIIFVPPAFAADAIMEAAEAGIKVIITITEGIPVADMVKVAAYIKDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP+ K+GIMPG +F+KG VGI+S+SGTLTYEA Q ++GLG STA Sbjct: 116 DCRLIGPNCPGVITPEEAKVGIMPGFVFKKGKVGIVSKSGTLTYEAADQVVRQGLGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +ELF+ D TE IVM+GEIGG E EAA+++K+ G KKP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELFMNDPETELIVMIGEIGGQLEVEAARWIKE---TGNKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + AE K M+E GI + SPA+IG + E+L Sbjct: 233 GFIAGETAPKGRTMGHAGAIVGGSEDTAEAKKRIMRECGIHVVDSPAKIGEKVKEVLK 290 >gi|315048319|ref|XP_003173534.1| succinyl-CoA ligase subunit alpha [Arthroderma gypseum CBS 118893] gi|311341501|gb|EFR00704.1| succinyl-CoA ligase subunit alpha [Arthroderma gypseum CBS 118893] Length = 330 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 175/294 (59%), Positives = 220/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++++TKV+ QG TGK GTFH +QAI Y T VVGG +PKK G PVF + Sbjct: 35 NLRINQDTKVIFQGFTGKQGTFHAQQAIDY-GTNVVGGTNPKKAGETHLGK----PVFAS 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + T A AS I+VPPS A +I ESI AE+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 90 VAEAVKETGATASAIFVPPSVAAKSIEESIAAEVPLVVCITEGIPQHDMVRITDMLKSQN 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 150 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA FLK E K KP V Sbjct: 210 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAAFLKSENKA--NKPAV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AG +APPGR MGHAGA++SGGKGGA+ KI A++EAG+ + SPA +G++L+ Sbjct: 268 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALQEAGVIVERSPAALGKTLL 321 >gi|309792412|ref|ZP_07686879.1| succinyl-CoA synthetase, alpha subunit [Oscillochloris trichoides DG6] gi|308225567|gb|EFO79328.1| succinyl-CoA synthetase, alpha subunit [Oscillochloris trichoides DG6] Length = 291 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 167/298 (56%), Positives = 213/298 (71%), Gaps = 7/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ T++LVQG+TGK G FHT Q I Y TQVV G+ P +G G VPVF Sbjct: 1 MSILINNETRLLVQGITGKEGEFHTRQMIAY-GTQVVAGVVPGRGGQTAIDG--QVPVFN 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T AN SVIYVP + A DAI ES A IPL+VCITEGIP LDMV +++ Sbjct: 58 TVREAVEATGANVSVIYVPAAFAPDAIRESAAAGIPLVVCITEGIPALDMVATYEFVQQC 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP + K+GI+PG+I G VG++S+SGTLTYEAV ++ GLGQS+ Sbjct: 118 GSRLIGPNCPGLLTPGAAKVGIIPGNIATPGPVGVVSKSGTLTYEAVDALTRLGLGQSSI 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F+DVL +F ADE T++IV++GEIGG AE +AA F+K KP+V Sbjct: 178 VGIGGDPIIGTSFVDVLAMFQADEQTKAIVLIGEIGGDAEIQAANFIKANV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG+TAP G+ MGHAGA+ISGG+G A++KI A++ G +A P I + + E+LG Sbjct: 234 AFIAGQTAPEGKRMGHAGAIISGGEGTAQEKIRALEAVGAKVARLPTDIAQLVQEVLG 291 >gi|186473505|ref|YP_001860847.1| succinyl-CoA synthetase, alpha subunit [Burkholderia phymatum STM815] gi|184195837|gb|ACC73801.1| succinyl-CoA synthetase, alpha subunit [Burkholderia phymatum STM815] Length = 278 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 180/283 (63%), Positives = 221/283 (78%), Gaps = 8/283 (2%) Query: 15 GLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANAS 74 G TG GTFH+EQA+ Y TQ+VGG+ P KG T G +PVF TVA+A T ANAS Sbjct: 3 GFTGSQGTFHSEQAVAY-GTQMVGGVTPGKGGTSHLG----LPVFDTVADAVGATGANAS 57 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILT 134 VIYVPP A DAI+E+++AE+PL+VCITEGIPV+DMVRVK L S++RLIGPNCPG++T Sbjct: 58 VIYVPPPMAADAILEAVDAELPLVVCITEGIPVIDMVRVKRALAGSATRLIGPNCPGVIT 117 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 P CKIGIMPG I R G +G++SRSGTLTYEAV QT+ GLGQ+T +GIGGDPV GT FI Sbjct: 118 PGQCKIGIMPGHIHRPGKIGVVSRSGTLTYEAVAQTTAAGLGQTTCIGIGGDPVNGTNFI 177 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM 254 D LE+FLAD+ TE ++M+GEIGGSAEE+AAQFLKD KP+VGF+AG +APPGR M Sbjct: 178 DCLEMFLADDETEGVIMIGEIGGSAEEDAAQFLKDSR---TNKPVVGFIAGTSAPPGRRM 234 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GHAGA+ISGGKG A KI+AM+ AGI +A SPA +G ++++ Sbjct: 235 GHAGAIISGGKGTAGAKIDAMRSAGIHVAQSPAALGETMLKAF 277 >gi|15839137|ref|NP_299825.1| succinyl-CoA synthetase subunit alpha [Xylella fastidiosa 9a5c] gi|9107757|gb|AAF85345.1|AE004061_10 succinyl-CoA synthetase, alpha subunit [Xylella fastidiosa 9a5c] Length = 290 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 171/297 (57%), Positives = 212/297 (71%), Gaps = 10/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG +++PVF Sbjct: 1 MSVLVNKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGNTH----IDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A+ASVIYVPP A DAI+E+ A I +IV ITEGIPVLDM+RVK L+ S Sbjct: 56 TVREAVQNTGADASVIYVPPPFAADAILEAAAAGIKVIVAITEGIPVLDMLRVKNVLKAS 115 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PEITLIGPNCPGVITPGECKIGIMPGHIHKPGHIGIVSRSGTLTYEAVKQTTDVGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G F+D L+LF D T+ I+MVGEIGG AEE A+++K KKP+ Sbjct: 176 CIGIGGDPINGLNFVDALKLFNNDPQTKGIIMVGEIGGDAEEAGAEYIKHHV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 VGF+AG +AP G+ MGHAGA+ SGG G AE K AM++AGI SP +G ++ L Sbjct: 232 VGFIAGASAPKGKRMGHAGAIASGGSGTAEGKFAAMEKAGIKTVRSPGDLGAAIASL 288 >gi|187927575|ref|YP_001898062.1| succinyl-CoA synthetase subunit alpha [Ralstonia pickettii 12J] gi|187724465|gb|ACD25630.1| succinyl-CoA synthetase, alpha subunit [Ralstonia pickettii 12J] Length = 293 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 162/301 (53%), Positives = 215/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TV +AK +T A SVIYVPP+GA DAI E++EAE+ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YATVKDAKAQTGATVSVIYVPPAGAADAIWEAVEAELDLVVCITEGIPVRDMMMVKDKMR 116 Query: 119 K--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K S + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KAGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAYWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+E GI +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEECGIKTTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|300692430|ref|YP_003753425.1| succinate-CoA ligase (GDP-forming), alpha subunit, NAD(P)-binding [Ralstonia solanacearum PSI07] gi|299079490|emb|CBJ52166.1| Succinate-CoA ligase (GDP-forming), alpha subunit, NAD(P)-binding [Ralstonia solanacearum PSI07] Length = 293 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 160/301 (53%), Positives = 214/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK +T A SVIYVPP+GA AI E+++A++ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YASVKEAKAQTGATVSVIYVPPAGAAAAIWEAVDADLDLVVCITEGIPVRDMMEVKDKMR 116 Query: 119 K--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KQNKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAYWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+E GI +P+ +GR L L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEECGIKATKNPSEMGRLLKAL 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|207728010|ref|YP_002256404.1| succinyl-coa synthetase alpha chain protein [Ralstonia solanacearum MolK2] gi|206591254|emb|CAQ56866.1| succinyl-coa synthetase alpha chain protein [Ralstonia solanacearum MolK2] Length = 293 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 161/301 (53%), Positives = 215/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TV +AK +T A+ SVIYVPP+GA DAI E++EAE+ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YATVKDAKAQTGASVSVIYVPPAGAADAIWEAVEAELDLVVCITEGIPVRDMMMVKDKMR 116 Query: 119 K--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K S + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KVGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAHWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+ GI +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEACGIKTTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|21356559|ref|NP_650809.1| CG6255 [Drosophila melanogaster] gi|7300518|gb|AAF55672.1| CG6255 [Drosophila melanogaster] gi|19528263|gb|AAL90246.1| GH18334p [Drosophila melanogaster] gi|116811194|emb|CAL25819.1| CG6255 [Drosophila melanogaster] gi|116811198|emb|CAL25821.1| CG6255 [Drosophila melanogaster] gi|116811200|emb|CAL25822.1| CG6255 [Drosophila melanogaster] gi|116811204|emb|CAL25824.1| CG6255 [Drosophila melanogaster] gi|116811206|emb|CAL25825.1| CG6255 [Drosophila melanogaster] gi|116811208|emb|CAL25826.1| CG6255 [Drosophila melanogaster] gi|116811210|emb|CAL25827.1| CG6255 [Drosophila melanogaster] gi|116811212|emb|CAL25828.1| CG6255 [Drosophila melanogaster] gi|116811214|emb|CAL25829.1| CG6255 [Drosophila melanogaster] gi|220944184|gb|ACL84635.1| CG6255-PA [synthetic construct] gi|223966445|emb|CAR92959.1| CG6255-PA [Drosophila melanogaster] gi|223966455|emb|CAR92964.1| CG6255-PA [Drosophila melanogaster] gi|223966457|emb|CAR92965.1| CG6255-PA [Drosophila melanogaster] gi|223966459|emb|CAR92966.1| CG6255-PA [Drosophila melanogaster] gi|223966463|emb|CAR92968.1| CG6255-PA [Drosophila melanogaster] Length = 342 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 170/300 (56%), Positives = 225/300 (75%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K TKVLVQG TGK TFH+E++I Y T +VGG++PKKG T G PVF + Sbjct: 32 NLKINKATKVLVQGFTGKQATFHSEESIKY-GTNIVGGVNPKKGGTEHLGK----PVFKS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA E+ +A+VI++PP A + I +IE+EI LIV ITEGIP DMVR+ L + Sbjct: 87 VAEAVEKAKPDATVIFIPPPSAAEGICAAIESEIGLIVAITEGIPQADMVRISQMLNCQE 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++PD CKIGIMPG I ++G VGI+SRSGTLTYE+V QT+ GLGQ+ Sbjct: 147 KSRLLGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP GT FID L++FL+D+ + IVM+GEIGGSAEEEAA FLK++ KP+V Sbjct: 207 VGLGGDPFNGTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEEAADFLKEKNTGCEAKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAPPGR MGHAGA+ISGGKG A+DK+ A+++AG+ + +P +G +L+E + L Sbjct: 267 GFIAGQTAPPGRRMGHAGAIISGGKGAAKDKVAALEKAGVRMTANPCHLGSTLLEEMIRL 326 >gi|117925045|ref|YP_865662.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Magnetococcus sp. MC-1] gi|117608801|gb|ABK44256.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Magnetococcus sp. MC-1] Length = 290 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 183/298 (61%), Positives = 227/298 (76%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +DKNTKV+ QG TG GTFH+EQAI Y TQ+VGG+ P KG + G +PVF Sbjct: 1 MSIFIDKNTKVICQGFTGANGTFHSEQAIAY-GTQMVGGVTPGKGGSTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T A A+VIYVPP A DAI+E+ A++ L +CITEGIPVLDM++VK LE Sbjct: 56 TVAEAVAATGATATVIYVPPPFAADAIMEAAAADLDLAICITEGIPVLDMMKVKRYLEGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KTRLVGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVAQTTAIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FID LE F D+ TE +VM+GEIGG+AEEEAA ++K KKP+V Sbjct: 176 VGIGGDPINGTNFIDCLERFNEDDETEVVVMIGEIGGTAEEEAAAWIKAHM----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAPPG+ MGHAGA+ISGGKG A +K A++ AG+ IA SP+ IG ++ + LG Sbjct: 232 GFIAGSTAPPGKRMGHAGAIISGGKGTAAEKFAALEAAGVFIAQSPSAIGETVKKALG 289 >gi|73980931|ref|XP_532985.2| PREDICTED: similar to succinate-CoA ligase, GDP-forming, alpha subunit [Canis familiaris] Length = 333 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 175/298 (58%), Positives = 220/298 (73%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QG TGK GTFH++QA+ Y V G ++ +PVF TV Sbjct: 37 LYVDKNTKVICQGFTGKQGTFHSQQALDYGTQLVGGT-----TPGKGGKTHLGLPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE T A ASVIYVPP A AI E++EAE+PL+VCITEGIP DMVRVK +L + Sbjct: 92 KEAKEETGATASVIYVPPPFAAAAINEAVEAEVPLVVCITEGIPQQDMVRVKHKLLRQGK 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 152 TRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 212 GIGGDPFNGTDFIDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKAKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 272 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEK 329 >gi|90109572|pdb|2FPG|A Chain A, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa Synthetase In Complex With Gdp Length = 305 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 219/298 (73%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QG TGK GTFH++QA+ Y V G ++ +PVF TV Sbjct: 9 LYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGT-----TPGKGGKTHLGLPVFNTV 63 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL + Sbjct: 64 KEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGK 123 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 124 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 183 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 184 GIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVVS 243 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 244 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYKEFEK 301 >gi|114330249|ref|YP_746471.1| succinyl-CoA synthetase subunit alpha [Nitrosomonas eutropha C91] gi|114307263|gb|ABI58506.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nitrosomonas eutropha C91] Length = 291 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 161/299 (53%), Positives = 222/299 (74%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 M+IL+D++T+V+ QG+TGK G FHT Q Y + V G++PKK + G +PV Sbjct: 1 MAILIDRHTRVMTQGITGKTGQFHTRQCREYAFGRDCFVAGVNPKKAGEDFEG----IPV 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV A++ T A SVIYVPP+ A AI E++EAE+ L++CITEGIPV DM+R +AR+ Sbjct: 57 FATVEAARQTTGATVSVIYVPPAYAAAAIDEAVEAELDLVICITEGIPVRDMLRTRARMR 116 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 ++LIGPNCPG++TP KIGIMPG+I ++G +G++SRSGTLTYEAV Q S+ GLGQS Sbjct: 117 GKKTQLIGPNCPGVITPGELKIGIMPGAIHQQGRIGVVSRSGTLTYEAVAQLSELGLGQS 176 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G + ID+L+LF D+ T++++MVGEIGG+ EEE+A ++KD KKP Sbjct: 177 TCIGIGGDPINGLKHIDILKLFNEDDGTDAVLMVGEIGGTDEEESAHWVKDHM----KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VGFVAG TAPPG+ MGHAGA+I+GGKG A++KI M+ GI +A +PA +G+ L ++ Sbjct: 233 VVGFVAGMTAPPGKRMGHAGAIIAGGKGTAQEKIEVMEACGIHVARNPAEMGKLLKTVI 291 >gi|163856373|ref|YP_001630671.1| succinyl-CoA synthetase subunit alpha [Bordetella petrii DSM 12804] gi|163260101|emb|CAP42402.1| Succinyl-CoA synthase, alpha subunit [Bordetella petrii] Length = 293 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 162/301 (53%), Positives = 215/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G+HPKK + G VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCREYANGKAAFVAGVHPKKAGEDFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V +AK++T A SVIYVPP+GA AI E++EAE+ L++CITEGIPV DM+ VK R++ Sbjct: 57 FGSVQDAKDKTGATVSVIYVPPAGAAAAIWEAVEAELDLVICITEGIPVRDMLEVKNRMK 116 Query: 119 KS--SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + L+GPNCPG++TPD KIGIMPG I RKG +GI+SRSGTLTYEAV Q ++ GLG Sbjct: 117 AKNSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGIVSRSGTLTYEAVAQVTELGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + +DVL+LF D T++++M+GEIGG E AAQ+ KD K Sbjct: 177 QSSAVGIGGDPINGLKHVDVLKLFNDDPDTDAVIMIGEIGGPDEVNAAQWAKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI +P+ +G+ L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLEVMEACGIRTTRNPSEMGKLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|331000519|ref|ZP_08324191.1| succinyl-CoA synthetase, alpha subunit [Parasutterella excrementihominis YIT 11859] gi|329571483|gb|EGG53168.1| succinyl-CoA synthetase, alpha subunit [Parasutterella excrementihominis YIT 11859] Length = 298 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 168/303 (55%), Positives = 216/303 (71%), Gaps = 12/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSILV+KN++V+ QG+TGK G FHT Y VGG++PKK W G +P+ Sbjct: 1 MSILVNKNSRVITQGMTGKTGQFHTRLCRDYGFGPECFVGGVNPKKAGQEWEG----LPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV EA+ +T AN SVIYVPP+GA AI E+ +A I LIVCITEGIPV+DMV+V+ ++ Sbjct: 57 FGTVKEARAKTGANVSVIYVPPAGAAAAIQEASDAGIELIVCITEGIPVMDMVKVRDHMK 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K+ S+ L+GPNCPGI+TP +GIMP I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KTGSKSLLLGPNCPGIMTPGEINVGIMPAHIHRKGRIGVVSRSGTLTYEAVAQITALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QSTA+GIGGDP+ G + IDVL+LF D T+++VM+GEIGGS EE AA+++KD K Sbjct: 177 QSTAIGIGGDPINGLKHIDVLKLFNDDPETDAVVMIGEIGGSDEETAAEWVKDHM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAP G+ MGHAGA+ISGG G AE K+ M+ GI +P+ IG L + Sbjct: 233 KPVVGFIAGVTAPAGKRMGHAGAIISGGTGTAEGKLAVMEACGIRTTRNPSEIGSLLQSV 292 Query: 297 LGS 299 L S Sbjct: 293 LSS 295 >gi|300705082|ref|YP_003746685.1| succinate-CoA ligase (gdp-forming) subunit alpha, NAD(P)-binding [Ralstonia solanacearum CFBP2957] gi|299072746|emb|CBJ44099.1| Succinate-CoA ligase (GDP-forming), alpha subunit, NAD(P)-binding [Ralstonia solanacearum CFBP2957] Length = 293 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 161/301 (53%), Positives = 215/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TV +AK +T A+ SVIYVPP+GA DAI E++EAE+ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YATVKDAKAQTGASVSVIYVPPAGAADAIWEAVEAELDLVVCITEGIPVRDMMMVKDKMR 116 Query: 119 K--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K S + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KAGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAHWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+ GI +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEACGIKTTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|255349226|ref|ZP_05381233.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis 70] gi|255503763|ref|ZP_05382153.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis 70s] gi|255507444|ref|ZP_05383083.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis D(s)2923] gi|289525868|emb|CBJ15350.1| succinyl-CoA synthetase alpha chain [Chlamydia trachomatis Sweden2] gi|296435453|gb|ADH17631.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis E/150] gi|296439170|gb|ADH21323.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis E/11023] Length = 291 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 153/298 (51%), Positives = 211/298 (70%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M L+ K+ ++ QG+TGKAG+FHT Q + Y + VGG+ P KG + + +++P+F Sbjct: 1 MLELLSKDLPIITQGITGKAGSFHTTQCVAY-GSNFVGGVTPGKGGSQF----LDLPIFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK+ T AS+I+VPP A +AI E+ +A I LIVCITEGIP+ DM+ V + +EKS Sbjct: 56 SVLEAKQATGCRASMIFVPPPFAVEAIFEAEDAGIELIVCITEGIPIKDMLEVASLMEKS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +S LIGPNCPG++ P CKIGIMPG I G VG++SRSGTLTYEAV+Q +Q +GQS Sbjct: 116 ASSLIGPNCPGVIKPGVCKIGIMPGYIHLPGKVGVVSRSGTLTYEAVWQLTQRKIGQSVC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+ F D TE+++M+GEIGGSAEEEAA +++ + KP++ Sbjct: 176 IGIGGDPLNGTSFIDALQEFENDSQTEAVLMIGEIGGSAEEEAADWIRQHSS----KPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA+ISG G A K A+++AG+ + SPA IG ++ +L Sbjct: 232 AFIAGATAPKGKHMGHAGAIISGKSGDAFSKQEALRQAGVTVVESPALIGEAVASVLK 289 >gi|28199798|ref|NP_780112.1| succinyl-CoA synthetase subunit alpha [Xylella fastidiosa Temecula1] gi|71898262|ref|ZP_00680436.1| Succinyl-CoA ligase, alpha subunit [Xylella fastidiosa Ann-1] gi|182682550|ref|YP_001830710.1| succinyl-CoA synthetase subunit alpha [Xylella fastidiosa M23] gi|28057919|gb|AAO29761.1| succinyl-CoA synthetase, alpha subunit [Xylella fastidiosa Temecula1] gi|71732001|gb|EAO34058.1| Succinyl-CoA ligase, alpha subunit [Xylella fastidiosa Ann-1] gi|182632660|gb|ACB93436.1| succinyl-CoA synthetase, alpha subunit [Xylella fastidiosa M23] gi|307578829|gb|ADN62798.1| succinyl-CoA synthetase subunit alpha [Xylella fastidiosa subsp. fastidiosa GB514] Length = 290 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 170/295 (57%), Positives = 211/295 (71%), Gaps = 10/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG +++PVF Sbjct: 1 MSVLVNKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGNTH----IDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A+ASVIYVPP A DAI+E+ A I +IV ITEGIPVLDM+RVK L+ S Sbjct: 56 TVREAVQNTGADASVIYVPPPFAADAILEAAAAGIKVIVAITEGIPVLDMLRVKNVLKAS 115 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PEITLIGPNCPGVITPGECKIGIMPGHIHKPGHIGIVSRSGTLTYEAVKQTTDVGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G F+D L+LF D T+ I+MVGEIGG AEE A+++K KKP+ Sbjct: 176 CIGIGGDPINGLNFVDALKLFNNDPQTKGIIMVGEIGGDAEEAGAEYIKHHV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 VGF+AG +AP G+ MGHAGA+ SGG G AE K AM++AGI SP +G ++ Sbjct: 232 VGFIAGASAPKGKRMGHAGAIASGGSGTAEGKFAAMEKAGIKTVRSPGDLGAAIA 286 >gi|283955956|ref|ZP_06373446.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 1336] gi|283792616|gb|EFC31395.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 1336] Length = 289 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 154/298 (51%), Positives = 199/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y T +VGG+ P KG G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTNIVGGVTPHKGGQTHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T + CK+GIMPG IF+KG VG++S+SGTLTYEA Q Q G G STA Sbjct: 116 GMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVVQGGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D+ T++IVM+GEIGGS E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFQKDDETKAIVMIGEIGGSLEVEAAKFIKENIS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++LG Sbjct: 232 AFIAGATAPKGKRMGHAGAIVGSADESAVAKKEALKSYGIHVVDSPALIGEEIQKILG 289 >gi|303256572|ref|ZP_07342586.1| succinyl-CoA synthetase, alpha subunit [Burkholderiales bacterium 1_1_47] gi|302860063|gb|EFL83140.1| succinyl-CoA synthetase, alpha subunit [Burkholderiales bacterium 1_1_47] Length = 298 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 168/303 (55%), Positives = 216/303 (71%), Gaps = 12/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSILV+KN++V+ QG+TGK G FHT Y VGG++PKK W G +P+ Sbjct: 1 MSILVNKNSRVITQGMTGKTGQFHTRLCRDYGFGPECFVGGVNPKKAGQEWEG----LPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV EA+ +T AN SVIYVPP+GA AI E+ +A I LIVCITEGIPV+DMV+V+ ++ Sbjct: 57 FGTVKEARAKTGANVSVIYVPPAGAAAAIQEASDAGIELIVCITEGIPVMDMVKVRDHMK 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K+ S+ L+GPNCPGI+TP +GIMP I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KTGSKSLLLGPNCPGIMTPGEINVGIMPAHIHRKGRIGVVSRSGTLTYEAVAQITALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QSTA+GIGGDP+ G + IDVL+LF D T+++VM+GEIGGS EE AA+++KD K Sbjct: 177 QSTAIGIGGDPINGLKHIDVLKLFNDDPETDAVVMIGEIGGSDEETAAEWVKDHM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAP G+ MGHAGA+ISGG G AE K+ M+ GI +P+ IG L + Sbjct: 233 KPVVGFIAGVTAPTGKRMGHAGAIISGGTGTAEGKLAVMEACGIRTTRNPSEIGSLLQSV 292 Query: 297 LGS 299 L S Sbjct: 293 LSS 295 >gi|57238266|ref|YP_178653.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni RM1221] gi|86151870|ref|ZP_01070084.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|86153373|ref|ZP_01071577.1| succinyl-CoA synthetase alpha chain [Campylobacter jejuni subsp. jejuni HB93-13] gi|88596905|ref|ZP_01100141.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|121613423|ref|YP_001000234.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|157414815|ref|YP_001482071.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 81116] gi|167005190|ref|ZP_02270948.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|283954178|ref|ZP_06371703.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 414] gi|315124058|ref|YP_004066062.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|57167070|gb|AAW35849.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni RM1221] gi|85841499|gb|EAQ58747.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|85843099|gb|EAQ60310.1| succinyl-CoA synthetase alpha chain [Campylobacter jejuni subsp. jejuni HB93-13] gi|87250024|gb|EAQ72982.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|88190594|gb|EAQ94567.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|157385779|gb|ABV52094.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 81116] gi|283794457|gb|EFC33201.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni 414] gi|307747453|gb|ADN90723.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Campylobacter jejuni subsp. jejuni M1] gi|315017780|gb|ADT65873.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315057952|gb|ADT72281.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Campylobacter jejuni subsp. jejuni S3] gi|315927032|gb|EFV06387.1| Succinyl-CoA synthetase subunit alpha [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929567|gb|EFV08755.1| Succinyl-CoA ligase subunit alpha [Campylobacter jejuni subsp. jejuni 305] gi|315931728|gb|EFV10683.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Campylobacter jejuni subsp. jejuni 327] Length = 289 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 154/298 (51%), Positives = 199/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y T +VGG+ P KG G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTNIVGGVTPHKGGQTHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T + CK+GIMPG IF+KG VG++S+SGTLTYEA Q Q G G STA Sbjct: 116 GMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVVQGGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D+ T++IVM+GEIGGS E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFQKDDETKAIVMIGEIGGSLEVEAAKFIKENIS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++LG Sbjct: 232 AFIAGATAPKGKRMGHAGAIVGSADESAAAKKEALKSYGIHVVDSPALIGEEIQKILG 289 >gi|83746093|ref|ZP_00943148.1| Succinyl-CoA synthetase alpha chain [Ralstonia solanacearum UW551] gi|207742411|ref|YP_002258803.1| succinyl-coa synthetase alpha chain protein [Ralstonia solanacearum IPO1609] gi|83727276|gb|EAP74399.1| Succinyl-CoA synthetase alpha chain [Ralstonia solanacearum UW551] gi|206593801|emb|CAQ60728.1| succinyl-coa synthetase alpha chain protein [Ralstonia solanacearum IPO1609] Length = 293 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 161/301 (53%), Positives = 215/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TV +AK +T A+ SVIYVPP+GA DAI E++EAE+ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YATVKDAKAQTGASVSVIYVPPAGAADAIWEAVEAELDLVVCITEGIPVRDMMMVKDKMR 116 Query: 119 K--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K S + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KAGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAHWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+ GI +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEACGIKTTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|148925904|ref|ZP_01809591.1| succinyl-coA synthetase alpha chain [Campylobacter jejuni subsp. jejuni CG8486] gi|145844890|gb|EDK21994.1| succinyl-coA synthetase alpha chain [Campylobacter jejuni subsp. jejuni CG8486] gi|284925797|gb|ADC28149.1| succinyl-coA synthetase alpha chain [Campylobacter jejuni subsp. jejuni IA3902] Length = 289 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 153/298 (51%), Positives = 199/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y T +VGG+ P KG G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTNIVGGVTPHKGGQTHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T + CK+GIMPG IF+KG VG++S+SGTLTYEA Q Q G G STA Sbjct: 116 GMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVVQGGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D+ T++I+M+GEIGGS E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFQKDDETKAIIMIGEIGGSLEVEAAKFIKENIS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++LG Sbjct: 232 AFIAGATAPKGKRMGHAGAIVGSADESAAAKKEALKSYGIHVVDSPALIGEEIQKILG 289 >gi|86148932|ref|ZP_01067164.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|85840290|gb|EAQ57547.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. jejuni CF93-6] Length = 289 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 155/298 (52%), Positives = 200/298 (67%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y T +VGG+ P KG G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTNIVGGVTPHKGGQTHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+AS+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVADAVKATKADASLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T + CK+GIMPG IF+KG VG++S+SGTLTYEA Q Q G G STA Sbjct: 116 GMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVVQGGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D+ T++IVM+GEIGGS E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFQKDDETKAIVMIGEIGGSLEVEAAKFIKENIS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++LG Sbjct: 232 AFIAGATAPKGKRMGHAGAIVGSADESAAAKKEALKSYGIHVVDSPALIGEEIQKILG 289 >gi|321261563|ref|XP_003195501.1| succinyl-coa ligase alpha-chain, mitochondrial precursor [Cryptococcus gattii WM276] gi|317461974|gb|ADV23714.1| Succinyl-coa ligase alpha-chain, mitochondrial precursor, putative [Cryptococcus gattii WM276] Length = 333 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 174/300 (58%), Positives = 220/300 (73%), Gaps = 8/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +IL++KNTKVLVQG TGK GTFH +QAI Y T+++GG +PKK G +PVF T Sbjct: 36 NILINKNTKVLVQGFTGKTGTFHAQQAIEY-GTKMIGGTNPKKAGQTHLG----LPVFGT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA +ASVIYVPP A DAIIE+IE EI LIV ITEGIP D +RV L+ +S Sbjct: 91 VREAVREAQPDASVIYVPPPFAADAIIEAIENEIKLIVTITEGIPQRDQIRVMNALKSQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR+IG NCPGI++ CK+GIMPG IF++G +G++SRSGTLTYEAV QT+ GLGQS Sbjct: 151 KSRMIGGNCPGIISEG-CKMGIMPGHIFKQGKIGVVSRSGTLTYEAVNQTTLAGLGQSLT 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK-RGRKKPI 239 VGIGGDP GT+ IDV+++ L+D TE IV++GEIGGS EEEAA +L+ K KP+ Sbjct: 210 VGIGGDPFPGTQHIDVVKVLLSDPRTEGIVLIGEIGGSMEEEAAAYLEQHNKNSANPKPV 269 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V F+AG+TAPPGR MGHAGA+ISGGKG A DK+ A+++AG IA SPA+IG +++ + Sbjct: 270 VAFIAGRTAPPGRRMGHAGAIISGGKGAASDKVAALQKAGAIIAESPAQIGGLMLKAMKE 329 >gi|195400823|ref|XP_002059015.1| GJ15342 [Drosophila virilis] gi|194141667|gb|EDW58084.1| GJ15342 [Drosophila virilis] Length = 344 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 164/297 (55%), Positives = 215/297 (72%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V+K+TKV+VQG TGK TFH+E++ Y TQ+VGG+ PKKG T PVF Sbjct: 36 NLKVNKDTKVMVQGFTGKQATFHSEESKKY-GTQIVGGVSPKKGGTTHLEK----PVFKD 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + +A+VI++PP+ A + I +IE EI LIV ITEG+P +DMVR+ L + Sbjct: 91 VKEAVKELKPDATVIFIPPATAAEGICAAIENEIGLIVAITEGVPQVDMVRILEMLNCQE 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 151 KSRLLGPNCPGIIAPEQCKIGIMPGHIHKRGVVGIVSRSGTLTYEAVHQTTNVGLGQTLC 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDP GT FID L++FL D+ T++IV++GEIGG+AEE+AA++LK KP+V Sbjct: 211 IGVGGDPFNGTNFIDALKIFLPDKETKAIVLIGEIGGTAEEDAAEYLKKHNSGCESKPVV 270 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKG A DK+ A+KEAG+ IA +P IG L + Sbjct: 271 AFIAGMTAPPGRRMGHAGAIISGGKGAATDKLKALKEAGVIIALNPCHIGTLLHTEM 327 >gi|282879725|ref|ZP_06288455.1| succinate-CoA ligase, alpha subunit [Prevotella timonensis CRIS 5C-B1] gi|281306394|gb|EFA98424.1| succinate-CoA ligase, alpha subunit [Prevotella timonensis CRIS 5C-B1] Length = 288 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 140/297 (47%), Positives = 195/297 (65%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ +TK++VQG+TG+ G+FH + Y T VVGG P K G + VF Sbjct: 1 MSILINHDTKLIVQGITGRDGSFHATKMKEY-GTNVVGGTSPGKAGQEVAG----ISVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T AN SVI+VP + A DA++E+ +A I LI+CITEG+P LD+V + Sbjct: 56 TVKDAVKATGANTSVIFVPAAFAKDAMLEAADAGIQLIICITEGVPTLDVVEAYRYISDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++LIGPNCPG+++P+ +GIMP +IF+KG G++SRSGTLTY+ V + G GQSTA Sbjct: 116 GAKLIGPNCPGLISPEESMVGIMPTNIFKKGHTGVISRSGTLTYQVVADLTAAGFGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ G F D+LE+F D T+ I ++GEIGG AEE AA ++K KP+V Sbjct: 176 VGVGGDPIVGLYFQDLLEMFQNDPETDCIALIGEIGGDAEERAADYIKQHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F++G+ AP G+ MGHAGA+IS G G A +KI A + AG+ +A I L E + Sbjct: 232 AFISGREAPKGKQMGHAGAIISSGSGTAAEKIAAFEAAGVPVARETCEIPALLKERM 288 >gi|58269516|ref|XP_571914.1| succinyl-coa ligase subunit alpha [Cryptococcus neoformans var. neoformans JEC21] gi|134114083|ref|XP_774289.1| hypothetical protein CNBG2700 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256924|gb|EAL19642.1| hypothetical protein CNBG2700 [Cryptococcus neoformans var. neoformans B-3501A] gi|57228150|gb|AAW44607.1| succinyl-coa ligase alpha-chain, mitochondrial precursor, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 333 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 171/300 (57%), Positives = 219/300 (73%), Gaps = 8/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +IL++K+TKVLVQG TGK GTFH +QAI Y T+++GG +PKK G +PVF T Sbjct: 36 NILINKDTKVLVQGFTGKTGTFHAQQAIEY-GTKMIGGTNPKKAGQTHLG----LPVFGT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A +ASVIYVPP A DAIIE+IE EI LIV ITEGIP D +++ L+ +S Sbjct: 91 VRDAVREAQPDASVIYVPPPFAADAIIEAIENEIKLIVTITEGIPQRDQIKIMNVLKSQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR+IG NCPGI++ CK+GIMPG IF +G +G++SRSGTLTYEAV QT+ GLGQS Sbjct: 151 KSRMIGGNCPGIISEG-CKMGIMPGHIFTQGKIGVVSRSGTLTYEAVNQTTLAGLGQSLT 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK-RGRKKPI 239 VGIGGDP GT+ IDV+++ LAD TE IV++GEIGGS EEEAA +L+ K KP+ Sbjct: 210 VGIGGDPFPGTQHIDVVKVLLADPRTEGIVLIGEIGGSMEEEAAAYLEQHNKNSANPKPV 269 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V F+AG+TAPPGR MGHAGA+ISGGKG A DK+ A+++AG IA SPA+IG +++ + Sbjct: 270 VAFIAGRTAPPGRRMGHAGAIISGGKGAASDKVAALEKAGAIIAKSPAQIGDLMLKAMKE 329 >gi|163846286|ref|YP_001634330.1| succinyl-CoA synthetase subunit alpha [Chloroflexus aurantiacus J-10-fl] gi|222524042|ref|YP_002568512.1| succinyl-CoA synthetase subunit alpha [Chloroflexus sp. Y-400-fl] gi|163667575|gb|ABY33941.1| succinyl-CoA synthetase, alpha subunit [Chloroflexus aurantiacus J-10-fl] gi|222447921|gb|ACM52187.1| succinyl-CoA synthetase, alpha subunit [Chloroflexus sp. Y-400-fl] Length = 295 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 171/299 (57%), Positives = 214/299 (71%), Gaps = 7/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NT++LVQG+TGK G FHT Q I Y T VV G+ P +G G VPVF Sbjct: 1 MSILIDANTRLLVQGITGKEGEFHTRQMIEY-GTNVVAGVVPGRGGQKAIDGR--VPVFN 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T AN +VIYVP A DAI ES A IPLIVCITEGIP LDMV A +++ Sbjct: 58 TVAEAVAATGANTAVIYVPAPFAPDAIRESAAARIPLIVCITEGIPALDMVSTYAFVQEC 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG+LTP + K+GI+PG+I G VGI+S+SGTLTYEAV ++ G+GQST Sbjct: 118 GVRLIGPNCPGLLTPGAAKVGIIPGNIAMPGPVGIVSKSGTLTYEAVDALTRLGIGQSTI 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVL +F AD TE+IV++GEIGG+AE+EAA ++K KP+V Sbjct: 178 VGIGGDPIIGTNFIDVLSMFEADPQTEAIVLIGEIGGTAEQEAAAYIKAHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPG+ MGHAGA+ISGG+G A++KI A++ G+ +A P I + E L + Sbjct: 234 GFIAGQTAPPGKRMGHAGAIISGGEGTAQEKIAALESVGVRVARMPTDIAGLVKEALSA 292 >gi|332284599|ref|YP_004416510.1| succinyl-CoA synthetase subunit alpha [Pusillimonas sp. T7-7] gi|330428552|gb|AEC19886.1| succinyl-CoA synthetase subunit alpha [Pusillimonas sp. T7-7] Length = 293 Score = 295 bits (755), Expect = 5e-78, Method: Composition-based stats. Identities = 159/301 (52%), Positives = 210/301 (69%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G+HPKK + G VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTHMCREYANGKDAFVAGVHPKKAGENFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TV +AK T A SVIYVPP+GA AI E++EA++ L++CITEGIPV DM+ ++ R+ Sbjct: 57 FGTVKDAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLVICITEGIPVRDMLELRNRMR 116 Query: 119 K--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ GLG Sbjct: 117 DQNKKTLLLGPNCPGLITPDELKIGIMPGHISRKGRIGVVSRSGTLTYEAVAQLTELGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QSTAVGIGGDP+ G + IDVL++F D T+++VM+GEIGG E AA++ KD K Sbjct: 177 QSTAVGIGGDPINGLKHIDVLQMFNDDPDTDAVVMIGEIGGPDEVNAAEWAKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+ GI P+ +G+ L + Sbjct: 233 KPVVGFIAGVTAPAGKRMGHAGALISGGADTADAKLEIMEACGIRTTRDPSEMGKLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|9955019|pdb|1EUC|A Chain A, Crystal Structure Of Dephosphorylated Pig Heart, Gtp- Specific Succinyl-Coa Synthetase Length = 311 Score = 295 bits (755), Expect = 5e-78, Method: Composition-based stats. Identities = 174/298 (58%), Positives = 219/298 (73%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QG TGK GTFH++QA+ Y V G ++ +PVF TV Sbjct: 15 LYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGT-----TPGKGGKTHLGLPVFNTV 69 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL + Sbjct: 70 KEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGK 129 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 130 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 189 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 190 GIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVVS 249 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 250 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYKEFEK 307 >gi|116811192|emb|CAL25818.1| CG6255 [Drosophila melanogaster] gi|116811196|emb|CAL25820.1| CG6255 [Drosophila melanogaster] gi|116811202|emb|CAL25823.1| CG6255 [Drosophila melanogaster] gi|223966447|emb|CAR92960.1| CG6255-PA [Drosophila melanogaster] gi|223966449|emb|CAR92961.1| CG6255-PA [Drosophila melanogaster] gi|223966451|emb|CAR92962.1| CG6255-PA [Drosophila melanogaster] gi|223966453|emb|CAR92963.1| CG6255-PA [Drosophila melanogaster] gi|223966461|emb|CAR92967.1| CG6255-PA [Drosophila melanogaster] gi|223966465|emb|CAR92969.1| CG6255-PA [Drosophila melanogaster] gi|223966467|emb|CAR92970.1| CG6255-PA [Drosophila melanogaster] Length = 342 Score = 295 bits (755), Expect = 5e-78, Method: Composition-based stats. Identities = 170/300 (56%), Positives = 225/300 (75%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K TKVLVQG TGK TFH+E++I Y T +VGG++PKKG T G PVF + Sbjct: 32 NLKINKATKVLVQGFTGKQATFHSEESIKY-GTNIVGGVNPKKGGTEHLGK----PVFKS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA E+ +A+VI++PP A + I +IE+EI LIV ITEGIP DMVR+ L + Sbjct: 87 VAEAVEKAKPDATVIFIPPPSAAEGICAAIESEIGLIVAITEGIPQADMVRISQMLNCQE 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++PD CKIGIMPG I ++G VGI+SRSGTLTYE+V QT+ GLGQ+ Sbjct: 147 KSRLLGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP GT FID L++FL+D+ + IVM+GEIGGSAEEEAA FLK++ KP+V Sbjct: 207 VGLGGDPFNGTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEEAADFLKEKNTGCEAKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAPPGR MGHAGA+ISGGKG A+DK+ A+++AG+ + +P +G +L+E + L Sbjct: 267 GFIAGQTAPPGRRMGHAGAIISGGKGAAKDKVAALEKAGVRMTANPCHLGSTLLEEMIRL 326 >gi|195353635|ref|XP_002043309.1| GM26905 [Drosophila sechellia] gi|194127423|gb|EDW49466.1| GM26905 [Drosophila sechellia] Length = 342 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 168/300 (56%), Positives = 226/300 (75%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TK+LVQG TGK TFH+E++I Y T +VGG++PKKG T G PVF + Sbjct: 32 NLKINKSTKLLVQGFTGKQATFHSEESIKY-GTNIVGGVNPKKGGTEHLGK----PVFKS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA E+ +A+VI++PP A + I +IE+EI LIV ITEGIP DMVR+ L + Sbjct: 87 VAEAVEKAKPDATVIFIPPPSAAEGICAAIESEIGLIVAITEGIPQSDMVRISQMLNCQE 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++PD CKIGIMPG I ++G VGI+SRSGTLTYE+V QT+ GLGQ+ Sbjct: 147 KSRLLGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP GT FID L++FL+D+ + IVM+GEIGGSAEE+AA FLK++ KP+V Sbjct: 207 VGLGGDPFNGTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEDAADFLKEKNTGCEAKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAPPGR MGHAGA+ISGGKG A+DK+ A+++AG+ + +P +G +L+E + L Sbjct: 267 GFIAGQTAPPGRRMGHAGAIISGGKGAAKDKVAALEKAGVRMTANPCHLGSTLLEEMIRL 326 >gi|53718419|ref|YP_107405.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei K96243] gi|167814452|ref|ZP_02446132.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei 91] gi|167893010|ref|ZP_02480412.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei 7894] gi|167901474|ref|ZP_02488679.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei NCTC 13177] gi|167917741|ref|ZP_02504832.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei BCC215] gi|52208833|emb|CAH34772.1| succinyl-CoA ligase alpha-chain [Burkholderia pseudomallei K96243] Length = 293 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 160/301 (53%), Positives = 211/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSS--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGITVTRNPSEMGRLLKAA 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|114706298|ref|ZP_01439200.1| succinyl-CoA synthetase alpha subunit [Fulvimarina pelagi HTCC2506] gi|114538159|gb|EAU41281.1| succinyl-CoA synthetase alpha subunit [Fulvimarina pelagi HTCC2506] Length = 298 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 143/303 (47%), Positives = 204/303 (67%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+ K+TKV+VQG TGK GTFH E I Y T+VVGG+ P KG +++PVF Sbjct: 1 MAVLLTKDTKVIVQGFTGKIGTFHAEDMIRY-GTKVVGGVTPSKGGQMH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A E T A AS+++VPP A D+I+E+ +A I VCIT+GIP DM+RVK + + Sbjct: 56 TVRGAVEETGAEASIVFVPPPFAADSIMEAADAGIKFCVCITDGIPAQDMMRVKRYMRRY 115 Query: 121 ----SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 RL GPNC G+++P +GIMP +I+ +G +GI++RSGTL+YEA Q ++G+G Sbjct: 116 RQEDKMRLFGPNCAGMISPGHGFMGIMPTNIYEQGRIGIVARSGTLSYEAASQMLEKGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST++GIGGDP+ G+ F D LELF AD T+++VM+GEIGG E EAA++ A++ Sbjct: 176 VSTSIGIGGDPINGSSFKDCLELFEADPETDAVVMIGEIGGPQEAEAARW----AQKNMS 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+ ++AG +AP G+ MGHAGA++S A +KI MKE GI + P P+ G + E+ Sbjct: 232 KPVAAYIAGASAPKGKRMGHAGAIVSTEGESAAEKIEIMKECGIHVVPHPSAFGEVVEEM 291 Query: 297 LGS 299 +G+ Sbjct: 292 IGA 294 >gi|57167579|ref|ZP_00366719.1| SucD [Campylobacter coli RM2228] gi|305433085|ref|ZP_07402241.1| succinyl-CoA synthetase subunit alpha [Campylobacter coli JV20] gi|57020701|gb|EAL57365.1| SucD [Campylobacter coli RM2228] gi|304443786|gb|EFM36443.1| succinyl-CoA synthetase subunit alpha [Campylobacter coli JV20] Length = 289 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 154/298 (51%), Positives = 198/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y T +VGG+ P KG G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTNIVGGVTPHKGGQTHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVADAVKATGADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T + CK+GIMPG IF+KG VG++S+SGTLTYEA Q Q G G STA Sbjct: 116 GMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVVQGGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D T++IVM+GEIGGS E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFEKDNETKAIVMIGEIGGSLEVEAAKFIKENIS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++LG Sbjct: 232 AFIAGATAPKGKRMGHAGAIVGSADESAAAKKEALKSYGIHVVDSPALIGEEIQKILG 289 >gi|195497961|ref|XP_002096322.1| GE25125 [Drosophila yakuba] gi|194182423|gb|EDW96034.1| GE25125 [Drosophila yakuba] Length = 342 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 168/300 (56%), Positives = 225/300 (75%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K TKVLVQG TGK TFH+E++I Y T +VGG++PKKG T G PVF + Sbjct: 32 NLKINKQTKVLVQGFTGKQATFHSEESIKY-GTNIVGGVNPKKGGTEHLGK----PVFKS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA E+ +A+VI++PP A + I +IE+EI LIV ITEGIP DMVR+ L + Sbjct: 87 VAEAAEKVKPDATVIFIPPPSAAEGICSAIESEIGLIVAITEGIPQADMVRISQMLNCQE 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++P+ CKIGIMPG I ++G VGI+SRSGTLTYE+V QT+ GLGQ+ Sbjct: 147 KSRLLGPNCPGIISPEQCKIGIMPGHIHKRGMVGIVSRSGTLTYESVHQTTNVGLGQALC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDP GT F+D L++FL+D+ + IVM+GEIGGSAEEEAA FLK++ KP+V Sbjct: 207 IGLGGDPFNGTSFVDALKVFLSDKEIKGIVMIGEIGGSAEEEAADFLKEKNTGCEAKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAPPGR MGHAGA+ISGGKG A+DK+ A+++AG+ + +P +G SL+E + L Sbjct: 267 GFIAGQTAPPGRRMGHAGAIISGGKGAAKDKVAALEKAGVRMTVNPCHLGSSLLEEMIRL 326 >gi|115438324|ref|XP_001218037.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114188852|gb|EAU30552.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 331 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 169/294 (57%), Positives = 217/294 (73%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH EQAI Y T+VVGG +PKK T ++ PVF Sbjct: 36 NLRINADTKVIFQGFTGKQGTFHAEQAIAY-GTKVVGGTNPKKAGTMH----LDRPVFAN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A I E++EAEIPL VCITEGIP DMVR+ L+ ++ Sbjct: 91 VRDAVKETGATASAIFVPPPLAAKGIEEALEAEIPLAVCITEGIPQHDMVRITDMLKTQN 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+M+GEIGGSAEE+AA+F K KP V Sbjct: 211 VGIGGDPFSGTNFIDCLKIFLEDPETDGIIMIGEIGGSAEEDAAEFFKANNV--HNKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AG +APPGR MGHAGA++SGGKGGA+ KI+A+++AG+ + SPA +G++L+ Sbjct: 269 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALQDAGVVVERSPAGLGKALL 322 >gi|296809193|ref|XP_002844935.1| succinyl-CoA ligase subunit alpha [Arthroderma otae CBS 113480] gi|238844418|gb|EEQ34080.1| succinyl-CoA ligase subunit alpha [Arthroderma otae CBS 113480] Length = 330 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 174/294 (59%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T VVGG +PKK G PVF + Sbjct: 35 NLRINADTKVIFQGFTGKQGTFHAQQAIDY-GTNVVGGTNPKKAGETHLGK----PVFAS 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + T A AS I+VPPS A +I ESI AE+PL+VCITEGIP DMVR+ L+ +S Sbjct: 90 VAEAVKETGATASAIFVPPSVAAKSIEESIAAEVPLVVCITEGIPQHDMVRITDMLKTQS 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 150 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA FLK E + KP V Sbjct: 210 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAAFLKSENRA--NKPAV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AG +APPGR MGHAGA++SGGKGGA+ KI A+++AG+ + SPA +G++L+ Sbjct: 268 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALQDAGVIVERSPASLGKTLL 321 >gi|169624256|ref|XP_001805534.1| hypothetical protein SNOG_15384 [Phaeosphaeria nodorum SN15] gi|111056197|gb|EAT77317.1| hypothetical protein SNOG_15384 [Phaeosphaeria nodorum SN15] Length = 328 Score = 295 bits (754), Expect = 6e-78, Method: Composition-based stats. Identities = 172/297 (57%), Positives = 218/297 (73%), Gaps = 8/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKVL QG TGK GTFH +QAI Y T+VVGG +PKK + G PVF + Sbjct: 33 NLRINGDTKVLFQGFTGKQGTFHAQQAIEY-GTKVVGGTNPKKAGSEHLGK----PVFAS 87 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VA+A + T A AS I+VPP A +I E+I AE+PLIV ITEGIP DMVR+ L+ ++ Sbjct: 88 VADAIKETGATASAIFVPPPVAAKSIEEAIAAEVPLIVTITEGIPQHDMVRITDMLKSQN 147 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR++GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 148 KSRMVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 207 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA FLK+ KP+V Sbjct: 208 VGIGGDPFSGTNFIDCLKVFLQDEETDGIIMIGEIGGSAEEDAADFLKEYNTA--NKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APPGR MGHAGA++SGGKG A KINA++ AG+ + SPAR+G +L + Sbjct: 266 SFIAGISAPPGRRMGHAGAIVSGGKGDANSKINALEAAGVVVERSPARLGSTLYDQF 322 >gi|71006306|ref|XP_757819.1| hypothetical protein UM01672.1 [Ustilago maydis 521] gi|46097056|gb|EAK82289.1| hypothetical protein UM01672.1 [Ustilago maydis 521] Length = 330 Score = 295 bits (754), Expect = 6e-78, Method: Composition-based stats. Identities = 169/300 (56%), Positives = 222/300 (74%), Gaps = 7/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L++K+++V+ QG TGK GTFH +QA+ Y T++VGG+ PKK G +PVF + Sbjct: 32 NLLINKDSRVICQGFTGKTGTFHCQQALEY-GTKLVGGVSPKKAGQTHLG----LPVFGS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA T +ASV+YVPP GA DAIIE+IE E+PLIV ITEGIP D +RV A L +S Sbjct: 87 VKEAVRETKPHASVLYVPPPGAADAIIEAIENEVPLIVAITEGIPQKDEIRVAAALRSQS 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 147 KSRLVGPNCPGIINPEGCKIGIMPGHIHTPGRIGIVSRSGTLTYEAVNQTTQVGLGQSLC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL-KDEAKRGRKKPI 239 VGIGGDP G+ +D+++L L + +E IV++GEIGGS EE+AA++L K R KP+ Sbjct: 207 VGIGGDPFPGSTTLDLVKLLLDHDKSEGIVLIGEIGGSMEEDAAEYLAKYNKTRANPKPV 266 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V F+AG+TAPPGR MGHAGA+I+GGKGGA+DK+ A+ EAG +A SPA+IG + + + + Sbjct: 267 VAFIAGRTAPPGRRMGHAGAIIAGGKGGADDKVKALTEAGAIVADSPAKIGALMKQAMQN 326 >gi|315638489|ref|ZP_07893666.1| succinyl-CoA synthetase subunit alpha [Campylobacter upsaliensis JV21] gi|315481480|gb|EFU72107.1| succinyl-CoA synthetase subunit alpha [Campylobacter upsaliensis JV21] Length = 289 Score = 295 bits (754), Expect = 7e-78, Method: Composition-based stats. Identities = 155/298 (52%), Positives = 199/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y TQ+VGG+ P KG T G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTQIVGGVTPFKGGTEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA + T A+ S+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVSEAVKATGADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T CK+GIMPG IF+KG VG++S+SGTLTYEA Q +Q G G STA Sbjct: 116 GMKIIGPNCPGIITSQECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVAQSGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D T++IVM+GEIGGS E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFEKDAETKAIVMIGEIGGSLEVEAAKFIKENI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++L Sbjct: 232 AFIAGATAPKGKRMGHAGAIVGSSDESAAAKKEALKSYGIHVVDSPALIGEEIKKILA 289 >gi|269128415|ref|YP_003301785.1| succinyl-CoA synthetase subunit alpha [Thermomonospora curvata DSM 43183] gi|268313373|gb|ACY99747.1| succinyl-CoA synthetase, alpha subunit [Thermomonospora curvata DSM 43183] Length = 295 Score = 295 bits (754), Expect = 7e-78, Method: Composition-based stats. Identities = 139/302 (46%), Positives = 197/302 (65%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + +N+KV+VQG+TG G+ HT + +L T VVGG++ +K +PVF Sbjct: 1 MAIWLTENSKVIVQGMTGSEGSKHTAR-MLRAGTNVVGGVNARKAGQTVDFDGKELPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+T A+ SV++VPP A DA++E+I+A I L V ITEGIPV D A + Sbjct: 60 TVAEAMEKTGADTSVVFVPPKFAKDAVVEAIDAGIGLAVVITEGIPVHDTAYFWAYACEK 119 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPGI +P GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNATRIIGPNCPGIASPGKSNAGIIPADITSPGRIGLVSKSGTLTYQLMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV GT ID L+ F D T++IVM+GEIGG AEE AA +++ KP Sbjct: 178 TCVGIGGDPVIGTTHIDALQAFQDDPETDAIVMIGEIGGDAEERAAAYIEQHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G AE K A+++ G+ + +P+ R + E++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAEAKKEALEKVGVRVGKTPSETARIMREVMQ 293 Query: 299 SL 300 +L Sbjct: 294 NL 295 >gi|312797175|ref|YP_004030097.1| succinyl-CoA synthetase alpha chain [Burkholderia rhizoxinica HKI 454] gi|312168950|emb|CBW75953.1| Succinyl-CoA synthetase alpha chain (EC 6.2.1.5) [Burkholderia rhizoxinica HKI 454] Length = 313 Score = 295 bits (754), Expect = 8e-78, Method: Composition-based stats. Identities = 156/301 (51%), Positives = 213/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 21 MSILINKDTKVITQGITGKTGQFHTRACREYANGRAAYVAGVNPKKAGEDFEG----IPI 76 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V EAK +T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ R+ Sbjct: 77 FGSVKEAKAQTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVRDRMR 136 Query: 119 KS--SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q + GLG Sbjct: 137 RENRKTLLLGPNCPGVITPDELKIGIMPGHIHKKGRIGVVSRSGTLTYEAVAQLTALGLG 196 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T++++M+GEIGG E A+ ++KD K Sbjct: 197 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVIMIGEIGGPDEANASYWIKDNM----K 252 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L + Sbjct: 253 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMESCGIKVTKNPSEMGRLLKSV 312 Query: 297 L 297 L Sbjct: 313 L 313 >gi|254468446|ref|ZP_05081852.1| succinyl-CoA ligase, alpha subunit [beta proteobacterium KB13] gi|207087256|gb|EDZ64539.1| succinyl-CoA ligase, alpha subunit [beta proteobacterium KB13] Length = 291 Score = 295 bits (754), Expect = 8e-78, Method: Composition-based stats. Identities = 161/299 (53%), Positives = 208/299 (69%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVD T+++ QG TGK GTFH+EQ + Y V G G ++ +PVF Sbjct: 1 MSVLVDSKTRLICQGFTGKQGTFHSEQCLNYGTNLVGGV-----TPGKGGGKHLKLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T ANA++IYVPP+ A D+IIE+ EA I +IVCITEGIP DM++VK+ + + Sbjct: 56 TVKEAVNQTQANATMIYVPPAFAADSIIEASEAGIEIIVCITEGIPTFDMLKVKSIINSN 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPGI+TP CKIGIMPGSI G +GI+SRSGTLTYEAV QT+ LGQST Sbjct: 116 RSILIGPNCPGIITPGECKIGIMPGSIHLPGKIGIVSRSGTLTYEAVNQTTNNKLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+KG FI+ L+ F D T I++VGEIGGS EEEAA ++K+ KP+ Sbjct: 176 IGIGGDPIKGLNFIECLDFFENDPDTHGIILVGEIGGSDEEEAADYIKE----KITKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AG TAP G+ MGHAGA+IS G A DKINA+++AG IA SPA IG +++ + + Sbjct: 232 SYIAGMTAPEGKRMGHAGAIISKTSGKAIDKINALRKAGAVIANSPAEIGDAILLAMNN 290 >gi|205355390|ref|ZP_03222161.1| succinyl-CoA synthetase alpha chain [Campylobacter jejuni subsp. jejuni CG8421] gi|205346624|gb|EDZ33256.1| succinyl-CoA synthetase alpha chain [Campylobacter jejuni subsp. jejuni CG8421] Length = 289 Score = 295 bits (754), Expect = 8e-78, Method: Composition-based stats. Identities = 154/298 (51%), Positives = 199/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y T +VGG+ P KG G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTNIVGGVTPHKGGQTHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T + CK+GIMPG IF+KG VG++S+SGTLTYEA Q Q G G STA Sbjct: 116 GMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVVQGGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D+ T++IVM+GEIGGS E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFQKDDETKAIVMIGEIGGSLEVEAAKFIKENIS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++LG Sbjct: 232 AFIAGATAPKGKKMGHAGAIVGSADESAAAKKEALKSYGIHVVDSPALIGEEIQKILG 289 >gi|311105072|ref|YP_003977925.1| succinyl-CoA ligase [Achromobacter xylosoxidans A8] gi|310759761|gb|ADP15210.1| succinyl-CoA ligase [Achromobacter xylosoxidans A8] Length = 293 Score = 295 bits (754), Expect = 8e-78, Method: Composition-based stats. Identities = 160/301 (53%), Positives = 214/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCREYANGKAAFVAGVNPKKAGEDFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V +AK T A SVIYVPP+GA AI E++EAE+ L++CITEGIPV DM+ VK R++ Sbjct: 57 FASVKDAKADTGATVSVIYVPPAGAAAAIWEAVEAELDLVICITEGIPVRDMLEVKNRMK 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S+ L+GPNCPG++TPD KIGIMPG I RKG +GI+SRSGTLTYEAV Q ++ GLG Sbjct: 117 AKGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGIVSRSGTLTYEAVAQVTELGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + +DVL++F D T++++M+GEIGG E AA++ KD K Sbjct: 177 QSSAVGIGGDPINGLKHVDVLKMFNDDPDTDAVIMIGEIGGPDEVNAAEWAKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI +P+ +G+ L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLEVMEACGIRTTRNPSEMGKLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|86138988|ref|ZP_01057559.1| succinyl-CoA synthase, alpha subunit [Roseobacter sp. MED193] gi|85824219|gb|EAQ44423.1| succinyl-CoA synthase, alpha subunit [Roseobacter sp. MED193] Length = 294 Score = 295 bits (754), Expect = 8e-78, Method: Composition-based stats. Identities = 196/298 (65%), Positives = 248/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG ++N+PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQ----SHLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM++V+ LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVQRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQS+A Sbjct: 116 KSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDIGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVL+LFL D+ TESI+M+GEIGGSAEEEAA+FL ++ K+GR KP+ Sbjct: 176 VGIGGDPIKGTEHIDVLDLFLDDDETESIIMIGEIGGSAEEEAAEFLAEQKKKGRWKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AM+ AGI +A SPA +G ++++ + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMRSAGIVVAESPAGLGEAVLKAIK 293 >gi|299067883|emb|CBJ39096.1| Succinate-CoA ligase (GDP-forming), alpha subunit, NAD(P)-binding [Ralstonia solanacearum CMR15] Length = 293 Score = 294 bits (753), Expect = 9e-78, Method: Composition-based stats. Identities = 160/301 (53%), Positives = 214/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRGCRDYANGKNAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +AK +T A SVIYVPP+GA DAI E++EAE+ L+VCITEGIPV DM+ VK ++ Sbjct: 57 YASVKDAKAQTGATVSVIYVPPAGAADAIWEAVEAELDLVVCITEGIPVRDMMMVKDKMR 116 Query: 119 K--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K S + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KAGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEANAAHWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+ GI +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEACGIKTTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|218562186|ref|YP_002343965.1| succinyl-coA synthetase alpha chain [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|112359892|emb|CAL34680.1| succinyl-coA synthetase alpha chain [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 289 Score = 294 bits (753), Expect = 9e-78, Method: Composition-based stats. Identities = 155/298 (52%), Positives = 199/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y T +VGGI P KG G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTNIVGGITPHKGGQTHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T + CK+GIMPG IF+KG VG++S+SGTLTYEA Q Q G G STA Sbjct: 116 GMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVVQGGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D+ T++IVM+GEIGGS E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFQKDDETKAIVMIGEIGGSLEVEAAKFIKENIS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++LG Sbjct: 232 AFIAGATAPKGKRMGHAGAIVGSADESAAAKKEALKSYGIHVVDSPALIGEEIQKILG 289 >gi|116811216|emb|CAL25830.1| CG6255 [Drosophila simulans] Length = 342 Score = 294 bits (753), Expect = 9e-78, Method: Composition-based stats. Identities = 168/300 (56%), Positives = 226/300 (75%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TK+LVQG TGK TFH+E++I Y T +VGG++PKKG T G PVF + Sbjct: 32 NLKINKSTKLLVQGFTGKQATFHSEESIKY-GTNIVGGVNPKKGGTEHLGK----PVFKS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA E+ +A+VI++PP A + I +IE+EI LIV ITEGIP DMVR+ L + Sbjct: 87 VAEAVEKAKPDATVIFIPPPSAAEGICAAIESEIGLIVAITEGIPQSDMVRISQMLNCQE 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++PD CKIGIMPG I ++G VGI+SRSGTLTYE+V QT+ GLGQ+ Sbjct: 147 KSRLLGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP GT FID L++FL+D+ + IVM+GEIGGSAEE+AA FLK++ KP+V Sbjct: 207 VGLGGDPFNGTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEDAADFLKEKNTGCEAKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAPPGR MGHAGA+ISGGKG A+DK+ A+++AG+ + +P +G +L+E + L Sbjct: 267 GFIAGQTAPPGRRMGHAGAIISGGKGAAKDKVAALEKAGVRMTANPCHLGSTLLEEMIRL 326 >gi|293604312|ref|ZP_06686719.1| succinyl-CoA synthetase subunit alpha [Achromobacter piechaudii ATCC 43553] gi|292817189|gb|EFF76263.1| succinyl-CoA synthetase subunit alpha [Achromobacter piechaudii ATCC 43553] Length = 293 Score = 294 bits (753), Expect = 9e-78, Method: Composition-based stats. Identities = 161/301 (53%), Positives = 214/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCREYANGKAAFVAGVNPKKAGEDFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V EAK T A SVIYVPP+GA AI E++EAE+ L++CITEGIPV DM+ VK R++ Sbjct: 57 FASVKEAKADTGATVSVIYVPPAGAAAAIWEAVEAELDLVICITEGIPVRDMLEVKNRMK 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S+ L+GPNCPG++TPD KIGIMPG I RKG +GI+SRSGTLTYEAV Q ++ GLG Sbjct: 117 AKGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGIVSRSGTLTYEAVAQVTELGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + +DVL++F D T++++M+GEIGG E AA++ KD K Sbjct: 177 QSSAVGIGGDPINGLKHVDVLKMFNDDPDTDAVIMIGEIGGPDEVNAAEWAKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI +P+ +G+ L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLEVMEACGIRTTRNPSEMGKLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|13471374|ref|NP_102940.1| succinyl-CoA synthetase subunit alpha [Mesorhizobium loti MAFF303099] gi|14022116|dbj|BAB48726.1| succinyl-CoA synthetase alpha subunit [Mesorhizobium loti MAFF303099] Length = 299 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 143/304 (47%), Positives = 202/304 (66%), Gaps = 13/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++++T+V+VQG TGK G+FH E Y T++VGG+ P KG G +PVF Sbjct: 1 MAILLNRSTRVIVQGFTGKIGSFHAEDMKRY-GTKLVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A T A AS+++VPP A D+I+E+ +A I L VCIT+GIP DM++VK + + Sbjct: 56 TVKGAVRETRAEASIVFVPPPFAADSIMEAADAGIKLCVCITDGIPSQDMMQVKRYMRRY 115 Query: 121 S----SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 RLIGPNC G++TP +GIMPGSI+ G VGI+ RSGTL YEA Q G+G Sbjct: 116 RFEDRMRLIGPNCAGMITPGQALMGIMPGSIYLPGRVGIVGRSGTLGYEAASQMKALGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+L+LF D+ T+++VM+GEIGG E EAA + +D + Sbjct: 176 VSTSVGIGGDPINGSSFKDILKLFEQDDETDAVVMIGEIGGPQEAEAAIWARDNMR---- 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ ++AG +AP GR MGHAGA+IS A++K+ +KEAG+ I P+P+ G + + Sbjct: 232 KPLIAYIAGLSAPKGRRMGHAGAIISAFGESAQEKVEILKEAGVIIVPTPSSFGEVVADT 291 Query: 297 LGSL 300 L + Sbjct: 292 LARM 295 >gi|260459593|ref|ZP_05807847.1| succinyl-CoA synthetase, alpha subunit [Mesorhizobium opportunistum WSM2075] gi|259034395|gb|EEW35652.1| succinyl-CoA synthetase, alpha subunit [Mesorhizobium opportunistum WSM2075] Length = 299 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 140/304 (46%), Positives = 202/304 (66%), Gaps = 13/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL++++T+V+VQG TGK G+FH E Y T++VGG+ P KG G +PVF Sbjct: 1 MAILLNRSTRVIVQGFTGKIGSFHAEDMKRY-GTKLVGGVTPGKGGQKHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A T A AS+++VPP A D+I+E+ +A I L VCIT+GIP DM++VK + + Sbjct: 56 TVKGAVRETRAEASIVFVPPPFAADSIMEAADAGIKLCVCITDGIPSQDMMQVKRYMRRY 115 Query: 121 S----SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 RL+GPNC G++TP +GIMPG+I+ G +GI+ RSGTL YEA Q G+G Sbjct: 116 RFEDRMRLVGPNCAGVITPGQALMGIMPGNIYLPGRIGIVGRSGTLGYEAASQMKALGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+L+LF D+ T+++VM+GEIGG E EAA + +D + Sbjct: 176 VSTSVGIGGDPINGSSFKDILKLFEQDDETDAVVMIGEIGGPQEAEAAIWARDNMR---- 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ ++AG +AP GR MGHAGA+IS A++K+ +KEAG+ I P+P+ G + + Sbjct: 232 KPLIAYIAGLSAPKGRRMGHAGAIISAFGESAQEKVEILKEAGVIIVPTPSSFGEVVADT 291 Query: 297 LGSL 300 L + Sbjct: 292 LARM 295 >gi|254457951|ref|ZP_05071378.1| succinyl-CoA ligase, alpha subunit [Campylobacterales bacterium GD 1] gi|207085344|gb|EDZ62629.1| succinyl-CoA ligase, alpha subunit [Campylobacterales bacterium GD 1] Length = 290 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 158/299 (52%), Positives = 209/299 (69%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+TKV+VQG TGK GTFH EQ + Y T++VGG+ P KG G PVF Sbjct: 1 MSILVNKDTKVIVQGFTGKEGTFHAEQCLAY-GTKIVGGVTPNKGGQEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A S+I+VPP+ GDA++E+ EA I L V ITEG PV DM KA K Sbjct: 56 TVKDAVSSTGATVSMIFVPPAFVGDAVMEAAEAGITLAVIITEGAPVKDMQAAKAHATKH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 IGPNCPGI+T + CKIGIMPGSIF+KG+VG++S+SGTLTYE Q EG G +TA Sbjct: 116 GMMTIGPNCPGIITAEECKIGIMPGSIFKKGNVGLISKSGTLTYEGANQVCNEGFGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G ++ +L +F AD T +IVM+GEIGG E +AA+ +K++ KP+V Sbjct: 176 VGIGGDPIIGLSYLQILPMFEADPDTHAIVMIGEIGGDLEIQAAKLIKEQI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP G+TMGHAGA++SG G A++K+ A++ AG+ + SPA IG+++ E+L Sbjct: 232 AFIAGQTAPKGKTMGHAGAIVSGSAGTAKEKMEALEAAGVRVVVSPAEIGKAIAEVLAK 290 >gi|51244138|ref|YP_064022.1| succinyl-CoA synthetase, alpha chain [Desulfotalea psychrophila LSv54] gi|50875175|emb|CAG35015.1| probable succinyl-CoA synthetase, alpha chain [Desulfotalea psychrophila LSv54] Length = 294 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 168/298 (56%), Positives = 216/298 (72%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI V+ T++LVQG+TG+ G FHT Q I Y TQVV G+ P KG ++P++ Sbjct: 1 MSIFVNSKTRLLVQGITGQEGQFHTRQCINY-GTQVVAGVTPGKGGQMMD----SIPIYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA++ +AANAS+I VPP A DAI+E+ +A I LI+CITEGIP++DM+RVK L + Sbjct: 56 TVREARQISAANASMIMVPPPFAADAILEAADAGIELIICITEGIPIIDMLRVKNYLATT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS-VGILSRSGTLTYEAVFQTSQEGLGQST 179 +SRLIGPNCPGI+TP CKIGIMP I G +G++SRSGTLTYE V Q + GLGQ+T Sbjct: 116 TSRLIGPNCPGIITPGECKIGIMPAKIHTPGGPMGVVSRSGTLTYEVVHQLTGVGLGQTT 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT FID L+ F AD TE++VMVGEIGG AEEEAA ++K KKP+ Sbjct: 176 CVGIGGDPINGTGFIDCLKAFNADAETEAVVMVGEIGGQAEEEAAAWVKAHM----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +GF+AG TAPPGR MGHAGA++SGG+G A KI AM++AGI I+ + +G ++L Sbjct: 232 IGFIAGLTAPPGRRMGHAGAIVSGGQGAAATKIMAMRDAGIHISENLGTLGMLARQVL 289 >gi|187478793|ref|YP_786817.1| succinyl-CoA synthetase subunit alpha [Bordetella avium 197N] gi|115423379|emb|CAJ49913.1| succinyl-CoA synthetase alpha chain [Bordetella avium 197N] Length = 293 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 160/301 (53%), Positives = 215/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCRDYANGKAAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +AK+ T A SVIYVPP+GA AI E++EAE+ L+VCITEGIPV DM+ VK R+ Sbjct: 57 YASVKDAKDDTGATVSVIYVPPAGAAAAIWEAVEAELALVVCITEGIPVRDMLEVKNRMR 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + S+ L+GPNCPG++TPD KIGIMPG I RKG +GI+SRSGTLTYEAV Q ++ GLG Sbjct: 117 EKGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGIVSRSGTLTYEAVAQVTELGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + +DVL+LF D T++++M+GEIGG E AA++ KD K Sbjct: 177 QSSAVGIGGDPINGLKHVDVLKLFNDDPETDAVIMIGEIGGPDEVAAAEWAKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI +P+ +G+ L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLEVMEACGIKTTRNPSEMGKLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|53724722|ref|YP_102102.1| succinyl-CoA synthetase subunit alpha [Burkholderia mallei ATCC 23344] gi|166998882|ref|ZP_02264734.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei PRL-20] gi|167718280|ref|ZP_02401516.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei DM98] gi|167737328|ref|ZP_02410102.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei 14] gi|167822917|ref|ZP_02454388.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei 9] gi|167844484|ref|ZP_02469992.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei B7210] gi|167909718|ref|ZP_02496809.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei 112] gi|52428145|gb|AAU48738.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei ATCC 23344] gi|243064962|gb|EES47148.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei PRL-20] Length = 293 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 160/301 (53%), Positives = 211/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGDNFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSS--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGITVTRNPSEMGRLLKAA 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|317122102|ref|YP_004102105.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Thermaerobacter marianensis DSM 12885] gi|315592082|gb|ADU51378.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Thermaerobacter marianensis DSM 12885] Length = 288 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 139/297 (46%), Positives = 197/297 (66%), Gaps = 10/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+D+ T+V+VQG+TG G+FHT Q I Y T+VV G+ P K G VPV+ Sbjct: 1 MAILIDERTRVVVQGITGHQGSFHTGQMIDY-GTRVVAGVSPGKEGQEVRG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A E+ A AS+I+VP DA++E+++A I L+V ITE +P+ D + + AR Sbjct: 56 TVEAAVEKHGATASIIFVPAPFTKDAVLEALDAGIKLVVVITEHVPLHDAMEIMARARLK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + +IGPN G+++P KIGIMP I+ G VGI++RSGTL+YE + G GQST Sbjct: 116 GATIIGPNTFGVISPGKSKIGIMPNQIYTPGRVGIVARSGTLSYEIAASLTHAGFGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGD V G FIDVL++F D+ TE++V+VGEIGG+AEEEAA+++K G KP+V Sbjct: 176 VGMGGDRVVGLSFIDVLKMFEQDKETEAVVLVGEIGGTAEEEAAEYIK-----GMSKPVV 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AGK APPG+ MGHAGA+I G+G + K+ A++ AG +A P ++ + E L Sbjct: 231 AYLAGKHAPPGKRMGHAGAIIERGRGTYQSKVEALEAAGARVAALPWQVAELVREAL 287 >gi|170085075|ref|XP_001873761.1| succinyl-CoA-ligase [Laccaria bicolor S238N-H82] gi|164651313|gb|EDR15553.1| succinyl-CoA-ligase [Laccaria bicolor S238N-H82] Length = 330 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 165/300 (55%), Positives = 220/300 (73%), Gaps = 7/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++++ K+TKVL QGLTGK TFH +A+ Y T +VGG+ PKK G +PVF + Sbjct: 32 NLMIHKDTKVLCQGLTGKTATFHITEALAY-GTNMVGGVSPKKAGQTHLG----LPVFGS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA T +A+++YVPP A DAIIE+IE EI LIVC+TEGIP D +RV L+ +S Sbjct: 87 VREAVRETKPDATILYVPPPTAADAIIEAIENEIGLIVCVTEGIPQADEIRVMNALKSQS 146 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPG++ P CK+GI PG I G++GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 147 RSRLVGPNCPGVINPLGCKMGIQPGHIHTPGNIGIVSRSGTLTYEAVAQTTDVGLGQSLC 206 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK-RGRKKPI 239 VGIGGDP GT+ +DV+++FL D T+ IV++GEIGGS EEEAA++L+ K R KP+ Sbjct: 207 VGIGGDPFPGTQHVDVIKVFLEDPNTKGIVIIGEIGGSMEEEAAEYLERHNKTRSHPKPV 266 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VGF+AG+TAPPGR MGHAGA+ISGGKG A DK+ A+++AG+ + SPA+IG +++ + + Sbjct: 267 VGFIAGRTAPPGRRMGHAGAIISGGKGAASDKVKALEKAGVIVTDSPAKIGVEILKAMKA 326 >gi|121712676|ref|XP_001273949.1| succinyl-CoA synthetase alpha subunit, putative [Aspergillus clavatus NRRL 1] gi|119402102|gb|EAW12523.1| succinyl-CoA synthetase alpha subunit, putative [Aspergillus clavatus NRRL 1] Length = 331 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 172/294 (58%), Positives = 218/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKVL QG TGK GTFH EQAI Y T+VVGG +PKK T ++ PVF Sbjct: 36 NLRINGDTKVLFQGFTGKQGTFHAEQAIAY-GTKVVGGTNPKKAGTMH----LDRPVFAN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A I E+IEAE+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 91 VRDAIKETGATASAIFVPPPLAAAGIEEAIEAEMPLVVCITEGIPQHDMVRITDILKTQN 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL D+ T+ I+M+GEIGGSAEE+AA+F K K KP V Sbjct: 211 VGIGGDPFSGTNFIDCLRIFLEDKETDGIIMIGEIGGSAEEDAAEFFKANNK--YNKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L+ Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALESAGVTVERSPAHLGKTLL 322 >gi|330813454|ref|YP_004357693.1| succinyl-CoA ligase [ADP-forming] alpha chain [Candidatus Pelagibacter sp. IMCC9063] gi|327486549|gb|AEA80954.1| succinyl-CoA ligase [ADP-forming] alpha chain [Candidatus Pelagibacter sp. IMCC9063] Length = 291 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 192/297 (64%), Positives = 228/297 (76%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T +VGG+ P KG G PVF Sbjct: 1 MSVLINKDTKVICQGFTGTHGTFHSEQAIEY-GTNLVGGVTPNKGGQTHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A+A++IYVP A AIIE+IE E+PLI CITEGIP+LDM++VK +L+ S Sbjct: 56 TVEEAVNQTKADATMIYVPAKFAAAAIIEAIECEMPLIACITEGIPILDMIKVKEKLKGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP+ CKIGIMPG I +KGSVGI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRLIGPNCPGIITPEECKIGIMPGHIHKKGSVGIVSRSGTLTYEAVAQTTAIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV GT FID LELFL DE TESI+M+GEIGG EE+AAQF+KD KKP V Sbjct: 176 IGIGGDPVNGTNFIDCLELFLNDEKTESIIMIGEIGGDDEEQAAQFIKDSKI---KKPTV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPGR MGHAGA+I+GGKGGA+DKI MK GI + SPA IG++L L Sbjct: 233 GFIAGLTAPPGRRMGHAGAIIAGGKGGAQDKIEKMKSCGITVTESPADIGKTLKTKL 289 >gi|126438953|ref|YP_001057865.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei 668] gi|126452387|ref|YP_001065099.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei 1106a] gi|242317946|ref|ZP_04816962.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 1106b] gi|126218446|gb|ABN81952.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 668] gi|126226029|gb|ABN89569.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 1106a] gi|242141185|gb|EES27587.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 1106b] Length = 309 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 160/301 (53%), Positives = 211/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 17 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 72 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 73 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 132 Query: 119 KSS--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 133 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 192 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 193 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 248 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L Sbjct: 249 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGITVTRNPSEMGRLLKAA 308 Query: 297 L 297 L Sbjct: 309 L 309 >gi|167561702|ref|ZP_02354618.1| succinyl-CoA synthetase subunit alpha [Burkholderia oklahomensis EO147] gi|167568938|ref|ZP_02361812.1| succinyl-CoA synthetase subunit alpha [Burkholderia oklahomensis C6786] Length = 293 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 159/301 (52%), Positives = 211/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSS--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGITVTRNPSEMGRLLKAA 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|145253767|ref|XP_001398396.1| succinyl-CoA ligase [GDP-forming] subunit alpha [Aspergillus niger CBS 513.88] gi|134083968|emb|CAK43063.1| unnamed protein product [Aspergillus niger] Length = 332 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 171/297 (57%), Positives = 220/297 (74%), Gaps = 8/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH EQAI Y T+VVGG +PKK + ++ PVF Sbjct: 37 NLRINGDTKVIFQGFTGKQGTFHAEQAIAY-GTKVVGGTNPKKAGSMH----LDRPVFAN 91 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V+EA + T A A+ ++VPP A I E+IEAEIPL VCITEGIP DMVR+ L+ ++ Sbjct: 92 VSEAVKETGATATALFVPPPLAAKGIEEAIEAEIPLAVCITEGIPQHDMVRITDILKTQN 151 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 152 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 211 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLK K KP V Sbjct: 212 VGIGGDPFSGTNFIDCLKIFLEDEETDGIIMIGEIGGSAEEDAAEFLKANNK--YNKPAV 269 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L+ Sbjct: 270 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALEAAGVVVERSPASLGKALLNEF 326 >gi|325109410|ref|YP_004270478.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Planctomyces brasiliensis DSM 5305] gi|324969678|gb|ADY60456.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Planctomyces brasiliensis DSM 5305] Length = 299 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 161/305 (52%), Positives = 215/305 (70%), Gaps = 14/305 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY------CQTQVVGGIHPKKGSTYWTGGNV 54 M+ILVD+ TK++ QG+TG AG FH++Q Y + +VGG+ P KG Sbjct: 1 MAILVDRETKIITQGITGNAGLFHSQQCRAYAEEVRPGEQVMVGGVTPGKGGQTVD---- 56 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + PVF TV EA + T AN S+I+VPP GDAI+E+ +A I LIV ITEGIPV+DM RV Sbjct: 57 DFPVFNTVEEAVKETGANTSLIFVPPPFCGDAILEAADAGIELIVAITEGIPVMDMARVA 116 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 +LE LIGPNCPGI+TP KIGIMPG I + G +G++S+SGTLTYEA +Q G Sbjct: 117 KKLEDYPCTLIGPNCPGIITPGVAKIGIMPGYIHKPGRIGLISKSGTLTYEATWQLGNLG 176 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +GQSTA+GIGGDP+ GT FID+L++F D+ T++I+M+GEIGG+AE EAA ++K+ Sbjct: 177 MGQSTAIGIGGDPIIGTTFIDLLDMFEEDDETDAILMIGEIGGTAEIEAADYIKEYIS-- 234 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KP+ F+AGKTAPPG+ MGHAGA+ISGGKG AE+K+ A++ AG+ +A SPA +G ++ Sbjct: 235 --KPVGAFIAGKTAPPGKRMGHAGAIISGGKGTAEEKVEALEAAGVVVAESPADMGAAVK 292 Query: 295 ELLGS 299 L Sbjct: 293 AALDK 297 >gi|83720356|ref|YP_441203.1| succinyl-CoA synthetase subunit alpha [Burkholderia thailandensis E264] gi|167579960|ref|ZP_02372834.1| succinyl-CoA synthetase subunit alpha [Burkholderia thailandensis TXDOH] gi|167621353|ref|ZP_02389984.1| succinyl-CoA synthetase subunit alpha [Burkholderia thailandensis Bt4] gi|257140131|ref|ZP_05588393.1| succinyl-CoA synthetase subunit alpha [Burkholderia thailandensis E264] gi|83654181|gb|ABC38244.1| succinyl-CoA synthase, alpha subunit [Burkholderia thailandensis E264] Length = 293 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 159/301 (52%), Positives = 211/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSS--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGIKVTRNPSEMGRLLKAA 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|328773265|gb|EGF83302.1| hypothetical protein BATDEDRAFT_36456 [Batrachochytrium dendrobatidis JAM81] Length = 342 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 176/302 (58%), Positives = 222/302 (73%), Gaps = 7/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 +++++DKNTKV+ QG TGK GT H++ AI Y T++VGG P K T G +PVF Sbjct: 42 LNMMIDKNTKVICQGFTGKMGTLHSKAAIEY-GTRMVGGTSPSKAGTTHLG----LPVFG 96 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA-RLEK 119 +V EA +ASVIYVPP GA AIIE+I+AEIPL+VCITEGIP DMV+VK L + Sbjct: 97 SVKEAVSEVKPDASVIYVPPPGAAAAIIEAIQAEIPLVVCITEGIPQQDMVKVKKILLNQ 156 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + SRLIGPNCPGI+ PD CKIGIMPG I R G +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 157 NKSRLIGPNCPGIIKPDQCKIGIMPGHIHRPGKIGIVSRSGTLTYEAVAQTTAAGLGQTL 216 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKP 238 VGIGGDP GT F+D L++FLAD TE IV++GEIGGSAEE+AA++L R KP Sbjct: 217 CVGIGGDPFNGTNFVDCLKVFLADPETEGIVLIGEIGGSAEEDAAEYLMQHNMSRSNPKP 276 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V F+AG +APPGR MGHAGA+ISGGKG AEDK+ A++ AG+ ++ SPA++G + + Sbjct: 277 VVSFIAGLSAPPGRRMGHAGAIISGGKGKAEDKVAALQRAGVIVSQSPAKLGYYMKKAFD 336 Query: 299 SL 300 L Sbjct: 337 DL 338 >gi|322817830|gb|EFZ25427.1| succinyl-CoA synthetase alpha subunit, putative [Trypanosoma cruzi] Length = 303 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 164/297 (55%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 ++ NTKV+ QG+TGK GT+HT+QAI Y T++VGG++PKK + G +PVF TV Sbjct: 10 WINNNTKVICQGITGKHGTYHTQQAIEY-GTKMVGGVNPKKAGMNYLG----LPVFGTVT 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSS 122 EA + T A+A+VIYVP A+ E+++AEIPL+V ITEGIP DM+RVK+ L ++ + Sbjct: 65 EAVKATGADATVIYVPAPHCAAAVEEALDAEIPLVVVITEGIPQWDMLRVKSMLLSQNKT 124 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPNCPGI+ P+ CKIGIMPG I +KG +G++SRSGTLTYEAV QT+ + LGQS VG Sbjct: 125 RLIGPNCPGIIRPEECKIGIMPGHIHQKGCIGVVSRSGTLTYEAVAQTTAKNLGQSLCVG 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP GT ID ++ +L D ATE I+++GEIGG+AEEEAA+F+K+ KKP+V F Sbjct: 185 IGGDPFNGTNMIDCVKFYLEDPATEGIILIGEIGGTAEEEAAEFIKNH---PIKKPVVSF 241 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 + G TAPPGR MGHAGAV+SGG+G A+ K+ A+K AG+ ++ SPA++G + E + Sbjct: 242 IGGMTAPPGRRMGHAGAVVSGGQGTAKGKMEALKAAGVIVSESPAQLGELMAEAISK 298 >gi|255019806|ref|ZP_05291882.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Acidithiobacillus caldus ATCC 51756] gi|254970735|gb|EET28221.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Acidithiobacillus caldus ATCC 51756] Length = 290 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 169/299 (56%), Positives = 214/299 (71%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ ++T VL QG TGK G+FH++QA+ Y T++VGG+ P KG + G +PVF Sbjct: 1 MSILLHRDTAVLCQGFTGKQGSFHSQQAMAY-GTRMVGGVTPGKGGSEHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A T A ASVIYVP A DAI+E+ A I LIVCITEGIP+ DM+ V+ L S Sbjct: 56 TVADAVAATGATASVIYVPSPFAADAIVEAAAAGIELIVCITEGIPIHDMLAVRHYLAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPGI+TP + KIGIMPG+I R G VGI+SRSGTLTYEAV QT++ GLGQST Sbjct: 116 NARLIGPNCPGIITPGASKIGIMPGAIHRPGRVGIVSRSGTLTYEAVEQTTRLGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G F+DVL LF D TE ++MVGEIGG EE+AA F++ + KP+V Sbjct: 176 VGIGGDPLIGMNFVDVLALFEEDPQTEIVLMVGEIGGRLEEDAAAFIRAHMR----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAP G+ MGHAGA+I GG G A +K + EAG+ SPA++G+ E+LG Sbjct: 232 AFIAGATAPKGKRMGHAGAIIDGGSGSAAEKYAVLAEAGVHCVDSPAQMGQKAAEILGR 290 >gi|317402901|gb|EFV83443.1| succinyl-CoA ligase subunit alpha [Achromobacter xylosoxidans C54] Length = 293 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 161/301 (53%), Positives = 214/301 (71%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCREYANGKAAFVAGVNPKKAGEDFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V +AK T A SVIYVPP+GA AI E++EAE+ L++CITEGIPV DM+ VK R++ Sbjct: 57 FASVKDAKADTGATVSVIYVPPAGAAAAIWEAVEAELDLVICITEGIPVRDMLEVKNRMK 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S+ L+GPNCPG++TPD KIGIMPG I RKG +GI+SRSGTLTYEAV Q ++ GLG Sbjct: 117 AKGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGIVSRSGTLTYEAVAQVTELGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + +DVL++F D T++++M+GEIGG E AAQ+ KD K Sbjct: 177 QSSAVGIGGDPINGLKHVDVLKMFNDDPDTDAVIMIGEIGGPDEVNAAQWAKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI +P+ +G+ L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLEVMEACGIRTTRNPSEMGKLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|300309993|ref|YP_003774085.1| succinyl-CoA synthetase subunit alpha [Herbaspirillum seropedicae SmR1] gi|124483476|emb|CAM32611.1| Succinyl-CoA synthetase alpha chain protein [Herbaspirillum seropedicae] gi|300072778|gb|ADJ62177.1| succinyl-CoA synthetase alpha chain protein [Herbaspirillum seropedicae SmR1] Length = 293 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 160/301 (53%), Positives = 212/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCRDYANGKNAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + V EAK T A SVIYVPP+GA AI E++EAE+ L +CITEGIPV DM+ +K R+ Sbjct: 57 YANVTEAKNATGATVSVIYVPPAGAAAAIWEAVEAELDLAICITEGIPVRDMLALKDRMA 116 Query: 119 K--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K S + L+GPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KAGSKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E AA+++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEANAARWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+E GI + +P+ +GR L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLAIMEECGIKVTRNPSEMGRLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|313901648|ref|ZP_07835083.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Thermaerobacter subterraneus DSM 13965] gi|313468090|gb|EFR63569.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Thermaerobacter subterraneus DSM 13965] Length = 288 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 143/297 (48%), Positives = 197/297 (66%), Gaps = 10/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+D+ T+V+VQG+TG G+FHT Q I Y T+VV G+ P K G VPV+ Sbjct: 1 MAILIDERTRVVVQGITGHQGSFHTGQMIEY-GTRVVAGVSPGKEGQEVKG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A E+ A ASVI+VP DA++E++EA I L+V ITE +P+ D + + AR Sbjct: 56 TVEAAVEKHGATASVIFVPAPFTKDAVLEALEAGIKLVVVITEHVPLHDAMEIMARARLK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + +IGPN G+++P KIGIMP I+ G VGI++RSGTL+YE SQ G GQST Sbjct: 116 GATIIGPNTFGVISPGKSKIGIMPNQIYTPGRVGIVARSGTLSYEIAASLSQAGFGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGD V G FIDVL++F D TE++V+VGEIGG+AEEEAA+++K G KP+V Sbjct: 176 VGMGGDRVVGLSFIDVLKMFEQDRETEAVVLVGEIGGTAEEEAAEYIK-----GMSKPVV 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AGK APPG+ MGHAGA+I G+G + K+ A++ AG +A P ++ + E L Sbjct: 231 AYLAGKHAPPGKRMGHAGAIIERGRGTYQSKVEALEAAGAWVAALPWQVADLVREAL 287 >gi|126740515|ref|ZP_01756202.1| succinyl-CoA synthase, alpha subunit [Roseobacter sp. SK209-2-6] gi|126718316|gb|EBA15031.1| succinyl-CoA synthase, alpha subunit [Roseobacter sp. SK209-2-6] Length = 294 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 199/298 (66%), Positives = 249/298 (83%), Gaps = 5/298 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D+NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG ++N+PVF Sbjct: 1 MAVLIDENTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGQ----SHLNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM+RV+ LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMRVQRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPG++TPD+CKIGIMPG I ++GSVG++SRSGTLTYEAV QTS GLGQS+A Sbjct: 116 SSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDIGLGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+KGTE IDVL+LFL D+ TESI+M+GEIGGSAEEEAA+FL ++ K+GR KP+ Sbjct: 176 VGIGGDPIKGTEHIDVLDLFLDDDETESIIMIGEIGGSAEEEAAEFLAEQKKKGRWKPVA 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+++GGKGGAEDKI AMK AGI +A SPA +G ++++ + Sbjct: 236 GFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKAAGIVVAESPAGLGEAVLKAIK 293 >gi|20094169|ref|NP_614016.1| succinyl-CoA synthetase alpha subunit [Methanopyrus kandleri AV19] gi|19887185|gb|AAM01946.1| Succinyl-CoA synthetase alpha subunit [Methanopyrus kandleri AV19] Length = 287 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 140/295 (47%), Positives = 193/295 (65%), Gaps = 9/295 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 ++D +T+VLVQG+TG+ G+FHT+ + Y T++V G+ P +G G VPV+ TV Sbjct: 1 MLDSDTRVLVQGITGRHGSFHTKLMLEY-GTEIVAGVTPGRGGQEVHG----VPVYDTVE 55 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 EA E T A ASVI+VP A DA++E+IEA + IV ITE IP D +R R Sbjct: 56 EAVEETDAEASVIFVPAPQAPDAVMEAIEAGLDPIVVITEHIPAHDTMRFVELARWEGIR 115 Query: 124 LIGPNCPGIL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PGI+ P+ K+GIMP +F +G V + SRSGTLTYE V ++ GLGQS VG Sbjct: 116 IIGPNTPGIIVPPERVKLGIMPHQVFTEGEVAVASRSGTLTYEIVQAMTEAGLGQSLCVG 175 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GGD + GT FID LE D+ TE++V++GEIGG+AEE AA+++ + KP+V + Sbjct: 176 LGGDQIVGTTFIDFLEYVREDDRTEAVVLIGEIGGNAEELAAEYIAE---TDFPKPVVAY 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG+ APPG+ MGHAGA+I G+G AE KI A ++AG+ +A P + L E L Sbjct: 233 IAGRHAPPGKRMGHAGAIIERGRGTAESKIEAFRKAGVDVAEKPWEVPELLREYL 287 >gi|258572074|ref|XP_002544815.1| succinyl-CoA ligase alpha-chain [Uncinocarpus reesii 1704] gi|237905085|gb|EEP79486.1| succinyl-CoA ligase alpha-chain [Uncinocarpus reesii 1704] Length = 331 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 172/294 (58%), Positives = 218/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ TKVL QG TGK GTFH +QAI Y T+VVGG +PKK ++ PVF T Sbjct: 36 NLRINSETKVLYQGFTGKQGTFHAQQAIDY-GTKVVGGTNPKKAGEMH----LDRPVFAT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T ANAS I+VPP A +I E+IEAE+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 91 VRDAIKETGANASAIFVPPPVAAKSIEEAIEAEMPLVVCITEGIPQHDMVRITDILKTQN 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA+F K K KP V Sbjct: 211 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAEFFKAANKA--NKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALEAAGVIVERSPAALGKTLH 322 >gi|153951047|ref|YP_001398438.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. doylei 269.97] gi|152938493|gb|ABS43234.1| succinyl-CoA synthase, alpha subunit [Campylobacter jejuni subsp. doylei 269.97] Length = 289 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 154/298 (51%), Positives = 199/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y T +VGGI P KG G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTNIVGGITPHKGGQTHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T + CK+GIMPG IF+KG VG++S+SGTLTYEA Q Q G G STA Sbjct: 116 GMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVVQGGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D+ T++IVM+GEIGGS E EAA+F+++ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFQKDDETKAIVMIGEIGGSLEVEAAKFIQENIS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++LG Sbjct: 232 AFIAGATAPKGKRMGHAGAIVGSADESATAKKEALKSYGIHVVDSPALIGEEIQKILG 289 >gi|254523794|ref|ZP_05135849.1| succinyl-CoA synthetase alpha subunit [Stenotrophomonas sp. SKA14] gi|219721385|gb|EED39910.1| succinyl-CoA synthetase alpha subunit [Stenotrophomonas sp. SKA14] Length = 288 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 172/295 (58%), Positives = 216/295 (73%), Gaps = 11/295 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 +++KNTKV+VQG TG+ GTFH Q I Y TQVVGG+ P KG T +++PVF TVA Sbjct: 1 MINKNTKVIVQGFTGQQGTFHATQMIEY-GTQVVGGVTPGKGGTTH----IDLPVFNTVA 55 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS-- 121 +A + T ANASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 DAVQSTGANASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRSHPD 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQST + Sbjct: 116 TVLIGPNCPGVITPGECKIGIMPGHIHQPGKIGIVSRSGTLTYEAVKQTTEVGLGQSTCI 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K+ KKP+VG Sbjct: 176 GIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKNHV----KKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 F+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ +L Sbjct: 232 FIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVVTVRSPGDLGAAIAKL 286 >gi|255009308|ref|ZP_05281434.1| succinyl-CoA synthetase alpha chain [Bacteroides fragilis 3_1_12] gi|313147061|ref|ZP_07809254.1| succinyl-CoA synthetase subunit alpha [Bacteroides fragilis 3_1_12] gi|313135828|gb|EFR53188.1| succinyl-CoA synthetase subunit alpha [Bacteroides fragilis 3_1_12] Length = 289 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 149/294 (50%), Positives = 205/294 (69%), Gaps = 8/294 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T++LVQG+TG+ G FH ++ Y T VVGG P KG T PVF Sbjct: 1 MSILIDKSTRLLVQGITGRDGLFHAKKMAEY-GTNVVGGTSPGKGGTMIDDT---FPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA RT AN SVI+VP A DAI+E+ +A I LI+CITEGIP LD+++ +E Sbjct: 57 TMYEAVRRTQANTSVIFVPARFAADAIMEAADAGIRLIICITEGIPTLDIIKAYRFVELK 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++LIGPNCPG+++P +GI+PG +F G++G++SRSGTLTYE V + +G+GQSTA Sbjct: 117 GAKLIGPNCPGLISPGKSLVGILPGQVFTPGNIGVISRSGTLTYEIVSHLTAKGMGQSTA 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDPV G F D+L + D T++IVM+GEIGG+AEE AA +++ KP+V Sbjct: 177 IGMGGDPVVGLYFRDLLGMLQNDPQTDAIVMIGEIGGNAEEAAATYIRKHV----TKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AGK+APPG+ MGHAGA+ISG G A +KI+A++ AGI +A P++I L Sbjct: 233 AFIAGKSAPPGKQMGHAGAIISGSSGSAAEKISALEAAGIRVAGEPSKIPDLLK 286 >gi|332881132|ref|ZP_08448793.1| succinyl-CoA synthetase, alpha subunit [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680927|gb|EGJ53863.1| succinyl-CoA synthetase, alpha subunit [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 291 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 162/299 (54%), Positives = 212/299 (70%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+KV+VQG TG GTFH EQ I Y T VVGGI P KG G PVF Sbjct: 1 MSVLVNKNSKVIVQGFTGSEGTFHAEQMIAY-GTNVVGGITPNKGGQTHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VPP+ A DAI+E+ EA I +I+ ITEGIPV DMV+V A ++ Sbjct: 56 TVADAVKATGADVSIIFVPPAFAADAIMEAAEAGIKVIITITEGIPVADMVKVAAYIKNR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP+ K+GIMPG IF+KG VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLIGPNCPGVITPEEAKVGIMPGFIFKKGHVGIVSKSGTLTYEAADQIVRQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D T IVM+GEIGG E EAA+++K G KKP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETHCIVMIGEIGGQLEPEAARWIKAN---GNKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP GRTMGHAGA++ G + AE K ++E G+ + SPA+IG + E++ Sbjct: 233 SFIAGETAPKGRTMGHAGAIVGGAEDTAEAKKRILRECGVHVVDSPAKIGEKVKEIMSK 291 >gi|255003993|ref|ZP_05278794.1| succinyl-CoA ligase chain A (sucD) [Anaplasma marginale str. Virginia] Length = 279 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 184/286 (64%), Positives = 219/286 (76%), Gaps = 8/286 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNT+V+ QG TG GTFH+EQAI Y T+VVGG+ P KG T G +PVF Sbjct: 1 MSVLVDKNTRVICQGFTGSNGTFHSEQAIAY-GTKVVGGVTPGKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +AK T ANASVIYVP A DAI E+IEAEI LIVCITEGIPVLDMV+VK L S Sbjct: 56 TVLQAKVETQANASVIYVPAPYAADAIFEAIEAEIELIVCITEGIPVLDMVQVKRALAGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR+IGPNCPGI+TP+ CKIGIMPG I +KG++G++SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRMIGPNCPGIITPEECKIGIMPGYIHKKGNIGVVSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDPV G F+D ++LFL DE T IV++GEIGGS EEEA +FL+ G KKP+V Sbjct: 176 IGIGGDPVHGMSFLDCVQLFLEDEDTHGIVIIGEIGGSEEEEAVEFLQ---SSGTKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 GFVAG+TAPPG+ MGHAGA+ SG G A+ KI MK AG+ +A +P Sbjct: 233 GFVAGQTAPPGKRMGHAGAISSGSSGTAKGKIEFMKRAGVAVAETP 278 >gi|198471011|ref|XP_002133634.1| GA23007 [Drosophila pseudoobscura pseudoobscura] gi|198145724|gb|EDY72261.1| GA23007 [Drosophila pseudoobscura pseudoobscura] Length = 340 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 163/300 (54%), Positives = 221/300 (73%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K TK+LVQG TGK TFH+++A+ Y T VVGG+ PKKG T PVF + Sbjct: 31 NLKINKETKLLVQGFTGKQATFHSQEALKY-GTNVVGGVSPKKGGTKHLDK----PVFKS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + +A+VI++PPS A D I +IE+EI LIV ITEGIP +DMVR+ L + Sbjct: 86 VAEATKELKPDATVIFIPPSNAADGIRSAIESEIGLIVAITEGIPQVDMVRIMQMLNCQE 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++PD CKIGIMPG I ++G VGI+SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLLGPNCPGIISPDQCKIGIMPGDIHKRGCVGIVSRSGTLTYEAVQQTTKTGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G GGDP GT FID L++FL+D T+ I+++GEIGGSAEE+AA+FLK + KP+V Sbjct: 206 IGCGGDPFNGTNFIDGLKIFLSDPETKGIILIGEIGGSAEEDAAEFLKQHNSGCKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG+TAPPGR MGHAGA+I+GGKG A K+ A+++AG+ ++ +P +G +L + + L Sbjct: 266 SFIAGQTAPPGRRMGHAGAIIAGGKGTAPAKVKALEKAGVIVSQNPCHMGSTLYKEMLRL 325 >gi|299755339|ref|XP_001828601.2| succinate-CoA ligase [Coprinopsis cinerea okayama7#130] gi|298411181|gb|EAU93204.2| succinate-CoA ligase [Coprinopsis cinerea okayama7#130] Length = 331 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 167/300 (55%), Positives = 219/300 (73%), Gaps = 7/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ K+TKVL QGLTGK GTFH +A+ Y T++VGG+ P K G +P+F + Sbjct: 33 NLLIHKDTKVLCQGLTGKTGTFHVREALAY-GTKMVGGVSPNKAGQTHLG----LPIFGS 87 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + T +A+V+YVPP A DAIIE+IE EI LIVCITEGIP D +RV L+ +S Sbjct: 88 VREAVKETQPDATVLYVPPPTAADAIIEAIENEISLIVCITEGIPQADEIRVMNALKSQS 147 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P CK+GI PG I + G +GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 148 KSRLVGPNCPGIINPLGCKMGIQPGHIHKPGKIGIVSRSGTLTYEAVAQTTDVGLGQSLC 207 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK-RGRKKPI 239 VGIGGDP GT+ +DV+++FL D TE IV++GEIGG+ EEEAA++L K KP+ Sbjct: 208 VGIGGDPFPGTQHVDVIKVFLEDPNTEGIVIIGEIGGTMEEEAAEYLAQYNKTSANPKPV 267 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VGF+AG+TAPPGR MGHAGA+ISGGKG A DK+ A++ AG+ + SPA+IG +++ + + Sbjct: 268 VGFIAGRTAPPGRRMGHAGAIISGGKGAAIDKVKALEAAGVIVTDSPAKIGSEMLKAMQA 327 >gi|291298134|ref|YP_003509412.1| succinyl-CoA synthetase subunit alpha [Stackebrandtia nassauensis DSM 44728] gi|290567354|gb|ADD40319.1| succinyl-CoA synthetase, alpha subunit [Stackebrandtia nassauensis DSM 44728] Length = 295 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 140/302 (46%), Positives = 201/302 (66%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +++N+K++VQG+TG GT HT + +L VVGG++P+K + +PVF Sbjct: 1 MTIFLNENSKIIVQGMTGAEGTKHTRR-MLASGANVVGGVNPRKAGSKVDFDGTELPVFA 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA--RLE 118 TVAEA T A+ +V++VPP A DA++E++ AEI L V ITEGIPV D V A + + Sbjct: 60 TVAEAMTETGADTTVVFVPPKFAKDAVLEAVNAEIGLCVVITEGIPVHDSVTFWAQSQAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPG+++P GI+P I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GGKTRIIGPNCPGVISPGKSNAGIIPADITKPGKIGLVSKSGTLTYQLMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV GT ID L F D TE+IVM+GEIGG AEE AA F+K+ KP Sbjct: 178 TCVGIGGDPVIGTTHIDCLRAFQDDPETEAIVMIGEIGGDAEERAADFIKENV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAPPG+TMGHAGA+ISG G A+ K A++ AG+ + +P++ + E++ Sbjct: 234 VVGYIAGFTAPPGKTMGHAGAIISGSAGTADAKAKALEAAGVRVGKTPSQTAELMREVVK 293 Query: 299 SL 300 L Sbjct: 294 GL 295 >gi|284992794|ref|YP_003411348.1| succinyl-CoA synthetase subunit alpha [Geodermatophilus obscurus DSM 43160] gi|284066039|gb|ADB76977.1| succinyl-CoA synthetase, alpha subunit [Geodermatophilus obscurus DSM 43160] Length = 292 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 144/299 (48%), Positives = 204/299 (68%), Gaps = 7/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +++N+KV+VQG+TG G HT Q +L T +VGG++PKK VPVF Sbjct: 1 MSIFLNENSKVIVQGMTGSEGRKHT-QRMLASGTAIVGGVNPKKAGQSVDFDGAGVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 VAEA + T A+ SVI+VPP+GA +A+IE+++A+I L V ITEGIPV D A + Sbjct: 60 NVAEAMKETGADVSVIFVPPAGAKNAVIEAVDAQIGLAVVITEGIPVHDSTHFWAHAQGG 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S+R+IGPNCPG+++P GI+P +I ++G +G++S+SGTLTY+ +++ +G ST Sbjct: 120 STRIIGPNCPGLISPGRSNAGIIPANITKQGKIGLVSKSGTLTYQMMYELRD--IGFSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L+ F D TE+IVM+GEIGG AEE AA F++ KP+V Sbjct: 178 VGIGGDPVIGTTHIDCLQAFQDDPETEAIVMIGEIGGDAEERAADFIRANV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ R + E++G+ Sbjct: 234 GYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKQEALEAAGVRVGKTPSETARLMREIVGA 292 >gi|291288246|ref|YP_003505062.1| succinyl-CoA synthetase, alpha subunit [Denitrovibrio acetiphilus DSM 12809] gi|290885406|gb|ADD69106.1| succinyl-CoA synthetase, alpha subunit [Denitrovibrio acetiphilus DSM 12809] Length = 295 Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 162/301 (53%), Positives = 211/301 (70%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+ TKVLVQGLTG G FH ++ Y T +V G+ P KG G PVF Sbjct: 1 MSILVNNRTKVLVQGLTGSQGRFHAQKMKEY-GTNIVAGVVPGKGGLEVDGT----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T ANAS++YVPP+ A DA+IESI+A + L VCITEGIPV DM+ VK + S Sbjct: 56 TVEEAIRKTGANASIVYVPPAYAADAVIESIDANLDLCVCITEGIPVKDMIMVKRLMTTS 115 Query: 121 SSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 SSR L+GPNCPG++TP CK+GIMPG I + G++GI+S+SGTLTYEAV Q EG GQS Sbjct: 116 SSRTMLVGPNCPGVITPGECKMGIMPGEIHKPGTIGIISKSGTLTYEAVKQVGAEGFGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G ++ID+LE+F D TE +V++GEIGG AE +A +++K KP Sbjct: 176 TCIGIGGDPIVGLKYIDLLEMFEYDAQTECVVLIGEIGGQAEVKAGEWIKQN----FSKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V F+AG+TAP G+ MGHAGA+ISGG A K+ A++E G+ + SPA IG+ + E+L Sbjct: 232 VVSFIAGQTAPKGKRMGHAGAIISGGDDTAAAKMKALREHGVHVVESPADIGKKVAEVLR 291 Query: 299 S 299 Sbjct: 292 K 292 >gi|219849684|ref|YP_002464117.1| succinyl-CoA synthetase subunit alpha [Chloroflexus aggregans DSM 9485] gi|219543943|gb|ACL25681.1| succinyl-CoA synthetase, alpha subunit [Chloroflexus aggregans DSM 9485] Length = 296 Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 169/298 (56%), Positives = 214/298 (71%), Gaps = 7/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D NT++LVQG+TGK G FHT Q + Y T+VV G+ P +G G VPVF Sbjct: 1 MSILIDANTRLLVQGITGKEGEFHTRQMLDY-GTKVVAGVVPGRGGQMAIDGR--VPVFN 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA T AN +VIYVP A DAI ES A IPLIVCITEGIP LDMV A +++ Sbjct: 58 TVSEAVAATGANTAVIYVPAPFAPDAIRESAAARIPLIVCITEGIPALDMVSTYAFVQEC 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG+LTP + K+GI+PG+I G VGI+S+SGTLTYEAV ++ G+GQST Sbjct: 118 GVRLIGPNCPGLLTPGAAKVGIIPGNIAMPGPVGIVSKSGTLTYEAVDALTRIGIGQSTI 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVL +F AD TE+IV++GEIGG+AE+EAA ++K KP+V Sbjct: 178 VGIGGDPIIGTNFIDVLAMFEADPQTEAIVLIGEIGGTAEQEAAAYIKAHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPG+ MGHAGA+ISGG+G A++KI A++ G+ +A P I + E L Sbjct: 234 GFIAGQTAPPGKRMGHAGAIISGGEGTAQEKIAALESVGVRVARMPTDIAGLVKEALA 291 >gi|76808907|ref|YP_332389.1| succinyl-CoA synthetase subunit alpha [Burkholderia pseudomallei 1710b] gi|121598420|ref|YP_993972.1| succinyl-CoA synthetase subunit alpha [Burkholderia mallei SAVP1] gi|124384244|ref|YP_001028361.1| succinyl-CoA synthetase subunit alpha [Burkholderia mallei NCTC 10229] gi|126451321|ref|YP_001079595.1| succinyl-CoA synthetase subunit alpha [Burkholderia mallei NCTC 10247] gi|134279750|ref|ZP_01766462.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 305] gi|217419486|ref|ZP_03450992.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 576] gi|226199403|ref|ZP_03794961.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei Pakistan 9] gi|237811013|ref|YP_002895464.1| succinate-CoA ligase, alpha subunit subfamily [Burkholderia pseudomallei MSHR346] gi|238563605|ref|ZP_00438605.2| succinate-CoA ligase, alpha subunit subfamily [Burkholderia mallei GB8 horse 4] gi|254177108|ref|ZP_04883765.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei ATCC 10399] gi|254181631|ref|ZP_04888228.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 1655] gi|254187589|ref|ZP_04894101.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei Pasteur 52237] gi|254196300|ref|ZP_04902724.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei S13] gi|254203785|ref|ZP_04910145.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei FMH] gi|254208762|ref|ZP_04915110.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei JHU] gi|254258780|ref|ZP_04949834.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 1710a] gi|254296290|ref|ZP_04963747.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 406e] gi|254360189|ref|ZP_04976459.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei 2002721280] gi|76578360|gb|ABA47835.1| succinyl-CoA synthase, alpha subunit [Burkholderia pseudomallei 1710b] gi|121227230|gb|ABM49748.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei SAVP1] gi|124292264|gb|ABN01533.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei NCTC 10229] gi|126244191|gb|ABO07284.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei NCTC 10247] gi|134248950|gb|EBA49032.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 305] gi|147745297|gb|EDK52377.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei FMH] gi|147750638|gb|EDK57707.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei JHU] gi|148029429|gb|EDK87334.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei 2002721280] gi|157805803|gb|EDO82973.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 406e] gi|157935269|gb|EDO90939.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei Pasteur 52237] gi|160698149|gb|EDP88119.1| succinyl-CoA synthase, alpha subunit [Burkholderia mallei ATCC 10399] gi|169653043|gb|EDS85736.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei S13] gi|184212169|gb|EDU09212.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 1655] gi|217396790|gb|EEC36806.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 576] gi|225928479|gb|EEH24508.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei Pakistan 9] gi|237505320|gb|ACQ97638.1| succinate-CoA ligase, alpha subunit subfamily [Burkholderia pseudomallei MSHR346] gi|238520368|gb|EEP83829.1| succinate-CoA ligase, alpha subunit subfamily [Burkholderia mallei GB8 horse 4] gi|254217469|gb|EET06853.1| succinyl-CoA synthetase, alpha subunit [Burkholderia pseudomallei 1710a] Length = 309 Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 160/301 (53%), Positives = 211/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 17 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGDNFEG----IPI 72 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 73 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 132 Query: 119 KSS--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 133 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 192 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 193 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEANAAQWIKDNM----K 248 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M+ GI + +P+ +GR L Sbjct: 249 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGITVTRNPSEMGRLLKAA 308 Query: 297 L 297 L Sbjct: 309 L 309 >gi|114778148|ref|ZP_01453035.1| succinyl-CoA synthetase, alpha subunit [Mariprofundus ferrooxydans PV-1] gi|114551566|gb|EAU54120.1| succinyl-CoA synthetase, alpha subunit [Mariprofundus ferrooxydans PV-1] Length = 289 Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 165/298 (55%), Positives = 205/298 (68%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L+DK T+V+ QG TGK G+FH++Q I Y T V G + P KG +N PVF Sbjct: 1 MSVLLDKQTRVICQGFTGKQGSFHSQQMIEYGTTFVGG-VTPGKGGQTH----LNRPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VA+A + A A+VI+VPP A AIIE+ A I LI CITEGIPV DM+ VK +L Sbjct: 56 SVADAVAKEGAEATVIFVPPRFAAAAIIEAATAGIRLIACITEGIPVQDMLAVKRQLAAF 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPGI+TP KIGIMPG I G VG++SRSGTLTYEAV Q SQ GLGQST Sbjct: 116 DCTLIGPNCPGIITPGEAKIGIMPGHIHLPGRVGVISRSGTLTYEAVEQLSQTGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDP+ G FID L LF DE TE +VM+GEIGG+ EE AA F++D KP+V Sbjct: 176 IGMGGDPIHGMNFIDALRLFELDEQTEGVVMIGEIGGADEEHAAAFIRDHVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA+ISGGKG AE K NA++EAG+ + +P +G+ + LL Sbjct: 232 AFIAGATAPAGKRMGHAGAIISGGKGTAEAKFNALEEAGVSVEHNPTLLGKRMQALLA 289 >gi|57242652|ref|ZP_00370589.1| SucD [Campylobacter upsaliensis RM3195] gi|57016581|gb|EAL53365.1| SucD [Campylobacter upsaliensis RM3195] Length = 289 Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 155/297 (52%), Positives = 199/297 (67%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+VQG TGK TFH EQ + Y TQ+VGG+ P KG T G PVF Sbjct: 1 MSILVNKNTKVIVQGFTGKEATFHAEQCMAY-GTQIVGGVTPFKGGTEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA + T A+ S+I+VP GD++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVSEAIKATGADMSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKDMMFAKQYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPGI+T CK+GIMPG IF+KG VG++S+SGTLTYEA Q +Q G G STA Sbjct: 116 GMKIIGPNCPGIITSQECKLGIMPGFIFKKGCVGLISKSGTLTYEAANQVAQSGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G + ++L F D T++IVM+GEIGGS E EAA+F+K+ KP+V Sbjct: 176 VGIGGDPIIGLAYKELLSEFEKDAETKAIVMIGEIGGSLEVEAAKFIKENI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAP G+ MGHAGA++ A K A+K GI + SPA IG + ++L Sbjct: 232 AFIAGATAPKGKRMGHAGAIVGSSDESAAAKKEALKSYGIHVVDSPALIGEEIKKIL 288 >gi|167521159|ref|XP_001744918.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776532|gb|EDQ90151.1| predicted protein [Monosiga brevicollis MX1] Length = 315 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 176/299 (58%), Positives = 222/299 (74%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+ QG TGK GTFH+E AI Y TQ+VGG+ P KG ++++PVF + Sbjct: 21 ALRINKDTKVICQGFTGKQGTFHSEAAIAY-GTQMVGGVSPGKGGR----EHLDLPVFNS 75 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAK+ T A+A+VIYVPP A AI E++EAEIPL VCITEGIP DMVRVK L + Sbjct: 76 VKEAKDATNADATVIYVPPPFAAAAIFEAMEAEIPLAVCITEGIPQADMVRVKHALVRQD 135 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I G++GI+SRSGTLTYEAV QTS GLGQS Sbjct: 136 KTRLIGPNCPGIIKPGECKIGIMPGHIHVPGNIGIVSRSGTLTYEAVGQTSAVGLGQSLC 195 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID LE+FL D T+ I+M+GEIGGSAEEEAA++LK +P+V Sbjct: 196 VGIGGDPFNGTNFIDCLEVFLNDPETKGIIMIGEIGGSAEEEAAEYLKQHNTV---RPVV 252 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+ISGGKGGA KI A+++AG+ ++ SPA++G + + + Sbjct: 253 SFIAGLTAPPGRRMGHAGAIISGGKGGAGAKIAALEDAGVIVSKSPAQMGVLMKQEMEK 311 >gi|313675255|ref|YP_004053251.1| succinyl-CoA synthetase, alpha subunit [Marivirga tractuosa DSM 4126] gi|312941953|gb|ADR21143.1| succinyl-CoA synthetase, alpha subunit [Marivirga tractuosa DSM 4126] Length = 291 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 156/299 (52%), Positives = 211/299 (70%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG GTFH EQ I Y T VVGG+ P KG +++ PVF Sbjct: 1 MSVLVNKDSKVIVQGFTGSEGTFHAEQMIEY-GTNVVGGVTPGKGGQ----KHLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + AN S+I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DM++ K ++ Sbjct: 56 TVEDAVKEAGANVSIIFVPPAFAADAIMEAADAGIKVIITITEGIPVKDMMKAKTYIQDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP K+GIMPG +F+KG +GI+S+SGTLTYEA Q + GLG STA Sbjct: 116 DLTLIGPNCPGVITPGEAKVGIMPGFVFKKGKIGIVSKSGTLTYEAADQIVKAGLGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +++ + D+ TE+IVM+GEIGG+ E EAA+++K+ G KKP+V Sbjct: 176 IGIGGDPIIGTPTKEAVKMLMEDDETEAIVMIGEIGGNYEAEAARWIKEN---GNKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AGKTAP GR MGHAGA+I G AE K+ M E GI + SPA IG ++ + L Sbjct: 233 GFIAGKTAPAGRRMGHAGAIIGGKDDTAEAKMKIMDECGIYVVQSPADIGETMKKALSK 291 >gi|289743035|gb|ADD20265.1| succinyl-CoA synthetase alpha subunit [Glossina morsitans morsitans] Length = 331 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 172/300 (57%), Positives = 230/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ +N++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF Sbjct: 34 NLLLTENSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFKN 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+ T +A+VIYVPP+GA AI+E++E+EIPLIVCITEG+P DMVRVK L + Sbjct: 89 VAEAKKATDPHATVIYVPPAGAAAAILEALESEIPLIVCITEGVPQHDMVRVKHALLTQQ 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 149 KSRLVGPNCPGIIAPERCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVNQTTEVGLGQTLC 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA++L + KP+V Sbjct: 209 VGIGGDPFNGTDFIDCLEIFLRDPDTKGIILIGEIGGVAEEKAAEYLSYFNTGMKAKPVV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++A + + SPA++G+ L + + L Sbjct: 269 SFIAGLSAPPGRRMGHAGAIISGGKGGAGDKIKALEKANVIVTRSPAQMGKELHKEMKRL 328 >gi|15605557|ref|NP_220343.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis D/UW-3/CX] gi|76789567|ref|YP_328653.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis A/HAR-13] gi|237803254|ref|YP_002888448.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis B/Jali20/OT] gi|255311662|ref|ZP_05354232.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis 6276] gi|255317963|ref|ZP_05359209.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis 6276s] gi|3329291|gb|AAC68419.1| Succinyl-CoA Synthetase, Alpha [Chlamydia trachomatis D/UW-3/CX] gi|76168097|gb|AAX51105.1| succinyl-CoA synthetase alpha chain [Chlamydia trachomatis A/HAR-13] gi|231274488|emb|CAX11284.1| succinyl-CoA synthetase alpha chain [Chlamydia trachomatis B/Jali20/OT] gi|296436377|gb|ADH18551.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis G/9768] gi|296437308|gb|ADH19478.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis G/11222] gi|296438236|gb|ADH20397.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis G/11074] gi|297140737|gb|ADH97495.1| succinyl-CoA synthetase subunit alpha [Chlamydia trachomatis G/9301] gi|297748951|gb|ADI51497.1| Succinyl-CoA synthetase alpha chain [Chlamydia trachomatis D-EC] gi|297749831|gb|ADI52509.1| Succinyl-CoA synthetase alpha chain [Chlamydia trachomatis D-LC] Length = 291 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 152/298 (51%), Positives = 209/298 (70%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M L+ K+ ++ QG+TGKAG+FHT Q + Y + VGG+ P KG + + +++P+F Sbjct: 1 MLELLSKDLPIITQGITGKAGSFHTTQCVAY-GSNFVGGVTPGKGGSQF----LDLPIFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK+ T AS+I+VPP A +AI E+ +A I LIVCITEGIP+ DM+ V + +EKS Sbjct: 56 SVLEAKQATGCRASMIFVPPPFAAEAIFEAEDAGIELIVCITEGIPIKDMLEVASLMEKS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +S LIGPNCPG++ P CKIGIMPG I G VG++SRSGTLTYEAV+Q +Q +GQS Sbjct: 116 ASSLIGPNCPGVIKPGVCKIGIMPGYIHLPGKVGVVSRSGTLTYEAVWQLTQRKIGQSVC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+ F D TE+++M+GEIGGSAEEEAA + + + KP++ Sbjct: 176 IGIGGDPLNGTSFIDALQEFEKDSQTEAVLMIGEIGGSAEEEAADWTRQHSS----KPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAP G+ MGHAGA+ISG G A K A+++AG+ + S A IG ++ +L Sbjct: 232 AFIAGATAPKGKRMGHAGAIISGKSGDAFSKQEALRQAGVTVVESLALIGEAVASVLK 289 >gi|315022910|gb|EFT35933.1| succinyl-CoA synthetase, alpha subunit [Riemerella anatipestifer RA-YM] gi|325336452|gb|ADZ12726.1| Succinyl-CoA synthetase, alpha subunit [Riemerella anatipestifer RA-GD] Length = 290 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 165/298 (55%), Positives = 214/298 (71%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+++V+VQG TG GTFH Q I Y T VVGG+ P KG T G PVF Sbjct: 1 MSVLVNKDSRVIVQGFTGNEGTFHAGQMIDY-GTNVVGGVTPGKGGTEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A E+ AN S+I+VPP+ A DAI+E+ +A I +IVCITEGIPV DM +VK + Sbjct: 56 TVADAVEKAGANVSIIFVPPAFAADAIMEAADAGIKVIVCITEGIPVADMTKVKNYIADK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+T D KIGIMPG +F+KG VGI+S+SGTLTYEA Q + G G STA Sbjct: 116 DCRLIGPNCPGIITSDEAKIGIMPGFVFKKGKVGIVSKSGTLTYEAADQVVRAGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + LE+F+ D TE++VM+GEIGG+ E EAA++ K G KKP+V Sbjct: 176 IGIGGDPIIGTTTKEALEMFINDPETEAVVMIGEIGGNLEAEAAKWYKA---SGSKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + A+ K+ M+E GI + SPA IG ++ ++LG Sbjct: 233 GFIAGQTAPKGRTMGHAGAIVGGAEDTAQAKMAIMRENGINVVDSPADIGVTIAKVLG 290 >gi|313206103|ref|YP_004045280.1| succinyl-CoA synthetase, alpha subunit [Riemerella anatipestifer DSM 15868] gi|312445419|gb|ADQ81774.1| succinyl-CoA synthetase, alpha subunit [Riemerella anatipestifer DSM 15868] Length = 290 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 165/298 (55%), Positives = 214/298 (71%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+++V+VQG TG GTFH Q I Y T VVGG+ P KG T G PVF Sbjct: 1 MSVLVNKDSRVIVQGFTGNEGTFHAGQMIDY-GTNVVGGVTPGKGGTEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A E+ AN S+I+VPP+ A DAI+E+ +A I +IVCITEGIPV DM +VK + Sbjct: 56 TVADAVEKADANVSIIFVPPAFAADAIMEAADAGIKVIVCITEGIPVADMTKVKNYIADK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+T D KIGIMPG +F+KG VGI+S+SGTLTYEA Q + G G STA Sbjct: 116 DCRLIGPNCPGIITSDEAKIGIMPGFVFKKGKVGIVSKSGTLTYEAADQVVRAGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + LE+F+ D TE++VM+GEIGG+ E EAA++ K G KKP+V Sbjct: 176 IGIGGDPIIGTTTKEALEMFINDPETEAVVMIGEIGGNLEAEAAKWYKA---SGSKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + A+ K+ M+E GI + SPA IG ++ ++LG Sbjct: 233 GFIAGQTAPKGRTMGHAGAIVGGAEDTAQAKMAIMRENGINVVDSPADIGVTIAKVLG 290 >gi|299139180|ref|ZP_07032356.1| succinyl-CoA synthetase, alpha subunit [Acidobacterium sp. MP5ACTX8] gi|298598860|gb|EFI55022.1| succinyl-CoA synthetase, alpha subunit [Acidobacterium sp. MP5ACTX8] Length = 291 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 178/299 (59%), Positives = 223/299 (74%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNT+++VQG+TG+ GTFH + Y T+VVGG+ P KG T G PVF Sbjct: 1 MSVLVDKNTRLIVQGITGREGTFHAKGCAEY-GTKVVGGVTPGKGGTTHEG----WPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T ANA+VI+VPP A D I+E+ A +PL+VCITEGIPVLDMV+V ++ S Sbjct: 56 TVEEAVKETGANATVIFVPPPAAADGILEATAAGVPLVVCITEGIPVLDMVKVWEVVKTS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+++P KIGIMPG I ++GSVGI+S+SGTLTYEAV+Q +Q G+GQSTA Sbjct: 116 KSRLIGPNCPGVISPGKAKIGIMPGRIHKEGSVGIVSKSGTLTYEAVYQLTQRGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID L L D TE+I+M+GEIGGSAEE AA+F+K KKP+V Sbjct: 176 IGIGGDPIIGTTHIDALRLLNDDPETEAIIMIGEIGGSAEEAAAEFIKQHV----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA+ISGG+G A K+ AM AGI + SPA IG ++ LLG Sbjct: 232 GFIAGQTAPPGRRMGHAGAIISGGEGTAASKMAAMSAAGITVVKSPAEIGDAMARLLGK 290 >gi|71667777|ref|XP_820834.1| succinyl-CoA synthetase alpha subunit [Trypanosoma cruzi strain CL Brener] gi|70886195|gb|EAN98983.1| succinyl-CoA synthetase alpha subunit, putative [Trypanosoma cruzi] Length = 303 Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats. Identities = 163/297 (54%), Positives = 221/297 (74%), Gaps = 9/297 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 ++ NTKV+ QG+TGK GT+HT+QAI Y T+++GG++PKK + G +PVF TV Sbjct: 10 WINNNTKVICQGITGKHGTYHTQQAIEY-GTKMIGGVNPKKAGMNYLG----LPVFGTVT 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSS 122 EA + T A+A+VIYVP A+ E+++AEIPL+V ITEGIP DM+RVK+ L ++ + Sbjct: 65 EAVKATGADATVIYVPAPHCAAAVEEALDAEIPLVVVITEGIPQWDMLRVKSMLLSQNKT 124 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPNCPGI+ P+ CKIGIMPG I +KG +G++SRSGTLTYEAV QT+ + LGQS VG Sbjct: 125 RLIGPNCPGIIRPEECKIGIMPGHIHQKGCIGVVSRSGTLTYEAVAQTTAKSLGQSLCVG 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP GT ID ++ +L D ATE I+++GEIGG+AEEEAA+F+K+ KKP+V F Sbjct: 185 IGGDPFNGTNMIDCVKFYLEDPATEGIILIGEIGGTAEEEAAEFIKNH---PIKKPVVSF 241 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 + G TAPPGR MGHAGAV+SGG+G A+ K+ A+K AG+ ++ SPA++G + E + Sbjct: 242 IGGMTAPPGRRMGHAGAVVSGGQGTAKGKMEALKAAGVIVSESPAQLGELMAEAISK 298 >gi|256818907|ref|YP_003140186.1| succinyl-CoA synthetase, alpha subunit [Capnocytophaga ochracea DSM 7271] gi|315224288|ref|ZP_07866122.1| succinyl-CoA synthetase subunit alpha [Capnocytophaga ochracea F0287] gi|256580490|gb|ACU91625.1| succinyl-CoA synthetase, alpha subunit [Capnocytophaga ochracea DSM 7271] gi|314945678|gb|EFS97693.1| succinyl-CoA synthetase subunit alpha [Capnocytophaga ochracea F0287] Length = 291 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 160/299 (53%), Positives = 211/299 (70%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+KV+VQG TG GTFH EQ I Y T VVGGI P KG G PVF Sbjct: 1 MSVLVNKNSKVIVQGFTGSEGTFHAEQMIAY-GTNVVGGITPNKGGQTHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DMV+V A ++ Sbjct: 56 TVADAVKATGADVSIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMVKVAAYIKNR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP+ K+GIMPG IF+KG VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLVGPNCPGVITPEEAKVGIMPGFIFKKGHVGIVSKSGTLTYEAADQIVRQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D T IVM+GEIGG E EAA+++K G KKP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETHCIVMIGEIGGQLEPEAARWIKAN---GNKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP GRTMGHAGA++ G AE K ++E G+ + SPA+IG + E++ Sbjct: 233 SFIAGETAPKGRTMGHAGAIVGGADDTAEAKKRILRECGVHVVDSPAKIGEKVAEIMKK 291 >gi|330818196|ref|YP_004361901.1| succinyl-CoA synthetase subunit alpha [Burkholderia gladioli BSR3] gi|327370589|gb|AEA61945.1| succinyl-CoA synthetase subunit alpha [Burkholderia gladioli BSR3] Length = 293 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 158/301 (52%), Positives = 210/301 (69%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK+ T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKQETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSS--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+ +F D T+++VM+GEIGG E AA+++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMRMFNDDPDTDAVVMIGEIGGPDEATAAEWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ +GR L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGIKVTRNPSEMGRLLKAA 292 Query: 297 L 297 + Sbjct: 293 I 293 >gi|90109554|pdb|2FP4|A Chain A, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa Synthetase In Complex With Gtp gi|90109574|pdb|2FPI|A Chain A, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa Synthetase From Polyethylene Glycol gi|90109582|pdb|2FPP|A Chain A, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa Synthetase From Polyethylene Glycol With Chloride Ions Length = 305 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 218/298 (73%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QG TGK GTFH++QA+ Y V G ++ +PVF TV Sbjct: 9 LYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGT-----TPGKGGKTHLGLPVFNTV 63 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL + Sbjct: 64 KEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGK 123 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 124 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 183 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 184 GIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVVS 243 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MG AGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 244 FIAGLTAPPGRRMGXAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYKEFEK 301 >gi|322492513|emb|CBZ27788.1| putative succinyl-CoA synthetase alpha subunit [Leishmania mexicana MHOM/GT/2001/U1103] Length = 299 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 172/296 (58%), Positives = 218/296 (73%), Gaps = 9/296 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 V+K+TKV+VQG+TGKAGTFHT++A+ Y T+VVGG+ PKK T G VPVF T A Sbjct: 10 WVNKDTKVIVQGMTGKAGTFHTKEAMAY-GTKVVGGVSPKKAGTTALG----VPVFATAA 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSS 122 EA + T A ASV+YVP +I E+++AE+PL+V ITEGIP DM+RVK+ L ++ + Sbjct: 65 EAVKATGATASVLYVPAPSCAASIEEALDAELPLVVVITEGIPQWDMLRVKSMLLSQNKT 124 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ EGLGQS VG Sbjct: 125 RLIGPNCPGIIKPAECKIGIMPGHIHKRGKIGIVSRSGTLTYEAVAQTTAEGLGQSLCVG 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP GT +D L LFL D TE I+++GEIGG+AEEEAA F+K+ KKPIV F Sbjct: 185 IGGDPFNGTNMVDCLRLFLNDPETEGIILIGEIGGTAEEEAADFIKN---SPIKKPIVSF 241 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + G TAPPGR MGHAGA++SGG G A+ K A++ AG+ I+ SPA +G+ + EL Sbjct: 242 IGGATAPPGRRMGHAGAIVSGGMGTAKGKKEALRAAGVTISDSPAHLGKHMAELFS 297 >gi|312130295|ref|YP_003997635.1| succinyl-CoA synthetase, alpha subunit [Leadbetterella byssophila DSM 17132] gi|311906841|gb|ADQ17282.1| succinyl-CoA synthetase, alpha subunit [Leadbetterella byssophila DSM 17132] Length = 291 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 162/299 (54%), Positives = 211/299 (70%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KN+KV+VQG TG GTFH Q I Y T VVGG+ P KG ++ PVF Sbjct: 1 MSILVNKNSKVIVQGFTGSEGTFHAGQMIEY-GTNVVGGVTPGKGGQTH----LDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A+ S+I+VPP A DAI+E+ +A I +IVCITEGIP DMV+ K+ + Sbjct: 56 TVEEAVKETGADVSIIFVPPGFAADAIMEAAQAGIKVIVCITEGIPTKDMVKAKSFISTY 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPGI+T + K+GIMPG IF+KG++G++S+SGTLTYEAV Q ++ GLGQSTA Sbjct: 116 DCTLIGPNCPGIITAEEAKVGIMPGFIFKKGTIGVVSKSGTLTYEAVDQLTKVGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT +E+ + D TE IVM+GEIGG E EAA+++K+ G KKP+V Sbjct: 176 IGIGGDPIIGTTTKQAVEMLMNDPETEGIVMIGEIGGGMEAEAARYIKE---TGNKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAP GR MGHAGA+I G A K+ M+E GI + SPA IG ++++ LG Sbjct: 233 GFIAGQTAPKGRRMGHAGAIIGGADDTAAAKMAIMRECGIHVVDSPAEIGETMLKALGK 291 >gi|298208207|ref|YP_003716386.1| succinyl-CoA synthase, alpha subunit [Croceibacter atlanticus HTCC2559] gi|83848128|gb|EAP85998.1| succinyl-CoA synthase, alpha subunit [Croceibacter atlanticus HTCC2559] Length = 290 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 158/298 (53%), Positives = 212/298 (71%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIEY-GTNVVGGVTPGKGGQTHLDK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + A+ S+I+VPP+ A DAI+E+ EA I +I+CITEGIPV DM+ VK +E Sbjct: 56 TVDEAVKEAKADTSIIFVPPAFAADAIMEAAEAGIKVIICITEGIPVKDMITVKNYIENK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG +F+KG+VGI+S+SGTLTYEA Q ++ LG +TA Sbjct: 116 DVRLIGPNCPGVITPGEAKVGIMPGFVFKKGNVGIVSKSGTLTYEAADQVVKQNLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +E+ + D+ T+ IVM+GEIGG E +AA++ K+ G KKPIV Sbjct: 176 IGIGGDPIIGTTTKEAVEMLINDDETDCIVMIGEIGGQLEADAAKWYKE---SGSKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + A+ K +KE+GI + SPA IG+ + E+LG Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSEDTAQAKKKILKESGIHVVDSPAEIGKKVAEVLG 290 >gi|322492514|emb|CBZ27789.1| putative succinyl-CoA synthetase alpha subunit [Leishmania mexicana MHOM/GT/2001/U1103] Length = 299 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 172/296 (58%), Positives = 218/296 (73%), Gaps = 9/296 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 V+K+TKV+VQG+TGKAGTFHT++A+ Y T+VVGG+ PKK T G VPVF T A Sbjct: 10 WVNKDTKVIVQGMTGKAGTFHTKEAMAY-GTKVVGGVSPKKAGTTALG----VPVFATAA 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSS 122 EA + T A ASV+YVP +I E+++AE+PL+V ITEGIP DM+RVK+ L ++ + Sbjct: 65 EAVKATGATASVLYVPAPSCAASIEEALDAELPLVVVITEGIPQWDMLRVKSMLLSQNKT 124 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ EGLGQS VG Sbjct: 125 RLIGPNCPGIIKPAECKIGIMPGHIHKRGKIGIVSRSGTLTYEAVAQTTAEGLGQSLCVG 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP GT +D L LFL D TE I+++GEIGG+AEEEAA F+K+ KKPIV F Sbjct: 185 IGGDPFNGTNMVDCLRLFLNDPETEGIILIGEIGGTAEEEAADFIKN---SPIKKPIVSF 241 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + G TAPPGR MGHAGA++SGG G A+ K A++ AG+ I+ SPA +G+ + EL Sbjct: 242 IGGATAPPGRRMGHAGAIVSGGMGTAKGKKEALRAAGVTISDSPAHLGKHMAELFS 297 >gi|332025029|gb|EGI65216.1| Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Acromyrmex echinatior] Length = 1767 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 171/278 (61%), Positives = 214/278 (76%), Gaps = 6/278 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +D NTKV+ QG TGK GTFH +QA+ Y T++VGG+ PKK G PV+ T Sbjct: 34 NLKIDANTKVMCQGFTGKQGTFHCQQALDY-GTKIVGGVSPKKAGIEHLGK----PVYKT 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE TAA A+VIYVPP A AI+E+I+AE+PLIVCITEGIP DMV+VK RL E++ Sbjct: 89 VKEAKEATAATATVIYVPPPAAASAIMEAIDAEMPLIVCITEGIPQHDMVKVKRRLLEQN 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 149 KSRLIGPNCPGIIAPEQCKIGIMPGHIHQKGKIGIVSRSGTLTYEAVNQTTLTGLGQTLC 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID L++FL D I+M+GEIGGSAEE AA++L ++ KP+V Sbjct: 209 VGIGGDPFNGTDFIDCLDVFLTDPDCCGIIMIGEIGGSAEEFAAEYLIEKNTGPTAKPVV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEA 278 F+AG TAPPGR MGHAGA+ISGGKGGA+DKI+A++++ Sbjct: 269 SFIAGLTAPPGRRMGHAGAIISGGKGGAQDKIDALEKS 306 >gi|12653465|gb|AAH00504.1| SUCLG1 protein [Homo sapiens] gi|48146395|emb|CAG33420.1| SUCLG1 [Homo sapiens] gi|62988720|gb|AAY24107.1| unknown [Homo sapiens] Length = 333 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 181/298 (60%), Positives = 226/298 (75%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 37 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 92 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEK 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 152 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 212 GIGGDPFNGTDFIDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 272 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEK 329 >gi|15618882|ref|NP_225168.1| succinyl-CoA synthetase subunit alpha [Chlamydophila pneumoniae CWL029] gi|15836506|ref|NP_301030.1| succinyl-CoA synthetase subunit alpha [Chlamydophila pneumoniae J138] gi|16752057|ref|NP_445423.1| succinyl-CoA synthetase subunit alpha [Chlamydophila pneumoniae AR39] gi|33242341|ref|NP_877282.1| succinyl-CoA synthetase subunit alpha [Chlamydophila pneumoniae TW-183] gi|4377300|gb|AAD19111.1| Succinyl-CoA Synthetase, Alpha [Chlamydophila pneumoniae CWL029] gi|7189798|gb|AAF38673.1| succinyl-Coa synthetase, alpha chain [Chlamydophila pneumoniae AR39] gi|8979347|dbj|BAA99181.1| succinyl-CoA synthetase, alpha [Chlamydophila pneumoniae J138] gi|33236852|gb|AAP98939.1| succinate-CoA ligase alpha chain [Chlamydophila pneumoniae TW-183] gi|269302764|gb|ACZ32864.1| succinyl-CoA synthetase, alpha subunit [Chlamydophila pneumoniae LPCoLN] Length = 293 Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats. Identities = 160/297 (53%), Positives = 213/297 (71%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M + KNT ++ QG+TGKAG+FHTEQ + Y T VGG+ P KG T W +++PV+ Sbjct: 1 MFHSLSKNTPIITQGITGKAGSFHTEQCLAY-GTNFVGGVTPGKGGTLW----LDLPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK+ T A++I+VPP A +AI+E+ EA I LIVCITEGIPV DM+ V ++ S Sbjct: 56 SVLEAKQATGCRATMIFVPPPYAAEAILEAEEAGIELIVCITEGIPVRDMLEVARVMDNS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +S+LIGPNCPGI+ P CKIGIMPG I G++G++SRSGTLTYEAV+Q +Q +GQS Sbjct: 116 TSQLIGPNCPGIIKPGECKIGIMPGYIHLPGNIGVVSRSGTLTYEAVWQLTQLKIGQSIC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVL+ D TE I+M+GEIGGSAEEEAA +++ KP+V Sbjct: 176 VGIGGDPLNGTSFIDVLQALEEDPYTELILMIGEIGGSAEEEAAAWIQAHC----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAP G+ MGHAGA+ISG G A+ KI ++E+G+ + SPA IG+++ +L Sbjct: 232 AFIAGVTAPKGKRMGHAGAIISGNSGDAKSKIQVLRESGVTVVESPAHIGKTVDAVL 288 >gi|158255600|dbj|BAF83771.1| unnamed protein product [Homo sapiens] Length = 333 Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats. Identities = 181/298 (60%), Positives = 226/298 (75%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 37 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 92 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEK 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 152 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 212 GIGGDPFNGTDFIDCLEIFLDDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 272 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEK 329 >gi|262340829|ref|YP_003283684.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272166|gb|ACY40074.1| succinyl-CoA ligase (ADP-forming) subunit alpha [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 291 Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats. Identities = 172/298 (57%), Positives = 213/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKN KVLVQGLTGK G FHTEQ I Y T +VGG+ P KG + G VPVF Sbjct: 1 MSILIDKNIKVLVQGLTGKEGLFHTEQMINY-GTSIVGGVTPGKGGKTYLG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T N SVI+VP A DAI+ESI A + +IVCITEGIPV DM+ +K L++ Sbjct: 56 TVEEAVKNTGGNVSVIFVPSPFASDAILESIFANVEVIVCITEGIPVSDMIIIKHLLKEK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S LIGPNCPGI++P+ K+GIMP S+F +KG +GI+SRSGTLTYEA Q + G G ST Sbjct: 116 KSCLIGPNCPGIISPEESKVGIMPNSVFRKKGKIGIISRSGTLTYEAADQIVKLGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGD V G +++ELFL D+ TE IVM+GEIGG E EAA+++K K +KPI Sbjct: 176 AVGIGGDSVIGMSIKEIMELFLEDQETECIVMIGEIGGKLEIEAAEWIK---KLNNQKPI 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + F+AG+TAP GRTMGHAGA+I A+ K+N MKE+GI I SPA IG ++ E+L Sbjct: 233 ISFIAGQTAPKGRTMGHAGAIIEKKIETAQVKMNIMKESGIHIVKSPANIGMTVYEVL 290 >gi|56476115|ref|YP_157704.1| succinyl-CoA synthetase subunit alpha [Aromatoleum aromaticum EbN1] gi|56312158|emb|CAI06803.1| Succinyl-CoA synthetase, alpha chain [Aromatoleum aromaticum EbN1] Length = 297 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 156/305 (51%), Positives = 214/305 (70%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHTE+ I Y V G++PKK ++VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTEKCIEYANGKNCFVAGVNPKKAGEKI----LDVPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +AK+ T A SVIYVPP+GA DAI E+ EA++ L +CITEGIPV DM+ V+ +++ Sbjct: 57 YGSVKDAKQATGATVSVIYVPPAGAADAIWEACEADLDLAICITEGIPVRDMLIVRNKMK 116 Query: 119 KS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ Sbjct: 117 QKVAKGGKETLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV+ +F D T++++M+GEIGG E EAAQ+ K Sbjct: 177 IGLGQSSAVGIGGDPINGLKHIDVMRMFNDDPDTDAVIMIGEIGGPDEAEAAQWCKANM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G + +P+ + + Sbjct: 236 ---KKPIVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFTVTRNPSEMAKL 292 Query: 293 LVELL 297 L +L Sbjct: 293 LKAML 297 >gi|325958385|ref|YP_004289851.1| succinyl-CoA synthetase subunit alpha [Methanobacterium sp. AL-21] gi|325329817|gb|ADZ08879.1| succinyl-CoA synthetase, alpha subunit [Methanobacterium sp. AL-21] Length = 286 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 140/295 (47%), Positives = 202/295 (68%), Gaps = 10/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I++D+NT+ +VQG+TGK G+FH EQ + Y T +V G P KG + G +P++ ++ Sbjct: 2 IILDENTRCIVQGITGKQGSFHAEQMLKY-NTNIVAGTSPGKGGQNFNG----LPIYNSI 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EAK+ NAS+I+VP S A DA E+I +++ L V ITE IPV D + + +K ++ Sbjct: 57 EEAKDELDINASIIFVPASFAKDAAFEAI-SQLDLAVIITEHIPVHDSMEIVEYAKKENT 115 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PGI++P K+GIMP IF +G++GI+SRSGTLTYE Q + G+GQST VG Sbjct: 116 IVIGPNTPGIISPGIGKLGIMPTHIFNEGNIGIVSRSGTLTYEVANQVTNAGMGQSTCVG 175 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV G +F DVL+ F D+ T ++VM+GEIGG+AEE AA ++K+ KP++ + Sbjct: 176 IGGDPVVGLDFADVLQRFEDDDDTAAMVMIGEIGGNAEEMAADYIKENIS----KPVIAY 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG TAPPG+ MGHAGA+I G G AE KINA++++G +A P+ I + +L+ Sbjct: 232 IAGVTAPPGKRMGHAGAIIEGDAGTAETKINALEKSGAHVADRPSEIADLIWDLI 286 >gi|210076220|ref|XP_504333.2| YALI0E24013p [Yarrowia lipolytica] gi|199426960|emb|CAG79932.2| YALI0E24013p [Yarrowia lipolytica] Length = 328 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 175/298 (58%), Positives = 223/298 (74%), Gaps = 7/298 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ NTKVL QG TGK GTFH +QAI Y T+VVGG +PKK G +P+F T Sbjct: 30 NLKINSNTKVLFQGFTGKQGTFHAQQAIDY-GTKVVGGTNPKKAGQSHLG----LPIFGT 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + T +AS I+VPP A +I E+IEAE+PL+VCITEGIP DM+RV L+ +S Sbjct: 85 VAEAMKETGCDASAIFVPPPLAAASIEEAIEAELPLVVCITEGIPQHDMIRVVDMLKTQS 144 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMP SI ++G +G++SRSGTLTYEAV QT+Q GLGQS Sbjct: 145 KTRLVGPNCPGIIAPGQCKIGIMPSSIHKRGRIGVVSRSGTLTYEAVNQTTQVGLGQSLV 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK-RGRKKPI 239 VGIGGDP GT FID L++FL DE T+ I+M+GEIGG+AEEEAA FLK + R KP+ Sbjct: 205 VGIGGDPFAGTNFIDCLKVFLEDENTDGIIMIGEIGGTAEEEAADFLKQYNQTREVPKPV 264 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APPGR MGHAGA+ISGGKGGA KI+A++ AG+ + PSPAR+G++L + Sbjct: 265 CSFIAGVSAPPGRRMGHAGAIISGGKGGAGSKISALEAAGVAVEPSPARLGKTLYDEF 322 >gi|189053840|dbj|BAG36098.1| unnamed protein product [Homo sapiens] Length = 333 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 181/298 (60%), Positives = 225/298 (75%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 37 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 92 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEK 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 152 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 212 GIGGDPFNGTDFIDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G + + Sbjct: 272 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTFYKEFEK 329 >gi|303243898|ref|ZP_07330238.1| succinyl-CoA synthetase, alpha subunit [Methanothermococcus okinawensis IH1] gi|302485834|gb|EFL48758.1| succinyl-CoA synthetase, alpha subunit [Methanothermococcus okinawensis IH1] Length = 286 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 138/295 (46%), Positives = 197/295 (66%), Gaps = 10/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NT+ +VQG+TGK G+FHT+ +L C T +V G+ P KG G +PV+ TV Sbjct: 2 ILLDENTRAIVQGITGKQGSFHTK-NMLECGTNIVAGVTPGKGGKEIYG----IPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 AE E+ ANASVI+VP A DA E+I+A I L+V ITE IPV D + + ++ Sbjct: 57 AETVEKHGANASVIFVPAPFAKDAAYEAIDAGIELVVIITEHIPVHDTMDIINYAKQKGV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++IGPN PGI +P K+GI+P + ++G +G++SRSGTLTYE + G GQS+ VG Sbjct: 117 KIIGPNTPGIASPKVGKLGIIPMKVLKEGRIGMVSRSGTLTYEIANELISNGFGQSSCVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP G ++++LE+F D+ T++IVM+GEIGGS EE AA+++K KKP++ + Sbjct: 177 IGGDPTIGLGYVEILEMFENDKDTDAIVMIGEIGGSNEEIAAEYIK-----KMKKPVIAY 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG+TAP G+ MGHAGA+I G G AE K+N +K AG + + I +L E+L Sbjct: 232 IAGQTAPEGKRMGHAGAIIERGVGTAESKMNTLKNAGAHVVRKISEIPSALKEIL 286 >gi|91217713|ref|ZP_01254670.1| Succinyl-CoA ligase, alpha subunit [Psychroflexus torquis ATCC 700755] gi|91184217|gb|EAS70603.1| Succinyl-CoA ligase, alpha subunit [Psychroflexus torquis ATCC 700755] Length = 302 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 154/299 (51%), Positives = 212/299 (70%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K++VQG TG G+FH EQ I Y T VVGG+ P KG T G PVF Sbjct: 12 MSVLVNKNSKIIVQGFTGSEGSFHAEQMIDY-GTNVVGGVTPGKGGTTHLGR----PVFN 66 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A E+ A+ S+I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DM++ ++ Sbjct: 67 TVSDAVEKAGADTSIIFVPPAFAADAIMEAADAGIKVIIAITEGIPVSDMIKASDYIKDK 126 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG +F+KG VGI+S+SGTLTYEA Q +EG G +TA Sbjct: 127 DCRLIGPNCPGVITPGEAKVGIMPGFVFKKGKVGIVSKSGTLTYEAADQVVKEGYGITTA 186 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +E+ + D TE +VM+GEIGG E EAA++ K+ G KKP++ Sbjct: 187 IGIGGDPIIGTTTKEAVEMLVNDPETECVVMIGEIGGQLEAEAAKWYKE---SGSKKPVI 243 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAP GRTMGHAGA++ G + A+ K +K++GI + SPA IG+ + E+L Sbjct: 244 GFIAGETAPAGRTMGHAGAIVGGSEDTAQAKKAILKDSGIHVVDSPAEIGKKVAEVLSK 302 >gi|109452591|ref|NP_003840.2| succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor [Homo sapiens] gi|223634731|sp|P53597|SUCA_HUMAN RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor gi|119619964|gb|EAW99558.1| succinate-CoA ligase, GDP-forming, alpha subunit [Homo sapiens] Length = 346 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 181/298 (60%), Positives = 226/298 (75%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 225 GIGGDPFNGTDFIDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEK 342 >gi|303270809|ref|XP_003054766.1| predicted protein [Micromonas pusilla CCMP1545] gi|226462740|gb|EEH60018.1| predicted protein [Micromonas pusilla CCMP1545] Length = 312 Score = 291 bits (744), Expect = 9e-77, Method: Composition-based stats. Identities = 183/299 (61%), Positives = 228/299 (76%), Gaps = 9/299 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDK+TKVLVQG TGK GTFH++QAI Y T++VGG+ PKKG + G +PVF T Sbjct: 18 AVFVDKDTKVLVQGFTGKNGTFHSQQAIAY-GTRMVGGVTPKKGGSTHLG----LPVFNT 72 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-ARLEKS 120 VAEAK T ANAS IYVPP A AI+E++EAE+ L+VCITEGIP DM+RVK A + +S Sbjct: 73 VAEAKTATGANASAIYVPPPFAAKAILEAVEAELDLVVCITEGIPQHDMIRVKQAMMTQS 132 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I G +G++SRSGTLTYEAV+QT+ GLGQST Sbjct: 133 KTRLIGPNCPGIIKPGECKIGIMPGYIHTPGRIGVVSRSGTLTYEAVYQTTACGLGQSTV 192 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F+ D+ TE I+M+GEIGG+AEEEAA+F+K G KP+V Sbjct: 193 VGIGGDPFNGTNFVDCLEKFVKDDQTEGIIMIGEIGGTAEEEAAEFIKA---SGTTKPVV 249 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA DKI A+K AG+ + PSPA +G ++ ++ Sbjct: 250 SFIAGLTAPPGRRMGHAGAIIAGGKGGAGDKIAALKAAGVTVVPSPAGMGEAMHQIFKE 308 >gi|186475212|ref|YP_001856682.1| succinyl-CoA synthetase subunit alpha [Burkholderia phymatum STM815] gi|184191671|gb|ACC69636.1| succinyl-CoA synthetase, alpha subunit [Burkholderia phymatum STM815] Length = 293 Score = 291 bits (744), Expect = 9e-77, Method: Composition-based stats. Identities = 156/301 (51%), Positives = 209/301 (69%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSS--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T++++M+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVIMIGEIGGPDEANAAYWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M GI + +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLEIMDACGIKVTKNPSEMARLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|9955021|pdb|1EUD|A Chain A, Crystal Structure Of Phosphorylated Pig Heart, Gtp-Specific Succinyl-Coa Synthetase Length = 311 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 218/298 (73%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QG TGK GTFH++QA+ Y V G ++ +PVF TV Sbjct: 15 LYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGT-----TPGKGGKTHLGLPVFNTV 69 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL + Sbjct: 70 KEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGK 129 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 130 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 189 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 190 GIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVVS 249 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MG AGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 250 FIAGLTAPPGRRMGXAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYKEFEK 307 >gi|325105144|ref|YP_004274798.1| succinyl-CoA synthetase, alpha subunit [Pedobacter saltans DSM 12145] gi|324973992|gb|ADY52976.1| succinyl-CoA synthetase, alpha subunit [Pedobacter saltans DSM 12145] Length = 344 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 158/299 (52%), Positives = 212/299 (70%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG GT+H Q I Y TQVVGG+ P KG +++ PVF Sbjct: 55 MSVLVNKDSKVIVQGFTGNEGTYHATQMIEY-GTQVVGGVTPGKGGQ----KHLDRPVFN 109 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ++T A+ S+I+VPP+ A DAI+E+ EA I +IVCITEGIP DM++VK + Sbjct: 110 TVKDAVDQTGADVSIIFVPPAFAADAIMEAAEAGIKVIVCITEGIPTKDMIQVKEYISDK 169 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+T D KIGIMPG IF+KG++G++S+SGTLTYEAV Q + GLG +TA Sbjct: 170 DCRLIGPNCPGIITADEAKIGIMPGFIFKKGNIGVVSKSGTLTYEAVDQVVKAGLGITTA 229 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D T I+M+GEIGG E EAA+++K+ KP+V Sbjct: 230 IGIGGDPIIGTPTKEAVELLMNDPETHGIIMIGEIGGGMEAEAARWIKEH----GTKPVV 285 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA++ G A K+ M+E GI + SPA IG ++ +LL Sbjct: 286 GFIAGQTAPPGRRMGHAGAIVGGADDTAAAKMKIMRECGITVVESPAEIGAAMAKLLAK 344 >gi|297623490|ref|YP_003704924.1| succinyl-CoA synthetase subunit alpha [Truepera radiovictrix DSM 17093] gi|297164670|gb|ADI14381.1| succinyl-CoA synthetase, alpha subunit [Truepera radiovictrix DSM 17093] Length = 312 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 165/303 (54%), Positives = 213/303 (70%), Gaps = 21/303 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV------ 54 MSILV K+TK+LVQG+ G G FH ++++ Y TQVVG +HP + Sbjct: 1 MSILVGKDTKLLVQGI-GNFGRFHADRSVAY-GTQVVGAVHPSRAGQTEVFEGETDHSGV 58 Query: 55 ---------NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI 105 VP+F +V EA E T ANASV++VP A DAI+E+ EA +PL++CITEGI Sbjct: 59 PGRGDTYRAEVPIFFSVKEAVEATGANASVVFVPAPFAADAIMEAAEAGLPLVICITEGI 118 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 P++DMVRVK L +RLIGPNCPG++TP C+IGIMPG I R G +G++SRSGTLTYE Sbjct: 119 PIMDMVRVKRYLADKPTRLIGPNCPGVITPHECRIGIMPGYIHRAGRIGVVSRSGTLTYE 178 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 AV Q +Q GLGQ+TAVGIGGDPV GT F+DVL++F D TE ++M+GEIGG+AEE+AA Sbjct: 179 AVHQLTQNGLGQTTAVGIGGDPVNGTNFVDVLKMFNDDPQTEGVIMIGEIGGTAEEDAAA 238 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 ++ + KP+ GF+AG TAP G+ MGHAGA+ISGGKG A DKI A++ AG+ IAP+ Sbjct: 239 WIASNMQ----KPVAGFIAGTTAPKGKRMGHAGAIISGGKGTAADKIAALEAAGVVIAPT 294 Query: 286 PAR 288 P Sbjct: 295 PTD 297 >gi|255536041|ref|YP_003096412.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Flavobacteriaceae bacterium 3519-10] gi|255342237|gb|ACU08350.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Flavobacteriaceae bacterium 3519-10] Length = 290 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 164/298 (55%), Positives = 217/298 (72%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG GTFH +Q I Y T V+GG+ P KG + G PVF Sbjct: 1 MSVLVNKDSKVVVQGFTGNEGTFHAQQMIEY-GTNVIGGVTPGKGGSEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+E+ E+ AN S+I+VPP+ A DAI+E+ +A I +IVCITEGIPV DMV+VKA + Sbjct: 56 TVSESVEKAGANVSIIFVPPAFAADAIMEAADAGIKVIVCITEGIPVEDMVKVKAYIADR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+T D KIGIMPG +F+KG VGI+S+SGTLTYEA Q + G G STA Sbjct: 116 ETRLIGPNCPGIITSDEAKIGIMPGFVFKKGRVGIVSKSGTLTYEAADQVVKAGYGVSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + LELF+ D T+++VM+GEIGG+ E EAA++ K+ G KP+V Sbjct: 176 IGIGGDPIIGTTTKEALELFINDPETDAVVMIGEIGGNLEAEAARWYKE---SGSTKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + A+ K+ M E GI + SPA IG ++ ++LG Sbjct: 233 GFIAGQTAPKGRTMGHAGAIVGGDEDTAQAKMAIMSENGINVVDSPAEIGATVAKVLG 290 >gi|33593523|ref|NP_881167.1| succinyl-CoA synthetase subunit alpha [Bordetella pertussis Tohama I] gi|33597219|ref|NP_884862.1| succinyl-CoA synthetase subunit alpha [Bordetella parapertussis 12822] gi|33601065|ref|NP_888625.1| succinyl-CoA synthetase subunit alpha [Bordetella bronchiseptica RB50] gi|33572879|emb|CAE42815.1| succinyl-CoA synthetase, alpha chain [Bordetella pertussis Tohama I] gi|33573646|emb|CAE37931.1| succinyl-CoA synthetase, alpha chain [Bordetella parapertussis] gi|33575500|emb|CAE32578.1| succinyl-CoA synthetase, alpha chain [Bordetella bronchiseptica RB50] gi|332382931|gb|AEE67778.1| succinyl-CoA synthetase subunit alpha [Bordetella pertussis CS] Length = 293 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 160/301 (53%), Positives = 212/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRMCREYANGKAAFVAGVNPKKAGEDFEG----VPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + V +AK T A SVIYVPP+GA AI E++EAE+ L++CITEGIPV DM+ VK R++ Sbjct: 57 YANVKDAKADTGATVSVIYVPPAGAAAAIWEAVEAELDLVICITEGIPVRDMLEVKNRMQ 116 Query: 119 K--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S + L+GPNCPG++TPD KIGIMPG I RKG +GI+SRSGTLTYEAV Q ++ GLG Sbjct: 117 AMNSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGIVSRSGTLTYEAVAQVTELGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + +DVL+LF D T++++M+GEIGG E AAQ+ KD K Sbjct: 177 QSSAVGIGGDPINGLKHVDVLKLFNDDPDTDAVIMIGEIGGPDEVNAAQWAKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+ GI +P+ +G+ L + Sbjct: 233 KPVVGFIAGVTAPAGKRMGHAGALISGGADTADAKLEVMEACGIRTTRNPSEMGKLLKSV 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|307595218|ref|YP_003901535.1| succinyl-CoA synthetase subunit alpha [Vulcanisaeta distributa DSM 14429] gi|307550419|gb|ADN50484.1| succinyl-CoA synthetase, alpha subunit [Vulcanisaeta distributa DSM 14429] Length = 294 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 136/297 (45%), Positives = 198/297 (66%), Gaps = 10/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV++NTKVLVQG+TG+ G+ HT+ + Y T+VV G+ P KG G VPVF Sbjct: 3 MAILVNENTKVLVQGITGREGSRHTQYMLQY-GTKVVAGVTPGKGGQTVHG----VPVFD 57 Query: 61 TVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EA + N S+I+VP A D++ E+I+A I LIV ITE IP+ D +R ++ Sbjct: 58 TVEEALRKFPDINTSIIFVPAQFAADSVYEAIDAGIKLIVIITEHIPIHDALRFVNYAKR 117 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRK-GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPG+++P K+GI+P I+ K G VGI+SRSGTLTYE + +Q G+GQS Sbjct: 118 KGVTIIGPNCPGVVSPLRSKVGILPNHIYTKSGPVGIVSRSGTLTYEISYHLTQAGIGQS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT+ ++V+++F D T+ IV++GEIGG+ EE AQ++ KP Sbjct: 178 TVVGIGGDPIIGTDMLEVVKMFEEDPETKYIVVIGEIGGTMEERLAQYI---GSGKVTKP 234 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 +V +++G+TAPPG+ MGHAGA++S G G E K+ A +E + +A +P + + + + Sbjct: 235 VVAYISGRTAPPGKRMGHAGAIVSMGMGSYESKVKAFQEVNVPVAKTPTEVVKLIKQ 291 >gi|78045537|ref|NP_001030254.1| succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor [Bos taurus] gi|223634714|sp|Q58DR8|SUCA_BOVIN RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor gi|61553261|gb|AAX46376.1| succinate-CoA ligase, GDP-forming, alpha subunit [Bos taurus] Length = 346 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 218/298 (73%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VD+NTK++ QG TGK GTFH++QA+ Y V G ++ +PVF TV Sbjct: 50 LYVDRNTKIICQGFTGKQGTFHSQQALEYGTKLVGGT-----TPGKGGKTHLGLPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAE+ L+VCITEGIP DMVRVK +L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAVAAIDEAIEAEVSLVVCITEGIPQQDMVRVKHKLLRQGK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RL+GPNCPG++ P CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLVGPNCPGVINPGECKIGIMPGHIHKKGRVGIVSRSGTLTYEAVHQTTQVGLGQSLCV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 225 GIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKAKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGTTMYKEFEK 342 >gi|21673108|ref|NP_661173.1| succinyl-CoA synthetase, alpha subunit [Chlorobium tepidum TLS] gi|21646181|gb|AAM71515.1| succinyl-CoA synthetase, alpha subunit [Chlorobium tepidum TLS] Length = 300 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 165/304 (54%), Positives = 226/304 (74%), Gaps = 10/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 MS+LV+K+T+++VQG+TG GTFHT Q + Y T VV G+ P KG + G + Sbjct: 1 MSVLVNKDTRLVVQGITGGEGTFHTSQILEY-GTNVVAGVTPGKGGILYNGNEKDQFCRP 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TV EA ++ ANA+VI+VP A DAI+E+ A + +I+CITEGIPV DM++ + Sbjct: 60 VPVFDTVQEAVDKAEANATVIFVPAPFAADAIMEAAAAGLKVIICITEGIPVNDMMKAYS 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 ++ + L+GPNCPG++TP K+GIMPG I +KG++G++SRSGTLTYEAV Q ++ GL Sbjct: 120 YVQAKGAVLVGPNCPGVITPGEAKVGIMPGFIHKKGTIGVVSRSGTLTYEAVHQLTEVGL 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 GQST +GIGGDP+ GT F+D ++LF D+ TE +VM+GEIGGSAEEEAA+++K Sbjct: 180 GQSTCIGIGGDPIIGTRFLDAVKLFAKDDETEGLVMIGEIGGSAEEEAAEYIKKY----F 235 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KKP+VGF+AG+TAPPGR MGHAGA++SGGKG AE+KI AM+ AGI + +PA IG ++++ Sbjct: 236 KKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGTAEEKIKAMEAAGIKVVENPADIGEAMLK 295 Query: 296 LLGS 299 LG Sbjct: 296 ALGR 299 >gi|116198547|ref|XP_001225085.1| hypothetical protein CHGG_07429 [Chaetomium globosum CBS 148.51] gi|88178708|gb|EAQ86176.1| hypothetical protein CHGG_07429 [Chaetomium globosum CBS 148.51] Length = 333 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 166/297 (55%), Positives = 218/297 (73%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKVL QG TGK GTFH +QAI Y T+VVGG +PKK G +PVF Sbjct: 36 NLRINGDTKVLYQGFTGKQGTFHAQQAIDY-GTKVVGGTNPKKAGQTHLG----LPVFAN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V++A + T ANA+ I+VPP A I E+I AE+PL+VCITEGIP DMVR+ + L+ +S Sbjct: 91 VSDAVKETGANATAIFVPPPLAAAGIEEAIAAEVPLVVCITEGIPQHDMVRITSMLKSQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTHAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+M+GEIGGSAEE+AA F+++ KP+V Sbjct: 211 VGIGGDPFSGTNFIDCLKVFLEDPETDGIIMIGEIGGSAEEDAADFIRENNTANGGKPVV 270 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L + Sbjct: 271 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKIKALEAAGVIVERSPAGLGKALRDEF 327 >gi|317484136|ref|ZP_07943066.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6] gi|316924640|gb|EFV45796.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6] Length = 290 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 154/297 (51%), Positives = 203/297 (68%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D ++VLVQG+TG+ G FHTE+ I Y T+VVGG+ P +G G VPVF Sbjct: 1 MSILIDDGSRVLVQGITGREGQFHTERMIRY-GTRVVGGVTPGRGGQSTLG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V +A T A+ SV +VP + A DA E+ EA I L+V I E +PVLDMVRVKA + Sbjct: 56 SVRQAVRETEADVSVAFVPAALAADAACEASEAGIRLVVVIAEHVPVLDMVRVKAFFRER 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPGI++P CK+GIMPG I R G VG++SRSGTLTYEAV Q + GLGQS+ Sbjct: 116 GTLLVGPNCPGIISPGKCKVGIMPGYIHRPGGVGLVSRSGTLTYEAVHQLTAAGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G F+D+L+L+ D TE++ ++GEIGG AEE AA++++ KP+ Sbjct: 176 VGIGGDPIHGLSFVDLLKLYGDDPETEAVCLIGEIGGDAEERAAEYIRSSR---YPKPVF 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG TAPPG+ MGHAGA+ISG G EDKI A +EAG+ + G + + L Sbjct: 233 GFIAGLTAPPGKRMGHAGAIISGTSGRGEDKIAAFEEAGVTVIRELGSFGSVVAQKL 289 >gi|220672696|emb|CAX13903.1| succinate-CoA ligase, GDP-forming, alpha subunit [Danio rerio] gi|220679279|emb|CAX13849.1| succinate-CoA ligase, GDP-forming, alpha subunit [Danio rerio] Length = 324 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 172/299 (57%), Positives = 224/299 (74%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++KNTKV+ QG TGK GTFH++Q++ Y +Q+VGG+ P KG G +PVF + Sbjct: 27 NLYINKNTKVICQGFTGKQGTFHSQQSLDY-GSQLVGGVSPGKGGKTHLG----LPVFNS 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAK+ T A A+VIYVPP A AIIE+I+AE+PL VCITEGIP DMVRVK RL ++ Sbjct: 82 VKEAKDGTGAEATVIYVPPPFAAAAIIEAIDAEMPLAVCITEGIPQQDMVRVKHRLLRQN 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 142 KTRLVGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D TE I+++GEIGG AEE AA++LK KP+V Sbjct: 202 IGIGGDPFNGTNFIDCLEVFLQDPKTEGIILIGEIGGDAEENAAEYLKQHNSGANAKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 262 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTIFKEFEK 320 >gi|146089165|ref|XP_001466253.1| succinyl-CoA synthetase alpha subunit [Leishmania infantum JPCM5] gi|134070355|emb|CAM68692.1| putative succinyl-CoA synthetase alpha subunit [Leishmania infantum JPCM5] gi|321398364|emb|CBZ08768.1| putative succinyl-CoA synthetase alpha subunit [Leishmania infantum JPCM5] gi|322499778|emb|CBZ34852.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 299 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 173/296 (58%), Positives = 219/296 (73%), Gaps = 9/296 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 V+K+TKV+VQG+TGKAGTFHT++A+ Y T+VVGG+ PKK T G VPVF T A Sbjct: 10 WVNKDTKVIVQGMTGKAGTFHTKEAMAY-GTKVVGGVSPKKAGTTALG----VPVFATAA 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSS 122 EA + T A ASV+YVP +I E+++AE+PL+V ITEGIP DM+RVK+ L ++ + Sbjct: 65 EAVKATGATASVLYVPAPSCAASIEEALDAELPLVVVITEGIPQWDMLRVKSMLLSQNKT 124 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ EGLGQS VG Sbjct: 125 RLIGPNCPGIIKPAECKIGIMPGHIHQKGKIGIVSRSGTLTYEAVAQTTAEGLGQSLCVG 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP GT +D L LFL D TE I+++GEIGG+AEEEAA F+K+ KKPIV F Sbjct: 185 IGGDPFNGTNMVDCLRLFLNDPETEGIILIGEIGGTAEEEAADFIKN---SPIKKPIVSF 241 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + G TAPPGR MGHAGA++SGG G A+ K +A++ AG+ I+ SPA +G+ + EL Sbjct: 242 IGGATAPPGRRMGHAGAIVSGGMGTAKGKKDALRAAGVTISDSPAHLGKHMAELFA 297 >gi|325916244|ref|ZP_08178525.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas vesicatoria ATCC 35937] gi|325537538|gb|EGD09253.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas vesicatoria ATCC 35937] Length = 288 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 171/295 (57%), Positives = 214/295 (72%), Gaps = 11/295 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 +++KNTKV+VQG TG+ GTFH Q I Y TQVVGG+ P KG T +++PVF TVA Sbjct: 1 MINKNTKVIVQGFTGQQGTFHATQMIEY-GTQVVGGVTPGKGGTTH----IDLPVFNTVA 55 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS-- 121 +A + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 DAVQSTGADASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRSHPD 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQST + Sbjct: 116 TVLIGPNCPGVITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQSTCI 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K KKP+VG Sbjct: 176 GIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKQFV----KKPVVG 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 F+AG +AP G+ MGHAGA+ SGGKG AE K AM+ AG+ SP +G ++ L Sbjct: 232 FIAGASAPAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAAL 286 >gi|255036670|ref|YP_003087291.1| succinyl-CoA synthetase, alpha subunit [Dyadobacter fermentans DSM 18053] gi|254949426|gb|ACT94126.1| succinyl-CoA synthetase, alpha subunit [Dyadobacter fermentans DSM 18053] Length = 292 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 164/299 (54%), Positives = 219/299 (73%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K++VQG TG G+FH +Q I Y T VVGG+ P KG ++ PVF Sbjct: 1 MSVLVNKNSKIIVQGFTGSEGSFHAQQMIEY-GTNVVGGVTPGKGG----LSHLERPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A T A+ S+I+VPP+ A DAI+E+ +A I +IVCITEGIP DM++ K ++ Sbjct: 56 TVDLAVRATGADVSIIFVPPAFAADAIMEAADAGIGVIVCITEGIPTKDMMQAKEYIKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPGI+T + CK+GIMPG IF+KG++G++S+SGTLTYEAV Q S+ GLGQ+TA Sbjct: 116 NTRLIGPNCPGIITAEECKVGIMPGFIFKKGTIGLVSKSGTLTYEAVDQLSRAGLGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D+ TE+IVM+GEIGGS E +AA ++K G KKP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDDETEAIVMIGEIGGSMEADAAAYIK---STGNKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAP GR MGHAGA+I G AE KI MKE+GI +A SPA IG +++ LG Sbjct: 233 GFIAGQTAPKGRRMGHAGAIIGGADDTAEAKIRIMKESGIFVAESPALIGETMLLALGK 291 >gi|167835577|ref|ZP_02462460.1| succinyl-CoA synthetase subunit alpha [Burkholderia thailandensis MSMB43] Length = 293 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 159/301 (52%), Positives = 210/301 (69%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSS--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AAQ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVVMIGEIGGPDEATAAQWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ +GR L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGIKVTRNPSEMGRLLKAA 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|157870846|ref|XP_001683973.1| succinyl-CoA synthetase alpha subunit [Leishmania major strain Friedlin] gi|157870848|ref|XP_001683974.1| succinyl-CoA synthetase alpha subunit [Leishmania major strain Friedlin] gi|68127040|emb|CAJ05552.1| putative succinyl-CoA synthetase alpha subunit [Leishmania major strain Friedlin] gi|68127041|emb|CAJ05553.1| putative succinyl-CoA synthetase alpha subunit [Leishmania major strain Friedlin] Length = 299 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 173/296 (58%), Positives = 219/296 (73%), Gaps = 9/296 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 V+K+TKV+VQG+TGKAGTFHT++A+ Y T+VVGG+ PKK T G VPVF T A Sbjct: 10 WVNKDTKVIVQGMTGKAGTFHTKEAMAY-GTKVVGGVSPKKAGTTALG----VPVFATAA 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSS 122 EA + T A ASV+YVP +I E+++AE+PL+V ITEGIP DM+RVK+ L ++ + Sbjct: 65 EAVKATGATASVLYVPAPLCAASIEEALDAELPLVVVITEGIPQWDMLRVKSMLLSQNKT 124 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ EGLGQS VG Sbjct: 125 RLIGPNCPGIIKPAECKIGIMPGHIHQKGKIGIVSRSGTLTYEAVAQTTAEGLGQSLCVG 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP GT +D L LFL D TE I+++GEIGG+AEEEAA F+K+ KKPIV F Sbjct: 185 IGGDPFNGTNMVDCLRLFLNDPETEGIILIGEIGGTAEEEAADFIKN---SPIKKPIVSF 241 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + G TAPPGR MGHAGA++SGG G A+ K +A++ AG+ I+ SPA +G+ + EL Sbjct: 242 IGGATAPPGRRMGHAGAIVSGGMGTAKGKKDALRAAGVTISDSPAHLGKHMAELFA 297 >gi|198282729|ref|YP_002219050.1| succinyl-CoA synthetase subunit alpha [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666152|ref|YP_002424923.1| succinyl-CoA synthetase, alpha subunit [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247250|gb|ACH82843.1| succinyl-CoA synthetase, alpha subunit [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518365|gb|ACK78951.1| succinyl-CoA synthetase, alpha subunit [Acidithiobacillus ferrooxidans ATCC 23270] Length = 290 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 172/299 (57%), Positives = 213/299 (71%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ ++T+V+ QG TGK GTFH++QA+ Y T++VGG+ P KG + +++PVF Sbjct: 1 MSILLSRDTRVICQGFTGKQGTFHSQQAVAY-GTRMVGGVTPGKGGSRH----LDLPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A ASVIYVP A DAIIE+ A I LIVCITEGIPV DM+ VK L + Sbjct: 56 TVADAVQDTGAEASVIYVPSPFAADAIIEAAAAGIQLIVCITEGIPVHDMLMVKHYLAGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + RLIGPNCPGI+TP KIGIMPG+I + G VGI+SRSGTLTYEAV QT++ GLGQST Sbjct: 116 AVRLIGPNCPGIITPGQSKIGIMPGAIHQPGRVGIVSRSGTLTYEAVEQTTRLGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G FI+VL LF AD TE IVMVGEIGG EE+AA F++ + KP+V Sbjct: 176 VGIGGDPLIGMSFIEVLALFEADPQTEVIVMVGEIGGRMEEDAAGFIQAHVR----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 FVAG TAP G+ MGHAGA+I GG G A K ++ AG+ SPA +G E+LG Sbjct: 232 AFVAGSTAPRGKRMGHAGAIIDGGAGTAAAKYAVLEAAGVHCVHSPADLGTRAAEVLGR 290 >gi|295134220|ref|YP_003584896.1| succinyl-CoA ligase subunit alpha [Zunongwangia profunda SM-A87] gi|294982235|gb|ADF52700.1| succinyl-CoA ligase subunit alpha [Zunongwangia profunda SM-A87] Length = 290 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 153/298 (51%), Positives = 218/298 (73%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH EQ I Y + VVGG+ P KG +++ PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAEQMIEY-GSNVVGGVTPGKGGQ----KHLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A + T A+ ++I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DMV+ ++ Sbjct: 56 TVSDAVKETGADVTIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMVKASNYIKNK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG +F+KG+VGI+S+SGTLTYEA Q +EGLG +TA Sbjct: 116 DCRLIGPNCPGVITPGEAKVGIMPGFVFKKGTVGIVSKSGTLTYEAADQVVKEGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D+ T++IVM+GEIGG E +AA+++K+ G KKP++ Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDDETKAIVMIGEIGGQLEADAAKWIKEN---GNKKPVI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + A+ K +KE G+ + SPA IG+ + E+LG Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSEDTAQAKKAILKENGVHVVDSPAEIGKKVAEVLG 290 >gi|19115142|ref|NP_594230.1| succinate-CoA ligase alpha subunit [Schizosaccharomyces pombe 972h-] gi|3183164|sp|O13750|SUCA_SCHPO RecName: Full=Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor gi|2330705|emb|CAB11045.1| succinate-CoA ligase alpha subunit [Schizosaccharomyces pombe] Length = 331 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 166/301 (55%), Positives = 214/301 (71%), Gaps = 7/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +++++ +TKV+ QG TGK GTFH + A+ Y T+VVGG +PKK T G PVF T Sbjct: 34 NLMINSDTKVIFQGFTGKQGTFHAQHAMDY-GTKVVGGTNPKKAGTTHLGK----PVFGT 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 + EA + T A+AS ++VPP A AI E+I AE+PLIV ITEGIP DM+RV L+ +S Sbjct: 89 IEEAMKETKADASAVFVPPPLAAGAIEEAIAAEVPLIVAITEGIPQHDMLRVSDILKTQS 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P CKIGIMP I + G +GI+SRSGTLTYEAV QT+Q LGQS Sbjct: 149 KSRLVGPNCPGIIRPGQCKIGIMPSHIHKPGCIGIVSRSGTLTYEAVNQTTQTDLGQSLV 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKPI 239 +GIGGDP GT FID L+LFL D T+ I+++GEIGGSAEE+AA+F++ R KP+ Sbjct: 209 IGIGGDPFPGTNFIDALKLFLDDPNTQGIILIGEIGGSAEEDAAEFIRAANASRSTPKPV 268 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V F+AG TAP GR MGHAGA+++GGKG A K A++ AG+ I+ SPA +G +VE L Sbjct: 269 VSFIAGATAPKGRRMGHAGAIVAGGKGTAAAKFEALEAAGVRISRSPATLGSLIVEELNK 328 Query: 300 L 300 L Sbjct: 329 L 329 >gi|223999547|ref|XP_002289446.1| precursor of synthetase [Thalassiosira pseudonana CCMP1335] gi|220974654|gb|EED92983.1| precursor of synthetase [Thalassiosira pseudonana CCMP1335] Length = 299 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 169/297 (56%), Positives = 213/297 (71%), Gaps = 8/297 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DK+T+V+ QG TGK GTFH+ QAI Y T +VGG+ PKKG G +PVF +V Sbjct: 7 VWIDKDTRVICQGFTGKQGTFHSTQAIEY-GTNMVGGVTPKKGGQEHLG----LPVFDSV 61 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-VKARLEKSS 121 A+A +ASVIYVPP AI+++IE EIPL+V ITEG+P DMVR KA L + Sbjct: 62 ADAVLEVKPDASVIYVPPPYCAAAILDAIENEIPLVVAITEGVPQQDMVRVKKALLSQDK 121 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P CKIGIMPG I + G +G++SRSGTLTYEAV QT+ GLGQST V Sbjct: 122 TRLIGPNCPGIIKPGECKIGIMPGYIHKAGKIGVVSRSGTLTYEAVHQTTVTGLGQSTCV 181 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE F D TE I+M+GEIGGSAEEEAA++ KP+VG Sbjct: 182 GIGGDPFNGTNFIDCLERFRDDPQTEGIIMIGEIGGSAEEEAAEW--WANNGDPNKPVVG 239 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPGR MGHAGA+++GGKGGA +K A++ AGI + SPA++G +++ +G Sbjct: 240 FIAGMTAPPGRRMGHAGAIVAGGKGGANEKFAALEAAGIHVTRSPAQLGTTMMRAMG 296 >gi|260062944|ref|YP_003196024.1| succinyl-CoA synthetase subunit alpha [Robiginitalea biformata HTCC2501] gi|88784512|gb|EAR15682.1| succinyl-CoA synthetase, alpha subunit [Robiginitalea biformata HTCC2501] Length = 290 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 158/298 (53%), Positives = 208/298 (69%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH EQ I Y T VVGG+ P KG G PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAEQMIDY-GTNVVGGVTPGKGGQKHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A+ S+I+VPP+ A DAI+E+ A I +I+ ITEGIPV DM++ + ++ Sbjct: 56 TVQDAVSETGADTSIIFVPPAFAADAIMEAAHAGIKVIITITEGIPVADMIKAHSYVKDR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG++TP K+GIMPG +F KG VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 GSRLIGPNCPGVITPGEAKVGIMPGFVFEKGGVGIVSKSGTLTYEAADQVVRQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + LEL + D TE +VM+GEIGG E EAA++ K+ G KKP+V Sbjct: 176 IGIGGDPIIGTTTREALELLVTDPETECVVMIGEIGGQLEAEAARWYKE---SGSKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G A+ K M+E GI + SPA+IG + E+L Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSDDTAQAKKRIMRECGIHVVDSPAKIGEKVSEVLA 290 >gi|189425774|ref|YP_001952951.1| succinyl-CoA synthetase, subunit alpha [Geobacter lovleyi SZ] gi|189422033|gb|ACD96431.1| succinyl-CoA synthetase, alpha subunit [Geobacter lovleyi SZ] Length = 290 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 167/299 (55%), Positives = 219/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K++K+LVQG+TGK+G FHT+Q Y +Q+V G+ P KG + G +PVF Sbjct: 1 MSILINKDSKILVQGITGKSGLFHTQQCRAY-GSQIVAGVTPGKGGIHIEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + T A S+I+VPP GA DAI+ES EA + L VCITEGIPV DMV +A +S Sbjct: 56 TVAEAVQYTGATISMIFVPPPGAADAILESCEAGLELAVCITEGIPVRDMVIARAVQAQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPGI+TP CK+GIMPG I G +G++SRSGTLTYEAV Q + GLGQST Sbjct: 116 KTLLVGPNCPGIITPGQCKLGIMPGYIHTPGKIGVVSRSGTLTYEAVKQLTDIGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G ++IDVL++F D TE++ M+GEIGG AEEEAA ++K+ KKP+ Sbjct: 176 VGIGGDPIIGMKYIDVLKMFNEDPGTEAVFMIGEIGGGAEEEAAYWIKENM----KKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPG+ MGHAGA+I+GGKG AEDKI ++E G+ ++ SP R+G ++ E L Sbjct: 232 AFIAGSTAPPGKRMGHAGAIITGGKGKAEDKIRTLQECGVTVSTSPPRMGEAMAEALKK 290 >gi|114769505|ref|ZP_01447131.1| succinyl-CoA synthetase alpha subunit [alpha proteobacterium HTCC2255] gi|114550422|gb|EAU53303.1| succinyl-CoA synthetase alpha subunit [alpha proteobacterium HTCC2255] Length = 292 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 140/301 (46%), Positives = 192/301 (63%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +D+ TKV+VQG+TG+ FHT++ I Y T VV G+ P K G VPVF Sbjct: 1 MSIFIDEKTKVIVQGITGRMAKFHTKEMIEY-GTNVVAGVTPGKSGQIVEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A AS+++VPP A D+I+E+ +A I V IT+GIP DM+RVK +++ Sbjct: 56 TVKDAVAATGAEASLVFVPPPFAADSIMEAADAGIKYCVSITDGIPAQDMMRVKRYMKRY 115 Query: 121 S----SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L GPNC G ++P +GIMP I++KG VGI+ RSGTL YEA Q + +G Sbjct: 116 RQENRMVLTGPNCAGTISPGKSFLGIMPPHIYKKGPVGIVGRSGTLGYEAASQLASLDIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+LELF D T+ I ++GEIGG E EAA++++D Sbjct: 176 VSTSVGIGGDPINGSSFRDILELFENDPETKIIALIGEIGGPQEAEAAEYIRDHMS---- 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V +VAG TAP GRTMGHAGA+IS A +K+ + AG+ +A P+ IG ++ L Sbjct: 232 KPVVAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILSAAGVTVAQHPSVIGETIANL 291 Query: 297 L 297 + Sbjct: 292 M 292 >gi|114578451|ref|XP_001164971.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial isoform 1 [Pan troglodytes] Length = 346 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 180/298 (60%), Positives = 225/298 (75%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 225 GIGGDPFNGTDFTDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEK 342 >gi|298244137|ref|ZP_06967943.1| succinyl-CoA synthetase, alpha subunit [Ktedonobacter racemifer DSM 44963] gi|297551618|gb|EFH85483.1| succinyl-CoA synthetase, alpha subunit [Ktedonobacter racemifer DSM 44963] Length = 288 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 154/297 (51%), Positives = 207/297 (69%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+T+V+VQG+TG+ G +HT ++ T VVGG+ P KG G VPVF Sbjct: 1 MSILLDKSTRVIVQGITGREGQYHT-HNMIAAGTTVVGGVTPGKGGQEVEG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+AK RT ANA+ I+VPP+GA DAI E+ A I LIVCITEGIPV+DM R + + Sbjct: 56 TVAQAKARTDANATCIFVPPAGAADAIEEAAYAGIELIVCITEGIPVVDMTRAILAVREK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+ TP KIGI+P +F G VG +SRSGTLTYE V + EGLGQST Sbjct: 116 GATLIGPNCPGLCTPGHGKIGIIPYGMFTPGPVGFISRSGTLTYEVVSLLTNEGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G+ F D L+ F D TE +VM GEIGGS EE+AA++++ + KKP+V Sbjct: 176 IGIGGDPIIGSTFADYLKRFDEDPQTEVVVMCGEIGGSDEEDAAEYIRTQM----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F++G+TAPPG+ MGHAGA++SG G A+ K+ A++ AG+ +A + + + ++L Sbjct: 232 AFISGRTAPPGKRMGHAGAIVSGNTGTAQGKVEALQAAGVPVADTIFDVPALVKQVL 288 >gi|145590010|ref|YP_001156607.1| succinyl-CoA synthetase subunit alpha [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048416|gb|ABP35043.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 297 Score = 290 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 154/305 (50%), Positives = 206/305 (67%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++KNTKV+ QG+TGK G FHTE+ Y V G++PKK N+P+ Sbjct: 1 MSILINKNTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGESI----FNIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 + TV EA ++T A SVIYVPP GA AI E++EA++ ++CITEGIPV DM + Sbjct: 57 YGTVKEAAQQTGATTSVIYVPPPGAAAAIWEAVEADLDFVICITEGIPVRDMLEVRNKMH 116 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K + L+GPNCPGI+TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q + Sbjct: 117 AKEAAGGKKTLLLGPNCPGIITPDELKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLTA 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQSTAVGIGGDP+ G + ID++ +F D T++++M+GEIGG E EAA++ K+ Sbjct: 177 IGLGQSTAVGIGGDPINGLKHIDIMRMFNEDPETDAVIMIGEIGGPDEAEAARWCKENM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + +P+ + Sbjct: 236 ---KKPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAVMEECGFKVTKNPSEMAAL 292 Query: 293 LVELL 297 L +L Sbjct: 293 LKAML 297 >gi|213962729|ref|ZP_03390990.1| succinate-CoA ligase, alpha subunit subfamily [Capnocytophaga sputigena Capno] gi|213954724|gb|EEB66045.1| succinate-CoA ligase, alpha subunit subfamily [Capnocytophaga sputigena Capno] Length = 291 Score = 290 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 159/299 (53%), Positives = 212/299 (70%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K++VQG TG GTFH EQ I Y T +VGGI P KG G PVF Sbjct: 1 MSVLVNKNSKIIVQGFTGSEGTFHAEQMIAY-GTNIVGGITPNKGGQTHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ S+I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DMV+V A ++ Sbjct: 56 TVADAVKATGADVSIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMVKVAAYIKNR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP+ K+GIMPG IF+KG+VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 ECRLVGPNCPGVITPEEAKVGIMPGFIFKKGNVGIVSKSGTLTYEAADQIVRQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D T IVM+GEIGG E EAA+++K G +KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETHCIVMIGEIGGQLEPEAARWIKAN---GNQKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP GRTMGHAGA++ G AE K ++E GI + SPA+IG + E+L Sbjct: 233 SFIAGETAPKGRTMGHAGAIVGGADDTAEAKKRILRECGIHVVDSPAKIGEKVAEILKK 291 >gi|282858270|ref|ZP_06267456.1| succinyl-CoA synthetase subunit alpha [Prevotella bivia JCVIHMP010] gi|282588979|gb|EFB94098.1| succinyl-CoA synthetase subunit alpha [Prevotella bivia JCVIHMP010] Length = 302 Score = 290 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 145/299 (48%), Positives = 202/299 (67%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNT+++VQG+TG+ G+FH + Y T VVGG P KG G +PVF Sbjct: 13 MSILINKNTRLIVQGITGRDGSFHATKMKEY-GTNVVGGTSPGKGGQEVKG----IPVFN 67 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T AN S+I+VP + A DA++E+I+ + L++CITEG+P +D V + + Sbjct: 68 TVKEAVAATKANTSIIFVPAAFAKDAMLEAIDGGVELVICITEGVPTVDAVAAQRYAKLR 127 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPG+++P+ GIMP +IF+KG G++SRSGTLTYE V+ +QEGLGQSTA Sbjct: 128 GVKVIGPNCPGLISPEESMAGIMPTNIFKKGHTGVISRSGTLTYEVVYNLTQEGLGQSTA 187 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDPV G F D+L++F D T+SI ++GEIGG AEE AAQF+K KP+ Sbjct: 188 VGVGGDPVVGLYFEDLLQMFQDDPETDSIALIGEIGGDAEERAAQFIKAHV----TKPVA 243 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F++G+ APPG+ MGHAGA+IS G G A++KI A + G+ +A + I L + L Sbjct: 244 VFISGQQAPPGKQMGHAGAIISSGSGTAKEKIAAFEAVGVPVAKETSEIPMLLKKQLNK 302 >gi|296108875|ref|YP_003615824.1| succinyl-CoA synthetase, alpha subunit [Methanocaldococcus infernus ME] gi|295433689|gb|ADG12860.1| succinyl-CoA synthetase, alpha subunit [Methanocaldococcus infernus ME] Length = 284 Score = 290 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 140/295 (47%), Positives = 203/295 (68%), Gaps = 12/295 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+++ T+ +VQG+TG+ G+FHT++ +L T++VGG+ P KG G VPVF TV Sbjct: 2 ILLNEKTRAIVQGITGRQGSFHTKK-MLEAGTKIVGGVTPGKGGQEVHG----VPVFDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA + T ANASVI+VP A DA+ E++++ I LIV ITE IPV D + E + Sbjct: 57 KEAVDETNANASVIFVPAPFAKDAVFEAMDSGIELIVVITEHIPVHDTMEFVNYAEDYGA 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++IGPN PGI +P K+GI+P + +G+VGI+SRSGTLTYE Q + G ST VG Sbjct: 117 KIIGPNTPGIASPKVGKLGIIPMEVLSEGNVGIVSRSGTLTYEVANQI--KSFGVSTCVG 174 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP+ G ++D+L++F D+ TE++V++GEIGGSAEE AA+++K+ KP++ + Sbjct: 175 IGGDPIVGLSYVDILKMFEEDKETEAVVLIGEIGGSAEERAAEYIKE-----MSKPVIAY 229 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG++AP G+ MGHAGA+I GGKG A+ K+ A+K+AG +A S I + L E+L Sbjct: 230 IAGRSAPEGKRMGHAGAIIEGGKGTAKSKMEALKKAGAYVANSIIDIPKILEEIL 284 >gi|332666698|ref|YP_004449486.1| succinyl-CoA synthetase subunit alpha [Haliscomenobacter hydrossis DSM 1100] gi|332335512|gb|AEE52613.1| succinyl-CoA synthetase, alpha subunit [Haliscomenobacter hydrossis DSM 1100] Length = 290 Score = 290 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 154/299 (51%), Positives = 213/299 (71%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+K+++++VQG TGK GTFH Q + Y +T ++GG+ P KG T PV+ Sbjct: 1 MAVLVNKDSRIIVQGFTGKEGTFHATQMLEY-KTNLIGGVTPGKGGTTHLDK----PVWD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + A+ SVI+VPP+ A DAI+E+ +A I +I+CITEGIPV DMV+VKA + Sbjct: 56 TVEQAVKLGGADVSVIFVPPAFAADAIMEAADAGIKVIICITEGIPVQDMVKVKAYIATR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TPD K GIMPG I +KG++GI+SRSGTLTYEAV Q ++ GLGQST Sbjct: 116 DCRLIGPNCPGVITPDEAKCGIMPGFIHKKGTIGIVSRSGTLTYEAVDQVTKAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE+I+M+GEIGG E EAA++++ KP+V Sbjct: 176 IGIGGDPIVGTSTKEAVELLMNDPETEAIIMIGEIGGGMEAEAARYVQAF----GTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAP GR MGHAGA+I G AE K+ ++E GI + SPA +G ++++ LG Sbjct: 232 GFIAGQTAPKGRKMGHAGAIIGGDDDTAEAKMKILEECGIHVVKSPADLGTTVLKALGR 290 >gi|332883390|gb|EGK03673.1| hypothetical protein HMPREF9456_01740 [Dysgonomonas mossii DSM 22836] Length = 290 Score = 290 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 140/299 (46%), Positives = 209/299 (69%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++++T+++VQG+TG+ G+FHT++ + Y V G + VPVF Sbjct: 1 MSILINESTRLIVQGITGRDGSFHTKKMLEYGTKVVGGT-----TPGKGGTDILGVPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T AN S+I+VP A DAI+E+ +A I LI+CI+EG+P LD+V+ ++ Sbjct: 56 TVADAVKATQANTSIIFVPARFAADAIMEAADAGIELIICISEGVPTLDVVKAHRFVQMK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG+++P+ +GI+PG IF+KG++G++SRSGTLTYE V+ + +GQS+A Sbjct: 116 GAILIGPNCPGLMSPEKSLVGILPGQIFKKGNIGVISRSGTLTYEVVYHLTANSMGQSSA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDPV G F ++LE+ D T++IVM+GEIGG+AEE+AA+++K KP+V Sbjct: 176 IGMGGDPVVGLYFRELLEMLQNDPDTDAIVMIGEIGGNAEEQAAEYIKKHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG++APPG+ MGHAGA+IS G G A +KI A++ AG+ +A P+ I L E L Sbjct: 232 GFIAGQSAPPGKQMGHAGAIISSGSGTAAEKIAALEAAGVQVAKEPSEIPGILKEKLKK 290 >gi|120436119|ref|YP_861805.1| succinyl-CoA ligase subunit alpha [Gramella forsetii KT0803] gi|117578269|emb|CAL66738.1| succinyl-CoA ligase subunit alpha [Gramella forsetii KT0803] Length = 291 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 159/299 (53%), Positives = 216/299 (72%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG GTFH EQ I Y T VVGG+ P KG ++N PVF Sbjct: 1 MSVLVNKDSKVIVQGFTGSEGTFHAEQMIEY-GTNVVGGVTPGKGGQ----KHLNKPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV++A E+T A+ ++I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DMV+ ++ Sbjct: 56 TVSDAVEQTGADVTIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMVKASDYIKDR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG +F+KG VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLIGPNCPGVITPGEAKVGIMPGFVFKKGKVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + DE TE IVM+GEIGG E +AAQ++K G +KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDEETECIVMIGEIGGQLEADAAQWVKQN---GNRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAP GRTMGHAGA++ G + A+ K ++E GI + SPA IG+ + E+L S Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSEDTAQAKKKILRENGIHVVDSPAEIGKKVAEVLNS 291 >gi|116622479|ref|YP_824635.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Candidatus Solibacter usitatus Ellin6076] gi|116225641|gb|ABJ84350.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Candidatus Solibacter usitatus Ellin6076] Length = 288 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 173/297 (58%), Positives = 214/297 (72%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVDKNTKV+VQG TGK GTFH +Q+I Y V G + PVF Sbjct: 1 MSVLVDKNTKVIVQGFTGKEGTFHAQQSIAYGTNVVGGV-----VPGKGGTQQLERPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANASVI+VPP A DAI+E+ +A + L+VCITEGIP LDMV+ A L+ Sbjct: 56 TVEQAVKATGANASVIFVPPPFAADAIMEAADAGVELVVCITEGIPALDMVKAWAFLQGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI++P CKIGIMP SI R+G VG++SRSGTLTYEAV Q ++ G+GQST Sbjct: 116 KTRLIGPNCPGIISPGKCKIGIMPASIHREGHVGVVSRSGTLTYEAVGQLTKLGIGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT F+D LELF AD T +I+M+GEIGG+AEE AA ++K KKP+V Sbjct: 176 IGIGGDPIIGTTFLDALELFNADPDTHAIIMIGEIGGNAEETAAAYVKAHV----KKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GFVAG+TAPPGR MGHAGA+I+GG G AEDKI AM +AGI I +PA +G + L Sbjct: 232 GFVAGQTAPPGRRMGHAGAIIAGGSGKAEDKIAAMADAGITICSTPAELGEKVKSRL 288 >gi|183221439|ref|YP_001839435.1| succinyl-CoA synthetase subunit alpha [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911527|ref|YP_001963082.1| succinyl-CoA synthetase subunit alpha [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776203|gb|ABZ94504.1| Succinyl-CoA synthetase, alpha subunit [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779861|gb|ABZ98159.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 296 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 156/301 (51%), Positives = 208/301 (69%), Gaps = 7/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGG-NVNVPVF 59 M++LVD+NT+V+VQG+TGK G+FH Q + Y T+VV G+ P KG WT + PV Sbjct: 1 MAVLVDENTRVVVQGITGKEGSFHATQMLEY-GTKVVAGVTPGKGGQTWTSEFGKSAPVR 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 T+ +A + ANA+VI+VPP A DAI+E I AEIPL+VCITEGIP DM++V + L Sbjct: 60 NTIKDAMKEDGANAAVIFVPPPFAADAILEGIFAEIPLVVCITEGIPTHDMLKVYSVLRN 119 Query: 120 SSSRLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S ++L+GPNCPG++ P + K+GIMPG I G++GI+SRSGTLTYE+V + GLGQS Sbjct: 120 SKTKLVGPNCPGVINPRYNVKMGIMPGFIHTPGNIGIVSRSGTLTYESVASLTAAGLGQS 179 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDPV G ++ + L D TE IVM+GEIGG++EEEAA ++K KKP Sbjct: 180 TCIGIGGDPVPGMNHVEAVRLLNEDPDTEGIVMIGEIGGTSEEEAAAYIKAHV----KKP 235 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VGF+AG+TAPPG+ MGHAGA+ISGG G A KI AM++AG+ I +G + Sbjct: 236 VVGFIAGQTAPPGKRMGHAGAIISGGMGTATSKIAAMQDAGVSICAHIGEVGEKMKAAFK 295 Query: 299 S 299 Sbjct: 296 K 296 >gi|49901174|gb|AAH76216.1| Succinate-CoA ligase, GDP-forming, alpha subunit [Danio rerio] Length = 324 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 171/299 (57%), Positives = 223/299 (74%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++KNTKV+ QG TGK GTFH++Q++ Y +Q+VGG+ P KG G +PVF + Sbjct: 27 NLYINKNTKVICQGFTGKQGTFHSQQSLDY-GSQLVGGVSPGKGGKTHLG----LPVFNS 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAK+ T A A+VIYVPP A AIIE+I+AE+PL VCITEGIP DMVRVK RL ++ Sbjct: 82 VKEAKDGTGAEATVIYVPPPFAAAAIIEAIDAEMPLAVCITEGIPQQDMVRVKHRLLRQN 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMPG I +KG +GI+SRSGTL YEAV QT+Q GLGQS Sbjct: 142 KTRLVGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLPYEAVHQTTQVGLGQSLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D TE I+++GEIGG AEE AA++LK KP+V Sbjct: 202 IGIGGDPFNGTNFIDCLEVFLQDPKTEGIILIGEIGGDAEENAAEYLKQHNSGANAKPVV 261 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 262 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTIFKEFEK 320 >gi|294339388|emb|CAZ87744.1| Succinyl-CoA ligase [ADP-forming] subunit alpha (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) [Thiomonas sp. 3As] Length = 298 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 155/305 (50%), Positives = 213/305 (69%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 M+IL++++TKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MAILINQDTKVITQGITGKTGQFHTRMCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TVA+AK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ R++ Sbjct: 57 YGTVADAKAATGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVKDMLLVRNRMK 116 Query: 119 KS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TPD KIGIMPG I RKG +GI+SRSGTLTYEAV Q ++ Sbjct: 117 DKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGIVSRSGTLTYEAVAQVTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + ID++ F D T++++M+GEIGGS E EAA++ K Sbjct: 177 LGLGQSSAVGIGGDPINGLKHIDIMRAFNDDPDTDAVIMIGEIGGSDEAEAARWCKAHM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + +P+ +G+ Sbjct: 236 ---KKPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFTVTRNPSEMGKL 292 Query: 293 LVELL 297 L ++L Sbjct: 293 LKQVL 297 >gi|187925264|ref|YP_001896906.1| succinyl-CoA synthetase subunit alpha [Burkholderia phytofirmans PsJN] gi|187716458|gb|ACD17682.1| succinyl-CoA synthetase, alpha subunit [Burkholderia phytofirmans PsJN] Length = 293 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 157/301 (52%), Positives = 211/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAYVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +VAEAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ +KAR+ Sbjct: 57 YASVAEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIELKARMR 116 Query: 119 KS--SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 AKNSKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTAIGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T++++M+GEIGG E AA+++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVIMIGEIGGPDEANAAEWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGIKVTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|212535700|ref|XP_002148006.1| succinyl-CoA synthetase alpha subunit, putative [Penicillium marneffei ATCC 18224] gi|210070405|gb|EEA24495.1| succinyl-CoA synthetase alpha subunit, putative [Penicillium marneffei ATCC 18224] Length = 330 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 172/297 (57%), Positives = 222/297 (74%), Gaps = 8/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ T+V+ QG TGK GTFH EQAI Y T+VVGG +PKK T +++PVF T Sbjct: 35 NLRINSETRVIFQGFTGKQGTFHAEQAIAY-GTKVVGGTNPKKAGTTH----LDLPVFAT 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V++A + T A AS I+VPP A I E+I AEIPL+VCITEGIP DMVR+ L+ + Sbjct: 90 VSDAVKETGATASAIFVPPPLAAAGIEEAIAAEIPLVVCITEGIPQHDMVRITDILKTQD 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 150 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLK E K + KP V Sbjct: 210 VGIGGDPFSGTNFIDCLKVFLEDEETDGIIMIGEIGGSAEEDAAEFLKSENK--KNKPTV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L + Sbjct: 268 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALEAAGVIVERSPASLGKTLRDEF 324 >gi|62185363|ref|YP_220148.1| succinyl-CoA synthetase subunit alpha [Chlamydophila abortus S26/3] gi|62148430|emb|CAH64198.1| succinyl-CoA synthetase alpha chain [Chlamydophila abortus S26/3] Length = 291 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 162/299 (54%), Positives = 215/299 (71%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M + K ++ QG+TGKAG+FHTEQ + Y + VGG+ P KG T ++N+ V+ Sbjct: 1 MFCSLSKKIPIITQGITGKAGSFHTEQCLAY-GSNFVGGVTPGKGGT----KHLNLHVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK+ T A++I+VPP+ A +AIIE+ +A I LIVCITEGIPV DM+ V ++ S Sbjct: 56 SVLEAKQATNCRATMIFVPPAYAAEAIIEAEDAGIELIVCITEGIPVKDMLEVSHVMQHS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPGI+ P +CKIGIMPG I G+VG++SRSGTLTYEAV+Q +Q +GQS Sbjct: 116 SSRLIGPNCPGIIKPGACKIGIMPGYIHLPGNVGVVSRSGTLTYEAVWQLTQRSIGQSVC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FIDVLE F D TE I+M+GEIGGSAEEEAA++++ KP++ Sbjct: 176 IGIGGDPLNGTSFIDVLEEFQHDPQTELILMIGEIGGSAEEEAAEWIQAYC----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG+TAP G+ MGHAGA+ISG G A+ K A++ AG+C+ SPA IG ++ LL S Sbjct: 232 AFIAGETAPKGKRMGHAGAIISGNSGDAKSKKEALRRAGVCVVESPALIGETVETLLRS 290 >gi|315426476|dbj|BAJ48109.1| succinyl-CoA synthetase alpha subunit [Candidatus Caldiarchaeum subterraneum] gi|315427976|dbj|BAJ49566.1| succinyl-CoA synthetase alpha subunit [Candidatus Caldiarchaeum subterraneum] Length = 291 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 145/299 (48%), Positives = 201/299 (67%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+ +T+VLVQG+TG+ G FHT +A+L T+V+ G+ P K G VPV+ Sbjct: 1 MAILVNDDTRVLVQGITGRQGAFHT-RAMLKYGTKVLAGVTPGKSGHSVEG----VPVYN 55 Query: 61 TVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA N S++ VP AGDA+IE+++A I L+V ITE +P+ D ++ Sbjct: 56 SVEEAMANYPEINTSMVMVPAPYAGDAVIEALDAGIKLVVVITEHVPIHDAMKFITYARL 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S ++GPNCPG++TP + K+GIMPG IF+KG VGI+SRSGTLTYE + +GLGQST Sbjct: 116 RGSNIVGPNCPGVITPGAAKVGIMPGHIFKKGVVGIVSRSGTLTYEIAHAITVKGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV G FIDVLE+F DE TE++V++GEIGG EE AA ++ K KP+ Sbjct: 176 CIGIGGDPVVGLNFIDVLEMFRRDEETEAVVLIGEIGGDLEERAADYI---VKTRYPKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AG+TAPP + MGHAGA+IS G G K+ A+ +AG+ +A +P + LV+LL Sbjct: 233 VAYIAGRTAPPEKRMGHAGAIISLGAGDPASKVKALTQAGVHVASTPGEVADKLVQLLK 291 >gi|296157295|ref|ZP_06840131.1| succinyl-CoA synthetase, alpha subunit [Burkholderia sp. Ch1-1] gi|295892631|gb|EFG72413.1| succinyl-CoA synthetase, alpha subunit [Burkholderia sp. Ch1-1] Length = 293 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 157/301 (52%), Positives = 211/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAYVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +VAEAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ +KAR+ Sbjct: 57 YASVAEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIELKARMR 116 Query: 119 KS--SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 AENRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTAIGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T++++M+GEIGG E AA+++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVIMIGEIGGPDEANAAEWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGITVTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|197116659|ref|YP_002137086.1| succinyl-CoA synthetase subunit alpha [Geobacter bemidjiensis Bem] gi|197086019|gb|ACH37290.1| succinyl-CoA synthetase, alpha subunit [Geobacter bemidjiensis Bem] Length = 298 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 165/299 (55%), Positives = 220/299 (73%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+++++VQG+TG++G FHT+Q Y + VV G+ P KG + G +PVF Sbjct: 1 MSILINKSSRIVVQGITGRSGLFHTQQCREY-GSNVVAGVTPGKGGIHIEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + T+AN S+I+VPP GA DAI+E+ A + L VCITEGIPV DMV VKA L++S Sbjct: 56 TVAEAVKYTSANVSMIFVPPPGAADAILEAAAAGLELAVCITEGIPVRDMVPVKAVLQQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP CKIGIMPG I + G +G++SRSGTLTYEAV Q + GLGQST Sbjct: 116 KLRLVGPNCPGVITPGECKIGIMPGHIHKPGKIGVVSRSGTLTYEAVKQLTDMGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G F+DVL++F D TE + M+GEIGG+AEEEAA +++ KKP+ Sbjct: 176 VGIGGDPIIGMNFVDVLKMFNEDPGTEGVFMIGEIGGAAEEEAAVWIQTHM----KKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPG+ MGHAGA+I+GGKG A DKI + E G+ +A SP ++G ++ +GS Sbjct: 232 AFIAGVTAPPGKRMGHAGAIITGGKGKAADKIRTLTECGVTVATSPTKMGEAMQTAMGS 290 >gi|114326717|ref|YP_743874.1| succinyl-CoA synthetase subunit alpha [Granulibacter bethesdensis CGDNIH1] gi|114314891|gb|ABI60951.1| succinyl-CoA synthetase alpha chain [Granulibacter bethesdensis CGDNIH1] Length = 298 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 146/302 (48%), Positives = 198/302 (65%), Gaps = 13/302 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K TK+++QG TG GTFH + I Y T VVGG+ P KG G PVF Sbjct: 1 MSILINKQTKIIIQGFTGDKGTFHGREMIDY-GTNVVGGVTPGKGGQTHLGR----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T A AS+ +V P+ DAI+E +A + LI IT+GIP DM+RVK L + Sbjct: 56 TVEDAVRETGAQASITFVAPAFCADAIMEGADAGLELICTITDGIPAQDMMRVKRYLRRY 115 Query: 121 S----SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 +RL+GPNC GI++P +GIMPG I+++G VGI+SRSGTL YEA Q + G+G Sbjct: 116 QKDRRTRLVGPNCAGIISPGQAMLGIMPGHIYKEGHVGIVSRSGTLGYEAAAQLKELGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L+LF AD T +++M+GEIGG E EAA+++ + Sbjct: 176 VSTSVGIGGDPINGSSFLDHLQLFEADPETHAVLMIGEIGGPQEAEAAKWISENMS---- 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VG+VAG TAP GR MGHAGA+ISG A +K M+ G+ +APSP +G ++ + Sbjct: 232 KPVVGYVAGLTAPKGRRMGHAGAIISGEGDSAAEKSEIMRSYGLTVAPSPGELGSTVAAV 291 Query: 297 LG 298 L Sbjct: 292 LA 293 >gi|114578453|ref|XP_525798.2| PREDICTED: similar to succinate-CoA ligase, GDP-forming, alpha subunit isoform 2 [Pan troglodytes] Length = 371 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 180/295 (61%), Positives = 226/295 (76%), Gaps = 6/295 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 225 GIGGDPFNGTDFTDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ ++ Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKV 339 >gi|119719431|ref|YP_919926.1| succinyl-CoA synthetase, alpha subunit [Thermofilum pendens Hrk 5] gi|119524551|gb|ABL77923.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Thermofilum pendens Hrk 5] Length = 294 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 143/299 (47%), Positives = 194/299 (64%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVD+ T+VLVQG+TGK G HTEQ + Y T++V G+ P KG + G VPV+ Sbjct: 1 MAILVDEKTRVLVQGITGKQGMLHTEQMLRY-GTRIVAGVTPGKGGSTIVG----VPVYN 55 Query: 61 TVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAEA + N S+++VP A DA+ E+++A I +V ITE IPV + + Sbjct: 56 TVAEAVDKHPEINTSIVFVPAPYAPDAVYEALDAGIKKVVVITEHIPVHETIEFVRYALS 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +IGPN PG+++P K+GIMPG F+ G+VG++SRSGTLTYE + G G ST Sbjct: 116 KQAVIIGPNTPGVISPGKSKVGIMPGEYFKPGNVGVVSRSGTLTYEVSLRLLASGFGVST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPV G F DV ELF D+ T +V+VGEIGG+ EE A++ AK KKP+ Sbjct: 176 AVGIGGDPVTGLSFEDVYELFARDDETRLVVLVGEIGGTKEERFAEY---YAKLSSKKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V F+AGK+APPGR MGHAGA++ G +G E K+NA++ +GI +A S I + +L Sbjct: 233 VAFIAGKSAPPGRKMGHAGAIVFGSEGSYESKVNALRRSGIYVAQSLREIAEIVARVLS 291 >gi|297526342|ref|YP_003668366.1| succinyl-CoA synthetase, alpha subunit [Staphylothermus hellenicus DSM 12710] gi|297255258|gb|ADI31467.1| succinyl-CoA synthetase, alpha subunit [Staphylothermus hellenicus DSM 12710] Length = 296 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 140/301 (46%), Positives = 197/301 (65%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M +LV+KNT+VLVQG+TG+ G+FHT+ + Y T++V G+ P KG G VPV+ Sbjct: 1 MGVLVNKNTRVLVQGITGREGSFHTKLMLEY-GTKIVAGVTPGKGGMNVYG----VPVYD 55 Query: 61 TVAEAKERTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EA E +AS+I+VP A DA+ E+I+A+I IV ITEGIPV + + +K Sbjct: 56 TVYEAIENIGEIDASIIFVPAKFASDAVFEAIDADIKTIVVITEGIPVHEELEFVKYAKK 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++ +IGPN PGI+ P KIGIMP +F+ G +G++SRSGTLTYE + ++G G ST Sbjct: 116 KNTVIIGPNTPGIMVPGETKIGIMPAHVFKPGKIGLISRSGTLTYEIARELGKKGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +G+GGDPV G F++ ELF+ D +T ++V++GEIGG AEE A++ + KKP+ Sbjct: 176 VIGLGGDPVTGLNFVEAYELFIKDPSTRAVVLIGEIGGDAEERFAKYYAEL---SMKKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V +VAGKTAPPG+ MGHAGA+IS G G + K A+ +A I +A P+ I L + Sbjct: 233 VAYVAGKTAPPGKRMGHAGAIISMGVGDYQSKKQALLKANIPVAEKPSDIPILLGSVFEK 292 Query: 300 L 300 L Sbjct: 293 L 293 >gi|83699279|dbj|BAE54377.1| succinyl-CoA synthetase alpha subunit [Pelotomaculum thermopropionicum] Length = 290 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 138/298 (46%), Positives = 199/298 (66%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I++D+NT+VLVQG+TG G FHT Q + Y T++V G+ P KG G +PV+ Sbjct: 1 MAIIIDENTQVLVQGITGNQGVFHTRQMLAY-GTKIVAGVTPGKGGATVEG----IPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E +ASV+++P DA ES+EA +P++V +TEG+PV D +++ A ++ Sbjct: 56 SVREACENHRIDASVLFIPAPFTKDAAFESLEAGVPVVVIVTEGVPVHDEIQIVAFAKRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + ++GPN GI + CKIGI P F +G VG++SRSGTLTYE V + GLGQST Sbjct: 116 GAIVLGPNTFGICSSGKCKIGIPPNQYFVEGPVGVVSRSGTLTYETVGNLTANGLGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGD V G FIDVL++F D T+++V++GEIGG+AEE A++++K+ KP+V Sbjct: 176 VGMGGDRVVGLTFIDVLKMFEKDPQTKAVVLLGEIGGNAEETASEYIKE-----MSKPVV 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AGK+APPG+ MGHAGA+I GKG + K+ A+ AG +A P+ I + E LG Sbjct: 231 AFIAGKSAPPGKRMGHAGAIIERGKGTYQGKVEALTAAGAKVATLPSEIPALIKEALG 288 >gi|319779687|ref|YP_004130600.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Taylorella equigenitalis MCE9] gi|317109711|gb|ADU92457.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Taylorella equigenitalis MCE9] Length = 293 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 163/301 (54%), Positives = 211/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TG G FHT Y + V G HPKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGNTGAFHTRMCRDYANGKECFVAGTHPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F V EAKE T A SVIYVPP A AIIE++EAE+ L++CITEGIPV DM+ V+ R++ Sbjct: 57 FAKVKEAKEATGATVSVIYVPPMAAAGAIIEAVEAELDLVICITEGIPVRDMLTVRQRMK 116 Query: 119 K--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S + L+GPNCPG++TPD KIGIMPG I RKG VGI+SRSGTLTYEAV Q ++ G+G Sbjct: 117 DLGSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGKVGIVSRSGTLTYEAVAQVTELGMG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDVL++F D TE+++M+GEIGG E AA++ KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVLKMFNDDPETEAVIMIGEIGGPDEVNAAEWAKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+ GI +P+ +G+ L + Sbjct: 233 KPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLEIMEACGIKTTRNPSEMGKLLKSI 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|329906525|ref|ZP_08274407.1| Succinyl-CoA ligase (ADP-forming) alpha chain [Oxalobacteraceae bacterium IMCC9480] gi|327547281|gb|EGF32127.1| Succinyl-CoA ligase (ADP-forming) alpha chain [Oxalobacteraceae bacterium IMCC9480] Length = 293 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 158/301 (52%), Positives = 212/301 (70%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVVTQGITGKTGQFHTRMCREYANGANCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F VAEAK +T N SVIYVPP+GA AI E++EAE+ L +CITEGIPV DM+ +K R+ Sbjct: 57 FANVAEAKAKTGVNVSVIYVPPAGAAAAIWEAVEAELDLAICITEGIPVRDMMALKDRMA 116 Query: 119 KSSSR--LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 KS S+ L+GPNCPG++TPD KIGIMPG I + G +G++SRSGTLTYEAV Q + GLG Sbjct: 117 KSGSKTLLLGPNCPGLITPDEIKIGIMPGHIHKAGRIGVVSRSGTLTYEAVGQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + ID++ +F D T++++M+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDIMRMFNDDPDTDAVIMIGEIGGPDEANAAYWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K++ M+ GI + +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAQAKLDIMEACGITVTKNPSEMARLLKSM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|217969349|ref|YP_002354583.1| succinyl-CoA synthetase subunit alpha [Thauera sp. MZ1T] gi|217506676|gb|ACK53687.1| succinyl-CoA synthetase, alpha subunit [Thauera sp. MZ1T] Length = 297 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 157/305 (51%), Positives = 214/305 (70%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHTE+ I Y V G++PKK ++VP+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTEKCIEYANGKNCFVAGVNPKKAGEKI----LDVPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +AK+ T A SVIYVPP+GA AI E+ EA++ L +CITEGIPV DM+ V+ R++ Sbjct: 57 YGSVKDAKDATGATVSVIYVPPAGAAAAIWEACEADLDLAICITEGIPVRDMLVVRNRMK 116 Query: 119 KS------SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ Sbjct: 117 QKVAAGGKETLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV+ +F D T++++M+GEIGG E EAAQ+ K Sbjct: 177 IGLGQSSAVGIGGDPINGLKHIDVMRMFNDDPDTDAVIMIGEIGGPDEAEAAQWCKANM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G + +P+ +G+ Sbjct: 236 ---KKPIVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFKVTRNPSEMGKL 292 Query: 293 LVELL 297 L +L Sbjct: 293 LKAML 297 >gi|170693428|ref|ZP_02884587.1| succinyl-CoA synthetase, alpha subunit [Burkholderia graminis C4D1M] gi|170141583|gb|EDT09752.1| succinyl-CoA synthetase, alpha subunit [Burkholderia graminis C4D1M] Length = 293 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 156/301 (51%), Positives = 210/301 (69%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAYVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +VAEAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ +K R+ Sbjct: 57 YASVAEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEIKDRMR 116 Query: 119 KS--SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 RENRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTAIGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T++++M+GEIGG E AA+++K K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVIMIGEIGGPDEANAAEWIK----GNMK 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGIKVTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|300776448|ref|ZP_07086306.1| succinate--CoA ligase (ADP-forming) [Chryseobacterium gleum ATCC 35910] gi|300501958|gb|EFK33098.1| succinate--CoA ligase (ADP-forming) [Chryseobacterium gleum ATCC 35910] Length = 290 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 167/298 (56%), Positives = 214/298 (71%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K++KV+VQG TG GTFH Q I Y T VVGG+ P KG + G PVF Sbjct: 1 MSILVNKDSKVIVQGFTGNEGTFHAGQMIEY-GTNVVGGVTPGKGGSEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A E+ AN S+I+VPP+ A DAI+E+ EA I +IVCITEGIPV DMV+VK+ + Sbjct: 56 TVADAVEKAGANVSIIFVPPAFAADAIMEAAEAGIKVIVCITEGIPVADMVKVKSYIADR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+T + KIGIMPG +F+KG VGI+S+SGTLTYEA Q + G G STA Sbjct: 116 DCRLIGPNCPGIITSEEAKIGIMPGFVFKKGKVGIVSKSGTLTYEAADQVVRAGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + LELF+ D TE++VM+GEIGG E EAA++ K G KP+V Sbjct: 176 IGIGGDPIIGTTTREALELFINDPETEAVVMIGEIGGGLEAEAARWYKA---SGSTKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + A+ K+ M+E GI + SPA IG ++ ++LG Sbjct: 233 GFIAGQTAPKGRTMGHAGAIVGGAEDTAQAKMEIMRENGINVVDSPADIGATVAKILG 290 >gi|9409794|gb|AAD17940.2| succinyl-CoA synthetase alpha subunit [Homo sapiens] Length = 333 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 181/298 (60%), Positives = 226/298 (75%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 37 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTLPGKGGQTHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 92 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEK 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 152 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 212 GIGGDPFNGTDFIDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 271 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 272 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEK 329 >gi|89890686|ref|ZP_01202195.1| succinyl-CoA ligase alpha-chain [Flavobacteria bacterium BBFL7] gi|89516831|gb|EAS19489.1| succinyl-CoA ligase alpha-chain [Flavobacteria bacterium BBFL7] Length = 290 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 157/298 (52%), Positives = 214/298 (71%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIEY-GTNVVGGVTPGKGGQTHLDK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA E+ AN ++I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DMV+ +++ Sbjct: 56 TVSEAVEKVGANVTIIFVPPAFAADAIMEAADAGIEVIITITEGIPVADMVKAADYIKEK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + RL+GPNCPG++TP K+GIMPG +F+KG VGI+S+SGTLTYEA Q ++G G STA Sbjct: 116 NCRLVGPNCPGVITPGEAKVGIMPGFVFKKGKVGIVSKSGTLTYEASDQVVKQGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +ELF+ D TE+IVM+GEIGG E +AAQ++K G KKP++ Sbjct: 176 IGIGGDPIIGTTTKEAVELFMNDPETEAIVMIGEIGGQLEADAAQWIKA---TGNKKPVI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + A+ K M+E+GI + SPA IG+ + E+LG Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSEDTAQAKKAIMRESGIHVVDSPAEIGKKVAEVLG 290 >gi|47210731|emb|CAF89706.1| unnamed protein product [Tetraodon nigroviridis] Length = 311 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 174/299 (58%), Positives = 229/299 (76%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++++TKV+ QG TGK GTFH++Q++ Y +Q+VGG+ P KG G +PVF + Sbjct: 14 NLCINRSTKVICQGFTGKQGTFHSQQSLDY-GSQLVGGVSPGKGGKTHLG----LPVFNS 68 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA ERT A+A+VIYVPP A AIIE+I+AE+PL+VCITEGIP DMV+VK RL +S Sbjct: 69 VKEATERTGADATVIYVPPPYAAAAIIEAIDAEVPLVVCITEGIPQQDMVKVKHRLLRQS 128 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 129 TTRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 188 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D TE I+++GEIGGSAEE AA++LK+ KP+V Sbjct: 189 IGIGGDPFNGTNFIDCLEVFLQDPKTEGIILIGEIGGSAEENAAEYLKEHNSGSNGKPVV 248 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 249 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTIFKEFEK 307 >gi|154338904|ref|XP_001565674.1| succinyl-CoA synthetase alpha subunit [Leishmania braziliensis MHOM/BR/75/M2904] gi|154338906|ref|XP_001565675.1| succinyl-CoA synthetase alpha subunit [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062726|emb|CAM39169.1| putative succinyl-CoA synthetase alpha subunit [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062727|emb|CAM39170.1| putative succinyl-CoA synthetase alpha subunit [Leishmania braziliensis MHOM/BR/75/M2904] Length = 300 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 168/296 (56%), Positives = 215/296 (72%), Gaps = 9/296 (3%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 ++K+TK++VQG+TGKAG+FHT+ A+ Y T+VVGG+ PKK T G VPVF T A Sbjct: 10 WINKDTKLIVQGMTGKAGSFHTKAAMAY-GTKVVGGVSPKKAGTTALG----VPVFATTA 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSS 122 EA + T A ASV+YVP +I E++EAE+PL+V ITEGIP DM+RVK+ L ++ + Sbjct: 65 EAVKATGATASVLYVPAPLCAASIEEALEAEVPLVVVITEGIPQWDMLRVKSMLLSQNKT 124 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQS VG Sbjct: 125 RLIGPNCPGIIKPGECKIGIMPGHIHQKGKIGIVSRSGTLTYEAVAQTTAVGLGQSLCVG 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP GT +D L LFL D TE I+++GEIGG+AEEEAA F+K+ KKP V F Sbjct: 185 IGGDPFNGTNMVDCLRLFLNDPETEGIILIGEIGGTAEEEAADFIKN---SPIKKPTVSF 241 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + G TAPPGR MGHAGA++SGG G A+ K A++ AG+ ++ SPA +G+ + EL Sbjct: 242 IGGATAPPGRRMGHAGAIVSGGMGTAKGKKEALRAAGVTVSDSPAHLGKHMAELFA 297 >gi|195337228|ref|XP_002035231.1| GM14589 [Drosophila sechellia] gi|194128324|gb|EDW50367.1| GM14589 [Drosophila sechellia] Length = 328 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 173/300 (57%), Positives = 230/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLNGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+ T +A+VIYVPP GA AIIE++EAEIPLIVCITEG+P DMV+VK L +S Sbjct: 86 VAEAKKATDPHATVIYVPPPGAAAAIIEALEAEIPLIVCITEGVPQHDMVKVKHALISQS 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLTEYNSGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 266 SFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKEMKRL 325 >gi|238028529|ref|YP_002912760.1| succinyl-CoA synthetase subunit alpha [Burkholderia glumae BGR1] gi|237877723|gb|ACR30056.1| Succinyl-CoA synthase, alpha subunit [Burkholderia glumae BGR1] Length = 293 Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats. Identities = 157/301 (52%), Positives = 209/301 (69%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ VK R+ Sbjct: 57 YASVKEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMR 116 Query: 119 KSS--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 REGRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTALGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T+++VM+GEIGG E AA+++K K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVVMIGEIGGPDEATAAEWIK----GNMK 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ +GR L Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGIKVTRNPSEMGRLLKAA 292 Query: 297 L 297 + Sbjct: 293 I 293 >gi|308512803|gb|ADO33055.1| succinyl-CoA synthetase alpha subunit [Biston betularia] Length = 300 Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats. Identities = 174/300 (58%), Positives = 223/300 (74%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++++ K TKV+VQG TGK GTFH++QA+ Y T +VGG+ PKK T G PVF T Sbjct: 3 NLVLTKATKVIVQGFTGKQGTFHSQQALDY-GTNIVGGVSPKKAGTEHLGK----PVFKT 57 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA E+T +ASVIYVPP GA AI+E+IEAE+PLIVCITEG+P DMVRVK L ++ Sbjct: 58 VREAMEKTQCHASVIYVPPPGAAAAILEAIEAEVPLIVCITEGVPQHDMVRVKHALLRQN 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ PD CKIGIMP ++ + G +G++SRSGTLTYEA QTS GLGQS Sbjct: 118 KSRLVGPNCPGIIAPDQCKIGIMPAAVHKAGMIGVVSRSGTLTYEACHQTSLTGLGQSLC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG+AEE A+++L + KP+V Sbjct: 178 VGIGGDPFNGTDFIDCLEVFLKDPNTKGIIVIGEIGGNAEELASEYLIQHNTGQKAKPVV 237 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPGR MGHAGA+ISGGKGGA DKI A+++A + + SPA++G L + + L Sbjct: 238 SFIAGLTAPPGRRMGHAGAIISGGKGGAMDKIKALEKANVIVTRSPAKMGVELHKEMKRL 297 >gi|296242754|ref|YP_003650241.1| succinyl-CoA synthetase subunit alpha [Thermosphaera aggregans DSM 11486] gi|296095338|gb|ADG91289.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Thermosphaera aggregans DSM 11486] Length = 289 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 132/294 (44%), Positives = 192/294 (65%), Gaps = 9/294 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M IL+ +NT+V+VQG+TGK G+FHT+ + Y T++V G P K G VPV+ Sbjct: 1 MGILLSRNTRVIVQGVTGKEGSFHTKLMLEY-GTRIVAGTSPGKKGQTVHG----VPVYN 55 Query: 61 TVAEAKERTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV E +AS+I+VP A DA+ E+I+ + L+V ITEGIP+ D ++ + Sbjct: 56 TVGEIVRDHGEIDASIIFVPAKFAPDAVYEAIDNGVKLVVVITEGIPLHDELKFVNYARR 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GPN PG++TP K+GIMP +F G VGI+SRSGTLTYE + ++ GLG ST Sbjct: 116 KGVIIVGPNTPGLMTPGEAKLGIMPSHVFVPGGVGIVSRSGTLTYEVARELAKHGLGVST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +G+GGDPV G +FI+V ++F D +T+++V++GEIGG AEE +++ KKP+ Sbjct: 176 VIGLGGDPVTGLDFIEVYDMFSNDPSTKAVVLIGEIGGDAEERFSKYYASLR---VKKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 V ++AG+TAPPG+ MGHAGA+IS G G K A++EAGI +A +P++I L Sbjct: 233 VAYIAGRTAPPGKRMGHAGAIISMGIGDYPSKRRALEEAGIPVAETPSQIPLLL 286 >gi|45358518|ref|NP_988075.1| succinyl-CoA synthetase subunit alpha [Methanococcus maripaludis S2] gi|44921276|emb|CAF30511.1| succinate--CoA ligase (ADP-forming); alpha subunit [Methanococcus maripaludis S2] Length = 288 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 133/297 (44%), Positives = 196/297 (65%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M IL+D+NT+ +VQG+TG G FHT+ +L C+T ++ G+ P KG G VPV+ Sbjct: 1 MLILLDENTRAIVQGITGNQGRFHTK-NMLECKTNLLAGVTPGKGGQDVYG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV E E+ ANAS+I++P DA E+I+A + L+ ITE IP+ D + + A +K Sbjct: 56 TVLETVEKYDANASLIFIPAPFVKDAAYEAIDAGVELVTIITEHIPIQDSMDIVAYGKKH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPN PG+ +P K+GI+P SI ++G++G++SRSGTLTYE Q + GQS+ Sbjct: 116 GVNIIGPNTPGLASPKVGKLGIIPMSILKEGNIGMVSRSGTLTYEIASQLTLSNYGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV G +I+VLE+F D T+++VMVGEIGG+AEE+AA+ + KKP++ Sbjct: 176 VGIGGDPVTGLRYIEVLEMFENDPETDAVVMVGEIGGNAEEDAAKKM----ISKMKKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG++AP G+ MGHAGA+I G G A+ K+ A++ AG +A + I L E++ Sbjct: 232 SYIAGQSAPEGKRMGHAGAIIEKGVGTAKSKMQALENAGAHVAKRISDIPLLLKEII 288 >gi|126465379|ref|YP_001040488.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Staphylothermus marinus F1] gi|126014202|gb|ABN69580.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Staphylothermus marinus F1] Length = 293 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 139/301 (46%), Positives = 196/301 (65%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M +LV+KNT+VLVQG+TG+ G+FHT+ + Y T++V G+ P KG G VPV+ Sbjct: 1 MGVLVNKNTRVLVQGITGREGSFHTKLMLEY-GTKIVAGVTPGKGGMNVYG----VPVYD 55 Query: 61 TVAEAKERTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 T+ EA E +AS+I+VP A DA+ E+I+A+I IV ITEGIPV + + +K Sbjct: 56 TIYEAVENIGEIDASIIFVPAKFASDAVFEAIDADIKTIVVITEGIPVHEELEFVRYAKK 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +IGPN PGI+ P KIGIMP +F+ G++G++SRSGTLTYE + ++G G ST Sbjct: 116 KNITIIGPNTPGIMVPGETKIGIMPAHVFKPGNIGLISRSGTLTYEIAREIGKKGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +G+GGDPV G FI+ +LF D T+++V++GEIGG AEE A++ + KKP+ Sbjct: 176 VIGLGGDPVTGLNFIEAYDLFAKDPITKAVVLIGEIGGDAEERFAKYYAEL---PVKKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V ++AGKTAPPG+ MGHAGA+IS G G K A+ +A I +A P+ I L +L Sbjct: 233 VAYIAGKTAPPGKRMGHAGAIISMGMGDYRSKKQALLKANIPVAEKPSDIPILLSSVLEK 292 Query: 300 L 300 L Sbjct: 293 L 293 >gi|223937438|ref|ZP_03629343.1| succinyl-CoA synthetase, alpha subunit [bacterium Ellin514] gi|223893989|gb|EEF60445.1| succinyl-CoA synthetase, alpha subunit [bacterium Ellin514] Length = 296 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 165/304 (54%), Positives = 218/304 (71%), Gaps = 15/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV TK+LVQG+TG G HT+ ++ Y +QVV G+ P KG + VP+F Sbjct: 1 MSILVTPTTKILVQGITGSFGAKHTQLSLAY-GSQVVAGVTPGKGGQLFENK---VPIFD 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + T A S I+VPP A DAI+E+++A + L VCITEGIPV DMV+VK ++ S Sbjct: 57 TVAEAAKLTGATVSAIFVPPPFAADAILEAVDAGLDLAVCITEGIPVNDMVKVKRAMQGS 116 Query: 121 SSRLIGPNCPGILTPDS-------CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +RLIGPNCPG++TP C+IGI PG I +KG++G++SRSGTLTYEAV+Q + Sbjct: 117 KTRLIGPNCPGLVTPGEGKDSHGGCRIGIAPGYIHKKGNIGVVSRSGTLTYEAVWQLTCR 176 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G+GQST VGIGGDPV GT +D++++F D T I+M+GEIGGSAEEEAA+++K Sbjct: 177 GVGQSTCVGIGGDPVNGTSHLDIVKMFNDDPETHGIIMIGEIGGSAEEEAAEWIKKNC-- 234 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KKP+ GF+AG TAPPGR MGHAGA++SGGKG A KI A KEAGI IA +P+ + +L Sbjct: 235 --KKPVAGFIAGATAPPGRRMGHAGAIVSGGKGTAAAKIAAFKEAGIGIAATPSEMADTL 292 Query: 294 VELL 297 ++++ Sbjct: 293 LKMM 296 >gi|83952286|ref|ZP_00961018.1| succinyl-CoA synthetase alpha subunit [Roseovarius nubinhibens ISM] gi|83837292|gb|EAP76589.1| succinyl-CoA synthetase alpha subunit [Roseovarius nubinhibens ISM] Length = 294 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 136/303 (44%), Positives = 194/303 (64%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKN+KVLV GLTG+ G+FH ++ Y T VVGG+ P KG G +PVF Sbjct: 1 MAILIDKNSKVLVTGLTGRIGSFHAQEMRDY-GTNVVGGVTPGKGGMVHNG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A T A+ + +VPP A D+I+E+ +A I +CI +GIP DM+RVK + + Sbjct: 56 TVKGAVAETGADMVIAFVPPPFAADSIMEAADAGIRTCICIADGIPTQDMIRVKRYMRRY 115 Query: 121 S----SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 RLIGPNC GI+TP G+MP I+ G VGI+ RSGTL YEA Q G+G Sbjct: 116 KAENRMRLIGPNCAGIITPGQGFAGLMPPHIYLPGRVGIIGRSGTLGYEAASQMKARGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+++GIGGDP+ G+ F D+LELF D T+++V+VGEIGG E EAA++++D Sbjct: 176 VSSSIGIGGDPINGSSFRDILELFENDPETDAVVLVGEIGGPQEAEAAEYIRDHM----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+ ++AG +AP GR MGHAGA++S A++K+ +K+ G+ I P+P+ G ++ + Sbjct: 232 KPVAAYIAGLSAPKGRRMGHAGAIVSAFGESAQEKVEILKDCGVTIVPTPSAFGEAVETM 291 Query: 297 LGS 299 L + Sbjct: 292 LAA 294 >gi|327405863|ref|YP_004346701.1| succinyl-CoA synthetase subunit alpha [Fluviicola taffensis DSM 16823] gi|327321371|gb|AEA45863.1| succinyl-CoA synthetase, alpha subunit [Fluviicola taffensis DSM 16823] Length = 292 Score = 288 bits (736), Expect = 8e-76, Method: Composition-based stats. Identities = 162/298 (54%), Positives = 214/298 (71%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+KV+VQG TG GTFH Q I Y T VVGG+ P KG + +++ PVF Sbjct: 1 MSVLVNKNSKVIVQGFTGSEGTFHAGQMIEY-GTNVVGGVTPGKGGS----SHLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A +T A+ S+I+VPP+ A DAI+E+ A I +IVCITEGIPV DMV+ K L+ S Sbjct: 56 TVADAVAKTGADVSIIFVPPAFAADAIMEAANAGIKVIVCITEGIPVNDMVKAKEYLKGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++T K+GIMPG +F+KG +GI+S+SGTLTYEA Q ++ GLG +TA Sbjct: 116 GARLIGPNCPGVITAGEAKVGIMPGFVFKKGKIGIVSKSGTLTYEAADQVAKAGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE IVM+GEIGGS E AA+++K+ KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETEGIVMIGEIGGSLEAIAARWIKEH----GTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G AE K M+E GI + SPA+IG + E+LG Sbjct: 232 GFIAGETAPKGRTMGHAGAIVGGDDDTAEAKKRIMRECGIHVVDSPAQIGAKMAEILG 289 >gi|325969472|ref|YP_004245664.1| succinyl-CoA synthetase, subunit alpha [Vulcanisaeta moutnovskia 768-28] gi|323708675|gb|ADY02162.1| succinyl-CoA synthetase, alpha subunit [Vulcanisaeta moutnovskia 768-28] Length = 292 Score = 288 bits (736), Expect = 8e-76, Method: Composition-based stats. Identities = 131/297 (44%), Positives = 197/297 (66%), Gaps = 10/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV++NTKVLVQG+TG G+ H + + Y T+VV G+ P KG G +PVF Sbjct: 1 MAILVNENTKVLVQGITGNEGSRHAQYMLQY-GTKVVAGVTPGKGGQTVQG----IPVFD 55 Query: 61 TVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV +A + N S+I+VP A D++ E+I+A I L+V ITE IP+ D +R ++ Sbjct: 56 TVEDALRKFPDINTSIIFVPARFASDSVYEAIDAGIKLVVIITEHIPIHDALRFVNYSKR 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRK-GSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +IGPNCPG+++P K+GI+P I+ K G VGI+SRSGTLTYE + +Q G+GQS Sbjct: 116 KGTTIIGPNCPGVVSPLKSKVGILPNHIYTKSGPVGIVSRSGTLTYEISYHLTQAGIGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT+ ++++++F D T+ IV++GEIGG+ EE AQ++ KP Sbjct: 176 TVVGIGGDPIIGTDMLEIVKMFEEDPETKYIVVIGEIGGTMEERLAQYI---GSGKVTKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 +V +++G+TAPPG+ MGHAGA++S G G E K+ A +E + +A +P + + + + Sbjct: 233 VVAYISGRTAPPGKRMGHAGAIVSMGMGSYESKVKAFQEVNVPVARTPTEVVKLIKQ 289 >gi|296223417|ref|XP_002757610.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial-like [Callithrix jacchus] Length = 346 Score = 288 bits (736), Expect = 8e-76, Method: Composition-based stats. Identities = 181/298 (60%), Positives = 226/298 (75%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLHQGK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 225 GIGGDPFNGTDFIDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEK 342 >gi|301065030|ref|ZP_07205375.1| succinyl-CoA synthetase, alpha subunit [delta proteobacterium NaphS2] gi|300440879|gb|EFK05299.1| succinyl-CoA synthetase, alpha subunit [delta proteobacterium NaphS2] Length = 291 Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 163/300 (54%), Positives = 216/300 (72%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD ++V+VQG+TG+ GTFHT+Q + Y T VVGG+ P KG G VPVF Sbjct: 1 MSILVDDKSRVVVQGITGREGTFHTKQMLAY-GTSVVGGVTPGKGGQVAEG----VPVFH 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V +A ER A+ S I+VPP A DA++E+ + I +IVCITEGIP LDMV+V L+ Sbjct: 56 SVRDAVEREGADVSCIFVPPPFAADAVMEAAASGIKVIVCITEGIPTLDMVKVDRFLKDR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPGI++P K+GIMPG I R G +G++SRSGTLTYE V Q + GLGQST Sbjct: 116 DVVLIGPNCPGIISPGKTKVGIMPGDIHRPGRMGVISRSGTLTYEVVGQLTGVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G+ FID L F D T +V++GEIGG+AEEEAA+++K KP+ Sbjct: 176 IGIGGDPIIGSSFIDHLNRFKDDPETNGVVLIGEIGGTAEEEAAEYIKA----SFSKPVT 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AGKTAPPG+ MGHAGA+I+GGKG A+DKI A+K AGI +APS A +G+++++++G + Sbjct: 232 AFIAGKTAPPGKRMGHAGAIIAGGKGKAQDKIKALKAAGIAVAPSLAELGKTVLKVMGRI 291 >gi|28574296|ref|NP_523905.2| succinyl coenzyme A synthetase alpha subunit, isoform A [Drosophila melanogaster] gi|320545545|ref|NP_001189044.1| succinyl coenzyme A synthetase alpha subunit, isoform B [Drosophila melanogaster] gi|195587550|ref|XP_002083524.1| GD13780 [Drosophila simulans] gi|41019545|sp|Q94522|SUCA_DROME RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor gi|19528345|gb|AAL90287.1| LD24889p [Drosophila melanogaster] gi|28380437|gb|AAF47796.2| succinyl coenzyme A synthetase alpha subunit, isoform A [Drosophila melanogaster] gi|194195533|gb|EDX09109.1| GD13780 [Drosophila simulans] gi|220953812|gb|ACL89449.1| Scsalpha-PA [synthetic construct] gi|318069129|gb|ADV37481.1| succinyl coenzyme A synthetase alpha subunit, isoform B [Drosophila melanogaster] Length = 328 Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 173/300 (57%), Positives = 230/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLNGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+ T +A+VIYVPP GA AIIE++EAEIPLIVCITEG+P DMV+VK L +S Sbjct: 86 VAEAKKATDPHATVIYVPPPGAAAAIIEALEAEIPLIVCITEGVPQHDMVKVKHALISQS 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLTEYNSGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 266 SFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKEMKRL 325 >gi|295677588|ref|YP_003606112.1| succinyl-CoA synthetase, alpha subunit [Burkholderia sp. CCGE1002] gi|307730897|ref|YP_003908121.1| succinyl-CoA synthetase subunit alpha [Burkholderia sp. CCGE1003] gi|295437431|gb|ADG16601.1| succinyl-CoA synthetase, alpha subunit [Burkholderia sp. CCGE1002] gi|307585432|gb|ADN58830.1| succinyl-CoA synthetase, alpha subunit [Burkholderia sp. CCGE1003] Length = 293 Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 156/301 (51%), Positives = 210/301 (69%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAYVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +VAEAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ +K R+ Sbjct: 57 YASVAEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEIKDRMR 116 Query: 119 KS--SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 RENRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTAIGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T++++M+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVIMIGEIGGPDEANAAHWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGIKVTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|117927590|ref|YP_872141.1| succinyl-CoA synthetase subunit alpha [Acidothermus cellulolyticus 11B] gi|117648053|gb|ABK52155.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Acidothermus cellulolyticus 11B] Length = 295 Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 138/299 (46%), Positives = 199/299 (66%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I VD+ ++V+VQG+TG G+ HT Q +L T +VGG +P+K T+ +V +PVF Sbjct: 1 MAIFVDRTSRVIVQGITGSEGSKHT-QRMLRAGTTIVGGTNPRKAGTFVEFDDVKLPVFA 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A T A+ +V +VPP+GA A++E+I+A IPL+V ITEGIPV D + A + Sbjct: 60 TVADAMAETGADVAVGFVPPAGAKAAMLEAIDAGIPLLVVITEGIPVHDTMYAWAYAARR 119 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPGI +P +GI+P I G +G++S+SGTLTY+ +F+ +G S Sbjct: 120 GHRTRIIGPNCPGITSPGQSNVGIIPADITEPGRIGLVSKSGTLTYQMMFELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID L F D T+ IVM+GEIGG AEE AA ++ + KP Sbjct: 178 TCVGIGGDPIIGTTHIDCLRAFQEDPETDVIVMIGEIGGDAEELAAAYIAEHV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG+VAG TAP G+TMGHAGA+ISG G A+ K A++ G+ + +P++ + + E++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIISGSAGTAQAKKEALERVGVRVGRTPSQTAQLVREIM 292 >gi|323527260|ref|YP_004229413.1| succinyl-CoA synthetase subunit alpha [Burkholderia sp. CCGE1001] gi|323384262|gb|ADX56353.1| succinyl-CoA synthetase, alpha subunit [Burkholderia sp. CCGE1001] Length = 293 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 156/301 (51%), Positives = 210/301 (69%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAYVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +VAEAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ +K R+ Sbjct: 57 YASVAEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEIKDRMR 116 Query: 119 KS--SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 RENRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTAIGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T++++M+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVIMIGEIGGPDEANAAYWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGIKVTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|302553655|ref|ZP_07305997.1| succinyl-CoA synthetase subunit alpha [Streptomyces viridochromogenes DSM 40736] gi|302471273|gb|EFL34366.1| succinyl-CoA synthetase subunit alpha [Streptomyces viridochromogenes DSM 40736] Length = 294 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 138/300 (46%), Positives = 195/300 (65%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KV+VQG+TG G HT++ +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKESKVIVQGMTGSEGQKHTKR-MLASGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 +V EA E+T A+ SVI+VP DA++E+I+AEIPL V ITEGI V D A + Sbjct: 60 SVKEAIEKTGADVSVIFVPEKFTKDAVVEAIDAEIPLAVVITEGIAVHDTASFWAYAGKK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R++GPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIVGPNCPGLITPGQSNAGIIPADITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA F+K+ KP Sbjct: 178 TCVGIGGDPIIGTTHIDALKAFQDDPDTDLIVMIGEIGGDAEERAAAFIKENV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P + E+L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAKLAREILA 293 >gi|262198320|ref|YP_003269529.1| succinyl-CoA synthetase, subunit alpha [Haliangium ochraceum DSM 14365] gi|262081667|gb|ACY17636.1| succinyl-CoA synthetase, alpha subunit [Haliangium ochraceum DSM 14365] Length = 293 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 168/299 (56%), Positives = 218/299 (72%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV +T+++VQG+TG AG FHT QA+ Y T VV G+ P K G VPVF Sbjct: 1 MSVLVGNDTRLVVQGMTGSAGAFHTRQAMEY-GTNVVAGVTPGKKGAKVEGLEK-VPVFD 58 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 + EA ANASV+YVPP A DAI+E+ A IPLI+ ITEGIP DM+RVK L + Sbjct: 59 SCEEAVREAGANASVVYVPPPFAADAIMEAAAAGIPLIIAITEGIPAHDMIRVKTMLAAD 118 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 ++ LIGPNCPGI+TP+ CKIGIMPG I +KG+VG++SRSGTLTYE V Q S GLGQS Sbjct: 119 HPNTVLIGPNCPGIITPEECKIGIMPGYIHKKGNVGVVSRSGTLTYEVVHQLSALGLGQS 178 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDPVKG +FI+ ++LF D TE+I ++GEIGGS+EE+AA ++K+ KKP Sbjct: 179 TAIGIGGDPVKGLDFIECVKLFNEDPETEAIFLIGEIGGSSEEDAAAYIKEHV----KKP 234 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + F+AG+TAPPG+ MGHAGA+ISGGKG A KI A++ A I ++P+PA +G +L ++L Sbjct: 235 VAAFIAGQTAPPGKRMGHAGAIISGGKGTASAKIEALQAANIAVSPTPAEMGTTLQKIL 293 >gi|332531167|ref|ZP_08407080.1| succinyl-CoA synthetase subunit alpha [Hylemonella gracilis ATCC 19624] gi|332039274|gb|EGI75687.1| succinyl-CoA synthetase subunit alpha [Hylemonella gracilis ATCC 19624] Length = 297 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 156/305 (51%), Positives = 214/305 (70%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++KNTKV+ QG+TGK G FHTE+ Y V G++PKK N+P+ Sbjct: 1 MSIYINKNTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGESI----FNIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EA ++T A SVIYVPP+GA DAI E++EA++ L +CITEGIPV DM+ V+ +++ Sbjct: 57 YASVKEAAKQTGATVSVIYVPPAGAADAIWEAVEADLDLAICITEGIPVRDMLVVRNKMK 116 Query: 119 KSS------SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + + L+GPNCPG++TPD KIGIMPG I +KG VG++SRSGTLTYEAV Q S+ Sbjct: 117 EKEAKGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRVGVVSRSGTLTYEAVAQLSE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+GQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAA++ K Sbjct: 177 LGIGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAARWCKANM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + +P+ +G+ Sbjct: 236 ---KKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFKVTRNPSEMGKL 292 Query: 293 LVELL 297 L +L Sbjct: 293 LKAML 297 >gi|256824635|ref|YP_003148595.1| succinyl-CoA synthetase subunit alpha [Kytococcus sedentarius DSM 20547] gi|256688028|gb|ACV05830.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Kytococcus sedentarius DSM 20547] Length = 297 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 144/302 (47%), Positives = 203/302 (67%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 M+I ++ ++KV+VQG+TG G HT Q +L T VVGG++PKK T G +VPVF Sbjct: 1 MAIFLNNDSKVIVQGMTGSEGMKHT-QRMLTSGTNVVGGVNPKKAGTEVEFEGGTSVPVF 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA E T AN SV++VPP + DA++E++EAEI L V ITEGIPV D A +K Sbjct: 60 GSVKEAMEATGANVSVLFVPPKFSKDAVLEAVEAEIELAVVITEGIPVQDSAEFWAEAKK 119 Query: 120 SS-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI++P GI+P +I G +G++S+SGTLTY+ +++ G S Sbjct: 120 AGKTRIIGPNCPGIISPGQSNAGIIPANIAEGGRIGLVSKSGTLTYQMMYELRD--FGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID LE F D+ T++IVM+GEIGG AEE AA ++K+ KP Sbjct: 178 TAIGIGGDPIVGTTHIDALEAFQNDDETDAIVMIGEIGGDAEERAADYIKEHV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G AE K A++ G+ + +P++ + E++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAEAKKEALEAVGVKVGKTPSQTADLMREIMK 293 Query: 299 SL 300 L Sbjct: 294 GL 295 >gi|194749361|ref|XP_001957107.1| GF24225 [Drosophila ananassae] gi|190624389|gb|EDV39913.1| GF24225 [Drosophila ananassae] Length = 328 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 173/300 (57%), Positives = 229/300 (76%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLTSDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+ T +A+VIYVPP GA AIIE++EAEIPLIVCITEG+P DMV+VK L +S Sbjct: 86 VAEAKKATDPHATVIYVPPPGAAAAIIEALEAEIPLIVCITEGVPQHDMVKVKHALISQS 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLTEYNSGIKAKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA+ISGGKGGA DKI A+++AG+ + SPA++G L + + L Sbjct: 266 SFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKEMKRL 325 >gi|91785105|ref|YP_560311.1| succinyl-CoA synthetase subunit alpha [Burkholderia xenovorans LB400] gi|91689059|gb|ABE32259.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Burkholderia xenovorans LB400] Length = 293 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 157/301 (52%), Positives = 210/301 (69%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAYVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +VAEAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ +KAR+ Sbjct: 57 YASVAEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIELKARMR 116 Query: 119 KS--SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 AENRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTAIGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T++++M+GEIGG E AA ++KD K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPETDAVIMIGEIGGPDEANAAYWIKDNM----K 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGITVTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|209518326|ref|ZP_03267151.1| succinyl-CoA synthetase, alpha subunit [Burkholderia sp. H160] gi|209501245|gb|EEA01276.1| succinyl-CoA synthetase, alpha subunit [Burkholderia sp. H160] Length = 293 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 155/301 (51%), Positives = 210/301 (69%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHT Y + V G++PK+ + G +P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTRACREYANGREAYVAGVNPKRAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +VAEAK T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ +K R+ Sbjct: 57 YASVAEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEIKDRMR 116 Query: 119 KS--SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + L+GPNCPG +TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q + GLG Sbjct: 117 RENRKTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTAIGLG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QS+AVGIGGDP+ G + IDV+++F D T++++M+GEIGG E AA+++K K Sbjct: 177 QSSAVGIGGDPINGLKHIDVMKMFNDDPDTDAVIMIGEIGGPDEANAAEWIK----GNMK 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGF+AG TAPPG+ MGHAGA+ISGG AE K+ M GI + +P+ + R L + Sbjct: 233 KPVVGFIAGVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGIKVTKNPSEMARLLKAM 292 Query: 297 L 297 L Sbjct: 293 L 293 >gi|88803193|ref|ZP_01118719.1| succinyl-CoA synthase, alpha subunit [Polaribacter irgensii 23-P] gi|88780759|gb|EAR11938.1| succinyl-CoA synthase, alpha subunit [Polaribacter irgensii 23-P] Length = 292 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 160/299 (53%), Positives = 216/299 (72%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K++VQG TG GTFH Q I Y T VVGG+ P KG G PVF Sbjct: 1 MSVLVNKNSKIIVQGFTGSEGTFHAGQMIDY-GTNVVGGVTPGKGGQEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV E+ E A+ S+I+VPP+ A DAI+E+ +A I +I+CITEGIP DMV+VKA ++ Sbjct: 56 TVLESVEEVGADTSIIFVPPAFAADAIMEAADAGIKVIICITEGIPTADMVKVKAYIDTR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TPD K+GIMPG IF+KG+VGI+S+SGTLTYEA Q ++G G +TA Sbjct: 116 DCRLIGPNCPGVITPDEAKVGIMPGFIFKKGNVGIVSKSGTLTYEAADQVVKQGYGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D+ TE+IVM+GEIGG+ E EAAQ++K + G +KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDDETEAIVMIGEIGGNLEAEAAQWIKAD---GNRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAP GRTMGHAGA++ G A+ K+ + E G+ + SPA+IG + ++LG Sbjct: 233 GFIAGQTAPAGRTMGHAGAIVGGADDTAQAKMKILAECGVHVVSSPAKIGEMVAKVLGK 291 >gi|329938122|ref|ZP_08287573.1| succinyl-CoA synthetase subunit alpha [Streptomyces griseoaurantiacus M045] gi|329302611|gb|EGG46501.1| succinyl-CoA synthetase subunit alpha [Streptomyces griseoaurantiacus M045] Length = 294 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 146/300 (48%), Positives = 199/300 (66%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++K++KV+VQG+TG G HT+ +L T+VVGG++P+K VPVF Sbjct: 1 MAIWLNKDSKVIVQGMTGATGMKHTK-LMLGDGTEVVGGVNPRKAGQTVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TV EA E+T AN SVI+VP DA++E+I+AEIPL V ITEGI V D A + Sbjct: 60 TVKEAIEKTGANVSVIFVPEKFTKDAVVEAIDAEIPLAVVITEGIAVHDSASFWAYAGKK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI+TP +GI+PG I + G +G++S+SGTLTY+ +++ LG S Sbjct: 120 GNKTRIIGPNCPGIITPGQSNVGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--LGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA F+K+ KP Sbjct: 178 TAVGIGGDPIIGTTHIDALAAFEADPETDLIVMIGEIGGDAEERAADFIKENV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P + E+L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAKLAREILA 293 >gi|264680906|ref|YP_003280816.1| succinyl-CoA synthetase, subunit alpha [Comamonas testosteroni CNB-2] gi|299530897|ref|ZP_07044311.1| succinyl-CoA synthetase subunit alpha [Comamonas testosteroni S44] gi|262211422|gb|ACY35520.1| succinyl-CoA synthetase, alpha subunit [Comamonas testosteroni CNB-2] gi|298721118|gb|EFI62061.1| succinyl-CoA synthetase subunit alpha [Comamonas testosteroni S44] Length = 299 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 156/307 (50%), Positives = 207/307 (67%), Gaps = 16/307 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+TKV+ QG+TGK G FHTE+ Y V G++PKK ++P+ Sbjct: 1 MSIFINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGEKI----FDIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 F +V +A + T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM ++ Sbjct: 57 FGSVKDAAKETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMK 116 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K + L+GPNCPG++TPD KIGIMPG I +KG VG++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRVGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+GQS+AVGIGGDP+ G + IDV+ F D T++++M+GEIGG E EAAQ+ K Sbjct: 177 LGIGQSSAVGIGGDPINGLKHIDVMRAFNDDPDTDAVIMIGEIGGPDEAEAAQWCKANM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G I +P+ +GR Sbjct: 236 ---KKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFTITRNPSEMGRL 292 Query: 293 LVELLGS 299 L LL Sbjct: 293 LQGLLKK 299 >gi|310790373|gb|EFQ25906.1| succinate-CoA ligase [Glomerella graminicola M1.001] Length = 333 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 171/297 (57%), Positives = 217/297 (73%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ TKVL QG TGK GTFH +QAI Y T+VVGG +PKK G +PVF Sbjct: 36 NLRINSETKVLFQGFTGKQGTFHAQQAIDY-GTKVVGGTNPKKAGQEHLG----LPVFAN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + T A+A+ I+VPP A I E+I AE+PL+VCITEGIP DMVR+ L+ +S Sbjct: 91 VGEAVKETGADATAIFVPPPLAAAGIEEAIAAEVPLVVCITEGIPQHDMVRITNMLKTQS 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA FL+ KP+V Sbjct: 211 VGIGGDPFSGTNFIDCLNVFLKDEETDGIIMIGEIGGSAEEDAADFLRANNTVNGGKPVV 270 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APPGR MGHAGA++SGGKGGA+ KI+A+K AG+ + PSPA +G++L + Sbjct: 271 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALKSAGVIVEPSPAGLGKALYDEF 327 >gi|239929388|ref|ZP_04686341.1| succinyl-CoA synthetase subunit alpha [Streptomyces ghanaensis ATCC 14672] gi|291437714|ref|ZP_06577104.1| succinyl-CoA synthetase alpha chain [Streptomyces ghanaensis ATCC 14672] gi|291340609|gb|EFE67565.1| succinyl-CoA synthetase alpha chain [Streptomyces ghanaensis ATCC 14672] Length = 294 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 140/300 (46%), Positives = 194/300 (64%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KV+VQG+TG G HT + +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKESKVIVQGMTGSEGQKHTRR-MLASGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TV EA E+T A+ +VI+VP DA+IE+I+AEIPL V ITEGI V D A + Sbjct: 60 TVKEAIEKTGADVTVIFVPEKFTKDAVIEAIDAEIPLAVVITEGIAVHDTASFWAYAGKK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPADITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA F+K+ KP Sbjct: 178 TCVGIGGDPIIGTTHIDALKAFQDDPDTDLIVMIGEIGGDAEERAAAFIKENV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P + +LG Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAKLARAVLG 293 >gi|195438794|ref|XP_002067317.1| GK16245 [Drosophila willistoni] gi|194163402|gb|EDW78303.1| GK16245 [Drosophila willistoni] Length = 351 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 160/300 (53%), Positives = 214/300 (71%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + K TKV++QG TGK GTFH + A Y T +VGG+ P KG T PVF T Sbjct: 36 NLKIKKETKVMIQGFTGKQGTFHAKAAQEY-GTNIVGGVSPSKGGTTHLDK----PVFKT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + +A+ I++PP+ AG+ I +IE EI LIV ITEGIP +DMVR+ L + Sbjct: 91 VKEAVKELKPDATAIFIPPNNAGEGICAAIENEIGLIVAITEGIPQVDMVRIMQMLNCQE 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++P+ CKIGIMP I ++G+VGI+SRSGTLTYEAV QT+ GLGQS Sbjct: 151 KSRLLGPNCPGIISPEQCKIGIMPSHIHKRGTVGIVSRSGTLTYEAVLQTTSVGLGQSLC 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G GGDP GT FID L++FLAD T+ I+++GEIGGSAEE+AA +LK+ KP+V Sbjct: 211 IGCGGDPFNGTSFIDGLKIFLADPETKGIILIGEIGGSAEEDAADYLKEHNSGCNAKPVV 270 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG++APPGR MGHAGA+ISGGKG A+DK+ A+++AG+ +A +P +G+ L + L Sbjct: 271 SFIAGQSAPPGRRMGHAGAIISGGKGAAKDKVAALEKAGVIVAKNPCHMGQLLHNEMVRL 330 >gi|187736199|ref|YP_001878311.1| succinyl-CoA synthetase, alpha subunit [Akkermansia muciniphila ATCC BAA-835] gi|187426251|gb|ACD05530.1| succinyl-CoA synthetase, alpha subunit [Akkermansia muciniphila ATCC BAA-835] Length = 295 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 160/300 (53%), Positives = 211/300 (70%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ L+DKNT+++VQG+TG AG FH + + + T VV G+ P KG + G VPVF Sbjct: 1 MTSLIDKNTRLVVQGITGSAGAFHAKNCMDF-GTNVVAGVTPGKGGQLFEGK---VPVFD 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK+ T NAS+I+VPP A DAI+E+ +A + LIVCITEGIPV DM +VK L+ Sbjct: 57 TVAEAKKATDCNASMIFVPPPFAADAIMEAADAGVKLIVCITEGIPVQDMQKVKTFLKDK 116 Query: 121 SSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 LIGPNCPGI+ P + CKIGIMP IF+ G +GI+SRSGTLTYEAV+Q + GLGQS Sbjct: 117 DVTLIGPNCPGIVNPSANCKIGIMPAYIFKPGRIGIVSRSGTLTYEAVWQVTNMGLGQSM 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV G ++ F D T++ +M+GEIGGS EEEAA+++K+ KKP+ Sbjct: 177 CIGIGGDPVHGMTQQQAVQFFTEDPNTDAFIMIGEIGGSEEEEAAEWIKNNC----KKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAP GR MGHAGA+++GGKG A K A+K AGI +A +PA++G +L E + + Sbjct: 233 AAFIAGATAPKGRRMGHAGAIVAGGKGTAAAKQEALKNAGIVVAKTPAQMGAALAEAMKN 292 >gi|194768527|ref|XP_001966363.1| GF22035 [Drosophila ananassae] gi|190617127|gb|EDV32651.1| GF22035 [Drosophila ananassae] Length = 356 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 159/300 (53%), Positives = 216/300 (72%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V+K+TKV+VQG TGK TFH++++I Y T++VGG+ P KG T +++ PVF Sbjct: 47 NLKVNKDTKVMVQGFTGKQATFHSKESIKY-GTKIVGGVSPNKGGT----QHLDKPVFKD 101 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + +A+VI++PP A + I +IE EI LIV ITEGIP +DMVR+ L + Sbjct: 102 VAEAVKELKPDATVIFIPPPSAAEGICAAIENEIGLIVAITEGIPQVDMVRIMQMLRCQE 161 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPG+++PD CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 162 KSRLLGPNCPGLISPDQCKIGIMPGHIHKRGCVGIVSRSGTLTYEAVHQTTGVGLGQALC 221 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G GGDP GT FID L +FL D+ + I+++GEIGG+AEEEAA +L KP+V Sbjct: 222 IGCGGDPFNGTSFIDALRIFLPDKEVKGIILIGEIGGTAEEEAADYLMANNTGCEAKPVV 281 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG+TAPPGR MGHAGA+ISGGKG A DK+ A+++AG+ +A +P +G +L + L Sbjct: 282 AFIAGQTAPPGRRMGHAGAIISGGKGAASDKVKALEKAGVKVATNPCHMGITLYNEMVRL 341 >gi|302404970|ref|XP_003000322.1| succinyl-CoA ligase subunit alpha [Verticillium albo-atrum VaMs.102] gi|261360979|gb|EEY23407.1| succinyl-CoA ligase subunit alpha [Verticillium albo-atrum VaMs.102] Length = 329 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 163/296 (55%), Positives = 205/296 (69%), Gaps = 9/296 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ TKVL QG TGK GTFH +QAI Y T+VVGG +PKK + G +PVF Sbjct: 37 NLRINGETKVLFQGFTGKQGTFHAQQAIDY-GTKVVGGTNPKKAGSEHLG----LPVFGN 91 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V+EA + T A A+ I+VPP A I E+IEAEIPL+VCITEGIP M Sbjct: 92 VSEAVKATGATATAIFVPPPVAAAGIEEAIEAEIPLVVCITEGIPQHGMFC----APSPR 147 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 PNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 148 PVSSAPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLVV 207 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID L+ FL DE T+ I+M+GEIGGSAEE+AA+FL+ KP+V Sbjct: 208 GIGGDPFSGTNFIDCLQTFLKDEETDGIIMIGEIGGSAEEDAAEFLRANNTVNGGKPVVS 267 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L + Sbjct: 268 FIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALEAAGVIVERSPAGLGKALYDEF 323 >gi|217977879|ref|YP_002362026.1| succinyl-CoA synthetase subunit alpha [Methylocella silvestris BL2] gi|217503255|gb|ACK50664.1| succinyl-CoA synthetase, alpha subunit [Methylocella silvestris BL2] Length = 308 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 148/303 (48%), Positives = 200/303 (66%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+N++VLVQG TG GTFH ++ ++ C T VVGG+ P KG G PVF Sbjct: 1 MSILIDENSRVLVQGFTGDKGTFHAKE-MIECGTNVVGGVTPGKGGATHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 TV +A T AN S+ +V P+ DAI+E+ +A I L+ IT+GIP DM+RVK L Sbjct: 56 TVKDAVRATGANCSITFVAPAFCADAIMEAADAGIGLVCSITDGIPAQDMMRVKRYLLRY 115 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + ++GPNC GI++P +GIMP +I+ +GSVGI+SRSGTL YEA Q + G+G Sbjct: 116 QRGRRTLMVGPNCAGIISPGKAMLGIMPSNIYMRGSVGIVSRSGTLGYEAAAQMKELGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L LF D TE+++M+GEIGG E EAA ++KD Sbjct: 176 VSTSVGIGGDPINGSSFLDHLILFEQDPETEAVMMIGEIGGPQEAEAAAWIKDNM----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VG+VAG TAP GR MGHAGA+IS A +K MK G+ +APSP+ +G ++ + Sbjct: 232 KPVVGYVAGLTAPKGRRMGHAGAIISASGDSAAEKSEIMKSYGLTVAPSPSELGATMARV 291 Query: 297 LGS 299 LG Sbjct: 292 LGR 294 >gi|323701753|ref|ZP_08113424.1| succinyl-CoA synthetase, alpha subunit [Desulfotomaculum nigrificans DSM 574] gi|323533289|gb|EGB23157.1| succinyl-CoA synthetase, alpha subunit [Desulfotomaculum nigrificans DSM 574] Length = 290 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 141/299 (47%), Positives = 195/299 (65%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I++D +T +LVQG+TGK G+FHT Q + Y ++V G+ P KG G VPVF Sbjct: 1 MAIIIDHDTVILVQGITGKQGSFHTAQMLAY-GSRVAAGVSPGKGGQSVHG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E AS+I++P G DA E+I A I +V ITE +P+ D + + A EK Sbjct: 56 TVAEAVEHYPITASIIFIPAPGVKDAAFEAISAGIKTLVIITEHVPLHDELDIMAYAEKW 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPN GI++P K+GIMP SI++ GSVG+++RSGTL+YE V+ + GLGQST Sbjct: 116 GVTVIGPNTFGIISPGQSKMGIMPNSIYQPGSVGVVARSGTLSYEIVYNLTAAGLGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGD V G F+DVL F D TE+IV+VGEIGG+AEEEA+ ++K+ KP++ Sbjct: 176 VGLGGDRVVGLSFVDVLRQFETDPNTEAIVLVGEIGGNAEEEASLYIKE-----MTKPVM 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG +APPG+ MGHAGA+I GKG + K+ A+ AG +A P + + + E L Sbjct: 231 AFLAGSSAPPGKRMGHAGAIIERGKGTFQSKVAALTAAGAKVANLPWEVPQLVKESLQK 289 >gi|124265264|ref|YP_001019268.1| succinyl-CoA synthetase subunit alpha [Methylibium petroleiphilum PM1] gi|124258039|gb|ABM93033.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methylibium petroleiphilum PM1] Length = 297 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 156/305 (51%), Positives = 207/305 (67%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++KNTKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MSILINKNTKVITQGITGKTGQFHTRGCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 + +V EA +T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM ++ Sbjct: 57 YASVKEAAGQTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVKDMLLVRNKMK 116 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K + L+GPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q S+ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVAQLSE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV+ F D T++++M+GEIGG E EAA++ K Sbjct: 177 LGLGQSSAVGIGGDPINGLKHIDVMRAFNDDPDTDAVIMIGEIGGPDEAEAARWCKANM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + +P+ +G+ Sbjct: 236 ---KKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFTVTRNPSEMGKL 292 Query: 293 LVELL 297 L LL Sbjct: 293 LKGLL 297 >gi|150401203|ref|YP_001324969.1| succinyl-CoA synthetase subunit alpha [Methanococcus aeolicus Nankai-3] gi|150013906|gb|ABR56357.1| succinyl-CoA synthetase, alpha subunit [Methanococcus aeolicus Nankai-3] Length = 286 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 130/295 (44%), Positives = 200/295 (67%), Gaps = 10/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NTK +VQG+TGK G+FHT+ ++ C T +V G+ P KG +P++ TV Sbjct: 2 ILLDENTKAVVQGITGKQGSFHTK-NMVECGTNIVAGVTPGKGGM----ELYEIPIYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA ++ ANAS+I+VP DA E+I+A I L++ ITE +PV D + + + + ++ Sbjct: 57 LEAVKKHDANASIIFVPAPFVKDAAYEAIDAGIKLVIIITEHVPVNDAIDIISYAKSNNV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PG+ +P K+GI+P ++ ++G +G++SRSGTLTYE + S G GQS+ +G Sbjct: 117 HVIGPNTPGMASPKVGKLGIIPMNVIKEGKIGMVSRSGTLTYEIANELSNNGFGQSSCIG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV G +I++LE+F D T+++VM+GEIGGS EE AA+++K KKP++ + Sbjct: 177 IGGDPVIGLSYIEILEMFENDPDTDAVVMIGEIGGSNEEIAAEYVK-----TMKKPVIAY 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG+TAP G+TMGHAGA+I G G AE K+ +++AG + + + I + L E+L Sbjct: 232 IAGQTAPEGKTMGHAGAIIEKGVGTAESKMKTLEQAGAFVVRTISEIPKVLKEVL 286 >gi|327274280|ref|XP_003221906.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial-like [Anolis carolinensis] Length = 328 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 173/299 (57%), Positives = 226/299 (75%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + K+TKV+ QG TGK GTFH++QA+ Y T +VGGI P KG G +PVF + Sbjct: 31 NLYITKDTKVICQGFTGKQGTFHSQQALEY-GTNLVGGISPGKGGKTHLG----LPVFNS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V+EA +T A+ASVIYVPP+ A AI E+I+AEI L+VCITEGIP DMVRVK RL ++ Sbjct: 86 VSEAIAKTGASASVIYVPPAFAAAAINEAIDAEISLVVCITEGIPQQDMVRVKHRLLRQN 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++RL+GPNCPG++ P CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 146 NTRLVGPNCPGVINPGECKIGIMPGHIHKKGRVGIVSRSGTLTYEAVHQTTQVGLGQSFC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID LE+FL D TE I+++GEIGG+AEE+AA++L+ KP+V Sbjct: 206 VGIGGDPFNGTNFIDCLEVFLKDPHTEGIILIGEIGGNAEEDAAEYLRKNNSGQDSKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 266 SFIAGVTAPPGRRMGHAGAIIAGGKGGAKEKIMALQNAGVIVSMSPAQLGSTIYKEFEK 324 >gi|225175981|ref|ZP_03729973.1| succinyl-CoA synthetase, alpha subunit [Dethiobacter alkaliphilus AHT 1] gi|225168569|gb|EEG77371.1| succinyl-CoA synthetase, alpha subunit [Dethiobacter alkaliphilus AHT 1] Length = 290 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 135/299 (45%), Positives = 189/299 (63%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + +T+VLVQG+TG G+FHT Q + Y T+VV G+ P KG G +PV+ Sbjct: 1 MAIYLYDDTQVLVQGMTGNQGSFHTRQMVKY-GTKVVAGVSPGKGGQELDG----IPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA A E+ +AS++++P A DA E+I+A + ++V + E IPV D + + A + Sbjct: 56 TVAAAVEKHRIDASILFIPAPFAKDAAFEAIDAGVKVLVMLPEHIPVQDAMEIMAFAKSR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + + GPN G+++ CKIGIMP F G +G++SRSGTL YE V + G G ST Sbjct: 116 GTVVAGPNTFGVVSSGKCKIGIMPNQFFVPGDIGVVSRSGTLCYEIVGNLTAAGYGTSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGD V G FIDVL+ D T++I+MVGEIGGSAEEEAA+F+K KP+V Sbjct: 176 VGLGGDRVVGLNFIDVLQEMEKDPETKAIIMVGEIGGSAEEEAAEFIKANI----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AGK+APPG+ MGHAGA+I GKG E K+ A+ AG+ +A P ++ L E L Sbjct: 232 AYLAGKSAPPGKRMGHAGAIIERGKGTFEGKVKALNAAGVPVAELPFQVPDLLAEALKR 290 >gi|221069775|ref|ZP_03545880.1| succinyl-CoA synthetase, alpha subunit [Comamonas testosteroni KF-1] gi|220714798|gb|EED70166.1| succinyl-CoA synthetase, alpha subunit [Comamonas testosteroni KF-1] Length = 299 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 157/307 (51%), Positives = 207/307 (67%), Gaps = 16/307 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+TKV+ QG+TGK G FHTE+ Y V G++PKK ++P+ Sbjct: 1 MSIFINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGEKI----FDIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 F +V +A + T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM ++ Sbjct: 57 FGSVKDAAKETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMK 116 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K + L+GPNCPG++TPD KIGIMPG I +KG VG++SRSGTLTYEAV Q S+ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRVGVVSRSGTLTYEAVAQLSE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+GQS+AVGIGGDP+ G + IDV+ F D T++++M+GEIGG E EAAQ+ K Sbjct: 177 LGIGQSSAVGIGGDPINGLKHIDVMRAFNDDPDTDAVIMIGEIGGPDEAEAAQWCKANM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G I +P+ +GR Sbjct: 236 ---KKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFTITRNPSEMGRL 292 Query: 293 LVELLGS 299 L LL Sbjct: 293 LQGLLKK 299 >gi|302695055|ref|XP_003037206.1| hypothetical protein SCHCODRAFT_13366 [Schizophyllum commune H4-8] gi|300110903|gb|EFJ02304.1| hypothetical protein SCHCODRAFT_13366 [Schizophyllum commune H4-8] Length = 324 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 165/300 (55%), Positives = 216/300 (72%), Gaps = 7/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + K+TKVLVQG+TGK TFH +A+ Y T +VGG+ PKK G +PVF + Sbjct: 26 NLRIHKDTKVLVQGVTGKTATFHAAEALKY-GTNMVGGVSPKKAGQTHLG----LPVFGS 80 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA T +A+V+YVPP A DAII++IE EI LIVCITEGIP D +RV L+ +S Sbjct: 81 VKEAVRETHPDATVLYVPPPSAADAIIDAIENEIGLIVCITEGIPQQDEIRVANALKNQS 140 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P CK+GI PG I G +GI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 141 KSRLVGPNCPGIINPLGCKMGIQPGHIHTPGKIGIVSRSGTLTYEAVAQTTDVGLGQTLC 200 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK-RGRKKPI 239 VGIGGDP GT +DV+++FL D TE IV++GEIGGS EE+AA++L+ K R KP+ Sbjct: 201 VGIGGDPFPGTTHLDVVKVFLEDPNTEGIVIIGEIGGSMEEDAAEYLEKYNKTRAVPKPV 260 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VGF+AG+TAPPGR MGHAGA+I+GGKG A DK+ A++ AG + SPA+IG +++ + + Sbjct: 261 VGFIAGRTAPPGRRMGHAGAIIAGGKGAASDKVKALEAAGAIVTDSPAKIGSEMLKAMKA 320 >gi|256371137|ref|YP_003108961.1| succinyl-CoA synthetase, alpha subunit [Acidimicrobium ferrooxidans DSM 10331] gi|256007721|gb|ACU53288.1| succinyl-CoA synthetase, alpha subunit [Acidimicrobium ferrooxidans DSM 10331] Length = 295 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 161/303 (53%), Positives = 203/303 (66%), Gaps = 12/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI VD++T+V+VQGLTG+ G FH + Y TQVV G+ P KG T G +PVF Sbjct: 1 MSIFVDEHTRVIVQGLTGRQGMFHGLRNRAY-GTQVVAGVTPGKGGTDVEG----IPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA T ANAS I VPP A +AI+E+ A IPLIVCITE IP D V A L + Sbjct: 56 TVKEAAAATNANASFIVVPPRFAPEAILEAAAAGIPLIVCITEFIPAKDEAMVAAVLRRD 115 Query: 120 -SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS-VGILSRSGTLTYEAVFQTSQEGLGQ 177 +RLIGPNCPGI++P C IGI G I R G VGI+SRSGTLTY+A+++ SQ+G+GQ Sbjct: 116 YPGTRLIGPNCPGIISPGRCNIGITAGEIARPGGPVGIVSRSGTLTYQALYELSQQGVGQ 175 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 +T VGIGGDPV GT FID L F AD T +++M+GEIGG EE AA F+ + K Sbjct: 176 TTCVGIGGDPVPGTTFIDCLAAFEADPETRAVLMIGEIGGQDEELAAAFIAEHM----TK 231 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+V ++AG TAPPGR MGHAGA++SG G A+ KI A++ AG +A +P G +VE++ Sbjct: 232 PVVAYIAGVTAPPGRRMGHAGAIVSGSSGTAQAKIEALRAAGAIVAQNPTEAGERMVEVV 291 Query: 298 GSL 300 L Sbjct: 292 SRL 294 >gi|297203636|ref|ZP_06921033.1| succinyl-CoA synthetase subunit alpha [Streptomyces sviceus ATCC 29083] gi|197717230|gb|EDY61264.1| succinyl-CoA synthetase subunit alpha [Streptomyces sviceus ATCC 29083] Length = 309 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 135/300 (45%), Positives = 195/300 (65%), Gaps = 7/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K ++VLVQG+TG G HT + +L T VVGG++P+K + VPVF Sbjct: 1 MAIFLTKESRVLVQGMTGGEGMKHTRR-MLAAGTNVVGGVNPRKAGQRVDFDDRAVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VA+ T A+ +V++VPP AG A++E+++A I L V ITEGIPV D V + +K Sbjct: 60 SVADGIGATGADVTVVFVPPPFAGAAVVEAVDAGIALAVVITEGIPVHDSVAFTSYAKKK 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R++GPNCPG++TP GI+P I R G +G++S+SGTLTY+ +++ +G ST Sbjct: 120 GTRIVGPNCPGLITPGQSNAGIIPADITRSGRIGLVSKSGTLTYQLMYELRD--IGFSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L F D TE IV++GEIGG AEE AA ++++ KP+V Sbjct: 178 VGIGGDPVVGTTHIDCLAAFQDDPDTELIVLIGEIGGDAEERAAAYIREHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 G++AG TAP GRTMGHAGA++SG G A K A++ G+ + +P R +++LL ++ Sbjct: 234 GYIAGFTAPEGRTMGHAGAIVSGSAGTARAKKAALEAVGVKVGNTPTETARLVLDLLDTV 293 >gi|119899621|ref|YP_934834.1| succinyl-CoA synthetase subunit alpha [Azoarcus sp. BH72] gi|119672034|emb|CAL95948.1| probable succinyl-CoA synthetase, alpha chain [Azoarcus sp. BH72] Length = 297 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 152/305 (49%), Positives = 205/305 (67%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+TKV+ QG+TGK G FHTE+ Y V G++PKK ++P+ Sbjct: 1 MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGERI----FDIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 + +V EA T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM ++ Sbjct: 57 YASVKEAASETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMK 116 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAA + K Sbjct: 177 LGLGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAALWCKANM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKP+VGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G + +P+ +G+ Sbjct: 236 ---KKPVVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFKVTRNPSEMGKL 292 Query: 293 LVELL 297 L LL Sbjct: 293 LKSLL 297 >gi|319764916|ref|YP_004128853.1| succinyl-CoA synthetase, alpha subunit [Alicycliphilus denitrificans BC] gi|330827120|ref|YP_004390423.1| succinyl-CoA synthetase subunit alpha [Alicycliphilus denitrificans K601] gi|317119477|gb|ADV01966.1| succinyl-CoA synthetase, alpha subunit [Alicycliphilus denitrificans BC] gi|329312492|gb|AEB86907.1| succinyl-CoA synthetase, alpha subunit [Alicycliphilus denitrificans K601] Length = 297 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 154/305 (50%), Positives = 210/305 (68%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+T+V+ QG+TGK G FHTE+ Y V G++PKK ++P+ Sbjct: 1 MSIYINKDTRVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGEKI----FDIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 + +V +A ++T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM ++ Sbjct: 57 YGSVKDAAQQTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMK 116 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K + L+GPNCPG++TPD KIGIMPG I +KG VG++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKRTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRVGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+GQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAA++ KD Sbjct: 177 LGIGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAARWCKDNM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G I +P+ +GR Sbjct: 236 ---KKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFRITRNPSEMGRI 292 Query: 293 LVELL 297 L LL Sbjct: 293 LKGLL 297 >gi|319955636|ref|YP_004166903.1| succinyl-CoA synthetase, alpha subunit [Cellulophaga algicola DSM 14237] gi|319424296|gb|ADV51405.1| succinyl-CoA synthetase, alpha subunit [Cellulophaga algicola DSM 14237] Length = 290 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 154/298 (51%), Positives = 207/298 (69%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T +VGG+ P KG G PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIDY-GTNIVGGVTPGKGGQEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+ A+ ++I+VPP+ A DAI+E+ A I +I+ ITEGIPV DMV+ ++ Sbjct: 56 TVHEAVEKVGADTTIIFVPPAFAADAIMEAANAGIKVIITITEGIPVADMVKASNYIKDM 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG +F+KG+VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLIGPNCPGVITPGEAKVGIMPGFVFKKGNVGIVSKSGTLTYEAADQVVRQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +E+ + D TE +VM+GEIGG E +AA++ K G KKPIV Sbjct: 176 IGIGGDPIIGTTTKEAVEMLINDPETECVVMIGEIGGQLEPDAARWYKA---SGSKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G A+ K M+E GI + SPA IG + E++G Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSDDTAQAKKRIMRECGIHVVESPAEIGLKVKEVMG 290 >gi|325981127|ref|YP_004293529.1| succinyl-CoA synthetase, alpha subunit [Nitrosomonas sp. AL212] gi|325530646|gb|ADZ25367.1| succinyl-CoA synthetase, alpha subunit [Nitrosomonas sp. AL212] Length = 295 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 136/304 (44%), Positives = 195/304 (64%), Gaps = 13/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+++ TK++VQG TG+ GTFH ++ I Y + VVGG+ P KG G +PVF Sbjct: 1 MAILINEKTKIIVQGFTGRIGTFHAQEMIDY-GSNVVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E+ A AS+++VPP+ A D+I+E+ +A I V IT+GIP DM+ VK L + Sbjct: 56 TVKEAVEQVGAEASIVFVPPAFAADSIMEAADAGIKYCVSITDGIPTQDMMTVKNFLRRF 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L GPNC G ++P +GIMPG I+ +G+VG++ RSGTL YEA Q G+G Sbjct: 116 PKTERMLLTGPNCAGTISPGRAMLGIMPGHIYIRGNVGVVGRSGTLGYEAADQMRLLGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ D+LE D T+ +M+GEIGG E +A +F K+ Sbjct: 176 ISTSVGIGGDPIPGSSHRDILERLEQDPETKVALMIGEIGGPQEVDAGKFAKENMS---- 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ ++AG TAP GR MGHAGA+IS A +K+ +KE G+ I P+P+ +G+++ E+ Sbjct: 232 KPLIAYIAGLTAPEGRRMGHAGAIISSAGESAAEKVAMLKELGVTICPTPSLMGQTVAEV 291 Query: 297 LGSL 300 L L Sbjct: 292 LAKL 295 >gi|242793763|ref|XP_002482233.1| succinyl-CoA synthetase alpha subunit, putative [Talaromyces stipitatus ATCC 10500] gi|218718821|gb|EED18241.1| succinyl-CoA synthetase alpha subunit, putative [Talaromyces stipitatus ATCC 10500] Length = 330 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 171/297 (57%), Positives = 220/297 (74%), Gaps = 8/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ T+V+ QG TGK GTFH EQAI Y T+VVGG +PKK T ++ PVF T Sbjct: 35 NLRINSETRVIFQGFTGKQGTFHAEQAIAY-GTKVVGGTNPKKAGTTH----LDRPVFAT 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V++A + T A AS I+VPP A I E+I AEIPL+VCITEGIP DMVR+ L+ ++ Sbjct: 90 VSDAVKETGATASAIFVPPPLAAAGIEEAIAAEIPLVVCITEGIPQHDMVRITDILKTQN 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 150 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTHAGLGQSLV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA+FLK E K+ KP V Sbjct: 210 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAEFLKSENKQ--NKPTV 267 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L + Sbjct: 268 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALEAAGVIVERSPAHLGKALRDEF 324 >gi|227506175|ref|ZP_03936224.1| succinyl-CoA synthetase subunit alpha [Corynebacterium striatum ATCC 6940] gi|227197199|gb|EEI77247.1| succinyl-CoA synthetase subunit alpha [Corynebacterium striatum ATCC 6940] Length = 294 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 134/300 (44%), Positives = 195/300 (65%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K+++++VQG+TG G HT + +L + +VGG++PKK +PVF Sbjct: 1 MSIFLNKDSRIIVQGMTGAEGMKHTRR-MLASGSNIVGGVNPKKAGERVDIEGQQIPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA + T AN +VI+VP DA E+I A I L+V ITEG+PV D + A +S Sbjct: 60 SVREAMQATDANVTVIFVPAKFTKDAAEEAIRAGIELVVIITEGVPVKDTAELFALARES 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +R+IGPNCPG+ +P GI+P G +G++S+SGTLTY+ +++ S +G ST Sbjct: 120 KTRIIGPNCPGLYSPGQSNAGIIPAETAPNPGKIGLVSKSGTLTYQMMYELSD--IGFST 177 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT I +E F D TE+I+M+GEIGG AEE AA+++K+ KP+ Sbjct: 178 CVGIGGDPIIGTTHITAIEAFEKDPETEAIIMIGEIGGDAEEYAARYIKEHV----TKPV 233 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V ++AG TAP G+TMGHAGA++SGG G AE K A++EAG+ + +P++ + L E L S Sbjct: 234 VAYIAGFTAPEGKTMGHAGAIVSGGSGTAEGKKAALEEAGVKVGKTPSQAAQLLREALKS 293 >gi|171464129|ref|YP_001798242.1| succinyl-CoA synthetase, alpha subunit [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193667|gb|ACB44628.1| succinyl-CoA synthetase, alpha subunit [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 297 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 153/305 (50%), Positives = 206/305 (67%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++KNTKV+ QG+TGK G FHTE+ Y V G++PKK + N+P+ Sbjct: 1 MSILINKNTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGEFI----FNIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 + TV EA ++T A SVIYVPP GA AI E++EA++ ++CITEGI V DM + Sbjct: 57 YGTVKEAAQQTGATTSVIYVPPPGAAAAIWEAVEADLDFVICITEGISVRDMLEVRNKMH 116 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K + L+GPNCPGI+TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q + Sbjct: 117 AKEAAGGKKTLLLGPNCPGIITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLTA 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 LGQSTAVGIGGDP+ G + ID++++F D T++++M+GEIGG E EAA++ KD Sbjct: 177 IDLGQSTAVGIGGDPINGLKHIDIMKMFNEDPETDAVIMIGEIGGPDEAEAARWCKDNM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + +P+ + Sbjct: 236 ---KKPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAVMEECGFKVTRNPSEMAAL 292 Query: 293 LVELL 297 L +L Sbjct: 293 LKAML 297 >gi|300024656|ref|YP_003757267.1| succinyl-CoA synthetase, subunit alpha [Hyphomicrobium denitrificans ATCC 51888] gi|299526477|gb|ADJ24946.1| succinyl-CoA synthetase, alpha subunit [Hyphomicrobium denitrificans ATCC 51888] Length = 299 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 139/303 (45%), Positives = 193/303 (63%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +++ T +L+QG TG+ GTFH ++ I Y + VVGG+ P KG T G PVF Sbjct: 1 MAIFINEKTPILIQGFTGRIGTFHAQEMIDY-GSNVVGGVTPGKGGTSHLGR----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A + T A AS+++VPP A DAI+E+ +A I VCIT+GIP DM+RVK + + Sbjct: 56 TVKGAVDETGAEASIVFVPPPFAADAIMEAADAGIKYCVCITDGIPAQDMIRVKRYMRRY 115 Query: 121 S----SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L GPNC G ++P +GIMPG I+ G VGI+ RSGTL YEA Q G+G Sbjct: 116 KKEARMILTGPNCAGTISPGKAMLGIMPGHIYLPGRVGIVGRSGTLGYEAAAQLKALGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ DVLE F D T++I+M+GEIGG E EA F K+ K Sbjct: 176 VSTSVGIGGDPINGSSHRDVLEHFENDPETDAILMIGEIGGPQEAEAGLFAKEHM----K 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ ++AG +AP GR MGHAGA++S A +K+ +K G+ IAP+P+ +G ++ ++ Sbjct: 232 KPVIAYIAGLSAPKGRRMGHAGAIVSAFGESAAEKVEILKGCGVAIAPTPSEMGSTVAQV 291 Query: 297 LGS 299 LG Sbjct: 292 LGK 294 >gi|221126323|ref|XP_002165744.1| PREDICTED: similar to mitochondrial putative GDP-forming succinate-CoA ligase alpha subunit [Hydra magnipapillata] gi|260221893|emb|CBA30912.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Curvibacter putative symbiont of Hydra magnipapillata] Length = 297 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 153/305 (50%), Positives = 209/305 (68%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+TKV+ QG+TGK G FHTE+ Y V G++PKK N+P+ Sbjct: 1 MSIFINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGESI----FNIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +A T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ R++ Sbjct: 57 YASVKDAAAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVKDMLEVRNRMK 116 Query: 119 ------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAA++ K Sbjct: 177 IGLGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAARWCKLNM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + +P+ + + Sbjct: 236 ---KKPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAVMEECGFKVTRNPSEMAKL 292 Query: 293 LVELL 297 L LL Sbjct: 293 LKALL 297 >gi|222112554|ref|YP_002554818.1| succinyl-CoA synthetase subunit alpha [Acidovorax ebreus TPSY] gi|221731998|gb|ACM34818.1| succinyl-CoA synthetase, alpha subunit [Acidovorax ebreus TPSY] Length = 297 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 155/305 (50%), Positives = 208/305 (68%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+TKV+ QG+TGK G FHTE+ Y V G++PKK ++P+ Sbjct: 1 MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGEKI----FDIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 F +V +A + T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM ++ Sbjct: 57 FGSVKDAAKETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMK 116 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K + L+GPNCPG++TPD KIGIMPG I +KG VG++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKRTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRVGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+GQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAA++ K Sbjct: 177 LGIGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAARWCKANM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G I +P+ +GR Sbjct: 236 ---KKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFTITRNPSEMGRL 292 Query: 293 LVELL 297 L LL Sbjct: 293 LKGLL 297 >gi|269986366|gb|EEZ92663.1| succinyl-CoA synthetase, alpha subunit [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 288 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 146/295 (49%), Positives = 199/295 (67%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNT+VLVQG+TG G FH++ A+L T+VV G+ P KG G V VF Sbjct: 1 MAILMDKNTRVLVQGITGHQGRFHSK-AMLELGTKVVAGVTPGKGGQRVNG----VRVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V+EA E+T AN+SVI+VP S D++IE+I++ I LI ITE +P DM+R++ Sbjct: 56 SVSEAVEKTGANSSVIFVPASLTEDSVIEAIDSGIKLITIITEHVPFQDMLRIRDYANMH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPGI P K+GI+P S +KGSVG++SRSGTLTYE V ++ G+G+ST Sbjct: 116 GVTIIGPNCPGIAVPGVGKLGIIPNSTLKKGSVGVISRSGTLTYEIVNVLTENGMGESTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGD V G FID L LF D T+++V+VGEIGG EE+AA+F+++ G KP+V Sbjct: 176 LGIGGDKVPGISFIDALRLFKQDGQTKAVVIVGEIGGDEEEKAAEFIRN----GFDKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+ G APPG+ MGHAGA+ISG G AE K+ A ++A + +A + I LV Sbjct: 232 AFIDGIYAPPGKRMGHAGAIISGKTGTAESKLKAFEKANVPVAKNFKEIATYLVN 286 >gi|159041786|ref|YP_001541038.1| succinyl-CoA synthetase, alpha subunit [Caldivirga maquilingensis IC-167] gi|157920621|gb|ABW02048.1| succinyl-CoA synthetase, alpha subunit [Caldivirga maquilingensis IC-167] Length = 292 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 131/298 (43%), Positives = 196/298 (65%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVD+NT+VLVQG+TG G+ HT + Y T+VV G+ P +G G VPV+ Sbjct: 1 MTILVDQNTRVLVQGITGSEGSRHTLYMLQY-GTKVVAGVTPGRGGQQVHG----VPVYD 55 Query: 61 TVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA ++ N S+I+VP A DA+ E+++ I L+V ITE IP+ D +R + Sbjct: 56 SVEEALRKHPEINTSIIFVPARFASDAVYEAVDNGIRLVVIITEHIPIHDAIRFVNYAKY 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +IGPNCPG+++P K+GI+P +++ +KG VGI+SRSGTLTYE + +Q G GQS Sbjct: 116 KGTVIIGPNCPGVVSPTISKVGILPNNVYVKKGPVGIISRSGTLTYEISYHLTQAGFGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT+ ++ ++ D T+ +V++GEIGG EE A +++ KP Sbjct: 176 TVVGIGGDPIIGTDMVEAALMYENDPETKYLVVIGEIGGDQEERLASLVRE---GKVTKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 IV F+AG+TAPPG+ +GHAGA+IS G G E K+ A++ AGI +A +P + + + ++ Sbjct: 233 IVAFIAGRTAPPGKRLGHAGAIISMGVGTYEGKVKALESAGIKVAKTPLEVVKLIRDI 290 >gi|332293185|ref|YP_004431794.1| succinyl-CoA synthetase, alpha subunit [Krokinobacter diaphorus 4H-3-7-5] gi|332171271|gb|AEE20526.1| succinyl-CoA synthetase, alpha subunit [Krokinobacter diaphorus 4H-3-7-5] Length = 291 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 153/299 (51%), Positives = 209/299 (69%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIDY-GTNVVGGVTPGKGGQTHLDK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+ A+ ++I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DM++ + Sbjct: 56 TVQEAVEKVGADTTIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMIKASDYISTK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG +F+KG+VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 ECRLIGPNCPGVITPGEAKVGIMPGFVFKKGTVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE++VM+GEIGG E +AA++ K+ G KKP++ Sbjct: 176 IGIGGDPIIGTTTKEAVELLINDPETEAVVMIGEIGGQLEGDAAKWYKE---SGSKKPVI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAP GRTMGHAGA++ G A+ K M+E GI + SPA IG+ + E+LG Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSDDTAQAKKAIMRECGIHVVDSPAEIGKKVAEVLGK 291 >gi|325287862|ref|YP_004263652.1| succinyl-CoA synthetase subunit alpha [Cellulophaga lytica DSM 7489] gi|324323316|gb|ADY30781.1| succinyl-CoA synthetase, alpha subunit [Cellulophaga lytica DSM 7489] Length = 290 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 158/298 (53%), Positives = 210/298 (70%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH EQ I Y T VVGG+ P KG G PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAEQMIEY-GTNVVGGVTPGKGGQEHLGR----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+ A+ ++I+VPP+ A DAI+E+ A I +I+ ITEGIPV DMV+ ++ Sbjct: 56 TVLEAVEKVGADTTIIFVPPAFAADAIMEAANAGIKVIITITEGIPVADMVKASDYIKDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG +F+ G+VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLIGPNCPGVITPGEAKVGIMPGFVFKSGTVGIVSKSGTLTYEAADQVVRQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D ATE +VM+GEIGG E +AA++ K+ G KKPIV Sbjct: 176 IGIGGDPIIGTTTKEAVELLINDPATECVVMIGEIGGQLEADAAKWYKE---SGSKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G A+ K MKE GI + SPA IG+ + E++G Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSDDTAQAKKAIMKECGIHVVDSPAEIGKKVKEVMG 290 >gi|332526157|ref|ZP_08402292.1| succinyl-CoA synthetase subunit alpha [Rubrivivax benzoatilyticus JA2] gi|332109997|gb|EGJ10625.1| succinyl-CoA synthetase subunit alpha [Rubrivivax benzoatilyticus JA2] Length = 297 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 152/305 (49%), Positives = 212/305 (69%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+T+V+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSILINKDTRVITQGITGKTGQFHTHMCRDYANGRNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EA +T A SVIYVPP+GA AI E++EAE+ L +CITEGIP+ DM+ V+ R++ Sbjct: 57 YASVKEAAAQTGATVSVIYVPPAGAAAAIWEAVEAELDLAICITEGIPIKDMLEVRNRMK 116 Query: 119 ------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG +TP+ KIGIMPG I +KG +G++SRSGTLTYEAV Q S+ Sbjct: 117 AKEAAGGKKTLLLGPNCPGTITPEEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVAQLSE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+GQS+AVGIGGDP+ G + IDV+ LF D T++++M+GEIGG E +AA++ K+ Sbjct: 177 LGIGQSSAVGIGGDPINGLKHIDVMRLFNEDPDTDAVIMIGEIGGPDEADAARWCKEHM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKP+VGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G I +P+ +GR Sbjct: 236 ---KKPVVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFTITRNPSEMGRL 292 Query: 293 LVELL 297 L +L+ Sbjct: 293 LQKLI 297 >gi|86143292|ref|ZP_01061694.1| Succinyl-CoA ligase, alpha subunit [Leeuwenhoekiella blandensis MED217] gi|85830197|gb|EAQ48657.1| Succinyl-CoA ligase, alpha subunit [Leeuwenhoekiella blandensis MED217] Length = 290 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 154/298 (51%), Positives = 208/298 (69%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIEY-GTNVVGGVTPGKGGQTHLEK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A+ S+I+VPP+ A DAI+ES +A I +I+ ITEGIPV DM++ ++ Sbjct: 56 TVEDAVKETGADVSIIFVPPAFAADAIMESADAGIKVIIAITEGIPVADMIKAADYIKDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG +F+KG VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLIGPNCPGVITPGEAKVGIMPGFVFKKGKVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE++VM+GEIGG E +AA+++K G KP++ Sbjct: 176 IGIGGDPIIGTTTKEAVELLINDPETEAVVMIGEIGGQLEADAAKWIKA---SGTTKPVI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++SG A DK +KE G+ + SPA IG+ + ELL Sbjct: 233 GFIAGETAPAGRTMGHAGAIVSGEGESAADKKKILKENGVHVVDSPAEIGKKVAELLS 290 >gi|294631007|ref|ZP_06709567.1| succinyl-CoA synthetase, alpha subunit [Streptomyces sp. e14] gi|292834340|gb|EFF92689.1| succinyl-CoA synthetase, alpha subunit [Streptomyces sp. e14] Length = 294 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 144/300 (48%), Positives = 198/300 (66%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++K++KV+VQG+TG G HT+ +L T VVGG++P+K VPVF Sbjct: 1 MAIWLNKDSKVIVQGMTGATGMKHTK-LMLGDGTNVVGGVNPRKAGQTVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TV EA E+T A+ SVI+VP DA++E+I+AEIPL V ITEGI V D A + Sbjct: 60 TVKEAIEKTGADVSVIFVPEKFTKDAVVEAIDAEIPLAVVITEGIAVHDTAAFWAYAGKK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI+TP +GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGIITPGQSNVGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA F+K+ KP Sbjct: 178 TAVGIGGDPIIGTTHIDALAAFQADPDTDLIVMIGEIGGDAEERAAAFIKENV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P + E+L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAKLAREILA 293 >gi|57238882|ref|YP_180018.1| succinyl-CoA synthetase alpha chain [Ehrlichia ruminantium str. Welgevonden] gi|58578811|ref|YP_197023.1| succinyl-CoA synthetase alpha chain [Ehrlichia ruminantium str. Welgevonden] gi|58616870|ref|YP_196069.1| succinyl-CoA synthetase alpha chain [Ehrlichia ruminantium str. Gardel] gi|57160961|emb|CAH57867.1| succinyl-CoA synthetase, alpha subunit [Ehrlichia ruminantium str. Welgevonden] gi|58416482|emb|CAI27595.1| Succinyl-CoA synthetase alpha chain [Ehrlichia ruminantium str. Gardel] gi|58417437|emb|CAI26641.1| Succinyl-CoA synthetase alpha chain [Ehrlichia ruminantium str. Welgevonden] Length = 295 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 187/300 (62%), Positives = 227/300 (75%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+ NTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG TY +N+PVF Sbjct: 1 MSILVNSNTKVICQGFTGAHGTFHSEQAIAY-GTKMVGGVTPGKGGTYH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +AK + ANA+VIYVP A DAI+E+IEAEI LI+CITEGIP LDMV+VK L S Sbjct: 56 TVKQAKLQVGANATVIYVPAPYAADAILEAIEAEIELIICITEGIPTLDMVQVKRALCNS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S LIGPNCPGI+TP+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQST Sbjct: 116 KSILIGPNCPGIITPEECKIGIMPGYIHKRGHIGVISRSGTLTYEAVAQTTEAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G F D L+LF+ D T I+M+GEIGGS EEEAA+F+K G KPIV Sbjct: 176 IGIGGDPIHGMSFTDCLKLFINDPDTHGIIMIGEIGGSEEEEAAEFIK---LSGTTKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GFVAGKTAPPGR MGHAGA+ SG G AE KI MK AGI IA +PA IG+++ E + ++ Sbjct: 233 GFVAGKTAPPGRRMGHAGAISSGSSGSAESKIQIMKSAGIIIAETPAVIGKTMFEAMSNI 292 >gi|332526923|ref|ZP_08403016.1| succinyl-CoA synthetase subunit alpha [Rubrivivax benzoatilyticus JA2] gi|332111365|gb|EGJ11349.1| succinyl-CoA synthetase subunit alpha [Rubrivivax benzoatilyticus JA2] Length = 297 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 151/305 (49%), Positives = 209/305 (68%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILY--CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+T+V+ QG+TGK G FHT Y Q V G++PKK + G +P+ Sbjct: 1 MSILINKDTRVITQGITGKTGQFHTRMCRDYANGQNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 + +V EA +T A SVIYVPP+GA AI E++EAE+ L +CITEGIP+ DM ++ Sbjct: 57 YASVKEAAAQTGATVSVIYVPPAGAAAAIWEAVEAELDLAICITEGIPIKDMLEVRNKMK 116 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K + L+GPNCPG +TP+ KIGIMPG I +KG +G++SRSGTLTYEAV Q S+ Sbjct: 117 AKEAAGGKKTLLLGPNCPGTITPEEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVAQLSE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+GQS+AVGIGGDP+ G + +DV+ LF D T++++M+GEIGG E +AA++ K+ Sbjct: 177 LGIGQSSAVGIGGDPINGLKHLDVMRLFNEDPDTDAVIMIGEIGGPDEADAARWCKEHM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKP+VGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G I +P+ +GR Sbjct: 236 ---KKPVVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFTITRNPSEMGRL 292 Query: 293 LVELL 297 L +L+ Sbjct: 293 LQKLI 297 >gi|258592193|emb|CBE68502.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [NC10 bacterium 'Dutch sediment'] Length = 289 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 168/298 (56%), Positives = 219/298 (73%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD+ T+V+VQG+TGK GTFH A T+VV G+ P KG G +PVF Sbjct: 1 MSILVDRQTRVVVQGITGKEGTFHA-LACREYGTRVVAGVTPGKGGISHEG----IPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+ AN ++I+VP + A DAI+E+I+A IPL+VCITEGIP+LDMVRV L S Sbjct: 56 TVREAVEKEDANTALIFVPAAFAADAILEAIDAAIPLVVCITEGIPILDMVRVARILHGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI++PD K+GIMPG I R G VG++SRSGTLTYEAV Q ++ GLGQST Sbjct: 116 DTRLVGPNCPGIISPDQAKVGIMPGRIHRPGRVGVISRSGTLTYEAVNQLTRLGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT F+D L LF D ATE+I+M+GEIGG+AEEEAA F++ KP++ Sbjct: 176 IGIGGDPIIGTTFVDCLALFENDGATEAILMIGEIGGTAEEEAAAFVERHV----TKPVI 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VAG APP R MGHAGA+ISGG+G A +KI+A++ A I + +PA IG ++ +++G Sbjct: 232 AYVAGLAAPPERRMGHAGAIISGGRGTATEKISALRRADIAVVHNPADIGAAVKKVIG 289 >gi|261878943|ref|ZP_06005370.1| succinyl-CoA synthetase subunit alpha [Prevotella bergensis DSM 17361] gi|270334453|gb|EFA45239.1| succinyl-CoA synthetase subunit alpha [Prevotella bergensis DSM 17361] Length = 289 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 144/298 (48%), Positives = 199/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TKV+VQG+TG+ G+FH + Y T VVGG P K G +PVF Sbjct: 1 MSILINKDTKVIVQGITGRDGSFHASKMKEY-GTHVVGGTSPGKAGQEVDG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T AN S+I+VP + A DA++E+I+ I L+VCITEG+P LD V V+ Sbjct: 56 TVKDAVAATGANTSIIFVPAAFAKDAMLEAIDGGIQLLVCITEGVPTLDAVAVQRYARVK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPG+++P+ +GIMP ++F+KG G++SRSGTLTYE V + G+G STA Sbjct: 116 GVQVIGPNCPGLISPEESMVGIMPANVFKKGHTGVISRSGTLTYEVVANLAAAGMGVSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDPV G F D+L++F D T+SI ++GEIGG AEE AAQF+K KP+ Sbjct: 176 VGVGGDPVVGLYFEDLLQMFQDDPDTDSIALIGEIGGDAEERAAQFIKANV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F++G+ APPG+ MGHAGA+ISGG G A K+ A + G+ +A + I L ++LG Sbjct: 232 AFISGRQAPPGKQMGHAGAIISGGAGTAAGKVAAFEAVGVPVAKETSEIPELLKKMLG 289 >gi|150025053|ref|YP_001295879.1| succinyl-CoA synthetase, alpha subunit [Flavobacterium psychrophilum JIP02/86] gi|149771594|emb|CAL43066.1| Succinyl-CoA synthetase, alpha subunit [Flavobacterium psychrophilum JIP02/86] Length = 290 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 154/298 (51%), Positives = 213/298 (71%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH EQ I Y T VVGG+ P KG T ++ PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAEQMIEY-GTNVVGGVTPGKGGTMH----LDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E+ A+ ++I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DM++ ++ Sbjct: 56 TVKDAVEKAGADTTIIFVPPAFAADAIMEAADAGIKVIIAITEGIPVADMIKANDYIKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + RLIGPNCPGI+TP K+GIMPG +F+KG+VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 NCRLIGPNCPGIITPGEAKVGIMPGFVFKKGNVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D T IVM+GEIGG E +AA++++ + G +KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETHCIVMIGEIGGQLEADAAKWVRAD---GNRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG TAP GRTMGHAGA++ G AE K ++E GI + SPA IG+ + E+LG Sbjct: 233 GFIAGVTAPAGRTMGHAGAIVGGEDDTAEAKKRILRENGIHVVDSPAEIGKKVKEVLG 290 >gi|290558795|gb|EFD92189.1| succinyl-CoA synthetase, alpha subunit [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 289 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 143/298 (47%), Positives = 198/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DK+TKVLVQG+TG G FH++ A++ T+VV G+ P KG G V VF Sbjct: 1 MAILIDKDTKVLVQGITGHQGKFHSK-AMIDLGTKVVAGVTPGKGGERVNG----VRVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 V A E+T ANASV++VP D++IE+I+A I LI ITE +P DM+++ + Sbjct: 56 DVKTAVEKTGANASVVFVPALMTRDSVIEAIDAGIKLITIITEHVPFQDMLKINEYAKLK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPG+ P K+GI+P +I +KG VG++SRSGTLTYE V ++ GLG+ST Sbjct: 116 DVKIIGPNCPGLAAPGIGKLGIIPNTILKKGVVGVISRSGTLTYEIVNVITETGLGESTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGD V G FIDVL+LF D+ T IV+VGEIGG+ EE+AA F++ KKP+ Sbjct: 176 LGIGGDKVPGLNFIDVLKLFNEDKQTRGIVIVGEIGGNEEEKAADFIRKNV----KKPVF 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+ G APPG+ MGHAGA+ISG G A+ K+ A K+A + +A + + +V+ LG Sbjct: 232 AFIDGVYAPPGKRMGHAGAIISGKTGTAKSKLAAFKKANVPVAKTFDELSSLMVKKLG 289 >gi|145596324|ref|YP_001160621.1| succinyl-CoA synthetase subunit alpha [Salinispora tropica CNB-440] gi|145305661|gb|ABP56243.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Salinispora tropica CNB-440] Length = 295 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 138/301 (45%), Positives = 196/301 (65%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G+ HT + +L T +VGG++P+K T +PVF Sbjct: 1 MAIWLTKDSKVIVQGMTGSEGSKHTRR-MLAAGTDIVGGVNPRKAGTTVDFDGAELPVFA 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 +VA+A T AN +VI+VPP A+IE+I+A I L V ITEG+PV D A + Sbjct: 60 SVADAMRETGANVTVIFVPPQFTKGAVIEAIDAGISLAVVITEGVPVHDTAAFWAYNVAQ 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPGI++P + GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GERTRIIGPNCPGIVSPGASNAGIIPADITGAGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID L F D T++IVM+GEIGG AEE AA+F+K KP Sbjct: 178 TCVGIGGDPIIGTTHIDALAAFEDDPDTDAIVMIGEIGGDAEERAAEFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAPPG+TMGHAGA+ISG G AE K A++ AG+ + +P R + E++ Sbjct: 234 VVGYIAGFTAPPGKTMGHAGAIISGSAGTAEAKKTALEAAGVKVGKTPTETARLMREIMS 293 Query: 299 S 299 + Sbjct: 294 A 294 >gi|254443608|ref|ZP_05057084.1| succinyl-CoA synthetase, alpha subunit subfamily [Verrucomicrobiae bacterium DG1235] gi|198257916|gb|EDY82224.1| succinyl-CoA synthetase, alpha subunit subfamily [Verrucomicrobiae bacterium DG1235] Length = 307 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 153/302 (50%), Positives = 210/302 (69%), Gaps = 12/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ TK+++QG+TG+ G H ++ Y TQVV G+ P KG + +VP+F+ Sbjct: 1 MSILITPETKIIIQGITGEFGARHARLSLDY-GTQVVAGVTPGKGGQTFEHAGKSVPIFS 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VA+A T A SVI+VPP A DAI+E ++A++ L V ITEGIPV DMVRVK +E S Sbjct: 60 SVADAVAATGATVSVIFVPPPFAADAILECVDAKVELAVAITEGIPVRDMVRVKRAMEGS 119 Query: 121 SSRLIGPNCPGILTPDS-------CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 S+RL+GPNCPG+++P C+IGI PG I +KG VG++SRSGTLTYEAV+Q + + Sbjct: 120 STRLVGPNCPGLVSPGEGEDSSGGCRIGIAPGYIHKKGHVGVVSRSGTLTYEAVYQLTVK 179 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +GQST VGIGGDPV GT +DV++LF D T I+++GEIGG+AE EAA+++K+ Sbjct: 180 DIGQSTCVGIGGDPVNGTSHLDVIKLFNEDPDTHGIILIGEIGGNAEVEAARWIKENC-- 237 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+ GF+AG TAPPGR MGHAGA++ G + AE KI KE GI +A +P+ + +L Sbjct: 238 --TKPVAGFIAGATAPPGRRMGHAGAIVGGAEDTAEAKIAVFKECGIEVADTPSDMADAL 295 Query: 294 VE 295 + Sbjct: 296 LR 297 >gi|116669381|ref|YP_830314.1| succinyl-CoA synthetase subunit alpha [Arthrobacter sp. FB24] gi|116609490|gb|ABK02214.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Arthrobacter sp. FB24] Length = 300 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 144/307 (46%), Positives = 202/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K++KV+VQG+TG GT HT +L T +VGG++ +K T G+ + VF Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHTA-LMLKAGTNIVGGVNARKAGTTVLHGDNEITVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 TV EA T A+ S+++VPP+ DA++E+IEA I L+V ITEG+PV D A + Sbjct: 60 TVKEAMAETGADVSIVFVPPAFTKDAVVEAIEAGIGLVVVITEGVPVQDSAEFWALAQSK 119 Query: 119 -----KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 K +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 VDANGKQVTRIIGPNCPGIITPGEALVGITPANITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID LE F AD T++IVM+GEIGG AEE AA ++K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDALEAFEADPETKAIVMIGEIGGDAEERAADYIKAHV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + L Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAKLL 293 Query: 294 VELLGSL 300 E+ +L Sbjct: 294 REVYATL 300 >gi|313231207|emb|CBY08322.1| unnamed protein product [Oikopleura dioica] Length = 305 Score = 284 bits (728), Expect = 7e-75, Method: Composition-based stats. Identities = 170/299 (56%), Positives = 213/299 (71%), Gaps = 7/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 +SI + K++ +QG+TGK GTFH A+ Y TQVVGG+ P KG T G +P+F Sbjct: 9 LSIRIRKSSSRKIQGMTGKQGTFHAMGAMDY-GTQVVGGVTPGKGGTTHLG----LPIFN 63 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EK 119 TV EA E T ANA+ IYVPP A +I E++EAEIPL VCITEGIP +DMV+VK +L + Sbjct: 64 TVGEAMEATGANATAIYVPPFAAAKSIDEAVEAEIPLAVCITEGIPEMDMVQVKTKLVRQ 123 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RLIGPNCPGI+ CKIGIMP I G +GI+S+SGTLTYEAV QTS+ GLGQ+ Sbjct: 124 GKTRLIGPNCPGIIRAGQCKIGIMPADIHTDGIIGIVSKSGTLTYEAVQQTSEVGLGQTY 183 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK-KP 238 +GIGGD GT FID LELFL D T I+M+GEIGG AEE A+++LK +G KP Sbjct: 184 CIGIGGDAFSGTNFIDALELFLQDPKTRGILMIGEIGGGAEEAASEYLKVHNPQGPNHKP 243 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + GF+AG TAPPGR MGHAGA+ISGGKG A KI AMK+AGI + SPA +G++++ + Sbjct: 244 VAGFIAGVTAPPGRRMGHAGAIISGGKGTAAAKIAAMKDAGIHVTNSPAEMGKTILRAI 302 >gi|297618949|ref|YP_003707054.1| succinyl-CoA synthetase subunit alpha [Methanococcus voltae A3] gi|297377926|gb|ADI36081.1| succinyl-CoA synthetase, alpha subunit [Methanococcus voltae A3] Length = 287 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 134/295 (45%), Positives = 194/295 (65%), Gaps = 9/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL++++T+V+VQG+TG G FHT+ +L T +V G+ P K G +PVF +V Sbjct: 2 ILLNEDTRVIVQGITGNQGRFHTK-NMLETNTNIVAGVTPGKKGQNVQG----IPVFDSV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E E ANASVI++P A DA E+I+A + LI ITE IPV D + + +K Sbjct: 57 LETVEEYDANASVIFIPAPFAKDAAFEAIDAGLDLITIITEHIPVQDAIDIVNYGKKCGV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PG+ +P K+GI+P S+ ++G++G++SRSGTLTYE Q +Q G GQST VG Sbjct: 117 DIIGPNTPGLASPKVGKMGIIPMSVLKEGNIGMVSRSGTLTYEVANQLTQNGHGQSTCVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP+ G +I++LE F D+ T++IVM+GEIGGSAEEE A+ L KKP++ + Sbjct: 177 IGGDPIIGLRYIEILERFEKDDETDAIVMIGEIGGSAEEETAEKL----INKMKKPVISY 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG++AP G+ MGHAGA+I G G A+ K+ A++EAG +A + I + E++ Sbjct: 233 IAGQSAPEGKRMGHAGAIIEKGAGTAQSKMKALEEAGALVAKKISEIPTLINEVI 287 >gi|311748277|ref|ZP_07722062.1| succinyl-CoA synthase, alpha subunit [Algoriphagus sp. PR1] gi|126576772|gb|EAZ81020.1| succinyl-CoA synthase, alpha subunit [Algoriphagus sp. PR1] Length = 293 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 156/298 (52%), Positives = 214/298 (71%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+KV+VQG TG G+FH +Q I Y T VVGG+ P KG + PVF Sbjct: 1 MSVLVNKNSKVIVQGFTGSEGSFHAQQMIEY-GTNVVGGVTPGKGGSTHLEK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA + T A+ S+I+VPP+ A DAI+E+ EA I +I+ ITEGIPV DM++ K + + Sbjct: 56 SVEEAVQTTGADTSIIFVPPAFAADAIMEAAEAGIKVIIAITEGIPVADMMKAKPYIIER 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG++TP K+GIMPG +F++G +GI+S+SGTLTYEA Q ++ GLG STA Sbjct: 116 GATLIGPNCPGVITPGEAKVGIMPGFVFKQGRIGIVSKSGTLTYEAADQVAKAGLGVSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ++L + D T++IVM+GEIGG+ E EAA+++++ G KKP+V Sbjct: 176 IGIGGDPIIGTSTKQAVQLLMEDPETDAIVMIGEIGGNYEAEAAKWIRE---TGNKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+I G AE K+ M+E GI +A SPA IG ++ + LG Sbjct: 233 GFIAGQTAPPGRRMGHAGAIIGGADDTAEAKMRIMRENGIHVADSPAEIGATMAKALG 290 >gi|330470053|ref|YP_004407796.1| succinyl-CoA synthetase subunit alpha [Verrucosispora maris AB-18-032] gi|328813024|gb|AEB47196.1| succinyl-CoA synthetase subunit alpha [Verrucosispora maris AB-18-032] Length = 295 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 138/300 (46%), Positives = 196/300 (65%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KV+VQG+TG G+ HT + +L T VVGG++P+K T +PVF Sbjct: 1 MAIWLTKESKVIVQGMTGSEGSKHTRR-MLAAGTNVVGGVNPRKAGTTVDFDGAELPVFA 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 +V++A + T A+ +VI+VPP A+IE+I+AEIPL V ITEG+PV D A + Sbjct: 60 SVSDAMKETGADVTVIFVPPQFTKGAVIEAIDAEIPLAVVITEGVPVHDTAAFWAYNVAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPGI +P + GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GERTRIIGPNCPGIASPGASNAGIIPADITGAGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID L F AD T++IVM+GEIGG AEE AA+F+K KP Sbjct: 178 TCVGIGGDPIIGTTHIDALAAFEADPDTDAIVMIGEIGGDAEERAAEFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAPPG+TMGHAGA+ISG G A+ K A++ G+ + +P + + EL+ Sbjct: 234 VVGYIAGFTAPPGKTMGHAGAIISGSAGTADAKKAALEAVGVKVGKTPTETAKLMRELMS 293 >gi|326479950|gb|EGE03960.1| succinate-CoA ligase [Trichophyton equinum CBS 127.97] Length = 326 Score = 284 bits (728), Expect = 9e-75, Method: Composition-based stats. Identities = 167/294 (56%), Positives = 213/294 (72%), Gaps = 12/294 (4%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GT + T VVGG +PKK G PVF + Sbjct: 35 NLRINADTKVIFQGFTGKQGTVNA-----RIGTNVVGGTNPKKAGETHLGK----PVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + T A AS I+VPPS A +I ESI AE+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 86 VEEAVKETGATASAIFVPPSVAAKSIEESIAAEVPLVVCITEGIPQHDMVRITDMLKSQN 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 146 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA FLK E K KP V Sbjct: 206 VGIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAAFLKSENKA--NKPAV 263 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AG +APPGR MGHAGA++SGGKGGA+ KI+A+++AG+ + SPA +G++L+ Sbjct: 264 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALQDAGVIVERSPASLGKTLL 317 >gi|302869842|ref|YP_003838479.1| succinyl-CoA synthetase subunit alpha [Micromonospora aurantiaca ATCC 27029] gi|315501304|ref|YP_004080191.1| succinyl-CoA synthetase, alpha subunit [Micromonospora sp. L5] gi|302572701|gb|ADL48903.1| succinyl-CoA synthetase, alpha subunit [Micromonospora aurantiaca ATCC 27029] gi|315407923|gb|ADU06040.1| succinyl-CoA synthetase, alpha subunit [Micromonospora sp. L5] Length = 295 Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats. Identities = 135/300 (45%), Positives = 194/300 (64%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G+ HT + +L T VVGG++P+K T +PVF Sbjct: 1 MAIWLTKDSKVIVQGMTGSEGSKHTRR-MLAAGTNVVGGVNPRKAGTTVDFDGTELPVFA 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 +VA+A + T A+ +VI+VPP A++E+I+A I L V ITEG+PV D A + Sbjct: 60 SVADAMKETGADVTVIFVPPQFTKAAVVEAIDAGIDLAVVITEGVPVHDTAAFWAYNRAQ 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPGI +P + GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GERTRIIGPNCPGIASPGASNAGIIPADITGSGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID L F AD T++IVM+GEIGG AEE AA+F+K KP Sbjct: 178 TCVGIGGDPIIGTTHIDALAAFEADPETDAIVMIGEIGGDAEERAAEFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAPPG+TMGHAGA+ISG G A+ K A++ G+ + +P + E++ Sbjct: 234 VVGYIAGFTAPPGKTMGHAGAIISGSAGTADAKKAALEAVGVKVGKTPTETANLMREIMS 293 >gi|169628152|ref|YP_001701801.1| succinyl-CoA synthetase subunit alpha [Mycobacterium abscessus ATCC 19977] gi|169240119|emb|CAM61147.1| Succinyl-CoA synthetase, alpha chain [Mycobacterium abscessus] Length = 300 Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats. Identities = 149/307 (48%), Positives = 207/307 (67%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQVVGG++ +K T + G +V+ Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHTA-LMLKAGTQVVGGVNARKAGTTVSHVDKSGQSVD 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA + T A+ S+ +VPP+ + DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAIKETGADVSIAFVPPAFSKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + + +R+IGPNCPGI+TP +GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 YNVEKGNKTRIIGPNCPGIITPGEALVGITPNNITGTGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKIIVMIGEIGGDAEERAADYIKANVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSETAKLA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILQSL 300 >gi|257092291|ref|YP_003165932.1| succinyl-CoA synthetase subunit alpha [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044815|gb|ACV34003.1| succinyl-CoA synthetase, alpha subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 297 Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats. Identities = 151/305 (49%), Positives = 204/305 (66%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TK++ QG+TGK G FHTE+ Y V G++PKK G +P+ Sbjct: 1 MSILINKDTKIITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGESIFG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 F +V +A +T A SVIYVPP GA AI E++EA++ L+VCITEGIPV DM + Sbjct: 57 FGSVKDAAAQTGATVSVIYVPPPGAAAAIWEAVEADLDLVVCITEGIPVRDMLVVRNKML 116 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ Sbjct: 117 RKEAAGGKKTLLLGPNCPGLITPDEVKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVG GGDP+ G + ID++ LF D T++++M+GEIGG E +AA + K Sbjct: 177 IGLGQSSAVGTGGDPINGLKHIDIMRLFNDDPDTDAVIMIGEIGGPDEADAAVWCKANM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G + P+ +G+ Sbjct: 236 ---KKPIVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFTVTRDPSEMGKL 292 Query: 293 LVELL 297 + L+ Sbjct: 293 IKALI 297 >gi|302555348|ref|ZP_07307690.1| succinyl-CoA synthetase subunit alpha [Streptomyces viridochromogenes DSM 40736] gi|302472966|gb|EFL36059.1| succinyl-CoA synthetase subunit alpha [Streptomyces viridochromogenes DSM 40736] Length = 293 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 134/298 (44%), Positives = 190/298 (63%), Gaps = 7/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KVLVQG+TG G HT + +L T +VGG++P+K + VPVF Sbjct: 1 MAIYLTKESKVLVQGMTGGEGMKHTRR-MLAAGTNIVGGVNPRKAGRTVDFDDRAVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+ T A+ +V++VPP+ A A+ E+ +A I L V ITEGIPV D V A E+ Sbjct: 60 TVADGMRATGADVTVVFVPPAFAKAAVTEAADAGIGLAVVITEGIPVHDSVAFTAYAERQ 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R++GPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G ST Sbjct: 120 GTRVVGPNCPGLITPGQSNAGIIPADIAKPGRIGLVSKSGTLTYQLMYELRD--IGFSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L F D TE IV++GEIGG AEE AA +++ KP+V Sbjct: 178 VGIGGDPVVGTSHIDCLAAFQDDPDTELIVLIGEIGGDAEERAAAHVREHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P R ++ L Sbjct: 234 GYIAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVSVGSTPTETARLVLARLE 291 >gi|121596330|ref|YP_988226.1| succinyl-CoA synthetase subunit alpha [Acidovorax sp. JS42] gi|120608410|gb|ABM44150.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Acidovorax sp. JS42] Length = 297 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 154/305 (50%), Positives = 207/305 (67%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+TKV+ QG+TGK G FHTE+ Y V G++PKK ++P+ Sbjct: 1 MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGEKI----FDIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 F +V +A + T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM ++ Sbjct: 57 FGSVKDAAKETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMK 116 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K + L+GPNCPG++TPD KIGIMPG I +KG VG++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKRTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRVGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+GQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAA++ K Sbjct: 177 LGIGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAARWCKANM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G I +P+ + R Sbjct: 236 ---KKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFTITRNPSEMARL 292 Query: 293 LVELL 297 L LL Sbjct: 293 LKGLL 297 >gi|160896317|ref|YP_001561899.1| succinyl-CoA synthetase subunit alpha [Delftia acidovorans SPH-1] gi|160361901|gb|ABX33514.1| succinyl-CoA synthetase, alpha subunit [Delftia acidovorans SPH-1] Length = 297 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 157/305 (51%), Positives = 210/305 (68%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+TKV+ QG+TGK G FHTE+ I Y V G++PKK +VP+ Sbjct: 1 MSIYINKDTKVITQGITGKTGQFHTEKCIEYANGKNCFVAGVNPKKAGEKI----FDVPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 + +V EA + T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM +R Sbjct: 57 YASVKEAAQGTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMR 116 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K + L+GPNCPG++TPD KIGIMPG I +KG +G++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKRTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+GQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAA++ KD Sbjct: 177 LGIGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAARWCKDNM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G I +P+ +GR Sbjct: 236 ---KKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFVITRNPSEMGRL 292 Query: 293 LVELL 297 L L+ Sbjct: 293 LKGLI 297 >gi|256810340|ref|YP_003127709.1| succinyl-CoA synthetase, alpha subunit [Methanocaldococcus fervens AG86] gi|256793540|gb|ACV24209.1| succinyl-CoA synthetase, alpha subunit [Methanocaldococcus fervens AG86] Length = 288 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 149/295 (50%), Positives = 206/295 (69%), Gaps = 10/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NT+ +VQG+TG+ G+FHT++ +L C T++VGG+ P KG G VPVF TV Sbjct: 2 ILLDENTRAIVQGITGRQGSFHTKK-MLECGTKIVGGVTPGKGGQEVHG----VPVFDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA + T ANASVI+VP A DA+ E+I+A I LIV ITE IPV D + E+ Sbjct: 57 KEAVKETDANASVIFVPAPFAKDAVFEAIDAGIDLIVVITEHIPVHDTMEFVNYAEEVGV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++IGPN PGI +P K+GI+P + ++GSVGI+SRSGTLTYE Q + G G ST VG Sbjct: 117 KIIGPNTPGIASPKVGKLGIIPMEVLQEGSVGIVSRSGTLTYEIAHQIKKAGFGVSTCVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP+ G + +VL+LF D TE+IVM+GEIGG AEEEAA+F+K +KP++G+ Sbjct: 177 IGGDPIVGLRYREVLDLFEKDGETEAIVMIGEIGGGAEEEAAKFIK-----NMEKPVIGY 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG++AP G+ MGHAGA++ GKG AE K+ A+++AG +A + + I + L E+L Sbjct: 232 IAGQSAPEGKRMGHAGAIVEKGKGTAESKMRALEDAGAYVARNISDIPKLLAEIL 286 >gi|239818149|ref|YP_002947059.1| succinyl-CoA synthetase subunit alpha [Variovorax paradoxus S110] gi|239804726|gb|ACS21793.1| succinyl-CoA synthetase, alpha subunit [Variovorax paradoxus S110] Length = 297 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 151/305 (49%), Positives = 206/305 (67%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+TKV+ QG+TGK G FHTE+ Y V G++PKK N+P+ Sbjct: 1 MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGESI----FNIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 F +V EA +T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM ++ Sbjct: 57 FGSVKEAASQTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMK 116 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E +AA++ K+ Sbjct: 177 IGLGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEADAARWCKEHM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + + + + + Sbjct: 236 ---KKPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFTVTRNFSELAKL 292 Query: 293 LVELL 297 L L Sbjct: 293 LKAQL 297 >gi|149914670|ref|ZP_01903200.1| succinyl-CoA synthetase subunit alpha [Roseobacter sp. AzwK-3b] gi|149811463|gb|EDM71298.1| succinyl-CoA synthetase subunit alpha [Roseobacter sp. AzwK-3b] Length = 293 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 139/301 (46%), Positives = 194/301 (64%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+D +TKVLV G TG+ GTFHT Q ++ T VVGG+ P KG + G +PVF Sbjct: 1 MAILIDSDTKVLVTGFTGRIGTFHT-QDMITHGTNVVGGVTPGKGGSTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A T A + +VPP A D+I+E+ +A I VCI +GIP DM+RVK + + Sbjct: 56 TVKGAVAETGAELVISFVPPPFAADSIMEAADAGIKTCVCIADGIPAADMIRVKRYMRRY 115 Query: 121 S----SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 RLIGPNC GI+TP G+MP I+ G VGI+ RSGTL YEA Q +G+G Sbjct: 116 KADRRMRLIGPNCAGIITPGQAFAGLMPPHIYMPGRVGIVGRSGTLGYEAASQMKAKGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+++GIGGDP+ G+ F D+LELF AD T+++VMVGEIGG E EAA++++ Sbjct: 176 VSSSIGIGGDPINGSSFRDILELFEADPDTDAVVMVGEIGGPQEAEAAEYIETHM----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+ +VAG +AP GR MGHAGA++S A++K+ +K +G+ I P+P+ G ++ ++ Sbjct: 232 KPVAAYVAGLSAPKGRRMGHAGAIVSAFGESAQEKVEILKSSGVTIVPTPSAFGETVAKM 291 Query: 297 L 297 L Sbjct: 292 L 292 >gi|195043171|ref|XP_001991567.1| GH12731 [Drosophila grimshawi] gi|193901325|gb|EDW00192.1| GH12731 [Drosophila grimshawi] Length = 334 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 161/297 (54%), Positives = 213/297 (71%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K TKV+VQG TGK TFH+ ++ Y T++VGG+ PKKG T +++ PVF Sbjct: 30 NLKINKETKVMVQGFTGKQATFHSTESKAY-GTKIVGGVSPKKGGT----KHLDAPVFKD 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + +A+VI++PP A I E+IE EI LIV ITEGIP +DMVR+ L + Sbjct: 85 VKEAVKELKPDATVIFIPPPNAAHGICEAIENEIGLIVVITEGIPQMDMVRIMQMLNCQE 144 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++ D CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 145 KSRLLGPNCPGIISADQCKIGIMPGHIHKRGLVGIVSRSGTLTYEAVHQTTNVGLGQTLC 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDP GT FID L++FL D+ T+ I+++GEIGG+AEEEAA++L KP+V Sbjct: 205 IGVGGDPFNGTNFIDALKIFLPDKETKGIILIGEIGGTAEEEAAEYLTKHNTGCEAKPVV 264 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKGGA DK+ A+K AG+ IA +P +G L + Sbjct: 265 AFIAGITAPPGRRMGHAGAIISGGKGGAADKLKALKAAGVVIALNPCHLGTLLHAEM 321 >gi|15678591|ref|NP_275706.1| succinyl-CoA synthetase subunit alpha [Methanothermobacter thermautotrophicus str. Delta H] gi|6647834|sp|O26663|SUCD_METTH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|2621640|gb|AAB85069.1| succinyl-CoA synthetase, alpha subunit [Methanothermobacter thermautotrophicus str. Delta H] Length = 293 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 140/296 (47%), Positives = 189/296 (63%), Gaps = 11/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D++T+ LVQG+TGK G+FHT Q + Y T++V G+ P KG + G V V+ +V Sbjct: 7 ILLDEDTRCLVQGITGKQGSFHTRQMLEY-GTRIVAGVTPGKGGQEFLG----VDVYNSV 61 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E E NAS+I+VP A DA ESI + L+V ITE IPV D +++ + Sbjct: 62 EEVTEEMDVNASIIFVPAPFAKDAAFESI-KHLDLVVIITEHIPVHDSMQIMEYASRMGK 120 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PGI+TP K+GIMP IF +G++GI+SRSGTLTYE Q ++ G GQST VG Sbjct: 121 TVIGPNTPGIITPGIGKLGIMPTHIFTEGTIGIVSRSGTLTYEFAAQLTEAGFGQSTCVG 180 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV G F+DVLE F D T+++V++GEIGG AEE AA +++ KP+ F Sbjct: 181 IGGDPVTGLGFVDVLERFEDDPGTDAVVLIGEIGGDAEERAASYIEQ-----MSKPVFAF 235 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++G TAPPG+ MGHAGA+I GG G A K A++ AG + P+ I + LG Sbjct: 236 ISGATAPPGKRMGHAGAIIEGGTGTASSKREALEAAGAVVVDRPSAIVDEIRAQLG 291 >gi|311896478|dbj|BAJ28886.1| putative succinyl-CoA synthetase alpha chain [Kitasatospora setae KM-6054] Length = 297 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 142/301 (47%), Positives = 201/301 (66%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT + +L TQ+VGG++P+K T VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGSEGMKHTRR-MLASGTQIVGGVNPRKAGTTVDVDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 TVAEA E+T A+ +VI+VPP+ A++E+I+AEIPL V ITEG+PV D A + Sbjct: 60 TVAEAIEKTGADVTVIFVPPAFTKSAVVEAIDAEIPLAVVITEGVPVHDTAAFWAHAGAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG+++P GI+P +I G +G++S+SGTLTY+ +++ LG S Sbjct: 120 GNKTRIIGPNCPGLISPGQSNAGIIPANITGPGKIGLVSKSGTLTYQLMYELRD--LGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L+ F D TE IVM+GEIGG AEE AA ++ + KP Sbjct: 178 SAVGIGGDPVIGTTHIDALKAFQEDPETELIVMIGEIGGDAEERAAAYIAEHV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ R EL+ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSETARLARELIA 293 Query: 299 S 299 + Sbjct: 294 A 294 >gi|301629459|ref|XP_002943857.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-like [Xenopus (Silurana) tropicalis] Length = 298 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 153/306 (50%), Positives = 208/306 (67%), Gaps = 16/306 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+TKV+ QG+TGK G FHTE+ Y + V G++PKK N+P+ Sbjct: 1 MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKHCFVAGVNPKKAGESI----FNIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 ++TV EA ++T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM ++ Sbjct: 57 YSTVKEAAQQTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMK 116 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K + L+GPNCPG++TPD KIGIMP I RKG +G++SRSGTLTYEAV ++ Sbjct: 117 AKQAAGGKKTLLLGPNCPGLITPDEIKIGIMPXHIHRKGRIGVVSRSGTLTYEAVAMLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAAQ+ K Sbjct: 177 VGLGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAAQWCKAHM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + +P+ +G+ Sbjct: 236 ---KKPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLATMQECGFVVTRNPSELGKL 292 Query: 293 LVELLG 298 L L Sbjct: 293 LKAQLK 298 >gi|159901078|ref|YP_001547325.1| succinyl-CoA synthetase subunit alpha [Herpetosiphon aurantiacus ATCC 23779] gi|159894117|gb|ABX07197.1| succinyl-CoA synthetase, alpha subunit [Herpetosiphon aurantiacus ATCC 23779] Length = 293 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 156/300 (52%), Positives = 212/300 (70%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL DKNT+++VQG+TG+ G FH+ Q + Y T +VGG+ P +G G VPVF Sbjct: 1 MSILADKNTRLIVQGITGREGEFHSRQMLEY-GTNLVGGVTPGRGGQKAVDGR--VPVFN 57 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T ANA+VIYVP + A DA+ E+ +A IPLIVCITEG+P LDMV ++ Sbjct: 58 TVKQAVKETGANATVIYVPAAFAPDAVREAADAGIPLIVCITEGVPALDMVATYEFVKLK 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPG+LTP K+GI+PGSI + G VG++S+SGTLTYEAV ++ GLGQ++ Sbjct: 118 GSRLIGPNCPGLLTPGEAKLGIIPGSIAKPGPVGVVSKSGTLTYEAVDALTRIGLGQTSI 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FIDVL +F AD ATE+IV++GEIGG+AE++AA F+K+ KP+V Sbjct: 178 VGIGGDPIIGTNFIDVLAMFQADPATEAIVLIGEIGGNAEQDAAAFIKENV----TKPVV 233 Query: 241 GFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG++APPG+ M + +GG+G A++KI A++ G +A P I + + E LG Sbjct: 234 SFIAGQSAPPGKRMGHAGAIIGAGGEGTAQEKIEALEAVGAKVAKLPTDIAKLVAESLGK 293 >gi|225012880|ref|ZP_03703313.1| succinyl-CoA synthetase, alpha subunit [Flavobacteria bacterium MS024-2A] gi|225003002|gb|EEG40979.1| succinyl-CoA synthetase, alpha subunit [Flavobacteria bacterium MS024-2A] Length = 290 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 157/298 (52%), Positives = 209/298 (70%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K++VQG TG GTFH Q I Y T +VGG+ P KG PVF Sbjct: 1 MSVLVNKNSKIIVQGFTGSEGTFHATQMIEY-GTNIVGGVTPGKGGQTHLDK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA + A+ ++I+VPP+ A DAI+E+ EA I +I+ ITEGIPV DM + A ++ Sbjct: 56 SVAEAVKTAGADTTIIFVPPAFAADAIMEAAEAGIKVIITITEGIPVNDMTKAYAYVKSQ 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG++TP+ K+GIMPG +F+KG VGI+S+SGTLTYEA Q +GLG STA Sbjct: 116 GATLIGPNCPGVITPEEAKVGIMPGFVFKKGRVGIVSKSGTLTYEASDQVVAQGLGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT D +ELF+ D T+ IVM+GEIGG E +AAQ++K G KP++ Sbjct: 176 IGIGGDPIIGTTTKDAVELFMNDSETDCIVMIGEIGGQLEADAAQWIKAN---GNMKPVI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + AE K M+E GI + SPA+IG + E+LG Sbjct: 233 GFIAGETAPKGRTMGHAGAIVGGSEDTAEAKKRIMRECGIHVVDSPAQIGAKVAEVLG 290 >gi|253698898|ref|YP_003020087.1| succinyl-CoA synthetase, subunit alpha [Geobacter sp. M21] gi|251773748|gb|ACT16329.1| succinyl-CoA synthetase, alpha subunit [Geobacter sp. M21] Length = 298 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 162/297 (54%), Positives = 217/297 (73%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K ++++VQG+TG++G FHT+Q Y + VV G+ P KG + G +PVF Sbjct: 1 MSILINKASRIVVQGITGRSGLFHTQQCREY-GSNVVAGVTPGKGGIHIEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + T+AN S+I+VPP GA DAI+E+ A + L VCITEGIPV DMV VKA L++S Sbjct: 56 TVAEAVKYTSANVSMIFVPPPGAADAILEAAAAGLELAVCITEGIPVRDMVPVKAVLQQS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP CKIGIMPG I + G +G++SRSGTLTYEAV Q + GLGQS+ Sbjct: 116 KMRLVGPNCPGVITPGECKIGIMPGHIHKPGKIGVVSRSGTLTYEAVKQLTDMGLGQSSC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G F+DVL++F D TE + M+GEIGG+AEEEAA +++ KKP+ Sbjct: 176 VGIGGDPIIGMSFVDVLKMFNEDPGTEGVFMIGEIGGAAEEEAAVWIQKHM----KKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPG+ MGHAGA+I+GGKG A DKI + E G+ +A SP ++G ++ + Sbjct: 232 AFIAGVTAPPGKRMGHAGAIITGGKGKAADKIRTLTECGVTVATSPTKMGEAMQTAM 288 >gi|68163283|dbj|BAE02672.1| succinyl-CoA synthetase small subunit [Hydrogenobacter thermophilus] Length = 272 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 155/278 (55%), Positives = 204/278 (73%), Gaps = 11/278 (3%) Query: 22 TFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPS 81 +FH Q Y TQVV G+ P KG G +PVF TV EA + T AN S+I+VPP+ Sbjct: 1 SFHAAQCKAY-GTQVVAGVTPGKGGQSVEG----IPVFNTVEEAVQETNANCSLIFVPPA 55 Query: 82 GAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS--SRLIGPNCPGILTPDSCK 139 A DAI+E+++A I LIVCITEG+PV DM+ VK + K+ ++LIGPNCPG++TP K Sbjct: 56 FAADAIVEALDAGIELIVCITEGVPVKDMMMVKDYMRKNYPSAKLIGPNCPGVITPGEAK 115 Query: 140 IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL 199 +GIMPG +F++GSVGI+SRSGTLTYEA +Q + GLGQSTAVGIGGDPV G DV+ + Sbjct: 116 VGIMPGHVFKRGSVGIVSRSGTLTYEAAYQLTMVGLGQSTAVGIGGDPVHGLSHKDVISM 175 Query: 200 FLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGA 259 F D TE+I+++GEIGG+AEEEAA+++K KKP+ ++AG TAPPGR MGHAGA Sbjct: 176 FNEDPETEAILIIGEIGGTAEEEAAEYIKHHV----KKPVFAYIAGITAPPGRRMGHAGA 231 Query: 260 VISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +ISGG+G A+ K+ A++EAG+ + +PA IG+SL ELL Sbjct: 232 IISGGRGTAQAKMQALREAGVYVIENPAFIGKSLQELL 269 >gi|325001242|ref|ZP_08122354.1| succinyl-CoA synthetase subunit alpha [Pseudonocardia sp. P1] Length = 295 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 146/301 (48%), Positives = 202/301 (67%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +++N+KV+VQG+TG GT H + I T +VGG++ +K T T G+ +V V+ Sbjct: 1 MSIFLNENSKVIVQGITGGEGTKHATKMIA-SGTNIVGGVNARKAGTTHTVGDKDVTVYG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 TV EA + T A+ SV++VPP A DA+IE+I+AEIPL V ITEGIPV D A + Sbjct: 60 TVEEAMKETGADVSVLFVPPKFAKDAVIEAIDAEIPLAVVITEGIPVHDSAYFWAHAVAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI++P GI+P +I G +G++S+SGTLTY+ +F+ + G S Sbjct: 120 GNKTRIIGPNCPGIISPGKSNAGIIPANIAGPGKIGLVSKSGTLTYQMMFELRE--FGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDPV GT ID LE F AD TE+IVM+GEIGG AEE AA F+K KP Sbjct: 178 TAIGIGGDPVIGTTHIDALEAFEADPDTEAIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + G+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + E+L Sbjct: 234 VAGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAALMKEILS 293 Query: 299 S 299 + Sbjct: 294 A 294 >gi|118474078|ref|YP_892080.1| succinyl-CoA synthetase, alpha subunit [Campylobacter fetus subsp. fetus 82-40] gi|118413304|gb|ABK81724.1| succinyl-CoA synthetase, alpha subunit [Campylobacter fetus subsp. fetus 82-40] Length = 290 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 149/300 (49%), Positives = 192/300 (64%), Gaps = 12/300 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNTKV+VQG TGK TFH EQ + Y T +VGG+ P KG G PVF Sbjct: 1 MSILVDKNTKVIVQGFTGKEATFHAEQCLAY-GTNIVGGVTPFKGGMIHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A S+I+VP +IIE+ +A I L V ITE PV DM+ K K Sbjct: 56 TVVEAVKSTNATVSLIFVPAKFVAASIIEAADAGIELAVVITEHTPVRDMLEAKNYANKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKG--SVGILSRSGTLTYEAVFQTSQEGLGQS 178 +LIGPNCPGI++ D K+GIMP +F++ ++G++S+SGTLTYE Q EG G S Sbjct: 116 GMKLIGPNCPGIISADQAKLGIMPAMVFKRAGVNIGLISKSGTLTYEGANQILSEGYGIS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGD V G + ++L +F D T++IVM+GEIGGS E EA +K KKP Sbjct: 176 TAVGIGGDSVIGLTYSELLPMFENDPDTKAIVMIGEIGGSLEIEACNIIK-----NMKKP 230 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V F+AG++AP G+ MGHAGA+ISG A K+ A+ AG + SPA IG+ + EL+G Sbjct: 231 VVAFIAGQSAPKGKRMGHAGAIISGEDSTAAGKMKALSAAGAHVVASPAHIGKKIKELIG 290 >gi|150402129|ref|YP_001329423.1| succinyl-CoA synthetase subunit alpha [Methanococcus maripaludis C7] gi|150033159|gb|ABR65272.1| succinyl-CoA synthetase, alpha subunit [Methanococcus maripaludis C7] Length = 287 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 132/295 (44%), Positives = 193/295 (65%), Gaps = 9/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NT+ +VQG+TG G FHT+ +L C T +V G+ P KG G +PV+ TV Sbjct: 2 ILLDENTRAIVQGITGNQGKFHTK-NMLECNTNIVAGVTPGKGGQDVYG----IPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E E+ ANAS+I++P DA E+I+A I L+ ITE IP+ D + + A +K Sbjct: 57 LETVEKYDANASLIFIPAPFVKDAAYEAIDAGIDLVTIITEHIPIQDSMDIVAYGKKHGV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PG+ +P K+GI+P SI ++G++G++SRSGTLTYE Q + GQS+ VG Sbjct: 117 NIIGPNTPGLASPKVGKLGIIPMSILKEGNIGMVSRSGTLTYEIASQLTSSNYGQSSCVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP+ G +I+VLE+F D T+++VMVGEIGG+AEE AA+ + KKP++ + Sbjct: 177 IGGDPITGLRYIEVLEMFEKDSETDAVVMVGEIGGNAEENAAEKM----ISKMKKPVISY 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG++AP G+ MGHAGA+I G G A+ K+ A++ AG +A + I L E++ Sbjct: 233 IAGQSAPEGKRMGHAGAIIEKGVGTAKSKMEALENAGAHVAKRISDIPLLLKEII 287 >gi|149201847|ref|ZP_01878821.1| succinyl-CoA synthetase subunit alpha [Roseovarius sp. TM1035] gi|149144895|gb|EDM32924.1| succinyl-CoA synthetase subunit alpha [Roseovarius sp. TM1035] Length = 294 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 140/302 (46%), Positives = 196/302 (64%), Gaps = 13/302 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I++DKN++VLV GLTG+ G+FHT Q ++ T VVGG+ P KG T G +PVF Sbjct: 2 MAIIIDKNSRVLVTGLTGRIGSFHT-QDMINHGTNVVGGVTPGKGGTKHNG----LPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A T A+ + +VPP A D+I+E+ +A I VCI +GIP DM++VK + + Sbjct: 57 TVKGAVAETGADLVICFVPPPFAADSIMEAADAGITTCVCIADGIPASDMIKVKRYMRRY 116 Query: 121 S----SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 RLIGPNC GI+TP G+MP I++ G VGI+ RSGTL YEA Q + G+G Sbjct: 117 KAEKRMRLIGPNCAGIITPGQAFAGLMPPHIYKPGRVGIIGRSGTLGYEAASQMKERGIG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+LELF DE T+++VMVGEIGG E EAA +++D Sbjct: 177 VSTSVGIGGDPINGSSFRDILELFENDEGTDAVVMVGEIGGPQEAEAAAYIRDHMS---- 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+ ++AG +AP GR MGHAGA++S A++K+ + EAG+ I P+P+ G + + Sbjct: 233 KPVAAYIAGLSAPKGRRMGHAGAIVSAFGESAQEKVEILSEAGVTIVPTPSSFGEVVARM 292 Query: 297 LG 298 + Sbjct: 293 VA 294 >gi|239943708|ref|ZP_04695645.1| succinyl-CoA synthetase subunit alpha [Streptomyces roseosporus NRRL 15998] gi|239990158|ref|ZP_04710822.1| succinyl-CoA synthetase subunit alpha [Streptomyces roseosporus NRRL 11379] gi|291447170|ref|ZP_06586560.1| succinyl-CoA synthetase subunit alpha [Streptomyces roseosporus NRRL 15998] gi|291350117|gb|EFE77021.1| succinyl-CoA synthetase subunit alpha [Streptomyces roseosporus NRRL 15998] Length = 294 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 143/301 (47%), Positives = 199/301 (66%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT+ +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGATGMKHTK-LMLGDGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E+T AN SV++VPP+ + A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 SVKEAMEKTGANVSVLFVPPAFSKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAYANEK 119 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA F+K KP Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P + E+LG Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAKLAREILG 293 Query: 299 S 299 + Sbjct: 294 A 294 >gi|220917420|ref|YP_002492724.1| succinyl-CoA synthetase, alpha subunit [Anaeromyxobacter dehalogenans 2CP-1] gi|219955274|gb|ACL65658.1| succinyl-CoA synthetase, alpha subunit [Anaeromyxobacter dehalogenans 2CP-1] Length = 341 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 172/300 (57%), Positives = 223/300 (74%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD+NT+VLVQG+TG AG+FH EQ + Y T VV G+ P +G T + G VP+F Sbjct: 1 MSILVDRNTRVLVQGITGSAGSFHAEQMLAY-GTNVVAGVTPNRGGTRFQGT---VPIFH 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TVA A + T ANA+ I+VPP A DAIIE+ E++I LIV ITEGIPVLDMVRV+ +E + Sbjct: 57 TVAAAVKETGANAAAIFVPPPFAADAIIEAAESDIELIVAITEGIPVLDMVRVRRYVESR 116 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPG++TP CKIGIMPG + R G +G++SRSGTL YEAV Q S GLGQST Sbjct: 117 PKTRLVGPNCPGVITPGQCKIGIMPGHVHRPGRIGVVSRSGTLNYEAVKQLSDLGLGQST 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +VGIGGDPV GT+F+ L+LF D T++++M+GEIGG EE+ A+F++D KP+ Sbjct: 177 SVGIGGDPVHGTDFVQALQLFEDDPETDAVIMIGEIGGGEEEKGAEFVRDHM----TKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VGF+AG+TAPPG+ MGHAGAVISGG G A+ K+ AM+EAGI + P +GR++ + L Sbjct: 233 VGFIAGRTAPPGKRMGHAGAVISGGAGTADAKMAAMREAGIVVVDGPHLLGRAMKDALSR 292 >gi|256397086|ref|YP_003118650.1| succinyl-CoA synthetase subunit alpha [Catenulispora acidiphila DSM 44928] gi|256363312|gb|ACU76809.1| succinyl-CoA synthetase, alpha subunit [Catenulispora acidiphila DSM 44928] Length = 295 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 139/302 (46%), Positives = 202/302 (66%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + +N+KV+VQG+TG G HT++ +L TQ+VGG++P+K T VPVF Sbjct: 1 MAIFLTENSKVIVQGMTGSEGMKHTKR-MLASGTQIVGGVNPRKAGTAVDVDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 TVAEA + T A+ SV++VPP+ A +E+++AEI L V ITEG+PV D V A + Sbjct: 60 TVAEAMKETGADVSVVFVPPAFTKAAALEAVDAEIELCVIITEGVPVHDTAEVWAYNLAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+P +I + G +G++S+SGTLTY+ +++ G S Sbjct: 120 GAKTRIIGPNCPGLITPGKSNAGIIPATITKAGKIGLVSKSGTLTYQMMYELRD--FGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV GT ID L+ F D T +IVM+GEIGG AEE AA ++K+ KP Sbjct: 178 TAVGIGGDPVIGTTHIDCLQAFQDDPDTAAIVMIGEIGGDAEERAAAYIKEHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ G+ + +P+ + + E++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKQEALEAVGVKVGKTPSATAQLMREIMQ 293 Query: 299 SL 300 +L Sbjct: 294 AL 295 >gi|51893670|ref|YP_076361.1| succinyl-CoA synthetase alpha subunit [Symbiobacterium thermophilum IAM 14863] gi|51857359|dbj|BAD41517.1| succinyl-CoA synthetase alpha subunit [Symbiobacterium thermophilum IAM 14863] Length = 290 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 143/299 (47%), Positives = 199/299 (66%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++++D+NT+ +VQG+TG G FHT Q + + T +VGG++ KK G VPVF Sbjct: 1 MAVIIDRNTRAIVQGITGSQGQFHTGQMLAF-GTNIVGGVNFKKAGQQVQG----VPVFA 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T ANASV++VP G DA E+I A I ++V I E +P + + + A ++ Sbjct: 56 TVHEAVEKTGANASVMFVPAPGVKDAAFEAIHAGIKVLVLIPEHVPTQETMEIMAYAKRH 115 Query: 121 SSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPN GI++P CK+GIMP I++ G VGI++RSGTL+YE F S GLGQ+T Sbjct: 116 GVRVIGPNTFGIISPGEKCKLGIMPNHIYKPGPVGIVARSGTLSYEIAFNLSNAGLGQTT 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +G+GGD V GT F+D LELF AD ATE+IVMVGEIGG EE AA+++K + KP+ Sbjct: 176 VIGMGGDRVIGTNFVDALELFNADPATEAIVMVGEIGGIQEELAAEYIKQHVR----KPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V ++AGK+APPG+ MGHAGA+I G +G + K+ A+ AG+ +A P I + E L Sbjct: 232 VAYLAGKSAPPGKRMGHAGAIIEGNRGTYQSKVEALTAAGVKVAALPWEIVDLVREALK 290 >gi|319796537|ref|YP_004158177.1| succinyL-CoA synthetase, alpha subunit [Variovorax paradoxus EPS] gi|315599000|gb|ADU40066.1| succinyl-CoA synthetase, alpha subunit [Variovorax paradoxus EPS] Length = 297 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 151/305 (49%), Positives = 206/305 (67%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+TKV+ QG+TGK G FHTE+ Y V G++PKK N+P+ Sbjct: 1 MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKNAFVAGVNPKKAGESI----FNIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 F +V EA +T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM ++ Sbjct: 57 FGSVKEAASQTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMK 116 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E +AA++ K+ Sbjct: 177 IGLGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEADAARWCKEHM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKP+VGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + + + + + Sbjct: 236 ---KKPVVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFTVTRNFSELAKL 292 Query: 293 LVELL 297 L L Sbjct: 293 LKAKL 297 >gi|85706353|ref|ZP_01037447.1| succinyl-CoA synthetase alpha subunit [Roseovarius sp. 217] gi|85669126|gb|EAQ23993.1| succinyl-CoA synthetase alpha subunit [Roseovarius sp. 217] Length = 294 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 140/302 (46%), Positives = 196/302 (64%), Gaps = 13/302 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I++DKN++VLV GLTG+ G+FHT Q ++ T VVGG+ P KG T G +PVF Sbjct: 2 MAIIIDKNSRVLVTGLTGRIGSFHT-QDMINHGTNVVGGVTPGKGGTKHNG----LPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A T A+ + +VPP A D+I+E+ +A I VCI +GIP DM++VK + + Sbjct: 57 TVKGAVAETGADLVICFVPPPFAADSIMEAADAGITTCVCIADGIPASDMIKVKRYMRRY 116 Query: 121 S----SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 RLIGPNC GI+TP G+MP I++ G VGI+ RSGTL YEA Q + G+G Sbjct: 117 KAEKRMRLIGPNCAGIITPGQAFAGLMPPHIYKPGRVGIIGRSGTLGYEAASQMKERGIG 176 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+LELF DE T+++VMVGEIGG E EAA +++D Sbjct: 177 VSTSVGIGGDPINGSSFRDILELFENDEGTDAVVMVGEIGGPQEAEAAAYIRDHM----T 232 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+ ++AG +AP GR MGHAGA++S A++K+ + EAG+ I P+P+ G + + Sbjct: 233 KPVAAYIAGLSAPKGRRMGHAGAIVSAFGESAQEKVEILSEAGVTIVPTPSSFGDVVERM 292 Query: 297 LG 298 + Sbjct: 293 VA 294 >gi|15669431|ref|NP_248241.1| succinyl-CoA synthetase subunit alpha [Methanocaldococcus jannaschii DSM 2661] gi|2500925|sp|Q58643|SUCD_METJA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|158431279|pdb|2YV1|A Chain A, Crystal Structure Of Succinyl-Coa Synthetase Alpha Chain From Methanocaldococcus Jannaschii Dsm 2661 gi|1591879|gb|AAB99250.1| succinyl-CoA synthetase, alpha subunit (sucD) [Methanocaldococcus jannaschii DSM 2661] Length = 294 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 150/297 (50%), Positives = 206/297 (69%), Gaps = 10/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NTK +VQG+TG+ G+FHT++ +L C T++VGG+ P KG G VPVF TV Sbjct: 8 ILLDENTKAIVQGITGRQGSFHTKK-MLECGTKIVGGVTPGKGGQNVHG----VPVFDTV 62 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA + T ANASVI+VP A DA+ E+I+A I LIV ITE IPV D + E Sbjct: 63 KEAVKETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGV 122 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++IGPN PGI +P K+GI+P + ++GSVG++SRSGTLTYE Q + G G ST VG Sbjct: 123 KIIGPNTPGIASPKVGKLGIIPMEVLKEGSVGMVSRSGTLTYEIAHQIKKAGFGVSTCVG 182 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP+ G + +VL+LF D+ TE+IVM+GEIGG AEEEAA+F++ KKP++G+ Sbjct: 183 IGGDPIVGLRYKEVLDLFEKDDETEAIVMIGEIGGGAEEEAAKFIE-----KMKKPVIGY 237 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 +AG++AP G+ MGHAGA++ GKG AE K+ A++EAG +A + + I + L +LG Sbjct: 238 IAGQSAPEGKRMGHAGAIVEKGKGTAESKMKALEEAGAYVAKNISDIPKLLAGILGK 294 >gi|269955536|ref|YP_003325325.1| succinyl-CoA synthetase subunit alpha [Xylanimonas cellulosilytica DSM 15894] gi|269304217|gb|ACZ29767.1| succinyl-CoA synthetase, alpha subunit [Xylanimonas cellulosilytica DSM 15894] Length = 298 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 146/305 (47%), Positives = 202/305 (66%), Gaps = 12/305 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTY-----WTGGNVN 55 MSI ++K++K++VQG+TG G HT +L Q+VGG++ +K T G +V Sbjct: 1 MSIYLNKDSKIIVQGITGGMGAKHTA-LMLDSGAQIVGGVNARKAGTTVTHKNHEGDDVT 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV EA T AN SV++VPP+ DA IE+++A +PLIV ITEG+PV D V A Sbjct: 60 LPVFGTVKEAMAETGANVSVLFVPPAFTKDAAIEAVDAGMPLIVVITEGVPVQDTAEVWA 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 L+ +R+IGPNCPGI+TP GI P +I KG VG++S+SGTLTY+ +++ L Sbjct: 120 YLQGKQTRMIGPNCPGIITPGESLAGITPHTITGKGPVGLVSKSGTLTYQMMYELRD--L 177 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G STA+GIGGDPV GT ID LE F D T++IVM+GEIGG AEE AA ++K+ Sbjct: 178 GFSTAIGIGGDPVVGTTHIDALEAFENDPETQAIVMIGEIGGDAEERAAAYIKEHV---- 233 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ G+ + +P+ L E Sbjct: 234 TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAVGVRVGKTPSETASLLRE 293 Query: 296 LLGSL 300 +L ++ Sbjct: 294 VLAAV 298 >gi|296135286|ref|YP_003642528.1| succinyl-CoA synthetase, alpha subunit [Thiomonas intermedia K12] gi|295795408|gb|ADG30198.1| succinyl-CoA synthetase, alpha subunit [Thiomonas intermedia K12] Length = 298 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 153/305 (50%), Positives = 211/305 (69%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 M+IL+++ TKV+ QG+TGK G FHT Y V G++PKK + G +P+ Sbjct: 1 MAILINQGTKVITQGITGKTGQFHTRMCRDYANGKNCFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TVA+A+ T A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM+ V+ R++ Sbjct: 57 YGTVADARAATGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVKDMLLVRNRMK 116 Query: 119 ------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TPD KIGIMPG I RKG +GI+SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGIVSRSGTLTYEAVAQVTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + ID++ F D T++++M+GEIGGS E EAA++ K Sbjct: 177 LGLGQSSAVGIGGDPINGLKHIDIMRAFNDDPDTDAVIMIGEIGGSDEAEAARWCKAHM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKP+VGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G + +P+ +G+ Sbjct: 236 ---KKPVVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFTVTRNPSEMGKL 292 Query: 293 LVELL 297 L ++L Sbjct: 293 LKQVL 297 >gi|163788965|ref|ZP_02183409.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [Flavobacteriales bacterium ALC-1] gi|159875629|gb|EDP69689.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [Flavobacteriales bacterium ALC-1] Length = 290 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 151/298 (50%), Positives = 208/298 (69%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+ ++VQG TG GTFH Q I Y T VVGG+ P KG ++ PVF Sbjct: 1 MSVLVNKNSNIIVQGFTGSEGTFHAGQMIEY-GTNVVGGVTPGKGGQTH----LDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA E+ A+ ++I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DM++ ++ Sbjct: 56 TVSEAVEKVNADTTIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMIKAADYIKDR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP K+GIMPG +F+ G VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLVGPNCPGVITPGEAKVGIMPGFVFKSGRVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE++VM+GEIGG E +AA + K+ G KKP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLINDPETEAVVMIGEIGGQLEADAANWYKE---SGSKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G A+ K M+ GI + SPA IG+ + E+LG Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSDDTAQAKKKIMRACGIHVVDSPAEIGKKVAEVLG 290 >gi|332520441|ref|ZP_08396903.1| succinyl-CoA synthetase, alpha subunit [Lacinutrix algicola 5H-3-7-4] gi|332043794|gb|EGI79989.1| succinyl-CoA synthetase, alpha subunit [Lacinutrix algicola 5H-3-7-4] Length = 290 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 153/298 (51%), Positives = 210/298 (70%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIEY-GTNVVGGVTPGKGGQTHLDK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+ A+ ++I+VPP+ A DAI+E+ +A I +I+CITEGIPV DM++ ++ Sbjct: 56 TVTEAVEKVGADTTIIFVPPAFAADAIMEAADAGIKVIICITEGIPVADMIKASDYIKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP K+GIMPG +F++G VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLVGPNCPGVITPGEAKVGIMPGFVFKQGKVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D+ATE +VM+GEIGG E +AA + K+ G KKPI+ Sbjct: 176 IGIGGDPIIGTTTKEAVELLINDDATECVVMIGEIGGQLEADAANWYKN---SGSKKPII 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G A+ K M++ GI + SPA IG+ + E+LG Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSDDTAQAKKAIMRDCGIHVVDSPAEIGKKVAEVLG 290 >gi|222053862|ref|YP_002536224.1| succinyl-CoA synthetase, alpha subunit [Geobacter sp. FRC-32] gi|221563151|gb|ACM19123.1| succinyl-CoA synthetase, alpha subunit [Geobacter sp. FRC-32] Length = 298 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 164/298 (55%), Positives = 221/298 (74%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K++K+LVQG+TG++G FHT+Q Y +++V G+ P KG + G +PVF Sbjct: 1 MSILLNKDSKILVQGITGRSGLFHTQQCRDY-GSRIVAGVTPGKGGIHIEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T AN S+I+VPP A DAI+E+ +A + L VCITEGIPV DMV + LE Sbjct: 56 TVEEAVHYTQANVSMIFVPPPAAADAILEAADAGMDLAVCITEGIPVRDMVLARRVLESK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TPD CK+GIMPG I +KG +G++SRSGTLTYEAV Q + GLGQST Sbjct: 116 KMRLVGPNCPGVITPDECKVGIMPGHIHKKGKIGVVSRSGTLTYEAVKQLTDVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G +FIDVL+LF D AT+ + M+GEIGG AEEEAA+++K+ KKP+ Sbjct: 176 VGIGGDPIIGMKFIDVLQLFNEDPATDGVFMIGEIGGGAEEEAAEWIKENM----KKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 F+AG TAPPG+ MGHAGA+I+GGKG AEDKI ++E G+ ++ SP ++G ++ ++G Sbjct: 232 AFIAGITAPPGKRMGHAGAIITGGKGRAEDKIQVLRECGVTVSTSPTQMGETMQAVMG 289 >gi|289596662|ref|YP_003483358.1| succinyl-CoA synthetase, alpha subunit [Aciduliprofundum boonei T469] gi|289534449|gb|ADD08796.1| succinyl-CoA synthetase, alpha subunit [Aciduliprofundum boonei T469] Length = 288 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 134/298 (44%), Positives = 190/298 (63%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+++D+NTK++VQG+TG G+FH+ + I + +VV G+ P KG NVPV+ Sbjct: 1 MSVIIDENTKIIVQGITGHQGSFHSGEMIKF-GAKVVAGVTPGKGGMKVH----NVPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV E A++I VP DA E++ I ++ +TE +P+ D + + Sbjct: 56 TVEETL-VHEPEATMITVPAPFVKDAAFEAMYNGIRVVYILTEKVPLHDALDIVTYARSH 114 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPN PGI P K+GIMP IF+KG+V + SRSGTLTYE V + G GQST Sbjct: 115 GHMVIGPNGPGITVPGKTKMGIMPNHIFKKGTVAVASRSGTLTYEIVNALTLNGYGQSTV 174 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGD + G F+D+LELF DE TE+IV+VGEIGG+AEEEAA+++K KP+V Sbjct: 175 IGLGGDRITGLNFVDILELFEKDEDTEAIVLVGEIGGTAEEEAAEYIKKNVS----KPVV 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG++APPG+ MGHAGA+I+ GKG AE KI A EAG+ +A P I ++L ++ Sbjct: 231 AYIAGRSAPPGKRMGHAGAIITRGKGTAESKIKAFNEAGVPVAEFPWEIPQALKKVYK 288 >gi|184201463|ref|YP_001855670.1| succinyl-CoA synthetase subunit alpha [Kocuria rhizophila DC2201] gi|183581693|dbj|BAG30164.1| succinyl-CoA synthetase alpha chain [Kocuria rhizophila DC2201] Length = 305 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 148/309 (47%), Positives = 209/309 (67%), Gaps = 19/309 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++K++KV+VQG+TG GT HT + +L TQV+GG++ +K T G V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHTAR-MLAAGTQVMGGVNARKAGTTVSHQDKDGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PV+ +V+EA + T ANAS+++VPP+ DA+IE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVYGSVSEAMKETGANASIVFVPPAFCKDAVIEAIDAEIPLVVVITEGIPVQDSAEFWA 119 Query: 116 RLE-------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + K +R+IGPNCPGI++P+ +GI P +I KG +G++S+SGTLTY+ ++ Sbjct: 120 HSQANTGADGKPKTRIIGPNCPGIISPEESLLGITPANITGKGKLGLVSKSGTLTYQMMY 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + LG +TA+GIGGDPV GT ID LE F AD TE+IVM+GEIGG AEE AA F+K Sbjct: 180 ELRD--LGFTTAIGIGGDPVIGTTHIDALEAFEADPETEAIVMIGEIGGDAEERAADFIK 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 238 ANV----TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSE 293 Query: 289 IGRSLVELL 297 + + E+ Sbjct: 294 TAQLMREIF 302 >gi|285017466|ref|YP_003375177.1| succinyl-CoA synthetase, NAD(P)-binding, alpha subunit protein [Xanthomonas albilineans GPE PC73] gi|283472684|emb|CBA15189.1| probable succinyl-coa synthetase, nad(p)-binding, alpha subunit protein [Xanthomonas albilineans] Length = 290 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 171/297 (57%), Positives = 212/297 (71%), Gaps = 10/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K TKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG + G +PVF Sbjct: 1 MSVLINKKTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGSTHIG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L++ Sbjct: 56 TVREAVQATGADASVIYVPPPFAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLKQH 115 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 L+GPNCPGI+TP CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 PDVVLVGPNCPGIITPGECKIGIMPGHIHQKGKIGIVSRSGTLTYEAVKQTTAAGLGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G F+D L+LF D TE I+MVGEIGG+AEE A ++K KKP+ Sbjct: 176 VIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGAAEEAGAAYIKQHV----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 VGF+AG +AP G+ MGHAGA+ SGG G AE K AM+ AG+ SP +G ++ L Sbjct: 232 VGFIAGASAPKGKRMGHAGAIASGGSGTAEGKFAAMEAAGVKTVRSPGDLGAAIASL 288 >gi|146300647|ref|YP_001195238.1| succinyl-CoA synthetase, alpha subunit [Flavobacterium johnsoniae UW101] gi|146155065|gb|ABQ05919.1| succinyl-CoA synthetase, alpha subunit [Flavobacterium johnsoniae UW101] Length = 290 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 153/298 (51%), Positives = 217/298 (72%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG T +++ PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHASQMIEY-GTNVVGGVTPGKGGT----SHLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ++ A+ S+I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DM++ +++ Sbjct: 56 TVKDAVDQAGADTSIIFVPPAFAADAIMEAADAGIKVIIAITEGIPVADMIKANNYVKER 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SSRLIGPNCPG++TP K+GIMPG +F+KG+VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 SSRLIGPNCPGVITPGEAKVGIMPGFVFKKGTVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE+I+M+GEIGG E +AA+++K + G +KP++ Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETEAIIMIGEIGGQLEADAAKWVKAD---GNRKPVI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G A K M++ GI + SPA IG+ + E+LG Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSDDTAAAKKQIMRDNGIHVVDSPAEIGKKVKEVLG 290 >gi|255931937|ref|XP_002557525.1| Pc12g06870 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582144|emb|CAP80314.1| Pc12g06870 [Penicillium chrysogenum Wisconsin 54-1255] Length = 329 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 169/294 (57%), Positives = 216/294 (73%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+T+VL QG TGK GTFH EQAI Y T VVGG +PKK T ++ PVF Sbjct: 34 NLKINKDTRVLFQGFTGKQGTFHAEQAIAY-GTNVVGGTNPKKAGTTH----LDRPVFAN 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V++A + T A AS I+VPP A I E+I AE+ L+VCITEGIP DMVR+ L+ ++ Sbjct: 89 VSDAVKETGATASAIFVPPPLAAAGIEEAIAAEMGLVVCITEGIPQHDMVRITDILKTQN 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 149 KTRLIGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D T+ I+M+GEIGGSAEE+AA+F K KP V Sbjct: 209 VGIGGDPFSGTNFIDCLKVFLEDPETDGIIMIGEIGGSAEEDAAEFFKANNI--HNKPAV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AG +APPGR MGHAGA++SGGKGGA+ KI+A+ +AG+ + SPA +G++L+ Sbjct: 267 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALTDAGVIVERSPASLGKTLL 320 >gi|145222456|ref|YP_001133134.1| succinyl-CoA synthetase subunit alpha [Mycobacterium gilvum PYR-GCK] gi|315442902|ref|YP_004075781.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Mycobacterium sp. Spyr1] gi|145214942|gb|ABP44346.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Mycobacterium gilvum PYR-GCK] gi|315261205|gb|ADT97946.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Mycobacterium sp. Spyr1] Length = 300 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 150/307 (48%), Positives = 207/307 (67%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++ ++KV+VQG+TG GT HT+ +L TQ+VGG++ +K T T G +VN Sbjct: 1 MSIFLNADSKVIVQGITGGEGTKHTK-LMLKAGTQIVGGVNARKAGTEVTHQDKDGKDVN 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA + T A+ S+ +VPP+ + DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMKETGADVSIAFVPPAFSKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 YNVEKGEKTRIIGPNCPGIITPGESLVGITPNNITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE+AA ++K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKLIVMIGEIGGDAEEKAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++S G G A K A++ AG+ + +P+ Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSDGAGTAAGKQEALEAAGVKVGKTPSETAAKA 293 Query: 294 VELLGSL 300 ELL +L Sbjct: 294 RELLQNL 300 >gi|159906082|ref|YP_001549744.1| succinyl-CoA synthetase subunit alpha [Methanococcus maripaludis C6] gi|159887575|gb|ABX02512.1| succinyl-CoA synthetase, alpha subunit [Methanococcus maripaludis C6] Length = 287 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 132/295 (44%), Positives = 193/295 (65%), Gaps = 9/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NT+ +VQG+TG G FHT+ ++ C T +V G+ P K G VPV+ TV Sbjct: 2 ILLDENTRAIVQGITGNQGRFHTK-NMIECNTNIVAGVTPGKAGQDVYG----VPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E E+ ANAS+I++P DA E+I+A + L+ ITE IP+ D + + A +K Sbjct: 57 LETVEKYDANASLIFIPAPFVKDAAYEAIDAGVDLVTIITEHIPIQDSMDIVAYGKKHGV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PG+ +P K+GI+P SI ++G++G++SRSGTLTYE Q + GQST VG Sbjct: 117 NIIGPNTPGLASPKVGKLGIIPMSILKEGNIGMVSRSGTLTYEIASQLTSSNYGQSTCVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV G +I+VLE+F D T+++VMVGEIGG+AEE+AA+ + KKP++ + Sbjct: 177 IGGDPVTGLRYIEVLEMFEKDTETDAVVMVGEIGGNAEEDAAEKM----ISKMKKPVISY 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG++AP G+ MGHAGA+I G G A+ K+ A++ AG +A + I L E++ Sbjct: 233 IAGQSAPEGKRMGHAGAIIEKGVGTAKSKMEALENAGAHVAKRISDIPLLLKEII 287 >gi|134045819|ref|YP_001097305.1| succinyl-CoA synthetase subunit alpha [Methanococcus maripaludis C5] gi|132663444|gb|ABO35090.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methanococcus maripaludis C5] Length = 287 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 131/295 (44%), Positives = 193/295 (65%), Gaps = 9/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NT+ +VQG+TG G FHT+ +L C T VV G+ P K G VPV+ TV Sbjct: 2 ILLDENTRAIVQGITGNQGRFHTK-NMLECNTNVVAGVTPGKAGQDVYG----VPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E E+ ANAS+I++P DA E+++A + L+ ITE IP+ D + + A +K Sbjct: 57 LETVEKYDANASLIFIPAPFVKDAAYEAVDAGLDLVTIITEHIPIQDSMDIVAYGKKHGV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PG+ +P K+GI+P SI ++G++G++SRSGTLTYE Q + GQS+ VG Sbjct: 117 NIIGPNTPGLASPKVGKLGIIPVSILKEGNIGMVSRSGTLTYEIASQLTTSNYGQSSCVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP+ G +I+VLE+F D T+++VMVGEIGG+AEE+AA+ + KKP++ + Sbjct: 177 IGGDPITGLRYIEVLEMFEKDSETDAVVMVGEIGGNAEEDAAEKM----ISKMKKPVISY 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG++AP G+ MGHAGA+I G G A+ K+ A++ AG +A + I L E++ Sbjct: 233 IAGQSAPEGKRMGHAGAIIEKGVGTAKSKMEALENAGAHVAKRISDIPLLLKEII 287 >gi|120613314|ref|YP_972992.1| succinyl-CoA synthetase subunit alpha [Acidovorax citrulli AAC00-1] gi|326319397|ref|YP_004237069.1| succinyl-CoA synthetase subunit alpha [Acidovorax avenae subsp. avenae ATCC 19860] gi|120591778|gb|ABM35218.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Acidovorax citrulli AAC00-1] gi|323376233|gb|ADX48502.1| succinyl-CoA synthetase, alpha subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 298 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 153/306 (50%), Positives = 207/306 (67%), Gaps = 16/306 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+TKV+ QG+TGK G FHTE+ Y V G++PKK N+P+ Sbjct: 1 MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGESI----FNIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 + +V EA ++T A SVIYVPP+GA AI E++EA++ + +CITEGIPV DM ++ Sbjct: 57 YGSVKEAAQQTGATVSVIYVPPAGAAAAIWEAVEADLDMAICITEGIPVRDMLEVRNKMK 116 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV ++ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAMLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAAQ+ K Sbjct: 177 VGLGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAAQWCKANM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAPPG+ MGHAGA+ISGG A+ K+ M+E G + +P+ +G+ Sbjct: 236 ---KKPIVGFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFVVTRNPSELGKL 292 Query: 293 LVELLG 298 L L Sbjct: 293 LKAQLK 298 >gi|170744592|ref|YP_001773247.1| succinyl-CoA synthetase subunit alpha [Methylobacterium sp. 4-46] gi|168198866|gb|ACA20813.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium sp. 4-46] Length = 299 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 146/302 (48%), Positives = 198/302 (65%), Gaps = 13/302 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T +L+QG+TG G+FH ++ I Y + VVGG+ P KG G +PVF Sbjct: 1 MSILIDEKTPILIQGITGDKGSFHAKEMIEY-GSNVVGGVTPGKGGRSHLG----IPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +T A S+ +V P A DAI+E+ +A I LI IT+GIP DM+RVK L++ Sbjct: 56 TVKEAVRQTGATTSITFVAPPFAADAIMEAADAGIRLICSITDGIPAQDMMRVKRYLKRY 115 Query: 121 ----SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S ++GPNC GI++P +GIMPG I+ KG+VG++SRSGTL YEA Q GLG Sbjct: 116 PKERRSMVVGPNCAGIISPGKSMLGIMPGHIYLKGNVGVISRSGTLGYEAASQMKAVGLG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L LF D T++++M+GEIGG E EAA ++KD Sbjct: 176 ISTSVGIGGDPINGSSFLDHLALFEEDPETDAVLMIGEIGGPQEAEAAAWIKDNMS---- 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGFVAG TAP GR MGHAGA+IS A +K M+ G+ +APSP G ++ ++ Sbjct: 232 KPVVGFVAGLTAPKGRRMGHAGAIISAVGDSAAEKAEIMRSYGLTVAPSPGEFGSTMAKV 291 Query: 297 LG 298 + Sbjct: 292 ME 293 >gi|325855034|ref|ZP_08171750.1| succinate-CoA ligase, alpha subunit [Prevotella denticola CRIS 18C-A] gi|327313354|ref|YP_004328791.1| succinate-CoA ligase subunit alpha [Prevotella denticola F0289] gi|325484012|gb|EGC86952.1| succinate-CoA ligase, alpha subunit [Prevotella denticola CRIS 18C-A] gi|326945449|gb|AEA21334.1| succinate-CoA ligase, alpha subunit [Prevotella denticola F0289] Length = 290 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 144/299 (48%), Positives = 198/299 (66%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TK++VQG+TG+ G+FH + Y T VVGG P K +G +PVF Sbjct: 1 MSILINKDTKLIVQGITGRDGSFHASKMKEY-GTNVVGGTSPGKAGQEVSG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T AN S+I+VP A DA++E+I+ I L++CITEG+P LD V + Sbjct: 56 TVKDAVAATGANTSIIFVPAPFAKDAMLEAIDGGIELVICITEGVPTLDAVAAQRYARIK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPG+++P+ GIMP +IF+KG G++SRSGTLTYE V+ +Q GLGQSTA Sbjct: 116 GVKVIGPNCPGLISPEESMAGIMPTNIFKKGHTGVISRSGTLTYEVVYNLTQAGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDPV G F D+L +F D T+SI ++GEIGG AEE AA+F+K+ KP+ Sbjct: 176 VGVGGDPVVGLYFEDLLRMFQDDPETDSIALIGEIGGDAEERAARFIKEHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F++G+ APPG+ MGHAGA+IS G G A +KI A + G+ +A + I L LG Sbjct: 232 VFISGQQAPPGKQMGHAGAIISSGSGSASEKIAAFEAVGVPVARETSEIPELLKRQLGK 290 >gi|213404008|ref|XP_002172776.1| succinyl-CoA ligase subunit alpha [Schizosaccharomyces japonicus yFS275] gi|212000823|gb|EEB06483.1| succinyl-CoA ligase subunit alpha [Schizosaccharomyces japonicus yFS275] Length = 315 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 172/300 (57%), Positives = 219/300 (73%), Gaps = 7/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++++ +TKVL QG TGK GTFH +QAI Y TQVVGG +PKK T G PVF Sbjct: 20 NLMISSSTKVLFQGFTGKQGTFHAQQAIDY-GTQVVGGTNPKKAGTTHLGR----PVFAD 74 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 +AEA + T A+AS I+VPP+ A AI E+IEAE+PL+V ITEGIP DM+R+ L+ +S Sbjct: 75 IAEAMKETKADASAIFVPPAFAAGAIAEAIEAEVPLVVAITEGIPQHDMLRISDMLKTQS 134 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMP I G +GI+SRSGTLTYEAV QT+Q LGQS Sbjct: 135 KTRLVGPNCPGVIRPGQCKIGIMPSHIHMPGRIGIISRSGTLTYEAVNQTTQTKLGQSLV 194 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKPI 239 +GIGGDP GT FID LELFL D T+ ++M+GEIGGSAEEEAA++LK+ R + KP+ Sbjct: 195 IGIGGDPFPGTNFIDGLELFLNDPNTDGVIMIGEIGGSAEEEAAEYLKNHNLTREKPKPV 254 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V F+AG TAPPGR MGHAGA+++GGKGGA DK+ A++ AG+ A SPA +G+ + E L Sbjct: 255 VSFIAGVTAPPGRRMGHAGAIVAGGKGGAMDKLLALEAAGVRTARSPAILGKLICEELAK 314 >gi|195130923|ref|XP_002009900.1| GI14987 [Drosophila mojavensis] gi|193908350|gb|EDW07217.1| GI14987 [Drosophila mojavensis] Length = 337 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 164/297 (55%), Positives = 209/297 (70%), Gaps = 6/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K TK+LVQG TGK TFH E+A Y T +VGG PKKG T +++PVF Sbjct: 36 NLKINKETKLLVQGFTGKQATFHAEEAQKY-GTTIVGGTSPKKGGTTH----MDLPVFKN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + +A+VI++PPS A I +IE E+ LIV ITEGIP +DMVR+ L + Sbjct: 91 VKEAVKAVKPDATVIFIPPSTAAIGICAAIENEVGLIVAITEGIPQVDMVRILQMLHSQE 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++P+ CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+ GLGQ+ Sbjct: 151 KSRLLGPNCPGIISPEQCKIGIMPGHIHKRGCVGIVSRSGTLTYEAVHQTTNVGLGQTLC 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGDP GT FID L +FL D+ T+ I+++GEIGGSAEEEAA FLK KP+V Sbjct: 211 IGVGGDPFNGTNFIDALNIFLYDKETKGIILIGEIGGSAEEEAADFLKANNSGCDAKPVV 270 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG TAPPGR MGHAGA+ISGGKG A DK+ A+K AG IA +P +G L + Sbjct: 271 AFIAGVTAPPGRRMGHAGAIISGGKGAASDKLKALKAAGALIALNPNHLGTILHSEM 327 >gi|156052230|ref|XP_001592076.1| hypothetical protein SS1G_07524 [Sclerotinia sclerotiorum 1980] gi|154705300|gb|EDO05039.1| hypothetical protein SS1G_07524 [Sclerotinia sclerotiorum 1980 UF-70] Length = 329 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 169/300 (56%), Positives = 219/300 (73%), Gaps = 8/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + K+T+V+ QG TGK GTFH +QAI Y T VVGG +PKK +++PVF+ Sbjct: 34 NLRITKDTRVIYQGFTGKQGTFHAQQAIEY-GTTVVGGTNPKKAGQTH----LDLPVFSN 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + A AS I+VPP A I E+I AEIPL+VCITEGIP DMVR+ L+ + Sbjct: 89 VEQAVKEAGATASAIFVPPPLAAAGIEEAIAAEIPLVVCITEGIPQHDMVRITDILKTQG 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 149 KTRLVGPNCPGLIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLKD KKP+V Sbjct: 209 VGIGGDPFSGTNFIDCLKVFLEDEETDGIIMIGEIGGSAEEDAAEFLKDYNTS--KKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L L Sbjct: 267 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALEAAGVIVERSPALLGKTLHAEFMRL 326 >gi|154174472|ref|YP_001408276.1| succinate-CoA ligase subunit alpha [Campylobacter curvus 525.92] gi|112802748|gb|EAU00092.1| succinate-CoA ligase, alpha subunit subfamily [Campylobacter curvus 525.92] Length = 290 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 146/300 (48%), Positives = 203/300 (67%), Gaps = 12/300 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNT+V+VQG+TGK G+FHT+ + Y TQ+ G+ P KG G V ++ Sbjct: 1 MSILIDKNTRVIVQGITGKEGSFHTQSCMDY-GTQIAAGVTPFKGGQTHLG----VKIYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAK+ + A+AS+I+VP DAIIE+ +A I L V ITE +PVLDM+ KA K Sbjct: 56 TVKEAKDASGADASMIFVPAGFCKDAIIEAADAGIKLCVVITEHVPVLDMLAAKAYANKR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS--VGILSRSGTLTYEAVFQTSQEGLGQS 178 ++IGPNCPG+++ + CK+GIMP ++F++ S +GI+S+SGTLTYEA Q ++G G S Sbjct: 116 GMKIIGPNCPGVISANECKLGIMPSAVFKRASLNIGIISKSGTLTYEAANQICEQGYGIS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGD V G + ++L LF DE T+++VM+GEIGG E A+Q ++ KKP Sbjct: 176 TAIGIGGDAVIGMAYDEILPLFDEDEDTKAVVMIGEIGGELESRASQIIE-----NFKKP 230 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 IV F+AG +AP GR MGHAGA+I+ A+ K ++ AG I +PA+IG L E+LG Sbjct: 231 IVAFIAGASAPEGRKMGHAGAIINSKNASAKAKFEVLRAAGAHIVTNPAKIGEKLKEILG 290 >gi|295396403|ref|ZP_06806565.1| succinyl-CoA synthetase subunit alpha [Brevibacterium mcbrellneri ATCC 49030] gi|294970705|gb|EFG46618.1| succinyl-CoA synthetase subunit alpha [Brevibacterium mcbrellneri ATCC 49030] Length = 299 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 141/306 (46%), Positives = 205/306 (66%), Gaps = 14/306 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++ +KV+VQG+TG GT HT + +L T+VVGG++ +K T G +V Sbjct: 1 MSIFLNSESKVIVQGITGGEGTKHTAR-MLAAGTKVVGGVNARKAGTKVSHKDKDGNDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +V EA + T A+ SV +VPP+ + DA E+I+A I L+V ITEGIPV D + A Sbjct: 60 LPVFASVEEAMKETGADVSVAFVPPAFSKDAAFEAIDAGIGLLVIITEGIPVQDSAEIWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + + +R+IGPNCPGI++P+ GI+P +I ++G +G++S+SGTLTY+ +++ Sbjct: 120 HATAKGNKTRIIGPNCPGIISPEQSLAGIIPANITKRGKIGLVSKSGTLTYQLMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G ST +GIGGDPV GT ID + F D TE+IVM+GEIGG AEE AA+F+K+ Sbjct: 179 -IGFSTCIGIGGDPVIGTTHIDAIAAFQEDPDTEAIVMIGEIGGDAEERAAEFIKENV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G AE K A++ AG+ + +P+ + Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAEAKKKALEAAGVKVGKTPSETANLM 293 Query: 294 VELLGS 299 E+LG+ Sbjct: 294 REILGA 299 >gi|50290257|ref|XP_447560.1| hypothetical protein [Candida glabrata CBS 138] gi|49526870|emb|CAG60497.1| unnamed protein product [Candida glabrata] Length = 319 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 149/304 (49%), Positives = 200/304 (65%), Gaps = 10/304 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ K+TKV+ QG TGK GTFH + + Y T VVGG +PKK G PVF + Sbjct: 21 NLLLPKDTKVMFQGFTGKQGTFHAKISQEY-GTNVVGGTNPKKAGQTHLGQ----PVFAS 75 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V + + T A S I+VPP AG AI E+IEAEIPL VCITEGIP D++ + L+ ++ Sbjct: 76 VKDCVKETGATVSGIFVPPPIAGAAIQEAIEAEIPLAVCITEGIPQHDLLYISEMLKSQN 135 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPG++ P + ++GI P IF+ G +GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 136 KTRLVGPNCPGVINPANHVRVGIQPTRIFKPGKIGIVSRSGTLTYEAVQQTTLSGLGQSL 195 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKP 238 VGIGGD GT+FIDVL+LFL D TE I+M+GEIGG E EAA+FL++ + KP Sbjct: 196 VVGIGGDAFPGTDFIDVLKLFLEDPQTEGIIMLGEIGGKPEIEAAEFLQEYNFSKANPKP 255 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AGK A G MGH+GA++ G AE K A++ G+ + SP +G++L+E Sbjct: 256 VASFIAGKVAGQMKGVRMGHSGAIVEGSGTDAESKKEALRNVGVQVVESPGYLGQTLLEQ 315 Query: 297 LGSL 300 L Sbjct: 316 FSKL 319 >gi|308176363|ref|YP_003915769.1| succinyl-CoA synthetase subunit alpha [Arthrobacter arilaitensis Re117] gi|307743826|emb|CBT74798.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Arthrobacter arilaitensis Re117] Length = 300 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 144/307 (46%), Positives = 202/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K++KV+VQG+TG GT HT +L T +VGG++ +K T T G ++ V+ Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHTA-LMLKAGTNIVGGVNARKAGTTVTHGEQDIKVYG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 TVAEAK T A+ S+++VPP DA++E+IEAE+ L+V ITEG+PV D A + Sbjct: 60 TVAEAKAETGADVSIVFVPPKFTKDAVVEAIEAEVGLVVVITEGVPVQDSAEFWALAQSK 119 Query: 119 -----KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 VDADGNQITRIIGPNCPGIITPGEALVGITPNNITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID L F AD T++IVM+GEIGG AEE AA ++K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDALAAFEADPETKAIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ L Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAVLL 293 Query: 294 VELLGSL 300 E+ +L Sbjct: 294 REVFAAL 300 >gi|70998594|ref|XP_754019.1| succinyl-CoA synthetase alpha subunit [Aspergillus fumigatus Af293] gi|66851655|gb|EAL91981.1| succinyl-CoA synthetase alpha subunit, putative [Aspergillus fumigatus Af293] gi|159126247|gb|EDP51363.1| succinyl-CoA synthetase alpha subunit, putative [Aspergillus fumigatus A1163] Length = 331 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 171/294 (58%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH EQAI Y T+VVGG +PKK T ++ PVF Sbjct: 36 NLRINADTKVIFQGFTGKQGTFHAEQAIAY-GTKVVGGTNPKKAGTMH----LDRPVFAN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V+EA + T A AS I+VPP A I E+I AE+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 91 VSEAVKETGATASAIFVPPPLAAAGIEEAIAAEVPLVVCITEGIPQHDMVRITDILKTQN 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+++GEIGGSAEE+AA+F K K KP V Sbjct: 211 VGIGGDPFSGTNFIDCLKIFLEDEETDGIILIGEIGGSAEEDAAEFFKANNK--HNKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L+ Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALESAGVTVERSPAHLGKTLL 322 >gi|289192171|ref|YP_003458112.1| succinyl-CoA synthetase, alpha subunit [Methanocaldococcus sp. FS406-22] gi|288938621|gb|ADC69376.1| succinyl-CoA synthetase, alpha subunit [Methanocaldococcus sp. FS406-22] Length = 288 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 150/297 (50%), Positives = 205/297 (69%), Gaps = 10/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+ ++TK +VQG+TGK G+FHT++ +L C T++VGG+ P KG G VPVF TV Sbjct: 2 ILLTEDTKAIVQGITGKQGSFHTKK-MLDCGTKIVGGVTPGKGGKEVYG----VPVFDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA E T ANASVI+VP A DA+ E+I+A I LIV ITE IPV D + E Sbjct: 57 KEAVEETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++IGPN PGI +P K+GI+P + ++GSVG++SRSGTLTYE Q + G G ST VG Sbjct: 117 KIIGPNTPGIASPKVGKLGIIPMEVLQEGSVGMVSRSGTLTYEIAHQIKKAGFGVSTCVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP+ G + +VL+LF D+ TE+IVM+GEIGG AEEEA++F+K KKP++G+ Sbjct: 177 IGGDPIVGLRYKEVLDLFEKDDETEAIVMIGEIGGGAEEEASKFIK-----KMKKPVIGY 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 +AG++AP G+ MGHAGA++ GKG AE K+ A++EAG +A + + I + L E+L Sbjct: 232 IAGQSAPEGKRMGHAGAIVEKGKGTAESKMKALEEAGAYVAKNISDIPKLLTEILKK 288 >gi|186524998|ref|NP_001119263.1| succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative [Arabidopsis thaliana] gi|332005759|gb|AED93142.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-2 [Arabidopsis thaliana] Length = 297 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 165/259 (63%), Positives = 193/259 (74%), Gaps = 9/259 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++V G+ PKKG T G +PVF T Sbjct: 46 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVAGVTPKKGGTEHLG----LPVFNT 100 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEAK T ANASVIYVP A AI+E + AE+ LIVCITEGIP DMVRVKA L +S Sbjct: 101 VAEAKAETKANASVIYVPAPFAAAAIMEGLAAELDLIVCITEGIPQHDMVRVKAALNSQS 160 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMPG I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 161 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTC 220 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D LE F D TE IV++GEIGG+AEE+AA +K+ G KP+V Sbjct: 221 VGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIKEN---GTDKPVV 277 Query: 241 GFVAGKTAPPGRTMGHAGA 259 F+AG TAPPGR MGHAG Sbjct: 278 AFIAGLTAPPGRRMGHAGG 296 >gi|154312746|ref|XP_001555700.1| hypothetical protein BC1G_05074 [Botryotinia fuckeliana B05.10] gi|150849776|gb|EDN24969.1| hypothetical protein BC1G_05074 [Botryotinia fuckeliana B05.10] Length = 329 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 170/300 (56%), Positives = 219/300 (73%), Gaps = 8/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + K+T+V+ QG TGK GTFH +QAI Y T VVGG +PKK +++PVF T Sbjct: 34 NLRITKDTRVIYQGFTGKQGTFHAQQAIEY-GTTVVGGTNPKKAGQTH----LDLPVFAT 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + A AS I+VPP A I E+I AEIPL+VCITEGIP DMVR+ L+ + Sbjct: 89 VEQAVKEAGATASAIFVPPPLAAAGIEEAIAAEIPLVVCITEGIPQHDMVRITDILKTQG 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 149 KTRLVGPNCPGLIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLV 208 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+FLKD KKP+V Sbjct: 209 VGIGGDPFSGTNFIDCLKVFLEDEETDGIIMIGEIGGSAEEDAAEFLKDYNTA--KKPVV 266 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG +APPGR MGHAGA++SGGKGGA+ KI+A++ AG+ + SPA +G++L L Sbjct: 267 SFIAGISAPPGRRMGHAGAIVSGGKGGADSKISALEAAGVIVERSPALLGKTLHAEFMRL 326 >gi|54026964|ref|YP_121206.1| succinyl-CoA synthetase subunit alpha [Nocardia farcinica IFM 10152] gi|54018472|dbj|BAD59842.1| putative succinyl-CoA synthetase alpha subunit [Nocardia farcinica IFM 10152] Length = 304 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 146/306 (47%), Positives = 202/306 (66%), Gaps = 14/306 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++K++KV+VQG+TG GT HT +L T++VGG++ +K T G V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHTA-LMLKAGTKIVGGVNARKAGTTVSHTDKDGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TVAEA + T A+ S+ +VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGTVAEAIKETGADVSIAFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + + +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 YNVEKGNKTRIIGPNCPGIITPGESLVGITPANITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G ST++GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTSIGIGGDPVIGTTHIDAIEAFEKDPETKLIVMIGEIGGDAEERAAAYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K +A++ AG+ + +P+ Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKDALEAAGVKVGKTPSETAALA 293 Query: 294 VELLGS 299 E+L Sbjct: 294 REILEK 299 >gi|227833886|ref|YP_002835593.1| succinyl-CoA synthetase alpha subunit [Corynebacterium aurimucosum ATCC 700975] gi|262184892|ref|ZP_06044313.1| succinyl-CoA synthetase subunit alpha [Corynebacterium aurimucosum ATCC 700975] gi|227454902|gb|ACP33655.1| succinyl-CoA synthetase alpha subunit [Corynebacterium aurimucosum ATCC 700975] Length = 292 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 131/299 (43%), Positives = 190/299 (63%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K+++++VQG+TG G HT + +L + +VGG++P+K +PVF Sbjct: 1 MSIFLNKDSRIIVQGMTGSEGMKHTRR-MLESGSNIVGGVNPRKAGERVDIDGREIPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA + T AN +VI+VP DA E+I A I L+V ITEGIPV D + A +S Sbjct: 60 SVREAMQATEANVTVIFVPAKFTKDAAEEAIRAGIELVVIITEGIPVKDTAELYALGRES 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +R+IGPNCPG+ TP GI+P G +G++S+SGTLTY+ +++ S +G ST Sbjct: 120 KTRIIGPNCPGLYTPGESNAGIIPAETAPNPGKIGLVSKSGTLTYQMMYELSD--IGFST 177 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDP+ GT I +E F D TE+I+M+GEIGG AEE AA ++KD KP+ Sbjct: 178 CVGIGGDPIIGTTHISAIEAFQNDPDTEAIIMIGEIGGDAEEHAAAYIKDHV----TKPV 233 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + ++AG TAP G+TMGHAGA++SGG G AE K A++ AG+ + +P++ + L Sbjct: 234 IAYIAGFTAPEGKTMGHAGAIVSGGSGTAEGKKAALEAAGVKVGKTPSQAAELVRAALA 292 >gi|297156121|gb|ADI05833.1| succinyl-CoA synthetase subunit alpha [Streptomyces bingchenggensis BCW-1] Length = 304 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 137/299 (45%), Positives = 192/299 (64%), Gaps = 7/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT + +L T +VGG++P+K VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGAEGMKHTRR-MLAAGTDIVGGVNPRKAGVQIDIDGRTVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA + T A+ +V++VPP A A+IE+ +AEIPL V ITEGIPV D V A Sbjct: 60 SVGEAVDATGADVTVLFVPPPFAKAAVIEAADAEIPLAVVITEGIPVHDAVAFHAYARAR 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++R+IGPNCPG+++P GI+P I + G +G++S+SGTLTY+ +++ +G S+ Sbjct: 120 ATRIIGPNCPGLISPGQSNAGIIPSDITKPGRIGLVSKSGTLTYQLMYELRD--IGFSSC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA+F+ + KP+V Sbjct: 178 VGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAARFIAERV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP GRTMGHAGA++SG G A K A++ AG+ + +P + LL Sbjct: 234 GYIAGFTAPEGRTMGHAGAIVSGSSGTARAKKEALEAAGVRVGATPTETAELVFALLAD 292 >gi|119498529|ref|XP_001266022.1| succinyl-CoA synthetase alpha subunit, putative [Neosartorya fischeri NRRL 181] gi|119414186|gb|EAW24125.1| succinyl-CoA synthetase alpha subunit, putative [Neosartorya fischeri NRRL 181] Length = 331 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 173/294 (58%), Positives = 219/294 (74%), Gaps = 8/294 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKVL QG TGK GTFH EQAI Y T+VVGG +PKK T ++ PVF Sbjct: 36 NLRINADTKVLFQGFTGKQGTFHAEQAIAY-GTKVVGGTNPKKAGTMH----LDRPVFAN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V+EA + T A AS I+VPP A I E+I AE+PL+VCITEGIP DMVR+ L+ ++ Sbjct: 91 VSEAVKETGATASAIFVPPPLAAAGIEEAIAAEVPLVVCITEGIPQHDMVRITDILKTQN 150 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 151 KTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 210 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA+F K K KP V Sbjct: 211 VGIGGDPFSGTNFIDCLKIFLEDEETDGIIMIGEIGGSAEEDAAEFFKANNK--HNKPAV 268 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 GF+AG +APPGR MGHAGA++SGGKGGA+ KI A++ AG+ + SPA +G++L+ Sbjct: 269 GFIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALESAGVTVERSPAHLGKTLL 322 >gi|220926858|ref|YP_002502160.1| succinyl-CoA synthetase subunit alpha [Methylobacterium nodulans ORS 2060] gi|219951465|gb|ACL61857.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium nodulans ORS 2060] Length = 297 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 146/303 (48%), Positives = 200/303 (66%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T +L+QG+TG G+FH ++ I Y + VVGG+ P KG G +PVF Sbjct: 1 MSILIDEKTPILIQGITGDKGSFHAKEMIEY-GSNVVGGVTPGKGGRSHLG----IPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ++T A AS+ +V P A DAI+E+ +A I LI IT+GIP DM+RVK L++ Sbjct: 56 TVKDAVKQTGATASITFVAPPFAADAIMEAADAGIRLICSITDGIPAQDMMRVKRYLKRY 115 Query: 121 ----SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S ++GPNC GI++P +GIMPG I+ KG+VG++SRSGTL YEA Q GLG Sbjct: 116 PKERRSMVVGPNCAGIISPGKSMLGIMPGHIYLKGNVGVISRSGTLGYEAASQMKAVGLG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L LF D T++++M+GEIGG E EAA ++K+ Sbjct: 176 ISTSVGIGGDPINGSSFLDHLALFEQDPETDAVLMIGEIGGPQEAEAAAWIKENMS---- 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGFVAG TAP GR MGHAGA+IS A +K M+ G+ +APSP G ++ + Sbjct: 232 KPVVGFVAGLTAPKGRRMGHAGAIISAAGDSAAEKAEIMRSYGLTVAPSPGEFGATMARV 291 Query: 297 LGS 299 + S Sbjct: 292 MES 294 >gi|305666764|ref|YP_003863051.1| succinyl-CoA synthetase subunit alpha [Maribacter sp. HTCC2170] gi|88708988|gb|EAR01222.1| succinyl-CoA synthetase, alpha subunit [Maribacter sp. HTCC2170] Length = 290 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 155/298 (52%), Positives = 206/298 (69%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG G PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIDY-GTNVVGGVTPGKGGQEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+ A+ ++I+VPP+ A DAI+E+ A I +I+ ITEGIPV DMV+ ++ Sbjct: 56 TVEEAVEKAGADTTIIFVPPAFAADAIMEAANAGIKVIITITEGIPVADMVKASDYIKDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP K+GIMPG +F+KG+VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLVGPNCPGVITPGEAKVGIMPGFVFKKGNVGIVSKSGTLTYEAADQVVRQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D T+ +VM+GEIGG E +AAQ+ K G KKPIV Sbjct: 176 IGIGGDPIIGTTTKEAVELLINDPETDCVVMIGEIGGQLEADAAQWYKA---SGSKKPIV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G A+ K M E GI + SPA IG + E++G Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSDDTAQAKKRIMSECGINVVDSPAEIGIKVKEVMG 290 >gi|163755589|ref|ZP_02162708.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [Kordia algicida OT-1] gi|161324502|gb|EDP95832.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [Kordia algicida OT-1] Length = 290 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 156/298 (52%), Positives = 211/298 (70%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIEY-GTNVVGGVTPGKGGQTHLDK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV+EA E+ A+ ++I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DM +V A + Sbjct: 56 TVSEAVEKVGADTTIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMTKVAAYISDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP K+GIMPG +F++G VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLVGPNCPGVITPGEAKVGIMPGFVFKEGKVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + DEATE +VM+GEIGG E +AA++ K+ G KKP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLINDEATECVVMIGEIGGQLEADAAKWYKE---SGSKKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G AE K M+E GI + SPA IG+ + E++G Sbjct: 233 GFIAGETAPKGRTMGHAGAIVGGADDTAEAKKRIMRECGIHVVDSPAEIGKKVAEVVG 290 >gi|331212315|ref|XP_003307427.1| succinyl-CoA ligase subunit alpha [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309297830|gb|EFP74421.1| succinyl-CoA ligase subunit alpha [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 330 Score = 281 bits (719), Expect = 7e-74, Method: Composition-based stats. Identities = 159/302 (52%), Positives = 214/302 (70%), Gaps = 20/302 (6%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + K+TK TFH ++ + Y T+ VGG+ PKK G +PVF + Sbjct: 39 NLRIHKDTK----------ATFHCKEGLAY-GTKFVGGVSPKKAGQQHLG----LPVFGS 83 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T +A+VIYVPP A DA+IE++E EI LIVCITEGIP D VR+ L+ +S Sbjct: 84 VTQAVKETKPDATVIYVPPPFAADAVIEAVENEIGLIVCITEGIPQQDEVRIAQVLKSQS 143 Query: 121 SSRLIGPNCPGILTP---DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 SRL+GPNCPGI++P CKIGIMP +IF G +G++SRSGTLTYEAV QT++ GLGQ Sbjct: 144 KSRLVGPNCPGIMSPDVGGGCKIGIMPSNIFSPGCIGVVSRSGTLTYEAVDQTTKVGLGQ 203 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRK 236 + VGIGGDP GT+ IDVL+ F+ D+AT+ IV++GEIGGS EEEAA++LK R Sbjct: 204 TLCVGIGGDPFPGTQHIDVLKAFMEDDATKGIVLIGEIGGSMEEEAAEYLKQFNKSRSVP 263 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V F+AG+TAPPGR MGHAGA+ISGGKG AEDK+ A++EAG ++ SPA++G +++ Sbjct: 264 KPVVSFIAGRTAPPGRRMGHAGAIISGGKGKAEDKVKALEEAGAVVSDSPAKLGDLMLKA 323 Query: 297 LG 298 + Sbjct: 324 MK 325 >gi|182436515|ref|YP_001824234.1| succinyl-CoA synthetase subunit alpha [Streptomyces griseus subsp. griseus NBRC 13350] gi|326777137|ref|ZP_08236402.1| succinyl-CoA synthetase, alpha subunit [Streptomyces cf. griseus XylebKG-1] gi|178465031|dbj|BAG19551.1| putative succinyl-CoA synthetase alpha chain [Streptomyces griseus subsp. griseus NBRC 13350] gi|326657470|gb|EGE42316.1| succinyl-CoA synthetase, alpha subunit [Streptomyces cf. griseus XylebKG-1] Length = 294 Score = 281 bits (719), Expect = 7e-74, Method: Composition-based stats. Identities = 144/301 (47%), Positives = 201/301 (66%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT+ +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGATGMKHTK-LMLADGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 +VAEA E+T AN SV++VPP+ + A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 SVAEAMEKTGANVSVLFVPPAFSKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAYAGAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA F+K KP Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPETDLIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P + E+LG Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAKLAREILG 293 Query: 299 S 299 + Sbjct: 294 A 294 >gi|268679714|ref|YP_003304145.1| succinyl-CoA synthetase, subunit alpha [Sulfurospirillum deleyianum DSM 6946] gi|268617745|gb|ACZ12110.1| succinyl-CoA synthetase, alpha subunit [Sulfurospirillum deleyianum DSM 6946] Length = 290 Score = 281 bits (719), Expect = 7e-74, Method: Composition-based stats. Identities = 154/299 (51%), Positives = 208/299 (69%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ K+TKV+VQG TGK G+FH EQ + Y TQ+VGG+ P KG + G PVF Sbjct: 1 MSILIHKDTKVVVQGFTGKEGSFHAEQCMAY-GTQIVGGVTPGKGGSVHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T A S+++VPP+ DAI+E+ +A I L V ITEG PV DM R KA K Sbjct: 56 TMKEAIASTGATVSMVFVPPAFVADAILEAADAGIELAVIITEGAPVRDMQRSKAYATKK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + IGPNCPGI+T + CKIGIMPG+IF+KGS+G++S+SGTLTYE Q +EG G STA Sbjct: 116 GMKTIGPNCPGIITAEECKIGIMPGAIFKKGSIGLISKSGTLTYEGANQVCKEGFGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G + ++L +F D TE+IVM+GEIGG E +AAQF+K+ KPIV Sbjct: 176 IGIGGDPIIGLSYKELLAMFEEDSQTEAIVMIGEIGGDLEIQAAQFIKEHIS----KPIV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG++AP G+ MGHAGA++SG A++K++A+ G+ + SPA+IG+ + E+L Sbjct: 232 AFIAGQSAPKGKRMGHAGAIVSGSSCTAQEKMSALALVGVHVVKSPAQIGKKVAEVLNK 290 >gi|290956174|ref|YP_003487356.1| succinyl-coa synthetase subunit alpha [Streptomyces scabiei 87.22] gi|260645700|emb|CBG68791.1| succinyl-coa synthetase alpha chain [Streptomyces scabiei 87.22] Length = 294 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 136/299 (45%), Positives = 189/299 (63%), Gaps = 7/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + + ++VLVQG+TG G HT + +L T VVGG++P+K VPVF Sbjct: 1 MAIYLTQESRVLVQGMTGGEGMKHTRR-MLAAGTNVVGGVNPRKAGRTVDFDERAVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAE E T A+ +V++VPP+ A A++E+ +A I L V ITEGIPV D V A Sbjct: 60 SVAEGIEATGADVTVVFVPPAFAKAAVVEAADAGIGLAVVITEGIPVHDSVAFTAYARSR 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R++GPNCPG++TP GI+P I + G VG++S+SGTLTY+ +++ G ST Sbjct: 120 GTRIVGPNCPGLITPGQSNAGIIPADITKPGRVGLVSKSGTLTYQLMYELRDT--GFSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L F D TE IV++GEIGG AEE AA +++D KP+V Sbjct: 178 VGIGGDPVVGTTHIDCLAAFQDDPDTELIVLIGEIGGDAEERAAAYVRDHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP GRTMGHAGA++SG G A+ K A++ G+ + +P R ++ L S Sbjct: 234 GYIAGFTAPEGRTMGHAGAIVSGSSGTAQAKKEALEAVGVRVGGTPTETARLVLAALES 292 >gi|78191458|gb|ABB29950.1| succinyl-CoA ligase alpha 1 subunit-like [Solanum tuberosum] Length = 262 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 169/264 (64%), Positives = 203/264 (76%), Gaps = 8/264 (3%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 +VGG+ PKKG T G +PVF TVAEAK T ANASVIYVPP A AI+E +EAE+ Sbjct: 1 MVGGVTPKKGGTEHLG----LPVFNTVAEAKAETKANASVIYVPPPFAAAAIMEGLEAEL 56 Query: 96 PLIVCITEGIPVLDMVRVKARLEKS-SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 LIVCITEGIP DMVRVKA L+K +RLIGPNCPGI+ P CKIGIMPG I + G +G Sbjct: 57 DLIVCITEGIPQHDMVRVKAALKKQSRTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIG 116 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 I+SRSGTLTYEAVFQT+ GLGQST VGIGGDP GT F+D LE F+AD TE IV++GE Sbjct: 117 IVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFIADPQTEGIVLIGE 176 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 IGG+AEE+AA +K+ G +KP+V F+AG TAPPGR MGHAGA++SGGKG A+DKI A Sbjct: 177 IGGTAEEDAAALIKE---SGTQKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKA 233 Query: 275 MKEAGICIAPSPARIGRSLVELLG 298 +KEAG+ + SPA+IG S++E+ Sbjct: 234 LKEAGVTVCESPAKIGVSMLEVFK 257 >gi|226365052|ref|YP_002782835.1| succinyl-CoA synthetase subunit alpha [Rhodococcus opacus B4] gi|226243542|dbj|BAH53890.1| succinyl-CoA synthetase alpha chain [Rhodococcus opacus B4] Length = 300 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 151/303 (49%), Positives = 205/303 (67%), Gaps = 10/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 M+I + K++KV+VQG+TG GT HT +L TQVVGG++ +K T T G V +PVF Sbjct: 1 MAIFLTKDSKVIVQGITGGEGTKHTA-LMLKAGTQVVGGVNARKAGTTVTHDGGVELPVF 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--L 117 TVAEA E+T A+ S+ +VPP+ A DAI+E+I+AEIPL+V ITEGIPV D A Sbjct: 60 GTVAEAIEKTGADVSIAFVPPAFAKDAIVEAIDAEIPLLVVITEGIPVQDSAYAWAYNVS 119 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + + +R+IGPNCPGI+TP +GI P +I G +G++S+SGTLTY+ +F+ G Sbjct: 120 KGNKTRIIGPNCPGIITPGESLVGITPANIAGSGPIGLVSKSGTLTYQMMFELRD--FGF 177 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K K Sbjct: 178 STAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKANV----TK 233 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+VG+VAG TAP G+TMGHAGA++SG G A+ K +A++ AG+ + +P+ E+L Sbjct: 234 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKDALEAAGVKVGKTPSETAALAREIL 293 Query: 298 GSL 300 SL Sbjct: 294 QSL 296 >gi|262201314|ref|YP_003272522.1| succinyl-CoA synthetase subunit alpha [Gordonia bronchialis DSM 43247] gi|262084661|gb|ACY20629.1| succinyl-CoA synthetase, alpha subunit [Gordonia bronchialis DSM 43247] Length = 304 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 148/311 (47%), Positives = 203/311 (65%), Gaps = 18/311 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++K+ K++VQG+TG GT HT +L + +VGG++ +K T G +V Sbjct: 1 MSIFLNKDNKIIVQGITGGEGTKHTA-LMLKAGSNIVGGVNARKAGTTVAHTAKDGSDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA + T A+ S+ +VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAIKETGADTSIAFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 R------LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 E +R+IGPNCPGI+TP+ +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 YNLEKGGSEGPKTRIIGPNCPGIITPEESLVGITPANITGKGPIGLVSKSGTLTYQMMYE 179 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 180 LRD--LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYVKA 237 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 238 NVS----KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSET 293 Query: 290 GRSLVELLGSL 300 + EL SL Sbjct: 294 AKLARELYESL 304 >gi|197122637|ref|YP_002134588.1| succinyl-CoA synthetase, subunit alpha [Anaeromyxobacter sp. K] gi|196172486|gb|ACG73459.1| succinyl-CoA synthetase, alpha subunit [Anaeromyxobacter sp. K] Length = 341 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 172/300 (57%), Positives = 223/300 (74%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD+NT+VLVQG+TG AG+FH EQ + Y T VV G+ P +G T + G VP+F Sbjct: 1 MSILVDRNTRVLVQGITGSAGSFHAEQMLAY-GTNVVAGVTPNRGGTRFQGT---VPIFH 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TVA A + T ANA+ I+VPP A DAIIE+ E++I LIV ITEGIPVLDMVRV+ +E + Sbjct: 57 TVAAAVKETGANAAAIFVPPPFAADAIIEAAESDIELIVAITEGIPVLDMVRVRRYVESR 116 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPG++TP CKIGIMPG + R G +G++SRSGTL YEAV Q S GLGQST Sbjct: 117 PKTRLVGPNCPGVITPGQCKIGIMPGHVHRPGRIGVVSRSGTLNYEAVKQLSDLGLGQST 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +VGIGGDPV GT+F+ L+LF D T++++M+GEIGG EE+ A+F++D KP+ Sbjct: 177 SVGIGGDPVHGTDFVQALQLFEDDPETDAVIMIGEIGGGEEEKGAEFVRDHM----TKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VGF+AG+TAPPG+ MGHAGAVISGG G A+ K+ AM+EAGI + P +GR++ + L Sbjct: 233 VGFIAGRTAPPGKRMGHAGAVISGGAGTADAKMAAMREAGIVVVDGPHLLGRAMKDALSR 292 >gi|189190502|ref|XP_001931590.1| succinyl-CoA ligase subunit alpha [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973196|gb|EDU40695.1| succinyl-CoA ligase subunit alpha [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 328 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 170/297 (57%), Positives = 219/297 (73%), Gaps = 8/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKVL QG TGK GTFH +QAI Y T+VVGG +PKK T G +PVF + Sbjct: 33 NLRINGDTKVLFQGFTGKQGTFHAQQAIEY-GTKVVGGTNPKKAGTQHLG----LPVFKS 87 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VA+A + T A+A+ I+VPP A +I E+I AE+PLIV ITEGIP DMVR+ L+ ++ Sbjct: 88 VADAVKETQASATAIFVPPPVAAASIEEAIAAEVPLIVTITEGIPQHDMVRITDMLKSQN 147 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR++GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 148 KSRMVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 207 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA FLK+ KP+V Sbjct: 208 VGIGGDPFSGTNFIDCLKVFLKDEETDGIIMIGEIGGSAEEDAADFLKEYNTA--NKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APPGR MGHAGA++SGGKG A KI A++ AG+ + SPA++G +L + Sbjct: 266 SFIAGISAPPGRRMGHAGAIVSGGKGDANSKITALEAAGVTVERSPAKLGSTLYDQF 322 >gi|170750064|ref|YP_001756324.1| succinyl-CoA synthetase subunit alpha [Methylobacterium radiotolerans JCM 2831] gi|170656586|gb|ACB25641.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium radiotolerans JCM 2831] Length = 296 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 139/303 (45%), Positives = 197/303 (65%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T ++VQG+TG GTFH ++ + Y T VVGG+ P KG G +PVF Sbjct: 1 MSILIDETTPIIVQGITGDKGTFHAKEMLDY-GTNVVGGVTPGKGGRTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 TV EA T A S+ +V P A DAI+E+ +A + L+ IT+GIP DM+RVK L Sbjct: 56 TVKEAVAATGATTSITFVAPPFAADAIMEAADAGLRLVCSITDGIPAQDMMRVKRYLYRY 115 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ + ++GPNC GI++P +GIMPG I+ G+VG++SRSGTL YEA Q + GLG Sbjct: 116 PKEKRTMVVGPNCAGIISPGKAMLGIMPGHIYLPGNVGVISRSGTLGYEAASQLKELGLG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L LF D T++++M+GEIGG E EA+ ++++ Sbjct: 176 ISTSVGIGGDPINGSSFLDHLALFETDPDTDAVLMIGEIGGPQEAEASAWIRENMS---- 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++GFVAG TAP GR MGHAGA+IS A +K M+ G+ +AP P G+++ ++ Sbjct: 232 KPVIGFVAGLTAPKGRRMGHAGAIISAAGDSAAEKAEIMRSYGLTVAPDPGSFGQTVADV 291 Query: 297 LGS 299 L Sbjct: 292 LAR 294 >gi|111022540|ref|YP_705512.1| succinyl-CoA synthetase subunit alpha [Rhodococcus jostii RHA1] gi|110822070|gb|ABG97354.1| succinate--CoA ligase alpha subunit [Rhodococcus jostii RHA1] Length = 300 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 151/303 (49%), Positives = 205/303 (67%), Gaps = 10/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 M+I + K++KV+VQG+TG GT HT +L TQVVGG++ +K T T G V +PVF Sbjct: 1 MAIFLTKDSKVIVQGITGGEGTKHTA-LMLKAGTQVVGGVNARKAGTTVTHDGGVELPVF 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--L 117 TVAEA E+T A+ S+ +VPP+ A DAI+E+I+AEIPL+V ITEGIPV D A Sbjct: 60 GTVAEAIEKTGADVSIAFVPPAFAKDAIVEAIDAEIPLLVVITEGIPVQDSAYAWAYNVS 119 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + + +R+IGPNCPGI+TP +GI P +I G +G++S+SGTLTY+ +F+ G Sbjct: 120 KGNKTRIIGPNCPGIITPGESLVGITPANIAGTGPIGLVSKSGTLTYQMMFELRD--FGF 177 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K K Sbjct: 178 STAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKANV----TK 233 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+VG+VAG TAP G+TMGHAGA++SG G A+ K +A++ AG+ + +P+ E+L Sbjct: 234 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKDALEAAGVKVGKTPSETAALAREIL 293 Query: 298 GSL 300 SL Sbjct: 294 QSL 296 >gi|88855830|ref|ZP_01130493.1| succinyl-CoA synthetase alpha subunit [marine actinobacterium PHSC20C1] gi|88815154|gb|EAR25013.1| succinyl-CoA synthetase alpha subunit [marine actinobacterium PHSC20C1] Length = 295 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 148/302 (49%), Positives = 210/302 (69%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K++KV+VQG+TG GT HT +L TQVVGG++ +K T G+V +PVF Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHTA-LMLAAGTQVVGGVNARKAGTTVLHGDVELPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+T A+ S+ +VPP+ +A++E+I+AEIPL+V ITEG+PV D A ++ Sbjct: 60 TVAEAMEKTGADVSIAFVPPAFTKNAVVEAIDAEIPLLVIITEGVPVGDSAEFWAYAQEK 119 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ LG S Sbjct: 120 GNKTRIIGPNCPGIITPGEALVGITPANITGKGPIGLVSKSGTLTYQMMYELRD--LGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID LE F AD T++IVM+GEIGG AEE AA ++K KP Sbjct: 178 TAIGIGGDPIIGTTHIDALEAFEADPETKAIVMIGEIGGDAEERAADYIKAHV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + + E+L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKQEALEAAGVKVGKTPSEAAKLMREILA 293 Query: 299 SL 300 +L Sbjct: 294 TL 295 >gi|71908975|ref|YP_286562.1| succinyl-CoA synthetase subunit alpha [Dechloromonas aromatica RCB] gi|71848596|gb|AAZ48092.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Dechloromonas aromatica RCB] Length = 297 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 149/305 (48%), Positives = 208/305 (68%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++KNT+++ QG+TGK G FHTE+ Y + V G++PKK N+P+ Sbjct: 1 MSIFINKNTRIITQGITGKTGQFHTEKCQEYANGKECFVAGVNPKKAGESI----FNIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EA T A SVIYVPP GA AI E++EA++ + +CITEGIPV DM+ ++ +++ Sbjct: 57 YASVKEAAAETGATVSVIYVPPPGAAAAIWEAVEADLDMAICITEGIPVRDMLMLRNKMK 116 Query: 119 KSS------SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + + L+GPNCPG++TPD KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ Sbjct: 117 EKEAKGGKKTLLLGPNCPGLITPDEVKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAA + K+ Sbjct: 177 IGLGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAAMWCKENM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+ G + +P+ + + Sbjct: 236 ---KKPIVGFIAGVTAPAGKRMGHAGALISGGADTADAKLEIMEACGFTVTRNPSEMAKL 292 Query: 293 LVELL 297 L LL Sbjct: 293 LKALL 297 >gi|288931611|ref|YP_003435671.1| succinyl-CoA synthetase, subunit alpha [Ferroglobus placidus DSM 10642] gi|288893859|gb|ADC65396.1| succinyl-CoA synthetase, alpha subunit [Ferroglobus placidus DSM 10642] Length = 292 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 145/299 (48%), Positives = 212/299 (70%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I++D+NTK +VQG+TG G FHTE+ + Y T++V G+ P KG + G VPVF Sbjct: 1 MAIIIDENTKAIVQGITGSQGRFHTERMLAY-GTKIVAGVTPGKGGSEVLG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 V+EA E+T ANASVI+VP A DAI E++EA + ++VCITEGIPV D ++ R++++ Sbjct: 56 RVSEAVEKTGANASVIFVPAPFATDAIFEAVEAGVEVVVCITEGIPVYDELKAYKRVKEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG+++ +GIMP IF++G+VGI+SRSGTLTY+ + ++ G+GQST Sbjct: 116 GVILIGPNCPGVISVGKSHLGIMPTQIFKEGNVGIVSRSGTLTYQIAYNLTRLGIGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGD + G F+++LE+F D+ T+ +V++GEIGG+ EEEAA+F+ ++ KP+V Sbjct: 176 VGIGGDRIVGMSFVEILEMFEEDDQTDLVVLIGEIGGTDEEEAAKFI----EKKMSKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAPPG+ MGHAGA+I GG+G AE KI A++E G+ + +P + + L Sbjct: 232 GYIAGITAPPGKRMGHAGAIIEGGRGTAESKIKALEEVGVEVGRTPMEVAEIVKRKLED 290 >gi|53803923|ref|YP_114180.1| succinyl-CoA synthase subunit alpha [Methylococcus capsulatus str. Bath] gi|53757684|gb|AAU91975.1| succinyl-CoA synthase, alpha subunit [Methylococcus capsulatus str. Bath] Length = 300 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 145/297 (48%), Positives = 202/297 (68%), Gaps = 6/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV-NVPVF 59 MS+ V+K++KV+ QG TG+ TFH + A+ T+VVGG+ P KG T + ++PVF Sbjct: 1 MSVFVNKHSKVIFQGFTGEHATFHAKDAM-RMGTRVVGGVTPGKGGTRHPDPELAHLPVF 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAEA T A+ S ++VPP DA++E+I+A I + V I +GIPV DM+R++ Sbjct: 60 DTVAEAVAATGADVSAVFVPPPFNADALMEAIDAGIRVAVTIADGIPVHDMIRLQRYRVG 119 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S +IGPN PGI+TP CK+GIMP I++KG+VGI+SRSGTL YEA Q + GLG +T Sbjct: 120 KDSIVIGPNTPGIITPGECKVGIMPSHIYKKGNVGIVSRSGTLNYEATEQMAALGLGITT 179 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +VGIGGDP+ GT+F+ VL F AD TE +VM+GEIGG E AA++ K+ KP+ Sbjct: 180 SVGIGGDPINGTDFVTVLRAFEADPETEIVVMIGEIGGPQEVAAARWAKENM----TKPV 235 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +GFVAG AP GR MGHAGA+IS A K++AM+ G+ +A +PA+IG++++ Sbjct: 236 IGFVAGLAAPTGRRMGHAGAIISSEADTAGAKMDAMEALGLYVARNPAQIGQTVLRA 292 >gi|218884351|ref|YP_002428733.1| succinyl-CoA synthetase, alpha subunit [Desulfurococcus kamchatkensis 1221n] gi|218765967|gb|ACL11366.1| succinyl-CoA synthetase, alpha subunit [Desulfurococcus kamchatkensis 1221n] Length = 291 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 137/298 (45%), Positives = 199/298 (66%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M I+VD T+VLVQG+TG+ G FHT+ + Y T++V G P KG TY G VPV+ Sbjct: 1 MGIIVDSRTRVLVQGITGREGGFHTKLMLEY-GTKIVAGTSPGKGGTYVHG----VPVYN 55 Query: 61 TV-AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 ++ +E+ +AS+I+VP A DA+ E+++ + IV ITEGIP+ D +R Sbjct: 56 SINEAIREQGTIDASIIFVPARFASDAVYEAVDNGVKTIVVITEGIPLHDELRFVNYARS 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S LIGPN PGI+T K+GIMP +F+ G +GI+SRSGTLTYE + ++G G ST Sbjct: 116 RSVTLIGPNTPGIMTVGEAKLGIMPSHVFKPGRIGIVSRSGTLTYEVARELIKQGYGVST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +G+GGDPV G +FIDV ++F D++T+++V++GEIGG AEE A+F R KP+ Sbjct: 176 VLGLGGDPVTGLDFIDVFKMFSKDDSTDAVVLIGEIGGDAEERFARFYSQYDGR---KPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V ++AG+TAPPG+ MGHAGA+IS G G K ++++EAGI +A +P++I + L ++L Sbjct: 233 VAYIAGRTAPPGKRMGHAGAIISMGIGDYASKRSSLEEAGIPVADTPSQIHQLLSKIL 290 >gi|89902703|ref|YP_525174.1| succinyl-CoA synthetase subunit alpha [Rhodoferax ferrireducens T118] gi|89347440|gb|ABD71643.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodoferax ferrireducens T118] Length = 297 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 152/305 (49%), Positives = 208/305 (68%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+TKV+ QG+TGK G FHTE+ Y V G++PKK ++P+ Sbjct: 1 MSILINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGEKI----FDIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V EA +T A SVIYVPP+GA AI E++EA++ L +CITEGIP+ DM+ V+ ++ Sbjct: 57 FASVKEAASQTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPIRDMLEVRNKMR 116 Query: 119 ------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TPD KIGIMP I RKG +G++SRSGTLTYEAV Q ++ Sbjct: 117 AKVAAGGKETLLLGPNCPGLITPDEIKIGIMPAHIHRKGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + ID++ LF D T++++M+GEIGG E +AA++ K Sbjct: 177 IGLGQSSAVGIGGDPINGLKHIDIMRLFNDDPDTDAVIMIGEIGGPDEADAARWCKANM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAP G+ MGHAGA+ISGG AE K+ M+E G I +P+ + + Sbjct: 236 ---KKPIVGFIAGVTAPAGKRMGHAGALISGGGDTAEAKLAVMEECGFKITRNPSELAKL 292 Query: 293 LVELL 297 L +L Sbjct: 293 LKAML 297 >gi|86133486|ref|ZP_01052068.1| Succinyl-CoA synthetase, alpha subunit [Polaribacter sp. MED152] gi|85820349|gb|EAQ41496.1| Succinyl-CoA synthetase, alpha subunit [Polaribacter sp. MED152] Length = 290 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 159/298 (53%), Positives = 215/298 (72%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K++VQG TG GTFH Q I Y T VVGG+ P KG G PVF Sbjct: 1 MSVLVNKNSKIIVQGFTGSEGTFHAGQMIDY-GTNVVGGVTPGKGGQEHLGK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+ A+ S+I+VPP+ A DAI+ES +A I +I+CITEGIP DMV+VKA + Sbjct: 56 TVVEAVEKAGADTSIIFVPPAFAADAIMESADAGIKVIICITEGIPTADMVKVKAYIADK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TPD K+GIMPG IF+KG VGI+S+SGTLTYEA Q ++G G +TA Sbjct: 116 DTRLVGPNCPGVITPDEAKVGIMPGFIFKKGKVGIVSKSGTLTYEAADQVVKQGYGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +E+ + D+ TE+IVM+GEIGG+ E EAAQ++K + G +KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVEMLMNDDETEAIVMIGEIGGNLEAEAAQWIKAD---GNRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G A+ K+ ++E G+ + SPA+IG + +L Sbjct: 233 GFIAGQTAPAGRTMGHAGAIVGGADDTAQAKMKILEENGVHVVSSPAKIGEMVASVLK 290 >gi|288560348|ref|YP_003423834.1| succinate-CoA ligase alpha subunit SucD [Methanobrevibacter ruminantium M1] gi|288543058|gb|ADC46942.1| succinate-CoA ligase alpha subunit SucD [Methanobrevibacter ruminantium M1] Length = 289 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 140/297 (47%), Positives = 197/297 (66%), Gaps = 9/297 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I++D+N K LVQG+TGK G+FHTEQ + Y T++V G+ P KG G VPVF ++ Sbjct: 2 IILDENVKCLVQGITGKQGSFHTEQMLKY-NTKIVAGVTPGKGGQEILG----VPVFDSI 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EAKE T NAS+I+VP A DA ESI+ +I+ P+ D + + A + Sbjct: 57 EEAKENTDVNASIIFVPAPFAKDAAFESIDHLDLVIIITRATFPIHDTMEIMAYAKAKGV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PG+++P K+GIMP IF +G+VG++SRSGTLTYE Q S+ +GQST VG Sbjct: 117 TVIGPNTPGVISPKVGKLGIMPTHIFSEGTVGVISRSGTLTYEIASQLSRAEIGQSTCVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT +I+VL++F D T IV++GEIGGSAEE+AA ++K+ KP+V + Sbjct: 177 IGGDPVIGTPYIEVLQMFEDDPETTEIVLIGEIGGSAEEDAAAYIKENI----TKPVVAY 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 +AG +APPG+ MGHAGA+I+G G A+ K+ A++ AG+ +A P+ I + E+ G Sbjct: 233 IAGISAPPGKRMGHAGAIIAGNSGTAKSKMEALESAGVKVARKPSEIVEYIKEIRGE 289 >gi|86130217|ref|ZP_01048817.1| Succinyl-CoA synthetase, alpha subunit [Dokdonia donghaensis MED134] gi|85818892|gb|EAQ40051.1| Succinyl-CoA synthetase, alpha subunit [Dokdonia donghaensis MED134] Length = 290 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 153/298 (51%), Positives = 209/298 (70%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIDY-GTNVVGGVTPGKGGQVHLDK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+ A+ ++I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DM++ + Sbjct: 56 TVQEAVEKVGADTTIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMIKASDYIATK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++TP K+GIMPG +F++G VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 ECRLIGPNCPGVITPGEAKVGIMPGFVFKEGKVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D ATE++VM+GEIGG E +AA++ K+ G KKP++ Sbjct: 176 IGIGGDPIIGTTTKEAVELLINDPATEAVVMIGEIGGQLEGDAAKWYKE---SGSKKPVI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G A+ K M+E GI + SPA IG+ + E+LG Sbjct: 233 GFIAGETAPAGRTMGHAGAIVGGSDDTAQAKKAIMRECGIHVVDSPAEIGKKVAEVLG 290 >gi|257054563|ref|YP_003132395.1| succinyl-CoA synthetase subunit alpha [Saccharomonospora viridis DSM 43017] gi|256584435|gb|ACU95568.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Saccharomonospora viridis DSM 43017] Length = 295 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 144/302 (47%), Positives = 197/302 (65%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++ +K++VQGLTG G+ H + +L + +VGG++ +K T G ++ VF Sbjct: 1 MSIFLNSESKIIVQGLTGSEGSKHAAK-MLAAGSNIVGGVNARKAGQTVTIGGKDLTVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 TV EA + T AN SVI+VPP A DA+IE+I+AEIPL V ITEGIPV D A + Sbjct: 60 TVEEAMKETGANVSVIFVPPKFAKDAVIEAIDAEIPLAVVITEGIPVHDSAAFWAHACAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI++P GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGIISPGQSNAGIIPADITGPGKIGLVSKSGTLTYQMMYELRD--IGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDP+ GT ID LE F AD TE IVM+GEIGG AEE AA+++K KP Sbjct: 178 TAVGIGGDPIIGTTHIDALEAFQADPETELIVMIGEIGGDAEERAAEYIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P EL Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAELARELYK 293 Query: 299 SL 300 +L Sbjct: 294 AL 295 >gi|21223187|ref|NP_628966.1| succinyl-CoA synthetase subunit alpha [Streptomyces coelicolor A3(2)] gi|256785714|ref|ZP_05524145.1| succinyl-CoA synthetase subunit alpha [Streptomyces lividans TK24] gi|289769606|ref|ZP_06528984.1| succinyl-CoA synthetase subunit alpha [Streptomyces lividans TK24] gi|8218210|emb|CAB92672.1| succinyl CoA synthetase alpha chain [Streptomyces coelicolor A3(2)] gi|289699805|gb|EFD67234.1| succinyl-CoA synthetase subunit alpha [Streptomyces lividans TK24] Length = 294 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 142/300 (47%), Positives = 199/300 (66%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++K++KV+VQG+TG G HT+ +L T+VVGG++P+K T VPVF Sbjct: 1 MAIWLNKDSKVIVQGMTGATGMKHTK-LMLGDGTEVVGGVNPRKAGTSVDFDGNEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TV EA E+T AN SVI+VP DA++E+I+AEIPL V ITEGI V D + + Sbjct: 60 TVKEAIEKTGANVSVIFVPEKFTKDAVVEAIDAEIPLAVVITEGIAVHDSAAFWSYAGKK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI+TP +GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGIITPGQSNVGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA+++ + KP Sbjct: 178 TAVGIGGDPIIGTTHIDALAAFEADPETDLIVMIGEIGGDAEERAAEYI----SKNVTKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P + +L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAKLARAILA 293 >gi|296447388|ref|ZP_06889314.1| succinyl-CoA synthetase, alpha subunit [Methylosinus trichosporium OB3b] gi|296255091|gb|EFH02192.1| succinyl-CoA synthetase, alpha subunit [Methylosinus trichosporium OB3b] Length = 295 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 145/303 (47%), Positives = 197/303 (65%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T +LVQG+TG G+FH ++ I Y T VV G+ P KG G VP+F Sbjct: 1 MSILIDEKTPILVQGITGDKGSFHAKEMIDY-GTNVVAGVTPGKGGKTVHG----VPIFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 TV EA ++T A S+ +V P A DAI+E+ +A I LI IT+GIP DM+RVK Sbjct: 56 TVREAVKQTGATTSITFVAPPFAADAIMEAADAGIRLICSITDGIPAQDMMRVKRYFLRY 115 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + ++GPNC GI++P +GIMPG I+++G+VG++SRSGTL YEA Q + G+G Sbjct: 116 PRERRPTMVGPNCAGIISPGKAMLGIMPGHIYKQGNVGLISRSGTLGYEAASQLKELGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L LF D TE+++++GEIGG E EAA ++K+ Sbjct: 176 ISTSVGIGGDPINGSSFLDHLVLFDQDPETEAVLIIGEIGGPQEAEAAAWIKEN----FS 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VGFVAG TAP GR MGHAGA+IS A +K MK G+ +APSPA G ++ + Sbjct: 232 KPVVGFVAGLTAPKGRRMGHAGAIISATGDSAAEKTEIMKSYGLTVAPSPAEFGSAVASV 291 Query: 297 LGS 299 L Sbjct: 292 LKR 294 >gi|114330620|ref|YP_746842.1| succinyl-CoA synthetase subunit alpha [Nitrosomonas eutropha C91] gi|114307634|gb|ABI58877.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nitrosomonas eutropha C91] Length = 295 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 134/304 (44%), Positives = 194/304 (63%), Gaps = 13/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+++ T+++VQG TG+ GTFH ++ I Y + VVGG+ P KG G +PVF Sbjct: 1 MAILINERTRIIVQGFTGRIGTFHAQEMIDY-GSNVVGGVTPGKGGQKHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 TV EA E+ A AS+++VPP+ A D+I+E+ +A I V IT+GIP DM+ VK L Sbjct: 56 TVREAVEQAGAEASIVFVPPAFAADSIMEAADAGIKYCVSITDGIPTQDMMTVKNFLRLF 115 Query: 119 --KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ L GPNC G ++P +GIMPG I+ +G VG++ RSGTL YEA Q + +G Sbjct: 116 PKQNRMVLSGPNCSGTISPGRSMLGIMPGHIYSQGIVGVVGRSGTLGYEAADQMRRLNIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ D+LE D T+ +M+GEIGG E EA F K+ + Sbjct: 176 ISTSVGIGGDPIIGSSHRDILEKLEEDPETKIALMIGEIGGPMEVEAGLFAKENMR---- 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V ++AG TAP GR MGHAGA+IS A +K+ ++E G+ I P+P+ +G ++ ++ Sbjct: 232 KPLVAYIAGLTAPSGRRMGHAGAIISSTGESAAEKVEQLQELGVTICPTPSMMGETVAKV 291 Query: 297 LGSL 300 L L Sbjct: 292 LAGL 295 >gi|302557240|ref|ZP_07309582.1| succinyl-CoA synthetase, alpha subunit [Streptomyces griseoflavus Tu4000] gi|302474858|gb|EFL37951.1| succinyl-CoA synthetase, alpha subunit [Streptomyces griseoflavus Tu4000] Length = 299 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 135/299 (45%), Positives = 188/299 (62%), Gaps = 7/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KVLVQG+TG G HT + +L T VVGG++P+K VPVF Sbjct: 6 MAIHLTKESKVLVQGMTGGEGMKHTRR-MLAAGTDVVGGVNPRKAGRSVAFDERAVPVFG 64 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAE + T A+ +V++VPP+ A A+ E+ +A I L V ITEGIPV D V A Sbjct: 65 SVAEGMDATGADVTVVFVPPAFAKAAVTEAADAGIGLAVVITEGIPVHDSVAFLAHARPR 124 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ G ST Sbjct: 125 GTRVIGPNCPGLITPGQSNAGIIPADIAKPGRIGLVSKSGTLTYQLMYELRDT--GFSTC 182 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L F D T+ IV++GEIGG AEE AA +++D KP+V Sbjct: 183 VGIGGDPVVGTTHIDCLAAFQDDPDTDLIVLIGEIGGDAEERAAAYIRDHV----TKPVV 238 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP GRTMGHAGA++SG G A K A++ AG+ + +P + ++ +L Sbjct: 239 GYIAGFTAPEGRTMGHAGAIVSGSSGTARAKQEALEAAGVRVGHTPTETAQQVLAVLND 297 >gi|297158167|gb|ADI07879.1| succinyl-CoA synthetase subunit alpha [Streptomyces bingchenggensis BCW-1] Length = 294 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 139/290 (47%), Positives = 191/290 (65%), Gaps = 9/290 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KV+VQG+TG G HT + +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKESKVIVQGMTGSEGQKHTRR-MLASGTNIVGGVNPRKAGTKVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TV EA E T A+ +VI+VP DA+IE+I+AEIPL V ITEGI V D A + Sbjct: 60 TVKEAIEATGADVTVIFVPEKFTKDAVIEAIDAEIPLAVVITEGIAVHDTANFWAYAGQK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+P +I + G +G++S+SGTLTY+ +++ S +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPANITKPGRIGLVSKSGTLTYQMMYELSD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + VGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA F+K KP Sbjct: 178 SCVGIGGDPIIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSE 283 >gi|320581273|gb|EFW95494.1| succinate-CoA ligase [Pichia angusta DL-1] Length = 319 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 166/298 (55%), Positives = 213/298 (71%), Gaps = 7/298 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+ QG TG+ TFH EQA+ Y T++VGG +PKK G PVF + Sbjct: 21 NLKINKDTKVIYQGFTGRQATFHAEQALAY-GTKIVGGTNPKKAGQTHLGK----PVFAS 75 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VA+A + T A AS I+VPP A AI E++ AEIPL+V ITEGIP DM+RV L +S Sbjct: 76 VADAIKETGATASGIFVPPPIAASAIEEAVAAEIPLVVAITEGIPQADMLRVSQLLRTQS 135 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P+ CKIGIMP +I +KG +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 136 KTRLVGPNCPGIIAPEQCKIGIMPQNIHKKGRIGIVSRSGTLTYEAVNQTTKVGLGQSLV 195 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKPI 239 +G+GGDP GT FID L LFL D TE I+++GEIGG AEEEAA++LK R KP+ Sbjct: 196 IGMGGDPCPGTNFIDALTLFLNDPETEGIILIGEIGGEAEEEAAEYLKQYNLTRDVPKPV 255 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V F+AG TAPPGR MGHAGA+ISGGKG A+ KI A+ A + PSP R+G++L + Sbjct: 256 VSFIAGVTAPPGRRMGHAGALISGGKGTAKSKIEALTAAEAVVVPSPGRLGKALYDQF 313 >gi|226227051|ref|YP_002761157.1| succinyl-CoA synthetase alpha chain [Gemmatimonas aurantiaca T-27] gi|226090242|dbj|BAH38687.1| succinyl-CoA synthetase alpha chain [Gemmatimonas aurantiaca T-27] Length = 290 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 153/298 (51%), Positives = 205/298 (68%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +D +TK++VQG+TG+ G+FH +Q I Y T+VV G+ P KG + G P+F Sbjct: 1 MSIFIDNSTKLVVQGITGRDGSFHAKQMIEY-GTKVVAGVTPGKGGQTFEGTA---PIFD 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T AN SVIYVPP A DAI+E+ A + IVCITEG+PVLDM +V +++ Sbjct: 57 TVYDAVQATGANTSVIYVPPMYAADAIMEAAAAGVKFIVCITEGVPVLDMTKVYPYVKEH 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++TP K+GI+PG I G VG++SRSGTLTYE V ++ G+GQST Sbjct: 117 GARLLGPNCPGLITPGESKVGIIPGRICAPGPVGVVSRSGTLTYEVVNALTKAGIGQSTC 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FID L F D T+++ M+GEIGG+ E+EAA F+K+ KP+V Sbjct: 177 VGIGGDPINGTNFIDCLAAFEKDPNTKAVAMMGEIGGTDEQEAATFIKEHM----TKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPGR MGHAGA+ISG G A +KI++ K AG+ +A P + L Sbjct: 233 GFIAGQTAPPGRRMGHAGAIISGSAGTAAEKIDSFKAAGMGVAQRPIDFVELIKARLA 290 >gi|307823359|ref|ZP_07653588.1| succinyl-CoA synthetase, alpha subunit [Methylobacter tundripaludum SV96] gi|307735344|gb|EFO06192.1| succinyl-CoA synthetase, alpha subunit [Methylobacter tundripaludum SV96] Length = 295 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 142/304 (46%), Positives = 193/304 (63%), Gaps = 13/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+D+ T+++VQG TGK G+FH + I Y + VVGGI P KG G +PVF Sbjct: 1 MAILIDETTRIIVQGFTGKIGSFHAQDMINY-GSNVVGGITPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA A AS+I+VPP+ A D+I+E+ +A I V IT+GIP DM+ VK L + Sbjct: 56 TVKEAVREVGAEASIIFVPPAFAADSIMEAADAGIKYCVAITDGIPTQDMMTVKNFLRRF 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L GPNC G ++P +GIMPG I+ +G+VGI+ RSGTL YEA Q + G+G Sbjct: 116 PVEKRMILTGPNCAGTISPGRAMLGIMPGHIYMQGNVGIVGRSGTLGYEAADQMKRLGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ D+LE F AD T+ +VM+GEIGG E EA F K+ Sbjct: 176 ISTSVGIGGDPINGSSHRDILEKFEADPETKVVVMIGEIGGPQEVEAGMFAKEHM----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ ++AG TAP GR MGHAGA+IS A +K+ +KE G+ I P+PA +G ++ + Sbjct: 232 KPVIAYIAGLTAPEGRRMGHAGAIISSAGESAAEKVAILKELGVTICPTPAAMGETVAAV 291 Query: 297 LGSL 300 L L Sbjct: 292 LARL 295 >gi|241764839|ref|ZP_04762844.1| succinyl-CoA synthetase, alpha subunit [Acidovorax delafieldii 2AN] gi|241365634|gb|EER60358.1| succinyl-CoA synthetase, alpha subunit [Acidovorax delafieldii 2AN] Length = 298 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 154/306 (50%), Positives = 205/306 (66%), Gaps = 16/306 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++K+TKV+ QG+TGK G FHTE+ Y V G++PKK N+P+ Sbjct: 1 MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGESI----FNIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 + +V EA +T A SVIYVPP+GA AI E++EA++ + +CITEGIPV DM ++ Sbjct: 57 YASVKEAATQTGATVSVIYVPPAGAAAAIWEAVEADLDMAICITEGIPVRDMLEVRNKMK 116 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K + L+GPNCPGI+TPD KIGIMPG I RKG +G++SRSGTLTYEAV ++ Sbjct: 117 AKEAAGGKKTLLLGPNCPGIITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAMLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQSTAVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAAQ+ K Sbjct: 177 VGLGQSTAVGIGGDPINGLKHIDVMKAFNEDPDTDAVIMIGEIGGPDEAEAAQWCKANM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G + +P+ +G+ Sbjct: 236 ---KKPIVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFVVTRNPSELGKL 292 Query: 293 LVELLG 298 L L Sbjct: 293 LKAQLK 298 >gi|325269209|ref|ZP_08135828.1| succinyl-CoA synthetase subunit alpha [Prevotella multiformis DSM 16608] gi|324988438|gb|EGC20402.1| succinyl-CoA synthetase subunit alpha [Prevotella multiformis DSM 16608] Length = 290 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 144/299 (48%), Positives = 196/299 (65%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNTK++VQG+TG+ G+FH + Y T VVGG P K +G +PVF Sbjct: 1 MSILINKNTKLIVQGITGRDGSFHASKMKEY-GTNVVGGTSPGKAGQEVSG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T AN S+I+VP A DA++E+I+ I L++CITEG+P LD V + Sbjct: 56 TVKDAVAATGANTSIIFVPAPFAKDAMLEAIDGGIKLVICITEGVPTLDAVAAQRYARIK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +IGPNCPG+++PD GIMP +IF+KG G++SRSGTLTYE V+ +Q GLGQSTA Sbjct: 116 GVSVIGPNCPGLISPDESMAGIMPTNIFKKGHTGVISRSGTLTYEVVYNLTQAGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDPV G F ++L +F D T+SI ++GEIGG AEE AA+F+K+ KP+ Sbjct: 176 VGVGGDPVVGLYFEELLRMFQDDPETDSIALIGEIGGDAEERAAKFIKEHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F++G+ APPG+ MGHAGA+IS G G A +KI A + G+ +A I L + L Sbjct: 232 VFISGQQAPPGKQMGHAGAIISSGSGSASEKIAAFEAVGVPVARETREIPELLKKQLNR 290 >gi|257051526|ref|YP_003129359.1| succinyl-CoA synthetase, alpha subunit [Halorhabdus utahensis DSM 12940] gi|256690289|gb|ACV10626.1| succinyl-CoA synthetase, alpha subunit [Halorhabdus utahensis DSM 12940] Length = 289 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 149/297 (50%), Positives = 206/297 (69%), Gaps = 10/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD++T+V+VQG+TG G FH EQ I Y V G + P KG G VPV+ Sbjct: 1 MSILVDEDTRVIVQGITGGEGEFHAEQMIEYGTNVVAGAV-PGKGGQEVHG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A A+ASV++VPP+ A DA+ E+++A + ++V ITEGIP D+ V A LE + Sbjct: 56 TVDRAAREEDADASVVFVPPAFAADALFEALDAPLDVVVAITEGIPTQDVSEVYAELEDT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPG++TP K+GI+PG+IF +GSVG++SRSGTLTY+ V ++ G+GQ+TA Sbjct: 116 DTHLVGPNCPGVITPGESKLGILPGNIFSEGSVGLVSRSGTLTYQIVDSLTERGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT FID LELF AD TE++VM GEIGG EE AA + P+V Sbjct: 176 VGIGGDPIVGTGFIDALELFEADPETEAVVMCGEIGGEDEEAAA----EYIAEEMDTPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVIS-GGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GF+AG+TAPPG+ MGHAGA++S GG G A+ KI+A++ AG+ + +P+ + + ++ Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGGGTGTAQSKIDALEAAGVEVGETPSDVADLVEDI 288 >gi|159039721|ref|YP_001538974.1| succinyl-CoA synthetase subunit alpha [Salinispora arenicola CNS-205] gi|157918556|gb|ABV99983.1| succinyl-CoA synthetase, alpha subunit [Salinispora arenicola CNS-205] Length = 295 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 135/301 (44%), Positives = 194/301 (64%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G+ HT + +L T +VGG++P+K T +PVF Sbjct: 1 MAIWLTKDSKVIVQGMTGSEGSKHTRR-MLAAGTDIVGGVNPRKAGTTVDFDGAQLPVFA 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 +VA+A T A+ +VI+VPP A+IE+I+A I L V ITEG+PV D A + Sbjct: 60 SVADAMRETGADVTVIFVPPQFTKGAVIEAIDAGISLAVVITEGVPVHDTAAFWAYNVAQ 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPGI++P + GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GERTRIIGPNCPGIVSPGAANAGIIPADITGTGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV GT ID L F D T++IVM+GEIGG AEE AA+F+K KP Sbjct: 178 TCVGIGGDPVIGTTHIDALAAFEDDPDTDAIVMIGEIGGDAEERAAEFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG++AG TAPPG+TMGHAGA+ISG G AE K A++ G+ + +P + +++ Sbjct: 234 VVGYIAGFTAPPGKTMGHAGAIISGSAGTAEAKKTALEAVGVKVGKTPTETAGLMRQIMS 293 Query: 299 S 299 + Sbjct: 294 A 294 >gi|312138583|ref|YP_004005919.1| succinyl-CoA synthetase alpha subunit [Rhodococcus equi 103S] gi|325676350|ref|ZP_08156029.1| succinyl-CoA synthetase subunit alpha [Rhodococcus equi ATCC 33707] gi|311887922|emb|CBH47234.1| succinyl-CoA synthetase alpha subunit [Rhodococcus equi 103S] gi|325552911|gb|EGD22594.1| succinyl-CoA synthetase subunit alpha [Rhodococcus equi ATCC 33707] Length = 300 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 149/307 (48%), Positives = 206/307 (67%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 M+I + K++KV+VQG+TG GT HT +L TQVVGG++ +K T G V Sbjct: 1 MAIFLTKDSKVIVQGITGGEGTKHTA-LMLKAGTQVVGGVNARKAGTTVSHTDKDGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TVAEA + T A+ S+ +VPP+ + DAI+E+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFATVAEAMKETGADVSIAFVPPAFSKDAIVEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + + +R+IGPNCPGI+TP+ +GI P +I KG VG++S+SGTLTY+ +F+ + Sbjct: 120 YNVEKGNKTRIIGPNCPGIITPEEALVGITPANIAGKGPVGLVSKSGTLTYQMMFELRE- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -YGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKLIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K +A++ AG+ + +P+ Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKDALEAAGVKVGKTPSETAALA 293 Query: 294 VELLGSL 300 E+L +L Sbjct: 294 REILQNL 300 >gi|326799823|ref|YP_004317642.1| succinyl-CoA synthetase, subunit alpha [Sphingobacterium sp. 21] gi|326550587|gb|ADZ78972.1| succinyl-CoA synthetase, alpha subunit [Sphingobacterium sp. 21] Length = 293 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 161/300 (53%), Positives = 212/300 (70%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG G+FH Q I Y T VVGG+ P KG ++ PVF Sbjct: 1 MSVLVNKDSKVIVQGFTGTEGSFHASQMIEY-GTNVVGGVTPGKGGQTH----LDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T AN S+I+VPP+ A DAI+E+ A + +IVCITEGIP DM++VK L+ Sbjct: 56 TVQDAVDTTGANVSIIFVPPAFAADAIMEAASAGVEVIVCITEGIPTKDMIQVKEYLKDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+T D KIGIMPG IF+KG+VG++S+SGTLTYEAV QT + GLG +TA Sbjct: 116 KSRLIGPNCPGIITADEAKIGIMPGFIFKKGNVGVVSKSGTLTYEAVDQTVKAGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE I+M+GEIGG E EAA+++K+ KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETEGIIMIGEIGGGMEAEAARWIKEH----GTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAPPGR MGHAGA++ G A K+ M+E GI + SPA IG ++ E L + Sbjct: 232 GFIAGQTAPPGRRMGHAGAIVGGADDTAAAKMKIMRECGIRVVESPAEIGVAIAEELAKV 291 >gi|288803534|ref|ZP_06408965.1| succinate-CoA ligase, alpha subunit [Prevotella melaninogenica D18] gi|288333957|gb|EFC72401.1| succinate-CoA ligase, alpha subunit [Prevotella melaninogenica D18] Length = 290 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 142/299 (47%), Positives = 199/299 (66%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TK++VQG+TG+ G+FH + Y T VVGG P K G +PVF Sbjct: 1 MSILINKDTKLIVQGITGRDGSFHASKMKEY-GTNVVGGTSPGKAGQEVCG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T ANAS+I+VP A DA++E+I+ + L++CITEG+P LD V + + Sbjct: 56 TVKDAVAATGANASIIFVPAPFAKDAMLEAIDGGVKLVICITEGVPTLDAVAAQRYAKIK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPG+++P+ GIMP +IF+KG G++SRSGTLTYE V+ +Q GLGQSTA Sbjct: 116 GVKVIGPNCPGLISPEESMAGIMPTNIFKKGHTGVISRSGTLTYEVVYNLTQAGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDPV G F ++L +F D T+SI ++GEIGG AEE AA+F+K+ KP+ Sbjct: 176 VGVGGDPVVGLYFEELLRMFQDDPETDSIALIGEIGGDAEERAAKFIKEHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F++G+ APPG+ MGHAGA+IS G G A +KI A + G+ +A + I L + L Sbjct: 232 VFISGQQAPPGKQMGHAGAIISSGSGSASEKIAAFEAVGVPVARETSEIPELLKKQLKK 290 >gi|194220542|ref|XP_001497635.2| PREDICTED: similar to Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) [Equus caballus] Length = 391 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 175/298 (58%), Positives = 220/298 (73%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DKNTKV+ QG TGK GTFH++QA+ Y V G ++ +PVF TV Sbjct: 95 LYIDKNTKVICQGFTGKQGTFHSQQALEYGTQLVGGT-----TPGKGGKTHLGLPVFNTV 149 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAE+ L+VCITEGIP DMVRVK RL + Sbjct: 150 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEVSLVVCITEGIPQQDMVRVKHRLLRQGK 209 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 210 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRVGIVSRSGTLTYEAVHQTTQVGLGQSLCV 269 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+FID LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 270 GIGGDPFNGTDFIDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKAKPVVS 329 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 330 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQNAGVVVSMSPAQLGTTIYKEFEK 387 >gi|86158053|ref|YP_464838.1| succinyl-CoA synthetase alpha subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85774564|gb|ABC81401.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Anaeromyxobacter dehalogenans 2CP-C] Length = 341 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 172/300 (57%), Positives = 223/300 (74%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD+NT+VLVQG+TG AG+FHTEQ + Y T VV G+ P +G T + G VP+F Sbjct: 1 MSILVDRNTRVLVQGITGSAGSFHTEQMLAY-GTNVVSGVTPNRGGTRFQGT---VPIFH 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TVA A + T ANA+ I+VPP A DAIIE+ EA+I LIV ITEGIPVLDMVRV+ +E + Sbjct: 57 TVAAAVKETGANAAAIFVPPPFAADAIIEAAEADIELIVAITEGIPVLDMVRVRRYVESR 116 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPG++TP CKIGIMPG + R G +G++SRSGTL YEAV Q S GLGQST Sbjct: 117 PKTRLVGPNCPGVITPGQCKIGIMPGHVHRPGRIGVVSRSGTLNYEAVKQLSDLGLGQST 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +VGIGGDPV GT+F+ L+LF D T++++M+GEIGG EE+ A F+++ KP+ Sbjct: 177 SVGIGGDPVHGTDFVQALQLFEDDPDTDAVIMIGEIGGGEEEKGAAFVREHM----TKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VGF+AG+TAPPG+ MGHAGAVISGG G A+ K+ AM+EAG+ + P +GR++ + L Sbjct: 233 VGFIAGRTAPPGKRMGHAGAVISGGAGTADAKMAAMREAGVVVVDGPHLLGRAMKDALSR 292 >gi|121606839|ref|YP_984168.1| succinyl-CoA synthetase subunit alpha [Polaromonas naphthalenivorans CJ2] gi|120595808|gb|ABM39247.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Polaromonas naphthalenivorans CJ2] Length = 298 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 153/306 (50%), Positives = 204/306 (66%), Gaps = 16/306 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++KNTKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSIYINKNTKVITQGITGKTGQFHTRMCREYANGKEAFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F V EA + T A SVIYVPP+GA AI E++EA + L +CITEGIPV DM+ V+ R++ Sbjct: 57 FANVTEAAQATGATVSVIYVPPAGAAAAIWEAVEANLDLAICITEGIPVKDMLEVRNRMK 116 Query: 119 ------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TPD KIGIMPG I R G +G++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRAGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV+ F D T++++M+GEIGG E EAA++ K Sbjct: 177 IGLGQSSAVGIGGDPINGLKHIDVMRAFNDDPDTDAVIMIGEIGGPDEAEAAEWCKANM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+ G + +P+ + + Sbjct: 236 ---KKPIVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEACGFTVTRNPSEMAKL 292 Query: 293 LVELLG 298 L LL Sbjct: 293 LKALLK 298 >gi|328884533|emb|CCA57772.1| Succinyl-CoA ligase [Streptomyces venezuelae ATCC 10712] Length = 294 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 142/300 (47%), Positives = 196/300 (65%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT+ +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGATGMKHTK-LMLGDGTNIVGGVNPRKAGTTVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA + T AN SV++VPP+ A A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 SVAEAMKETGANVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAYAQAK 119 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA F+K KP Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P + +L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAKLARAILA 293 >gi|330918877|ref|XP_003298377.1| hypothetical protein PTT_09097 [Pyrenophora teres f. teres 0-1] gi|311328415|gb|EFQ93517.1| hypothetical protein PTT_09097 [Pyrenophora teres f. teres 0-1] Length = 328 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 169/297 (56%), Positives = 219/297 (73%), Gaps = 8/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKVL QG TGK GTFH +QAI Y T+VVGG +PKK T G +PVF + Sbjct: 33 NLRINGDTKVLFQGFTGKQGTFHAQQAIEY-GTKVVGGTNPKKAGTQHLG----LPVFKS 87 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VA+A + T A+A+ I+VPP A +I E+I AE+PLIV ITEGIP DMVR+ L+ ++ Sbjct: 88 VADAIKETQASATAIFVPPPVAAASIEEAIAAEVPLIVTITEGIPQHDMVRITDMLKSQN 147 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR++GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 148 KSRMVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 207 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL D+ T+ I+M+GEIGGSAEE+AA FLK+ KP+V Sbjct: 208 VGIGGDPFSGTNFIDCLKVFLEDQETDGIIMIGEIGGSAEEDAADFLKEYNTA--NKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APPGR MGHAGA++SGGKG A KI A++ AG+ + SPA++G +L + Sbjct: 266 SFIAGISAPPGRRMGHAGAIVSGGKGDANSKITALEAAGVTVERSPAKLGSTLYDQF 322 >gi|15790523|ref|NP_280347.1| hypothetical protein VNG1542G [Halobacterium sp. NRC-1] gi|169236261|ref|YP_001689461.1| succinate--CoA ligase (ADP-forming) alpha subunit [Halobacterium salinarum R1] gi|10581029|gb|AAG19827.1| succinyl-CoA synthetase alpha chain [Halobacterium sp. NRC-1] gi|167727327|emb|CAP14113.1| succinate--CoA ligase (ADP-forming) alpha subunit [Halobacterium salinarum R1] Length = 289 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 151/298 (50%), Positives = 205/298 (68%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD +T+V+VQG+TG G FH EQ I Y V G + P KG G VPV+ Sbjct: 1 MSILVDDDTRVVVQGITGGEGKFHAEQMIEYGTNVVAGAV-PGKGGQEVAG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A A+ASV+ VPP+ A DA+ E+++ + L+V ITEGIP DM +V RL + Sbjct: 56 TVNQAVVAENADASVVLVPPAFAADAVFEALDTPLDLVVAITEGIPSQDMAKVYKRLSEV 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+TP K+GI+PG+IF G+VG++SRSGTLTY+ V + G+GQ+TA Sbjct: 116 DTRLLGPNCPGIITPGEAKLGILPGNIFEAGNVGLVSRSGTLTYQVVDSLTARGVGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT+FID LELF AD TE++VM GEIGG EE AA ++ + P+ Sbjct: 176 IGIGGDPIIGTDFIDALELFEADPETEAVVMCGEIGGEDEEAAAAYIDEHM----DTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G A+ KI+A+ +AG+ + +P + + ELL Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTADSKISALNDAGVPVGDTPEEVADDIEELL 289 >gi|167041902|gb|ABZ06641.1| putative CoA-binding domain protein [uncultured marine microorganism HF4000_133I24] Length = 297 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 135/301 (44%), Positives = 193/301 (64%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D T ++VQG TGK G+FH E+ I Y T +VGG+ P KG G +PVF Sbjct: 1 MSILIDNKTNIIVQGFTGKFGSFHAEEMIKY-GTNIVGGVTPGKGGQTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ++T A AS+++VPP A D+ +E+ +A I V IT+GIP DM+++K + + Sbjct: 56 TVKDAVKKTGATASILFVPPEFAADSAMEAADAGIKTCVAITDGIPSHDMIKIKRYMRRY 115 Query: 121 ----SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 LIGPNC GI++P +GIMPG I+ +G VG++ RSGTL YEA Q +G Sbjct: 116 SKKDKMTLIGPNCAGIISPGKALLGIMPGHIYMQGKVGVIGRSGTLGYEAAQQMKNLNIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G F D+LE F D+ T++I+M+GEIGG E A +F K+ Sbjct: 176 ISTSVGIGGDPINGCSFRDILEKFEQDDQTKAILMIGEIGGPQEVAAGKFAKENMS---- 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V ++AG TAP GR MGHAGA++S A +K+ +KE G+ I+ +P+ +G ++ + Sbjct: 232 KPVVAYIAGLTAPIGRVMGHAGAIVSAYGESAVEKVELLKECGVTISKNPSVMGETVKSV 291 Query: 297 L 297 L Sbjct: 292 L 292 >gi|156778115|gb|ABU95432.1| Scs alpha [Sawyeria marylandensis] Length = 307 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 166/294 (56%), Positives = 219/294 (74%), Gaps = 9/294 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 +L++K+TKV+ QG+TG G+FH++Q I Y T++VGG++PKK G +P+F V Sbjct: 21 VLINKDTKVICQGITGNQGSFHSQQMINY-GTKMVGGVNPKKVGEKHLG----LPIFKDV 75 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSS 121 +A + T +AS+++VPP AI+E IEAEIPLIVCITEGIP DMV+V + L+ + Sbjct: 76 RQAVKETGCHASMVFVPPPAGAAAIMEGIEAEIPLIVCITEGIPQHDMVKVVSALKTQKK 135 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RL+GPNCPG++ P+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+ GLGQST V Sbjct: 136 TRLVGPNCPGVIKPNECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVSQTTAAGLGQSTVV 195 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FIDVL++FL D TE I+M+GEIGG AEE AA FL KKP+VG Sbjct: 196 GIGGDPFNGTNFIDVLDMFLHDPETEGIIMIGEIGGQAEEMAAHFLD---ISPIKKPVVG 252 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 F+AG TAPPGR MGHAGAVISGG G A+ + AM++ GI ++ +PA++G ++V+ Sbjct: 253 FIAGVTAPPGRRMGHAGAVISGGNGDAKSIMAAMEKVGIRMSATPAKMGTTMVQ 306 >gi|186470718|ref|YP_001862036.1| succinyl-CoA synthetase, alpha subunit [Burkholderia phymatum STM815] gi|184197027|gb|ACC74990.1| succinyl-CoA synthetase, alpha subunit [Burkholderia phymatum STM815] Length = 301 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 141/303 (46%), Positives = 202/303 (66%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T+V+VQG TG +FH ++ I Y T VVGG+ P KG + + PVF Sbjct: 1 MSILIDETTRVIVQGFTGDKASFHAKEMIAY-GTNVVGGVTPGKGGKHH----LERPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 TV +A T A AS+++VPP DAI+E+ +A + L+ IT+GIP DM+RVK L Sbjct: 56 TVKDAARETGATASLVFVPPPYCADAIMEAADAGLKLVCVITDGIPAQDMMRVKRYLLRY 115 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 +++ + ++GPNC GI++ +GIMPG I+R+G++GI+SRSGTL YEA Q + GLG Sbjct: 116 PKEARTMVVGPNCAGIISAGRAMLGIMPGHIYRRGNIGIVSRSGTLGYEAAAQLNALGLG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 +T+VGIGGDP+ G+ F+D L+LF D TE++VM+GEIGG E EAA+++ + Sbjct: 176 VTTSVGIGGDPINGSSFLDHLKLFEQDPDTEAVVMIGEIGGPQEAEAARWVSEHM----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VG+VAG TAP GR MGHAGA+IS A +K M+ G+ +APS + +G ++ + Sbjct: 232 KPVVGYVAGLTAPKGRRMGHAGAIISAAGDSAAEKAQIMQSYGLSVAPSASELGATVASV 291 Query: 297 LGS 299 L S Sbjct: 292 LES 294 >gi|82702209|ref|YP_411775.1| succinyl-CoA synthetase subunit alpha [Nitrosospira multiformis ATCC 25196] gi|82410274|gb|ABB74383.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nitrosospira multiformis ATCC 25196] Length = 295 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 140/304 (46%), Positives = 194/304 (63%), Gaps = 13/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+D+NT+++VQG TGK GTFH + I Y + +VGG+ P KG G PVF Sbjct: 1 MAILIDENTRIIVQGFTGKIGTFHAQDMINY-GSNIVGGVTPGKGGQQHLGR----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA ++ ANAS+++VPP+ A D+I+E+ +A I V IT+GIP DM+ VK L + Sbjct: 56 TVKEAVQQVGANASIVFVPPAFAADSIMEAADAGIKYCVAITDGIPTQDMMTVKNFLRRF 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L GPNC G ++P +GIMPG I+ G VG++ RSGTL YEA Q G+G Sbjct: 116 PIEERMVLTGPNCAGTISPGRAMLGIMPGHIYMAGDVGVVGRSGTLGYEAADQMRTLGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ D+LE F D T+ +VM+GEIGG E EA F +D Sbjct: 176 ISTSVGIGGDPIIGSSHRDILERFEEDPETKVVVMIGEIGGPQEVEAGIFSRDYMS---- 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V ++AG TAP GR MGHAGA+IS A +K+ +KE G+ I+P+P+ IG ++ ++ Sbjct: 232 KPLVAYIAGLTAPEGRRMGHAGAIISAAGESAAEKVAILKELGVTISPTPSAIGETVAKV 291 Query: 297 LGSL 300 L + Sbjct: 292 LAKM 295 >gi|323357165|ref|YP_004223561.1| succinyl-CoA synthetase, alpha subunit [Microbacterium testaceum StLB037] gi|323273536|dbj|BAJ73681.1| succinyl-CoA synthetase, alpha subunit [Microbacterium testaceum StLB037] Length = 300 Score = 279 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 146/307 (47%), Positives = 205/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQVVGG++ +K T T G +V Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHTA-LMLKAGTQVVGGVNARKAGTTVTHKDASGNDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +V EA T A+ S+ +VPP+ DA++E+I+AEIPL+V ITEG+PV D A Sbjct: 60 LPVFASVEEAMRETGADVSIAFVPPAFTKDAMVEAIDAEIPLLVVITEGVPVGDTAEAWA 119 Query: 116 RLEKSS--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +F+ Sbjct: 120 YAKSKGEKTRIIGPNCPGIITPGEALVGITPANITGKGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID L F AD T++IVM+GEIGG AEE AA ++ + Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDALAAFEADPETKAIVMIGEIGGDAEERAAAYIAENV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETASLM 293 Query: 294 VELLGSL 300 E++ +L Sbjct: 294 REIIEAL 300 >gi|302345487|ref|YP_003813840.1| succinate-CoA ligase (ADP-forming), alpha subunit [Prevotella melaninogenica ATCC 25845] gi|302149358|gb|ADK95620.1| succinate-CoA ligase (ADP-forming), alpha subunit [Prevotella melaninogenica ATCC 25845] Length = 290 Score = 279 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 142/299 (47%), Positives = 199/299 (66%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+TK++VQG+TG+ G+FH + Y T VVGG P K G +PVF Sbjct: 1 MSILINKDTKLIVQGITGRDGSFHASKMKEY-GTNVVGGTSPGKAGQEVCG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A T ANAS+I+VP A DA++E+I+ + L++CITEG+P LD V + + Sbjct: 56 TVKDAVAATGANASIIFVPAPFAKDAMLEAIDGGVELVICITEGVPTLDAVAAQRYAKIK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPG+++P+ GIMP +IF+KG G++SRSGTLTYE V+ +Q GLGQSTA Sbjct: 116 GVKVIGPNCPGLISPEESMAGIMPTNIFKKGHTGVISRSGTLTYEVVYNLTQAGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDPV G F ++L +F D T+SI ++GEIGG AEE AA+F+K+ KP+ Sbjct: 176 VGVGGDPVVGLYFEELLRMFQDDPETDSIALIGEIGGDAEERAAKFIKEHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F++G+ APPG+ MGHAGA+IS G G A +KI A + G+ +A + I L + L Sbjct: 232 VFISGQQAPPGKQMGHAGAIISSGSGSASEKIAAFEAVGVPVARETSEIPELLKKQLKK 290 >gi|261402514|ref|YP_003246738.1| succinyl-CoA synthetase, alpha subunit [Methanocaldococcus vulcanius M7] gi|261369507|gb|ACX72256.1| succinyl-CoA synthetase, alpha subunit [Methanocaldococcus vulcanius M7] Length = 287 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 145/296 (48%), Positives = 206/296 (69%), Gaps = 10/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NT+ +VQG+TGK G+FHT++ +L C T++VGGI P KG G VPVF TV Sbjct: 2 ILLDENTRAVVQGITGKQGSFHTKK-MLECGTKIVGGITPGKGGKDVYG----VPVFDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA ++T ANASVI+VP A DA+ E+++A + LIV ITE IPV D + E Sbjct: 57 KEAVKKTDANASVIFVPAPFAKDAVFEAMDAGLDLIVVITEHIPVHDTMEFVNYAEDLGI 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++IGPN PGI +P K+GI+P + ++G++G++SRSGTLTYE Q G G ST VG Sbjct: 117 KIIGPNTPGIASPKVGKLGIIPMEVLKEGNIGMVSRSGTLTYEIANQIKNAGFGVSTCVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDP+ G + ++L+LF D+ TE+IVM+GEIGG AEEEA++F+K KKP++G+ Sbjct: 177 IGGDPIVGLRYGEILDLFEKDKETEAIVMIGEIGGGAEEEASKFIK-----KMKKPVIGY 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +AG++AP G+ MGHAGA++ G+G AE K+ A++EAG +A + + I + L E+L Sbjct: 232 IAGQSAPEGKRMGHAGAIVEKGRGTAESKMRALEEAGAYVAKNISDIPKILKEILK 287 >gi|152967941|ref|YP_001363725.1| succinyl-CoA synthetase subunit alpha [Kineococcus radiotolerans SRS30216] gi|151362458|gb|ABS05461.1| succinyl-CoA synthetase, alpha subunit [Kineococcus radiotolerans SRS30216] Length = 299 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 144/306 (47%), Positives = 199/306 (65%), Gaps = 13/306 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++ ++KVLVQG+TG G HT Q +L TQVVGG+ P KG G V Sbjct: 1 MSIFINSDSKVLVQGMTGSEGRKHT-QRMLTSGTQVVGGVTPGKGGQSVEFTGADGSPVQ 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF++V EA+E T A+ SVI+VP A++E++EA PL+V ITEG+PV D A Sbjct: 60 VPVFSSVGEAREATGADVSVIFVPAKFTKGAVVEAVEAATPLVVVITEGVPVADSAEFYA 119 Query: 116 RLEKSSS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 KS + RLIGPNCPG+++P +GI+P I G +G++S+SGTLTY+ +++ Sbjct: 120 LAAKSGTTRLIGPNCPGLISPGKSNVGIIPADITPPGRIGLVSKSGTLTYQMMYELRD-- 177 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G S+AVGIGGDPV GT ID L+ F D T+ IVM+GEIGG AEE AA+F++ Sbjct: 178 IGFSSAVGIGGDPVIGTTHIDALQAFQDDPETDVIVMIGEIGGDAEERAAKFIEANV--- 234 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K +A++ AG+ + +P+ Sbjct: 235 -TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKDALEAAGVKVGKTPSETAALAR 293 Query: 295 ELLGSL 300 E+ +L Sbjct: 294 EIFQAL 299 >gi|163839117|ref|YP_001623522.1| succinyl-CoA synthetase subunit alpha [Renibacterium salmoninarum ATCC 33209] gi|162952593|gb|ABY22108.1| succinyl-CoA synthetase alpha chain [Renibacterium salmoninarum ATCC 33209] Length = 305 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 150/312 (48%), Positives = 205/312 (65%), Gaps = 19/312 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT IL TQVVGG++ +K T + G V Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHTA-LILKAGTQVVGGVNARKAGTTVSHTDAAGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF V EA E+T A+ S+I+VPP+ DA++E+IEA I L+V ITEG+PV D A Sbjct: 60 LPVFGGVTEAIEKTGADVSIIFVPPAFTKDAVVEAIEAGIGLVVIITEGVPVQDSAEFWA 119 Query: 116 RLE-------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + K +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ ++ Sbjct: 120 LAQSKVDADGKQVTRIIGPNCPGIITPGESLVGITPNNITSKGPIGLVSKSGTLTYQMMY 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + LG STA+GIGGDPV GT ID L F AD T++IVM+GEIGG AEE AA F+K Sbjct: 180 ELRD--LGFSTAIGIGGDPVIGTTHIDALAAFEADPETKAIVMIGEIGGDAEERAADFIK 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 238 ANV----TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSE 293 Query: 289 IGRSLVELLGSL 300 + L E+ +L Sbjct: 294 SAKLLREVFAAL 305 >gi|170291006|ref|YP_001737822.1| succinyl-CoA synthetase, alpha subunit [Candidatus Korarchaeum cryptofilum OPF8] gi|170175086|gb|ACB08139.1| succinyl-CoA synthetase, alpha subunit [Candidatus Korarchaeum cryptofilum OPF8] Length = 291 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 143/298 (47%), Positives = 193/298 (64%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV + +VLVQG+TG+ GT HT+ + Y T++V G+ P K +VPVF Sbjct: 1 MAILVREGMRVLVQGITGRQGTIHTKLMLEY-GTKIVAGVTPGKSGAKV----YDVPVFD 55 Query: 61 TVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA E+ +AS+++VP A DA+IE+++ IPL+V ITEGIPV D + + Sbjct: 56 SVEEAVREKGPIDASIVFVPAPYAMDAVIEAVDNAIPLVVVITEGIPVHDTAKFVSYARS 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +IGPNCPGI+ P KIGIMP F G VGI+SRSGTLTYE G G ST Sbjct: 116 MGTTIIGPNCPGIIAPGKVKIGIMPADSFAPGPVGIVSRSGTLTYEISLSLKNAGYGSST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G FI+VLELF D T+++V+VGEIGG AEE AA+++ +G KP+ Sbjct: 176 TIGIGGDPITGLNFIEVLELFKEDPETKAVVIVGEIGGDAEERAAKYI----AQGYPKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V +VAG+TAPPG+ MGHAGA+I+ G+G E K A EAG+ +A +P + L E L Sbjct: 232 VAYVAGRTAPPGKRMGHAGAIITAGQGTVESKERAFSEAGVPVARTPFEVAPLLAERL 289 >gi|222480618|ref|YP_002566855.1| succinyl-CoA synthetase, alpha subunit [Halorubrum lacusprofundi ATCC 49239] gi|222453520|gb|ACM57785.1| succinyl-CoA synthetase, alpha subunit [Halorubrum lacusprofundi ATCC 49239] Length = 289 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 153/298 (51%), Positives = 206/298 (69%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI VD +T+V+VQG+TG G FH Q I Y V G + P KG G VPV+ Sbjct: 1 MSIFVDDDTRVVVQGITGGEGKFHAGQMIEYGTNVVAGAV-PGKGGQEVEG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E A+ASVI+VPP+ A DAI ES++ ++ L V ITEGIP DM +V RL + Sbjct: 56 TVDEAVEAENADASVIFVPPAFAADAIFESLDTDLDLAVAITEGIPTQDMAKVNKRLSEV 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TP K+GI+PG+IF G+VG++SRSGTLTY+ V ++ GLGQSTA Sbjct: 116 DTRLIGPNCPGIITPGEAKLGILPGNIFSDGNVGLVSRSGTLTYQVVDNLTERGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+ F AD+ T+++VM GEIGG EE+AA+F+ + P+ Sbjct: 176 IGIGGDPIIGTSFIDALDAFEADDDTDAVVMCGEIGGEDEEQAARFIGEHM----DTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G A+ KI+A+ +AG+ + +P + + + L Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAQSKIDALNDAGVPVGDTPEEVADHVEDFL 289 >gi|76802811|ref|YP_330906.1| succinate--CoA ligase (ADP-forming), alpha subunit [Natronomonas pharaonis DSM 2160] gi|76558676|emb|CAI50268.1| succinate--CoA ligase (ADP-forming), alpha subunit [Natronomonas pharaonis DSM 2160] Length = 289 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 148/298 (49%), Positives = 207/298 (69%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD +T+V+VQG+TG G FHT Q + Y V G + P +G G VPV+ Sbjct: 1 MSILVDNDTRVVVQGITGGEGKFHTGQMLEYGTNVVAGAV-PGRGGQEVEG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ANA+V++VPP+ A DA+ E++++ + L+V ITEGIP DM +V +L ++ Sbjct: 56 TVHKAAREEDANAAVVFVPPAFAADALFEALDSPVDLVVAITEGIPQQDMAKVYRKLRET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPNCPG++TP K+GI+PG+IF +G+VG++SRSGTLTY+ V +Q G+GQ+TA Sbjct: 116 DTNLIGPNCPGLITPGEAKLGILPGNIFAEGNVGLVSRSGTLTYQVVDSLTQRGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT+F+D LE+F D TE++VM GEIGG EEEAA+F+ P+ Sbjct: 176 VGIGGDPIIGTDFVDALEMFENDPDTEAVVMCGEIGGEDEEEAAEFIGANM----DTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G AE KINA+ AG+ + +P + ++ L Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAESKINALNNAGVPVGDTPEEVADNIESFL 289 >gi|188581005|ref|YP_001924450.1| succinyl-CoA synthetase subunit alpha [Methylobacterium populi BJ001] gi|179344503|gb|ACB79915.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium populi BJ001] Length = 296 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 143/303 (47%), Positives = 196/303 (64%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T +LVQG+TG GTFH ++ I Y + VVGG+ P KG G VPVF Sbjct: 1 MSILIDEKTPILVQGITGDKGTFHAKEMIAY-GSNVVGGVTPGKGGKTHCG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E T A S+ +V P A DAI+E+ +A + L+ IT+GIP DM+RVK L + Sbjct: 56 TVKEAVEATGATTSITFVAPPFAADAIMEAADAGLRLVCSITDGIPAQDMMRVKRYLRRY 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + ++GPNC GI++P +GIMPG I+ G VG++SRSGTL YEA Q + G+G Sbjct: 116 PKEKRTMVVGPNCAGIISPGKSMLGIMPGHIYLPGKVGVISRSGTLGYEAAAQMKELGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L LF D TE+++M+GEIGG E EA+ ++K+ Sbjct: 176 ISTSVGIGGDPINGSSFLDHLALFEQDPETEAVLMIGEIGGPQEAEASAWIKEN----FS 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++GFVAG TAP GR MGHAGA+IS A +K M+ G+ +AP P G+++ ++ Sbjct: 232 KPVIGFVAGLTAPKGRRMGHAGAIISATGDSAAEKAEIMRSYGLTVAPDPGSFGQTVADV 291 Query: 297 LGS 299 L Sbjct: 292 LAR 294 >gi|239979920|ref|ZP_04702444.1| succinyl-CoA synthetase subunit alpha [Streptomyces albus J1074] gi|291451775|ref|ZP_06591165.1| succinyl-CoA synthetase subunit alpha [Streptomyces albus J1074] gi|291354724|gb|EFE81626.1| succinyl-CoA synthetase subunit alpha [Streptomyces albus J1074] Length = 294 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 141/300 (47%), Positives = 195/300 (65%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT+ +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGATGMKHTK-LMLGDGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 +VAEA E+T A+ SVI+VPP A A++E+I+AEI L V ITEGI V D A + Sbjct: 60 SVAEAIEKTGADVSVIFVPPKFAKAAVVEAIDAEIGLAVVITEGIAVHDSAAFWAYASSK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA ++K KP Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPETDLIVMIGEIGGDAEERAADYIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P +L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAELARAILA 293 >gi|215426223|ref|ZP_03424142.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis T92] gi|215429811|ref|ZP_03427730.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis EAS054] gi|260185852|ref|ZP_05763326.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis CPHL_A] gi|260204158|ref|ZP_05771649.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis K85] Length = 300 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 149/307 (48%), Positives = 201/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKTNVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILLSL 300 >gi|294814561|ref|ZP_06773204.1| Succinyl-CoA ligase ADP-forming subunit alpha [Streptomyces clavuligerus ATCC 27064] gi|326442951|ref|ZP_08217685.1| succinyl-CoA synthetase subunit alpha [Streptomyces clavuligerus ATCC 27064] gi|294327160|gb|EFG08803.1| Succinyl-CoA ligase ADP-forming subunit alpha [Streptomyces clavuligerus ATCC 27064] Length = 294 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 142/300 (47%), Positives = 197/300 (65%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT+ +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGATGMKHTK-LMLGDGTNIVGGVNPRKAGTTVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TVAEA E+T A+ SV++VPP+ A A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 TVAEAMEKTGADVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAHAVSK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G + Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGKIGLVSKSGTLTYQMMYELRD--IGFT 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + VGIGGDPV GT ID L F AD TE IVM+GEIGG AEE AA F+K KP Sbjct: 178 SCVGIGGDPVVGTTHIDALAAFEADPETELIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P + +L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVQVGKTPTETAKLARAILA 293 >gi|254466505|ref|ZP_05079916.1| succinyl-CoA synthase, alpha subunit [Rhodobacterales bacterium Y4I] gi|206687413|gb|EDZ47895.1| succinyl-CoA synthase, alpha subunit [Rhodobacterales bacterium Y4I] Length = 297 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 146/303 (48%), Positives = 194/303 (64%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+++KV+VQG+TGK FHT+ I Y V G + K G T VPVF Sbjct: 1 MSILLDRDSKVIVQGITGKIARFHTKDMIEYGTNVVGGVVPGKGGETVEG-----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 TV EA E T ANAS+++VPP A D+I+E+ +A I VCIT+GIP DM+RVK + Sbjct: 56 TVKEAVEATGANASLVFVPPPFAADSIMEAADAGIKYCVCITDGIPAQDMIRVKRYMYRY 115 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + L GPNC G ++P +GIMPG I+ G+VGI+ RSGTL YEA Q + GLG Sbjct: 116 PKDKRMILTGPNCAGTISPGKALLGIMPGHIYLPGTVGIIGRSGTLGYEAAAQLKELGLG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+LE F D TE I M+GEIGG E EAA++++D Sbjct: 176 VSTSVGIGGDPINGSSFKDILEWFEKDPETEVIAMIGEIGGPQEAEAAEYIRDHV----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V +VAG TAP GRTMGHAGA+IS A +K+ + AG+ +A +PA IG ++ + Sbjct: 232 KPVVAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILSAAGVTVAENPAVIGETIASV 291 Query: 297 LGS 299 + Sbjct: 292 MKK 294 >gi|31792141|ref|NP_854634.1| succinyl-CoA synthetase subunit alpha [Mycobacterium bovis AF2122/97] gi|121636877|ref|YP_977100.1| succinyl-CoA synthetase subunit alpha [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989348|ref|YP_002644035.1| succinyl-CoA synthetase subunit alpha [Mycobacterium bovis BCG str. Tokyo 172] gi|289446524|ref|ZP_06436268.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis CPHL_A] gi|289573582|ref|ZP_06453809.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis K85] gi|289749476|ref|ZP_06508854.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis T92] gi|289753008|ref|ZP_06512386.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis EAS054] gi|77417495|sp|Q7U0Z0|SUCD_MYCBO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|31617729|emb|CAD93838.1| PROBABLE SUCCINYL-COA SYNTHETASE (ALPHA CHAIN) SUCD (SCS-ALPHA) [Mycobacterium bovis AF2122/97] gi|121492524|emb|CAL70992.1| Probable succinyl-CoA synthetase (alpha chain) sucD [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772461|dbj|BAH25267.1| succinyl-CoA synthetase subunit alpha [Mycobacterium bovis BCG str. Tokyo 172] gi|289419482|gb|EFD16683.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis CPHL_A] gi|289538013|gb|EFD42591.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis K85] gi|289690063|gb|EFD57492.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis T92] gi|289693595|gb|EFD61024.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis EAS054] Length = 303 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 149/307 (48%), Positives = 201/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKTNVS- 239 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 240 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALA 296 Query: 294 VELLGSL 300 E+L SL Sbjct: 297 REILLSL 303 >gi|167967814|ref|ZP_02550091.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis H37Ra] gi|215410540|ref|ZP_03419348.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis 94_M4241A] gi|294996437|ref|ZP_06802128.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis 210] gi|297633474|ref|ZP_06951254.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis KZN 4207] gi|297730459|ref|ZP_06959577.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis KZN R506] gi|313657787|ref|ZP_07814667.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis KZN V2475] Length = 300 Score = 278 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 149/307 (48%), Positives = 201/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILLSL 300 >gi|124268440|ref|YP_001022444.1| succinyl-CoA synthetase subunit alpha [Methylibium petroleiphilum PM1] gi|124261215|gb|ABM96209.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methylibium petroleiphilum PM1] Length = 296 Score = 278 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 138/301 (45%), Positives = 197/301 (65%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T V+VQG TG TFH ++ I Y T VVGG+ P KG + PVF Sbjct: 1 MSILIDEKTPVIVQGFTGDKATFHAKEMIAY-GTNVVGGVTPGKGGQRH----LERPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA T A AS+++VPP A DA++E+ +A + L+ IT+GIP DM+RVK L + Sbjct: 56 TVKEAVRDTGAEASLLFVPPPFAADALMEAADAGLKLVCIITDGIPAQDMMRVKRYLRRY 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + ++GPNC GI++ +GIMPG+I+++G+VGI+SRSGTL YEA Q G+G Sbjct: 116 AKEQRTTIVGPNCAGIISAGKAMLGIMPGNIYQRGNVGIVSRSGTLGYEAAAQMKALGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 +T+VGIGGDP+ G+ F+D LE F D T++++M+GEIGG E EA+ +++ Sbjct: 176 VTTSVGIGGDPINGSSFLDHLERFEQDPETKAVIMIGEIGGPQEAEASAWVQAHMS---- 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VG+VAG TAP GR MGHAGA+IS A +K M+ G+ ++PS A +G+++ + Sbjct: 232 KPVVGYVAGLTAPKGRRMGHAGAIISAVGDTAAEKAEIMRSYGLLVSPSAAELGKTVAQA 291 Query: 297 L 297 L Sbjct: 292 L 292 >gi|292656586|ref|YP_003536483.1| succinyl-CoA synthase subunit alpha [Haloferax volcanii DS2] gi|291372295|gb|ADE04522.1| succinyl-CoA synthase, alpha subunit [Haloferax volcanii DS2] Length = 289 Score = 278 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 148/298 (49%), Positives = 208/298 (69%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI VD +T+V+VQG+TG G FHT Q + Y T VV G P KG G +PV+ Sbjct: 1 MSIFVDDDTRVVVQGITGGEGKFHTRQMVEY-GTNVVAGTSPGKGGQDVDG----IPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + ANASV++VPP+ AGDAI E+++ ++ L+V ITEG+P DM +V RL ++ Sbjct: 56 TVEEAVDEEDANASVVFVPPAFAGDAIFEALDTDLDLVVAITEGVPTQDMAKVNKRLSET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TP K+GI+PG+IF +G+VG++SRSGTLTY+ V ++ G+GQ+TA Sbjct: 116 DTRLIGPNCPGIITPGEAKLGILPGNIFEEGNVGLVSRSGTLTYQVVSNLTERGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT F+D LE F D T ++VM GEIGG EE+AA+++ + P+ Sbjct: 176 IGIGGDPIIGTSFVDALEAFENDPDTHAVVMCGEIGGEDEEQAAKYIAENM----DTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G AE KI+A+ +A + + +P + + + L Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAESKISALNDASVPVGDTPNEVADHIEDFL 289 >gi|218677907|ref|ZP_03525804.1| succinyl-CoA synthetase subunit alpha [Rhizobium etli CIAT 894] Length = 247 Score = 278 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 196/247 (79%), Positives = 224/247 (90%), Gaps = 1/247 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSILV+K+TK+LVQGLTGK GTFHTEQA+ Y TQ+VGGIHPKKG WTG ++P+F Sbjct: 1 MSILVNKDTKILVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGENWTGAKGESLPIF 60 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAE KE+T ANASVIYVPP+GA DAIIE+I+AEIP I CITEGIPV+DMVRVKARL++ Sbjct: 61 ATVAEGKEKTGANASVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR 120 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S SRL+GPNCPGI+TP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAVFQTS EGLGQ+T Sbjct: 121 SKSRLLGPNCPGIMTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT 180 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPVKGTEFIDVLE+FLADEAT SI+M+GEIGGSAEE+AAQFL DEAK+GRKKP+ Sbjct: 181 AVGIGGDPVKGTEFIDVLEMFLADEATTSIIMIGEIGGSAEEDAAQFLIDEAKKGRKKPM 240 Query: 240 VGFVAGK 246 GF+AG+ Sbjct: 241 AGFIAGR 247 >gi|289617630|emb|CBI61353.1| unnamed protein product [Sordaria macrospora] Length = 324 Score = 278 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 150/296 (50%), Positives = 197/296 (66%), Gaps = 13/296 (4%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH + AI Y T+VVGG +PKK ++ PVF Sbjct: 36 NLKINSDTKVIFQGFTGKQGTFHAQGAIEY-GTKVVGGTNPKKAGQTH----LDRPVFKN 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V+EA + T A A+ I+VPP A I E++ AEIP L R + +S Sbjct: 91 VSEAVKETGATATAIFVPPPLAAAGIEEALNAEIPPRR--------LHYRRHPSAWTQSK 142 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RL+GPNCPGI+ P CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 143 TRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLVV 202 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID L++FL D T+ I+M+GEIGGSAEEEAA FLK+ + KP+V Sbjct: 203 GIGGDPFSGTNFIDCLKVFLEDGETDGIIMIGEIGGSAEEEAADFLKEYNTKNGGKPVVS 262 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APP G AGA+++GGKG A KI A++ AG+ + SPA +G++L E Sbjct: 263 FIAGISAPPWPPHGPAGAIVAGGKGDANSKIKALEAAGVVVERSPANLGKALREEF 318 >gi|229821497|ref|YP_002883023.1| succinyl-CoA synthetase, alpha subunit [Beutenbergia cavernae DSM 12333] gi|229567410|gb|ACQ81261.1| succinyl-CoA synthetase, alpha subunit [Beutenbergia cavernae DSM 12333] Length = 296 Score = 278 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 146/303 (48%), Positives = 199/303 (65%), Gaps = 12/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 M+I +D ++ V+VQG+TG GT HT + +L T +VGG++P+K T GG V+ Sbjct: 1 MAIFIDASSTVIVQGMTGSEGTKHTTR-MLASGTNIVGGVNPRKAGQSQTFPAPDGGEVD 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF TVA+A T AN SVI+VPP+ A++E+IEA +PL+V ITEG+PV D Sbjct: 60 VPVFGTVADAVAATGANVSVIFVPPAFTKAAVVEAIEAGVPLVVIITEGVPVADTAEFFT 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 + RLIGPNCPG+++P +GI+P +I G VG++S+SGTLTY+ +++ Sbjct: 120 LAHERGVRLIGPNCPGVISPGLSNVGIIPANITGPGKVGLVSKSGTLTYQMMYELRD--F 177 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G STAVGIGGDPV GT ID L F AD TE+IVM+GEIGG AEE AA+F+K Sbjct: 178 GFSTAVGIGGDPVIGTTHIDALAAFEADPETEAIVMIGEIGGDAEERAAEFIKANV---- 233 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + Sbjct: 234 TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSETAELVRA 293 Query: 296 LLG 298 LL Sbjct: 294 LLS 296 >gi|68075515|ref|XP_679676.1| succinyl-CoA synthetase alpha subunit [Plasmodium berghei strain ANKA] gi|56500478|emb|CAI04443.1| succinyl-CoA synthetase alpha subunit, putative [Plasmodium berghei] Length = 294 Score = 278 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 157/290 (54%), Positives = 206/290 (71%), Gaps = 9/290 (3%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--GNVNVPVFTTVAEAKERTAANASVI 76 G+FHT +A+ Y T++VGG++P K + WT +PVF +V EAKE+T ASVI Sbjct: 5 FQGSFHTTEALKY-GTKMVGGVNPSKKGSTWTSIDNKYTLPVFGSVFEAKEKTNCYASVI 63 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK-SSSRLIGPNCPGILTP 135 YVP A +AIIESIE+EIPLIVCITEGI DM+ VKA L SRLIGPNCPGI+ P Sbjct: 64 YVPHQHAKNAIIESIESEIPLIVCITEGICQHDMLEVKACLNMSKKSRLIGPNCPGIIKP 123 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 KIGI+P I +KG VGI+SRSGTLTYE V QT++ GLGQST +GIGGDP GT FID Sbjct: 124 GESKIGILPSHIHKKGCVGIVSRSGTLTYEGVNQTTKVGLGQSTCIGIGGDPFHGTSFID 183 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-----KRGRKKPIVGFVAGKTAPP 250 L+LFL D+ T+ I+++GEIGG+AEE+ A++L + K+ +KK I F+AG+ APP Sbjct: 184 CLKLFLEDDETKCILLIGEIGGNAEEQVAEWLIENNVDDPEKKKKKKNIFAFIAGRCAPP 243 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 G+ MGHAGA+ISGGKG A+ KI A++ AG+ + +P +IG + ++ + Sbjct: 244 GKRMGHAGALISGGKGTADGKIEALRNAGVHVVINPTKIGEEIYNVMKDI 293 >gi|189219058|ref|YP_001939699.1| Succinyl-CoA synthetase, alpha subunit [Methylacidiphilum infernorum V4] gi|161075763|gb|ABX56629.1| succinyl-CoA synthetase subunit alpha [Methylacidiphilum infernorum V4] gi|189185916|gb|ACD83101.1| Succinyl-CoA synthetase, alpha subunit [Methylacidiphilum infernorum V4] Length = 299 Score = 278 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 142/297 (47%), Positives = 204/297 (68%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+ K +V VQG+TGK G+FH Y T++ G+ P KG + + +P+F Sbjct: 1 MAILLKKTDRVAVQGITGKYGSFHARLCREY-GTKITAGVTPGKGGGVF---DETIPLFD 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EAKE+T N S+I+VP A DAI+E++ ++ L++CITEGIP+LDM ++K ++ + Sbjct: 57 TLKEAKEKTGCNVSLIFVPAPFAVDAIMEAVSCQMDLVICITEGIPILDMAKIKRKIVQQ 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +L+GPNCPG++TP K GIMPG I + G VGI+SRSGTLTYEAV+Q ++ GLGQS+ Sbjct: 117 GIKLVGPNCPGVITPGESKAGIMPGYIHKPGKVGIVSRSGTLTYEAVWQITRLGLGQSSC 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ G +V+E+F D TE+++++GEIGG E+EAAQ++K+ KKP+ Sbjct: 177 VGIGGDPIHGLSLREVIEMFWEDPQTEAVLIIGEIGGGEEQEAAQWIKEN----PKKPVA 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 FVAG TAP G+ MGHAGA+I G G K+ A +EAGI + S + IG+ + E + Sbjct: 233 AFVAGLTAPLGKRMGHAGAIILGQSGTVAAKLEAFREAGIKVIHSVSEIGKGVGEAI 289 >gi|163851227|ref|YP_001639270.1| succinyl-CoA synthetase subunit alpha [Methylobacterium extorquens PA1] gi|218530095|ref|YP_002420911.1| succinyl-CoA synthetase subunit alpha [Methylobacterium chloromethanicum CM4] gi|240138380|ref|YP_002962852.1| Malate thiokinase, small subunit [Methylobacterium extorquens AM1] gi|254560926|ref|YP_003068021.1| malate thiokinase, small subunit [Methylobacterium extorquens DM4] gi|259016277|sp|P53595|MTKB_METEA RecName: Full=Malate--CoA ligase subunit alpha; AltName: Full=MTK-alpha; AltName: Full=Malate thiokinase; AltName: Full=Malyl-CoA synthetase gi|163662832|gb|ABY30199.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium extorquens PA1] gi|218522398|gb|ACK82983.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium chloromethanicum CM4] gi|240008349|gb|ACS39575.1| Malate thiokinase, small subunit [Methylobacterium extorquens AM1] gi|254268204|emb|CAX24130.1| Malate thiokinase, small subunit [Methylobacterium extorquens DM4] Length = 296 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 143/303 (47%), Positives = 195/303 (64%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T +LVQG+TG GTFH ++ I Y + VVGG+ P KG G VPVF Sbjct: 1 MSILIDEKTPILVQGITGDKGTFHAKEMIAY-GSNVVGGVTPGKGGKTHCG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E T A S+ +V P A DAI+E+ +A + L+ IT+GIP DM+RVK L + Sbjct: 56 TVKEAVEATGATTSITFVAPPFAADAIMEAADAGLKLVCSITDGIPAQDMMRVKRYLRRY 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + ++GPNC GI++P +GIMPG I+ G VG++SRSGTL YEA Q + G+G Sbjct: 116 PKEKRTMVVGPNCAGIISPGKSMLGIMPGHIYLPGKVGVISRSGTLGYEAAAQMKELGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L LF D TE+++M+GEIGG E EA+ ++K+ Sbjct: 176 ISTSVGIGGDPINGSSFLDHLALFEQDPETEAVLMIGEIGGPQEAEASAWIKEN----FS 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++GFVAG TAP GR MGHAGA+IS A +K M+ G+ +AP P G ++ ++ Sbjct: 232 KPVIGFVAGLTAPKGRRMGHAGAIISATGDSAAEKAEIMRSYGLTVAPDPGSFGSTVADV 291 Query: 297 LGS 299 L Sbjct: 292 LAR 294 >gi|312220828|emb|CBY00769.1| similar to succinyl-coa ligase subunit alpha [Leptosphaeria maculans] Length = 328 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 171/297 (57%), Positives = 219/297 (73%), Gaps = 8/297 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ TKVL QG TGK GTFH +QAI Y T+VVGG +PKK T ++++PVF Sbjct: 33 NLRINSETKVLFQGFTGKQGTFHAQQAIEY-GTKVVGGTNPKKAGT----QHLSLPVFKN 87 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + T A A+ I+VPP A +I E+I AE+PLIV ITEGIP DMVR+ L+ ++ Sbjct: 88 VAEAIKETQATATAIFVPPPVAAASIEEAIAAEVPLIVTITEGIPQHDMVRITDMLKSQN 147 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SR++GPNCPGI+ P CKIGIMPG I ++G VGI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 148 KSRMVGPNCPGIIAPGQCKIGIMPGFIHKRGRVGIVSRSGTLTYEAVNQTTQAGLGQSLV 207 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT FID L++FL DE T+ I+M+GEIGGSAEE+AA FLK+ KP+V Sbjct: 208 VGIGGDPFSGTNFIDCLKVFLQDEETDGIIMIGEIGGSAEEDAADFLKEYNTA--NKPVV 265 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AG +APPGR MGHAGA++SGGKG A KINA++ AG+ + SPA++G +L + Sbjct: 266 SFIAGISAPPGRRMGHAGAIVSGGKGDANSKINALEAAGVVVERSPAKLGSTLYDQF 322 >gi|145591734|ref|YP_001153736.1| succinyl-CoA synthetase, alpha subunit [Pyrobaculum arsenaticum DSM 13514] gi|145283502|gb|ABP51084.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Pyrobaculum arsenaticum DSM 13514] Length = 293 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 130/301 (43%), Positives = 188/301 (62%), Gaps = 10/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV NTKV+VQG+TG+ G+FHT++ + Y T+VV G+ P KG T G VPV+ Sbjct: 1 MTVLVGPNTKVVVQGITGREGSFHTQRMLEY-GTKVVAGVTPGKGGTTVHG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA R ANASVI+VP A +A++E+++A + L+V ITE IPV + +R Sbjct: 56 TVEEAVRRHGANASVIFVPARFAANAVLEAVDAGVELVVVITEHIPVHETLRAVNYARSR 115 Query: 121 SSRLIGPNCPGILTPD-SCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPG++ P K+GIMP +I++ G + ++SRSGTLTYE +Q + G G + Sbjct: 116 GVTVIGPNCPGLVAPPVRTKLGIMPNNIYQTPGKIAVVSRSGTLTYEISYQLVRAGFGIN 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 A+G+GGDPV G + + D E IV++GE+GG AEE A+ + KP Sbjct: 176 IAIGVGGDPVVGLDLAEAALRVAQDPDVEGIVVIGEVGGDAEERLAKMYAE---GAINKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG+TAPPG+ MGHAGA++ G G A+ KI A + GI +A +P + + + L Sbjct: 233 MVAYVAGRTAPPGKRMGHAGAIVMLGSGDAKSKIEAFRAVGIPVAETPFEVPQLMARQLK 292 Query: 299 S 299 Sbjct: 293 R 293 >gi|307330697|ref|ZP_07609835.1| succinyl-CoA synthetase, alpha subunit [Streptomyces violaceusniger Tu 4113] gi|306883676|gb|EFN14724.1| succinyl-CoA synthetase, alpha subunit [Streptomyces violaceusniger Tu 4113] Length = 294 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 134/290 (46%), Positives = 188/290 (64%), Gaps = 9/290 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KV+VQG+TG G HT + +L T +VGG++P+K T +PVF Sbjct: 1 MAIFLTKESKVIVQGMTGSEGQKHTRR-MLASGTNIVGGVNPRKAGTTVDFDGSEIPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 +V EA + T A+ +VI+VP A+IE+I+AEIPL V ITEGI V D A + Sbjct: 60 SVKEAVDATGADVTVIFVPEKFTKGAVIEAIDAEIPLAVVITEGIAVHDSANFWAYAGKK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPADITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + VGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA F+K KP Sbjct: 178 SCVGIGGDPIIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSE 283 >gi|225713784|gb|ACO12738.1| Succinyl-CoA ligase subunit alpha, mitochondrial precursor [Lepeophtheirus salmonis] Length = 294 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 156/269 (57%), Positives = 204/269 (75%), Gaps = 6/269 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++++ K++KV+ QG TGK GTFH++QAI Y T +VGG+ PKK G +PVF Sbjct: 29 MNMMLTKDSKVICQGFTGKQGTFHSQQAIDY-GTNMVGGVSPKKAGQTHLG----LPVFG 83 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA A+A+VIYVPP GA AI+E+I+AE+PLIVCITEG+P DMV+V +L+ Sbjct: 84 SVKEAMTEVKADATVIYVPPPGAAAAILEAIDAEVPLIVCITEGVPQHDMVKVIRKLKNQ 143 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S+LIGPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT+Q GLGQ+ Sbjct: 144 DKSKLIGPNCPGIIAPNKCKIGIMPGHIHQEGCIGVVSRSGTLTYEAVHQTTQVGLGQTL 203 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP GT FID L++FL D T+ I+M+GEIGG+AEE+AA +L++ +KP+ Sbjct: 204 CIGIGGDPFNGTNFIDCLDIFLKDPKTKGIIMIGEIGGAAEEKAADYLQEHNSGANQKPV 263 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 V F+AG TAPPGR MGHAGA+ISGGKG A Sbjct: 264 VSFIAGVTAPPGRRMGHAGAIISGGKGTA 292 >gi|15608092|ref|NP_215467.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis H37Rv] gi|15840376|ref|NP_335413.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis CDC1551] gi|148660731|ref|YP_001282254.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis H37Ra] gi|148822161|ref|YP_001286915.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis F11] gi|253800021|ref|YP_003033022.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis KZN 1435] gi|254363878|ref|ZP_04979924.1| succinyl-CoA synthetase (alpha chain) sucD [Mycobacterium tuberculosis str. Haarlem] gi|289555267|ref|ZP_06444477.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis KZN 605] gi|298524443|ref|ZP_07011852.1| succinyl-CoA synthetase, alpha subunit [Mycobacterium tuberculosis 94_M4241A] gi|308231677|ref|ZP_07413419.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu001] gi|308370119|ref|ZP_07420341.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu002] gi|308370544|ref|ZP_07421953.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu003] gi|308371807|ref|ZP_07426317.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu004] gi|308372977|ref|ZP_07430634.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu005] gi|308374142|ref|ZP_07435033.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu006] gi|308375298|ref|ZP_07443466.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu007] gi|308376559|ref|ZP_07439286.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu008] gi|308377557|ref|ZP_07479657.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu009] gi|308378769|ref|ZP_07483850.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu010] gi|308379913|ref|ZP_07488086.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu011] gi|308397513|ref|ZP_07492587.2| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu012] gi|2829505|sp|P71558|SUCD_MYCTU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|1524210|emb|CAB01998.1| PROBABLE SUCCINYL-CoA SYNTHETASE (ALPHA CHAIN) SUCD (SCS-ALPHA) [Mycobacterium tuberculosis H37Rv] gi|13880543|gb|AAK45227.1| succinyl-CoA synthetase, alpha subunit [Mycobacterium tuberculosis CDC1551] gi|134149392|gb|EBA41437.1| succinyl-CoA synthetase (alpha chain) sucD [Mycobacterium tuberculosis str. Haarlem] gi|148504883|gb|ABQ72692.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis H37Ra] gi|148720688|gb|ABR05313.1| succinyl-CoA synthetase alpha subunit sucD [Mycobacterium tuberculosis F11] gi|253321524|gb|ACT26127.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis KZN 1435] gi|289439899|gb|EFD22392.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis KZN 605] gi|298494237|gb|EFI29531.1| succinyl-CoA synthetase, alpha subunit [Mycobacterium tuberculosis 94_M4241A] gi|308216429|gb|EFO75828.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu001] gi|308325241|gb|EFP14092.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu002] gi|308331629|gb|EFP20480.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu003] gi|308335440|gb|EFP24291.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu004] gi|308339246|gb|EFP28097.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu005] gi|308342890|gb|EFP31741.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu006] gi|308346808|gb|EFP35659.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu007] gi|308350725|gb|EFP39576.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu008] gi|308355386|gb|EFP44237.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu009] gi|308359325|gb|EFP48176.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu010] gi|308363232|gb|EFP52083.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu011] gi|308366889|gb|EFP55740.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis SUMu012] gi|323720663|gb|EGB29741.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis CDC1551A] gi|328459763|gb|AEB05186.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis KZN 4207] Length = 303 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 149/307 (48%), Positives = 201/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVS- 239 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 240 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALA 296 Query: 294 VELLGSL 300 E+L SL Sbjct: 297 REILLSL 303 >gi|218752617|ref|ZP_03531413.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis GM 1503] Length = 300 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 148/307 (48%), Positives = 201/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+++AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAVDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILLSL 300 >gi|297190796|ref|ZP_06908194.1| succinyl-CoA synthetase subunit alpha [Streptomyces pristinaespiralis ATCC 25486] gi|197722577|gb|EDY66485.1| succinyl-CoA synthetase subunit alpha [Streptomyces pristinaespiralis ATCC 25486] Length = 296 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 134/300 (44%), Positives = 188/300 (62%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++ + K +KVLVQG+TG G HT + +L T VV G++P+K VPVF Sbjct: 1 MAVFLTKESKVLVQGMTGAEGMKHTRR-MLASGTDVVAGVNPRKAGQVVDFDERAVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 V EA T A+ +V++VPP A A++E+ +A I L V ITEGIPV D V +A + Sbjct: 60 GVREAMAATGADVAVVFVPPPFAKAAVMEAADAGIGLAVVITEGIPVHDAVAFQAYAAER 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSI-FRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +R+IGPNCPG+++P GI+P I G +G++S+SGTLTY+ +++ +G S+ Sbjct: 120 GTRIIGPNCPGLISPGQSNAGIIPADIAAEPGRIGLVSKSGTLTYQLMYELRD--IGFSS 177 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDPV GT ID L F D TE IV++GEIGG AEE AA ++ + KP+ Sbjct: 178 AVGIGGDPVVGTTHIDCLAAFEKDPDTELIVLIGEIGGDAEERAAAYITEHV----TKPV 233 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG++AG TAP G+TMGHAGA++SG G AE K A++ AG+ + +P R + E L + Sbjct: 234 VGYIAGFTAPEGKTMGHAGAIVSGSSGTAEAKKQALEAAGVRVGSTPTETSRLVRERLAA 293 >gi|221124756|ref|XP_002160938.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 285 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 175/280 (62%), Positives = 209/280 (74%), Gaps = 6/280 (2%) Query: 21 GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPP 80 GTFH +QAI Y T++VGG+ P KG + G PVF +V EAKE T +ASVIYVPP Sbjct: 1 GTFHCQQAISY-GTKIVGGVSPNKGGSVHLGR----PVFNSVKEAKENTKCDASVIYVPP 55 Query: 81 SGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS-SRLIGPNCPGILTPDSCK 139 GA AIIE+IEAE+ LIVCITEGIP DMV+VK LE+ S SRL+GPNCPGI+ P CK Sbjct: 56 PGAAAAIIEAIEAEVGLIVCITEGIPQQDMVKVKHVLERQSVSRLLGPNCPGIIKPGECK 115 Query: 140 IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL 199 IGIMPG I + G +GI+SRSGTLTYEAV QTS GLGQS VGIGGDP GT FID LE+ Sbjct: 116 IGIMPGHIHKPGCIGIVSRSGTLTYEAVHQTSTVGLGQSLCVGIGGDPFNGTNFIDCLEV 175 Query: 200 FLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGA 259 FL D T+ ++M+GEIGG+AEE AA++L KKPIVGF+AG TAPPGR MGHAGA Sbjct: 176 FLKDPETKGMIMIGEIGGAAEERAAEYLLKYNSGPNKKPIVGFIAGLTAPPGRRMGHAGA 235 Query: 260 VISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 +ISGGKGGAEDKI A++EAG+ + SPA++G +L + Sbjct: 236 IISGGKGGAEDKIKALEEAGVTVTRSPAQMGTTLRTVFDD 275 >gi|302544605|ref|ZP_07296947.1| succinyl-CoA synthetase, alpha subunit [Streptomyces hygroscopicus ATCC 53653] gi|302462223|gb|EFL25316.1| succinyl-CoA synthetase, alpha subunit [Streptomyces himastatinicus ATCC 53653] Length = 294 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 137/290 (47%), Positives = 187/290 (64%), Gaps = 9/290 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KV+VQG+TG G HT + +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKESKVIVQGMTGSEGQKHTRR-MLASGTNIVGGVNPRKAGTTVDFDGNEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 +V EA E T A+ +VI+VP A+IE+I+AEIPL V ITEGI V D A + Sbjct: 60 SVKEAIEATGADVTVIFVPEKFTKSAVIEAIDAEIPLAVVITEGIAVHDSANFWAYAGQK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPADITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + VGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA F+K KP Sbjct: 178 SCVGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTE 283 >gi|254456457|ref|ZP_05069886.1| malate--CoA ligase subunit alpha [Candidatus Pelagibacter sp. HTCC7211] gi|207083459|gb|EDZ60885.1| malate--CoA ligase subunit alpha [Candidatus Pelagibacter sp. HTCC7211] Length = 295 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 136/303 (44%), Positives = 197/303 (65%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++++ K+TK+L+QG TGK GTFH E+ I Y + V+GG+ P KG PVF Sbjct: 1 MAVIIQKDTKILIQGFTGKMGTFHAEEMIKY-GSNVIGGVTPGKGGQKHLDK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A AS+++VPP+ A D+ +E+ +A I V I +GIP DM+R+K + + Sbjct: 56 TVKDAVQETGATASILFVPPAFAADSAMEAADAGIKTCVAIVDGIPSHDMIRIKRYMRRY 115 Query: 121 ----SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L+GPNC GI++P +GIMPG I+++G VGI+SRSGTL YEA Q +G Sbjct: 116 SRKEKMTLVGPNCAGIISPGKSMLGIMPGHIYKEGRVGIISRSGTLGYEAAQQLMDLNIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D++E F D+ T+ I+M+GEIGG E A +F K+ K Sbjct: 176 ISTSVGIGGDPINGSSFRDIIEKFETDDETDLILMIGEIGGPQEVAAGEFAKENM----K 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KPIVG++AG TAP GR MGHAGA++S A +K+ +KE G+ I+ +P+ +G ++ E+ Sbjct: 232 KPIVGYIAGLTAPKGRVMGHAGAIVSAYGESAVEKVELLKECGVTISKNPSVMGETVKEV 291 Query: 297 LGS 299 L Sbjct: 292 LNR 294 >gi|126460263|ref|YP_001056541.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Pyrobaculum calidifontis JCM 11548] gi|126249984|gb|ABO09075.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Pyrobaculum calidifontis JCM 11548] Length = 293 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 134/301 (44%), Positives = 190/301 (63%), Gaps = 10/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV NT+V+VQG TG+ G+FH ++ + Y T+VV G+ P KG T G VPV+ Sbjct: 1 MTVLVSPNTRVVVQGATGREGSFHLQRMLEY-GTKVVAGVTPGKGGTTVHG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA R ANASV++VP A DA++E+++A I L+V ITE IP+ D +R Sbjct: 56 TVEEAVRRHGANASVVFVPAKFAPDAVLEAVDAGIELVVVITEHIPIHDTLRAVNYARVR 115 Query: 121 SSRLIGPNCPGILTPD-SCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPGI+ P K+GIMP +I++ G + ++SRSGTLTYE +Q + G G + Sbjct: 116 GVTVIGPNCPGIVAPPVRTKLGIMPNNIYQTPGKIAVVSRSGTLTYEISYQLVKAGFGIN 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 A+G+GGDP+ G + ++ D + IV++GE+GG AEE A+ + KKP Sbjct: 176 IAIGVGGDPIVGLDLMEATVKVAEDPDVDGIVVIGEVGGDAEERLAKLYAE---GAIKKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 IV +VAG+TAPPG+ MGHAGA++ G G A KI A K AGI +A +P + + L +LL Sbjct: 233 IVAYVAGRTAPPGKRMGHAGAIVMLGSGDARGKIEAFKAAGIPVAETPFEVPQLLAKLLK 292 Query: 299 S 299 Sbjct: 293 R 293 >gi|82594494|ref|XP_725448.1| succinyl-CoA synthetase subunit alpha [Plasmodium yoelii yoelii str. 17XNL] gi|23480460|gb|EAA17013.1| Succinyl-CoA synthetase alpha subunit [Plasmodium yoelii yoelii] Length = 330 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 157/288 (54%), Positives = 205/288 (71%), Gaps = 9/288 (3%) Query: 21 GTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--GNVNVPVFTTVAEAKERTAANASVIYV 78 G+FHT +A+ Y T++VGG++P K + W +PVF +V EAKE+T ASVIYV Sbjct: 43 GSFHTTEALKY-GTKMVGGVNPSKKGSTWASIDNKYTLPVFGSVLEAKEKTNCYASVIYV 101 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK-SSSRLIGPNCPGILTPDS 137 P A +AIIESIE+EIPLIVCITEGI DM+ VKA L SRLIGPNCPGI+ P Sbjct: 102 PHQHAKNAIIESIESEIPLIVCITEGICQHDMLEVKACLNMSKKSRLIGPNCPGIIKPGE 161 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 KIGI+P I +KG VGI+SRSGTLTYE V QT++ GLGQST +GIGGDP GT FID L Sbjct: 162 SKIGILPSHIHKKGCVGIVSRSGTLTYEGVNQTTKVGLGQSTCIGIGGDPFHGTNFIDCL 221 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-----KRGRKKPIVGFVAGKTAPPGR 252 +LFL D+ T+ I+++GEIGG+AEE+ A++L + K+ +KK I F+AGK APPG+ Sbjct: 222 KLFLEDDETKCILLIGEIGGNAEEQVAEWLIENNVDDPEKKKKKKNIFAFIAGKCAPPGK 281 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 MGHAGA+ISGGKG A+ KI A++ AG+ + +P +IG + ++ + Sbjct: 282 RMGHAGALISGGKGTADGKIEALRNAGVHVVINPTKIGEEIYNVMKDI 329 >gi|126663987|ref|ZP_01734981.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [Flavobacteria bacterium BAL38] gi|126623936|gb|EAZ94630.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [Flavobacteria bacterium BAL38] Length = 290 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 156/298 (52%), Positives = 215/298 (72%), Gaps = 8/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K++VQG TG GTFH Q I Y T VVGG+ P KG + ++ PVF Sbjct: 1 MSVLVNKNSKIIVQGFTGSEGTFHASQMIEY-GTNVVGGVTPGKGGSTH----LDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E+ A+ S+I+VPP+ A DAI+E+ EA I +I+CITEGIPV DM++ ++ Sbjct: 56 TVKDAVEKAGADTSIIFVPPAFAADAIMEAAEAGIKVIICITEGIPVADMIKAYDYIKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG++TP+ K+GIMPG +F+KG+VGI+S+SGTLTYEA Q ++GLG +TA Sbjct: 116 DCRLVGPNCPGVITPEEAKVGIMPGFVFKKGTVGIVSKSGTLTYEAADQVVKQGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE I+M+GEIGG E +AA+++K + G +KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETEIIIMIGEIGGQLEADAAKWIKAD---GNRKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G AE K M+E GI + SPA IG+ + E+LG Sbjct: 233 GFIAGETAPKGRTMGHAGAIVGGADDTAEAKKRIMRENGIHVVDSPAEIGKKVKEVLG 290 >gi|150398913|ref|YP_001322680.1| succinyl-CoA synthetase subunit alpha [Methanococcus vannielii SB] gi|150011616|gb|ABR54068.1| succinyl-CoA synthetase, alpha subunit [Methanococcus vannielii SB] Length = 287 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 131/295 (44%), Positives = 193/295 (65%), Gaps = 9/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NT+ +VQG+TG G FHT Q +L C+T +V G+ P K G +PV+ TV Sbjct: 2 ILLDENTRAVVQGITGNQGRFHT-QNMLECKTNIVAGVTPGKAGQDVYG----IPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E E+ NASVI++P DA E+I+A I L+ ITE +P+ D + + + +K Sbjct: 57 LETVEKYDVNASVIFIPAPFVKDAAYEAIDAGIELVTIITEHVPIQDSMDIVSYGKKHGV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PG+ +P K+GI+P +I ++G++G++SRSGTLTYE Q + G GQST VG Sbjct: 117 NIIGPNTPGLASPKVGKLGIIPMNILKEGNIGMISRSGTLTYEIASQLTISGHGQSTCVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV G +I+VLE+F D T++I+MVGEIGG+AEE AA+ + KKP++ + Sbjct: 177 IGGDPVTGLRYIEVLEMFEKDRETDAIIMVGEIGGNAEENAAEKM----VSKMKKPVISY 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG++AP G+ MGHAGA+I G G A+ K+ A++ +G +A + I L E++ Sbjct: 233 IAGQSAPEGKRMGHAGAIIEKGVGTAKSKMEALENSGAYVAKRISDIPLILKEII 287 >gi|86211694|gb|ABC87498.1| succinyl-CoA synthetase alpha chain [Streptomyces sp. NRRL 30748] Length = 294 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 134/290 (46%), Positives = 188/290 (64%), Gaps = 9/290 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KV+VQG+TG G HT + +L T +VGG++P+K T +PVF Sbjct: 1 MAIFLTKESKVIVQGMTGSEGQKHTRR-MLASGTNIVGGVNPRKAGTTVDFDGTEIPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 +V EA + T A+ +VI+VP A+IE+I+AEIPL V ITEGI V D A + Sbjct: 60 SVKEAIDATGADVTVIFVPEKFTKSAVIEAIDAEIPLAVVITEGIAVHDSANFWAYAGKK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPADITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + VGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA F+K KP Sbjct: 178 SCVGIGGDPIIGTTHIDALAAFQADPDTDLIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSE 283 >gi|289761087|ref|ZP_06520465.1| succinyl-CoA synthetase (alpha chain) sucD [Mycobacterium tuberculosis GM 1503] gi|289708593|gb|EFD72609.1| succinyl-CoA synthetase (alpha chain) sucD [Mycobacterium tuberculosis GM 1503] Length = 303 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 148/307 (48%), Positives = 201/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+++AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAVDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVS- 239 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 240 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALA 296 Query: 294 VELLGSL 300 E+L SL Sbjct: 297 REILLSL 303 >gi|256420259|ref|YP_003120912.1| succinyl-CoA synthetase, alpha subunit [Chitinophaga pinensis DSM 2588] gi|256035167|gb|ACU58711.1| succinyl-CoA synthetase, alpha subunit [Chitinophaga pinensis DSM 2588] Length = 293 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 163/300 (54%), Positives = 215/300 (71%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+KV+VQG TG GTFH Q I Y TQVVGG+ P KG + +++ PVF Sbjct: 1 MSVLVNKNSKVIVQGFTGTEGTFHATQMIEY-GTQVVGGVTPGKGGS----KHLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T A+ S+I+VPP A DAI+E+ EA I LIVCITEGIPV DM+R K L Sbjct: 56 TVDDAVKATGADVSIIFVPPGFAADAIMEAAEAGIALIVCITEGIPVQDMIRAKNFLVGR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPG++T + K+GIMPG IF+KG++GI+S+SGTLTYEA Q + GLG STA Sbjct: 116 NSRLIGPNCPGVITAEEAKVGIMPGFIFKKGNIGIVSKSGTLTYEAADQVVKAGLGVSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT D +EL + D T I+M+GEIGGS E +AA+++K+ KP+V Sbjct: 176 IGIGGDPIIGTPTKDAVELLMNDPETVGIIMIGEIGGSMEADAAKWIKEN----GTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAPPGR MGHAGA+I G A K+ M E G+ + SPA IG+++ E+L ++ Sbjct: 232 GFIAGQTAPPGRRMGHAGAIIGGADDTAAAKMKIMAECGVHVVESPANIGKTMAEVLKAV 291 >gi|110668755|ref|YP_658566.1| succinate--CoA ligase, alpha subunit (ADP-forming) [Haloquadratum walsbyi DSM 16790] gi|109626502|emb|CAJ52964.1| succinate--CoA ligase, alpha subunit (ADP-forming) [Haloquadratum walsbyi DSM 16790] Length = 289 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 148/298 (49%), Positives = 200/298 (67%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI VD T+V+VQG+TG G FHT + I Y V G + P +G G VPV+ Sbjct: 1 MSIFVDDETRVVVQGITGGEGKFHTSEMITYGTNVVAGAV-PGRGGDEING----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A ANA+V++VPP A DAI E+++A++ L+V ITEGIP DM +V RL + Sbjct: 56 TVDAAVRTEDANAAVVFVPPRFASDAIFEALDADLELVVAITEGIPTQDMTKVHQRLSEV 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+TP K+GI+PG+IF GSVG++SRSGTLTY+ V + +GQ+TA Sbjct: 116 DTRLIGPNCPGIITPGQTKLGILPGNIFEPGSVGLVSRSGTLTYQVVSNLTDRDIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID L+ F +D TE++VM GEIGG EE+AA F+ ++ P+ Sbjct: 176 IGIGGDPIVGTSFIDTLDAFESDPHTEAVVMCGEIGGEDEEQAAAFITEQM----DTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G AE KINA+ +A + + +P + + L Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAESKINALTDADVPVGNTPDEVAEYIESFL 289 >gi|317124201|ref|YP_004098313.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Intrasporangium calvum DSM 43043] gi|315588289|gb|ADU47586.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Intrasporangium calvum DSM 43043] Length = 297 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 140/302 (46%), Positives = 195/302 (64%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-VNVPVF 59 M+I ++ ++KV+VQG+TG G HT Q +L T +VGG++P+K T + V VPVF Sbjct: 1 MAIFLNADSKVIVQGMTGSEGMKHT-QRMLKSGTTIVGGVNPRKAGTTVEFEDGVTVPVF 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EA + T AN SVI+VP A +E+I+AEIPL V ITEG+ V D + Sbjct: 60 GTVREAIDATGANVSVIFVPAQFTKAAAVEAIDAEIPLAVVITEGVAVKDTAEFFTYAQS 119 Query: 120 SS-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPG++TP GI+P +I G +G++S+SGTLTY+ +++ G S Sbjct: 120 KGTTRIIGPNCPGLITPGVSNAGIIPATISGPGRIGLVSKSGTLTYQMMYELRD--FGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV GT ID LE F D T++IVM+GEIGG AEE AA ++K+ KP Sbjct: 178 TAVGIGGDPVIGTTHIDCLEAFQNDPDTDAIVMIGEIGGDAEERAAAYIKEHV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + E++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKQEALEAAGVKVGKTPSATAALMREIMQ 293 Query: 299 SL 300 L Sbjct: 294 GL 295 >gi|50955503|ref|YP_062791.1| succinyl-CoA synthetase subunit alpha [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951985|gb|AAT89686.1| succinyl-CoA synthetase, alpha chain [Leifsonia xyli subsp. xyli str. CTCB07] Length = 295 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 149/302 (49%), Positives = 207/302 (68%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K++KV+VQG+TG GT HT +L T VVGG++ +K T T G+V +PVF Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHTA-LMLKAGTTVVGGVNARKAGTSVTHGDVELPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A+ S+++VPP+ A DA++E+I+AEIPL+V ITEGIPV D V A ++ Sbjct: 60 TVVEAIEKTGADVSIVFVPPAFAKDAMVEAIDAEIPLLVVITEGIPVQDAAEVWAYAKEK 119 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPG++ P +GI P +I KG +G++S+SGTLTY+ +++ LG S Sbjct: 120 GNKTRIIGPNCPGVIIPGESLVGITPATITGKGPIGLVSKSGTLTYQMMYELRD--LGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L F AD T +IVM+GEIGG AEE AA F+K KP Sbjct: 178 TAIGIGGDPIIGTTHIDALAAFEADPETRAIVMIGEIGGDAEERAADFIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ L E+ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETASLLREVYA 293 Query: 299 SL 300 +L Sbjct: 294 AL 295 >gi|289641098|ref|ZP_06473266.1| succinyl-CoA synthetase, alpha subunit [Frankia symbiont of Datisca glomerata] gi|289509039|gb|EFD29970.1| succinyl-CoA synthetase, alpha subunit [Frankia symbiont of Datisca glomerata] Length = 291 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 142/302 (47%), Positives = 201/302 (66%), Gaps = 13/302 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +D+ +K+LVQG+TG G HT + +L +++VGG +PKK T G VPVF Sbjct: 1 MAIWLDETSKILVQGITGSEGRKHTAR-MLRAGSKIVGGTNPKKAGTEVEG----VPVFA 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAE E+T A+ SV+YVPP+G A+IE+I+A IPL+V ITEG+PV D A + Sbjct: 56 TVAETIEKTGADVSVVYVPPAGTKAAVIEAIDAGIPLVVVITEGVPVHDTTDFWAYAKSR 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPGI++P GI+P I +G +G++S+SGTLTY+ +++ G S Sbjct: 116 GNSTRIIGPNCPGIISPGRSNAGIIPADITPQGRIGLVSKSGTLTYQMMYELRD--FGFS 173 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV GT ID L F D T++IVM+GEIGG AEE AA ++++ KP Sbjct: 174 TCVGIGGDPVIGTTHIDALAAFETDPDTDAIVMIGEIGGDAEERAAAYIEEHV----TKP 229 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A+++AG+ + +P+ R + +++ Sbjct: 230 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTALAKKEALEKAGVRVGKTPSETARLMADVVR 289 Query: 299 SL 300 SL Sbjct: 290 SL 291 >gi|218199895|gb|EEC82322.1| hypothetical protein OsI_26601 [Oryza sativa Indica Group] Length = 432 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 163/264 (61%), Positives = 202/264 (76%), Gaps = 8/264 (3%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 VGG+ PKKG T G +PVF +VAEAK T ANASVIYVPP A AI+E++EAE+ Sbjct: 170 CVGGVTPKKGGTEHLG----LPVFNSVAEAKAETKANASVIYVPPPFAAAAIMEAMEAEL 225 Query: 96 PLIVCITEGIPVLDMVRVKARL-EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 L+VCITEGIP DMV+VKA L ++S +RLIGPNCPGI+ P CKIGIMPG I + G VG Sbjct: 226 DLVVCITEGIPQHDMVKVKAALNKQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVG 285 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 I+SRSGTLTYEAVFQT+ GLGQST VGIGGDP GT F+D LE F+ D TE IV++GE Sbjct: 286 IVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGE 345 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 IGG+AEE+AA F+++ + KP+V F+AG TAPPGR MGHAGA++SGGKG A+DKI A Sbjct: 346 IGGTAEEDAAAFIQESKTQ---KPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKA 402 Query: 275 MKEAGICIAPSPARIGRSLVELLG 298 ++EAG+ + SPA+IG ++ E+ Sbjct: 403 LREAGVTVVESPAKIGSTMFEIFK 426 >gi|171057185|ref|YP_001789534.1| succinyl-CoA synthetase subunit alpha [Leptothrix cholodnii SP-6] gi|171059381|ref|YP_001791730.1| succinyl-CoA synthetase subunit alpha [Leptothrix cholodnii SP-6] gi|170774630|gb|ACB32769.1| succinyl-CoA synthetase, alpha subunit [Leptothrix cholodnii SP-6] gi|170776826|gb|ACB34965.1| succinyl-CoA synthetase, alpha subunit [Leptothrix cholodnii SP-6] Length = 297 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 152/305 (49%), Positives = 206/305 (67%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTE--QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPV 58 MSIL++K+T+V+ QG+TGK G FHT QA + V G++PKK + ++P+ Sbjct: 1 MSILINKDTRVITQGITGKTGQFHTLGCQAYANGKNAFVAGVNPKKAGEKF----ADIPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 + +V EA ++ A SVIYVPP+GA AI E++EA++ L +CITEGIPV DM ++ Sbjct: 57 YASVKEAAQQQGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMK 116 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K + L+GPNCPG++TP+ KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPEEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV+ F D T++++M+GEIGG E EAA + K Sbjct: 177 IGLGQSSAVGIGGDPINGLKHIDVMRAFNDDPDTDAVIMIGEIGGPDEAEAAMWCKANM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G I +P+ + R Sbjct: 236 ---KKPIVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFTITRNPSEMARL 292 Query: 293 LVELL 297 L LL Sbjct: 293 LKALL 297 >gi|331699079|ref|YP_004335318.1| succinyl-CoA synthetase subunit alpha [Pseudonocardia dioxanivorans CB1190] gi|326953768|gb|AEA27465.1| succinyl-CoA synthetase, alpha subunit [Pseudonocardia dioxanivorans CB1190] Length = 295 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 144/302 (47%), Positives = 202/302 (66%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +++N+KV+VQG+TG GT H + +L T +VGG++ +K T T G ++ VF Sbjct: 1 MSIFLNENSKVIVQGITGGEGTKHATK-MLAAGTNIVGGVNARKAGTTVTIGGKDLTVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 TV EA + T A+ SV++VPP A DA+IE+I+AEIPL V ITEGIPV D A + Sbjct: 60 TVEEAIKETGADVSVVFVPPKFAKDAVIEAIDAEIPLAVVITEGIPVHDSAYFWAHAVAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI++P GI+P I G +G++S+SGTLTY+ +++ + +G S Sbjct: 120 GNKTRIIGPNCPGIISPGKSNAGIIPADIAGPGKIGLVSKSGTLTYQMMYELRE--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDPV GT ID LE F AD T +IVM+GEIGG AEE AA F++ KP Sbjct: 178 TAIGIGGDPVIGTTHIDALEAFEADPETAAIVMIGEIGGDAEERAAAFIQANVS----KP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + E++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAALMREIIA 293 Query: 299 SL 300 L Sbjct: 294 GL 295 >gi|323136041|ref|ZP_08071124.1| succinyl-CoA synthetase, alpha subunit [Methylocystis sp. ATCC 49242] gi|322399132|gb|EFY01651.1| succinyl-CoA synthetase, alpha subunit [Methylocystis sp. ATCC 49242] Length = 295 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 143/303 (47%), Positives = 197/303 (65%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T +L+QG+TG G+FH ++ I Y + VV G+ P KG G VPVF Sbjct: 1 MSILIDEKTPILIQGITGDKGSFHAKEMIEY-GSNVVAGVTPGKGGKTHHG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 TV EA + T A AS+ +V P+ DAI+E+ +A I LI IT+GIP DM++VK Sbjct: 56 TVKEAVKATGAQASITFVAPAFCADAIMEAADAGIRLICSITDGIPAQDMMKVKRYFLRF 115 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + ++GPNC GI++P +GIMPG I+ KGSVG++SRSGTL YEA Q + GLG Sbjct: 116 PKDRRPMMVGPNCAGIISPGKAMLGIMPGHIYAKGSVGLISRSGTLGYEAASQLKELGLG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L LF D TE+++++GEIGG E EA+ ++K+ Sbjct: 176 ISTSVGIGGDPINGSSFLDHLVLFDKDPETEAVLLIGEIGGPQEAEASAWIKEN----FS 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++GFVAG TAP GR MGHAGA+IS A +K MK G+ +AP+PA G ++ ++ Sbjct: 232 KPVIGFVAGLTAPKGRRMGHAGAIISATGDSAAEKTEIMKSYGLTVAPNPAEFGTTVAKV 291 Query: 297 LGS 299 L Sbjct: 292 LKR 294 >gi|269986563|gb|EEZ92846.1| succinyl-CoA synthetase, alpha subunit [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 288 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 142/293 (48%), Positives = 197/293 (67%), Gaps = 9/293 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DK+TKVLVQG+TG G FH++ A++ T+VV G+ P KG G V VF Sbjct: 1 MAILIDKDTKVLVQGITGHQGKFHSK-AMIDLGTKVVAGVTPGKGGERVNG----VRVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 V A E+T ANASV++VP D++IE+I+A I LI ITE +P DM+++ + Sbjct: 56 DVKTAVEKTGANASVVFVPALMTRDSVIEAIDAGIKLITIITEHVPFQDMLKINEYAKLK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPG+ P K+GI+P +I +KG VG++SRSGTLTYE V ++ GLG+ST Sbjct: 116 DVKIIGPNCPGLAAPGIGKLGIIPNTILKKGVVGVISRSGTLTYEIVNVITETGLGESTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGD V G FID L+LF DE T+++V+VGEIGG EE+AA+F++ + KP+V Sbjct: 176 LGIGGDKVPGIGFIDALKLFKQDEQTKAVVIVGEIGGDEEEKAAEFIR----KEFDKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 F+ G APPG+ MGHAGA+ISG G AE K+ A K+A + +A + +I L Sbjct: 232 AFIDGIYAPPGKRMGHAGAIISGKTGTAESKLKAFKKANVPVAKNFKKIATYL 284 >gi|215402753|ref|ZP_03414934.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis 02_1987] Length = 352 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 145/294 (49%), Positives = 196/294 (66%), Gaps = 14/294 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPS 287 >gi|72386785|ref|XP_843817.1| succinyl-CoA synthetase alpha subunit [Trypanosoma brucei TREU927] gi|62360279|gb|AAX80696.1| succinyl-CoA synthetase alpha subunit, putative [Trypanosoma brucei] gi|70800349|gb|AAZ10258.1| succinyl-CoA synthetase alpha subunit, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 301 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 166/298 (55%), Positives = 224/298 (75%), Gaps = 9/298 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +++NTKV+ QG+TGK GT+HTEQAI Y T++VGG++PKK + + +N+PVF TV Sbjct: 9 LWINQNTKVICQGITGKHGTYHTEQAIAY-GTKMVGGVNPKKAGSTY----LNLPVFGTV 63 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 AEA + T A+A+VIYVP A+ E++ AE+PL+V ITEGIP DM+RVK+ L ++ Sbjct: 64 AEAVKNTGADATVIYVPAPHCAAAVEEALVAEVPLVVVITEGIPQWDMLRVKSMLLSQNK 123 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P+ CKIGIMPG I +KG +G++SRSGTLTYEAV QT+ LGQS V Sbjct: 124 TRLIGPNCPGIIRPEECKIGIMPGHIHKKGCIGVVSRSGTLTYEAVAQTTAVNLGQSLCV 183 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT ID ++L+L D TE I+++GEIGG+AEEEAA+F+K+ KKP+V Sbjct: 184 GIGGDPFNGTNMIDCVKLYLEDPGTEGIILIGEIGGTAEEEAAEFIKNH---PIKKPLVT 240 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+ G TAPPGR MGHAGAV+SGG+G A+ K+ A++ AG +A SPA++G + EL+ Sbjct: 241 FIGGATAPPGRRMGHAGAVVSGGQGTAKGKMEALEAAGAVVAHSPAQLGALMAELMKK 298 >gi|41033571|emb|CAF18452.1| succinyl-CoA synthetase alpha subunit [Thermoproteus tenax] Length = 293 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 134/299 (44%), Positives = 197/299 (65%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV +TKV+VQG+TGK G+FH ++ + Y T+VVGG+ P KG G VPVF Sbjct: 1 MTVLVGPDTKVIVQGITGKEGSFHAQRMLEY-GTKVVGGVTPGKGGATVAG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA T ANASV++VP A DA+ E+++A I LIV ITE IP+ + +R Sbjct: 56 SVEEAVRATGANASVVFVPAKFAADAVYEAVDAGIKLIVVITEHIPIHETLRFVNYARAR 115 Query: 121 SSRLIGPNCPGILTPD-SCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +IGPNCPG++ P K+GIMP S+++ G +G++SRSGTLTYE +Q ++ GLG + Sbjct: 116 GATVIGPNCPGLVAPPLKVKLGIMPNSVYQTPGRIGVVSRSGTLTYEISYQLARAGLGIN 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+G+GGDP+ GT+ ++ L D ++IV +GE+GG AEE A+ + KKP Sbjct: 176 TAIGVGGDPIVGTDLVEAALLMSRDPEVDAIVAIGEVGGDAEERLAKLYAEGVI---KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 IV +VAG+TAPP + MGHAGA++ G G A K+ ++EAGI +A +P + + +++ L Sbjct: 233 IVAYVAGRTAPPEKRMGHAGAIVMLGSGDANSKVKTLREAGIPVADTPVEVPQLVLKAL 291 >gi|302342617|ref|YP_003807146.1| succinyl-CoA synthetase, subunit alpha [Desulfarculus baarsii DSM 2075] gi|301639230|gb|ADK84552.1| succinyl-CoA synthetase, alpha subunit [Desulfarculus baarsii DSM 2075] Length = 289 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 158/298 (53%), Positives = 208/298 (69%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KN++V+VQG+TG+ G FHTE+ I Y T VV G+ P KG + G PVF Sbjct: 1 MSILVNKNSRVVVQGVTGREGMFHTEKMIEY-GTNVVAGVTPGKGGSTVLGA----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A +T A+ SV++VP + A DA E+ +A I L+V ITE IP DM+ KA L Sbjct: 56 TVAQAVAQTGADVSVVFVPAAFAADAACEAADAGIKLVVVITEHIPAKDMIMAKAYLRAR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++GPNCPG++TP CK+GIMPG I + G VG++SRSGTLTYE V Q +Q GLGQST Sbjct: 116 GVLMVGPNCPGVITPGECKLGIMPGYIHKPGKVGLISRSGTLTYEVVHQLTQAGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ G F+++L+LF AD+ TE++ +GEIGG AEE AA +K G KP+ Sbjct: 176 IGIGGDPIIGLGFVELLKLFAADDQTEAVCTIGEIGGDAEERAAALVKA----GYPKPVF 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GFVAG TAPPG+ MGHAGA+ISGGKG A DK+ AM++AGI + G ++ ++LG Sbjct: 232 GFVAGLTAPPGKRMGHAGAIISGGKGKAADKLAAMEDAGITVVRRLGDFGATVAKVLG 289 >gi|289744683|ref|ZP_06504061.1| succinyl-CoA synthetase alpha subunit sucD [Mycobacterium tuberculosis 02_1987] gi|289685211|gb|EFD52699.1| succinyl-CoA synthetase alpha subunit sucD [Mycobacterium tuberculosis 02_1987] Length = 355 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 145/294 (49%), Positives = 196/294 (66%), Gaps = 14/294 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVS- 239 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 240 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPS 290 >gi|91790510|ref|YP_551462.1| succinyl-CoA synthetase subunit alpha [Polaromonas sp. JS666] gi|91699735|gb|ABE46564.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Polaromonas sp. JS666] Length = 297 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 151/305 (49%), Positives = 206/305 (67%), Gaps = 16/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++++TKV+ QG+TGK G FHT Y + V G++PKK + G +P+ Sbjct: 1 MSIYINQHTKVITQGITGKTGQFHTRMCRDYANGKECFVAGVNPKKAGEDFEG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + V EA + T A SVIYVPP+GA AI E++EA + L +CITEGIPV DM+ V+ R++ Sbjct: 57 YANVTEAAQATGATVSVIYVPPAGAAAAIWEAVEANLDLAICITEGIPVRDMLEVRNRMK 116 Query: 119 ------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TP+ KIGIMPG I RKG +G++SRSGTLTYEAV Q ++ Sbjct: 117 AKEAAGGKRTLLLGPNCPGLITPEEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS+AVGIGGDP+ G + IDV++ F D T++++M+GEIGG E EAA + K Sbjct: 177 IGLGQSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAAVWCKANM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIVGF+AG TAP G+ MGHAGA+ISGG A+ K+ M+E G + +P+ + + Sbjct: 236 ---KKPIVGFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFTVTRNPSEMAKL 292 Query: 293 LVELL 297 L LL Sbjct: 293 LKALL 297 >gi|215410542|ref|ZP_03419350.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis 94_M4241A] Length = 306 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 151/308 (49%), Positives = 202/308 (65%), Gaps = 15/308 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALA 293 Query: 294 VE-LLGSL 300 E LLGSL Sbjct: 294 REILLGSL 301 >gi|119872537|ref|YP_930544.1| succinyl-CoA synthetase, alpha subunit [Pyrobaculum islandicum DSM 4184] gi|119673945|gb|ABL88201.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Pyrobaculum islandicum DSM 4184] Length = 293 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 133/301 (44%), Positives = 187/301 (62%), Gaps = 10/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV T+V+VQG TG+ G+FH + + Y T+VV G+ P KG T G VPV+ Sbjct: 1 MTVLVSPKTRVVVQGATGREGSFHLLRMLEY-GTKVVAGVTPGKGGTSVHG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++ ANASV++VP A DA++E+++A I LI ITE IP+ D +RV Sbjct: 56 TVEEAVKKQGANASVVFVPARFAADAVLEAVDAGIELITVITEHIPIHDTLRVVNYARAR 115 Query: 121 SSRLIGPNCPGILTPD-SCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPGI+ P K+GIMP SI++ G + I+SRSGTLTYE +Q + G G + Sbjct: 116 GVTVIGPNCPGIVAPPLKTKLGIMPNSIYQTPGRIAIVSRSGTLTYEISYQLIRAGFGIN 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 A+G+GGDP+ G + ++ D E IV++GE+GG AEE A+ + KP Sbjct: 176 IAIGVGGDPIVGLDLMEATLKVAEDPEVEGIVVIGEVGGDAEERIAKLYAE---GAFNKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 IV +VAG+TAPPG+ MGHAGA++ G G A KI A + GI +A +P + + L +LL Sbjct: 233 IVAYVAGRTAPPGKRMGHAGAIVMMGTGDARSKIEAFRSVGIPVAETPFEVPQLLSKLLK 292 Query: 299 S 299 Sbjct: 293 K 293 >gi|226307915|ref|YP_002767875.1| succinyl-CoA synthetase alpha subunit [Rhodococcus erythropolis PR4] gi|229495132|ref|ZP_04388878.1| succinate-CoA ligase, alpha subunit family [Rhodococcus erythropolis SK121] gi|226187032|dbj|BAH35136.1| succinyl-CoA synthetase alpha subunit [Rhodococcus erythropolis PR4] gi|229318063|gb|EEN83938.1| succinate-CoA ligase, alpha subunit family [Rhodococcus erythropolis SK121] Length = 300 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 146/307 (47%), Positives = 200/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 M+I + K++KV+VQG+TG GT HT +L TQVVGG++ +K T G V Sbjct: 1 MAIFLTKDSKVIVQGITGGEGTKHTA-LMLKAGTQVVGGVNARKAGTTVSHVAADGSPVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV EA + T A+ S+ +VPP+ + DAI+E+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFATVEEAIKETGADVSIAFVPPAFSKDAIVEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 R--LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +R+IGPNCPGI+TP +GI P +I G +G++S+SGTLTY+ +++ Sbjct: 120 YNESKGKKTRIIGPNCPGIITPGEALVGITPANIAGTGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKQEALEAAGVKVGKTPSATAALA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILQSL 300 >gi|298524444|ref|ZP_07011853.1| succinyl-CoA ligase subunit alpha [Mycobacterium tuberculosis 94_M4241A] gi|298494238|gb|EFI29532.1| succinyl-CoA ligase subunit alpha [Mycobacterium tuberculosis 94_M4241A] Length = 309 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 151/308 (49%), Positives = 202/308 (65%), Gaps = 15/308 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVS- 239 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 240 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALA 296 Query: 294 VE-LLGSL 300 E LLGSL Sbjct: 297 REILLGSL 304 >gi|126740183|ref|ZP_01755872.1| succinyl-CoA synthetase subunit alpha [Roseobacter sp. SK209-2-6] gi|126718638|gb|EBA15351.1| succinyl-CoA synthetase subunit alpha [Roseobacter sp. SK209-2-6] Length = 296 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 138/303 (45%), Positives = 188/303 (62%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D++++V+VQG+TGK FHT+ I Y V G VPVF Sbjct: 1 MSILLDRSSRVIVQGITGKIARFHTKDMIEYGTNVVGGV-----VPGKGGEVVEGVPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 TV EA E T A+AS+++VPP A D+I+E+ +A I VCIT+GIP DM+RVK + Sbjct: 56 TVKEAVEATDADASIVFVPPPFAADSIMEAADAGIRYCVCITDGIPAQDMIRVKRYMYRY 115 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L GPNC G ++P +GIMPG I+ G+VGI+ RSGTL YEA Q + G+G Sbjct: 116 PRDKRMVLTGPNCAGTISPGKALLGIMPGHIYLPGNVGIIGRSGTLGYEAAAQLKEYGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+L+ F D TE I M+GEIGG E EAA ++K+ Sbjct: 176 VSTSVGIGGDPINGSSFKDILQWFEQDPETEVIAMIGEIGGPQEAEAADYIKNHV----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ +VAG TAP GRTMGHAGA+IS A +K+ + AG+ +A +PA IG ++ + Sbjct: 232 KPVIAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILSAAGVIVAENPAVIGETIARV 291 Query: 297 LGS 299 + Sbjct: 292 MKK 294 >gi|261326909|emb|CBH09882.1| succinyl-CoA synthetase alpha subunit, putative [Trypanosoma brucei gambiense DAL972] Length = 301 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 166/298 (55%), Positives = 224/298 (75%), Gaps = 9/298 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +++NTKV+ QG+TGK GT+HTEQAI Y T++VGG++PKK + + +N+PVF TV Sbjct: 9 LWINQNTKVICQGITGKHGTYHTEQAIAY-GTKMVGGVNPKKAGSTY----LNLPVFGTV 63 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 AEA + T A+A+VIYVP A+ E++ AE+PL+V ITEGIP DM+RVK+ L ++ Sbjct: 64 AEAVKNTGADATVIYVPAPHCAAAVEEALVAEVPLVVVITEGIPQWDMLRVKSMLLSQNK 123 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPGI+ P+ CKIGIMPG I +KG +G++SRSGTLTYEAV QT+ LGQS V Sbjct: 124 TRLIGPNCPGIIRPEECKIGIMPGHIHKKGCIGVVSRSGTLTYEAVAQTTAVNLGQSLCV 183 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT ID ++L+L D TE I+++GEIGG+AEEEAA+F+K+ KKP+V Sbjct: 184 GIGGDPFNGTNMIDCVKLYLEDPGTEGIILIGEIGGTAEEEAAEFIKNH---PIKKPLVT 240 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+ G TAPPGR MGHAGAV+SGG+G A+ K+ A++ AG +A SPA++G + EL+ Sbjct: 241 FIGGATAPPGRRMGHAGAVVSGGQGTAKGKMEALEAAGAVVAHSPAQLGALMAELMKK 298 >gi|313125862|ref|YP_004036132.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Halogeometricum borinquense DSM 11551] gi|312292227|gb|ADQ66687.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Halogeometricum borinquense DSM 11551] Length = 289 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 146/298 (48%), Positives = 210/298 (70%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD +T+V+VQG+TG G FHT+Q + Y V G + P KG G +PV+ Sbjct: 1 MSILVDDDTRVVVQGITGGEGNFHTQQMVEYGTNVVAGAV-PGKGGQEVDG----IPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A E A+ASV++VPP+ AGDA+ E+++ ++ L+V ITEGIP DM +V RL + Sbjct: 56 TVNQAVEEEDADASVVFVPPAFAGDAVFEALDTDLDLVVAITEGIPTQDMAKVNKRLSEV 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPG++TP K+GI+PG+IF G+VG++SRSGTLTY+ V + G+GQ+TA Sbjct: 116 DTHLVGPNCPGLITPGEAKLGILPGNIFESGNVGLVSRSGTLTYQVVSNLTDRGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT F+D LELF AD+ T+++VM GEIGG EE+AA+++ + P+ Sbjct: 176 IGIGGDPIIGTSFVDALELFEADKDTDAVVMCGEIGGEDEEQAAKYIAENM----DTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G AE KI+A+ +AG+ + +P + + + L Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAESKISALNDAGVPVGDTPNEVADHIEDFL 289 >gi|225165682|ref|ZP_03727484.1| succinyl-CoA synthetase, alpha subunit [Opitutaceae bacterium TAV2] gi|224800071|gb|EEG18498.1| succinyl-CoA synthetase, alpha subunit [Opitutaceae bacterium TAV2] Length = 311 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 149/307 (48%), Positives = 207/307 (67%), Gaps = 16/307 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+ TKVLVQG+TG G H + ++ Y T++V G+ P KG ++ N VP+F Sbjct: 1 MAILITPETKVLVQGITGDFGGRHAKLSLDY-GTKIVAGVTPGKGGQFFIHENHKVPIFN 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV +A + T A S ++VPP A DAI+E ++A + L+V ITEGIP+ DMVRVK +++ Sbjct: 60 TVKDAVKATGATVSAVFVPPPFAADAILEGVDAGLDLVVTITEGIPIKDMVRVKRAMQRT 119 Query: 120 ---SSSRLIGPNCPGILTPDS-------CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 S +RL+GPNCPG++ P C+IGI PG I +KG VG++SRSGTLTYEAV+Q Sbjct: 120 TQSSKTRLVGPNCPGLVCPGEGKDSKGGCRIGIAPGYINKKGHVGVVSRSGTLTYEAVYQ 179 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + +G+GQST VGIGGDPV GT +DV++LF D T I+++GEIGG+AE EAA+++K Sbjct: 180 LTTKGIGQSTTVGIGGDPVNGTSHLDVIKLFNEDPDTHGIILIGEIGGNAEVEAARWIKK 239 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KKP+ GF+AG TAP GR MGHAGA++ G + A KI KE GI +A +P+ + Sbjct: 240 HC----KKPVAGFIAGATAPAGRRMGHAGAIVGGAEDTAAAKIAVFKECGIEVAETPSDM 295 Query: 290 GRSLVEL 296 +L+ Sbjct: 296 ADALLRA 302 >gi|295838516|ref|ZP_06825449.1| succinyl-CoA synthetase, alpha subunit [Streptomyces sp. SPB74] gi|302519547|ref|ZP_07271889.1| succinyl-CoA synthetase subunit alpha [Streptomyces sp. SPB78] gi|318058779|ref|ZP_07977502.1| succinyl-CoA synthetase subunit alpha [Streptomyces sp. SA3_actG] gi|318078964|ref|ZP_07986296.1| succinyl-CoA synthetase subunit alpha [Streptomyces sp. SA3_actF] gi|333026622|ref|ZP_08454686.1| putative succinyl-CoA synthetase subunit alpha [Streptomyces sp. Tu6071] gi|295827037|gb|EFG65202.1| succinyl-CoA synthetase, alpha subunit [Streptomyces sp. SPB74] gi|302428442|gb|EFL00258.1| succinyl-CoA synthetase subunit alpha [Streptomyces sp. SPB78] gi|332746474|gb|EGJ76915.1| putative succinyl-CoA synthetase subunit alpha [Streptomyces sp. Tu6071] Length = 294 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 140/299 (46%), Positives = 194/299 (64%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KV+VQG+TG G HT + +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKESKVIVQGMTGATGMKHT-RLMLGDGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA + T A+ SVI+VPP+ A A+IE+I+AEI L V ITEGI V D A + Sbjct: 60 SVAEAIKETGADVSVIFVPPAFAKAAVIEAIDAEIGLAVVITEGIAVHDSAAFWAYAQSK 119 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G + Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFT 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA ++K KP Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPETDLIVMIGEIGGDAEERAADYIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P + +L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPTETAKLARAIL 292 >gi|261749652|ref|YP_003257338.1| succinyl-CoA synthetase subunit alpha [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497745|gb|ACX84195.1| succinyl-CoA synthetase, alpha subunit [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 296 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 159/300 (53%), Positives = 207/300 (69%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DK+ +V+VQGLTGK G FHTEQ I Y T +VGG+ P KG + G VP+F Sbjct: 1 MSILIDKHIRVIVQGLTGKEGLFHTEQMINY-GTCIVGGVTPGKGGRKYLG----VPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ EA T + SVI+VP A DAI+ESI + +IVCITEGIPV +M+++K L+ Sbjct: 56 TMYEAVSYTGGDVSVIFVPSFFASDAILESISMNMRVIVCITEGIPVSNMIQIKNFLKGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIGPNCPGI++P+ K+GIMP +F +KG VGI+SRSGTLTYEA Q Q G G ST Sbjct: 116 KPRLIGPNCPGIISPEESKVGIMPNLVFNKKGKVGIVSRSGTLTYEAADQIVQYGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGD + G D+L+LFL D T+ IVM+GEIGG E +AA++ ++ KKPI Sbjct: 176 AIGIGGDSIIGMTITDILDLFLKDTETKCIVMIGEIGGKLEIDAAEWWIKNSE--NKKPI 233 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 +GF+AG+TAP GRTMGHAGAVI A+ K++ +K+ GI + SPA IG + E+L Sbjct: 234 IGFIAGQTAPKGRTMGHAGAVIGNKSETAQVKMDILKKNGIHVVISPADIGMKVHEVLQK 293 >gi|126305401|ref|XP_001380103.1| PREDICTED: similar to Phosphoribosyl transferase domain containing 1 [Monodelphis domestica] Length = 341 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 168/299 (56%), Positives = 219/299 (73%), Gaps = 6/299 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +DKNT+++ QG TGK GTFH++QA+ Y V G ++ +PVF T Sbjct: 44 NLYIDKNTRIICQGFTGKQGTFHSQQALDYGTNLVGGT-----TPGKGGKTHLGLPVFNT 98 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE+T A ASVIYVPP A A+ E++EAE+PL+VCITEGIP DMVRVK L + Sbjct: 99 VKEAKEQTGATASVIYVPPQFAAAAVKEAVEAEMPLVVCITEGIPQQDMVRVKHALMRQG 158 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 159 KTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 218 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT+FID L++FL D ATE I+++GEIGG+AEE AA FLK+ KP+V Sbjct: 219 IGIGGDPFNGTDFIDCLDVFLKDPATEGIILIGEIGGNAEENAAAFLKEHNSGPNAKPVV 278 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 279 SFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQNAGVVVSMSPAQLGSTIYKEFEK 337 >gi|296482469|gb|DAA24584.1| succinate-CoA ligase, GDP-forming alpha subunit precursor [Bos taurus] Length = 346 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 171/298 (57%), Positives = 218/298 (73%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VD+NTK++ QG TGK GTFH++QA+ Y V G ++ +PVF TV Sbjct: 50 LYVDRNTKIICQGFTGKQGTFHSQQALEYGTKLVGGT-----TPGKGGKTHLGLPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAE+ L+VCITEGIP DMVRVK +L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAIDEAIEAEVSLVVCITEGIPQQDMVRVKHKLLRQGK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RL+GPNCPG++ P CKIGIMPG I +KG VGI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLVGPNCPGVINPGECKIGIMPGHIHKKGRVGIVSRSGTLTYEAVHQTTQVGLGQSLCV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA+FLK + KP+V Sbjct: 225 GIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKAKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGTTMYKEFEK 342 >gi|328950884|ref|YP_004368219.1| succinyl-CoA synthetase, alpha subunit [Marinithermus hydrothermalis DSM 14884] gi|328451208|gb|AEB12109.1| succinyl-CoA synthetase, alpha subunit [Marinithermus hydrothermalis DSM 14884] Length = 290 Score = 274 bits (702), Expect = 7e-72, Method: Composition-based stats. Identities = 154/299 (51%), Positives = 202/299 (67%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+T+VLVQG+TG+ G FHTEQ I Y T++V G+ P KG G VPV+ Sbjct: 1 MSILVNKDTRVLVQGITGREGRFHTEQMIQY-GTRIVAGVTPGKGGQEVLG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +AS+I+VP A DA +E+ A IPL+V ITEGIP LDMVR +++ Sbjct: 56 TVREAVAHHEIDASIIFVPAPAAADAALEAARAGIPLVVLITEGIPALDMVRAVKEIKEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIG NCPG+++ + KIGIMPG +F+KG VG++SRSGTLTYEA S GLG +T Sbjct: 116 GVRLIGGNCPGLISAEETKIGIMPGHVFKKGKVGLISRSGTLTYEAAAALSAAGLGITTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F D+L LF D TE++V++GEIGGS EEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIIGTTFKDLLPLFNEDPETEAVVVIGEIGGSDEEEAAAWIKEHM----NKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+ G++AP G+ MGHAGA+I G G E K+ A EAG+ +A + I + + L S Sbjct: 232 GFIGGRSAPKGKRMGHAGAIIMGDVGTPESKLKAFAEAGVPVADTIDEIVELVQQALRS 290 >gi|291386439|ref|XP_002709730.1| PREDICTED: succinate-CoA ligase, GDP-forming alpha subunit [Oryctolagus cuniculus] Length = 346 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 173/298 (58%), Positives = 219/298 (73%), Gaps = 6/298 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DKNTKV+ QG TGK GTFH++QA+ Y V G ++ +PVF TV Sbjct: 50 LYIDKNTKVICQGFTGKQGTFHSQQALEYGTKLVGGT-----TPGKGGKTHLGLPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAE+PL+VCITEGIP DMVRVK +L ++ Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAIDEAIEAEMPLVVCITEGIPQQDMVRVKHKLLRQAK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 224 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID LE+FL D TE I+++GEIGG+AEE AA+FLK KP+V Sbjct: 225 GIGGDPFNGTNFIDCLEIFLNDSTTEGIILIGEIGGNAEENAAEFLKQHNSGPNAKPVVS 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+I+GGKGGA++KI+A++ AG+ ++ SPA++G ++ + Sbjct: 285 FIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEK 342 >gi|256829615|ref|YP_003158343.1| succinyl-CoA synthetase subunit alpha [Desulfomicrobium baculatum DSM 4028] gi|256578791|gb|ACU89927.1| succinyl-CoA synthetase, alpha subunit [Desulfomicrobium baculatum DSM 4028] Length = 689 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 137/291 (47%), Positives = 191/291 (65%), Gaps = 8/291 (2%) Query: 7 KNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 +N ++LVQGLTGK G H Y VV G+ P KG + G VPVF TV EA Sbjct: 407 ENCRILVQGLTGKQGQLHCRLMQEY-GANVVAGVTPGKGGSEVLG----VPVFDTVREAA 461 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + +AS+I+VP + A DA++E+ A I +VCIT+GIP LDM+R RL+ S +R+IG Sbjct: 462 KAMPIDASIIFVPGAMAPDAVLEAAAAGIGWVVCITDGIPQLDMLRALERLKDSPTRVIG 521 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNCPG++ P KIGIMPG IF G V + SRSGTLTYE V + ++ G+GQS VGIGGD Sbjct: 522 PNCPGLVMPGKTKIGIMPGDIFTPGPVAVFSRSGTLTYECVDRLTKAGIGQSVCVGIGGD 581 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P GT F D+ +L D T+++V++GEIGG AEEE Q++++ G + P+ GF+AG+ Sbjct: 582 PFVGTSFTDLCKLVRHDPDTKAVVILGEIGGKAEEELGQYMQE---SGFELPVFGFIAGR 638 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 TAPPG+ +GHAGA++ G GG E K+ AM ++G + +I ++ ++L Sbjct: 639 TAPPGKRLGHAGAILEKGAGGIEVKLQAMADSGFHLIDDLDQIAGAVAQVL 689 >gi|295698454|ref|YP_003603109.1| succinyl-CoA synthetase alpha chain [Candidatus Riesia pediculicola USDA] gi|291157077|gb|ADD79522.1| succinyl-CoA synthetase alpha chain [Candidatus Riesia pediculicola USDA] Length = 289 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 139/298 (46%), Positives = 204/298 (68%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNT+V+ QGLTGK G+FH++ + Y T++V G+ P KG+TY G +P+F Sbjct: 1 MSILINKNTRVVCQGLTGKKGSFHSDIDMKY-GTKIVSGVVPGKGNTYHLG----IPIFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA T AN SVIYVP +AI+E++++ I LI+ ITEGIP+LDM+ VK +L++ Sbjct: 56 TVKEAVFYTKANTSVIYVPAIFCKEAILEAVDSGIELIIVITEGIPILDMMVVKKKLQEN 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +IGPN PGI++P CKIGI P SI + G+VGI+SRSGTL YEAV Q S+ G+GQST Sbjct: 116 QDIIMIGPNSPGIISPGQCKIGIQPYSIHKIGAVGIISRSGTLMYEAVDQISRLGIGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGD + G +FI++L LF D T+ I+M+GEIGG+ EE+AA +++ KP+ Sbjct: 176 CVGIGGDMISGCDFIEILPLFEDDIDTKVILMIGEIGGNREEKAASYIQS----KVTKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + ++AG P + MGHAGA++ E+K+ +++ GI + + ++IG ++ + Sbjct: 232 LAYIAGLHVPRDQQMGHAGAILENVDLDIEEKMKFLEKNGIEVIQNISKIGENIRKYF 289 >gi|84497954|ref|ZP_00996751.1| succinyl-CoA synthetase alpha subunit [Janibacter sp. HTCC2649] gi|84381454|gb|EAP97337.1| succinyl-CoA synthetase alpha subunit [Janibacter sp. HTCC2649] Length = 293 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 139/300 (46%), Positives = 203/300 (67%), Gaps = 7/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++ ++KV+VQG+TG G HT +L T VVGG++PKK T ++PVF Sbjct: 1 MAIFLNADSKVIVQGMTGAVGMKHTT-LMLADGTAVVGGVNPKKAGTSVDFDGTDIPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E T AN SV++VPP+ A++E+I+AEIPL+V ITEG+PV D Sbjct: 60 SVKEAMEATGANVSVVFVPPAFTKSAVVEAIDAEIPLVVVITEGVPVKDSAEFFNYSLGK 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++R+IGPNCPG+++P +GI+PG I G +G++S+SGTLTY+ +++ + G STA Sbjct: 120 ATRIIGPNCPGLISPGKSNVGIIPGDIAGPGRIGLVSKSGTLTYQMMYELRE--FGFSTA 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID LE F AD+ T++IVM+GEIGG AEE AA ++++ KP+V Sbjct: 178 IGIGGDPIIGTTHIDALEAFQADDETDAIVMIGEIGGDAEERAAAYIQEHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 G+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + E++ SL Sbjct: 234 GYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSETAELMREIMRSL 293 >gi|110638791|ref|YP_679000.1| succinyl-CoA synthetase subunit alpha [Cytophaga hutchinsonii ATCC 33406] gi|110281472|gb|ABG59658.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [Cytophaga hutchinsonii ATCC 33406] Length = 293 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 152/299 (50%), Positives = 208/299 (69%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+KN+K++VQG TG GTFH +Q I Y T VVGG+ P KG + +++ P+F Sbjct: 1 MSVLVNKNSKIIVQGFTGTEGTFHAQQMIEY-GTNVVGGVTPGKGGS----SHLDRPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA +T A+ S+I+VPP+ A DAI+E+ + I +I+CITEGIPV DM+ KA + K Sbjct: 56 TVAEAVAKTGADVSIIFVPPAFAADAIMEAADGGIKVIICITEGIPVRDMIDAKAYVTKR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP+ K+GIMPG IF+KG +GI+S+SGTLTYEA Q + G G STA Sbjct: 116 KVTLIGPNCPGVITPEEAKVGIMPGFIFKKGRIGIVSKSGTLTYEAADQVVKAGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D T+ I+M+GEIGG E +AA+++K KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETDGIIMIGEIGGQLEGDAAKWIKAN----GTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA++ G A K+ M E GI + SPA IG ++ + + Sbjct: 232 GFIAGQTAPPGRRMGHAGAIVGGADDTAAAKMKIMAECGIHVVQSPADIGETMAKAMKK 290 >gi|284165338|ref|YP_003403617.1| succinyl-CoA synthetase, subunit alpha [Haloterrigena turkmenica DSM 5511] gi|284014993|gb|ADB60944.1| succinyl-CoA synthetase, alpha subunit [Haloterrigena turkmenica DSM 5511] Length = 290 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 155/299 (51%), Positives = 209/299 (69%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVD +T+V+VQG+TG G FH +Q + Y V G + P KG G VPV+ Sbjct: 1 MSVLVDDDTRVVVQGITGGEGKFHAKQMMEYGTNVVAGAV-PGKGGQEVEG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E A+ SVI+VPP+ AGDA+ ES++A++ L V ITEGIP DM RV RL ++ Sbjct: 56 TVHEAVEEENADTSVIFVPPAFAGDAVFESLDADLDLAVAITEGIPTQDMARVNKRLTET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP K+GI+PG+IF +G+VG++SRSGTLTY+ V + G+GQ+TA Sbjct: 116 DTRLIGPNCPGLITPGEAKLGILPGNIFAEGNVGLVSRSGTLTYQVVDSLTNRGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT+F+D LELF D T++IVM GEIGG EEEAA F+ D P+ Sbjct: 176 IGIGGDPIIGTDFVDALELFEDDPDTDAIVMCGEIGGEDEEEAAAFIDDYV----DTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPG+ MGHAGA++SG G G AE KI+A+ +AG+ + +P + + E L Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAESKISALNDAGVPVGDTPEEVADHIEEFLA 290 >gi|325954133|ref|YP_004237793.1| succinyl-CoA synthetase, subunit alpha [Weeksella virosa DSM 16922] gi|323436751|gb|ADX67215.1| succinyl-CoA synthetase, alpha subunit [Weeksella virosa DSM 16922] Length = 289 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 151/298 (50%), Positives = 206/298 (69%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV+K++K++VQG TGK GTFH EQ I Y V G ++ PVF Sbjct: 1 MAVLVNKDSKIIVQGFTGKEGTFHAEQMIEYGTQVVGGT-----TPGKGGTEHLGRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A+ S+I+VPP+ A DA++E+ +A I +I+CITEGIPV DMV+V+A +++ Sbjct: 56 TVREAVKETGADVSIIFVPPAFAADAVMEAADAGIRVIICITEGIPVEDMVKVQAYVDQR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++T K+GIMPG IF+ G VGI+S+SGTLTYEA Q + G G STA Sbjct: 116 DVTLIGPNCPGVITSGEAKVGIMPGFIFKPGKVGIVSKSGTLTYEAADQVVKAGYGISTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +ELF+ D TE IVM+GEIGG E EAA+++K+ KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELFMNDPETECIVMIGEIGGQLEAEAARWIKEH----GTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAP GRTMGHAGA++ G + A+ K+ M E GI + SPA IG ++ ++LG Sbjct: 232 GFIAGQTAPKGRTMGHAGAIVGGAEDTAQAKMKIMAECGIHVVESPAHIGETVAKVLG 289 >gi|284046984|ref|YP_003397324.1| succinyl-CoA synthetase, subunit alpha [Conexibacter woesei DSM 14684] gi|283951205|gb|ADB53949.1| succinyl-CoA synthetase, alpha subunit [Conexibacter woesei DSM 14684] Length = 291 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 146/300 (48%), Positives = 200/300 (66%), Gaps = 10/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVD +T+++V G+TG+ GTFH Y TQVV G+ P KG G +PVF Sbjct: 1 MSVLVDNDTRLVVTGITGREGTFHATNNKRY-GTQVVAGVTPGKGGQDVEG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+A++ ++ AN ++I+VPP A D+I+E+ +A I LI+ ITEGIP D +RV +L ++ Sbjct: 56 TIADSVDKAGANTAMIFVPPRFAADSILEAADAGIRLIIAITEGIPAHDELRVYTQLRRN 115 Query: 121 -SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RL+GPNCPGIL+P +GI+P S F+ G+VG++SRSGTLTY+ + +Q G G S+ Sbjct: 116 PDVRLVGPNCPGILSPGKASVGIIPASFFKPGNVGVVSRSGTLTYQIGNELAQRGFGNSS 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPV G+ FID++ELF D TE IVM GEIGGSAEEEAA + KP+ Sbjct: 176 IVGIGGDPVPGSSFIDIIELFEQDPETELIVMSGEIGGSAEEEAA----EYIAANVSKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V ++AG TAPPG+TMGHAGA++SG G A K A++ G+ + +P + LLGS Sbjct: 232 VAYIAGFTAPPGKTMGHAGAIVSGNAGTARAKAEALEAKGVKVGRTPTETAELAMSLLGS 291 >gi|296268641|ref|YP_003651273.1| succinyl-CoA synthetase subunit alpha [Thermobispora bispora DSM 43833] gi|296091428|gb|ADG87380.1| succinyl-CoA synthetase, alpha subunit [Thermobispora bispora DSM 43833] Length = 291 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 137/301 (45%), Positives = 196/301 (65%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + +N+K++VQG+TG GT HT + +L +VVGG++ +K G +PVF Sbjct: 1 MAIWLTENSKIIVQGMTGSEGTKHTRR-MLAAGAKVVGGVNARKAGIIHEG----LPVFG 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TV EA T A+ SV++VPP+ A++E+I+AEIPL V ITEG+PV D A + Sbjct: 56 TVKEAMAETGADVSVVFVPPAATKAAVMEAIDAEIPLCVVITEGVPVHDTTEFWAYAVSK 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI +P GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 116 GNKTRIIGPNCPGIASPGKSNAGIIPADITNPGPIGLVSKSGTLTYQLMYELRD--IGFS 173 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV GT ID L+ F D TE+IV++GEIGG AEE AA F++ KP Sbjct: 174 TCVGIGGDPVIGTTHIDALKAFQEDPETEAIVLIGEIGGDAEERAAAFIEKHV----TKP 229 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA+ISG G A+ K A+++ G+ + +P+ R + E++ Sbjct: 230 VVGYVAGFTAPEGKTMGHAGAIISGSSGTAQAKKEALEKVGVRVGRTPSETARIIREIIK 289 Query: 299 S 299 S Sbjct: 290 S 290 >gi|260591648|ref|ZP_05857106.1| succinyl-CoA synthetase subunit alpha [Prevotella veroralis F0319] gi|260536448|gb|EEX19065.1| succinyl-CoA synthetase subunit alpha [Prevotella veroralis F0319] Length = 290 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 140/299 (46%), Positives = 198/299 (66%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++KNT+++VQG+TG+ G+FH + Y T VVGG P K G +PVF Sbjct: 1 MSILINKNTRLIVQGITGRDGSFHASKMKEY-GTNVVGGTSPGKAGQEVCG----IPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T+ +A T AN S+I+VP A DA++E+I+ I L++CITEG+P LD V + + Sbjct: 56 TMKDAVAATQANTSIIFVPAPFAKDAMLEAIDGGIQLVICITEGVPTLDAVAAQHYAKVH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++IGPNCPG+++P+ GIMP +IF+KG G++SRSGTLTYE V +Q GLGQSTA Sbjct: 116 GVKVIGPNCPGLISPEESMAGIMPTNIFKKGHTGVISRSGTLTYEVVHNLTQAGLGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDPV G F ++L++F D T+SI ++GEIGG AEE AA+F+K+ KP+ Sbjct: 176 VGVGGDPVVGLYFEELLQMFQDDPETDSIALIGEIGGDAEERAAKFIKEHV----TKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F++G+ APPG+ MGHAGA+IS G G A +KI A + G+ +A + I L + + Sbjct: 232 VFISGQQAPPGKQMGHAGAIISSGSGSASEKIAAFEAVGVPVARETSEIPTLLKQQMKK 290 >gi|182416041|ref|YP_001821107.1| succinyl-CoA synthetase, alpha subunit [Opitutus terrae PB90-1] gi|177843255|gb|ACB77507.1| succinyl-CoA synthetase, alpha subunit [Opitutus terrae PB90-1] Length = 307 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 152/303 (50%), Positives = 207/303 (68%), Gaps = 12/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV TK+L+QG+TG+ G HT+ ++ Y TQVV G+ P KG ++ VP+F Sbjct: 1 MSILVTPETKILIQGITGEFGARHTKLSLDY-GTQVVAGVTPGKGGQFFEHNGAKVPIFN 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V +A T A S I+VPP A DA++E ++AE+ L V ITEGIPV DMVRVK ++ Sbjct: 60 SVKDAAAATGATVSAIFVPPPFAADAVLECVDAELALAVAITEGIPVRDMVRVKRVMQGR 119 Query: 121 SSRLIGPNCPGILTPDS-------CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R++GPNCPGI+TP + C+IGI PG I +KG VG++SRSGTLTYEAV+Q + Sbjct: 120 KTRVVGPNCPGIVTPGTGKDSSGGCRIGIAPGYIHKKGHVGVVSRSGTLTYEAVYQLTTR 179 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G+GQ+T+VGIGGDPV G+ +DV+++F D T I+M+GEIGG+AE EAA+++K Sbjct: 180 GIGQTTSVGIGGDPVNGSSHLDVIKMFNDDPETYGIIMIGEIGGNAEAEAARWIKANC-- 237 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KKP+ GF+AG TAP GR MGHAGAVI G + A KI KE GI +A +P+ + +L Sbjct: 238 --KKPVAGFIAGATAPAGRRMGHAGAVIGGKEDTAAAKIAIFKECGIEVAVTPSDMADAL 295 Query: 294 VEL 296 + Sbjct: 296 IRA 298 >gi|312136241|ref|YP_004003578.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methanothermus fervidus DSM 2088] gi|311223960|gb|ADP76816.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methanothermus fervidus DSM 2088] Length = 284 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 134/294 (45%), Positives = 194/294 (65%), Gaps = 11/294 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I++D+N + LVQG+TG+ G+FHT+Q + Y T++V G+ P KG G V V+ ++ Sbjct: 2 IILDENVRCLVQGITGRQGSFHTKQMLEY-GTKIVAGVTPGKGGKKVAG----VDVYNSI 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EAKE NAS+I+VP A DA E+I + L+V ITE + D + + + ++ Sbjct: 57 EEAKEHVDVNASIIFVPSQFAKDAAFEAI-KHLDLVVIITEHMVSHDTMEIIEYANRMNT 115 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PGI+TP K+GIMP IFR+G+VGI+SRSGTL YE + ++ G GQST +G Sbjct: 116 IVIGPNTPGIITPGVGKLGIMPHHIFREGNVGIVSRSGTLMYEFASKITEAGFGQSTCLG 175 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGD + G +F+DVL +F D T+ ++++GEIGG AEE AA+++ KP++ F Sbjct: 176 IGGDLITGLDFVDVLRMFEKDPDTDVVLLIGEIGGDAEERAAKYI-----NKMSKPVIAF 230 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +AG TAPPG+ MGHAGA+I GGKG AE KINA+K+AG + P+ + + E+ Sbjct: 231 IAGFTAPPGKRMGHAGAIIEGGKGTAESKINALKDAGAYVVKKPSEVVDIIREM 284 >gi|239927748|ref|ZP_04684701.1| succinyl-CoA synthetase subunit alpha [Streptomyces ghanaensis ATCC 14672] gi|291436088|ref|ZP_06575478.1| succinyl-coa synthetase alpha chain [Streptomyces ghanaensis ATCC 14672] gi|291338983|gb|EFE65939.1| succinyl-coa synthetase alpha chain [Streptomyces ghanaensis ATCC 14672] Length = 305 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 136/310 (43%), Positives = 188/310 (60%), Gaps = 18/310 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW----------- 49 M+I + K ++VLVQG+TG G HT + I T VVGG++P+K Sbjct: 1 MAIHLTKESRVLVQGMTGGEGMKHTRRMIA-AGTNVVGGVNPRKAGRRVDFDVPQSPNGP 59 Query: 50 TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 G VPVF +VAE + T A+ +V++VPP+ A A++E+ +A I L V ITEGIPV D Sbjct: 60 GGAPTAVPVFGSVAEGMDATGADVTVVFVPPAFAKHAVVEAADAGIGLAVVITEGIPVHD 119 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 V A +R+IGPNCPG++TP GI+P I G +G++S+SGTLTY+ + + Sbjct: 120 SVAFLAHARHKGTRVIGPNCPGLITPGQSNAGIIPADIAEPGRIGLVSKSGTLTYQLMHE 179 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 G ST VGIGGDPV GT ID L F D T+ IV++GEIGG AEE AA +++D Sbjct: 180 LRDT--GFSTCVGIGGDPVVGTTHIDCLAAFQDDPDTDLIVLIGEIGGDAEERAAAYIRD 237 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KP+VG++AG TAP GRTMGHAGA++SG G A+ K A++ AG+ + +P Sbjct: 238 HV----TKPVVGYIAGFTAPEGRTMGHAGAIVSGSSGTAQAKKEALEAAGVRVGRTPTET 293 Query: 290 GRSLVELLGS 299 R ++ L + Sbjct: 294 ARQVLAALDA 303 >gi|72162975|ref|YP_290632.1| succinyl-CoA synthetase subunit alpha [Thermobifida fusca YX] gi|71916707|gb|AAZ56609.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Thermobifida fusca YX] Length = 292 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 138/299 (46%), Positives = 194/299 (64%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KVLVQG+TG GT HT + +L T +VGG++P+K VPVF Sbjct: 1 MAIFLTKDSKVLVQGMTGSEGTKHTRR-MLAAGTNIVGGVNPRKAGQVVDFDGTQVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 +VAE + T A+ +VI+VPP A DA+IE+I+AEI L V ITEGIPV D A + Sbjct: 60 SVAEGMKATGADVTVIFVPPKFAKDAVIEAIDAEIGLAVVITEGIPVHDTATFWAHACSK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPADITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA+++K KP Sbjct: 178 TCVGIGGDPIIGTTHIDALAAFEADPDTDVIVMIGEIGGDAEERAAEYIKKHV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG++AG TAP G+TMGHAGA++SG G A K A++ G+ + +P+ + + L Sbjct: 234 VVGYIAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVKVGKTPSEAAKLVRSLF 292 >gi|29828359|ref|NP_822993.1| succinyl-CoA synthetase subunit alpha [Streptomyces avermitilis MA-4680] gi|29605462|dbj|BAC69528.1| putative succinyl-CoA synthetase alpha subunit [Streptomyces avermitilis MA-4680] Length = 299 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 137/299 (45%), Positives = 191/299 (63%), Gaps = 7/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KVLVQG+TG G HT + +L T VVGG++P+K VPVF Sbjct: 1 MAIYLTKESKVLVQGMTGGEGMKHTRR-MLAAGTDVVGGVNPRKAGRAVDFDERTVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V E +E T A+ +V++VPP+ A A++E+ +A I L V ITEGIPV D V A Sbjct: 60 SVREGREATGADVTVVFVPPAFAKAAVVEAADAGIALTVVITEGIPVHDAVAFHAYAAAK 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG+++P GI+P I + G +G++S+SGTLTY+ +++ +G ST Sbjct: 120 GTRIIGPNCPGLISPGQSNAGIIPADITKPGRIGLVSKSGTLTYQLMYELRD--IGFSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L F AD TE IV++GEIGG AEE AA +++D KP+V Sbjct: 178 VGIGGDPVVGTSHIDCLAAFEADPDTELIVLIGEIGGDAEERAAAYVRDHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G++AG TAP GRTMGHAGA++SG G A K A++ AG+ + +P R ++ L + Sbjct: 234 GYIAGFTAPEGRTMGHAGAIVSGSSGTARAKKEALEGAGVQVGGTPTATARLVLARLEA 292 >gi|257388753|ref|YP_003178526.1| succinyl-CoA synthetase, subunit alpha [Halomicrobium mukohataei DSM 12286] gi|257171060|gb|ACV48819.1| succinyl-CoA synthetase, alpha subunit [Halomicrobium mukohataei DSM 12286] Length = 289 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 145/298 (48%), Positives = 206/298 (69%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVD++T+V+VQG+TG G FHTEQ + Y V G + P +G G VPV+ Sbjct: 1 MSVLVDEDTRVVVQGITGGEGKFHTEQMMEYGTNVVAGAV-PGRGGQEVAG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A AN +V++VPP+ AGDA+ E+++A + L+V ITEGIP DM RVK + +++ Sbjct: 56 TVDRAAREENANTAVVFVPPAFAGDALFEALDAPVDLVVAITEGIPTQDMSRVKRKQDET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPNCPG++TP K+GI+PG+IF G VG++SRSGTLTY+ V + +GQSTA Sbjct: 116 DTHLVGPNCPGVITPGVAKLGILPGNIFSSGDVGLVSRSGTLTYQVVDNLTNRDIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT FID LELF AD T+++VM GEIGG EE+AA+++ + P+ Sbjct: 176 IGIGGDPIIGTSFIDALELFEADPDTKAVVMCGEIGGEDEEQAARYIGEHM----DTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G AE KI A++ G+ + +P + + ++L Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAESKIEALESNGVPVGDTPEEVVDHVEDIL 289 >gi|309811914|ref|ZP_07705686.1| succinyl-CoA synthetase, alpha subunit [Dermacoccus sp. Ellin185] gi|308434126|gb|EFP57986.1| succinyl-CoA synthetase, alpha subunit [Dermacoccus sp. Ellin185] Length = 299 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 144/304 (47%), Positives = 197/304 (64%), Gaps = 11/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT----GGNVNV 56 MSI ++ ++KV+VQG+TG G HT + +L T VVGG++PKK G V Sbjct: 1 MSIFLNADSKVIVQGMTGSEGMKHTAR-MLASGTNVVGGVNPKKAGQTVDFDVNGETKQV 59 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF +V +A T AN SVI+VPP A A +E+IEAE+PL V ITEGIPV D Sbjct: 60 PVFGSVKDAMAETGANVSVIFVPPPFAKSAAVEAIEAEMPLAVVITEGIPVKDSAEFYNL 119 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + S +RL+GPNCPGI++P GI+P +I KG +G++S+SGTLTY+ +++ G Sbjct: 120 SKGSKTRLLGPNCPGIISPGESNAGIIPANIAGKGRIGLVSKSGTLTYQMMYELRD--FG 177 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 STA+GIGGDPV GT ID LE F D T++IVM+GEIGG AEE AA ++K+ Sbjct: 178 FSTAIGIGGDPVIGTTHIDALEAFQNDPDTDAIVMIGEIGGDAEERAAAYIKENV----T 233 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ + E+ Sbjct: 234 KPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAAAKKEALEAAGVKVGKTPSETAALMTEI 293 Query: 297 LGSL 300 + +L Sbjct: 294 MNNL 297 >gi|312892445|ref|ZP_07751939.1| succinyl-CoA synthetase, alpha subunit [Mucilaginibacter paludis DSM 18603] gi|311295079|gb|EFQ72254.1| succinyl-CoA synthetase, alpha subunit [Mucilaginibacter paludis DSM 18603] Length = 292 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 160/300 (53%), Positives = 209/300 (69%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG GT+H Q I Y TQ+VGG+ P KG +++ PVF Sbjct: 1 MSVLVNKDSKVIVQGFTGNEGTYHASQMIEY-GTQLVGGVTPGKGGQ----SHLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A +T A+ S+I+VPP+ A DAI+E+ EA I +IVCITEGIP DMV+VK + Sbjct: 56 TVADAVAQTGADVSIIFVPPAFAADAIMEAAEAGIKVIVCITEGIPTKDMVQVKEYISDR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+T KIGIMPG IFRKG+VG++S+SGTLTYEAV Q + GLG +TA Sbjct: 116 DCRLIGPNCPGIITAGEAKIGIMPGFIFRKGNVGVVSKSGTLTYEAVDQVVKAGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D T I+M+GEIGG E EAA+++K+ KP+V Sbjct: 176 IGIGGDPIIGTPTKEAVELLMNDPETHGIIMIGEIGGGMEAEAARWIKEH----GTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GF+AG+TAP GR MGHAGA++ G A K+ M E GI + SPA IG ++ E L L Sbjct: 232 GFIAGQTAPAGRRMGHAGAIVGGADDTAAAKMKIMAECGIRVVESPAEIGAAMAEELAKL 291 >gi|190346572|gb|EDK38689.2| hypothetical protein PGUG_02787 [Meyerozyma guilliermondii ATCC 6260] Length = 404 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 168/301 (55%), Positives = 220/301 (73%), Gaps = 8/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V+ +TKV+ QG TG+ GTFH EQAI Y T++VGG +PKK + ++ PVF Sbjct: 105 NLKVNSDTKVIYQGFTGRQGTFHAEQAIAY-GTKIVGGTNPKKAGSTH----LDRPVFAN 159 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V++A + T ANA+ I+VPPS A AI E+IEAEI L V ITEGIP DMVR+ L+ +S Sbjct: 160 VSDAIKETGANATAIFVPPSIAAAAIEEAIEAEIELAVAITEGIPQHDMVRIAQMLKTQS 219 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ PD CKIGIMP I ++G VG++SRSGTLTYEAV QT+ GLGQS Sbjct: 220 KTRLVGPNCPGLIAPDQCKIGIMPSHIHQRGKVGVISRSGTLTYEAVAQTTGVGLGQSLV 279 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA--KRGRKKP 238 +G+GGDP GT FID L LFL D+ TE I+++GEIGG+AEEEA++FLK + KP Sbjct: 280 IGMGGDPFPGTNFIDALTLFLEDKETEGIILIGEIGGTAEEEASEFLKQHNLTRPDGPKP 339 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V F+AG +APPGR MGHAGA+ISGGKG A+ KI A++ AG+ + SPAR+G SL+E Sbjct: 340 VVSFIAGVSAPPGRRMGHAGAIISGGKGDAKSKIAALESAGVVVERSPARLGNSLLEEFK 399 Query: 299 S 299 + Sbjct: 400 N 400 >gi|255717731|ref|XP_002555146.1| KLTH0G02464p [Lachancea thermotolerans] gi|238936530|emb|CAR24709.1| KLTH0G02464p [Lachancea thermotolerans] Length = 326 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 149/304 (49%), Positives = 202/304 (66%), Gaps = 10/304 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + K+TKV++QG TGK TFH + + Y T +VGG +PKK G PVF T Sbjct: 28 NLRLTKDTKVIIQGFTGKQATFHAKLSQEY-GTNIVGGTNPKKAGQTHLGQ----PVFAT 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA ++T A A+ I+VPP A AI E+IEAEIPL V ITEGIP DM+ V L+ + Sbjct: 83 VAEAMKQTGATATGIFVPPPIAAKAIREAIEAEIPLAVSITEGIPQHDMLYVAEMLKSQQ 142 Query: 121 SSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI++P++ +IGI P IF+ G +GI+S+SGTLTYEAV QT+ GLGQ+ Sbjct: 143 KTRLVGPNCPGIISPEARVRIGIQPSRIFKPGKIGIVSKSGTLTYEAVQQTTITGLGQTL 202 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKP 238 +G+GGD GT+FID L+ F+ D ATE IVM+GEIGG AE EAAQFLK+ R P Sbjct: 203 VIGMGGDAFPGTDFIDTLKYFMEDPATEGIVMLGEIGGKAEIEAAQFLKEFNLTRSNPMP 262 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG A G MGH+GA++ G AE K A+++AG+ + SP +G++L++ Sbjct: 263 VASFIAGAVAGQMKGVRMGHSGAIVEGSGTDAESKKAALRDAGVAVVESPGHLGKALLDE 322 Query: 297 LGSL 300 L Sbjct: 323 FAKL 326 >gi|320532403|ref|ZP_08033241.1| succinyl-CoA synthetase subunit alpha [Actinomyces sp. oral taxon 171 str. F0337] gi|320135380|gb|EFW27490.1| succinyl-CoA synthetase subunit alpha [Actinomyces sp. oral taxon 171 str. F0337] Length = 313 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 139/314 (44%), Positives = 195/314 (62%), Gaps = 21/314 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--------- 51 MSI + +N +V+VQG+TG G HT + +L T+VV G++P+K T + Sbjct: 1 MSIFLTENDRVIVQGMTGSEGRKHTTR-MLSAGTKVVAGVNPRKAGTTVSFDVTPIGPGA 59 Query: 52 -----GNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G V VPV TVAEAKE T A SV++VPP+ A A++E+++A + L+V ITEGIP Sbjct: 60 GEVQAGTVEVPVHGTVAEAKEATGAEVSVVFVPPAFAKGAVVEAVDAGVRLVVVITEGIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D ++A ++IGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VADATWMRAYAADRGVQIIGPNCPGIISPARSNVGITPPDITGPGPLGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + S LG +T +GIGGDPV GT ID L F AD T +VM+GEIGG AEE AA + Sbjct: 180 MHELSD--LGFTTCIGIGGDPVVGTTHIDALAAFEADPDTRLVVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +++ KP+V +VAG TAP GRTMGHAGA++SG G A+ K A++ AG+ + +P Sbjct: 238 IREHM----TKPVVAYVAGFTAPEGRTMGHAGAIVSGSSGTADAKKIALEAAGVRVGRTP 293 Query: 287 ARIGRSLVELLGSL 300 ++ EL L Sbjct: 294 SQTAEIARELYRRL 307 >gi|254549932|ref|ZP_05140379.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 295 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 146/302 (48%), Positives = 197/302 (65%), Gaps = 14/302 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALA 293 Query: 294 VE 295 E Sbjct: 294 RE 295 >gi|307946998|ref|ZP_07662333.1| malate--CoA ligase subunit alpha [Roseibium sp. TrichSKD4] gi|307770662|gb|EFO29888.1| malate--CoA ligase subunit alpha [Roseibium sp. TrichSKD4] Length = 292 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 139/301 (46%), Positives = 192/301 (63%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++++T+V+VQG+TG+ FHT+ + Y V G + K G T VPVF Sbjct: 1 MSIYLNRDTRVIVQGITGRMAQFHTKDMLAYGTNVVGGVVPGKGGETVHG-----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 TV EA E T A+AS+++VPP A D+I+E+ +A I VCIT+GIP DM++VK + Sbjct: 56 TVKEAVEATQADASLVFVPPPFAADSIMEAADAGIRYCVCITDGIPAQDMIQVKRYMMRY 115 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ L GPNC G ++P +GIMPG IF G VGI+ RSGTL YEA Q + G+G Sbjct: 116 PKECRMVLTGPNCAGTISPGKAMLGIMPGHIFLPGHVGIVGRSGTLGYEAAAQLKERGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+LE F D+ T I M+GEIGG E EAA +++D Sbjct: 176 VSTSVGIGGDPINGSSFRDILEQFENDDDTHVIAMIGEIGGPQEAEAAAYIQDHVS---- 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V +VAG TAP GRTMGHAGA+IS A +K+ + AG+ +A +PA IG ++ + Sbjct: 232 KPVVAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILSGAGVTVAENPAVIGETIASV 291 Query: 297 L 297 + Sbjct: 292 M 292 >gi|257077171|ref|ZP_05571532.1| succinyl-CoA synthetase subunit alpha [Ferroplasma acidarmanus fer1] Length = 287 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 131/293 (44%), Positives = 181/293 (61%), Gaps = 10/293 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 +++ K TKV+VQG+TG G FH+ + I + T VV G+ P K T G V V+ V Sbjct: 5 VIISKETKVIVQGMTGHQGAFHSGEMIKF-GTNVVAGVSPGKAGTKVNG----VDVYNNV 59 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 A+ + +AS+I VP DA +E+IE I LI +TE +PV D + + + Sbjct: 60 ADTLD-LKPDASMISVPAPFVKDAALEAIENGIKLIYILTEHVPVHDTMELYHEARRKGV 118 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PGI KIGIMP +IFR G+V + SRSGTLTYE V + G G+ST +G Sbjct: 119 FMIGPNSPGITVAGQAKIGIMPNNIFRVGNVAVASRSGTLTYEIVKAVTDAGFGESTVIG 178 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GGDP+ GT F D++++F D T+ IV+VGEIGGS EE+AA+++K KKP+ G+ Sbjct: 179 LGGDPIIGTTFSDIIKIFNEDPQTKQIVLVGEIGGSEEEKAAEYIKKYV----KKPVTGY 234 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 + G +APPG+ MGHAGA+I G G A+ KI A K+AGI +A P I L + Sbjct: 235 ITGISAPPGKKMGHAGAIIEKGTGTADSKIKAFKDAGIKVANYPDDIPSLLQK 287 >gi|254231259|ref|ZP_04924586.1| succinyl-CoA synthetase (alpha chain) sucD [Mycobacterium tuberculosis C] gi|124600318|gb|EAY59328.1| succinyl-CoA synthetase (alpha chain) sucD [Mycobacterium tuberculosis C] Length = 298 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 146/302 (48%), Positives = 197/302 (65%), Gaps = 14/302 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVS- 239 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 240 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALA 296 Query: 294 VE 295 E Sbjct: 297 RE 298 >gi|149244140|ref|XP_001526613.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] gi|146449007|gb|EDK43263.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] Length = 323 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 173/301 (57%), Positives = 221/301 (73%), Gaps = 8/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+ QG TG+ GTFH EQAI Y T VVGGI+PKK ++ PVF T Sbjct: 24 NLKINKDTKVIFQGFTGRQGTFHAEQAIAY-GTDVVGGINPKKAGQTH----LDRPVFGT 78 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + A A+ I+VPP A AI E+I AEIPL V ITEGIP DMVRV L+ +S Sbjct: 79 VAEAMKEAGATATGIFVPPPLAAGAIEEAIAAEIPLAVAITEGIPQKDMVRVAQILKTQS 138 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI++PD CKIGIMP SIF++G VG++S+SGTLTYEAV QT+Q GLGQS Sbjct: 139 KTRLVGPNCPGIISPDQCKIGIMPQSIFKRGKVGVVSKSGTLTYEAVAQTTQVGLGQSLV 198 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA--KRGRKKP 238 +G+GGDP GT FID L LFL D TE I+++GEIGGSAEEEA++FLK + KP Sbjct: 199 IGMGGDPFPGTNFIDSLTLFLNDPETEGIILIGEIGGSAEEEASEFLKQHNLTRPEGAKP 258 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VGF+AG +APPGR MGHAGA+++GGKG A+ KI A++ AG+ + SPAR+G SL+ Sbjct: 259 VVGFIAGVSAPPGRRMGHAGAIVAGGKGDAKSKIAALEAAGVVVEKSPARLGNSLLAEFK 318 Query: 299 S 299 + Sbjct: 319 N 319 >gi|149279604|ref|ZP_01885733.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [Pedobacter sp. BAL39] gi|149229640|gb|EDM35030.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [Pedobacter sp. BAL39] Length = 290 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 156/299 (52%), Positives = 207/299 (69%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG GT+H Q I Y T +VGG+ P KG + PVF Sbjct: 1 MSVLVNKDSKVIVQGFTGNEGTYHASQMIEY-GTNLVGGVTPGKGGQTH----LERPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ++ AN S+I+VPP+ A DAI+E+ EA I +IVCITEGIP DM++VK + Sbjct: 56 TVKDAVDKAGANVSIIFVPPAFAADAIMEAAEAGIKVIVCITEGIPTKDMIQVKEYIADK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPGI+T D K+GIMPG IF+KG+VG++S+SGTLTYEAV Q + G+G +TA Sbjct: 116 DCRLIGPNCPGIITADEAKVGIMPGFIFKKGTVGVVSKSGTLTYEAVDQVVKAGMGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE I+M+GEIGG E EAA+++K+ KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETEGIIMIGEIGGGMEAEAARWIKEN----GTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAP GR MGHAGA++ G A K+ M E GI + SPA IG ++ ELL Sbjct: 232 GFIAGQTAPAGRRMGHAGAIVGGADDTAAAKMKIMAECGIRVVESPAEIGEAMAELLKK 290 >gi|332669628|ref|YP_004452636.1| succinyl-CoA synthetase subunit alpha [Cellulomonas fimi ATCC 484] gi|332338666|gb|AEE45249.1| succinyl-CoA synthetase, alpha subunit [Cellulomonas fimi ATCC 484] Length = 293 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 141/297 (47%), Positives = 201/297 (67%), Gaps = 7/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + + +KV+VQG+TG GT HT + +L T VVGG++P+K T + G+V+VPVF Sbjct: 1 MAIFLTEASKVIVQGMTGSEGTKHTTR-MLASGTNVVGGVNPRKAGTTQSFGDVDVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA E+T A+ SVI+VPP+ A++E+++A IPL+V ITEG+PV D + + Sbjct: 60 SVAEAIEKTGADVSVIFVPPAHTKGAVVEAVDAGIPLVVIITEGVPVADTAEFFSYAQAK 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNCPG+++P +GI+P I G VG++S+SGTLTY+ +++ G STA Sbjct: 120 GVRLVGPNCPGLISPGKSNVGIIPADITGPGRVGLVSKSGTLTYQMMYELRD--FGFSTA 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID L F AD TE IVM+GEIGG AEE AA ++++ KP+V Sbjct: 178 IGIGGDPIIGTTHIDALAAFEADPETEVIVMIGEIGGDAEERAAAYIREHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ ELL Sbjct: 234 GYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSETAALARELL 290 >gi|289580417|ref|YP_003478883.1| succinyl-CoA synthetase subunit alpha [Natrialba magadii ATCC 43099] gi|289529970|gb|ADD04321.1| succinyl-CoA synthetase, alpha subunit [Natrialba magadii ATCC 43099] Length = 290 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 157/299 (52%), Positives = 209/299 (69%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVD +T+V+VQG+TG G FH EQ I Y V G + P KG G VPV+ Sbjct: 1 MSVLVDDDTRVVVQGITGGEGKFHAEQMIEYGTNVVAGAV-PGKGGQEAAG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E A+ SVI+VPP+ AGDAI E++++E+ L V ITEGIP DM +V RL ++ Sbjct: 56 TVHEAVEEENADTSVIFVPPAFAGDAIFEALDSELDLAVAITEGIPTQDMAKVNKRLSET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPG++TP K+GI+PG+IF G VG++SRSGTLTY+ V + G+GQ+TA Sbjct: 116 DTRLIGPNCPGLITPGEAKLGILPGNIFSDGKVGLVSRSGTLTYQVVDNLTNRGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT+F+D LELF D+ TE+IVM GEIGG EEEAA F+ + P+ Sbjct: 176 IGIGGDPIIGTDFVDALELFENDDETEAIVMCGEIGGEDEEEAAAFIDEHV----DTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+AG+TAPPG+ MGHAGA++SG G G AE KI+A+ +AG+ + +P + + E LG Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAESKISALNDAGVPVGDTPEEVADHIEEFLG 290 >gi|297571845|ref|YP_003697619.1| succinyl-CoA synthetase, subunit alpha [Arcanobacterium haemolyticum DSM 20595] gi|296932192|gb|ADH93000.1| succinyl-CoA synthetase, alpha subunit [Arcanobacterium haemolyticum DSM 20595] Length = 306 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 141/311 (45%), Positives = 195/311 (62%), Gaps = 21/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--------- 51 MSI ++K++KV+VQG+TG G HT + +L T +V G +P+K T Sbjct: 1 MSIFLNKDSKVIVQGMTGSEGQKHTRR-MLGAGTTIVAGTNPRKAGTSVEFDVEPIGIGA 59 Query: 52 -----GNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G V++PV+ TVAEAKE T AN SVI+VPP+ A+IE+++A + L+V ITEG+P Sbjct: 60 EERQAGTVSIPVYGTVAEAKEATGANVSVIFVPPAFTKAAVIEAVDAGLELVVVITEGVP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D ++ RLIGPNCPGI+TP +GI P I G +G++S+SGTLTY+ Sbjct: 120 VKDSAEFFTYAQERGVRLIGPNCPGIITPGQSNVGITPPDITGSGRIGLVSKSGTLTYQM 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ S +G +T +GIGGDPV GT ID L+ F AD TE IVM+GEIGG AEE AA F Sbjct: 180 MYELSD--IGFTTCIGIGGDPVSGTTHIDALKAFEADPETELIVMIGEIGGDAEERAAAF 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +K+ KP+VG+VAG TAP G+TMGHAGA++SG G A K +A++ G+ + +P Sbjct: 238 IKEYV----TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAAAKKDALEAVGVKVGKTP 293 Query: 287 ARIGRSLVELL 297 +L Sbjct: 294 TEAANLARAIL 304 >gi|15826979|ref|NP_301242.1| succinyl-CoA synthetase subunit alpha [Mycobacterium leprae TN] gi|221229457|ref|YP_002502873.1| succinyl-CoA synthetase subunit alpha [Mycobacterium leprae Br4923] gi|4455692|emb|CAB36666.1| probable succinyl-CoA synthetase alpha subunit [Mycobacterium leprae] gi|13092526|emb|CAC29664.1| succinyl-CoA synthase [alpha] chain [Mycobacterium leprae] gi|219932564|emb|CAR70249.1| succinyl-CoA synthase [alpha] chain [Mycobacterium leprae Br4923] Length = 300 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 147/307 (47%), Positives = 203/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 M+I + K+ V+VQG+TG HT + +L TQ+VGG++ +K T T + + Sbjct: 1 MAIFLTKDNTVIVQGITGSEAAVHTAR-MLKAGTQIVGGVNARKAGTNVTHEDKHGRIIT 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TVAEA E T A+ S+I+VPP A +AIIE++EAEIPL+V ITEGIPV D V A Sbjct: 60 LPVFGTVAEAIENTGADVSIIFVPPRFAKEAIIEAVEAEIPLLVIITEGIPVQDSVYAWA 119 Query: 116 R--LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + + +R+IGPNCPGI+TP +GI P +I G +G++S+SGTLTY+ +F+ S Sbjct: 120 YNLNKGTKTRIIGPNCPGIITPGQSLVGITPATITGAGPIGLVSKSGTLTYQMMFELSD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTAIGIGGDPVIGTTHIDAIEAFEQDPDTKIIVMIGEIGGDAEERAADYIKANVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K +A++ AG+ + +P+ + Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAVKKDALEAAGVKVGKTPSETAVLV 293 Query: 294 VELLGSL 300 E+L +L Sbjct: 294 REILCTL 300 >gi|326771946|ref|ZP_08231231.1| succinyl-CoA synthetase subunit alpha [Actinomyces viscosus C505] gi|326638079|gb|EGE38980.1| succinyl-CoA synthetase subunit alpha [Actinomyces viscosus C505] Length = 313 Score = 271 bits (694), Expect = 6e-71, Method: Composition-based stats. Identities = 139/314 (44%), Positives = 195/314 (62%), Gaps = 21/314 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--------- 51 MSI + + +V+VQG+TG G HT + +L T+VV G++P+K T Sbjct: 1 MSIFLTETDRVIVQGMTGSEGRKHTTR-MLSAGTKVVAGVNPRKAGTTVAFDVAPIGPGA 59 Query: 52 -----GNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G V VPV+ TVAEAKE T A SV++VPP+ A A++E+++A + L+V ITEGIP Sbjct: 60 GEVQAGTVEVPVYGTVAEAKEATGAEVSVVFVPPAFAKGAVVEAVDAGVRLLVVITEGIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D ++A + ++IGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VADATWMRAYAAEHGVQIIGPNCPGIISPARSNVGITPPDITGPGPLGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + S LG +T +GIGGDPV GT ID L F AD T +VM+GEIGG AEE AA + Sbjct: 180 MHELSD--LGFTTCIGIGGDPVVGTTHIDALAAFEADPDTRLVVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +++ KP+V +VAG TAP GRTMGHAGA++SG G AE K A++ AG+ + +P Sbjct: 238 IREHM----TKPVVAYVAGFTAPEGRTMGHAGAIVSGSSGTAEAKKIALEAAGVRVGRTP 293 Query: 287 ARIGRSLVELLGSL 300 ++ EL L Sbjct: 294 SQTAEIARELYRQL 307 >gi|301057637|ref|ZP_07198715.1| succinyl-CoA synthetase, alpha subunit [delta proteobacterium NaphS2] gi|300448251|gb|EFK11938.1| succinyl-CoA synthetase, alpha subunit [delta proteobacterium NaphS2] Length = 290 Score = 271 bits (694), Expect = 6e-71, Method: Composition-based stats. Identities = 129/291 (44%), Positives = 184/291 (63%), Gaps = 9/291 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +D +T+V+VQG+TGK G+ T+ + Y T VVGG+ P KG G +PVF Sbjct: 1 MSIFLDDHTRVIVQGITGKIGSVQTKWMLEY-GTSVVGGVTPGKGGKTVQG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA + T ANASV +VP DA E+++A I LIV + E +PV D+++++A LE Sbjct: 56 SVAEAAKETGANASVFFVPAPFVLDAFYETVDAGIELIVIVPEHVPVHDVMKMRAYLEGK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +GP PGIL P K+GIMP S+F G GI+SRSGTL+YE S++ +GQST Sbjct: 116 DLVALGPTTPGILVPGKGKMGIMPASLFAPGRAGIISRSGTLSYEFAGILSEKNVGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+G DPV T D+L F D+ T+ +++VGE+GG EE+AA+F+ KKP+ Sbjct: 176 VGMGADPVVLTNLSDILREFEKDDETKGVIIVGEVGGEQEEQAAEFI----STRMKKPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 ++AG+ +PPG+ MGHAGA++ G G E K A++ AG+ + SP + Sbjct: 232 AYIAGRFSPPGKRMGHAGAIVRGSAGTFEGKCEALQAAGVTVLDSPVEVAD 282 >gi|312142574|ref|YP_003994020.1| succinyl-CoA synthetase, alpha subunit [Halanaerobium sp. 'sapolanicus'] gi|311903225|gb|ADQ13666.1| succinyl-CoA synthetase, alpha subunit [Halanaerobium sp. 'sapolanicus'] Length = 289 Score = 271 bits (694), Expect = 6e-71, Method: Composition-based stats. Identities = 139/298 (46%), Positives = 189/298 (63%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD NT+++VQG+TG+ G FH EQ + Y T VV G+ P KG G VPV+ Sbjct: 1 MSILVDDNTRLIVQGITGREGKFHAEQMLEY-GTNVVAGVTPGKGGQEVLG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E+ ANA+V++VPP + E+++A + L++ I EG+PV DM+ V +K Sbjct: 56 TVAEAVEKHDANATVLFVPPRFTKEGAFEAMDAGLKLVITIAEGVPVHDMLEVYHHSKKY 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + +IGPN G+++P K G M IF G V +LSRS T YE VF S G+GQSTA Sbjct: 116 GATVIGPNSFGVISPGKSKAGFMAHRIFSPGKVAVLSRSATNCYETVFMMSNRGIGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGD + G+ F+++L L D TE IV++GEIGGS EE AA+++K+ KP+V Sbjct: 176 IGIGGDMIPGSPFVEMLPLLEEDPDTEVIVLIGEIGGSDEEIAAEYIKENVS----KPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AGK AP +MGHAGA+++ G G AE+K +KEAG IA S I L E+L Sbjct: 232 ALIAGKNAPKDTSMGHAGAIVAPDGTGSAENKEKVLKEAGAYIAESTEGIVDILEEIL 289 >gi|319947697|ref|ZP_08021911.1| succinyl-CoA synthetase subunit alpha [Dietzia cinnamea P4] gi|319438647|gb|EFV93553.1| succinyl-CoA synthetase subunit alpha [Dietzia cinnamea P4] Length = 300 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 142/307 (46%), Positives = 203/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++K++KV+VQG+TG GT HT + +L TQ+VGG++ +K T G ++ Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHTAR-MLAAGTQIVGGVNARKAGTTVSHKDRDGNDIE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +V EA E T A+ ++++VPP DAIIE+++AEIPL V ITEG PVLD Sbjct: 60 LPVFGSVKEAMEATGADTTILFVPPPFTKDAIIEAVDAEIPLAVVITEGAPVLDTATAWN 119 Query: 116 R--LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +R+IGPNCPGI+TP +GI P +I KG VG++S+SGTLTY+ +++ + Sbjct: 120 YNLAKGGKTRIIGPNCPGIITPGESLVGITPANIAGKGPVGLVSKSGTLTYQMMYELAD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDP+ GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -YGFSTAIGIGGDPIIGTTHIDCIEAFENDPETKVIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAQLA 293 Query: 294 VELLGSL 300 E+L ++ Sbjct: 294 KEILDAM 300 >gi|146418184|ref|XP_001485058.1| hypothetical protein PGUG_02787 [Meyerozyma guilliermondii ATCC 6260] Length = 404 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 168/301 (55%), Positives = 220/301 (73%), Gaps = 8/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V+ +TKV+ QG TG+ GTFH EQAI Y T++VGG +PKK + ++ PVF Sbjct: 105 NLKVNLDTKVIYQGFTGRQGTFHAEQAIAY-GTKIVGGTNPKKAGSTH----LDRPVFAN 159 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V++A + T ANA+ I+VPPS A AI E+IEAEI L V ITEGIP DMVR+ L+ +S Sbjct: 160 VSDAIKETGANATAIFVPPSIAAAAIEEAIEAEIELAVAITEGIPQHDMVRIAQMLKTQS 219 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ PD CKIGIMP I ++G VG++SRSGTLTYEAV QT+ GLGQS Sbjct: 220 KTRLVGPNCPGLIAPDQCKIGIMPSHIHQRGKVGVISRSGTLTYEAVAQTTGVGLGQSLV 279 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA--KRGRKKP 238 +G+GGDP GT FID L LFL D+ TE I+++GEIGG+AEEEA++FLK + KP Sbjct: 280 IGMGGDPFPGTNFIDALTLFLEDKETEGIILIGEIGGTAEEEASEFLKQHNLTRPDGPKP 339 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V F+AG +APPGR MGHAGA+ISGGKG A+ KI A++ AG+ + SPAR+G SL+E Sbjct: 340 VVSFIAGVSAPPGRRMGHAGAIISGGKGDAKSKIAALESAGVVVERSPARLGNSLLEEFK 399 Query: 299 S 299 + Sbjct: 400 N 400 >gi|78042669|ref|YP_359762.1| succinyl-CoA synthetase subunit alpha [Carboxydothermus hydrogenoformans Z-2901] gi|77994784|gb|ABB13683.1| succinyl-CoA synthetase, alpha subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 289 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 128/297 (43%), Positives = 193/297 (64%), Gaps = 10/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I++ + T+++VQG+TG G FHT + + Y ++VV G+ P KG T G VPVF Sbjct: 1 MAIIITEETRIVVQGITGNQGRFHTGKMLEY-GSKVVAGVSPGKGGTEVLG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A + T AN S++++P DA +E++EA I IV I+E +P+ D +++ E Sbjct: 56 TVLDAVKNTGANTSILFIPAPFVLDAALEAMEAGIKTIVIISEHVPLHDALKIMRVAEAY 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++GPN G+++P K+GIMP +I++KG VGI++RSGTL+Y+ ++ ++ GLGQST Sbjct: 116 GVTVVGPNTFGVISPGIAKVGIMPNTIYQKGPVGIVARSGTLSYQIAYELTRAGLGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGD + G +V+ DE T+ IV+VGEIGG+AEEEAA+ ++ KP+V Sbjct: 176 VGLGGDRIVGLSLAEVILSLARDEETQGIVVVGEIGGTAEEEAAEVIRH-----INKPVV 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 F+AGKTAPPG+ MGHAGA+I G+G + KI+A+ AG IA P + + L Sbjct: 231 AFIAGKTAPPGKRMGHAGAIIERGRGTYQSKIDALWNAGALIAEVPWEVPVLMKSAL 287 >gi|156936880|ref|YP_001434676.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ignicoccus hospitalis KIN4/I] gi|156565864|gb|ABU81269.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Ignicoccus hospitalis KIN4/I] Length = 296 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 151/301 (50%), Positives = 203/301 (67%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M +LVD+NT+V+VQG+TG+ G FH EQ + Y T+VV G+ P KG G VPV+ Sbjct: 1 MVVLVDENTRVVVQGITGRYGKFHAEQMMKY-GTKVVAGVTPGKGGQEVLG----VPVYD 55 Query: 61 TVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EAKE N S+I+VP GA DAIIE+ +A + LIV ITEGIPV D +R Sbjct: 56 TVKEAKENHPEINTSIIFVPAGGAADAIIEAADAGLDLIVVITEGIPVHDSMRAIRYARS 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 S ++GPNCPG+++P K+GIMP F G VGI+SRSGTLTYE +Q S+ G+GQST Sbjct: 116 KGSTVVGPNCPGVISPGKAKVGIMPEKYFVPGRVGIVSRSGTLTYEIAYQLSKRGIGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDP+ G + ++ ++L D T+ IV++GEIGG AEE A +K + +KP+ Sbjct: 176 AIGIGGDPIIGLDTVEAVKLMDKDPETDLIVVIGEIGGDAEERLAAAIK---RGEIEKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V +VAG+TAPPG+ MGHAGA+IS G G AE K+ A +EAG+ +A P+++ +VE L Sbjct: 233 VAYVAGRTAPPGKRMGHAGAIISMGAGTAESKVRAFREAGVPVADIPSQVPDLVVEKLKE 292 Query: 300 L 300 L Sbjct: 293 L 293 >gi|271962789|ref|YP_003336985.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Streptosporangium roseum DSM 43021] gi|270505964|gb|ACZ84242.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Streptosporangium roseum DSM 43021] Length = 291 Score = 271 bits (693), Expect = 8e-71, Method: Composition-based stats. Identities = 135/301 (44%), Positives = 198/301 (65%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + +N+K++VQG+TG GT HT + +L +VVGG++ +K T G +PVF Sbjct: 1 MAIWLTENSKIIVQGMTGGEGTKHTRR-MLASGARVVGGVNARKAGTTHEG----LPVFG 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TV EA + T A+ SV++VPP+ DA+ E+I+AEIPL V ITEG+P+ D A + Sbjct: 56 TVVEAIKETGADVSVVFVPPAFTKDAVKEAIDAEIPLCVVITEGVPIHDTTEFWAYAVAK 115 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPGI +P + GI+P I G +G++S+SGTLTY+ +++ G S Sbjct: 116 GNKTRIIGPNCPGIASPGASNAGIIPADITTAGRIGLVSKSGTLTYQLMYELRD--FGFS 173 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV GT ID L+ F D T++IVM+GEIGG AEE AA +++ KP Sbjct: 174 TAVGIGGDPVIGTTHIDALQAFQDDPGTDAIVMIGEIGGDAEERAAAYIEQHV----TKP 229 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SG G A+ K A+++ G+ + +P+ R + E++ Sbjct: 230 VVAYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEKVGVRVGKTPSETARLMREVMQ 289 Query: 299 S 299 + Sbjct: 290 A 290 >gi|188587003|ref|YP_001918548.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351690|gb|ACB85960.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Natranaerobius thermophilus JW/NM-WN-LF] Length = 290 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 136/295 (46%), Positives = 192/295 (65%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKN+K+LVQG+TG G FHT Q + Y + VV G+ P KG G VPV+ Sbjct: 1 MAILLDKNSKILVQGITGYQGRFHTRQMLEY-GSNVVAGVSPGKGGQEVEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 + A A T AN S + VP S DA+ E+I+A + L+ ITE IPV D + + A + Sbjct: 56 SAASAVRETDANVSAVMVPASFGKDAVFEAIDAGMDLVAIITEHIPVQDAMEIMAFARER 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + +IGPN GI+TP K+GIMP ++ G G+++RSGTL+Y+ S+ G+GQSTA Sbjct: 116 GTTIIGPNTFGIITPGQSKLGIMPNESYQPGRTGLVARSGTLSYQIAEGLSRVGVGQSTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G+GGD V G+EFID+LE F D T+ +VMVGEIGG+AEEEAA+F+ + KP+ Sbjct: 176 IGLGGDRVVGSEFIDMLEHFEQDPGTDQVVMVGEIGGTAEEEAAEFIAN----KMTKPVY 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 ++AGK+APPG+ MGHAGA+I GKG + K+ A++ AG+ +A P + L + Sbjct: 232 AYIAGKSAPPGKRMGHAGAIIERGKGTFDSKVQALRSAGVEVASLPWELVEILKK 286 >gi|120405819|ref|YP_955648.1| succinyl-CoA synthetase subunit alpha [Mycobacterium vanbaalenii PYR-1] gi|119958637|gb|ABM15642.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Mycobacterium vanbaalenii PYR-1] Length = 300 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 148/307 (48%), Positives = 204/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++K++KV+VQG+TG GT HT+ +L TQ+VGG++ +K T G V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHTK-LMLKAGTQIVGGVNARKAGTTVKHEDKDGNEVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA + T A+ S+ +VPP+ + DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFASVAEAMKETGADVSIAFVPPAFSKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 YNVDKGQKTRIIGPNCPGIITPGESLVGITPNNITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKIIVMIGEIGGDAEERAADYIKANVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ + Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAKLA 293 Query: 294 VELLGSL 300 E+L L Sbjct: 294 REILAGL 300 >gi|325066868|ref|ZP_08125541.1| succinyl-CoA synthetase subunit alpha [Actinomyces oris K20] Length = 313 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 139/314 (44%), Positives = 195/314 (62%), Gaps = 21/314 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--------- 51 MSI + + +V+VQG+TG G HT + +L T+VV G++P+K T Sbjct: 1 MSIFLTETDRVIVQGMTGSEGRKHTTR-MLSAGTKVVAGVNPRKAGTTVAFDVAPIGPGA 59 Query: 52 -----GNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G V VPV+ TVAEAKE T A SV++VPP+ A A++E+++A + L+V ITEGIP Sbjct: 60 GEVQAGTVEVPVYGTVAEAKEATGAEVSVVFVPPAFAKGAVVEAVDAGVRLLVVITEGIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D ++A + ++IGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VADATWMRAYAAERGVQIIGPNCPGIISPARSNVGITPPDITGPGPLGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + S LG +T +GIGGDPV GT ID L F AD T +VM+GEIGG AEE AA + Sbjct: 180 MHELSD--LGFTTCIGIGGDPVVGTTHIDALAAFEADPDTRLVVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +++ KP+V +VAG TAP GRTMGHAGA++SG G AE K A++ AG+ + +P Sbjct: 238 IREHM----TKPVVAYVAGFTAPEGRTMGHAGAIVSGSSGTAEAKKIALEAAGVRVGRTP 293 Query: 287 ARIGRSLVELLGSL 300 ++ EL L Sbjct: 294 SQTAEIARELYRQL 307 >gi|163735508|ref|ZP_02142940.1| succinyl-CoA synthetase subunit alpha [Roseobacter litoralis Och 149] gi|161391128|gb|EDQ15465.1| succinyl-CoA synthetase subunit alpha [Roseobacter litoralis Och 149] Length = 295 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 137/303 (45%), Positives = 192/303 (63%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D++TKV++QG+TGK FHT+ + Y V G VPVF Sbjct: 1 MSILLDRDTKVIIQGITGKMARFHTKDMLEYGTRVVGGV-----VPGKGGETVEGVPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 TV EA +T A AS+++VPP A D+I+E+ +A I VCIT+GIP DM+RVK + Sbjct: 56 TVEEAVAQTGAEASLVFVPPPFAADSIMEAADAGIQYCVCITDGIPAQDMIRVKRYMYRY 115 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ L GPNC G ++P +GIMPG I+ +G+VGI+ RSGTL YEA Q + G+G Sbjct: 116 PKERRMVLTGPNCAGTISPGKALLGIMPGHIYLQGNVGIVGRSGTLGYEAAAQLKERGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+L+ F DE T I M+GEIGG E EAA++++ Sbjct: 176 VSTSVGIGGDPINGSSFKDILQRFEEDEDTHIIAMIGEIGGPQEAEAAEYIRTHI----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V +VAG TAP GRTMGHAGA+IS A +K+ + AG+ +A +PA IG ++ ++ Sbjct: 232 KPVVAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILSAAGVTVAENPAVIGETIAKV 291 Query: 297 LGS 299 + + Sbjct: 292 MEA 294 >gi|322370344|ref|ZP_08044903.1| succinyl-CoA synthetase, alpha subunit [Haladaptatus paucihalophilus DX253] gi|320550052|gb|EFW91707.1| succinyl-CoA synthetase, alpha subunit [Haladaptatus paucihalophilus DX253] Length = 289 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 154/298 (51%), Positives = 208/298 (69%), Gaps = 10/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVD +T+V+VQG+TG G+FHTEQ + Y V G + P KG G VPV+ Sbjct: 1 MSILVDDDTRVVVQGITGGEGSFHTEQMMEYGTNVVAGAV-PGKGGQEVQG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E A+ASVI+VPP+ AGDAI E+++ ++ L V ITEG+P DM +V RL ++ Sbjct: 56 TVNEAVEEEDADASVIFVPPAFAGDAIFEALDTDLDLAVAITEGVPTQDMSKVYKRLSET 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+TP K+GI+PG+IF G+VG++SRSGTLTY+ V +Q G+GQ+TA Sbjct: 116 DTRLLGPNCPGIITPGEAKLGILPGNIFESGNVGLVSRSGTLTYQVVDSLTQRGIGQTTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT+FID L LF D T+++VM GEIGG EEEAA P+ Sbjct: 176 IGIGGDPIIGTDFIDALSLFEDDPDTDAVVMCGEIGGEDEEEAA----AFIAENMDTPVA 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G AE KINA+ +AG+ + +P + ++ + L Sbjct: 232 GFIAGRTAPPGKRMGHAGAIVSGSGTGTAESKINALNDAGVPVGDTPEEVADNIEDFL 289 >gi|110678493|ref|YP_681500.1| succinyl-CoA synthetase subunit alpha [Roseobacter denitrificans OCh 114] gi|109454609|gb|ABG30814.1| Malate-CoA ligase, alpha subunit, putative [Roseobacter denitrificans OCh 114] Length = 295 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 138/303 (45%), Positives = 190/303 (62%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D +TKV+VQG+TGK FHT+ + Y V G VPVF Sbjct: 1 MSILLDSDTKVIVQGITGKMARFHTKDMLEYGTNVVGGV-----VPGKGGETVEGVPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 TV EA +T A AS+++VPP A D+I+E+ +A I VCIT+GIP DM+RVK + Sbjct: 56 TVEEAVAQTGAEASLVFVPPPFAADSIMEAADAGIQYCVCITDGIPAQDMIRVKRYMYRY 115 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ L GPNC G ++P +GIMPG I+ +G VGI+ RSGTL YEA Q + G+G Sbjct: 116 PKERRMVLTGPNCAGTISPGKALLGIMPGHIYLQGHVGIVGRSGTLGYEAAAQLKERGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+L+ F DE T I M+GEIGG E EAA++++ Sbjct: 176 VSTSVGIGGDPINGSSFKDILQRFEEDEDTHVIAMIGEIGGPQEAEAAEYIRAHV----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V +VAG TAP GRTMGHAGA+IS A +K+ + AG+ +A +PA IG ++ ++ Sbjct: 232 KPVVAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILSAAGVTVAENPAVIGETIAKV 291 Query: 297 LGS 299 + + Sbjct: 292 MEA 294 >gi|18313255|ref|NP_559922.1| succinyl-CoA synthetase alpha subunit (sucD) [Pyrobaculum aerophilum str. IM2] gi|18160775|gb|AAL64104.1| succinyl-CoA synthetase alpha subunit (sucD) [Pyrobaculum aerophilum str. IM2] Length = 293 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 131/301 (43%), Positives = 189/301 (62%), Gaps = 10/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV NTKV+VQG TG+ G+FH ++ + Y T+VV G+ P KG T G VPV+ Sbjct: 1 MTVLVGPNTKVVVQGATGREGSFHLQRMLEY-GTKVVAGVTPGKGGTTVHG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA R ANASVI+VP A DA++E+++A + L V ITE IPV + +R Sbjct: 56 TVEEAVRRHGANASVIFVPARFAADALLEAVDAGVELSVVITEHIPVHETLRAVNYARAR 115 Query: 121 SSRLIGPNCPGILTPD-SCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPGI+ P K+GIMP +I++ G + ++SRSGTLTYE +Q + G G + Sbjct: 116 GVTVIGPNCPGIVAPPVRTKLGIMPNNIYQTPGKIAVVSRSGTLTYEISYQLVRAGFGIN 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 A+G+GGDP+ G + ++ D + +V++GE+GG AEE A+ + KKP Sbjct: 176 VAIGVGGDPIVGLDLMEATLKVAEDPEVDGVVVIGEVGGDAEERLARLYAEGVI---KKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG+TAPPG+ MGHAGA++ G G A KI A + AG+ +A +P + + L +LL Sbjct: 233 VVAYVAGRTAPPGKRMGHAGAIVMLGSGDATSKIEAFRAAGVPVAETPFEVPQLLAKLLK 292 Query: 299 S 299 Sbjct: 293 K 293 >gi|296130373|ref|YP_003637623.1| succinyl-CoA synthetase, alpha subunit [Cellulomonas flavigena DSM 20109] gi|296022188|gb|ADG75424.1| succinyl-CoA synthetase, alpha subunit [Cellulomonas flavigena DSM 20109] Length = 292 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 142/299 (47%), Positives = 197/299 (65%), Gaps = 7/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + + +KV+VQG+TG G HT + +L T VVGG++P+K T T G+V VPVF Sbjct: 1 MAIFLTETSKVIVQGMTGSEGQKHTTR-MLASGTNVVGGVNPRKAGTSVTFGDVEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA E+T A+ SVI+VPP+ A+IE+++A IPL V ITEG+PV D A + Sbjct: 60 SVAEAIEKTGADVSVIFVPPAHTKAAVIEAVDAGIPLAVIITEGVPVADTAEFFAYAQAK 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG+++P +GI+P I G VG++S+SGTLTY+ +++ G STA Sbjct: 120 GVRLIGPNCPGLISPGKSNVGIIPADITGPGKVGLVSKSGTLTYQMMYELRD--FGFSTA 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID LE F D TE IVM+GEIGG AEE AA +++ KP+V Sbjct: 178 IGIGGDPIIGTTHIDALEAFEKDPETEVIVMIGEIGGDAEERAAAYIQAHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ +L + Sbjct: 234 GYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSETAALARAILSA 292 >gi|291003959|ref|ZP_06561932.1| succinyl-CoA synthetase subunit alpha [Saccharopolyspora erythraea NRRL 2338] Length = 294 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 136/300 (45%), Positives = 195/300 (65%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++ N+KV+VQG+TG GT HT + +L T +VGG++ +K + VF Sbjct: 1 MAIFLNDNSKVIVQGITGSEGTKHTAR-MLRAGTNIVGGVNARKAGQVVEIEGKQLTVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 +V EA + T A+ SV++VPP A DA+IE+I+AEIPL V ITEGIPV D A Sbjct: 60 SVQEAMKETGADVSVLFVPPKFAKDAVIEAIDAEIPLAVVITEGIPVHDSAYFWAHANAT 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R++GPNCPG+++P GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIVGPNCPGVISPGKSNAGIIPADITGPGKIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID L+ F D TE+IVM+GEIGG AEE AA ++K KP Sbjct: 178 TCVGIGGDPIIGTTHIDALQAFQDDPETEAIVMIGEIGGDAEERAADYIKANI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ + + E++G Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAKLMREVIG 293 >gi|254823467|ref|ZP_05228468.1| succinyl-CoA synthetase subunit alpha [Mycobacterium intracellulare ATCC 13950] Length = 300 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 150/307 (48%), Positives = 201/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT + TQVVGG++ +K T + G +V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHTALMM-KAGTQVVGGVNARKAGTTVSHVDPVGRDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TVAEA + T AN SV++VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGTVAEAMKETGANVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +R+IGPNCPGI+TP GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 YNVDKGQKTRIIGPNCPGIITPGEALAGITPANISGPGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G ST++GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTSIGIGGDPVIGTTHIDAIEAFEKDPDTKVIVMIGEIGGDAEERAADYIKANVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALA 293 Query: 294 VELLGSL 300 E+L +L Sbjct: 294 REILQNL 300 >gi|329945410|ref|ZP_08293173.1| succinyl-CoA synthetase, alpha subunit [Actinomyces sp. oral taxon 170 str. F0386] gi|328529032|gb|EGF55963.1| succinyl-CoA synthetase, alpha subunit [Actinomyces sp. oral taxon 170 str. F0386] Length = 313 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 139/314 (44%), Positives = 195/314 (62%), Gaps = 21/314 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGST------------- 47 MSI + + V+VQG+TG G HT + +L T+VV G++P+K T Sbjct: 1 MSIFLTETDSVIVQGMTGSEGRKHTTR-MLSAGTKVVAGVNPRKAGTAVAFDIAPIGPGA 59 Query: 48 -YWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G V VPV+ TVAEAKE T A SV++VPP+ A A++E+++A + L+V ITEGIP Sbjct: 60 GEVQSGTVEVPVYGTVAEAKEATGAEVSVVFVPPAFAKGAVVEAVDAGVRLVVVITEGIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D ++A + ++IGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VADATWMRAYAAERGVQIIGPNCPGIISPARSNVGITPPDITGPGPLGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + S LG +T +GIGGDPV GT ID L F AD T +VM+GEIGG AEE AA + Sbjct: 180 MHELSD--LGFTTCIGIGGDPVVGTTHIDALTAFEADPDTRLVVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +++ KP+V +VAG TAP GRTMGHAGA++SG G AE K A++ AG+ + +P Sbjct: 238 IREHM----TKPVVAYVAGFTAPEGRTMGHAGAIVSGSSGTAEAKKTALEAAGVRVGRTP 293 Query: 287 ARIGRSLVELLGSL 300 ++ EL +L Sbjct: 294 SQTAEIARELYRAL 307 >gi|323335536|gb|EGA76821.1| Lsc1p [Saccharomyces cerevisiae Vin13] Length = 329 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 151/303 (49%), Positives = 198/303 (65%), Gaps = 10/303 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ K+TKV+ QG TGK GTFH + Y T VVGG +PKK G PVF + Sbjct: 30 NLLLPKDTKVIFQGFTGKQGTFHASISQEY-GTNVVGGTNPKKAGQTHLGQ----PVFAS 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A AI ESIEAEIPL VCITEGIP DM+ + L+ + Sbjct: 85 VKDAIKETGATASAIFVPPPIAAAAIKESIEAEIPLAVCITEGIPQHDMLYIAEMLQTQD 144 Query: 121 SSRLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI+ P +IGI P IF+ G +GI+SRSGTLTYEAV QT++ LGQS Sbjct: 145 KTRLVGPNCPGIINPATKVRIGIQPPKIFQAGKIGIISRSGTLTYEAVQQTTKTDLGQSL 204 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKP 238 +G+GGD GT+FID L+LFL DE TE I+M+GEIGG AE EAAQFLK+ R + P Sbjct: 205 VIGMGGDAFPGTDFIDALKLFLEDETTEGIIMLGEIGGKAEIEAAQFLKEYNFSRSKPMP 264 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG A G MGH+GA++ G AE K A+++ G+ + SP +G++L++ Sbjct: 265 VASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKKALRDVGVXVVESPGYLGQALLDQ 324 Query: 297 LGS 299 Sbjct: 325 FAK 327 >gi|118469852|ref|YP_889761.1| succinyl-CoA synthetase subunit alpha [Mycobacterium smegmatis str. MC2 155] gi|118171139|gb|ABK72035.1| succinyl-CoA synthetase, alpha subunit [Mycobacterium smegmatis str. MC2 155] Length = 300 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 147/307 (47%), Positives = 204/307 (66%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQ+VGG++ +K T G ++ Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHTA-LMLKAGTQIVGGVNARKAGTTVSHKDKDGNDIE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA + T A+ S+ +VPP+ + DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAIKETGADVSIAFVPPAFSKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 YNVDKGQKTRIIGPNCPGIITPGEALVGITPNNITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ + Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAKLA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILQSL 300 >gi|260944128|ref|XP_002616362.1| hypothetical protein CLUG_03602 [Clavispora lusitaniae ATCC 42720] gi|238850011|gb|EEQ39475.1| hypothetical protein CLUG_03602 [Clavispora lusitaniae ATCC 42720] Length = 324 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 167/301 (55%), Positives = 217/301 (72%), Gaps = 8/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V+K+TKV+ QG TGK TFH EQAI Y T+VVGG +PKK T ++ PVF Sbjct: 25 NLKVNKDTKVIYQGFTGKQATFHAEQAIAY-GTKVVGGTNPKKAGTTH----LDRPVFAN 79 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A A+ I+VPP A AI E+IEAEI L V ITEGIP DMVR+ L+ +S Sbjct: 80 VRDAIKETGATATGIFVPPPIAAAAIEEAIEAEIELAVAITEGIPQHDMVRIAQILKTQS 139 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ PD CKIGIMP SI ++G VGI+SRSGTLTYEAV QT+ GLGQS Sbjct: 140 KTRLVGPNCPGLIAPDQCKIGIMPSSIHKRGRVGIISRSGTLTYEAVAQTTNVGLGQSLV 199 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA--KRGRKKP 238 +G+GGDP GT FID L L+L D TE I+++GEIGG+AEEEA++FLK + KP Sbjct: 200 IGMGGDPFPGTNFIDALTLYLNDPETEGIILIGEIGGTAEEEASEFLKQHNLTRPEGPKP 259 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V F+AG +APPGR MGHAGA+++GGKG A+ KI A++ AG+ + SPAR+G SL++ Sbjct: 260 VVSFIAGVSAPPGRRMGHAGAIVAGGKGDAKSKIAALESAGVVVEKSPARLGNSLLQEFK 319 Query: 299 S 299 + Sbjct: 320 N 320 >gi|256783948|ref|ZP_05522379.1| succinyl-CoA synthetase subunit alpha [Streptomyces lividans TK24] gi|289767830|ref|ZP_06527208.1| succinyl-coa synthetase subunit alpha [Streptomyces lividans TK24] gi|289698029|gb|EFD65458.1| succinyl-coa synthetase subunit alpha [Streptomyces lividans TK24] Length = 308 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 137/297 (46%), Positives = 188/297 (63%), Gaps = 7/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KVLVQG+TG G HT + +L T VVGG++P+K N VPVF Sbjct: 1 MAIYLTKESKVLVQGMTGAEGMKHTRR-MLAAGTDVVGGVNPRKAGRTVDFDNRTVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V E ERT A+ +V++VPP+ A A++E+ +A I L V ITEGIPV D V + A Sbjct: 60 SVREGIERTGADVTVVFVPPAFAEAAVVEAADAGIGLAVVITEGIPVHDSVALTAHARAK 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G ST Sbjct: 120 GTRVIGPNCPGLITPGQSNAGIIPPDITKPGRIGLVSKSGTLTYQLMYELRD--IGFSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L F D TE IV++GEIGG AEE AA ++ KP+V Sbjct: 178 VGIGGDPVVGTSHIDCLAAFEDDPDTELIVLIGEIGGDAEERAAAHIRAHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP GRTMGHAGA++SG G A K A++ G+ + +P R ++E L Sbjct: 234 AYIAGFTAPEGRTMGHAGAIVSGSSGTARAKKEALESVGVRVGSTPTETARHVLEAL 290 >gi|256272767|gb|EEU07738.1| Lsc1p [Saccharomyces cerevisiae JAY291] Length = 329 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 151/303 (49%), Positives = 198/303 (65%), Gaps = 10/303 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ K+TKV+ QG TGK GTFH + Y T VVGG +PKK G PVF + Sbjct: 30 NLLLPKDTKVIFQGFTGKQGTFHASISQEY-GTNVVGGTNPKKAGQTHLGQ----PVFAS 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A AI ESIEAEIPL VCITEGIP DM+ + L+ + Sbjct: 85 VKDAIKETGATASAIFVPPPIAAAAIKESIEAEIPLAVCITEGIPQHDMLYIAEMLQTQD 144 Query: 121 SSRLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI+ P +IGI P IF+ G +GI+SRSGTLTYEAV QT++ LGQS Sbjct: 145 KTRLVGPNCPGIINPATKVRIGIQPPKIFQAGKIGIISRSGTLTYEAVQQTTKTDLGQSL 204 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKP 238 +G+GGD GT+FID L+LFL DE TE I+M+GEIGG AE EAAQFLK+ R + P Sbjct: 205 VIGMGGDAFPGTDFIDALKLFLEDETTEGIIMLGEIGGKAEIEAAQFLKEYNFSRSKPMP 264 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG A G MGH+GA++ G AE K A+++ G+ + SP +G++L++ Sbjct: 265 VASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKQALRDVGVAVVESPGYLGQALLDQ 324 Query: 297 LGS 299 Sbjct: 325 FAK 327 >gi|312199953|ref|YP_004020014.1| succinyl-CoA synthetase, subunit alpha [Frankia sp. EuI1c] gi|311231289|gb|ADP84144.1| succinyl-CoA synthetase, alpha subunit [Frankia sp. EuI1c] Length = 290 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 137/301 (45%), Positives = 199/301 (66%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +D+N++++VQG+TG G+ H ++ + ++V G++ +K G VPVF Sbjct: 1 MAIWLDENSRIVVQGITGSEGSKHAKR-MAASGAKIVAGVNARKAGQSQDG----VPVFA 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA E+T A+ SVI+VPP DA +E+I+AEIPL V ITEG+PV D A + Sbjct: 56 SVAEAMEQTGADVSVIFVPPKFTKDAALEAIDAEIPLAVVITEGVPVHDTTSFFATAQAK 115 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +R+IGPNCPGI++P GI+P SI G +G++S+SGTLTY+ +++ G ST Sbjct: 116 GKTRIIGPNCPGIISPGKSNAGIIPASITPPGRIGLVSKSGTLTYQMMYELRD--FGFST 173 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPV GT ID L+ F AD T++IVM+GEIGG AEE AA ++ KP+ Sbjct: 174 GVGIGGDPVIGTIHIDALDAFEADPETDAIVMIGEIGGDAEERAAAHIEAHI----TKPV 229 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG+VAG TAP G+TMGHAGA++SG G A+ K A+++AG+ + +P+ R + +++ S Sbjct: 230 VGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEKAGVRVGKTPSETARLMADIMRS 289 Query: 300 L 300 L Sbjct: 290 L 290 >gi|156838644|ref|XP_001643024.1| hypothetical protein Kpol_440p13 [Vanderwaltozyma polyspora DSM 70294] gi|156113611|gb|EDO15166.1| hypothetical protein Kpol_440p13 [Vanderwaltozyma polyspora DSM 70294] Length = 328 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 148/304 (48%), Positives = 200/304 (65%), Gaps = 10/304 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ TKV+ QG TGK TFH E + Y T VVGG +PKK G PVF T Sbjct: 29 NLLIPNGTKVIFQGFTGKQATFHAEISQKY-GTDVVGGTNPKKAGQTHLGQ----PVFAT 83 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + T A AS I++PP A AI E++EAEIPL V +TEGIP DM+ + L+ + Sbjct: 84 VAEAVKETGATASGIFIPPPFAAAAIKEAVEAEIPLAVAVTEGIPQHDMLYIAEMLKSQD 143 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI+ P +IGI P SIF+ G +GI+S+SGTLTYEAV QT+ GLGQ+ Sbjct: 144 KTRLVGPNCPGIVNPVSKVRIGIQPTSIFKPGKIGIISKSGTLTYEAVQQTTLTGLGQTL 203 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKP 238 +G+GGD GT+FID L+LFL D+ATE I+M+GEIGG+AE EAA++LK+ R KP Sbjct: 204 VIGMGGDAFPGTDFIDSLQLFLEDDATEGIIMLGEIGGTAELEAAEYLKEFNNSRAVPKP 263 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG A G MGH+GA++ G AE K A+++ G+ + SP +G++L++ Sbjct: 264 VASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKRALRDVGVAVVESPGHLGKALLDQ 323 Query: 297 LGSL 300 L Sbjct: 324 FAKL 327 >gi|6324716|ref|NP_014785.1| Lsc1p [Saccharomyces cerevisiae S288c] gi|1711576|sp|P53598|SUCA_YEAST RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor gi|1164984|emb|CAA64059.1| YOR3352w [Saccharomyces cerevisiae] gi|1420358|emb|CAA99342.1| unnamed protein product [Saccharomyces cerevisiae] gi|285815021|tpg|DAA10914.1| TPA: Lsc1p [Saccharomyces cerevisiae S288c] Length = 329 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 151/303 (49%), Positives = 198/303 (65%), Gaps = 10/303 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ K+TKV+ QG TGK GTFH + Y T VVGG +PKK G PVF + Sbjct: 30 NLLLPKDTKVIFQGFTGKQGTFHASISQEY-GTNVVGGTNPKKAGQTHLGQ----PVFAS 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A AI ESIEAEIPL VCITEGIP DM+ + L+ + Sbjct: 85 VKDAIKETGATASAIFVPPPIAAAAIKESIEAEIPLAVCITEGIPQHDMLYIAEMLQTQD 144 Query: 121 SSRLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI+ P +IGI P IF+ G +GI+SRSGTLTYEAV QT++ LGQS Sbjct: 145 KTRLVGPNCPGIINPATKVRIGIQPPKIFQAGKIGIISRSGTLTYEAVQQTTKTDLGQSL 204 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKP 238 +G+GGD GT+FID L+LFL DE TE I+M+GEIGG AE EAAQFLK+ R + P Sbjct: 205 VIGMGGDAFPGTDFIDALKLFLEDETTEGIIMLGEIGGKAEIEAAQFLKEYNFSRSKPMP 264 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG A G MGH+GA++ G AE K A+++ G+ + SP +G++L++ Sbjct: 265 VASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKQALRDVGVAVVESPGYLGQALLDQ 324 Query: 297 LGS 299 Sbjct: 325 FAK 327 >gi|209885685|ref|YP_002289542.1| succinate-CoA ligase, alpha subunit subfamily [Oligotropha carboxidovorans OM5] gi|209873881|gb|ACI93677.1| succinate-CoA ligase, alpha subunit subfamily [Oligotropha carboxidovorans OM5] Length = 293 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 154/297 (51%), Positives = 205/297 (69%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVDK TKVL QG+TG AGT HT + + Y T+VV G+ P KG + +PV+ Sbjct: 1 MAILVDKETKVLCQGMTGWAGTHHTARMMEY-GTEVVAGVTPGKGGRTH----LELPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+AK T ANAS+I+VPP+ A A+IE+IEAE+PL+V +TE +P LDMVRV+ L+ S Sbjct: 56 TVAQAKAETGANASMIFVPPANAAKAMIEAIEAELPLVVVVTERVPALDMVRVRQALDGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPN GIL P+ CKIG+M R G VGI+SRS +LT E V Q S EGLGQST Sbjct: 116 KTRLVGPNSQGILAPEICKIGVMATGSERPGGVGIVSRSASLTSEVVAQISGEGLGQSTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ G + +ELFLAD TE IV++GEIGG+ E+E A++L+ R KP+V Sbjct: 176 VGVGGDPIHGMSMVQCVELFLADPETEGIVLIGEIGGTEEQEVAEYLQA---RKASKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG+ APP R MGH+G + G+G A KI A++ A + IAPS +GR++ + L Sbjct: 233 ALIAGQYAPPERRMGHSGTLTMYGRGDAGSKIAALERASVEIAPSSHLVGRTIRDAL 289 >gi|151945761|gb|EDN64002.1| ligase of succinyl-coa [Saccharomyces cerevisiae YJM789] gi|190407466|gb|EDV10733.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Saccharomyces cerevisiae RM11-1a] gi|207341121|gb|EDZ69263.1| YOR142Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|259149625|emb|CAY86429.1| Lsc1p [Saccharomyces cerevisiae EC1118] gi|323331502|gb|EGA72917.1| Lsc1p [Saccharomyces cerevisiae AWRI796] gi|323346554|gb|EGA80841.1| Lsc1p [Saccharomyces cerevisiae Lalvin QA23] gi|323352108|gb|EGA84645.1| Lsc1p [Saccharomyces cerevisiae VL3] Length = 329 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 151/303 (49%), Positives = 198/303 (65%), Gaps = 10/303 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ K+TKV+ QG TGK GTFH + Y T VVGG +PKK G PVF + Sbjct: 30 NLLLPKDTKVIFQGFTGKQGTFHASISQEY-GTNVVGGTNPKKAGQTHLGQ----PVFAS 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A AI ESIEAEIPL VCITEGIP DM+ + L+ + Sbjct: 85 VKDAIKETGATASAIFVPPPIAAAAIKESIEAEIPLAVCITEGIPQHDMLYIAEMLQTQD 144 Query: 121 SSRLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI+ P +IGI P IF+ G +GI+SRSGTLTYEAV QT++ LGQS Sbjct: 145 KTRLVGPNCPGIINPATKVRIGIQPPKIFQAGKIGIISRSGTLTYEAVQQTTKTDLGQSL 204 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKP 238 +G+GGD GT+FID L+LFL DE TE I+M+GEIGG AE EAAQFLK+ R + P Sbjct: 205 VIGMGGDAFPGTDFIDALKLFLEDETTEGIIMLGEIGGKAEIEAAQFLKEYNFSRSKPMP 264 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG A G MGH+GA++ G AE K A+++ G+ + SP +G++L++ Sbjct: 265 VASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKKALRDVGVAVVESPGYLGQALLDQ 324 Query: 297 LGS 299 Sbjct: 325 FAK 327 >gi|323302899|gb|EGA56703.1| Lsc1p [Saccharomyces cerevisiae FostersB] Length = 329 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 151/303 (49%), Positives = 198/303 (65%), Gaps = 10/303 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ K+TKV+ QG TGK GTFH + Y T VVGG +PKK G PVF + Sbjct: 30 NLLLPKDTKVIFQGFTGKQGTFHASISQEY-GTNVVGGTNPKKAGQTHLGQ----PVFAS 84 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A AS I+VPP A AI ESIEAEIPL VCITEGIP DM+ + L+ + Sbjct: 85 VKDAIKETGATASAIFVPPPIAAAAIKESIEAEIPLAVCITEGIPQHDMLYIAEMLQTQD 144 Query: 121 SSRLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI+ P +IGI P IF+ G +GI+SRSGTLTYEAV QT++ LGQS Sbjct: 145 KTRLVGPNCPGIINPATKVRIGIQPPKIFQAGKIGIISRSGTLTYEAVQQTTKTDLGQSL 204 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKP 238 +G+GGD GT+FID L+LFL DE TE I+M+GEIGG AE EAAQFLK+ R + P Sbjct: 205 VIGMGGDAFPGTDFIDALKLFLEDETTEGIIMLGEIGGKAEIEAAQFLKEYNFSRSKPMP 264 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG A G MGH+GA++ G AE K A+++ G+ + SP +G++L++ Sbjct: 265 VASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKKALRDVGVAVVESPGYLGQALLDQ 324 Query: 297 LGS 299 Sbjct: 325 FAK 327 >gi|50426799|ref|XP_461997.1| DEHA2G10384p [Debaryomyces hansenii CBS767] gi|49657667|emb|CAG90471.1| DEHA2G10384p [Debaryomyces hansenii] Length = 323 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 170/301 (56%), Positives = 220/301 (73%), Gaps = 8/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V+ +TKV+ QG TGK GTFH EQAI Y TQVVGG +PKK + +++ PVF T Sbjct: 24 NLKVNSDTKVIYQGFTGKQGTFHAEQAIAY-GTQVVGGTNPKKAGS----KHLDRPVFAT 78 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A + T A+A+ I+VPPS A AI E+IEAEI L V ITEGIP DMVR+ L+ +S Sbjct: 79 VKDAMKETGASATAIFVPPSIAAGAIEEAIEAEIALAVAITEGIPQHDMVRIAQMLKTQS 138 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P+ CKIGIMP I ++G VG++SRSGTLTYEAV QT+Q GLGQS Sbjct: 139 KTRLVGPNCPGIIAPEQCKIGIMPSHIHKRGKVGVISRSGTLTYEAVSQTTQVGLGQSLV 198 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA--KRGRKKP 238 +G+GGDP GT FID L LFL D TE I+++GEIGG+AEEEAA+FLK + KP Sbjct: 199 IGMGGDPFPGTNFIDALTLFLNDPETEGIILIGEIGGTAEEEAAEFLKQHNLTRPEGPKP 258 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V F+AG +APPGR MGHAGA+++GGKG A KI A++ AG+ + SPAR+G SL++ Sbjct: 259 VVSFIAGVSAPPGRRMGHAGAIVAGGKGDANSKIAALQSAGVVVEKSPARLGNSLLQEFK 318 Query: 299 S 299 + Sbjct: 319 N 319 >gi|119962638|ref|YP_946833.1| succinyl-CoA synthetase subunit alpha [Arthrobacter aurescens TC1] gi|119949497|gb|ABM08408.1| succinyl-CoA synthetase, alpha subunit [Arthrobacter aurescens TC1] Length = 300 Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 143/307 (46%), Positives = 201/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K++KV+VQG+TG GT HT +L T +VGG++ +K T G+ + VF Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHTA-LMLKAGTNIVGGVNARKAGTTVLHGDKEINVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 TV EA T A+ S+++VPP+ DA++E+IEA I L+V ITEG+PV D A + Sbjct: 60 TVKEAIAETGADVSIVFVPPAFTKDAVVEAIEAGIGLVVVITEGVPVQDSAEFWALAQSK 119 Query: 119 -----KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 K +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 VDADGKQITRIIGPNCPGIITPGEALVGITPANITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDP+ GT ID L F AD T++IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPIIGTTHIDALAAFEADPETKAIVMIGEIGGDAEERAADFIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + L Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAKLL 293 Query: 294 VELLGSL 300 E+ +L Sbjct: 294 REVYATL 300 >gi|300782734|ref|YP_003763025.1| succinyl-CoA synthetase alpha subunit [Amycolatopsis mediterranei U32] gi|299792248|gb|ADJ42623.1| succinyl-CoA synthetase alpha subunit [Amycolatopsis mediterranei U32] Length = 296 Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 142/302 (47%), Positives = 198/302 (65%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +++N+KV+VQGLTG G H + +L T +VGG++ +K T ++ VF Sbjct: 1 MSIFLNENSKVIVQGLTGSEGMKHATK-MLKSGTNIVGGVNARKAGQTVTIEGKDLKVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 TV EA + T A+ SVI+VPP A DA++E+I+AEIPL V ITEGIPV D A + Sbjct: 60 TVEEAIKETGADVSVIFVPPKFAKDAVLEAIDAEIPLAVVITEGIPVHDSAYFWAHAVAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +++R+IGPNCPG+++P GI+P I G++G++S+SGTLTY+ +++ +G S Sbjct: 120 GNTTRIIGPNCPGVISPGKSNAGIIPADITGPGNIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDP+ GT ID LE F AD T+ IVM+GEIGG AEE AA ++K KP Sbjct: 178 TAVGIGGDPIIGTTHIDALEAFEADPETKVIVMIGEIGGDAEERAAAYIKANV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ EL Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVRVGKTPSETAVLARELYN 293 Query: 299 SL 300 +L Sbjct: 294 NL 295 >gi|195569663|ref|XP_002102828.1| GD20111 [Drosophila simulans] gi|194198755|gb|EDX12331.1| GD20111 [Drosophila simulans] Length = 421 Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 152/272 (55%), Positives = 202/272 (74%), Gaps = 5/272 (1%) Query: 30 LYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE 89 + T +VGG++PKKG T G PVF +VAEA E+ +A+VI++PP A + I Sbjct: 138 IKYGTNIVGGVNPKKGGTEHLGK----PVFKSVAEAVEKAKPDATVIFIPPPSAAEGICA 193 Query: 90 SIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTPDSCKIGIMPGSIF 148 +IE+EI LIV ITEGIP DMVR+ L + SRL+GPNCPGI++PD CKIGIMPG I Sbjct: 194 AIESEIGLIVAITEGIPQSDMVRISQMLNCQEKSRLLGPNCPGIISPDQCKIGIMPGDIH 253 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 ++G VGI+SRSGTLTYE+V QT+ GLGQ+ VG+GGDP GT FID L++FL+D+ + Sbjct: 254 KRGVVGIVSRSGTLTYESVHQTTNVGLGQALCVGLGGDPFNGTSFIDALKVFLSDKEIKG 313 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 IVM+GEIGGSAEE+AA FLK++ KP+VGF+AG+TAPPGR MGHAGA+ISGGKG A Sbjct: 314 IVMIGEIGGSAEEDAADFLKEKNTGCEAKPVVGFIAGQTAPPGRRMGHAGAIISGGKGAA 373 Query: 269 EDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 +DK+ A+++AG+ + +P +G +L+E + L Sbjct: 374 KDKVAALEKAGVRMTANPCHLGSTLLEEMIRL 405 >gi|269796096|ref|YP_003315551.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Sanguibacter keddieii DSM 10542] gi|269098281|gb|ACZ22717.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Sanguibacter keddieii DSM 10542] Length = 296 Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 138/303 (45%), Positives = 201/303 (66%), Gaps = 11/303 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG----GNVNV 56 M+I + +++KV+VQG+TG G HT + +L T +VGG++P+K T T +V+V Sbjct: 1 MAIFITEDSKVIVQGMTGSEGQKHTTR-MLASGTNIVGGVNPRKAGTSVTFPKGESSVDV 59 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF +VA+A T A+ SVI+VPP+ A++E+IEA IPL+V ITEG+PV D Sbjct: 60 PVFGSVADAMTETGADVSVIFVPPAFTKAAVVEAIEAGIPLVVIITEGVPVKDTAEFFTL 119 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ RLIGPNCPG+++P +GI+P +I G +G++S+SGTLTY+ +++ G Sbjct: 120 AQERGVRLIGPNCPGLISPGLSNVGIIPANITGAGKIGLVSKSGTLTYQMMYELRD--FG 177 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 STA+GIGGDP+ GT ID LE F AD T +IVM+GEIGG AEE AA ++ + Sbjct: 178 FSTAIGIGGDPIIGTTHIDALEAFEADPETAAIVMIGEIGGDAEERAAAYIAEHV----T 233 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + E+ Sbjct: 234 KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSETASLMREI 293 Query: 297 LGS 299 L + Sbjct: 294 LSA 296 >gi|126437271|ref|YP_001072962.1| succinyl-CoA synthetase subunit alpha [Mycobacterium sp. JLS] gi|126237071|gb|ABO00472.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Mycobacterium sp. JLS] Length = 300 Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 148/306 (48%), Positives = 201/306 (65%), Gaps = 14/306 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQ+VGG++ +K T G +V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHTA-LMLKAGTQLVGGVNARKAGTTVSHVDKDGKDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +V EA + T A+ SV++VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVGEAMKETGADVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +R+IGPNCPGI+TP GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 YNVEKGQKTRIIGPNCPGIITPGEALAGITPANITGSGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++KD Sbjct: 179 -FGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKDNVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ + Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAQLA 293 Query: 294 VELLGS 299 E+L + Sbjct: 294 REILQN 299 >gi|108801290|ref|YP_641487.1| succinyl-CoA synthetase subunit alpha [Mycobacterium sp. MCS] gi|119870441|ref|YP_940393.1| succinyl-CoA synthetase subunit alpha [Mycobacterium sp. KMS] gi|108771709|gb|ABG10431.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Mycobacterium sp. MCS] gi|119696530|gb|ABL93603.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Mycobacterium sp. KMS] Length = 300 Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 147/306 (48%), Positives = 201/306 (65%), Gaps = 14/306 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQ+VGG++ +K T G +V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHTA-LMLKAGTQLVGGVNARKAGTTVSHVDKDGKDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +V +A + T A+ SV++VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVGDAMKETGADVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +R+IGPNCPGI+TP GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 YNVEKGQKTRIIGPNCPGIITPGEALAGITPANITGSGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++KD Sbjct: 179 -FGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKVIVMIGEIGGDAEERAADYIKDNVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ + Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAQLA 293 Query: 294 VELLGS 299 E+L + Sbjct: 294 REILQN 299 >gi|255530598|ref|YP_003090970.1| succinyl-CoA synthetase subunit alpha [Pedobacter heparinus DSM 2366] gi|255343582|gb|ACU02908.1| succinyl-CoA synthetase, alpha subunit [Pedobacter heparinus DSM 2366] Length = 290 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 157/299 (52%), Positives = 205/299 (68%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG GT+H Q I Y T VVGG+ P KG PVF Sbjct: 1 MSVLVNKDSKVIVQGFTGNEGTYHASQMIEY-GTNVVGGVTPGKGGQTHLDK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ++ AN S+I+VPP+ A DAI+E+ EA I +IVCITEGIP DM++VK + Sbjct: 56 TVKDAVDKAGANVSIIFVPPAFAADAIMEAAEAGIKVIVCITEGIPTKDMIQVKEYISDR 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIGPNCPG++T D KIGIMPG IF+KG+VG++S+SGTLTYEAV Q + GLG +TA Sbjct: 116 DCRLIGPNCPGVITADEAKIGIMPGFIFKKGTVGVVSKSGTLTYEAVDQVVKAGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D TE I+M+GEIGG E EAA+++K KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETEGIIMIGEIGGGMEAEAARWIKAN----GTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAP GR MGHAGA++ G + A K+ M E GI + SPA IG ++ LL Sbjct: 232 GFIAGQTAPAGRRMGHAGAIVGGAEDTAAAKMKIMAECGIHVVESPAEIGAAMAALLKK 290 >gi|326334135|ref|ZP_08200362.1| succinyl-CoA synthetase, alpha subunit [Nocardioidaceae bacterium Broad-1] gi|325948111|gb|EGD40224.1| succinyl-CoA synthetase, alpha subunit [Nocardioidaceae bacterium Broad-1] Length = 298 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 150/305 (49%), Positives = 206/305 (67%), Gaps = 12/305 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG G HT +L Q+VGG++ +K T T G +V Sbjct: 1 MSIYLNKDSKVIVQGITGGMGAKHTA-LMLDSGAQIVGGVNARKAGTTVTHKDAQGADVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TVAEA + T AN SV++VPP+ DA IE+I+AE+PLIV ITEG+PV D V + Sbjct: 60 LPVFGTVAEAMKETGANVSVLFVPPAFTKDAAIEAIDAEMPLIVVITEGVPVQDTAEVWS 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 L+ ++R+IGPNCPGI+TP GI P +I KG VG++S+SGTLTY+ +++ Sbjct: 120 YLQGKATRMIGPNCPGIITPGESLAGITPHTITGKGPVGLVSKSGTLTYQMMYELKD--F 177 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G STA+GIGGDP+ GT ID LE F D+ T+ IVM+GEIGG AEE AA ++K+ Sbjct: 178 GFSTAIGIGGDPIIGTTHIDALEAFEKDDETKLIVMIGEIGGDAEERAAAYIKENIS--- 234 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ E Sbjct: 235 -KPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAALARE 293 Query: 296 LLGSL 300 +L SL Sbjct: 294 ILQSL 298 >gi|50308181|ref|XP_454091.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643226|emb|CAG99178.1| KLLA0E03235p [Kluyveromyces lactis] Length = 318 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 145/301 (48%), Positives = 199/301 (66%), Gaps = 10/301 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L++ +TKV+ QG TGK TFH + + Y T +VGG +PKK G PVF + Sbjct: 23 NLLLNHDTKVIFQGFTGKQATFHAKISQEY-GTNIVGGTNPKKAGQVHLGQ----PVFAS 77 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + T A A+ I+VPPS A AI E+IEA+IPL V ITEGIP DM+ + L+ + Sbjct: 78 VAEAVKETGATATGIFVPPSIAAPAIKEAIEAQIPLAVAITEGIPQHDMLYIAEMLKSQD 137 Query: 121 SSRLIGPNCPGILTPDS-CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI++P + C+IGI P SIF+ G +GI+S+SGTLTYEAV QT+ LGQS Sbjct: 138 KTRLVGPNCPGIISPSARCRIGIQPTSIFKPGKIGIVSKSGTLTYEAVQQTTITDLGQSL 197 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKP 238 +GIGGD GT+FID L LFL D TE I+++GEIGG+AE EAA++LK R + P Sbjct: 198 VIGIGGDAFPGTDFIDALTLFLNDPQTEGIILLGEIGGTAEIEAAEYLKSYNLTREKPLP 257 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG A G MGH+GA++ G AE K A++ A + + SP +G++L++ Sbjct: 258 VASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKKALRSANVAVVESPGHLGKALLDQ 317 Query: 297 L 297 Sbjct: 318 F 318 >gi|284029244|ref|YP_003379175.1| succinyl-CoA synthetase subunit alpha [Kribbella flavida DSM 17836] gi|283808537|gb|ADB30376.1| succinyl-CoA synthetase, alpha subunit [Kribbella flavida DSM 17836] Length = 296 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 141/301 (46%), Positives = 196/301 (65%), Gaps = 8/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI + K++KV+VQG+TG GT HT + +L T +VGG++P+K VPVF Sbjct: 1 MSIFLTKDSKVIVQGMTGSEGTKHTTR-MLASGTNIVGGVNPRKAGESVDFDGKPVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 VA+A + T AN SV++VPP DA++E+IEAE+PL+V ITEG+PV D A + S Sbjct: 60 GVADAIKETGANVSVVFVPPKFTKDAVLEAIEAEMPLVVVITEGVPVHDTAAFFAAAQAS 119 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +R+IGPNCPGI+TP GI+P I G +G++S+SGTLTY+ +++ G ST Sbjct: 120 GKTRIIGPNCPGIITPGESNAGIIPADIAGPGRIGLVSKSGTLTYQMMYELRD--FGFST 177 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDP+ GT ID L F D T++IVM+GEIGG AEE AA F+K+ KP+ Sbjct: 178 AIGIGGDPIIGTTHIDALRAFQDDPDTDAIVMIGEIGGDAEERAAAFIKENV----TKPV 233 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG+VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P+ + E++ Sbjct: 234 VGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAVGVKVGKTPSETANLMREIMQE 293 Query: 300 L 300 L Sbjct: 294 L 294 >gi|325962278|ref|YP_004240184.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Arthrobacter phenanthrenivorans Sphe3] gi|323468365|gb|ADX72050.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Arthrobacter phenanthrenivorans Sphe3] Length = 300 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 141/307 (45%), Positives = 199/307 (64%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K++KV+VQG+TG GT HT +L T +VGG++ +K T G+ + VF Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHTA-LMLKAGTNIVGGVNARKAGTTVLHGDKEITVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 TV EA T A+ S+++VPP+ A++E+IEA I L+V ITEG+PV D A + Sbjct: 60 TVKEAMAETGADVSIVFVPPAFTKAAVVEAIEAGIGLVVVITEGVPVQDSAEFWALAQSK 119 Query: 119 -----KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 VDADGNQVTRIIGPNCPGIITPGESLVGITPANITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDP+ GT ID L F AD T++IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPIIGTTHIDALAAFEADPETKAIVMIGEIGGDAEERAADFIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + L Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAKLL 293 Query: 294 VELLGSL 300 E+ +L Sbjct: 294 REVYAAL 300 >gi|296118632|ref|ZP_06837210.1| succinyl-CoA synthetase subunit alpha [Corynebacterium ammoniagenes DSM 20306] gi|295968531|gb|EFG81778.1| succinyl-CoA synthetase subunit alpha [Corynebacterium ammoniagenes DSM 20306] Length = 302 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 134/301 (44%), Positives = 194/301 (64%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGG-NVNVPVF 59 M+I +D N+K++VQG+TG G HT Q +L + +VGG++PKK + +PVF Sbjct: 1 MAIYLDSNSKIIVQGMTGSEGMKHT-QRMLGSGSNIVGGVNPKKAGETVSFETGEKIPVF 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EA + T AN SVI+VP A+ E+I A IPL + ITEG+PV D A ++ Sbjct: 60 GTVREAIQATGANVSVIFVPAKFTKAAVEEAIYANIPLAIVITEGVPVKDTAEFFALAKE 119 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSI-FRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S++R+IGPNCPGI+TP GI+P GS+G++S+SGTLTY+ +++ S +G S Sbjct: 120 SNTRIIGPNCPGIITPGQSNAGIIPAETAPEPGSIGLVSKSGTLTYQMMYELSD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT I +E F D T++I+M+GEIGG AEE AA ++ + A KP Sbjct: 178 TCVGIGGDPIIGTTHIAAIEEFQKDPDTKAIMMIGEIGGDAEEYAANYIAEYA----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V ++AG TAP G+TMGHAGA++SG G A K A++ AG+ + +P++ + + E L Sbjct: 234 VVAYIAGFTAPEGKTMGHAGAIVSGSSGTAAGKKRALEAAGVRVGRTPSQAAQLMREALE 293 Query: 299 S 299 + Sbjct: 294 A 294 >gi|296169712|ref|ZP_06851329.1| succinyl-CoA synthetase subunit alpha [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895609|gb|EFG75306.1| succinyl-CoA synthetase subunit alpha [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 300 Score = 268 bits (684), Expect = 8e-70, Method: Composition-based stats. Identities = 151/307 (49%), Positives = 201/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQVVGG++ +K T + G +V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHTA-LMLKAGTQVVGGVNARKAGTTVSHVDPVGKDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TVAEA + T AN SV +VPP A DA+IE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGTVAEAMKETGANVSVGFVPPKFAKDAMIEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +R+IGPNCPGI+TP GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 YNVDKGQKTRIIGPNCPGIITPGEALAGITPANISGPGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G ST++GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTSIGIGGDPVIGTTHIDAIEAFEKDPDTKVIVMIGEIGGDAEERAADYIKANVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVRVGKTPSETAALA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILQSL 300 >gi|297559045|ref|YP_003678019.1| succinyl-CoA synthetase, subunit alpha [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843493|gb|ADH65513.1| succinyl-CoA synthetase, alpha subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 292 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 137/299 (45%), Positives = 193/299 (64%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++K++KVLVQG+TG GT HT + +L T +VGG++P+K VPVF Sbjct: 1 MAIFLNKDSKVLVQGMTGSEGTKHTRR-MLASGTTIVGGVNPRKAGQKVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAE T A+ +VI+VPP + +A+ E+I+AEI L V ITEGIPV D A + Sbjct: 60 SVAEGMAATGADVTVIFVPPKFSREAVFEAIDAEIGLAVVITEGIPVHDTAAFWAHAQAK 119 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPSDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA+F++D KP Sbjct: 178 SAVGIGGDPIIGTTHIDALAAFEADPDTDVIVMIGEIGGDAEERAAEFIRDNV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +VG+VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P+ + L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVKVGKTPSETAQLARALF 292 >gi|320101246|ref|YP_004176838.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Desulfurococcus mucosus DSM 2162] gi|319753598|gb|ADV65356.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Desulfurococcus mucosus DSM 2162] Length = 292 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 138/300 (46%), Positives = 196/300 (65%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M +LVD T+V+VQG+TG+ G+FHT+ + Y T++V G P KG +Y G VPV+ Sbjct: 1 MGVLVDSATRVVVQGVTGREGSFHTKLMLEY-GTRIVAGTSPGKGGSYVHG----VPVYN 55 Query: 61 TVAEAKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 ++ EA A +AS+++VP AGDA+ E+++ + +V ITEGIP+ D +R Sbjct: 56 SIWEAVREQGAVDASIVFVPARFAGDAVYEAVDNGVRTVVVITEGIPLHDELRFVNYARS 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GPN PG++T K+GIMP +F+ G VGI+SRSGTLTYE + S+ G G ST Sbjct: 116 RGVVVVGPNTPGVMTVGEAKLGIMPAHVFKPGRVGIVSRSGTLTYEIARELSKHGYGVST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +G+GGDPV G +FID +LF AD T+++V+VGEIGG AEE A F A+R KP+ Sbjct: 176 VLGLGGDPVTGLDFIDAAKLFFADSGTDALVVVGEIGGDAEERFAGFYAGLAER---KPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V +VAG+TAPPG+ MGHAGA+IS G G K +++EAGI +A +P+++ L LL Sbjct: 233 VAYVAGRTAPPGKRMGHAGAIISMGMGDYASKRRSLEEAGIPVAETPSQVPVLLGRLLKR 292 >gi|68475125|ref|XP_718448.1| hypothetical protein CaO19.10866 [Candida albicans SC5314] gi|68475666|ref|XP_718181.1| hypothetical protein CaO19.3358 [Candida albicans SC5314] gi|46439937|gb|EAK99249.1| hypothetical protein CaO19.3358 [Candida albicans SC5314] gi|46440213|gb|EAK99522.1| hypothetical protein CaO19.10866 [Candida albicans SC5314] Length = 323 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 169/301 (56%), Positives = 217/301 (72%), Gaps = 8/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V K+TKV+ QG TGK TFH EQAI Y T VVGGI+P+K T ++ PVF T Sbjct: 24 NLKVTKDTKVIYQGFTGKQATFHAEQAIAY-GTDVVGGINPRKAGTTH----LDRPVFGT 78 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + A+A+ I+VPP A AI E+I AEIPL V ITEGIP DMVR+ L+ + Sbjct: 79 VAEAMKEAGASATGIFVPPPLAAAAIEEAIAAEIPLAVAITEGIPQKDMVRISQILKTQE 138 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ PD CKIGIMP SI ++G VG++S+SGTLTYEAV QT+ GLGQS Sbjct: 139 KTRLVGPNCPGLIAPDQCKIGIMPSSIHQRGKVGVISKSGTLTYEAVAQTTAVGLGQSLV 198 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA--KRGRKKP 238 +G+GGDP GT FID L L+L D TE I+M+GEIGGSAEEEA++FLK + KP Sbjct: 199 IGMGGDPFPGTNFIDALTLYLNDPETEGIIMIGEIGGSAEEEASEFLKQHNLTRPEGPKP 258 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VGF+AG +APPGR MGHAGA+++GGKG A+ KI A++ AG+ + SPAR+G SL+ Sbjct: 259 VVGFIAGVSAPPGRRMGHAGAIVAGGKGDAKSKIAALESAGVVVEKSPARLGNSLLAEFK 318 Query: 299 S 299 + Sbjct: 319 N 319 >gi|255730485|ref|XP_002550167.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240132124|gb|EER31682.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 323 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 168/301 (55%), Positives = 217/301 (72%), Gaps = 8/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK TFH EQAI Y TQVVGGI+P+K T ++ PVF T Sbjct: 24 NLKINSDTKVIYQGFTGKQATFHAEQAIAY-GTQVVGGINPRKAGTTH----LDRPVFGT 78 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + A A+ I+VPP A AI E+I AEIPL V ITEGIP DMVR+ L+ + Sbjct: 79 VAEAMKEAGATATGIFVPPPLAAAAIEEAITAEIPLAVAITEGIPQKDMVRIAQILKTQD 138 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG+++PD CKIGIMP I ++G VGI+SRSGTLTYEAV QT+ GLGQS Sbjct: 139 KTRLVGPNCPGVISPDQCKIGIMPSQIHQRGKVGIISRSGTLTYEAVAQTTAVGLGQSLV 198 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA--KRGRKKP 238 +G+GGDP GT FID L LFL D+ TE I+++GEIGGSAEEEA++FLK + KP Sbjct: 199 IGMGGDPFPGTNFIDALTLFLNDKETEGIILIGEIGGSAEEEASEFLKQYNLTRPEGPKP 258 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V F+AG +APPGR MGHAGA+++GGKG A+ KI A++ AG+ + SPAR+G+SL Sbjct: 259 VVSFIAGVSAPPGRRMGHAGAIVAGGKGDAKSKIAALESAGVVVEKSPARLGKSLHAEFK 318 Query: 299 S 299 + Sbjct: 319 N 319 >gi|241948219|ref|XP_002416832.1| succinyl-coa ligase [GDP-forming] alpha-chain, mitochondrial precursor, putative; succinyl-coa synthetase, alpha chain, putative [Candida dubliniensis CD36] gi|223640170|emb|CAX44417.1| succinyl-coa ligase [GDP-forming] alpha-chain, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 323 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 168/301 (55%), Positives = 217/301 (72%), Gaps = 8/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V K+T+V+ QG TGK TFH EQAI Y T VVGGI+P+K T ++ PVF T Sbjct: 24 NLKVTKDTRVIYQGFTGKQATFHAEQAIAY-GTNVVGGINPRKAGTTH----LDRPVFGT 78 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + A+A+ I+VPP A AI E+I AEIPL V ITEGIP DMVR+ L+ + Sbjct: 79 VAEAIKEAGASATGIFVPPPLAAAAIEEAIAAEIPLAVAITEGIPQKDMVRIAQILKTQD 138 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPG++ PD CKIGIMP SI ++G VG++S+SGTLTYEAV QT+ GLGQS Sbjct: 139 KTRLVGPNCPGLIAPDQCKIGIMPSSIHKRGKVGVISKSGTLTYEAVAQTTAVGLGQSLV 198 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA--KRGRKKP 238 +G+GGDP GT FID L L+L D TE I+M+GEIGGSAEEEA++FLK + KP Sbjct: 199 IGMGGDPFPGTNFIDALTLYLNDPETEGIIMIGEIGGSAEEEASEFLKQHNLTRPEGPKP 258 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VGF+AG +APPGR MGHAGA+++GGKG A+ KI A++ AG+ + SPAR+G SL+ Sbjct: 259 VVGFIAGVSAPPGRRMGHAGAIVAGGKGDAKSKIAALESAGVVVEKSPARLGNSLLAEFK 318 Query: 299 S 299 + Sbjct: 319 N 319 >gi|255262162|ref|ZP_05341504.1| succinate-CoA ligase, alpha subunit subfamily [Thalassiobium sp. R2A62] gi|255104497|gb|EET47171.1| succinate-CoA ligase, alpha subunit subfamily [Thalassiobium sp. R2A62] Length = 292 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 137/301 (45%), Positives = 189/301 (62%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +++ T+V+VQG+TG+ FHT+ + Y V G + K G T VPVF Sbjct: 1 MSIYLNRETRVIVQGITGRMAQFHTKDMLEYGTNVVGGVVPGKGGETVHG-----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 TV EA E T A AS+++VPP A D+I+E+ +A I VCIT+GIP DM++VK + Sbjct: 56 TVKEAVEATQAEASLVFVPPPFAADSIMEAADAGIRYCVCITDGIPAQDMIQVKRYMMRY 115 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ L GPNC G ++P +GIMPG IF G+VGI+ RSGTL YEA Q + G+G Sbjct: 116 PKERRMVLTGPNCAGTISPGKAMLGIMPGHIFLPGNVGIVGRSGTLGYEAAAQLKERGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+L F D T I M+GEIGG E EAA ++++ Sbjct: 176 VSTSVGIGGDPINGSSFRDILAQFENDGDTHVIAMIGEIGGPQEAEAAAYIQEHV----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V +VAG TAP GRTMGHAGA+IS A +K+ + AG+ +A +PA IG ++ + Sbjct: 232 KPVVAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILTAAGVTVAENPAVIGETIASV 291 Query: 297 L 297 + Sbjct: 292 M 292 >gi|238879344|gb|EEQ42982.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Candida albicans WO-1] Length = 323 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 168/301 (55%), Positives = 216/301 (71%), Gaps = 8/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V K+TKV+ QG TGK TFH EQAI Y T VVGGI+P+K T ++ PVF T Sbjct: 24 NLKVTKDTKVIYQGFTGKQATFHAEQAIAY-GTDVVGGINPRKAGTTH----LDRPVFGT 78 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + A+A+ I+VPP A AI E+I AEIPL V ITEGIP DMVR+ L+ + Sbjct: 79 VAEAMKEAGASATGIFVPPPLAAAAIEEAIAAEIPLAVAITEGIPQKDMVRISQILKTQE 138 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R +GPNCPG++ PD CKIGIMP SI ++G VG++S+SGTLTYEAV QT+ GLGQS Sbjct: 139 KTRFVGPNCPGLIAPDQCKIGIMPSSIHQRGKVGVISKSGTLTYEAVAQTTAVGLGQSLV 198 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA--KRGRKKP 238 +G+GGDP GT FID L L+L D TE I+M+GEIGGSAEEEA++FLK + KP Sbjct: 199 IGMGGDPFPGTNFIDALTLYLNDPETEGIIMIGEIGGSAEEEASEFLKQHNLTRPEGPKP 258 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VGF+AG +APPGR MGHAGA+++GGKG A+ KI A++ AG+ + SPAR+G SL+ Sbjct: 259 VVGFIAGVSAPPGRRMGHAGAIVAGGKGDAKSKIAALESAGVVVEKSPARLGNSLLAEFK 318 Query: 299 S 299 + Sbjct: 319 N 319 >gi|158317721|ref|YP_001510229.1| succinyl-CoA synthetase subunit alpha [Frankia sp. EAN1pec] gi|158113126|gb|ABW15323.1| succinyl-CoA synthetase, alpha subunit [Frankia sp. EAN1pec] Length = 290 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 139/301 (46%), Positives = 195/301 (64%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +D+N++V+VQG+TG G+ HT + +L T+VV G++ +K G VPVF Sbjct: 1 MAIWLDENSRVVVQGITGGEGSKHTRR-MLAAGTKVVAGVNARKVGQQVEG----VPVFG 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VA+A T AN SVI+VPP DA IE+++A IPL V ITEG+PV D A + Sbjct: 56 SVADAMAETGANVSVIFVPPRFTKDAAIEAVDAAIPLAVVITEGVPVHDTTEFFAYSQSK 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + R+IGPNCPGI +P GI+P I G +G++S+SGTLTY+ +++ + G ST Sbjct: 116 GTTRIIGPNCPGIASPGVSNAGIIPADITPGGRIGLVSKSGTLTYQMMYELRE--FGFST 173 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPV GT ID L+ F AD T++IVM+GEIGG AEE AA + KP+ Sbjct: 174 CVGIGGDPVIGTTHIDALDAFQADPGTDAIVMIGEIGGDAEERAAAHIDAHV----TKPV 229 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG+VAG TAP G+TMGHAGA++SG G A+ K A+++AG+ + +P R + +++ S Sbjct: 230 VGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEKAGVRVGKTPTETARLMADIMRS 289 Query: 300 L 300 L Sbjct: 290 L 290 >gi|48478074|ref|YP_023780.1| succinyl-CoA synthetase subunit alpha [Picrophilus torridus DSM 9790] gi|48430722|gb|AAT43587.1| succinyl-CoA synthetase alpha chain [Picrophilus torridus DSM 9790] Length = 284 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 130/293 (44%), Positives = 186/293 (63%), Gaps = 10/293 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 +L+++NT+V++QG+TG G+FH+ + +L T +V G+ P KG + N+PV+ T+ Sbjct: 2 VLINRNTRVIIQGITGHQGSFHSGE-MLKFGTNIVAGVSPGKGGSKIN----NIPVYDTI 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E + +A++I VP DA +E+I+ I I +TE +PV D + + + ++ + Sbjct: 57 DEVMD-LKPDATMISVPAPFVKDAALEAIDHGIKFIYILTEHVPVQDTMEIVNQAKRKNI 115 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +IGPN PGI KIGIMP +IFRKG V + SRSGTLTYE V +Q GLG+ST +G Sbjct: 116 FMIGPNGPGITVVGESKIGIMPNNIFRKGRVAVASRSGTLTYEIVNAITQAGLGESTVIG 175 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GGDP+ GT F +V+ +F D T+ IVMVGEIGGS EE AA K KK +VG+ Sbjct: 176 LGGDPIVGTTFTEVVRIFNEDPETDMIVMVGEIGGSEEERAA----SYVKEHVKKKVVGY 231 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 + G++APPG+ MGHAGA+I G G AE KI A + AGI +A P +I L + Sbjct: 232 ITGRSAPPGKRMGHAGAIIEKGAGTAESKIRAFESAGIKVAEYPYQIPDLLKQ 284 >gi|307128645|ref|YP_003880675.1| succinyl-CoA synthetase subunit alpha [Candidatus Sulcia muelleri CARI] gi|306483107|gb|ADM89977.1| succinyl-CoA synthetase, alpha subunit [Candidatus Sulcia muelleri CARI] Length = 291 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 152/294 (51%), Positives = 203/294 (69%), Gaps = 9/294 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K +K++VQG TGK G+FH+++ I Y T ++GG+ P ++ PVF Sbjct: 1 MSILVNKFSKIIVQGFTGKEGSFHSKKMISY-GTPIIGGVTP----GKGGKKHLGKPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TV EA ++ AN S+I+VPP A DAIIESI++ I +IVCITEGIP+ DM+++K + K Sbjct: 56 TVEEAVKKLNANVSIIFVPPMFAYDAIIESIDSGIKIIVCITEGIPISDMLKIKNYINFK 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 LIGPNCPGI+TP+ K+GIMPG IF+KG VGI+S+SGTLTYEA Q + G G ST Sbjct: 116 KKCLLIGPNCPGIITPNEAKVGIMPGFIFKKGRVGIVSKSGTLTYEAADQIVKSGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDP+ GT ++ F D T+ IVM+GEIGG E +AA+++ + KKP+ Sbjct: 176 AVGIGGDPIIGTTMKYIISEFFNDSETDIIVMIGEIGGKLEIDAAKWI---KNKKNKKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 +GF+AG TAP GRTMGHAGA+I A KIN +K GI I SP++IG ++ Sbjct: 233 LGFIAGHTAPKGRTMGHAGAIIGNKNDTAIYKINILKNCGIHIVKSPSQIGNAV 286 >gi|254512676|ref|ZP_05124742.1| succinyl-CoA ligase [GDP-forming] subunit alpha-2 [Rhodobacteraceae bacterium KLH11] gi|221532675|gb|EEE35670.1| succinyl-CoA ligase [GDP-forming] subunit alpha-2 [Rhodobacteraceae bacterium KLH11] Length = 295 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 144/296 (48%), Positives = 200/296 (67%), Gaps = 8/296 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI VD NT+V+VQG+TG+AGTF+T+QA+ Y T V G + P KG T +++P+F Sbjct: 1 MSIFVDANTRVIVQGMTGRAGTFYTDQAVRYGSTYVGG-VRPGKGGTRH----LDMPMFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA T ANAS++ VP A +A+IE+IEA I +IVC+TE +P DM RVKA LE + Sbjct: 56 TVAEAMTETGANASLVIVPAPHAAEAMIEAIEAGIGVIVCVTERVPQHDMSRVKAALEGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPN GILTP+ CKIG+MP + GSVGI SRS +LT E + Q S+ G+GQST Sbjct: 116 DCVLIGPNSQGILTPEQCKIGVMPTRNAQPGSVGIASRSASLTSEILAQFSKAGMGQSTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGD + G +F++ L+ F D TE++V++GEIGG +EE+AA++L+ KP++ Sbjct: 176 VGIGGDTLHGVDFVECLKRFRDDAETEAVVLIGEIGGRSEEDAAEYLR---SVDYGKPVI 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 V G+ AP GR MGHAG + G A++KI ++ AG+ IA + + S+++ Sbjct: 233 ALVVGRHAPKGRRMGHAGTLSVLGGDSAQEKIANLRNAGVFIADNADDVVASVLQA 288 >gi|320334599|ref|YP_004171310.1| succinyl-CoA synthetase subunit alpha [Deinococcus maricopensis DSM 21211] gi|319755888|gb|ADV67645.1| succinyl-CoA synthetase, alpha subunit [Deinococcus maricopensis DSM 21211] Length = 301 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 140/310 (45%), Positives = 201/310 (64%), Gaps = 20/310 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++++T+VLV G+TG+ G HT+ A+ T+VV G+ P KG G +PV+ Sbjct: 1 MSILINQDTQVLVVGMTGREGANHTK-AMREFGTKVVAGVTPGKGGQTHEG----LPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 +V EA+ + +AS+I+VPP+GA DA++ES A +PLI+ ITEG+P +DM+R ++ Sbjct: 56 SVGEAQAQHQIDASIIFVPPAGAADAVLESAYAGVPLIILITEGVPTVDMMRAVQEVKTL 115 Query: 119 --------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQ 169 RLIG NCPG+++ KIGIMP I++ KG +G++SRSGTLTYEA Sbjct: 116 NAQSLEQGGKGVRLIGGNCPGLVSSGEAKIGIMPNRIYQQKGRIGLISRSGTLTYEAGKL 175 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 GLG ST VGIGGDPV GT F DVL LF D T++IV++GEIGG+ EE AA+++++ Sbjct: 176 LLDAGLGTSTTVGIGGDPVIGTTFADVLPLFEQDPDTDAIVVIGEIGGADEEAAAEYIQN 235 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KKP+V F++G++AP G+ MGHAGA+I G G E K+ A K A + +A + I Sbjct: 236 HM----KKPVVAFISGRSAPAGKRMGHAGAIIMGNVGTPESKLAAFKAANVPVADTMPEI 291 Query: 290 GRSLVELLGS 299 + ++L Sbjct: 292 IDLVKQVLNK 301 >gi|298528735|ref|ZP_07016139.1| succinyl-CoA synthetase, alpha subunit [Desulfonatronospira thiodismutans ASO3-1] gi|298512387|gb|EFI36289.1| succinyl-CoA synthetase, alpha subunit [Desulfonatronospira thiodismutans ASO3-1] Length = 692 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 134/293 (45%), Positives = 190/293 (64%), Gaps = 8/293 (2%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 ++KNT VLVQG+TG+ G H + + T++V G+ P KG ++ G VPVF +V + Sbjct: 408 LNKNTPVLVQGITGREGMLHARE-MQNFGTRIVAGVTPFKGGSHVEG----VPVFDSVHK 462 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 A ASVI+VP + A DA++E+++ IP +VCITEGIP DM+R+ + +S +RL Sbjct: 463 ACMEHDIQASVIFVPGAAAADAVMEAVDMHIPWVVCITEGIPQQDMMRLLPAIRRSGTRL 522 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPN PGI+ P K+GIMP SIF +G V ILSRSGTLTYE V + G+GQ +G+G Sbjct: 523 VGPNTPGIMVPGQTKLGIMPASIFSRGPVAILSRSGTLTYECVQSLTSAGMGQCMCLGVG 582 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 GDP G +F D+ L D A +++++GEIGG+AEE+ A+ L + G KP++GFVA Sbjct: 583 GDPYVGLDFRDIFPLLQRDPACRAVLVLGEIGGTAEEDLARELDEM---GFDKPVLGFVA 639 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G+TAPPG+ +GHAGA++ GG K+ M E GI I P A I + ++L Sbjct: 640 GQTAPPGKRLGHAGAILDEHSGGIRAKLQVMHECGITICPDLASIPAMVEKVL 692 >gi|30249769|ref|NP_841839.1| succinyl-CoA synthetase subunit alpha [Nitrosomonas europaea ATCC 19718] gi|30180806|emb|CAD85722.1| ATP-citrate lyase/succinyl-CoA ligases:DUF184 [Nitrosomonas europaea ATCC 19718] Length = 295 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 135/304 (44%), Positives = 193/304 (63%), Gaps = 13/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+++ T+++VQG TG+ GTFH ++ I Y + VVGG+ P KG G +PVF Sbjct: 1 MAILINEQTRIIVQGFTGRIGTFHAQEMIDY-GSNVVGGVTPGKGGQKHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 TV EA E+ A AS+++VPP+ A D+I+E+ +A I V IT+GIP DM+ VK L Sbjct: 56 TVREAVEQAGAEASIVFVPPAFAADSIMEAADAGIKYCVSITDGIPTQDMMTVKNFLRLF 115 Query: 119 --KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + L GPNC G ++P +GIMPG I+ +G VG++ RSGTL YEA Q + +G Sbjct: 116 PEEDRMMLTGPNCSGTISPGRAMLGIMPGHIYSRGVVGVVGRSGTLGYEAADQMRRLNIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ +VL+ D T+ +M+GEIGG E EA F K+ Sbjct: 176 ISTSVGIGGDPIIGSSHRNVLQKLEEDPETKVTLMIGEIGGPMEVEAGLFAKENMS---- 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V ++AG TAPPGR MGHAGA+IS A +K+ +KE G+ I P+P+ +G ++ ++ Sbjct: 232 KPLVAYIAGLTAPPGRRMGHAGAIISSAGESAAEKVERLKELGVTICPTPSLMGETVAKV 291 Query: 297 LGSL 300 L L Sbjct: 292 LAGL 295 >gi|148273731|ref|YP_001223292.1| succinyl-CoA synthetase subunit alpha [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831661|emb|CAN02630.1| succinyl-CoA synthetase alpha chain [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 295 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 142/302 (47%), Positives = 204/302 (67%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+N++++VQGLTG GT H + +L ++VVGG++P+K + T V +P+F Sbjct: 1 MSILLDENSRIIVQGLTGSEGTKHAGR-MLASGSKVVGGVNPRKAGSTVTIEGVELPIFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA T A+ SVI+VPP+ A A++E+I+A IPL V ITEGIPV D + + + Sbjct: 60 SVAEAMAETGADVSVIFVPPAFAKSAVVEAIDAAIPLAVVITEGIPVKDSAEFWSHAKST 119 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R++GPNCPGI++P GI+P +I G +G++S+SGTLTY+ +F+ LG S Sbjct: 120 GGKTRIVGPNCPGIISPGKSNAGIIPATITEAGPIGLVSKSGTLTYQMMFELRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID LE F AD T +IVM+GEIGG AEE AA+++K KP Sbjct: 178 TAIGIGGDPIIGTTHIDALEAFEADPETRAIVMIGEIGGDAEERAAEYIKAHV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SGG G A+ K A++ +G+ + +P L E+ Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGGSGTAQGKKEALEASGVKVGKTPTETANLLREVFA 293 Query: 299 SL 300 +L Sbjct: 294 AL 295 >gi|168699853|ref|ZP_02732130.1| succinyl-CoA synthetase, alpha subunit [Gemmata obscuriglobus UQM 2246] Length = 304 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 171/307 (55%), Positives = 217/307 (70%), Gaps = 13/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGG--NVNVPV 58 MSILVDK+T+V+ QG+TGK G FHT+Q +LY TQ VGG P G T W G +PV Sbjct: 1 MSILVDKSTRVICQGITGKHGAFHTDQCLLY-GTQFVGGTKPGAGGTTWKGDKSGKELPV 59 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F TVA+A + T A AS+I+VPP+GA AIIE+ +A I LIV ITEGIPVLDM + K L+ Sbjct: 60 FNTVADAVKATGATASMIFVPPAGAAAAIIEAADAGIQLIVAITEGIPVLDMAKAKRYLK 119 Query: 119 -KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK-----GSVGILSRSGTLTYEAVFQTSQ 172 K RL+GPNCPG++TP CKIGIMPG I + +G++SRSGTLTYEAVFQ + Sbjct: 120 TKPGVRLVGPNCPGVITPGQCKIGIMPGHIHKPCGPGEKGIGVISRSGTLTYEAVFQLTA 179 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GL QST VGIGGDPV GT I++LE+F DE T +I+M+GEIGG+AEE A A Sbjct: 180 LGLPQSTCVGIGGDPVIGTNQIELLEMFEKDEGTSAILMIGEIGGTAEEAA----AAYAA 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 + KP+ F+AG+TAPPGR MGHAGA++SGG G AEDKI A++ AG +AP+PA +G + Sbjct: 236 KNVTKPLAAFIAGQTAPPGRRMGHAGAIVSGGSGKAEDKIAALEAAGFVVAPTPADLGAA 295 Query: 293 LVELLGS 299 + + + Sbjct: 296 VQQAIAK 302 >gi|220911708|ref|YP_002487017.1| succinyl-CoA synthetase subunit alpha [Arthrobacter chlorophenolicus A6] gi|219858586|gb|ACL38928.1| succinyl-CoA synthetase, alpha subunit [Arthrobacter chlorophenolicus A6] Length = 300 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 141/307 (45%), Positives = 198/307 (64%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K++KV+VQG+TG GT HT +L T +VGG++ +K T G + VF Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHTA-LMLKAGTNIVGGVNARKAGTTVLHGEKEITVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA T A+ S+++VPP+ A++E+IEA I L+V ITEG+PV D A + Sbjct: 60 TVKEAIAETGADVSIVFVPPAFTKAAVVEAIEAGIGLVVVITEGVPVQDSAEFWALAQAT 119 Query: 120 ------SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 VDADGNQVTRIIGPNCPGIITPGEALVGITPANITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDP+ GT ID L F AD T++IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPIIGTTHIDALAAFEADPETKAIVMIGEIGGDAEERAADFIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + L Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAKLL 293 Query: 294 VELLGSL 300 E+ +L Sbjct: 294 REVFAAL 300 >gi|21224886|ref|NP_630665.1| succinyl-CoA synthetase subunit alpha [Streptomyces coelicolor A3(2)] gi|3288607|emb|CAA19779.1| succinyl-coa synthetase alpha chain [Streptomyces coelicolor A3(2)] Length = 308 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 135/297 (45%), Positives = 188/297 (63%), Gaps = 7/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K +KVLVQG+TG G HT + +L T VVGG++P+K N VPVF Sbjct: 1 MAIYLTKESKVLVQGMTGAEGMKHTRR-MLAAGTDVVGGVNPRKAGRTVDFDNRTVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V E ERT A+ +V++VPP+ A A++E+ +A + L V ITEGIPV D V + A Sbjct: 60 SVREGIERTGADVTVVFVPPAFAEAAVVEAADAGVGLAVVITEGIPVHDSVALTAHARAK 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G ST Sbjct: 120 GTRVIGPNCPGLITPGQSNAGIIPPDITKPGRIGLVSKSGTLTYQLMYELRD--IGFSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L F D TE IV++GEIGG AEE AA ++ KP+V Sbjct: 178 VGIGGDPVVGTSHIDCLAAFEDDPDTELIVLIGEIGGDAEERAAAHIRAHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 ++AG TAP GRTMGHAGA++SG G A K A++ G+ + +P R +++ L Sbjct: 234 AYIAGFTAPEGRTMGHAGAIVSGSSGTARAKKEALESVGVRVGSTPTETARHVLQAL 290 >gi|15806267|ref|NP_294972.1| succinyl-CoA synthetase subunit alpha [Deinococcus radiodurans R1] gi|6458991|gb|AAF10818.1|AE001972_8 succinyl-CoA synthetase, alpha subunit [Deinococcus radiodurans R1] Length = 301 Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 146/310 (47%), Positives = 203/310 (65%), Gaps = 20/310 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M ILVDKN+KV+VQG+TG G H+ +A+ TQVV G+ P KG + G P++ Sbjct: 1 MGILVDKNSKVIVQGMTGSEGAKHS-RAMKEFGTQVVAGVTPGKGGQDFEG----WPIYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 +VAEAKE+ AN S+I+VPP+GA DA++E+ A IPLIV ITEG+P +DM+R +++ Sbjct: 56 SVAEAKEKHGANVSIIFVPPAGAADAVLEAAHAGIPLIVLITEGVPTVDMMRAVQEVKEL 115 Query: 120 ---------SSSRLIGPNCPGILTPDSCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQ 169 RLIG NCPG++T K+GIMP I+ G +G++SRSGTLTYEA Sbjct: 116 DAHSKANGGQGVRLIGGNCPGLVTNGEAKVGIMPNRIYTNPGRIGLISRSGTLTYEAAKL 175 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + G+G ST VGIGGDPV GT F DVL +F ADE T+++V++GEIGG+ EE AA+++K+ Sbjct: 176 LNDAGMGTSTTVGIGGDPVIGTTFADVLPMFEADEGTDAVVVIGEIGGADEEAAAEYIKN 235 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KKP+V F++G++AP G+ MGHAGA+I G G E K+ A K A + +A + I Sbjct: 236 NM----KKPVVAFISGRSAPAGKRMGHAGAIIMGDVGTPESKLAAFKAANVPVADTMPEI 291 Query: 290 GRSLVELLGS 299 + + L Sbjct: 292 IDLVKQALNK 301 >gi|56696453|ref|YP_166810.1| succinyl-CoA synthetase subunit alpha [Ruegeria pomeroyi DSS-3] gi|56678190|gb|AAV94856.1| malate--CoA ligase, alpha subunit [Ruegeria pomeroyi DSS-3] Length = 296 Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 139/301 (46%), Positives = 184/301 (61%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +D+ T V+VQG+TGK FHT I Y V G VPVF Sbjct: 1 MSIFIDRETPVIVQGITGKMARFHTADMIAYGTNVVGGV-----VPGKGGQTVEGVPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 TV EA ERT A AS+++VPP A D+I+E+ +A I VCIT+GIP DM+RVK + Sbjct: 56 TVEEAVERTGAEASLVFVPPPFAADSIMEAADAGIRYCVCITDGIPAQDMIRVKRYMYRY 115 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + L GPNC G ++P +GIMPG I+ G VGI+ RSGTL YEA Q + G+G Sbjct: 116 PRERRMVLTGPNCAGTISPGKALLGIMPGHIYLPGPVGIIGRSGTLGYEAAAQLKEHGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+L F D+ T I M+GEIGG E EAA +++D Sbjct: 176 VSTSVGIGGDPINGSSFKDILHRFEQDDETHVICMIGEIGGPQEAEAAAYIRDHVS---- 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ +VAG TAP GRTMGHAGA+IS A +K+ + AG+ +AP+PA IG ++ + Sbjct: 232 KPVIAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILTAAGVTVAPNPAVIGDTIARV 291 Query: 297 L 297 + Sbjct: 292 M 292 >gi|170782915|ref|YP_001711249.1| succinyl-CoA synthetase subunit alpha [Clavibacter michiganensis subsp. sepedonicus] gi|169157485|emb|CAQ02675.1| succinyl CoA synthetase alpha chain [Clavibacter michiganensis subsp. sepedonicus] Length = 295 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 143/302 (47%), Positives = 204/302 (67%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+N+K++VQGLTG GT H + +L ++VVGG++P+K + T V +P+F Sbjct: 1 MSILLDENSKIIVQGLTGSEGTKHAGR-MLASGSKVVGGVNPRKAGSTVTIEGVELPIFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA T A+ SVI+VPP+ A A++E+I+A IPL V ITEGIPV D + + + Sbjct: 60 SVAEAMTETGADVSVIFVPPAFAKSAVVEAIDAAIPLAVVITEGIPVKDSAEFWSHAKST 119 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R++GPNCPGI++P GI+P +I G +G++S+SGTLTY+ +F+ LG S Sbjct: 120 GGKTRIVGPNCPGIISPGKSNAGIIPATITEAGPIGLVSKSGTLTYQMMFELRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID LE F AD T +IVM+GEIGG AEE AA+++K KP Sbjct: 178 TAIGIGGDPIIGTTHIDALEAFEADPETRAIVMIGEIGGDAEERAAEYIKAHV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SGG G A+ K A++ +G+ + +P L E+ Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGGSGTAQGKKEALEASGVKVGKTPTETANLLREVFA 293 Query: 299 SL 300 +L Sbjct: 294 AL 295 >gi|257068099|ref|YP_003154354.1| succinyl-CoA synthetase subunit alpha [Brachybacterium faecium DSM 4810] gi|256558917|gb|ACU84764.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Brachybacterium faecium DSM 4810] Length = 296 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 139/300 (46%), Positives = 196/300 (65%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 MSI +D+N+KV+VQG+TG G H+ Q +L T +VGG++P+K + G VPV+ Sbjct: 1 MSIFLDENSKVIVQGMTGSEGMKHS-QRMLDSGTNIVGGVNPRKAGQTVSFEGGAEVPVY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVAEA T AN SV++VPP A A +E+I+A I L+V ITEGIPV D + Sbjct: 60 GTVAEAMAATGANVSVVFVPPKFAKAAALEAIDAAIELLVIITEGIPVKDSAEFFTYSQA 119 Query: 120 SS-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPG+++P GI P +I G++G++S+SGTLTY+ +++ + +G + Sbjct: 120 KGTTRIIGPNCPGLISPGKSNAGITPSNITGAGTLGLVSKSGTLTYQMMYELAD--IGFT 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDPV GT ID LE F D T IVM+GEIGG AEE AA+++KD KP Sbjct: 178 TAIGIGGDPVIGTTHIDALEAFENDPETAGIVMIGEIGGDAEERAAEYIKDNV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P + E++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPTETADLMREIIK 293 >gi|254581882|ref|XP_002496926.1| ZYRO0D11352p [Zygosaccharomyces rouxii] gi|238939818|emb|CAR27993.1| ZYRO0D11352p [Zygosaccharomyces rouxii] Length = 325 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 144/304 (47%), Positives = 195/304 (64%), Gaps = 10/304 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++++ K +KV++QG TGK TFH + + Y T +VGG +PKK G PVF Sbjct: 26 NLILPKESKVIIQGFTGKQATFHAKISQEY-GTNIVGGTNPKKAGQTHLGQ----PVFAN 80 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A T A A+ I+VPP A AI E+IEAEIPL V ITEGIP DM+ V L+ + Sbjct: 81 VRDAVRETGATATGIFVPPPIAAGAIREAIEAEIPLAVAITEGIPQHDMLYVSEMLKSQD 140 Query: 121 SSRLIGPNCPGILTPDSC-KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI+ P S +IGI P IF+ G +GI+S+SGTLTYEAV QT+ GLGQ+ Sbjct: 141 KTRLVGPNCPGIINPRSNVRIGIQPTRIFKPGKIGIISKSGTLTYEAVQQTTLAGLGQTL 200 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKP 238 +G+GGD GT+FID L+LFL D+ TE I+M+GEIGG AE EAA+FLK+ R P Sbjct: 201 VIGMGGDAFPGTDFIDTLKLFLEDKETEGIIMLGEIGGKAEIEAAEFLKEYNFNRPNPLP 260 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG A G MGH+GA++ G AE K A++ G+ + SP +G++L++ Sbjct: 261 VASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKKALRSVGVNVVESPGHLGKALLDE 320 Query: 297 LGSL 300 L Sbjct: 321 FAKL 324 >gi|84489392|ref|YP_447624.1| succinyl-CoA synthetase subunit alpha [Methanosphaera stadtmanae DSM 3091] gi|84372711|gb|ABC56981.1| SucD [Methanosphaera stadtmanae DSM 3091] Length = 288 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 134/295 (45%), Positives = 190/295 (64%), Gaps = 11/295 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+D+NTK +VQG+TGK G FHT++ + Y T +V G P K G VPV+ ++ Sbjct: 2 ILLDENTKAVVQGITGKQGRFHTKEMVEY-NTNIVAGTSPGKAGQTVDG----VPVYNSI 56 Query: 63 AEAKERTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 E K++ NAS+I++P DA E+I +++ L++ ITE +P+ D + + ++ + Sbjct: 57 EEIKQKHPEVNASIIFIPAPFVKDAAFEAI-SQLDLVIIITEHLPIHDSMEIVEYAKQHN 115 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 + LIGPN PGI+TP K+GIMP IF+KG VG++SRSGTLTYE Q S G G STAV Sbjct: 116 TTLIGPNTPGIITPGVGKLGIMPTHIFKKGKVGLVSRSGTLTYEVASQISAAGYGLSTAV 175 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G+GGDPV G F ++LE F D TE IVM+GEIGG AE +AA++ ++ KPI+ Sbjct: 176 GVGGDPVTGESFTNILEKFENDPETEQIVMLGEIGGIAEVKAAKYAQEN----LTKPIIS 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 F+AG +AP G+ MGHAGA+I G G A++K +K G+ +A P+ I L E+ Sbjct: 232 FIAGVSAPLGKRMGHAGAIIEGTDGTAQNKKELLKSYGVHVADIPSDIVTILNEI 286 >gi|256380493|ref|YP_003104153.1| succinyl-CoA synthetase subunit alpha [Actinosynnema mirum DSM 43827] gi|255924796|gb|ACU40307.1| succinyl-CoA synthetase, alpha subunit [Actinosynnema mirum DSM 43827] Length = 296 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 138/302 (45%), Positives = 200/302 (66%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG GT HT++ +L T +VGG++P+K +PVF Sbjct: 1 MAIFITKDSKVIVQGMTGAEGTKHTKR-MLASGTTIVGGVNPRKAGEKVDFDGTVLPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 +VA+A E T A+ +VI+VPP+ A A+IE+I+A I L V ITEGIPV D A Sbjct: 60 SVADAMEATGADVTVIFVPPAFAKAAVIEAIDAGIGLAVVITEGIPVHDTAVFWAHAVAT 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG+++P GI+P +I G +G++S+SGTLTY+ +++ G S Sbjct: 120 GNKTRIIGPNCPGLISPGQSNAGIIPANISGAGKIGLVSKSGTLTYQMMYELRD--FGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID LE F AD T +IVM+GEIGG AEE AA ++KD KP Sbjct: 178 TAIGIGGDPIIGTTHIDALEAFEADPETAAIVMIGEIGGDAEERAAAYIKDNV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + E++ Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAALMREIMS 293 Query: 299 SL 300 ++ Sbjct: 294 TI 295 >gi|330721100|gb|EGG99234.1| Malate--CoA ligase [ADP-forming] alpha chain [gamma proteobacterium IMCC2047] Length = 295 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 135/303 (44%), Positives = 191/303 (63%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+ ++V+VQG TGK TFH E + Y T VVGG P +G G PVF Sbjct: 1 MAILITDKSRVIVQGFTGKIATFHAEDMMSY-GTNVVGGTTPGRGGETHLGK----PVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 TV +A + A+AS+I+VP A DAI+E+ EA I V IT+GIP DM+RVK ++ Sbjct: 56 TVQDAVQHEGADASIIFVPGPFAADAIMEAAEAGIKFCVAITDGIPAQDMIRVKRYMKAF 115 Query: 119 --KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 +S L GPNC G ++P +GIMP I+ G VG++ RSGTL YEA Q + G+G Sbjct: 116 SKESKMVLTGPNCAGSISPGKAMLGIMPSHIYTPGRVGVIGRSGTLGYEAAVQMADHGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+++GIGGDP+ G+ F D LELF D T++I+M+GEIGGS E +AA++ +D + Sbjct: 176 ISSSIGIGGDPINGSGFKDHLELFDKDPETDAILMIGEIGGSQEVKAAEWARDNCE---- 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ ++AG TAP GRTMGHAGA++S A +K+ ++ G+ +A P+ IG ++ E Sbjct: 232 KPVISYIAGLTAPKGRTMGHAGAIVSSSGESAAEKVELLRACGVSVAVRPSDIGTTVAEA 291 Query: 297 LGS 299 L Sbjct: 292 LKK 294 >gi|227536034|ref|ZP_03966083.1| succinate--CoA ligase [Sphingobacterium spiritivorum ATCC 33300] gi|300772006|ref|ZP_07081876.1| succinate--CoA ligase (ADP-forming) [Sphingobacterium spiritivorum ATCC 33861] gi|227243931|gb|EEI93946.1| succinate--CoA ligase [Sphingobacterium spiritivorum ATCC 33300] gi|300760309|gb|EFK57135.1| succinate--CoA ligase (ADP-forming) [Sphingobacterium spiritivorum ATCC 33861] Length = 290 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 162/299 (54%), Positives = 214/299 (71%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++KV+VQG TG GT+H Q I Y T VVGG+ P KG +++ PVF Sbjct: 1 MSVLVNKDSKVIVQGFTGTEGTYHATQMIEY-GTNVVGGVTPGKGGQ----QHLDRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV +A ++T AN S+I+VPP+ A DAI+E+ A I +IVCITEGIP DM++VK+ L Sbjct: 56 TVQDAVDKTGANVSIIFVPPAFAADAIMEAAAAGIEVIVCITEGIPTKDMIQVKSYLSDK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +SRLIGPNCPGI+T D KIGIMPG IF+KG+VGI+S+SGTLTYEAV QT + GLG +TA Sbjct: 116 NSRLIGPNCPGIITADEAKIGIMPGFIFKKGNVGIVSKSGTLTYEAVDQTVKAGLGITTA 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT + +EL + D T+ I+M+GEIGG E EAA+++K+ KP+V Sbjct: 176 IGIGGDPIIGTTTKEAVELLMNDPETKGIIMIGEIGGGMEAEAARWIKEH----GTKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GF+AG+TAPPGR MGHAGA++ G A K+ M E GI + SPA IG+++ E L Sbjct: 232 GFIAGQTAPPGRRMGHAGAIVGGADDTAAAKMKIMAECGIRVVESPAEIGKAIAEELAK 290 >gi|298486520|ref|ZP_07004580.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158997|gb|EFI00058.1| Succinyl-CoA ligase [ADP-forming] alpha chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 255 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 136/234 (58%), Positives = 169/234 (72%), Gaps = 5/234 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T +N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVDTTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVILIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K + Sbjct: 176 VGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHVDQA 229 >gi|296393908|ref|YP_003658792.1| succinyl-CoA synthetase subunit alpha [Segniliparus rotundus DSM 44985] gi|296181055|gb|ADG97961.1| succinyl-CoA synthetase, alpha subunit [Segniliparus rotundus DSM 44985] Length = 301 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 147/304 (48%), Positives = 202/304 (66%), Gaps = 14/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++K++KV+VQG+TG GT HT +L T VVGG++ KK + G +V Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHTA-LMLKAGTNVVGGVNAKKAGSTVSHKDKGGNDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV--RV 113 +PVF TVAEAKE+T A+ S+++VPP+ AI+E+I+AEIPL+V ITEG+PV D V Sbjct: 60 LPVFGTVAEAKEKTGADVSIVFVPPAFTKSAIVEAIDAEIPLLVVITEGVPVHDTVAAFA 119 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + + S +R+IGPNCPGI+TP +GI P +I G VG++S+SGTLTY+ +F+ Sbjct: 120 HNKAKGSKTRVIGPNCPGIITPGESLVGITPANIAGSGPVGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID ++ F D ATE IVM+GEIGG AEE AA ++K+ Sbjct: 179 -FGFSTAIGIGGDPVIGTTHIDAIKAFQEDPATEIIVMIGEIGGDAEERAAAYIKENV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P+ Sbjct: 236 --TKPVVAYVAGFTAPEGKTMGHAGAIVSGSAGTAAAKKVALEAVGVKVGKTPSGTAALA 293 Query: 294 VELL 297 E+L Sbjct: 294 REIL 297 >gi|19553761|ref|NP_601763.1| succinyl-CoA synthetase subunit alpha [Corynebacterium glutamicum ATCC 13032] gi|62391403|ref|YP_226805.1| succinyl-CoA synthetase subunit alpha [Corynebacterium glutamicum ATCC 13032] gi|145296560|ref|YP_001139381.1| succinyl-CoA synthetase subunit alpha [Corynebacterium glutamicum R] gi|21325337|dbj|BAB99958.1| Succinyl-CoA synthetase alpha subunit [Corynebacterium glutamicum ATCC 13032] gi|41326744|emb|CAF21226.1| SUCCINYL-COA SYNTHETASE ALPHA SUBUNIT [Corynebacterium glutamicum ATCC 13032] gi|140846480|dbj|BAF55479.1| hypothetical protein [Corynebacterium glutamicum R] Length = 294 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 138/301 (45%), Positives = 200/301 (66%), Gaps = 8/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++ ++++++QG+TG G+ H + IL ++VGG +P+K + +PVF Sbjct: 1 MSIFLNSDSRIIIQGITGSEGSEHARR-ILASGAKLVGGTNPRKAGQTILINDTELPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T A+ +VI+VPP+ A AIIE+I+A IPL V ITEGIPV D A +K Sbjct: 60 TVKEAMEETGADVTVIFVPPAFAKAAIIEAIDAHIPLCVIITEGIPVRDASEAWAYAKKV 119 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +R+IGPNCPGI+TP GI P +I G +G++S+SGTLTY+ +++ S +G ST Sbjct: 120 GHTRIIGPNCPGIITPGESLAGITPANIAGSGPIGLISKSGTLTYQMMYELSD--IGIST 177 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDP+ GT ID LE F AD T++IVM+GEIGG AEE AA F+ KP+ Sbjct: 178 AIGIGGDPIIGTTHIDALEAFEADPETKAIVMIGEIGGDAEERAADFISKHV----TKPV 233 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG+VAG TAP G+TMGHAGA+++G +G A K +A++ G+ + +P+ + + E++ + Sbjct: 234 VGYVAGFTAPEGKTMGHAGAIVTGSEGTARAKKHALEAVGVRVGTTPSETAKLMREVVAA 293 Query: 300 L 300 L Sbjct: 294 L 294 >gi|290958039|ref|YP_003489221.1| succinyl-CoA synthetase subunit alpha [Streptomyces scabiei 87.22] gi|260647565|emb|CBG70670.1| succinyl-CoA synthetase alpha chain [Streptomyces scabiei 87.22] Length = 294 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 145/300 (48%), Positives = 200/300 (66%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++K +KV+VQG+TG G HT+ +L T +VGG++P+K T +PVF Sbjct: 1 MAIFLNKESKVIVQGMTGATGMKHTK-LMLADGTNIVGGVNPRKAGTTVDVDGTEIPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TVAEA E+T AN SV++VPP+ A A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 TVAEAIEKTGANVSVLFVPPAFAKSAVVEAIDAEIPLAVVITEGIAVHDSAAFYAYAGSK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA ++K KKP Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAADYIKANV----KKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P + E+LG Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPTETAKLAREILG 293 >gi|135029|sp|P09143|SUCD_THETH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha gi|68575|pir||SYTWSA succinate-CoA ligase (ADP-forming) (EC 6.2.1.5) alpha chain [validated] - Thermus aquaticus gi|48178|emb|CAA38007.1| succinate--CoA ligase (ADP-forming) [Thermus thermophilus] gi|581794|emb|CAA39507.1| succinyl-CoA synthetase [Thermus aquaticus] gi|227823|prf||1712304D succinyl CoA synthetase:SUBUNIT=alpha Length = 288 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 158/296 (53%), Positives = 202/296 (68%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ILV++ T+VLVQG+TG+ G FHT+Q + Y T++V G+ P KG T G VPV+ TV Sbjct: 2 ILVNRETRVLVQGITGREGQFHTKQMLDY-GTKIVAGVTPGKGGTEVLG----VPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA +AS+I+VP A DA +E+ A IPLIV ITEGIP LDMVR ++ S Sbjct: 57 KEAVAHHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIG NCPGI++ + KIGIMPG +F++G VGI+SRSGTLTYEA SQ GLG +T VG Sbjct: 117 RLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEAAAALSQAGLGTTTTVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT F D+L LF D TE++V++GEIGGS EEEAA ++KD KKP+VGF Sbjct: 177 IGGDPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKDHM----KKPVVGF 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + G++AP G+ MGHAGA+I G G E K+ A EAGI +A + I + + LG Sbjct: 233 IGGRSAPKGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADTIDEIVELVKKALG 288 >gi|256831912|ref|YP_003160639.1| succinyl-CoA synthetase, alpha subunit [Jonesia denitrificans DSM 20603] gi|256685443|gb|ACV08336.1| succinyl-CoA synthetase, alpha subunit [Jonesia denitrificans DSM 20603] Length = 297 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 135/301 (44%), Positives = 198/301 (65%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT----GGNVNV 56 M+I ++ +++V+VQG+TG G HT + +L T +VGG++P+K T G+V + Sbjct: 1 MAIFINNDSRVIVQGMTGAEGHKHTTR-MLASGTTIVGGVNPRKAGTSVEFPSPHGSVEI 59 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF TV EA + T A+ SVI+VPP+ A+ E+I+A +PL V ITEG+PV D R Sbjct: 60 PVFGTVREAMDATGADVSVIFVPPAFTKAAVNEAIDAGMPLTVIITEGVPVADTAEFHTR 119 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + RL+GPNCPGI++P +GI+P +I +G +G++S+SGTLTY+ +++ G Sbjct: 120 AQHAGVRLVGPNCPGIISPGQSNVGIIPANITGRGPIGLVSKSGTLTYQMMYELRD--FG 177 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 STA+GIGGDP+ GT ID L F AD TE+IVM+GEIGG AEE AA ++ + Sbjct: 178 FSTAIGIGGDPIIGTTHIDALAAFEADPDTEAIVMIGEIGGDAEERAAAYISEHV----T 233 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ + ++ Sbjct: 234 KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTASAKKEALEAAGVRVGKTPSETAALMRDI 293 Query: 297 L 297 L Sbjct: 294 L 294 >gi|297563043|ref|YP_003682017.1| succinyl-CoA synthetase, subunit alpha [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847491|gb|ADH69511.1| succinyl-CoA synthetase, alpha subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 312 Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 136/300 (45%), Positives = 193/300 (64%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I V+ +++VLVQG+TG GT HT + +L T +VGG++P+K VPVF Sbjct: 1 MAIFVNSDSRVLVQGMTGSEGTKHTRR-MLASGTTIVGGVNPRKAGQKVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAE T A+ +VI+VPP + +A+ E+I+A I L V ITEGIPV D A + Sbjct: 60 SVAEGMAATGADVTVIFVPPKFSREAVFEAIDAGIGLAVVITEGIPVHDTAAFWAHAQAK 119 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPG++TP GI+P I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPSDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA+F++D KP Sbjct: 178 SAVGIGGDPIIGTTHIDALAAFEADPDTDVIVMIGEIGGDAEERAAEFIRDNV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P+ R + +L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVKVGTTPSEAARMVRAVLA 293 >gi|46198477|ref|YP_004144.1| succinyl-CoA synthetase alpha chain [Thermus thermophilus HB27] gi|46196099|gb|AAS80517.1| succinyl-CoA synthetase alpha chain [Thermus thermophilus HB27] Length = 288 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 157/296 (53%), Positives = 202/296 (68%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ILV++ T+VLVQG+TG+ G FHT+Q + Y T++V G+ P KG T G +PV+ TV Sbjct: 2 ILVNRETRVLVQGITGREGQFHTKQMLSY-GTKIVAGVTPGKGGTEVLG----IPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA +AS+I+VP A DA +E+ A IPLIV ITEGIP LDMVR ++ S Sbjct: 57 KEAVAHHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIG NCPGI++ + KIGIMPG +F++G VGI+SRSGTLTYEA SQ GLG +T VG Sbjct: 117 RLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEAAAALSQAGLGTTTTVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT F D+L LF D TE++V++GEIGGS EEEAA ++KD KKP+VGF Sbjct: 177 IGGDPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKDHM----KKPVVGF 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + G++AP G+ MGHAGA+I G G E K+ A EAGI +A + I + + LG Sbjct: 233 IGGRSAPKGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADTIDEIVELVKKALG 288 >gi|255326667|ref|ZP_05367743.1| succinate-CoA ligase, alpha subunit [Rothia mucilaginosa ATCC 25296] gi|255295884|gb|EET75225.1| succinate-CoA ligase, alpha subunit [Rothia mucilaginosa ATCC 25296] Length = 305 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 142/311 (45%), Positives = 211/311 (67%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI V+K++KV+VQG+TG GT HT + +L T +VGG++ +K T T G ++ Sbjct: 1 MSIFVNKDSKVIVQGITGGEGTKHTAR-MLAAGTNIVGGVNARKAGTTVTHKAKDGSDIE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 + V+ +VAEA E+T AN S+++VPP+ A++E+IEA+I L+V ITEG+PV D A Sbjct: 60 LNVYGSVAEAMEKTGANVSIVFVPPAFTKAAVLEAIEAKIGLVVVITEGVPVQDSAEFWA 119 Query: 116 RLE-------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + K +R+IGPNCPGI++P+ C +GI+P +I KG +G++S+SGTLTY+ ++ Sbjct: 120 AAKASVDENGKQITRIIGPNCPGIISPEECLVGIIPANITGKGKIGLVSKSGTLTYQLMY 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G +TA+GIGGDP+ GT ID LE F AD TE+IVM+GEIGG AEE AA+++K Sbjct: 180 ELSD--IGFTTAIGIGGDPIIGTTHIDALEAFEADPETEAIVMIGEIGGDAEERAAEYIK 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 KP+VG++AG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 238 ANV----TKPVVGYIAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSE 293 Query: 289 IGRSLVELLGS 299 + E+ + Sbjct: 294 AANLMREIFAA 304 >gi|311744693|ref|ZP_07718490.1| succinyl-CoA synthetase subunit alpha [Aeromicrobium marinum DSM 15272] gi|311312002|gb|EFQ81922.1| succinyl-CoA synthetase subunit alpha [Aeromicrobium marinum DSM 15272] Length = 298 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 141/305 (46%), Positives = 202/305 (66%), Gaps = 12/305 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++ +KV+VQG+TG G+ HT + +L TQVVGG++ +K T G V Sbjct: 1 MSIFLNAQSKVIVQGITGGEGSKHTAR-MLAAGTQVVGGVNARKAGTTVEHTDADGATVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA + T A+ SV++VPP+ DA++E+I+AEI L+V ITEG+PV D A Sbjct: 60 LPVFGSVAEAMKETGADVSVVFVPPAFTQDAVVEAIDAEIGLLVIITEGVPVQDSAEFWA 119 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 + +R+IGPNCPGI+TP GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YAQGKKTRIIGPNCPGIITPGEALAGITPATISGSGPIGLVSKSGTLTYQMMFELRD--F 177 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G +TA+GIGGDP+ GT ID LE F AD T++IVM+GEIGG AEE+AA +++ Sbjct: 178 GFTTAIGIGGDPIIGTTHIDALEAFEADPDTKAIVMIGEIGGDAEEKAAAYIQAHV---- 233 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+VG+VAG TAP G+TMGHAGA+++ G G A+ K A++ AG+ + +P+ + E Sbjct: 234 TKPVVGYVAGFTAPEGKTMGHAGAIVADGAGTAQGKKEALEAAGVKVGKTPSETAELMRE 293 Query: 296 LLGSL 300 +L L Sbjct: 294 ILQGL 298 >gi|288921663|ref|ZP_06415932.1| succinyl-CoA synthetase, alpha subunit [Frankia sp. EUN1f] gi|288346932|gb|EFC81240.1| succinyl-CoA synthetase, alpha subunit [Frankia sp. EUN1f] Length = 290 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 137/301 (45%), Positives = 196/301 (65%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +D+N++++VQG+TG G+ HT + +L +VV G++ +K G VPVF Sbjct: 1 MAIWLDENSRIVVQGITGGEGSKHTRR-MLASGAKVVAGVNARKVGQQVEG----VPVFG 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VA+A T AN SVI+VPP DA IE+++A IPL V ITEG+PV D A + Sbjct: 56 SVADAMAETGANVSVIFVPPKFTKDAAIEAVDAAIPLAVVITEGVPVHDTTEFFAYSKSK 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + R+IGPNCPGI +P GI+P I G +G++S+SGTLTY+ +++ + G ST Sbjct: 116 GTTRIIGPNCPGIASPGVSNAGIIPADITPGGRIGLVSKSGTLTYQMMYELRE--FGFST 173 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPV GT ID L+ F AD T++IVM+GEIGG AEE AA ++ KP+ Sbjct: 174 CVGIGGDPVIGTTHIDALDAFQADPGTDAIVMIGEIGGDAEERAAAHIEAHV----TKPV 229 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG+VAG TAP G+TMGHAGA++SG G A+ K A+++AG+ + +P+ R + +++ S Sbjct: 230 VGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEKAGVRVGKTPSETARLMADIMRS 289 Query: 300 L 300 L Sbjct: 290 L 290 >gi|283457347|ref|YP_003361923.1| succinyl-CoA synthetase subunit alpha [Rothia mucilaginosa DY-18] gi|283133338|dbj|BAI64103.1| succinyl-CoA synthetase, alpha subunit [Rothia mucilaginosa DY-18] Length = 305 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 143/311 (45%), Positives = 211/311 (67%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI V+K++KV+VQG+TG GT HT + +L T +VGG++ +K T T G ++ Sbjct: 1 MSIFVNKDSKVIVQGITGGEGTKHTAR-MLAAGTNIVGGVNARKAGTTVTHKAKDGSDIE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 + VF +VAEA E+T AN S+++VPP+ A++E+IEA+I L+V ITEG+PV D A Sbjct: 60 LNVFGSVAEAMEKTGANVSIVFVPPAFTKAAVLEAIEAKIGLVVVITEGVPVQDSAEFWA 119 Query: 116 RLE-------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + K +R+IGPNCPGI++P+ C +GI+P +I KG +G++S+SGTLTY+ ++ Sbjct: 120 AAKASVDENGKQITRIIGPNCPGIISPEECLVGIIPANITGKGKIGLVSKSGTLTYQLMY 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G +TA+GIGGDP+ GT ID LE F AD TE+IVM+GEIGG AEE AA+++K Sbjct: 180 ELSD--IGFTTAIGIGGDPIIGTTHIDALEAFEADPETEAIVMIGEIGGDAEERAAEYIK 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 KP+VG++AG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 238 ANV----TKPVVGYIAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSE 293 Query: 289 IGRSLVELLGS 299 + E+ + Sbjct: 294 AANLMREIFAA 304 >gi|332704472|ref|ZP_08424560.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio africanus str. Walvis Bay] gi|332554621|gb|EGJ51665.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio africanus str. Walvis Bay] Length = 721 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 129/295 (43%), Positives = 180/295 (61%), Gaps = 8/295 (2%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 D T++LVQG+TGK HT + Y +++V G+ P KG G PV+ V E Sbjct: 416 FDAQTRILVQGITGKVAALHTRLMLGY-GSRIVAGVTPFKGGLEIEGA----PVYDCVRE 470 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 A +AS+++VP + A DA++E+ EA IP +VCITEGIP DM+ +L + +RL Sbjct: 471 ALRHHEIDASIVFVPAAMAADAVLEAAEAGIPWVVCITEGIPQQDMLATLPKLRRLGTRL 530 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPN PGI+ P KIGIMP F G V I SRSGTLTYEA + S G+GQ+ AVGIG Sbjct: 531 IGPNTPGIIVPGRTKIGIMPTDPFTPGPVAIFSRSGTLTYEAAARLSAAGMGQALAVGIG 590 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 GDP+ G F D L + D ++++++GEIGG AEE+ A ++ + KP+ F+A Sbjct: 591 GDPLIGLGFADCLAMVNDDARVKAVLVLGEIGGRAEEDLADYVS---RTAFSKPMAAFIA 647 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G+TAP GR +GHAGA++ GG K+ A+ AGI + P+ I R ++ LL + Sbjct: 648 GRTAPLGRRLGHAGAILEESSGGVAGKMQALSMAGIHLCPNLESIPRVMMGLLAA 702 >gi|320009000|gb|ADW03850.1| succinyl-CoA synthetase, alpha subunit [Streptomyces flavogriseus ATCC 33331] Length = 294 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 142/300 (47%), Positives = 198/300 (66%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT+ +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGATGMKHTK-LMLADGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 +VAEA E+T A+ SV++VPP+ A A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 SVAEAMEKTGADVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAYAGSK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA ++ KP Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAADYIAKNV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P + E+LG Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPTETAKLAREILG 293 >gi|227494731|ref|ZP_03925047.1| succinate--CoA ligase (ADP-forming) [Actinomyces coleocanis DSM 15436] gi|226831731|gb|EEH64114.1| succinate--CoA ligase (ADP-forming) [Actinomyces coleocanis DSM 15436] Length = 308 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 143/314 (45%), Positives = 199/314 (63%), Gaps = 21/314 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGST------------- 47 M+I +++++KV+VQG+TG GT HT + I TQ+VGG++P+K Sbjct: 1 MTIFLNRDSKVIVQGMTGGEGTKHTTRMIA-AGTQIVGGVNPRKAGQVQSFDITPYGPQA 59 Query: 48 -YWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G VPVF TVAEAKE T AN SVI+VPP DA++E++ A++ L+V ITEG+P Sbjct: 60 DEVRPGIHEVPVFGTVAEAKEATGANVSVIFVPPRFTKDAVLEAVAAKLDLVVVITEGVP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D V + ++ RLIGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VQDSVEFRQAAAEAGVRLIGPNCPGIISPGQSNVGITPADITGPGRIGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ S LG +T +GIGGDPV GT ID LE F AD T+ IVM+GEIGG AEE AA+F Sbjct: 180 MYELSD--LGFTTCIGIGGDPVIGTTHIDALEAFEADPDTDVIVMIGEIGGDAEERAAEF 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 + KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IAKHV----TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQAALEAVGVKVGKTP 293 Query: 287 ARIGRSLVELLGSL 300 + E++ +L Sbjct: 294 TETANLVREVIATL 307 >gi|223949411|gb|ACN28789.1| unknown [Zea mays] Length = 263 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 160/264 (60%), Positives = 201/264 (76%), Gaps = 8/264 (3%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 +VGG+ PKKG T G +PVF +VAEAK T ANA+VIYVPP A AI+E++EAE+ Sbjct: 1 MVGGVTPKKGGTEHLG----LPVFNSVAEAKAETKANATVIYVPPPFAAAAIMEAMEAEL 56 Query: 96 PLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 L VCITEGIP DMV+VKA L +S +RLIGPNCPGI+ P CKIGIMPG I + G +G Sbjct: 57 DLAVCITEGIPQHDMVKVKAALNSQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIG 116 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 I+SRSGTLTYEAVFQT+ GLGQST VGIGGDP GT F+D LE F+ D TE IV++GE Sbjct: 117 IVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFVNDPQTEGIVLIGE 176 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 IGG+AEE+AA F+++ + KP+V F+AG TAPPGR MGHAGA+++GGKG A+DKI A Sbjct: 177 IGGTAEEDAATFIQESKTQ---KPVVAFIAGLTAPPGRRMGHAGAIVAGGKGTAQDKIKA 233 Query: 275 MKEAGICIAPSPARIGRSLVELLG 298 ++EAG+ + SPA+IG ++ E+ Sbjct: 234 LREAGVTVVESPAKIGSTMFEIFK 257 >gi|325283197|ref|YP_004255738.1| succinyl-CoA synthetase, alpha subunit [Deinococcus proteolyticus MRP] gi|324315006|gb|ADY26121.1| succinyl-CoA synthetase, alpha subunit [Deinococcus proteolyticus MRP] Length = 301 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 144/310 (46%), Positives = 201/310 (64%), Gaps = 20/310 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M ILV+K++KV+VQG+TG G H+ +A+ TQVV G+ P KG + G P++ Sbjct: 1 MGILVNKDSKVIVQGMTGSEGAKHS-RAMKEFGTQVVAGVTPGKGGQDFEG----WPIYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 +VAEAKE+ AN S+I+VPP+GA DA++E+ A IPLIV ITEG+P +DM+R ++ Sbjct: 56 SVAEAKEKHGANVSIIFVPPAGAADAVLEAAHAGIPLIVLITEGVPTVDMMRAVQEVKAL 115 Query: 119 --------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQ 169 RLIG NCPG++T K+GIMP I+ G +G++SRSGTLTYEA Sbjct: 116 DAESRKNGGEGIRLIGGNCPGLVTNGEAKVGIMPNRIYTNPGRIGLISRSGTLTYEAAKL 175 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + G+G ST VGIGGDPV GT F DVL +F ADE T+++V++GEIGG+ EE AA+++K+ Sbjct: 176 LNDAGMGTSTTVGIGGDPVIGTTFADVLPMFEADEGTDAVVVIGEIGGADEEAAAEYIKN 235 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KKP+V F++G++AP G+ MGHAGA+I G G E K+ A K A + +A + I Sbjct: 236 NM----KKPVVAFISGRSAPAGKRMGHAGAIIMGDVGTPESKLAAFKAANVPVADTMPEI 291 Query: 290 GRSLVELLGS 299 + L Sbjct: 292 VDLVKAALNK 301 >gi|320449884|ref|YP_004201980.1| succinate-CoA ligase, alpha subunit subfamily [Thermus scotoductus SA-01] gi|320150053|gb|ADW21431.1| succinate-CoA ligase, alpha subunit subfamily [Thermus scotoductus SA-01] Length = 288 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 154/296 (52%), Positives = 202/296 (68%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 IL+++ T+VLVQG+TG+ G FHT Q + Y T+VV G+ P KG + G +PV+ TV Sbjct: 2 ILINRETRVLVQGITGREGQFHTRQMLEY-GTKVVAGVTPGKGGSEVLG----LPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA A +AS+I+VP A DA +E+ A IPLIV ITEGIP LDMV+ ++ S Sbjct: 57 KEAVAHHAIDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVKAVEEIKALGS 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIG NCPGI++ + KIGIMPG +F++G VG++SRSGTLTYEA SQ GLG +T VG Sbjct: 117 RLIGGNCPGIISAEESKIGIMPGHVFKRGKVGLISRSGTLTYEAAAALSQAGLGTTTTVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT F D+L LF D TE++V++GEIGGS EEEAA ++K+ KKP+VGF Sbjct: 177 IGGDPVIGTTFKDLLPLFNQDPETEAVVLIGEIGGSDEEEAAAWIKENM----KKPVVGF 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + G++AP G+ MGHAGA+I G G E K+ A EAGI +A + I + + LG Sbjct: 233 IGGRSAPKGKRMGHAGAIIMGNVGTPESKLKAFAEAGIPVADTIDEIVELVKKALG 288 >gi|302308680|ref|NP_985681.2| AFR134Cp [Ashbya gossypii ATCC 10895] gi|299790743|gb|AAS53505.2| AFR134Cp [Ashbya gossypii ATCC 10895] Length = 319 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 150/301 (49%), Positives = 194/301 (64%), Gaps = 10/301 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ K TKV+ QG TGK TFH + + Y TQVVGG +PKK G PVF + Sbjct: 23 NLLMPKGTKVIFQGFTGKQATFHAKISQEY-GTQVVGGTNPKKAGQVHLGQ----PVFAS 77 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA T A A+ I+VPP A AI E+IEAE+PL VC+TEGIP DM+ + L + Sbjct: 78 VAEAVRETGATATGIFVPPPIAAPAIREAIEAEVPLAVCVTEGIPQHDMLYIAEMLRTQD 137 Query: 121 SSRLIGPNCPGILTPDSC-KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+GPNCPGI+ P S +IGI P IF G +GI+S+SGTLTYEAV QTS GLGQS Sbjct: 138 KTRLVGPNCPGIINPGSNVRIGIQPTKIFTPGKIGIVSKSGTLTYEAVQQTSLVGLGQSL 197 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK-RGRKKP 238 +GIGGD GT+FID L LF+ D TE I+++GEIGG AE EAA+FLK + R P Sbjct: 198 VIGIGGDAFPGTDFIDALRLFMEDGVTEGIILLGEIGGKAEIEAAEFLKAYNQTRATPMP 257 Query: 239 IVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG A G MGH+GA++ G AE K A++ AG+ + SP R+G +L++ Sbjct: 258 VASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKAALRAAGVAVVESPGRLGEALLKQ 317 Query: 297 L 297 Sbjct: 318 F 318 >gi|326383704|ref|ZP_08205389.1| succinyl-CoA synthetase subunit alpha [Gordonia neofelifaecis NRRL B-59395] gi|326197468|gb|EGD54657.1| succinyl-CoA synthetase subunit alpha [Gordonia neofelifaecis NRRL B-59395] Length = 300 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 150/307 (48%), Positives = 201/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++KN KV+VQG+TG GT HT +L T VVGG++ +K T G V Sbjct: 1 MSIYLNKNNKVIVQGITGGEGTKHTA-LMLKAGTNVVGGVNARKAGTTVSHVDADGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E T A+ S+ +VPP+ + DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFASVAEAMESTGADTSIAFVPPAFSKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + + +R+IGPNCPGI+TP +GI P +I KG +G++S+SGTLTY+ +++ Sbjct: 120 YNVEKGAKTRIIGPNCPGIITPGEALVGITPNNITGKGPIGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKLIVMIGEIGGDAEERAADYIKANVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALA 293 Query: 294 VELLGSL 300 EL +L Sbjct: 294 RELFDAL 300 >gi|261337761|ref|ZP_05965645.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium gallicum DSM 20093] gi|270277214|gb|EFA23068.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium gallicum DSM 20093] Length = 306 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 136/312 (43%), Positives = 196/312 (62%), Gaps = 19/312 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTY------WTGGNV 54 MS ++ N V+VQG+TG G HT + +L T +VGG++P+K T G +V Sbjct: 1 MSAFIEDNAPVIVQGMTGHQGMTHTLR-MLKAGTNIVGGVNPRKAGTTVLFEGAHDGEDV 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 ++PV+ T AEAKE T A ASV++VPP A DA++E+IEA I LIV ITEGIPV D Sbjct: 60 HIPVYATCAEAKEATGAKASVVFVPPRFAKDAVVEAIEAGIELIVVITEGIPVNDSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGILTPDSC------KIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 R++GPNCPG++T +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALSRGVRIVGPNCPGLMTLGESEHARGVNLGIIPDGIVSRGPLGLVSKSGTLTYQMMA 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G GGDP+ GT + L+ F D+ T++++M+GEIGG AE+EAAQ+ Sbjct: 180 ELSD--IGFTACLGAGGDPIVGTMLREALQEFEQDDDTKAVIMIGEIGGKAEQEAAQWAH 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 D KP+V ++AG TAP G+ MGHAGA+ISGGKG A+DK A++ GI + +P+ Sbjct: 238 DHM----TKPVVAYIAGFTAPEGKQMGHAGAIISGGKGTAQDKKEALEAVGIPVGKTPSE 293 Query: 289 IGRSLVELLGSL 300 R + E+L L Sbjct: 294 AARLMREVLAQL 305 >gi|218296427|ref|ZP_03497170.1| succinyl-CoA synthetase, alpha subunit [Thermus aquaticus Y51MC23] gi|218243221|gb|EED09752.1| succinyl-CoA synthetase, alpha subunit [Thermus aquaticus Y51MC23] Length = 288 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 155/296 (52%), Positives = 202/296 (68%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ILV++ T+VLVQG+TG+ G FHT+Q + Y T++V G+ P KG T G VPV+ TV Sbjct: 2 ILVNRETRVLVQGITGREGQFHTQQMLAY-GTKIVAGVTPGKGGTEVLG----VPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA + A +AS+I+VP GA DA +E+ A IPLIV ITEGIP LDMV+ + Sbjct: 57 KEAVKNHAIDASIIFVPAPGAADAALEAAHAGIPLIVLITEGIPTLDMVKAVEEIRTLGV 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIG NCPGI++ + K+GIMPG +F++G VG++SRSGTLTYEA SQ GLG +T VG Sbjct: 117 RLIGGNCPGIISAEETKLGIMPGHVFKRGRVGLISRSGTLTYEAAAALSQAGLGTTTTVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT F D+L LF D TE++V++GEIGGS EEEAA ++K KKP+VGF Sbjct: 177 IGGDPVIGTTFKDLLPLFNDDPETEAVVLIGEIGGSDEEEAAAWVKAHM----KKPVVGF 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + G++AP G+ MGHAGA+I G G E K+ A EAGI +A + I + + LG Sbjct: 233 IGGRSAPKGKRMGHAGAIIMGNVGTPESKLKAFAEAGIPVADTIDEIVELVKKALG 288 >gi|323697830|ref|ZP_08109742.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio sp. ND132] gi|323457762|gb|EGB13627.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio desulfuricans ND132] Length = 692 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 125/294 (42%), Positives = 180/294 (61%), Gaps = 9/294 (3%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 +D +T +LVQG+TG+ G HT Y VV G+ P KG G VPV+ ++A+ Sbjct: 408 IDADTPILVQGITGREGQLHTRLMQEY-GANVVAGVTPFKGGQEVLG----VPVYDSIAQ 462 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 A AS+I+VPP A DA+ E++ EIP VCITEGI DM+ + + S +R+ Sbjct: 463 AARAHDIGASIIFVPPRMAADAVAEAVRNEIPWTVCITEGITQHDMLAAFEQAKGSPTRI 522 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPN PG++ P KIGIMP F G V +LSRSGTLTYE + ++ G+GQS VGIG Sbjct: 523 VGPNTPGVIVPGRTKIGIMPTMPFMPGPVAVLSRSGTLTYEVADRLTRAGIGQSLCVGIG 582 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 GDP G +F+D+ E+ + T ++V++GEIGG AEE A+++ + G KP++ F+A Sbjct: 583 GDPFIGVDFVDMFEMIRNHDETRAVVVLGEIGGQAEENLAEYV---VRTGFDKPVISFIA 639 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G+TAP G+ +GHAGA+++ G GG +DK+ M AG + PS + + L Sbjct: 640 GQTAPAGKRLGHAGAILANG-GGIKDKLETMGRAGFAVCPSLEAVAETTARALK 692 >gi|307332149|ref|ZP_07611235.1| succinyl-CoA synthetase, alpha subunit [Streptomyces violaceusniger Tu 4113] gi|306882214|gb|EFN13314.1| succinyl-CoA synthetase, alpha subunit [Streptomyces violaceusniger Tu 4113] Length = 298 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 141/298 (47%), Positives = 193/298 (64%), Gaps = 7/298 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT + +L T VVGG++P+K T VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGAEGMKHTRR-MLAAGTDVVGGVNPRKAGTRVDIDGAAVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA + T A+ SV++VPP A A+ E+ +A IPL V ITEGIPV D V +A Sbjct: 60 SVREAMDATGADVSVLFVPPPHAKAAVTEAADARIPLAVVITEGIPVHDAVAFQAYARAR 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++R+IGPNCPG+++P GI+P I + G +G++S+SGTLTY+ +++ +G ST Sbjct: 120 ATRIIGPNCPGLISPGQSNAGIIPADITKPGRIGLVSKSGTLTYQLMYELRD--IGFSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA++L D KP+V Sbjct: 178 VGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAARYLADHV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G++AG TAP GRTMGHAGA++SG G A K A++ AG+ + +P +V LL Sbjct: 234 GYIAGFTAPEGRTMGHAGAIVSGSSGTAAAKKAALEAAGVRVGATPTETAGLVVALLA 291 >gi|154148281|ref|YP_001406694.1| succinate-CoA ligase subunit alpha [Campylobacter hominis ATCC BAA-381] gi|153804290|gb|ABS51297.1| succinate-CoA ligase, alpha subunit subfamily [Campylobacter hominis ATCC BAA-381] Length = 291 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 138/300 (46%), Positives = 184/300 (61%), Gaps = 11/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV KNT+V+V G TGK TFH+ + Y V G ++ PVF Sbjct: 1 MSILVHKNTRVIVHGFTGKEATFHSGLCMAYGTNIVGGV-----VPGKGGKEHLGKPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 T EA T A+ S+I+VP +++IE+ +A I L V ITE PV DM+ K K Sbjct: 56 TAKEAVASTRADTSLIFVPAKFVAESVIEAADAGIKLAVVITEHAPVKDMIEAKNYANKC 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS--VGILSRSGTLTYEAVFQTSQEGLGQS 178 +LIGPNCPGI++ D CK+GIMP SIF++ S +G++S+SGTLTYE Q EG G S Sbjct: 116 GMKLIGPNCPGIISSDECKLGIMPNSIFKRKSVNIGLISKSGTLTYEGANQILNEGYGIS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGD + G + ++L L AD T++IV++GEIGGS E +A + +K+ KP Sbjct: 176 TAVGIGGDSIIGLTYSEILPLLEADPDTKAIVIIGEIGGSLEIDACKVIKE----KITKP 231 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 IV F+AG +AP G+ MGHAGA+ISG A K A+ E G+ + +PA IG L E+LG Sbjct: 232 IVAFIAGVSAPKGKRMGHAGAIISGESSTAAGKKKALSEVGVHVVDTPAHIGTKLKEILG 291 >gi|55980506|ref|YP_143803.1| succinyl-CoA synthetase subunit alpha [Thermus thermophilus HB8] gi|55771919|dbj|BAD70360.1| succinyl-CoA synthetase alpha chain [Thermus thermophilus HB8] Length = 288 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 157/296 (53%), Positives = 201/296 (67%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ILV++ T+VLVQG+TG+ G FHT+Q + Y T++V G+ P KG G VPV+ TV Sbjct: 2 ILVNRETRVLVQGITGREGQFHTKQMLSY-GTKIVAGVTPGKGGMEVLG----VPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA +AS+I+VP A DA +E+ A IPLIV ITEGIP LDMVR ++ S Sbjct: 57 KEAVAHHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIG NCPGI++ + KIGIMPG +F++G VGI+SRSGTLTYEA SQ GLG +T VG Sbjct: 117 RLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEAAAALSQAGLGTTTTVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT F D+L LF D TE++V++GEIGGS EEEAA ++KD KKP+VGF Sbjct: 177 IGGDPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKDHM----KKPVVGF 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + G++AP G+ MGHAGA+I G G E K+ A EAGI +A + I + + LG Sbjct: 233 IGGRSAPKGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADTIDEIVELVKKALG 288 >gi|110681360|ref|YP_684367.1| succinyl-CoA synthetase subunit alpha [Roseobacter denitrificans OCh 114] gi|109457476|gb|ABG33681.1| malate-CoA ligase, alpha subunit, putative [Roseobacter denitrificans OCh 114] Length = 297 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 139/303 (45%), Positives = 183/303 (60%), Gaps = 13/303 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +D NT V+VQG+TGK FHT I Y V G VPVF Sbjct: 1 MSIFIDANTPVIVQGITGKMARFHTADMIAYGTNVVGGV-----VPGKGGQTVEGVPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--- 117 TV +A T A AS+++VPP A D+I+E+ +A I VCIT+GIP DM+RVK + Sbjct: 56 TVEDAVTATGAEASLVFVPPPFAADSIMEAADAGIQYCVCITDGIPAQDMIRVKRYMYRY 115 Query: 118 -EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + L GPNC G ++P +GIMPG I+ G VGI+ RSGTL YEA Q + G+G Sbjct: 116 PKDRRMVLTGPNCAGTISPGKALLGIMPGHIYLPGHVGIIGRSGTLGYEAAAQLKEHGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F D+LE F AD+ T I M+GEIGG E EAA +++D Sbjct: 176 VSTSVGIGGDPINGSSFRDILERFEADDETHVICMIGEIGGPQEAEAAAYIRDHV----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ +VAG TAP GRTMGHAGA+IS A +K+ + AG+ +A +PA IG ++ + Sbjct: 232 KPVIAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILSAAGVTVAENPAVIGDTIAGV 291 Query: 297 LGS 299 L Sbjct: 292 LRK 294 >gi|198433232|ref|XP_002123142.1| PREDICTED: similar to ATP-specific succinyl-CoA synthetase alpha subunit [Ciona intestinalis] Length = 333 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 165/295 (55%), Positives = 211/295 (71%), Gaps = 6/295 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I VD +TKV+ QG TGK GT+++ QAI Y T VVGG+ PKK T G +PVF Sbjct: 29 NIKVDSDTKVIYQGFTGKHGTYNSRQAIEY-GTNVVGGVSPKKAGTSHLG----LPVFKD 83 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS- 120 VAEA+E T A ASVI+VPP A DAI+E+I+AEIPL+VCITEGIP DMV+VK RLE+ Sbjct: 84 VAEAREATGAEASVIFVPPRFAADAIMEAIDAEIPLVVCITEGIPQQDMVKVKTRLEQQD 143 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPN PGI+ P CK+G+MPG I R G + I+SRSGTL YEAV G GQ+ Sbjct: 144 KTRLVGPNSPGIIVPGKCKLGVMPGHIHRGGEIAIVSRSGTLMYEAVDGIINAGFGQTIC 203 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP GT F+D L++FL D+ TE I ++GEIG AEEEAA++LK KP+ Sbjct: 204 VGIGGDPFNGTNFVDCLDVFLKDDKTEGIFLIGEIGVEAEEEAAEYLKMNNVGKGAKPVA 263 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 ++AG TAPP R MGHAGA+I+GGKGGAE KI A+++AG+ + +PAR+G ++ Sbjct: 264 AYIAGVTAPPDRRMGHAGAIIAGGKGGAEGKIKALRDAGVNVTLNPARMGWVMLR 318 >gi|33357757|pdb|1OI7|A Chain A, The Crystal Structure Of Succinyl-Coa Synthetase Alpha Subunit From Thermus Thermophilus Length = 288 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 157/296 (53%), Positives = 201/296 (67%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ILV++ T+VLVQG+TG+ G FHT+Q + Y T++V G+ P KG G VPV+ TV Sbjct: 2 ILVNRETRVLVQGITGREGQFHTKQMLTY-GTKIVAGVTPGKGGMEVLG----VPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA +AS+I+VP A DA +E+ A IPLIV ITEGIP LDMVR ++ S Sbjct: 57 KEAVAHHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIG NCPGI++ + KIGIMPG +F++G VGI+SRSGTLTYEA SQ GLG +T VG Sbjct: 117 RLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEAAAALSQAGLGTTTTVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT F D+L LF D TE++V++GEIGGS EEEAA ++KD KKP+VGF Sbjct: 177 IGGDPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKDHM----KKPVVGF 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + G++AP G+ MGHAGA+I G G E K+ A EAGI +A + I + + LG Sbjct: 233 IGGRSAPKGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADTIDEIVELVKKALG 288 >gi|167628506|ref|YP_001679005.1| succinyl-coa synthetase alpha chain 2 [Heliobacterium modesticaldum Ice1] gi|167591246|gb|ABZ82994.1| succinyl-coa synthetase alpha chain 2 [Heliobacterium modesticaldum Ice1] Length = 289 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 134/299 (44%), Positives = 192/299 (64%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILV+ + VL+QG+TGK G+FH +Q + T VV G+ P KG + G VP++ Sbjct: 1 MAILVNAASNVLIQGITGKQGSFHFKQMRAF-GTNVVAGVAPGKGGNLFEG----VPLYE 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E +A+V+++P + DA +E+IEA I +IV ITE IPV D + + R + Sbjct: 56 TVQEACEHHRIDATVLFIPAAFCKDAALEAIEAGIKVIVIITEHIPVQDELIIVNRAKLK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + +IGPN G + CK+GI+P F G VG+++RSGTLTYE V + G+GQ++ Sbjct: 116 EAVIIGPNTFG-MASWKCKLGILPNVAFSPGPVGVVARSGTLTYEIVGSLTNVGIGQTSV 174 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGD V G+ F+D+L+ F D T+ +V+VGEIGG+AEEEAA+F+K KP+V Sbjct: 175 VGLGGDRVPGSSFVDMLKRFEVDPDTKCVVLVGEIGGNAEEEAAEFIK-----TMSKPVV 229 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++AGK+APPG+ MGHAGA+I GKG E K+ A+ AG +A P + + LLG Sbjct: 230 AYLAGKSAPPGKRMGHAGAIIERGKGTYEGKVKALTAAGAQVATFPYEVVEKVQTLLGR 288 >gi|297201854|ref|ZP_06919251.1| succinyl-CoA synthetase subunit alpha [Streptomyces sviceus ATCC 29083] gi|297147986|gb|EFH28821.1| succinyl-CoA synthetase subunit alpha [Streptomyces sviceus ATCC 29083] Length = 294 Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 145/300 (48%), Positives = 200/300 (66%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +DK++KV+VQG+TG G HT+ +L T +VGG++P+K T +PVF Sbjct: 1 MAIFLDKDSKVIVQGMTGATGMKHTK-LMLADGTNIVGGVNPRKAGTSVDIDGTEIPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TVAEA E+T AN SV++VPP+ A A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 TVAEAIEKTGANVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFYAYAVSQ 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA F+K+ KP Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAAAFIKENV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P + E+L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPTETAKLAREILA 293 >gi|282860914|ref|ZP_06269980.1| succinyl-CoA synthetase, alpha subunit [Streptomyces sp. ACTE] gi|282564650|gb|EFB70186.1| succinyl-CoA synthetase, alpha subunit [Streptomyces sp. ACTE] Length = 294 Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 140/300 (46%), Positives = 196/300 (65%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G HT+ +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLTKDSKVIVQGMTGATGMKHTK-LMLADGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 +V EA E+T A+ SV++VPP+ A A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 SVKEAMEKTGADVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAYAGAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AEE AA ++ KP Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPETDLIVMIGEIGGDAEERAADYIAKNV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P + E+L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPTETAKLAREILA 293 >gi|302524120|ref|ZP_07276462.1| succinyl-coa synthetase subunit alpha [Streptomyces sp. AA4] gi|302433015|gb|EFL04831.1| succinyl-coa synthetase subunit alpha [Streptomyces sp. AA4] Length = 296 Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 144/302 (47%), Positives = 195/302 (64%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI +++N+KV+VQGLTG G H + +L T +VGG++ +K T ++ VF Sbjct: 1 MSIFLNENSKVIVQGLTGSEGMKHATK-MLKSGTNIVGGVNARKAGQTVTIEGKDLTVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 TV EA + T A+ SVI+VPP A DA+IE+I+AEIPL V ITEGIPV D A Sbjct: 60 TVEEAIKETGADVSVIFVPPKFAKDAVIEAIDAEIPLAVVITEGIPVHDSAYFWAHAVAT 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R+IGPNCPG+++P GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGVISPGKSNAGIIPADITGAGPIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TAVGIGGDPV GT ID LE F D T+ IVM+GEIGG AEE AA ++K+ KP Sbjct: 178 TAVGIGGDPVIGTTHIDALEAFEKDADTKVIVMIGEIGGDAEERAAAYIKENV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ EL Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAVLARELYN 293 Query: 299 SL 300 SL Sbjct: 294 SL 295 >gi|29829994|ref|NP_824628.1| succinyl-CoA synthetase subunit alpha [Streptomyces avermitilis MA-4680] gi|29607104|dbj|BAC71163.1| putative succinyl-CoA synthetase alpha subunit [Streptomyces avermitilis MA-4680] Length = 294 Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 142/301 (47%), Positives = 199/301 (66%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++K++KV+VQG+TG G HT+ +L T +VGG++P+K T ++PVF Sbjct: 1 MAIFLNKDSKVIVQGMTGATGMKHTK-LMLADGTNIVGGVNPRKAGTSVDIDGTDIPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA E+T AN SV++VPP+ A A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 SVAEAIEKTGANVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAYAKSK 119 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +AVGIGGDP+ GT ID L F AD T+ IVM+GEIGG AEE AA F+ KP Sbjct: 178 SAVGIGGDPIIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAADFIAKNV----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P + +LG Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPTETAKLARAILG 293 Query: 299 S 299 S Sbjct: 294 S 294 >gi|313679918|ref|YP_004057657.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Oceanithermus profundus DSM 14977] gi|313152633|gb|ADR36484.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Oceanithermus profundus DSM 14977] Length = 289 Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 147/298 (49%), Positives = 200/298 (67%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K+T+VLVQG+TG+ G FH EQ Y T++V G+ P KG G VPV+ Sbjct: 1 MSILINKDTRVLVQGITGREGRFHAEQMQKY-GTKIVAGVTPGKGGQEVLG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +AS+++VP + A DA +E+ A +PL+V ITEGIP LDMV +++ Sbjct: 56 TVKEAVAHHGIDASIVFVPAAAAADAALEAAHAGVPLVVLITEGIPTLDMVAAVKEIKEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RLIG NCPG+++ + K+GIMPG +F+KG VG++SRSGTLTYEA S+ GLG +T Sbjct: 116 GVRLIGGNCPGLISAEESKLGIMPGHVFKKGRVGLISRSGTLTYEAAAALSEAGLGTTTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGDP+ GT F D+L LF D TE++V++GEIGGS EEEAA ++K+ KP+V Sbjct: 176 VGIGGDPIIGTTFKDLLPLFNEDPETEAVVVIGEIGGSDEEEAAAWVKEHM----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GF+ G++AP G+ MGHAGA+I G G E K+ A EA I +A + I + + LG Sbjct: 232 GFIGGRSAPKGKRMGHAGAIIMGDVGTPESKLKAFAEADIPVADTIDEIVELVKQRLG 289 >gi|240172865|ref|ZP_04751524.1| succinyl-CoA synthetase subunit alpha [Mycobacterium kansasii ATCC 12478] Length = 300 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 147/307 (47%), Positives = 198/307 (64%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN----- 55 M+I + K KV+VQG+TG T HT + +L T +VGG++ +K T T + Sbjct: 1 MAIFLTKENKVIVQGITGSEATVHTAR-MLKAGTHIVGGVNARKAGTTVTHEDKGGRLVK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +V EA E+T A+ S+I+VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVTEAMEKTGADVSIIFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 RLEKSS--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +R+IGPNCPGI+TP +GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNMQKGGKTRIIGPNCPGIITPGQALVGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKANVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALA 293 Query: 294 VELLGSL 300 E+L +L Sbjct: 294 REILKTL 300 >gi|159045033|ref|YP_001533827.1| succinyl-CoA synthetase subunit alpha [Dinoroseobacter shibae DFL 12] gi|157912793|gb|ABV94226.1| ADP-forming succinyl-CoA ligase [Dinoroseobacter shibae DFL 12] Length = 299 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 140/301 (46%), Positives = 201/301 (66%), Gaps = 13/301 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I++ ++T+V+VQGL+G+ G FH ++ I Y T+VV G+ P KG T +N PVF Sbjct: 1 MAIVITEDTRVVVQGLSGRIGQFHAQEMIEY-GTKVVAGVTPGKGGTTV----LNRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E T A AS+++VPP+GA DA++E+ +A I VC+T+GIP DM+RVK L + Sbjct: 56 TVREAVEATGAEASLLFVPPAGAADAMMEAADAGIRTAVCVTDGIPAQDMMRVKRFLRRF 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 RLIGPNC GI++P +GIMP I+ G VGI+ RSGTL YEA Q G+G Sbjct: 116 PRERKMRLIGPNCAGIISPGKGFMGIMPPHIYTPGRVGIVGRSGTLGYEAASQMQALGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+++GIGGDP+ G+ F D+LELF AD T++++M+GEIGG E EAA +++D Sbjct: 176 VSSSIGIGGDPINGSSFKDILELFEADPETDAVIMIGEIGGPQEAEAAAYVRDHM----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+ ++AG AP GR MGHAGA+IS A++K+ + GI +AP+P+ +G ++ + Sbjct: 232 KPVAAYIAGLAAPKGRQMGHAGAIISAFGESAQEKVALLSACGIEVAPNPSAMGETVARI 291 Query: 297 L 297 L Sbjct: 292 L 292 >gi|260907285|ref|ZP_05915607.1| succinyl-CoA synthetase subunit alpha [Brevibacterium linens BL2] Length = 298 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 147/305 (48%), Positives = 207/305 (67%), Gaps = 14/305 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++ ++K++VQG+TG GT HT + +L + VVGG++ +K T G V Sbjct: 1 MSIFLNSDSKIIVQGITGGEGTKHTAR-MLAAGSNVVGGVNARKAGTTVKHNDKDGNEVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +V+EA E T A+ SV +VPP+ + DA IE+I+A+I L+V ITEGIPV D V A Sbjct: 60 LPVFGSVSEAMEATGADVSVAFVPPAFSKDAAIEAIDAKIGLLVIITEGIPVQDAAEVWA 119 Query: 116 RLE--KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 R + +++R+IGPNCPGI++P++ GI+P +I +KG +G++S+SGTLTY+ +++ Sbjct: 120 RAQAADNATRIIGPNCPGIISPEASLAGIIPANITKKGKLGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID LE F D TE+IVM+GEIGG AEE AA ++KD Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDALEAFENDPETEAIVMIGEIGGDAEERAAAYIKDNV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P + Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPTETADLM 293 Query: 294 VELLG 298 ELL Sbjct: 294 RELLA 298 >gi|119717811|ref|YP_924776.1| succinyl-CoA synthetase subunit alpha [Nocardioides sp. JS614] gi|119538472|gb|ABL83089.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Nocardioides sp. JS614] Length = 297 Score = 262 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 138/304 (45%), Positives = 199/304 (65%), Gaps = 11/304 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI ++K++K++VQG+TG G+ HT ++ + +VGG++ +K T G ++PV+ Sbjct: 1 MSIYLNKDSKIIVQGMTGGMGSKHTT-LMVEAGSNIVGGVNARKAGTSIELGGKDLPVYG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA T A+ SV++VPP+ DA IE+I+A I L+V ITEG+PV D V A L+ Sbjct: 60 TVKEAMAETGADVSVVFVPPAFTKDACIEAIDAGIALLVVITEGVPVQDTAEVFAYLQSA 119 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 +R+IGPNCPG++TP GI P +I G VG++S+SGTLTY+ +++ G Sbjct: 120 ANTGGTRMIGPNCPGVITPGEALAGITPATIAGSGPVGLVSKSGTLTYQMMYELRDH--G 177 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 STA+GIGGDP+ GT ID L F AD T++IVM+GEIGG AEE AA ++K+ Sbjct: 178 FSTAIGIGGDPIIGTTHIDALAAFEADPDTKAIVMIGEIGGDAEERAAAYIKEHV----T 233 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ G+ + +P+ + E+ Sbjct: 234 KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAVGVKVGKTPSETAELMREV 293 Query: 297 LGSL 300 L SL Sbjct: 294 LASL 297 >gi|78357377|ref|YP_388826.1| succinyl-CoA synthetase (ADP-forming) subunit alpha / succinyl-CoA synthetase (ADP-forming) subunit beta [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219782|gb|ABB39131.1| succinyl-CoA synthetase (ADP-forming) alpha subunit / succinyl-CoA synthetase (ADP-forming) beta subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 700 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 132/293 (45%), Positives = 185/293 (63%), Gaps = 8/293 (2%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 +D ++ VLVQGLTG+ H + Y T+VV G+ P KG G +PV+ +V E Sbjct: 413 LDSSSGVLVQGLTGRVAQRHAALMMEY-GTRVVAGVTPFKGGQEVMG----IPVYDSVHE 467 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 A +AS+I+VP + A DA++E+ EIP +VCITEGIP M+ ++ S + + Sbjct: 468 ACRHHRIDASIIFVPAAFAPDAVLEAAAEEIPWVVCITEGIPQAAMLSALKNIQPSPTCV 527 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPN PGI+ P KIGIMPG +F G V + SRSGTLTYEA + S G+GQS VG+G Sbjct: 528 VGPNTPGIVVPHQLKIGIMPGYVFSPGPVAVFSRSGTLTYEAASRLSAAGIGQSVCVGVG 587 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 GD GT F+D+ E D AT +++++GE+GG AEEE A++++ + G KP+V FVA Sbjct: 588 GDSFVGTGFVDLCERVRHDAATRAVLVLGEVGGRAEEELAEYVR---RTGFSKPVVSFVA 644 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +TAPPGR +GHAGA++ GG E K+ AM+EAG I P A + R + +L Sbjct: 645 ARTAPPGRRLGHAGAILDETTGGVEAKLQAMREAGFTICPDLASLPRIMRAVL 697 >gi|289427572|ref|ZP_06429284.1| succinyl-CoA synthetase, alpha subunit [Propionibacterium acnes J165] gi|289159063|gb|EFD07255.1| succinyl-CoA synthetase, alpha subunit [Propionibacterium acnes J165] gi|313808726|gb|EFS47180.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL087PA2] gi|313817906|gb|EFS55620.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL046PA2] gi|313819818|gb|EFS57532.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL036PA1] gi|313823308|gb|EFS61022.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL036PA2] gi|313824783|gb|EFS62497.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL063PA1] gi|314925812|gb|EFS89643.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL036PA3] gi|314960755|gb|EFT04856.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL002PA2] gi|314979798|gb|EFT23892.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL072PA2] gi|314986168|gb|EFT30260.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL005PA2] gi|314988780|gb|EFT32871.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL005PA3] gi|315083286|gb|EFT55262.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL027PA2] gi|315086941|gb|EFT58917.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL002PA3] gi|315090032|gb|EFT62008.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL072PA1] gi|327325062|gb|EGE66868.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL096PA3] gi|327449260|gb|EGE95914.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL013PA2] gi|328756395|gb|EGF70011.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL020PA1] gi|332676153|gb|AEE72969.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Propionibacterium acnes 266] Length = 297 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 141/302 (46%), Positives = 196/302 (64%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 M+I++D+N+K++VQG+TG G HT Q +L T VVGG++P+K T G VPV+ Sbjct: 1 MAIILDQNSKIIVQGMTGSEGMKHT-QRMLNSGTAVVGGVNPRKAGTTVDFNGGTTVPVY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V +A E T AN SVI+VP A++E+IEAE+PL+VCITEG+PV D ++ Sbjct: 60 GSVKQAVEATGANVSVIFVPAKFTKSAVMEAIEAEMPLVVCITEGVPVKDTAEFFTAAQR 119 Query: 120 SS-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S +R+IGPNCPGI++P GI+P I G VG++S+SGTLTY+ +++ LG S Sbjct: 120 SGKTRIIGPNCPGIISPGKSNAGIVPADITGPGRVGLVSKSGTLTYQLMYEVRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA+++ + KP Sbjct: 178 TAIGIGGDPIIGTTHIDALQAFQDDPETDIIVMIGEIGGDAEERAAKYISEHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SG G A K A+ G+ + +P R E + Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALDAVGVRVGKTPTETARLAHEAME 293 Query: 299 SL 300 SL Sbjct: 294 SL 295 >gi|195162297|ref|XP_002021992.1| GL14403 [Drosophila persimilis] gi|194103890|gb|EDW25933.1| GL14403 [Drosophila persimilis] Length = 323 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 148/300 (49%), Positives = 205/300 (68%), Gaps = 23/300 (7%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K TK+LVQG TGK TFH+++A+ Y T VVGG+ PKKG T PVF + Sbjct: 31 NLKINKETKLLVQGFTGKQATFHSQEALKY-GTNVVGGVSPKKGGTKHLDK----PVFKS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 VAEA + +A+VI++PPS A D I +IE+EI LIV ITEGIP +DMVR+ L + Sbjct: 86 VAEATKELKPDATVIFIPPSNAADGIRSAIESEIGLIVAITEGIPQVDMVRIMQMLNCQE 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI++PD CKIGIMPG I ++G T++ GLGQ+ Sbjct: 146 KSRLLGPNCPGIISPDQCKIGIMPGDIHKRGC-----------------TTKTGLGQTLC 188 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +G GGDP GT FID L++FL+D T+ I+++GEIGGSAEE+AA+FLK + KP+V Sbjct: 189 IGCGGDPFNGTNFIDGLKIFLSDPETKGIILIGEIGGSAEEDAAEFLKQHNSGCKAKPVV 248 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG+TAPPGR MGHAGA+I+GGKG A K+ A+++AG+ ++ +P +G +L + + L Sbjct: 249 SFIAGQTAPPGRRMGHAGAIIAGGKGTAPAKVKALEKAGVIVSQNPCHMGSTLYKEMLRL 308 >gi|254571903|ref|XP_002493061.1| Alpha subunit of succinyl-CoA ligase [Pichia pastoris GS115] gi|238032859|emb|CAY70882.1| Alpha subunit of succinyl-CoA ligase [Pichia pastoris GS115] gi|328352924|emb|CCA39322.1| succinyl-CoA synthetase alpha subunit [Pichia pastoris CBS 7435] Length = 320 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 164/293 (55%), Positives = 211/293 (72%), Gaps = 7/293 (2%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 V+ +TKV+ QG TGK GTFH +QAI Y TQVVGG +PKK G +PVF VA+ Sbjct: 25 VNSSTKVIFQGFTGKQGTFHAQQAIDY-GTQVVGGTNPKKAGQLHLG----LPVFKNVAD 79 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSR 123 A + A AS I+VPPS A AI E++EAEIPL VCITEGIP DM+RV L+ +S +R Sbjct: 80 AVRQAGATASGIFVPPSIAAAAIEEAVEAEIPLAVCITEGIPQHDMLRVADILKSQSKTR 139 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPNCPGI+ P+ CKIGIMPG I +KG +GI+S+SGTLTYEAV QT+ GLGQ+ +G+ Sbjct: 140 LVGPNCPGIIAPEQCKIGIMPGFIHKKGKIGIVSKSGTLTYEAVSQTTNVGLGQNLVIGV 199 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK-RGRKKPIVGF 242 GGD + GT ++V+ L+L D E I+M+GEIGG+AE EAA+ +K KP V F Sbjct: 200 GGDSIPGTNLLEVVNLYLNDPEVEGIIMIGEIGGTAEIEAAELIKQHNSTVSVPKPFVSF 259 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 +AG TAPPGR MGHAGA+ISGGKG A+ KI A++ AG+ ++PSP R+G+ L + Sbjct: 260 IAGVTAPPGRRMGHAGAIISGGKGDAKSKIAALESAGVIVSPSPGRLGKLLYD 312 >gi|47523876|ref|NP_999574.1| succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial [Sus scrofa] gi|2258467|gb|AAB94004.1| succinyl-CoA synthetase alpha subunit [Sus scrofa] Length = 350 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 164/315 (52%), Positives = 210/315 (66%), Gaps = 23/315 (7%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QG TGK GTFH++QA+ Y V G ++ +PVF TV Sbjct: 37 LYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGT-----TPGKGGKTHLGLPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+I+AE+PL+VCITEGIP DMVRVK RL + Sbjct: 92 KEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGK 151 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIF-----------------RKGSVGILSRSGTLTY 164 +RLIGPNCPG++ + +F R +GI+SRSGTLTY Sbjct: 152 TRLIGPNCPGVINRFLRFAVYITSRVFTCTQQEEYRKIPLLFGTRSIHMGIVSRSGTLTY 211 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 EAV QT+Q GLGQS VGIGGDP GT+F D LE+FL D ATE I+++GEIGG+AEE AA Sbjct: 212 EAVHQTTQVGLGQSLCVGIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAA 271 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 +FLK + KP+V F+AG TAPPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ Sbjct: 272 EFLKQHNSGPKSKPVVSFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVVSM 331 Query: 285 SPARIGRSLVELLGS 299 SPA++G ++ + Sbjct: 332 SPAQLGTTIYKEFEK 346 >gi|297566585|ref|YP_003685557.1| succinyl-CoA synthetase subunit alpha [Meiothermus silvanus DSM 9946] gi|296851034|gb|ADH64049.1| succinyl-CoA synthetase, alpha subunit [Meiothermus silvanus DSM 9946] Length = 290 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 152/299 (50%), Positives = 198/299 (66%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDKNTKVLVQG+TG+ G FHTEQ + T VV G+ P KG G VPV+ Sbjct: 1 MSILVDKNTKVLVQGITGREGAFHTEQMM-KAGTSVVAGMTPGKGGQTALG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA +AS+I+VP GA DA +E+ A IPL+V ITEGIP LDMV+ A ++ Sbjct: 56 TVKEATTHHHIDASIIFVPAPGAADAALEAAHAGIPLVVLITEGIPTLDMVKAVAEIKAM 115 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RLIG NCPG++TP CK+GIMP ++F++G VG++SRSGT+TYE S G G ST Sbjct: 116 GNVRLIGGNCPGLITPGECKLGIMPANVFKRGKVGLISRSGTVTYETAKALSDAGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT F D+L LF D TE++V+ GEIGGS EE+AA+++K KKP+ Sbjct: 176 CIGIGGDPIIGTTFKDLLPLFNEDPETEAVVICGEIGGSDEEDAAEYIKARM----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+ G++AP G+ MGHAGA+I G G E K+ A +A + +A + I + LG Sbjct: 232 VGFIGGRSAPKGKKMGHAGAIIMGNVGTPESKLAAFADADVPVADTIDDIVELVRAKLG 290 >gi|296140991|ref|YP_003648234.1| succinyl-CoA synthetase, subunit alpha [Tsukamurella paurometabola DSM 20162] gi|296029125|gb|ADG79895.1| succinyl-CoA synthetase, alpha subunit [Tsukamurella paurometabola DSM 20162] Length = 300 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 148/307 (48%), Positives = 199/307 (64%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 M+I + K+ KV+VQG+TG GT HT +L T VVGG++ +K T G V Sbjct: 1 MAIFLTKDNKVIVQGITGGEGTKHTA-LMLKAGTNVVGGVNARKAGTTVSHTDKDGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+ +VPP+ + DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAIEKTGADTSIAFVPPAFSKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +R+IGPNCPGI+TP +GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 YNVDKGQKTRIIGPNCPGIITPGEALVGITPNNITGTGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTAIGIGGDPVIGTTHIDAIEAFEKDPNTKVIVMIGEIGGDAEERAADYIKANV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 236 --TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILQSL 300 >gi|218885135|ref|YP_002434456.1| succinyl-CoA synthetase, subunit alpha [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756089|gb|ACL06988.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 709 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 130/296 (43%), Positives = 183/296 (61%), Gaps = 8/296 (2%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 + +T+VLVQG+TGK H Q + T +V G+ P KG G VPV+ +V Sbjct: 419 WLGPDTQVLVQGITGKVAQRHV-QLMQEYGTHIVAGVTPFKGGQSVLG----VPVYDSVH 473 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 EA +AS+I+VP A DA++E+ EIP VCITEGIP M+ + S +R Sbjct: 474 EACRHHRIDASIIFVPAPFAPDAVMEAAAEEIPWAVCITEGIPQRAMLSALKNVPPSPTR 533 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 +IGPN PGI+ P + KIGIMPG +F G V I SRSGTLTYEA + S G+GQS G+ Sbjct: 534 VIGPNTPGIIVPGATKIGIMPGYVFTPGPVAIFSRSGTLTYEAAARLSAAGIGQSFCAGV 593 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGD G++FI + E D+ATE+++++GE+GG+AEE+ A+++ G KP++GF+ Sbjct: 594 GGDSFIGSDFISLFECIRDDDATEAVLVLGEVGGTAEEDLARWVTA---TGFAKPVLGFI 650 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 A +TAPPGR MGHAGA++ GG + K+ AM++AG + P A + + LG Sbjct: 651 AARTAPPGRRMGHAGAILDEATGGVDGKLQAMRDAGFAVCPDLASLPERVARALGR 706 >gi|13541104|ref|NP_110792.1| succinyl-CoA synthetase subunit alpha [Thermoplasma volcanium GSS1] gi|14324488|dbj|BAB59416.1| succinyl-CoA ligase [Thermoplasma volcanium GSS1] Length = 285 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 130/293 (44%), Positives = 186/293 (63%), Gaps = 9/293 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 +L+DKNTKV+VQG+TG G+FHT + +L T VV GI P KG T + VP+ +V Sbjct: 2 VLIDKNTKVIVQGITGHQGSFHTGE-MLKFGTNVVAGIAPGKGGTKFADK---VPIVNSV 57 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 AEA + +A++I VP DA E+I+ + ++ +TE +P D + + + + Sbjct: 58 AEAMQY-EPDATMISVPAPFVKDAAYEAIDNGLKIVYILTEHVPYQDTMEIVKEAQLRNI 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GPN PGI P KIGIMP IF++G V + SRSGTLTYE V+ ++ G+G+ST +G Sbjct: 117 TVLGPNGPGITVPFESKIGIMPNHIFKEGDVAVASRSGTLTYEIVYAITKAGMGESTVIG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GGD V G FIDVL++F D T+ IV+VGEIGG+ EE AA+++K K+ V + Sbjct: 177 LGGDRVVGLSFIDVLKMFENDPKTKKIVLVGEIGGNNEELAAEYIKKNVKKKV----VAY 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 +AG++APPG+ MGHAGA+I G G AE K+ A AG+ +A P I + L E Sbjct: 233 IAGRSAPPGKRMGHAGAIIERGVGTAESKLKAFNSAGVKVADYPQDIPKLLEE 285 >gi|310793505|gb|EFQ28966.1| succinate-CoA ligase [Glomerella graminicola M1.001] Length = 329 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 140/298 (46%), Positives = 197/298 (66%), Gaps = 7/298 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +DKNT+V+ QG TGKA I Y T +VGG+ P KG +++P+F T Sbjct: 35 NLRIDKNTRVIYQGFTGKAACERLLHTIEY-GTNIVGGVSPGKGGQTH----LSLPLFNT 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 EA + +AS ++VP A AIIE+IEAE+PL+V + E +P+ DM RV L+ ++ Sbjct: 90 AEEAMKAVNPHASAVFVPAQFAASAIIEAIEAEVPLVVSVAEHVPIHDMARVHEVLKAQN 149 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ PD C+IGIMP + KG +GI+S+SGTL+YEAV T++ GLGQS Sbjct: 150 KTRLVGPNCPGIIAPDQCRIGIMPYKQYTKGVIGIVSKSGTLSYEAVGATTKAGLGQSIV 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPI 239 VG+GGD + GT +D L+LF D T+ I+++GEIGG AE AA+ +K + KPI Sbjct: 210 VGMGGDLMPGTTLLDGLKLFFDDVETKGIIVIGEIGGEAELRAAEAIKAYRESTSSPKPI 269 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V VAG+TAPPG+TMGHAGA++S G A+ K+ A+++AG I P P +G + LL Sbjct: 270 VAMVAGRTAPPGKTMGHAGAILSPGDVSADVKVKALRDAGAIIVPHPGTMGTEMKRLL 327 >gi|126178790|ref|YP_001046755.1| succinyl-CoA synthetase, alpha subunit [Methanoculleus marisnigri JR1] gi|125861584|gb|ABN56773.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methanoculleus marisnigri JR1] Length = 288 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 133/299 (44%), Positives = 183/299 (61%), Gaps = 16/299 (5%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ----TQVVGGIHPKKGSTYWTGGNVNVPV 58 I DKN V+VQ +TG+ GTFHTE Y + VV G+ P K G VPV Sbjct: 2 IYGDKNLGVIVQNITGRQGTFHTELMNAYAREVGGRGVVAGVAPGKAGREVHG----VPV 57 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TV EA A ASV++VP AGDA++E+ A I L V ITE IPV D + A + Sbjct: 58 YNTVKEALAEHDATASVVFVPAGAAGDAVMEAAHAGIELAVVITEHIPVHDAMSAIAYAK 117 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPG+L+P CK+GIMP + R+G+VG++SRSGTLTYE + ++ G+GQS Sbjct: 118 LHDCTVIGPNCPGLLSPGECKLGIMPAHLARRGNVGVVSRSGTLTYEVFDELTRAGIGQS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV G F+DVL F D T++++++GE+GG+ EEE + P Sbjct: 178 TIVGIGGDPVIGQTFVDVLARFDEDPHTKAVIVIGEVGGNLEEEGVR--------STDLP 229 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +V ++AG +APP + MGHAGA+I GG+G A K+ ++ I +A P+ I + E+L Sbjct: 230 VVTYIAGVSAPPEKRMGHAGAIIEGGEGDARSKVRRLRALEIPVASRPSEIPGLIREVL 288 >gi|258651503|ref|YP_003200659.1| succinyl-CoA synthetase subunit alpha [Nakamurella multipartita DSM 44233] gi|258554728|gb|ACV77670.1| succinyl-CoA synthetase, alpha subunit [Nakamurella multipartita DSM 44233] Length = 293 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 140/300 (46%), Positives = 196/300 (65%), Gaps = 9/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + ++++V+VQG+TG GT HT + +L T +VGG++ +K T PVF Sbjct: 1 MAIFLTESSRVIVQGMTGSEGTKHTRR-MLASGTNIVGGVNARKAGTTVDFDGSAQPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA ++T A+ SV++VPP+ DAIIE+I+A+I L V ITEG+PV D A K+ Sbjct: 60 SVAEAMDKTGADVSVLFVPPAFTKDAIIEAIDAQIGLAVVITEGVPVHDTAYAWAYAVKT 119 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPGI++P GI+P I G VG++S+SGTLTY+ +++ LG S Sbjct: 120 GNATRIIGPNCPGIISPGKSNAGIIPADITGPGRVGLVSKSGTLTYQMMYELRD--LGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L F D TE+IVM+GEIGG AEE AA F+ D KP Sbjct: 178 TAIGIGGDPIIGTTHIDALAAFEQDPETEAIVMIGEIGGDAEERAAAFIADNVS----KP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A+ K A++ G+ + +P+ R L +G Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKQEALEAVGVKVGKTPSETARLLRAAIG 293 >gi|227650|prf||1708208A succinyl CoA synthetase Length = 288 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 157/296 (53%), Positives = 201/296 (67%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ILV++ T+VLVQ +TG+ G FHT+Q + Y T++V G+ P KG T G VPV+ TV Sbjct: 2 ILVNRETRVLVQCITGREGQFHTKQMLDY-GTKIVAGVTPGKGGTEVLG----VPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA +AS+I+VP A DA +E+ A IPLIV ITEGIP LDMVR ++ S Sbjct: 57 KEAVAHHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIG NCPGI++ + KIGIMPG +F++G VGI+SRSGTLTYEA SQ GLG +T VG Sbjct: 117 RLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEAAAALSQAGLGTTTTVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV GT F D+L LF D TE++V++GEIGGS EEEAA ++KD KKP+VGF Sbjct: 177 IGGDPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKDHM----KKPVVGF 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + G++AP G+ MGHAGA+I G G E K+ A EAGI +A + I + + LG Sbjct: 233 IGGRSAPKGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADTIDEIVELVKKALG 288 >gi|300742289|ref|ZP_07072310.1| succinyl-CoA synthetase, alpha subunit [Rothia dentocariosa M567] gi|311112206|ref|YP_003983428.1| succinyl-CoA synthetase subunit alpha [Rothia dentocariosa ATCC 17931] gi|300381474|gb|EFJ78036.1| succinyl-CoA synthetase, alpha subunit [Rothia dentocariosa M567] gi|310943700|gb|ADP39994.1| succinyl-CoA synthetase subunit alpha [Rothia dentocariosa ATCC 17931] Length = 305 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 145/311 (46%), Positives = 207/311 (66%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI V+K++KV+VQG+TG GT HT + +L T +VGG++ +K T T G +V Sbjct: 1 MSIFVNKDSKVIVQGITGGEGTKHTAR-MLAAGTNIVGGVNARKAGTTVTHKAKDGSDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 + VF TVAEA T A+ S+++VPP+ A++E+IEA+I L+V ITEG+PV D A Sbjct: 60 LKVFGTVAEAIAETGADVSIVFVPPAFTKAAVLEAIEAKIGLVVVITEGVPVQDTAEFWA 119 Query: 116 RLE-------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + K +R+IGPNCPGI+TP+ C +GI P +I KG +G++S+SGTLTY+ +F Sbjct: 120 AAKASVDENGKQITRIIGPNCPGIITPEECLVGITPANITGKGKIGLVSKSGTLTYQMMF 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + + +G +TA+GIGGDP+ GT ID LE F AD TE IVM+GEIGG AEE AA+++K Sbjct: 180 ELAD--IGFTTAIGIGGDPIIGTTHIDALEAFEADPETEGIVMIGEIGGDAEERAAEYIK 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 238 ANV----TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSE 293 Query: 289 IGRSLVELLGS 299 + E+ + Sbjct: 294 AANLMREIFAN 304 >gi|226195|prf||1414360A succinyl-CoA synthetase alpha Length = 288 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 156/296 (52%), Positives = 200/296 (67%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ILV++ T+VLVQG+TG+ G FHT+Q + Y T++V G+ P KG T G VPV+ TV Sbjct: 2 ILVNRETRVLVQGITGREGQFHTKQMLDY-GTKIVAGVTPGKGGTEVLG----VPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA +AS+I+VP A DA +E+ A IPLIV ITEGIP LDMVR ++ S Sbjct: 57 KEAVAHHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIG NCPGI++ + KIGIMPG +F++G VGI+SRSGTLTYEA SQ GLG +T VG Sbjct: 117 RLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEAAAALSQAGLGTTTTVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV F D+L LF D TE++V++GEIGGS EEEAA ++KD KKP+VGF Sbjct: 177 IGGDPVITGTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKDHM----KKPVVGF 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + G++AP G+ MGHAGA+I G G E K+ A EAGI +A + I + + LG Sbjct: 233 IGGRSAPKGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADTIDEIVELVKKALG 288 >gi|134103098|ref|YP_001108759.1| succinyl-CoA synthetase subunit alpha [Saccharopolyspora erythraea NRRL 2338] gi|133915721|emb|CAM05834.1| succinyl-coa synthetase alpha chain [Saccharopolyspora erythraea NRRL 2338] Length = 288 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 131/300 (43%), Positives = 189/300 (63%), Gaps = 15/300 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++ N+KV+VQG+TG GT HT + +L T +VGG++ +K + VF Sbjct: 1 MAIFLNDNSKVIVQGITGSEGTKHTAR-MLRAGTNIVGGVNARKAGQVVEIEGKQLTVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 +V EA + T A+ SV++VPP A DA+IE+I+AEIPL V ITEGIPV D A Sbjct: 60 SVQEAMKETGADVSVLFVPPKFAKDAVIEAIDAEIPLAVVITEGIPVHDSAYFWAHANAT 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + +R++GPNCPG+++P GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIVGPNCPGVISPGKSNAGIIPADITGPGKIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID L+ F D TE+ IGG AEE AA ++K KP Sbjct: 178 TCVGIGGDPIIGTTHIDALQAFQDDPETEA------IGGDAEERAADYIKANI----TKP 227 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ + + E++G Sbjct: 228 VVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAKLMREVIG 287 >gi|115491467|ref|XP_001210361.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114197221|gb|EAU38921.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 577 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 125/304 (41%), Positives = 193/304 (63%), Gaps = 12/304 (3%) Query: 2 SILVDKNTKVLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPV 58 ++ + +T+VL QG TG T + ++++ + T++VGG+ P G ++ +PV Sbjct: 40 NLKIGAHTRVLFQGFTGTSAPTATANVKESLAW-GTKIVGGVKPG-----VEGEHLGLPV 93 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 F +V A+E+ +AS IYVP + AI E++EAEIPL+V + E +P+ DM+R+ + L+ Sbjct: 94 FPSVKAAQEKARPDASAIYVPGNQTAQAIEEAVEAEIPLVVAVAEHVPIHDMLRIHSMLK 153 Query: 119 -KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 +S +RL+G NCPGI++ C+IG P F G VGI+++SGTL+YE V T++ GLG Sbjct: 154 TQSKTRLVGANCPGIISAIGKCRIGFQPLPCFAPGKVGIVAKSGTLSYETVASTTRAGLG 213 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GR 235 QS + +GGD + GT F+D L++F D TE +++VGEIGG+AE +AA+++KD +R Sbjct: 214 QSLCISMGGDVLAGTNFVDALKIFEDDPDTEGMIIVGEIGGTAEMDAAEWIKDYNRRTAN 273 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KPI+ V G AP GR MGHAGA + G+ G E+K A++ AG + P + G + Sbjct: 274 PKPIMALVGGLYAPSGRIMGHAGAWTAIGEPGPEEKYQALERAGAVMVNHPEKFGERMKT 333 Query: 296 LLGS 299 LL S Sbjct: 334 LLAS 337 >gi|293189083|ref|ZP_06607809.1| succinyl-CoA synthetase subunit alpha [Actinomyces odontolyticus F0309] gi|292821928|gb|EFF80861.1| succinyl-CoA synthetase subunit alpha [Actinomyces odontolyticus F0309] Length = 306 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 142/313 (45%), Positives = 195/313 (62%), Gaps = 21/313 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--------- 51 M+I V+ +T+V+VQG+TG G HT Q +L T +VGG +P+K T T Sbjct: 1 MTIFVNSDTRVIVQGMTGAEGRKHT-QRMLSAGTAIVGGTNPRKAGTTVTFDVQGYGPGV 59 Query: 52 -----GNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G V VPVF TVAEA+E T ANASVI+VPP+ A A +E+I+A I IV ITEGIP Sbjct: 60 DKVTDGQVEVPVFGTVAEAREATGANASVIFVPPAFAKGAALEAIDAGIETIVLITEGIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D V R + RLIGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VQDSTIVVERALAAGVRLIGPNCPGIISPGQANLGITPADITGPGRLGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ G +T +GIGGDPV GT ID L F AD T+ ++M+GEIGG AEE AA + Sbjct: 180 MYELRD--FGFTTCLGIGGDPVVGTTHIDALAAFEADPDTDLVIMIGEIGGDAEERAAAW 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +++ KP+V ++AG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IQENM----TKPVVAYIAGFTAPEGKTMGHAGAIVSGSSGTAAAKAEALEAVGVRVGRTP 293 Query: 287 ARIGRSLVELLGS 299 ++ + E+L Sbjct: 294 SQTAQIAREILSR 306 >gi|291295750|ref|YP_003507148.1| succinyl-CoA synthetase subunit alpha [Meiothermus ruber DSM 1279] gi|290470709|gb|ADD28128.1| succinyl-CoA synthetase, alpha subunit [Meiothermus ruber DSM 1279] Length = 290 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 150/299 (50%), Positives = 200/299 (66%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K+T+V+VQG+TG+ G FHTE A++ T+VV G+ P KG G VPV+ Sbjct: 1 MSILVNKDTQVIVQGITGREGAFHTE-AMMKAGTKVVAGVTPGKGGQTMLG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA +AS+I+VP A DA +E+ A IPL+V ITEGIP LDMV+ A ++ Sbjct: 56 TVKEATAHHRVDASIIFVPAPAAADAALEAAHAGIPLVVLITEGIPTLDMVKAVAEIKAM 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + RLIG NCPG++TP+ CK+GIMP S+F+KG VG++SRSGT+TYE S G G ST Sbjct: 116 QNVRLIGGNCPGLITPEECKLGIMPASVFKKGRVGLISRSGTVTYETAKALSDAGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT F D+L LF D T ++V+ GEIGGS EE+AA ++K+ KKP+ Sbjct: 176 CIGIGGDPIIGTTFKDLLPLFNEDPETHAVVLCGEIGGSDEEDAAAYVKEHM----KKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 VGF+ G++AP G+ MGHAGA+I G G E K+ A EA I +A + I + LG Sbjct: 232 VGFIGGRSAPKGKKMGHAGAIIMGSVGTPESKLAAFAEANIPVADTIDDIVELVRAKLG 290 >gi|242279515|ref|YP_002991644.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242122409|gb|ACS80105.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 698 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 123/294 (41%), Positives = 187/294 (63%), Gaps = 9/294 (3%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 +DK+T +LVQG+TG G HT+ + Y + +V G+ P KG G VPV+ ++ E Sbjct: 409 IDKDTPILVQGITGAEGRLHTKLMLEY-GSNIVAGVTPFKGGQEVLG----VPVYNSIKE 463 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 A+ AS+I+VPP A DAI+E+ E+P +VCITEGI M+ V +++ +R+ Sbjct: 464 AQRHHEIGASIIFVPPKLATDAILEAASCEVPWVVCITEGIVQSAMLNVLEQIKGGKTRI 523 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPN PG++ P KIGI+P + F G V +LSRSGTLTYE + +Q G+GQS ++GIG Sbjct: 524 VGPNTPGMIVPGQTKIGILPTTPFSPGPVAVLSRSGTLTYEVADRLNQVGIGQSLSIGIG 583 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 GD GT F DV E+ + T++++++GEIGG+AE++ A ++ + G KP++ F+A Sbjct: 584 GDSYIGTTFADVFEMLRNHDETKAVMVLGEIGGTAEQDLADYVIE---TGFDKPVLSFIA 640 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G+TAPPG+ +GHAGA++ G G + K+ M+ AG + PS I + + LG Sbjct: 641 GQTAPPGKRLGHAGAILQEGTG-VQGKLEKMRAAGFTVCPSLESIPQLTADALG 693 >gi|118462581|ref|YP_880329.1| succinyl-CoA synthetase subunit alpha [Mycobacterium avium 104] gi|118163868|gb|ABK64765.1| succinyl-CoA synthetase alpha chain [Mycobacterium avium 104] Length = 300 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 150/307 (48%), Positives = 202/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQVVGG++ +K T + G +V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHTA-LMLKAGTQVVGGVNARKAGTTVSHVDPVGKDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV+EA + T AN SV++VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGTVSEAMKETGANVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +R+IGPNCPGI+TP GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 YNVDKGQKTRIIGPNCPGIITPGEALAGITPANISGPGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G ST++GIGGDP+ GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTSIGIGGDPIIGTTHIDAIEAFEKDPDTKIIVMIGEIGGDAEERAADYIKAHVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILQSL 300 >gi|258404678|ref|YP_003197420.1| succinyl-CoA synthetase, alpha subunit [Desulfohalobium retbaense DSM 5692] gi|257796905|gb|ACV67842.1| succinyl-CoA synthetase, alpha subunit [Desulfohalobium retbaense DSM 5692] Length = 696 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 130/294 (44%), Positives = 182/294 (61%), Gaps = 9/294 (3%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + N VLVQGLTG+ G H Y T +V G+ P KG G +PV+ +VAE Sbjct: 412 LSPNAPVLVQGLTGREGRLHARLMREY-GTNIVAGVTPFKGGGTVDG----LPVYNSVAE 466 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 A + AS+I+VP A +A++E+ +A IP VC+TEGIP ++ +L + +R Sbjct: 467 ATRHHSIAASIIFVPARFATEAMLEARQAGIPWAVCVTEGIPQAQILPALPQLNQGPTRF 526 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPN PG + P K+GIMP + F G V +LSRSGTLTYE V + +Q GLGQS GIG Sbjct: 527 IGPNTPGFIRPGHMKVGIMPVTAFTPGPVAVLSRSGTLTYECVARLTQAGLGQSFCFGIG 586 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 GDP G+ F+D+ L D TE+++++GEIGG AE++ A +++ K G KPIV F+A Sbjct: 587 GDPFVGSSFVDLCALLENDPQTEAVLILGEIGGQAEQDLAAWVQ---KTGFPKPIVSFIA 643 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G+TAPPG+ +GHAGA++ G + AE K+ +M+ AG I P A I +L + L Sbjct: 644 GQTAPPGKKLGHAGAILEGAQSNAE-KLESMRAAGFGICPDLASIPEALRQALS 696 >gi|154509658|ref|ZP_02045300.1| hypothetical protein ACTODO_02191 [Actinomyces odontolyticus ATCC 17982] gi|153799292|gb|EDN81712.1| hypothetical protein ACTODO_02191 [Actinomyces odontolyticus ATCC 17982] Length = 306 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 142/313 (45%), Positives = 195/313 (62%), Gaps = 21/313 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--------- 51 M+I V+ +T+V+VQG+TG G HT Q +L T +VGG +P+K T T Sbjct: 1 MTIFVNSDTRVIVQGMTGAEGRKHT-QRMLSAGTAIVGGTNPRKAGTTVTFDVQGYGPGA 59 Query: 52 -----GNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G V VPVF TVAEA+E T ANASVI+VPP+ A A +E+I+A I IV ITEGIP Sbjct: 60 DKVTDGQVEVPVFGTVAEAREATGANASVIFVPPAFAKGAALEAIDAGIETIVLITEGIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D V R + RLIGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VQDSTIVVERALAAGVRLIGPNCPGIISPGQANLGITPADITGPGRLGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ G +T +GIGGDPV GT ID L F AD T+ ++M+GEIGG AEE AA + Sbjct: 180 MYELRD--FGFTTCLGIGGDPVVGTTHIDALAAFEADPDTDLVIMIGEIGGDAEERAAAW 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +++ KP+V ++AG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IQENM----TKPVVAYIAGFTAPEGKTMGHAGAIVSGSSGTAAAKAEALEAVGVRVGRTP 293 Query: 287 ARIGRSLVELLGS 299 ++ + E+L Sbjct: 294 SQTAQIAREILSR 306 >gi|41406995|ref|NP_959831.1| succinyl-CoA synthetase subunit alpha [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395346|gb|AAS03214.1| SucD [Mycobacterium avium subsp. paratuberculosis K-10] Length = 300 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 150/307 (48%), Positives = 202/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQVVGG++ +K T + G +V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHTA-LMLKAGTQVVGGVNARKAGTTVSHVDPVGKDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV+EA + T AN SV++VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGTVSEAMKETGANVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +R+IGPNCPGI+TP GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 YNVDKGQKTRIIGPNCPGIITPGEALAGITPANISGPGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G ST++GIGGDP+ GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTSIGIGGDPIIGTTHIDAIEAFEKDPDTKIIVMIGEIGGDAEERAADYIKANVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILQSL 300 >gi|299133559|ref|ZP_07026753.1| succinyl-CoA synthetase, alpha subunit [Afipia sp. 1NLS2] gi|298591395|gb|EFI51596.1| succinyl-CoA synthetase, alpha subunit [Afipia sp. 1NLS2] Length = 293 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 154/297 (51%), Positives = 205/297 (69%), Gaps = 8/297 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ILVDK+TKVL QG+TG AGT HT + + Y T VV G+ P KG ++N+PV+ Sbjct: 1 MAILVDKDTKVLCQGMTGWAGTHHTARMMEY-GTTVVAGVTPGKGGR----SHLNLPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+AK T ANAS+I+VPP+ A A+IE+IEAEIPLIV +TE +P LDMVRV+ L S Sbjct: 56 TVAKAKAETEANASMIFVPPANAAAAMIEAIEAEIPLIVAVTERVPALDMVRVRQALNGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPN GIL P+ C IG+M R G+VGI+SRS +LT E V Q S EGLGQST Sbjct: 116 KTRLIGPNSQGILAPEICMIGVMATGSERPGNVGIVSRSASLTSEVVAQISSEGLGQSTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGDP+ G + +ELFL D T+ IV++GEIGG+ E+E A++L+ R KP+V Sbjct: 176 VGVGGDPIHGMSMLQCVELFLEDPETKGIVLIGEIGGTEEQEVAEYLQ---GRKVAKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +AG+ APP R MGH+G + G+G A KI A++ AG+ +APS +G ++ + L Sbjct: 233 ALIAGQYAPPERRMGHSGTLTMYGRGDANSKIAALERAGVQVAPSSHLVGATIRQAL 289 >gi|227498129|ref|ZP_03928302.1| succinate--CoA ligase (ADP-forming) [Actinomyces urogenitalis DSM 15434] gi|226832465|gb|EEH64848.1| succinate--CoA ligase (ADP-forming) [Actinomyces urogenitalis DSM 15434] Length = 307 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 138/314 (43%), Positives = 192/314 (61%), Gaps = 21/314 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW----------- 49 MSI +D++ +V+VQG+TG G HT + +L TQVV G++P+K T Sbjct: 1 MSIFLDESDRVIVQGMTGSEGRKHTRR-MLCAGTQVVAGVNPRKAGTTVVFDVEPIGPGA 59 Query: 50 ---TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G V VPV+ TVAEA+E T A SV++VPP+ A A+IE+++A + L+V ITEGIP Sbjct: 60 GTGEAGEVEVPVYGTVAEAREATGATVSVVFVPPAFAKGAVIEAVDAGMRLVVVITEGIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D ++ ++IGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VADATYFRSYAASKGVQIIGPNCPGIISPARSNVGITPPDITGPGPIGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + LG +T +GIGGDPV GT ID L F AD T+ +VM+GEIGG AEE AA + Sbjct: 180 MHELRD--LGFTTCIGIGGDPVVGTTHIDALAGFEADPDTKLVVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +KD KP+V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IKDNM----TKPVVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGRTP 293 Query: 287 ARIGRSLVELLGSL 300 EL +L Sbjct: 294 TETADIARELYRAL 307 >gi|311234280|gb|ADP87134.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio vulgaris RCH1] Length = 691 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 126/294 (42%), Positives = 190/294 (64%), Gaps = 8/294 (2%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + K +VLVQG+TG++ HT + Y T +V G+ P KG G VPV+ +V E Sbjct: 406 LGKGARVLVQGITGRSAQLHTRLMLDY-GTNIVAGVTPFKGGQVTQG----VPVYDSVHE 460 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 A + +A++++VP + A D+++E++ IP VCITEGIP DM+R + +R+ Sbjct: 461 ACRQHDIDATILFVPAAFAADSLLEAVAEGIPWAVCITEGIPQKDMLRALRVARGARTRI 520 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPN PGI+ P +CK+GIMPG++F G + + SRSGTLTYEA + S G+GQS G+G Sbjct: 521 IGPNTPGIIVPGACKVGIMPGNVFSPGPLAVFSRSGTLTYEAAARLSAAGIGQSLCAGVG 580 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 GDP G++F+ + EL DEAT+ ++++GE+GG+AEEE A ++++ KP+V FVA Sbjct: 581 GDPYIGSDFVSLCELVRDDEATQGVLVLGEVGGTAEEELAAWVRE---TAFPKPVVSFVA 637 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G+TAPPGR +GHAGA++ GG K+ A+ +AGI + P + ++ + LG Sbjct: 638 GRTAPPGRRLGHAGAILDEADGGIAGKVRALCDAGIAVCPDLGSLPAAVRQALG 691 >gi|301057856|ref|ZP_07198924.1| succinate-CoA ligase, alpha subunit [delta proteobacterium NaphS2] gi|300448052|gb|EFK11749.1| succinate-CoA ligase, alpha subunit [delta proteobacterium NaphS2] Length = 293 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 139/299 (46%), Positives = 194/299 (64%), Gaps = 8/299 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T++LVQG+TG G F+T I Y T VV G+ P KG + W VPVF Sbjct: 1 MSILIDEGTRLLVQGITGSEGGFYTHGCIEY-GTNVVAGVTPGKGGSLWAEK---VPVFN 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A T ANAS+I+VP + A DA E+ A + I+ ITE IP LDM RV+ +++ Sbjct: 57 TVENAVRETGANASIIFVPAAFAADAAFEAAYAGLSPIILITEFIPTLDMARVRNFVKEK 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG+++P CK GIM F G VG++SRSGTLTYE +++ +GQST Sbjct: 117 GVYLIGPNCPGVISPGKCKAGIMIPQAFMPGRVGVISRSGTLTYEVAAMLTEKEIGQSTC 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+GGD + GT +VL LF D T+++V++GEIGG E+ AA+F+++ KP+V Sbjct: 177 VGVGGDQIPGTTMAEVLALFEKDAETDAVVLIGEIGGGFEQTAAEFIRE----KMSKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPPGR MGHAGA+++G +G AE+K A+ +AG + +P + + ++L S Sbjct: 233 AFIAGSTAPPGRRMGHAGAIVTGKEGRAEEKKKALADAGATVVDTPPELSDMIKKVLNS 291 >gi|307354404|ref|YP_003895455.1| succinyl-CoA synthetase subunit alpha [Methanoplanus petrolearius DSM 11571] gi|307157637|gb|ADN37017.1| succinyl-CoA synthetase, alpha subunit [Methanoplanus petrolearius DSM 11571] Length = 288 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 132/299 (44%), Positives = 186/299 (62%), Gaps = 16/299 (5%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQT----QVVGGIHPKKGSTYWTGGNVNVPV 58 I DKNT V+VQG TG+ G FH E Y ++ VV G+ P +G G VPV Sbjct: 2 IYGDKNTGVIVQGATGRQGAFHIELMNKYAESVGGKGVVAGVTPGRGGQDVHG----VPV 57 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EA A+ SV++VP AGD+I+E+ + L+V ITE IPV D ++ + Sbjct: 58 YNSVREALLEHDASVSVLFVPGFAAGDSIMEAAYNGLDLVVAITEHIPVHDTIKAISYAG 117 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPG ++P K+GIMP + +G+VG++SRSGTLTYE V + S+ G+GQS Sbjct: 118 LEGCSVIGPNCPGTMSPGELKLGIMPAQLAMRGNVGVISRSGTLTYEVVNELSRAGIGQS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV G F+DVLE F D T+++V++GE+GG+ EEE A + P Sbjct: 178 TIVGIGGDPVIGETFVDVLERFENDPETKAVVLIGEVGGNLEEEGASY--------TDLP 229 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +V ++AG +APP + MGHAGA+++GG+G A KI ++ GI +A P+ I + ELL Sbjct: 230 LVTYIAGVSAPPEKRMGHAGAIVAGGEGDAGSKIRRLESMGITVAEKPSDIPVLIRELL 288 >gi|46580542|ref|YP_011350.1| succinyl-CoA synthase, beta/subunit alphas [Desulfovibrio vulgaris str. Hildenborough] gi|46449961|gb|AAS96610.1| succinyl-CoA synthase, beta/alpha subunits [Desulfovibrio vulgaris str. Hildenborough] Length = 709 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 126/294 (42%), Positives = 190/294 (64%), Gaps = 8/294 (2%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + K +VLVQG+TG++ HT + Y T +V G+ P KG G VPV+ +V E Sbjct: 424 LGKGARVLVQGITGRSAQLHTRLMLDY-GTNIVAGVTPFKGGQVTQG----VPVYDSVHE 478 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 A + +A++++VP + A D+++E++ IP VCITEGIP DM+R + +R+ Sbjct: 479 ACRQHDIDATILFVPAAFAADSLLEAVAEGIPWAVCITEGIPQKDMLRALRVARGARTRI 538 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPN PGI+ P +CK+GIMPG++F G + + SRSGTLTYEA + S G+GQS G+G Sbjct: 539 IGPNTPGIIVPGACKVGIMPGNVFSPGPLAVFSRSGTLTYEAAARLSAAGIGQSLCAGVG 598 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 GDP G++F+ + EL DEAT+ ++++GE+GG+AEEE A ++++ KP+V FVA Sbjct: 599 GDPYIGSDFVSLCELVRDDEATQGVLVLGEVGGTAEEELAAWVRE---TAFPKPVVSFVA 655 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G+TAPPGR +GHAGA++ GG K+ A+ +AGI + P + ++ + LG Sbjct: 656 GRTAPPGRRLGHAGAILDEADGGIAGKVRALCDAGIAVCPDLGSLPAAVRQALG 709 >gi|183984519|ref|YP_001852810.1| succinyl-CoA synthetase (alpha chain) SucD [Mycobacterium marinum M] gi|183177845|gb|ACC42955.1| succinyl-CoA synthetase (alpha chain) SucD [Mycobacterium marinum M] Length = 300 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 148/307 (48%), Positives = 200/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI ++K+ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 1 MSIFLNKDNKVIVQGITGSEATVHTAR-MLKAGTQIVGGVNARKAGTTVTHEDKGGRVIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF VAEA E+T A+ S+I+VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGGVAEAMEKTGADVSIIFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +R+IGPNCPGI+TP +GI P +I G VG++S+SGTLTY+ +F+ Sbjct: 120 YNLGKGGKTRIIGPNCPGIITPGQALVGITPANITGAGPVGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G +T++GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -FGFTTSIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKANVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVQVGKTPSETAMLA 293 Query: 294 VELLGSL 300 E+L L Sbjct: 294 REILKGL 300 >gi|254773955|ref|ZP_05215471.1| succinyl-CoA synthetase subunit alpha [Mycobacterium avium subsp. avium ATCC 25291] Length = 300 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 150/307 (48%), Positives = 202/307 (65%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT-----GGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQVVGG++ +K T + G +V Sbjct: 1 MSIFLNKDSKVIVQGITGGEGTKHTA-LMLKAGTQVVGGVNARKAGTTVSHVDPVGKDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV+EA + T AN SV++VPP A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGTVSEAMKETGANVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +R+IGPNCPGI+TP GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 YNVDKGQKARIIGPNCPGIITPGEALAGITPANISGPGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G ST++GIGGDP+ GT ID +E F D T+ IVM+GEIGG AEE AA ++K Sbjct: 179 -FGFSTSIGIGGDPIIGTTHIDAIEAFEKDPDTKIIVMIGEIGGDAEERAADYIKANVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALA 293 Query: 294 VELLGSL 300 E+L SL Sbjct: 294 REILQSL 300 >gi|111220618|ref|YP_711412.1| succinyl-CoA synthetase subunit alpha [Frankia alni ACN14a] gi|111148150|emb|CAJ59819.1| succinyl-CoA synthetase, alpha subunit, NAD(P)-binding [Frankia alni ACN14a] Length = 290 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 141/301 (46%), Positives = 199/301 (66%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +D+N++++VQG+TG GT HT++ +L T VV G++P+K G VPVF Sbjct: 1 MAIWLDENSRIVVQGITGSEGTKHTKR-MLAAGTNVVAGVNPRKVGQQVEG----VPVFG 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VA+A E+ AN SVI+VPP DA IE+I+A IPL V ITEG+PV D A + Sbjct: 56 SVADAIEQAGANVSVIFVPPKFTKDAAIEAIDAAIPLAVVITEGVPVHDTTEFWAYGQSK 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + R+IGPNCPGI +P GI+P I G +G++S+SGTLTY+ +++ + G ST Sbjct: 116 GTTRIIGPNCPGIASPGLSNAGIIPADITPGGRIGLVSKSGTLTYQMMYELRE--FGFST 173 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPV GT ID L+ F AD T++IVM+GEIGG AEE AA ++ KP+ Sbjct: 174 CVGIGGDPVIGTTHIDALDAFQADPGTDAIVMIGEIGGDAEERAAAHIEAHV----TKPV 229 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG+VAG TAP G+TMGHAGA++SG G A+ K A+++AG+ + +P+ R + +++ S Sbjct: 230 VGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEKAGVRVGKTPSETARLMADIMRS 289 Query: 300 L 300 L Sbjct: 290 L 290 >gi|300932902|ref|ZP_07148158.1| succinyl-CoA synthetase subunit alpha [Corynebacterium resistens DSM 45100] Length = 295 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 140/299 (46%), Positives = 202/299 (67%), Gaps = 10/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 M+I V+ ++K++VQG+TG G HT Q +L + +VGG++PKK T G +VPVF Sbjct: 1 MAIFVNSDSKIIVQGMTGSEGRKHT-QRMLNSGSNIVGGVNPKKAGTSVEFEGGKSVPVF 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VA+A + T AN SV++VP + A++E+IEAEIPL+VCITEG+PV D AR + Sbjct: 60 GSVADAVKETGANVSVVFVPAAFTKSAMVEAIEAEIPLVVCITEGVPVKDTAEFFARARQ 119 Query: 120 SS-SRLIGPNCPGILTPDSCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 S +R+IGPNCPGI++P+ +GI+P KG +G++S+SGTLTY+ +++ LG Sbjct: 120 SGKTRIIGPNCPGIISPEQTNVGIIPAETAPNKGRIGLVSKSGTLTYQMMYELRD--LGF 177 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 STA+GIGGDP+ GT I+ +E F D T++I+M+GEIGG AEE AA+++ D K Sbjct: 178 STAIGIGGDPIIGTTHINAIEAFQEDPDTDAIIMIGEIGGDAEEFAAEYINDNV----TK 233 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 P+V ++AG TAP G+TMGHAGA++SGG G AE K A++ AG+ + +P L E Sbjct: 234 PVVAYIAGFTAPEGKTMGHAGAIVSGGSGTAEGKKEALEAAGVKVGKTPTEAANLLREA 292 >gi|296816593|ref|XP_002848633.1| succinyl-CoA ligase alpha-chain [Arthroderma otae CBS 113480] gi|238839086|gb|EEQ28748.1| succinyl-CoA ligase alpha-chain [Arthroderma otae CBS 113480] Length = 664 Score = 258 bits (658), Expect = 9e-67, Method: Composition-based stats. Identities = 128/300 (42%), Positives = 191/300 (63%), Gaps = 9/300 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +T+VL QG TGK T + ++++ + T++VGG+ P G ++ +P+F + Sbjct: 40 NLKIGSHTRVLFQGFTGKQATANVKESLAW-GTKIVGGVKPG-----VEGEHLGLPIFPS 93 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A+E T +AS +YVP + AI E++EAEIPLIV + E +P+ DM+R+ + L+ +S Sbjct: 94 VRVAQETTRPDASAVYVPGNQTAKAIEEALEAEIPLIVAVAEHVPIHDMLRIHSMLKTQS 153 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SRL+GPNCPGI++ C+IG P F G+VGI+++SGTL YE V T++ GLGQS Sbjct: 154 KSRLVGPNCPGIISAIGKCRIGFQPLPCFAPGNVGIVAKSGTLGYETVASTTRAGLGQSL 213 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKP 238 +G+GGD + GT+F+D L +F D+ T I++VGEIGG AE EAA+++ R KP Sbjct: 214 CIGMGGDVLAGTDFVDALRVFEHDDDTHGIIIVGEIGGEAEMEAAEWITRYRSRNAEAKP 273 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I+ V G APPGR MGHAGA G+ A KI A++ AG+ + P + G + LL Sbjct: 274 IMALVGGIEAPPGRVMGHAGAWTGAGEPDARTKIRALQSAGVVMVDHPEKFGEGMKTLLA 333 >gi|7272371|gb|AAA27504.2| succinyl-CoA synthetase alpha-subunit [Thermus aquaticus] Length = 288 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 154/296 (52%), Positives = 199/296 (67%), Gaps = 9/296 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ILV++ T+VLVQG+TG+ G FHT+Q + Y T++V G+ P KG T G VPV+ TV Sbjct: 2 ILVNRETRVLVQGITGREGQFHTKQMLDY-GTKIVAGVTPGKGGTEVLG----VPVYDTV 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA +AS+I+VP A DA +E+ A IPLIV ITEGIP LDMVR ++ S Sbjct: 57 KEAVAHHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIG NCPGI++ KIGIMPG +F++G VGI+SRSGTL +EA SQ GLG +T VG Sbjct: 117 RLIGGNCPGIISAHLPKIGIMPGHVFKRGRVGIISRSGTLRHEAAAALSQAGLGTTTTVG 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGDPV+ F D+L LF D TE++V++GEIGGS EEEAA ++KD KKP+VGF Sbjct: 177 IGGDPVRRLTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKDHM----KKPVVGF 232 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + G++AP G+ MGHAGA+I G G E K+ A EAGI +A + I + + LG Sbjct: 233 IGGRSAPKGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADTIDEIVELVKKALG 288 >gi|269218839|ref|ZP_06162693.1| succinyl-CoA synthetase subunit alpha [Actinomyces sp. oral taxon 848 str. F0332] gi|269211950|gb|EEZ78290.1| succinyl-CoA synthetase subunit alpha [Actinomyces sp. oral taxon 848 str. F0332] Length = 306 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 142/312 (45%), Positives = 197/312 (63%), Gaps = 21/312 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGS-------------- 46 MSI +D+N+KV+VQG+TG G HT + +L T VVGG++P+K Sbjct: 1 MSIFLDRNSKVIVQGMTGSEGRKHTRR-MLGAGTNVVGGVNPRKAGASVEFDVAPIGPGA 59 Query: 47 TYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G V+VPVF +VAEAKE T AN SV++VPP+ A+IE+++A + L+V ITEG+P Sbjct: 60 EEREAGAVSVPVFGSVAEAKEATGANVSVVFVPPAHTLGAVIEAVDAGLDLVVVITEGVP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D A + RLIGPNCPGI++P +GI P I G VG++S+SGTLTY+ Sbjct: 120 VKDATEFYAYAAERGVRLIGPNCPGIISPGQSNVGITPPDITGPGRVGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ + LG +T +GIGGDPV GT ID ++ F AD TE IVM+GEIGG AEE AA + Sbjct: 180 MYELAD--LGFTTCIGIGGDPVIGTTHIDAIKAFEADPDTELIVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 + + KP+V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 ISEHV----TKPVVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTP 293 Query: 287 ARIGRSLVELLG 298 ++ E+LG Sbjct: 294 SQTAAIAREILG 305 >gi|120602142|ref|YP_966542.1| succinyl-CoA synthetase, subunit alpha [Desulfovibrio vulgaris DP4] gi|120562371|gb|ABM28115.1| succinyl-CoA synthetase (ADP-forming) beta subunit / succinyl-CoA synthetase (ADP-forming) alpha subunit [Desulfovibrio vulgaris DP4] Length = 691 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 125/293 (42%), Positives = 189/293 (64%), Gaps = 8/293 (2%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + K +VLVQG+TG++ HT + Y T +V G+ P KG G VPV+ +V E Sbjct: 406 LGKGARVLVQGITGRSAQLHTRLMLDY-GTNIVAGVTPFKGGQVTQG----VPVYDSVHE 460 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 A + +A++++VP + A D+++E++ IP VCITEGIP DM+R + +R+ Sbjct: 461 ACRQHDIDATILFVPAAFAADSLLEAVAEGIPWAVCITEGIPQKDMLRALRVARGARTRI 520 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPN PGI+ P +CK+GIMPG++F G + + SRSGTLTYEA + S G+GQS G+G Sbjct: 521 IGPNTPGIIVPGACKVGIMPGNVFSPGPLAVFSRSGTLTYEAAARLSAAGIGQSLCAGVG 580 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 GDP G++F+ + EL DEAT+ ++++GE+GG+AEEE A ++++ KP+V FVA Sbjct: 581 GDPYIGSDFVSLCELVRDDEATQGVLVLGEVGGTAEEELAAWVRE---TAFPKPVVSFVA 637 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G+TAPPGR +GHAGA++ GG K+ A+ +AGI + P + ++ + L Sbjct: 638 GRTAPPGRRLGHAGAILDEADGGIAGKVRALCDAGIAVCPDLGSLPAAVRQAL 690 >gi|25029005|ref|NP_739059.1| succinyl-CoA synthetase subunit alpha [Corynebacterium efficiens YS-314] gi|259506006|ref|ZP_05748908.1| succinyl-CoA synthetase subunit alpha [Corynebacterium efficiens YS-314] gi|23494292|dbj|BAC19259.1| putative succinyl-CoA synthetase alpha subunit [Corynebacterium efficiens YS-314] gi|259166487|gb|EEW51041.1| succinyl-CoA synthetase subunit alpha [Corynebacterium efficiens YS-314] Length = 294 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 139/300 (46%), Positives = 202/300 (67%), Gaps = 8/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +D +++++QG+TG G+ HT + +L VVGG +P+K T G+ +PVF Sbjct: 1 MAIFLDDTSRIIIQGITGSEGSLHTSR-MLASGATVVGGTNPRKAGETVTLGDTELPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E T AN SV++VPP+ AG+A+ E+I+A IPL+V ITEGIPV D+ A ++ Sbjct: 60 TVAEAMEATEANVSVVFVPPAFAGEAMREAIDARIPLLVVITEGIPVRDVAEAWAHAQQV 119 Query: 121 S-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +R+IGPNCPGI+TP GI+P +I G +G++S+SGTLTY+ + + + G+ ST Sbjct: 120 GSTRIIGPNCPGIITPGVSLAGIIPATITGSGPIGLISKSGTLTYQMMNELADVGI--ST 177 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDP+ GT ID L F D TE+IVM+GEIGG AEE AA+F++D KP+ Sbjct: 178 AIGIGGDPIIGTTHIDALRAFEDDPDTEAIVMIGEIGGDAEERAAEFIRDHVS----KPV 233 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG+VAG TAP G+TMGHAGA+++G G A+ K A++ G+ + +P+ + E++ Sbjct: 234 VGYVAGFTAPEGKTMGHAGAIVTGSVGTAQAKKEALEAVGVRVGTTPSEAAEIMKEIIAD 293 >gi|284030087|ref|YP_003380018.1| succinyl-CoA synthetase subunit alpha [Kribbella flavida DSM 17836] gi|283809380|gb|ADB31219.1| succinyl-CoA synthetase, alpha subunit [Kribbella flavida DSM 17836] Length = 297 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 124/300 (41%), Positives = 188/300 (62%), Gaps = 7/300 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + + +KV+VQG+TG G HT + +L T +VGG+ P KG ++PV+ Sbjct: 1 MAIFLTEQSKVIVQGMTGAEGQKHTSR-MLAAGTNIVGGVTPGKGGQSVDFAKRSIPVYG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 + A+A T A+ SV++VPP A+IE+++A + L+V ITEG+PV D A + + Sbjct: 60 SCADAVRSTGADVSVVFVPPRFVKGAVIEAVDAGLSLVVVITEGVPVHDTAAFFAHAQAA 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +R+IGPN PG+++P GI+P I G +G++S+SGTLTY+ +++ + G +TA Sbjct: 120 GTRIIGPNSPGLISPGRANAGIIPADIAGPGRIGLVSKSGTLTYQMMYELRE--YGFTTA 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP+ GT ID L F D T++IVM+GEIGG AEE AA F+ + KP+V Sbjct: 178 IGIGGDPIIGTTHIDALRAFQDDPETDAIVMIGEIGGDAEERAAAFIAEYV----TKPVV 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 G+VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P+ + + L + Sbjct: 234 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAVGVKVGKTPSETAQLMRAALAQI 293 >gi|219852540|ref|YP_002466972.1| succinyl-CoA synthetase, alpha subunit [Methanosphaerula palustris E1-9c] gi|219546799|gb|ACL17249.1| succinyl-CoA synthetase, alpha subunit [Methanosphaerula palustris E1-9c] Length = 288 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 131/299 (43%), Positives = 183/299 (61%), Gaps = 16/299 (5%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQT----QVVGGIHPKKGSTYWTGGNVNVPV 58 I DK+ V+VQG TGK G FH Y ++ VV G+ P +G G VPV Sbjct: 2 IYGDKSLGVIVQGATGKQGAFHINLMNEYARSVGGRGVVAGVTPGRGGQEVHG----VPV 57 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EA A ASV++VP AGD+I+E+ A + L+V ITE IPV D ++ A + Sbjct: 58 YNSVHEALAEHDATASVLFVPGKAAGDSIMEAASAGLELVVAITEHIPVHDTMKAVAYAK 117 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPG+L+P K+GIMP +F +G VG++SRSGTLTYE V + ++ G+GQS Sbjct: 118 LHDCAVIGPNCPGLLSPGEVKLGIMPAHLFTRGHVGVISRSGTLTYEIVDELTRAGIGQS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDPV G F+D+L+ F D T ++V+VGE+GG+ E+E A P Sbjct: 178 TVVGIGGDPVIGQTFVDLLDRFEEDPETRAVVLVGEVGGALEQEGAA--------STDLP 229 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 IV ++AG +APP + MGHAGA++ GG+G A KI ++ G+ +A P+ I + LL Sbjct: 230 IVAYIAGVSAPPDKRMGHAGAIVEGGEGDAGSKIRHLQNQGVTVAQRPSEIPCLIRNLL 288 >gi|86739365|ref|YP_479765.1| succinyl-CoA synthetase subunit alpha [Frankia sp. CcI3] gi|86566227|gb|ABD10036.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Frankia sp. CcI3] Length = 290 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 140/301 (46%), Positives = 201/301 (66%), Gaps = 12/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +D+N++V+VQG+TG G+ HT + +L T VV G++ +K G VPVF Sbjct: 1 MAIWLDENSRVVVQGITGSEGSKHTRR-MLAAGTNVVAGVNARKVGQQVEG----VPVFG 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 +VA+A +T AN SVI+VPP+ DA IE+I+A IPL V ITEG+P+ D A K Sbjct: 56 SVADAMAQTGANVSVIFVPPAFTKDAAIEAIDAAIPLAVVITEGVPIHDTTEFFAYSRSK 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +++R+IGPNCPGI +P GI+P I G +G++S+SGTLTY+ +++ + G ST Sbjct: 116 ATTRIIGPNCPGIASPGLSNAGIIPADITPGGRIGLVSKSGTLTYQMMYELRE--FGFST 173 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGDPV GT ID L+ F AD T++IVM+GEIGG AEE AA +++ KP+ Sbjct: 174 CVGIGGDPVIGTTHIDALDAFQADPNTDAIVMIGEIGGDAEERAAAHIEENV----TKPV 229 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG+VAG TAP G+TMGHAGA++SG G A+ K A+++AG+ + +P+ R + +++ S Sbjct: 230 VGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEKAGVRVGKTPSETARLMADIMRS 289 Query: 300 L 300 L Sbjct: 290 L 290 >gi|291456794|ref|ZP_06596184.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium breve DSM 20213] gi|291382071|gb|EFE89589.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium breve DSM 20213] Length = 303 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 133/305 (43%), Positives = 199/305 (65%), Gaps = 15/305 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNVNV 56 + V+ +T V+VQG+TG G HT + +L T +VGG++P+K T T G +V+V Sbjct: 2 LFVEDSTPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNPRKAGTSVTFPAAKNGTDVDV 60 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF T EA+E T A ASV++VPP A A++E+IEA I LIV ITEGIPV D Sbjct: 61 PVFATCDEAREATGAKASVVFVPPKFAKSAVVEAIEAGIELIVIITEGIPVADSAYFVEL 120 Query: 117 LEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + R+IGPNCPG++T + +GI+P I +G +G++S+SGTLTY+ + + S Sbjct: 121 ALRKGVRIIGPNCPGLITLGNPGVNLGIIPDDIVGRGPLGLVSKSGTLTYQLMGELSD-- 178 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G + +G GGDP+ GT ++ L+ F AD T++++M+GEIGG AE++AA + K+ Sbjct: 179 IGFTACLGAGGDPIVGTTLLEALQAFEADPDTKAVMMIGEIGGFAEQDAAAWAKEHM--- 235 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK NA++ AGI + +P + + + Sbjct: 236 -TKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKNALEAAGIPVGKTPGQAAQIMR 294 Query: 295 ELLGS 299 ++L Sbjct: 295 DVLAK 299 >gi|307249681|ref|ZP_07531663.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858290|gb|EFM90364.1| Succinyl-CoA ligase [ADP-forming] subunit alpha [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 218 Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 140/216 (64%), Positives = 169/216 (78%), Gaps = 5/216 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+DKNTKV+ QG TG GTFH+EQA+ Y T++VGG+ P KG T G +PVF Sbjct: 1 MAILIDKNTKVICQGFTGGQGTFHSEQALAY-GTKLVGGVSPNKGGTTHLG----LPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E+T A ASVIYVP G DAI+E+I+A I LIVCITEGIP LDM+ VK +L++S Sbjct: 56 TVREAVEKTGATASVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPTLDMICVKQKLKES 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPGI+TPD CKIGIMP I +KG +GI+SRSGTLTYEAV QT+ EG GQST Sbjct: 116 GVRMIGPNCPGIITPDECKIGIMPAHIHKKGKIGIVSRSGTLTYEAVKQTTDEGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIG 216 VGIGGDP+ G+ FID+L+LF AD TE+IVM+GEIG Sbjct: 176 VGIGGDPIPGSSFIDILKLFQADPETEAIVMIGEIG 211 >gi|189205729|ref|XP_001939199.1| succinyl-CoA ligase subunit alpha [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187975292|gb|EDU41918.1| succinyl-CoA ligase subunit alpha [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 720 Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 122/301 (40%), Positives = 191/301 (63%), Gaps = 9/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +T+V+ QG TGK T + +++I + T VVGG+ P +G ++ +PV + Sbjct: 43 NLKIGAHTRVIFQGFTGKQATANAKESIQW-GTNVVGGVKPNG-----SGEHLGLPVLPS 96 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A E+ +A+ IYV A AI E+I+AE+PLIV + E IP+ DM+R+ + L+ +S Sbjct: 97 VRAAMEQLKPDATGIYVAAHQATAAIEEAIKAEVPLIVAVAEHIPLHDMMRIHSMLQSQS 156 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SRLIG N PGI++ C+IG P F G +GI+++SGTL+YE V ++ GLGQS Sbjct: 157 KSRLIGANAPGIISAIGRCRIGFQPLPTFSPGHIGIVAKSGTLSYETVGSLTRAGLGQSL 216 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKP 238 + +GGD + GT F+D L++F D+ TE+I++VGE+GG+ EEEAA ++ + +R + KP Sbjct: 217 CIAVGGDVIAGTNFVDALKVFEHDKDTEAIIVVGELGGTIEEEAADWIINYRRRVKDPKP 276 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I + G AP G+ MGHAGA + G+G AE K A++ AG+ + PA+ G + ++L Sbjct: 277 IAAVIGGFQAPHGKVMGHAGAWVGLGEGTAESKYKALERAGVTMVDHPAKFGGVIKDILA 336 Query: 299 S 299 Sbjct: 337 K 337 >gi|317153396|ref|YP_004121444.1| ATP-grasp domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316943647|gb|ADU62698.1| ATP-grasp domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 692 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 127/289 (43%), Positives = 179/289 (61%), Gaps = 9/289 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 S+ +D++T +LVQG+TG+ G HT Y VV G+ P KG G VPV+ + Sbjct: 405 SLGIDRDTPILVQGITGREGQLHTRLMQAY-GANVVAGVTPFKGGQEILG----VPVYNS 459 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 VA+A AS+I+VPP A DA++E+ EIP +CITEGI +M+ V +++ S Sbjct: 460 VAQAMRHHKIGASIIFVPPRMAADAVLEAACNEIPWTICITEGIAQHEMLAVFEQIKSSP 519 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 ++++GPN PG++ P KIGIMP F G V ILSRSGTLTYE + + +GQS V Sbjct: 520 TQVVGPNTPGVIVPGQTKIGIMPTDPFMPGPVAILSRSGTLTYEVSARLTASNIGQSVCV 579 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP G ++ DV E+ EAT ++V++GEIGG AEE A+++ + G KP+V Sbjct: 580 GIGGDPFIGVKYADVFEMLRNHEATRAVVVLGEIGGQAEENLAEYV---VRTGFDKPVVS 636 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 F+AG+TAPPG+ +GHAGA++ G GG KI M+ AG + S + Sbjct: 637 FIAGRTAPPGKRLGHAGAILEKG-GGVGRKIETMRRAGFTVCSSLEEVA 684 >gi|226356090|ref|YP_002785830.1| succinate--CoA ligase (succinyl-CoA synthetase) subunit alpha [Deinococcus deserti VCD115] gi|226318080|gb|ACO46076.1| putative succinate--CoA ligase (succinyl-CoA synthetase) alpha subunit [Deinococcus deserti VCD115] Length = 301 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 145/310 (46%), Positives = 197/310 (63%), Gaps = 20/310 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M ILVDKN+KV+VQG+TG+ G H+ +A+ TQVV G+ P KG T + G PV+ Sbjct: 1 MGILVDKNSKVIVQGMTGREGASHS-RAMKEFGTQVVAGVTPGKGGTDFEG----WPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 +VAEAKE+ AN S+I+VPP+GA DA++E+ A +PLIV ITEG+P +DM+R + + Sbjct: 56 SVAEAKEKHGANVSIIFVPPAGAADAVLEAAHAGMPLIVLITEGVPTVDMMRAVQEVNQL 115 Query: 120 ---------SSSRLIGPNCPGILTPDSCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQ 169 RLIG NCPG++T K+GIMP I+ G +G++SRSGTLTYEA Sbjct: 116 DAQNRAQGGQGIRLIGGNCPGLVTNGEAKVGIMPNKIYTNPGRIGLISRSGTLTYEAAKL 175 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + GLG ST VGIGGDPV GT F DVL LF AD T++++++GEIGG+ EE AA Sbjct: 176 LNDAGLGTSTTVGIGGDPVIGTTFADVLPLFEADPDTDAVIVIGEIGGADEEAAA----A 231 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KKP+V F++G++AP G+ MGHAGA+I G G E K+ A A + +A + I Sbjct: 232 YIAENMKKPVVAFISGRSAPKGKRMGHAGAIIMGDVGTPESKLAAFAAANVPVADTMPEI 291 Query: 290 GRSLVELLGS 299 + + L Sbjct: 292 IDLVKQALNK 301 >gi|16082319|ref|NP_394787.1| succinyl-CoA synthetase subunit alpha [Thermoplasma acidophilum DSM 1728] gi|10640674|emb|CAC12452.1| probable succinyl-CoA synthetase, alpha subunit [Thermoplasma acidophilum] Length = 294 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 131/293 (44%), Positives = 186/293 (63%), Gaps = 9/293 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 +L++KNTKV+VQG+TG G+FHT + +L T+VV GI P KG T + VP+ +V Sbjct: 11 VLINKNTKVIVQGITGHQGSFHTGE-MLKFGTKVVAGIAPGKGGTKFADK---VPIVNSV 66 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 +EA + +A++I VP DA E+I+ + ++ +TE +P D + + Sbjct: 67 SEAMQY-EPDATMISVPAPYVKDAAYEAIDNGLKIVYILTEHVPYQDTMEIVKEASLRGI 125 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GPN PGI P KIGIMP IF++G V I SRSGTLTYE V+ ++ G+G+ST +G Sbjct: 126 TVLGPNGPGITVPFESKIGIMPNHIFKEGDVAIASRSGTLTYEIVYAVTKAGMGESTVIG 185 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GGD V G FIDVL++F DE T+ IV+VGEIGG+ EE AA ++K K+ V + Sbjct: 186 LGGDRVVGLTFIDVLKMFEKDEKTKRIVLVGEIGGNNEELAADYIKKHVKKKV----VAY 241 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 +AG++APPG+ MGHAGA+I G G AE K+ A EAG+ +A P I + L E Sbjct: 242 IAGRSAPPGKRMGHAGAIIERGVGTAESKLKAFAEAGVKVADYPQDIPKLLEE 294 >gi|183601651|ref|ZP_02963021.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium animalis subsp. lactis HN019] gi|219683815|ref|YP_002470198.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium animalis subsp. lactis AD011] gi|241190851|ref|YP_002968245.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196257|ref|YP_002969812.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183219257|gb|EDT89898.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium animalis subsp. lactis HN019] gi|219621465|gb|ACL29622.1| succinyl-CoA ligase [Bifidobacterium animalis subsp. lactis AD011] gi|240249243|gb|ACS46183.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250811|gb|ACS47750.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178590|gb|ADC85836.1| Succinyl-CoA synthetase alpha chain [Bifidobacterium animalis subsp. lactis BB-12] gi|295793840|gb|ADG33375.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium animalis subsp. lactis V9] Length = 305 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 129/310 (41%), Positives = 197/310 (63%), Gaps = 18/310 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 M++ ++ + V+VQG+TG G HT + +L T +VGG++P+K T + V Sbjct: 1 MNVFIEDDAPVIVQGITGHQGMTHTAR-MLKANTNIVGGVNPRKAGTTLEFEDGNGVPVR 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 VPVF T EAK+ T A ASV++VPP A DA++E++EA ++V ITEGIPV D Sbjct: 60 VPVFATCQEAKDITGAKASVVFVPPRFAKDAVVEAVEAGFEVVVVITEGIPVADSAYFVE 119 Query: 116 RLEKSSSRLIGPNCPGILT------PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 R++GPNCPG+LT +GI+P I +G +G++S+SGTLTY+ + + Sbjct: 120 LALSKGVRIVGPNCPGLLTLPESTDTHGVNLGIIPDGIVSRGPLGLVSKSGTLTYQLMGE 179 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 S +G + +G GGDP+ GT ++ LE F AD T++++M+GEIGG+AE++AAQ+ Sbjct: 180 LSD--IGFTACLGAGGDPIVGTTLLEALEAFEADPNTKAVMMIGEIGGNAEQDAAQW--- 234 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 A + KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK A++ AGI + +P+ Sbjct: 235 -AAKNMTKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKQAALEAAGIRVGRTPSEA 293 Query: 290 GRSLVELLGS 299 + + E+L + Sbjct: 294 AQIMREVLSA 303 >gi|118619788|ref|YP_908120.1| succinyl-CoA synthetase subunit alpha [Mycobacterium ulcerans Agy99] gi|118571898|gb|ABL06649.1| succinyl-CoA synthetase (alpha chain) SucD [Mycobacterium ulcerans Agy99] Length = 300 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 147/307 (47%), Positives = 199/307 (64%), Gaps = 14/307 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI ++K+ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 1 MSIFLNKDNKVIVQGITGSEATVHTAR-MLKAGTQIVGGVNARKAGTTVTHEDKGGRVIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF VAEA E+T A+ S+I+VPP A DAIIE+I+AEIPL+V ITE IPV D A Sbjct: 60 LPVFGGVAEAMEKTGADVSIIFVPPKFAKDAIIEAIDAEIPLLVVITEVIPVQDTAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + +R+IGPNCPGI+TP +GI P +I G VG++S+SGTLTY+ +F+ Sbjct: 120 YNLGKGGKTRIIGPNCPGIITPGQALVGITPANITGAGPVGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G +T++GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -FGFTTSIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKANVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ AG+ + +P+ Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVQVGKTPSETAVLA 293 Query: 294 VELLGSL 300 E+L L Sbjct: 294 REILKGL 300 >gi|126273963|ref|XP_001387359.1| succinate-CoA ligase [Scheffersomyces stipitis CBS 6054] gi|126213229|gb|EAZ63336.1| succinate-CoA ligase [Pichia stipitis CBS 6054] Length = 324 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 169/301 (56%), Positives = 215/301 (71%), Gaps = 8/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ V+ +TKV+ QG TGK TFH EQAI Y TQVVGG +PKK ++ PVF + Sbjct: 25 NLKVNADTKVIYQGFTGKQATFHAEQAIAY-GTQVVGGTNPKKAGQTH----LDRPVFAS 79 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V +A +T A A+ I+VPP A AI E+I AEIPL V ITEGIP DMVRV L+ + Sbjct: 80 VKDAIAQTGATATGIFVPPPIAAAAIEEAIAAEIPLAVAITEGIPQKDMVRVAQILKTQE 139 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI++PD CKIGIMP I ++G VGI+SRSGTLTYEAV QT+ GLGQS Sbjct: 140 KTRLVGPNCPGIISPDQCKIGIMPSHIHQRGRVGIISRSGTLTYEAVAQTTAVGLGQSLV 199 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA--KRGRKKP 238 +G+GGDP GT FID L LFL DE TE I+++GEIGG+AEEEAA+FLK + KP Sbjct: 200 IGMGGDPFPGTNFIDALTLFLRDEETEGIILIGEIGGTAEEEAAEFLKQHNLTRPQGPKP 259 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V F+AG +APPGR MGHAGA++SGGKG A+ KI +++ AG+ + SPAR+G SL+ Sbjct: 260 VVSFIAGVSAPPGRRMGHAGAIVSGGKGDAKSKIASLQSAGVVVEASPARLGNSLLNEFK 319 Query: 299 S 299 + Sbjct: 320 A 320 >gi|121609682|ref|YP_997489.1| succinyl-CoA synthetase subunit alpha [Verminephrobacter eiseniae EF01-2] gi|121554322|gb|ABM58471.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Verminephrobacter eiseniae EF01-2] Length = 298 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 150/306 (49%), Positives = 206/306 (67%), Gaps = 16/306 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ--TQVVGGIHPKKGSTYWTGGNVNVPV 58 MSI ++++TKV+ QG+TGK G FHTE+ Y + V G++P+K G +P+ Sbjct: 1 MSIYINQDTKVITQGITGKTGQFHTEKCQAYANGKSAFVAGVNPRKAGESIFG----IPI 56 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V EA +T A SVIYVPP+ A AI E++EA++ L +CITEGIPV DM+ V+ R+ Sbjct: 57 YASVGEAATQTGATVSVIYVPPAAAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNRMR 116 Query: 119 ------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + L+GPNCPG++TP+ KIGIMPG I RKG +G++SRSGTLTYEAV ++ Sbjct: 117 AKEAAGGKKTLLLGPNCPGLITPEEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAMLTE 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQSTAVGIGGDP+ G + IDV++ F D T+++VM+GEIGG E AA++ K Sbjct: 177 VGLGQSTAVGIGGDPINGLKHIDVMQAFNDDPGTDAVVMIGEIGGPDEAIAARWCKTHM- 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KP+VGF+AG TAPPG+ MGHAGA+IS G AE K+ M+E+G + +P+ +GR Sbjct: 236 ---TKPVVGFIAGVTAPPGKRMGHAGALISDGADTAEAKLAIMQESGFVVTRNPSELGRL 292 Query: 293 LVELLG 298 L L Sbjct: 293 LKAQLK 298 >gi|293977872|ref|YP_003543302.1| succinyl-CoA synthetase subunit alpha [Candidatus Sulcia muelleri DMIN] gi|292667803|gb|ADE35438.1| succinyl-CoA synthetase, alpha subunit [Candidatus Sulcia muelleri DMIN] Length = 294 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 153/298 (51%), Positives = 206/298 (69%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K +K++VQG TGK G+FH+++ I Y T ++GG+ P KG G P+F Sbjct: 1 MSILVNKFSKIIVQGFTGKEGSFHSQKMISY-GTPIMGGVTPGKGGKIHLGK----PIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++ AN S+++VPP A DAIIESI + I +I+CITEGIP+ DM+++K + K Sbjct: 56 TVEEAVKKLNANISILFVPPMFAYDAIIESIYSGIKIIICITEGIPISDMLKIKNIINKK 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + LIGPNCPGI+TP+ K+GIMPG IF+KG VGI+S+SGTLTYEA Q + G G ST Sbjct: 116 KNCILIGPNCPGIITPNEAKVGIMPGFIFKKGRVGIVSKSGTLTYEAANQVVKSGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDP+ GT ++ F D T+ IVM+GEIGG E AA K + +KKP+ Sbjct: 176 AVGIGGDPIIGTSMKSIISEFFNDSETDIIVMIGEIGGKLEINAA---KWIKNQKKKKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +GF+AG+TAP GRTMGHAGA++ A KIN +K+ GI I SP++IG + ++L Sbjct: 233 LGFIAGQTAPKGRTMGHAGAIVGEKNDTAIYKINMLKKCGIKIIKSPSQIGDEVFKIL 290 >gi|285808573|gb|ADC36094.1| succinyl-CoA synthetase alpha subunit [uncultured bacterium 164] Length = 271 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 159/272 (58%), Positives = 204/272 (75%), Gaps = 9/272 (3%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 + T +VGG+ P KG T G VPVF TV +A TAANASV+YVPP+ A DAI+ Sbjct: 4 MRDYGTNIVGGVTPGKGGTTHEG----VPVFNTVGDAVRDTAANASVVYVPPAFAADAIM 59 Query: 89 ESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSRLIGPNCPGILTPDSCKIGIMPGSI 147 E+ +A +PLIV ITEGIPV DMV+V L ++ ++R+IGPNCPGI++P CKIGIMPG I Sbjct: 60 EAADAALPLIVAITEGIPVADMVKVNEYLGDRPATRMIGPNCPGIISPGKCKIGIMPGHI 119 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 ++G +G++SRSGTLTYEAV Q + GLGQSTA+GIGGDP+ GT D L LF AD+ T+ Sbjct: 120 HKEGRIGVVSRSGTLTYEAVGQLTALGLGQSTAIGIGGDPIIGTTHTDALRLFQADDETD 179 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 +IVM+GEIGG+AEE+AA F KD KPIV F+AG+TAPPGR MGHAGA+ISGGKG Sbjct: 180 AIVMIGEIGGTAEEDAAAFAKDNV----TKPIVAFIAGQTAPPGRRMGHAGAIISGGKGT 235 Query: 268 AEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 A +K+ A+++AGI + SPA IG ++ E+LG+ Sbjct: 236 AAEKMAALRDAGIHVVESPADIGAAVQEVLGA 267 >gi|326479223|gb|EGE03233.1| succinyl-CoA synthetase subunit alpha [Trichophyton equinum CBS 127.97] Length = 683 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 125/297 (42%), Positives = 191/297 (64%), Gaps = 10/297 (3%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + +T+VL QG T T + ++++ + T++VGG+ P G ++ +P+F +V Sbjct: 52 IGSHTRVLFQGFTA-QATANVKESLAW-GTKIVGGVKPG-----IAGEHLGLPIFPSVRV 104 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSR 123 A+E++ +AS +YVP S AI E++EAEIPLIV + E +P+ DM+R+ + L+ +S SR Sbjct: 105 AQEKSKPDASAVYVPGSQTAKAIEEALEAEIPLIVAVAEHVPIHDMLRIHSMLKTQSKSR 164 Query: 124 LIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 L+GPNCPGI++ C+IG P F G++GI+++SGTL YE V T++ GLGQS +G Sbjct: 165 LVGPNCPGIISAIGKCRIGFQPLPCFAPGNIGIVAKSGTLGYETVASTTRAGLGQSLCIG 224 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPIVG 241 +GGD + GT+F+D L++F D+ T I+MVGEIGG AE EAA+++K +R KPI+ Sbjct: 225 MGGDVLAGTDFVDALKVFEHDDDTHGIIMVGEIGGEAEMEAAEWIKRYRRRTSEAKPIMA 284 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + G AP GR MGHAGA + G+ A KI A++ AG+ + P + G + LL Sbjct: 285 LIGGIEAPHGRVMGHAGAWTATGEPDARTKIQALQSAGVVMVDHPEKFGEGMKVLLA 341 >gi|294101519|ref|YP_003553377.1| succinyl-CoA synthetase, alpha subunit [Aminobacterium colombiense DSM 12261] gi|293616499|gb|ADE56653.1| succinyl-CoA synthetase, alpha subunit [Aminobacterium colombiense DSM 12261] Length = 288 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 118/296 (39%), Positives = 191/296 (64%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++ +TKVLVQG+TG++G T+ I Y T++V G+ P KG ++PVF Sbjct: 1 MSILINADTKVLVQGITGRSGALQTQTLIEY-GTRIVAGVTPGKGGMIVH----DIPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 V+EA R A+A++ +VPP+ A DA E I++ IPL+V EGIP D++ + + Sbjct: 56 FVSEAVSRYGADAAISFVPPALAKDAAFEIIDSAIPLLVLTMEGIPQKDVLAIISYASAH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++R+IGP G++ P CK+G P +F++G VG++S+SG L+YE ++ G+GQST Sbjct: 116 NTRIIGPGAAGLIAPGKCKLGAHPARMFKEGHVGVVSKSGALSYEMGKTLTEAGIGQSTV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 V +GG P+ GT +++ELF D TE I+++GEIGG+ E +AA+++ + KP+V Sbjct: 176 VALGGGPIWGTTQKEIVELFEKDPETEIILLLGEIGGATEIKAAEYIAEHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + G++AP G+++GHAGA+I G KG A K+ A+ ++G+ +A +P + + +L Sbjct: 232 SLIVGRSAPEGKSLGHAGAIIRGNKGTAASKMKALAKSGVYVAQNPREVIEIIRKL 287 >gi|315049905|ref|XP_003174327.1| succinyl-CoA ligase subunit alpha [Arthroderma gypseum CBS 118893] gi|311342294|gb|EFR01497.1| succinyl-CoA ligase subunit alpha [Arthroderma gypseum CBS 118893] Length = 687 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 125/300 (41%), Positives = 193/300 (64%), Gaps = 9/300 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +T+VL QG TGK T + ++++ + T++VGG+ P G ++ +P+F + Sbjct: 49 TLKIGSHTRVLFQGFTGKQATANVKESLAW-GTKIVGGVKPG-----VEGEHLGLPIFPS 102 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A E+ +AS +YVP + AI E++EAEIPLIV + E +P+ DM+R+ + L+ +S Sbjct: 103 VRVAHEKAKPDASAVYVPGNQTAKAIEEALEAEIPLIVAVAEHVPIHDMLRIHSMLKTQS 162 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SRL+GPNCPGI++ C+IG P F G++GI+++SGTL YE V T++ GLGQS Sbjct: 163 KSRLVGPNCPGIISAIGKCRIGFQPLPCFAPGNIGIVAKSGTLGYETVASTTRAGLGQSL 222 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKP 238 +G+GGD + GT+F+D L++F D+ T I++VGEIGG AE EAA++++ +R KP Sbjct: 223 CIGMGGDVLAGTDFVDALKVFEHDDDTHGIIIVGEIGGEAEMEAAEWIEGYRRRTAAAKP 282 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I+ V G AP GR MGHAGA + G+ A KI A++ AG+ + P + G + LL Sbjct: 283 IMALVGGIEAPHGRVMGHAGAWTAAGEPNARTKIQALQSAGVVMVDHPEKFGEGMKALLA 342 >gi|317030887|ref|XP_001392414.2| CoA-ligase [Aspergillus niger CBS 513.88] Length = 680 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 127/300 (42%), Positives = 198/300 (66%), Gaps = 9/300 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +T+VL QG TG+ T + ++++ + T++VGG+ P G ++ +PVF + Sbjct: 41 NLKIGAHTRVLFQGFTGRQATANVKESLEW-GTKIVGGVKPG-----VEGEHLGLPVFPS 94 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A+ER +AS IYVP + AI E+IEAEIPL+V + E +P+ D++R+ + L+ +S Sbjct: 95 VKAAQERAKPDASAIYVPGNQTAKAIEEAIEAEIPLVVAVAEHVPIHDILRIHSMLKTQS 154 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+G NCPGI++ C+IG P F G++GI+++SGTL+YE V T++ GLGQS Sbjct: 155 KTRLVGANCPGIISAIGKCRIGFQPLPCFAPGNIGIVAKSGTLSYETVASTTRAGLGQSL 214 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKP 238 + +GGD + GT F+D L++F D T+ I++VGEIGG+AE +AA+++KD +R KP Sbjct: 215 CISMGGDVLAGTNFVDALKIFEDDPDTDGIILVGEIGGTAEIDAAEWIKDYNQRTANPKP 274 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I+G V G APPGR MGHAGA + G+ GA+ K A++ AG+ + P + G + LLG Sbjct: 275 IMGLVGGLHAPPGRIMGHAGAWTAIGEPGAKAKYEALERAGVVMVNHPEKFGEGMKSLLG 334 >gi|320095658|ref|ZP_08027314.1| succinate--CoA ligase (ADP-forming) [Actinomyces sp. oral taxon 178 str. F0338] gi|319977379|gb|EFW09066.1| succinate--CoA ligase (ADP-forming) [Actinomyces sp. oral taxon 178 str. F0338] Length = 305 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 138/312 (44%), Positives = 192/312 (61%), Gaps = 21/312 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV------ 54 M+I ++ +++VLVQG+TG G HT + +L T VVGG +P+K T V Sbjct: 1 MTIFINSDSRVLVQGMTGSEGRKHTAR-MLSAGTAVVGGTNPRKAGTAVAFDVVGYGPAA 59 Query: 55 --------NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 VPVF TVAEA+ T AN SV++VPP+ A DA +E+I+A I +V ITEGIP Sbjct: 60 DRVRPGVAEVPVFGTVAEARAATGANVSVVFVPPAFAKDAALEAIDAGIETVVVITEGIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D V R + +RLIGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VQDSVVFVDRALEKGTRLIGPNCPGIISPAQSNVGITPADITGPGRIGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + +G +T +GIGGDPV GT ID L+ F AD T+ +VM+GEIGG AEE AA + Sbjct: 180 MHELRD--IGFTTCLGIGGDPVVGTTHIDALKAFEADPDTDLVVMIGEIGGDAEERAAAW 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 + + KP+V ++AG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 ISENM----TKPVVAYIAGFTAPEGKTMGHAGAIVSGSSGTAAAKAEALEAVGVRVGRTP 293 Query: 287 ARIGRSLVELLG 298 ++ ELL Sbjct: 294 SQTALIARELLA 305 >gi|256370717|ref|YP_003108542.1| succinyl-CoA synthetase subunit alpha [Candidatus Sulcia muelleri SMDSEM] gi|256009509|gb|ACU52869.1| succinyl-CoA synthetase, alpha subunit [Candidatus Sulcia muelleri SMDSEM] Length = 292 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 149/297 (50%), Positives = 202/297 (68%), Gaps = 9/297 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL++K +K++VQG TGK G+FH++Q I Y T ++GG+ P + P+F Sbjct: 1 MSILINKFSKIIVQGFTGKEGSFHSQQMIDY-GTPIIGGVTP----GKGGKKFLGKPIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-K 119 TV EA + AN S+I+VPP A DAIIESI++ I +IVCITEGIP DM+++K + K Sbjct: 56 TVEEAVKALNANVSIIFVPPRYAYDAIIESIDSGIKIIVCITEGIPRSDMIKIKNYINLK 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + LIGPNCPGI+TP+ K+GIMPG IF+KG VGI+S+SGTLTYEA Q + G G ST Sbjct: 116 KKTILIGPNCPGIITPNEAKVGIMPGFIFKKGKVGIVSKSGTLTYEAADQIVKSGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDP+ GT ++ FL D T+ IV++GEIGG E +AA K + +KK Sbjct: 176 AVGIGGDPIIGTTMKYIISEFLNDSETDIIVIIGEIGGKLEIDAA---KFLKLKKKKKIC 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + F+AG+TAP GRTMGHAGA+I A K+ MK+ GI + SP++IG +L+++ Sbjct: 233 LSFIAGQTAPKGRTMGHAGAIIGHKNDTAFYKMEIMKKCGIFLVKSPSQIGENLIKI 289 >gi|94985193|ref|YP_604557.1| succinyl-CoA synthetase, alpha subunit [Deinococcus geothermalis DSM 11300] gi|94555474|gb|ABF45388.1| succinyl-CoA synthetase, alpha subunit [Deinococcus geothermalis DSM 11300] Length = 303 Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 142/309 (45%), Positives = 197/309 (63%), Gaps = 20/309 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M ILV+K+T+VLV G+TG+ G+ HT +A+ TQ+V G+ P KG G VPV+ Sbjct: 1 MGILVNKDTQVLVVGITGREGSNHT-RAMKEFGTQIVAGVTPGKGGQTHEG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 +V EA+ + S+I+VPP+GA DA++ES A +PLIV ITEG+P +DM++ ++ Sbjct: 56 SVKEAQAEHRIDTSIIFVPPAGAADAVLESAHAGVPLIVLITEGVPTVDMMKAVQEVKAL 115 Query: 119 --------KSSSRLIGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQ 169 RLIG NCPG++T CK+GIMP I+ +KG VG++SRSGTLTYEA Sbjct: 116 DRANRAEGGPGIRLIGGNCPGLVTSGECKVGIMPNRIYEQKGRVGLISRSGTLTYEAAKL 175 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 GLG ST VGIGGDPV GT F DVL +F AD T+++V++GEIGG+ EE AA + Sbjct: 176 LLDAGLGTSTTVGIGGDPVIGTTFADVLPMFEADPETDAVVVIGEIGGADEEAAA----E 231 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KKP+V F++G++AP G+ MGHAGA+I G G E K+ A + AG+ +A + I Sbjct: 232 YIAANMKKPVVAFISGRSAPKGKRMGHAGAIIMGDVGTPESKLAAFQAAGVPVADTMPEI 291 Query: 290 GRSLVELLG 298 + + L Sbjct: 292 VELVKKALK 300 >gi|323650192|gb|ADX97182.1| mitochondrial succinate-CoA ligase GDP-forming alpha subunit [Perca flavescens] Length = 271 Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 149/250 (59%), Positives = 187/250 (74%), Gaps = 6/250 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + K+TKV+ QG TGK GTFH++Q++ Y +Q+VGG+ P KG G +PVF + Sbjct: 27 NLYITKSTKVICQGFTGKQGTFHSQQSLDY-GSQLVGGVSPGKGGKTHLG----LPVFNS 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EAKE T A+A+VIYVPP A AIIE+I+AEIPL+VCITEGIP DMVRVK +L + Sbjct: 82 VKEAKEGTGADATVIYVPPPFAAAAIIEAIDAEIPLVVCITEGIPQQDMVRVKHKLLRQG 141 Query: 122 S-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 142 TTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLC 201 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 +GIGGDP GT FID LE+FL D TE I+++GEIGG+AEE AA++LK KP+V Sbjct: 202 IGIGGDPFNGTNFIDCLEVFLQDPKTEGIILIGEIGGNAEENAAEYLKQHNSGANSKPVV 261 Query: 241 GFVAGKTAPP 250 F+AG TAPP Sbjct: 262 SFIAGLTAPP 271 >gi|212715823|ref|ZP_03323951.1| hypothetical protein BIFCAT_00724 [Bifidobacterium catenulatum DSM 16992] gi|212661190|gb|EEB21765.1| hypothetical protein BIFCAT_00724 [Bifidobacterium catenulatum DSM 16992] Length = 307 Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 131/311 (42%), Positives = 195/311 (62%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNV 54 M++ ++ V+VQG+TG G HT + +L T +VGG++ +K G ++ Sbjct: 1 MTLFIEDGAPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNARKAGQEVNFPEAKNGEDI 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + VF + +EA E T A ASV++VPP A DA++E+IEA I LIV ITEGIPV D Sbjct: 60 TLRVFGSCSEAVETTGAQASVVFVPPRFAKDAVVEAIEAGIKLIVVITEGIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGILTPDS------CKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R++GPNCPG+LT S C +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALRKGVRIVGPNCPGLLTLSSMEGAQGCNLGIIPDGIVSRGPLGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G GGDP+ GT + LE F D+AT+++VM+GEIGGSAE++AA++ Sbjct: 180 ELSD--IGFTACLGAGGDPIVGTTLQEALEAFENDDATKAVVMIGEIGGSAEQDAAKWAS 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + KP+V ++AG TAP GR MGHAGA++SGGKG A+DK A++ GI + +P + Sbjct: 238 EHM----TKPVVAYIAGFTAPEGRQMGHAGAIVSGGKGTAQDKKEALEAVGIRVGRTPGQ 293 Query: 289 IGRSLVELLGS 299 + E+L S Sbjct: 294 TAEIMREVLAS 304 >gi|225574244|ref|ZP_03782854.1| hypothetical protein RUMHYD_02308 [Blautia hydrogenotrophica DSM 10507] gi|225038534|gb|EEG48780.1| hypothetical protein RUMHYD_02308 [Blautia hydrogenotrophica DSM 10507] Length = 289 Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 118/298 (39%), Positives = 183/298 (61%), Gaps = 9/298 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+ K TKVLVQ +TGK+G+ T+ +L T++V G+ P KG G VPV+ Sbjct: 1 MAILIGKETKVLVQAITGKSGSLQTK-VMLDAGTKIVAGVTPGKGGQEVHG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 ++EAK+ + + +VPP+ A D+ E+I+A I L+V TE I + D+V + A + Sbjct: 56 YISEAKKEHDFDTVISFVPPAAAKDSCFEAIDAGIRLLVLTTEEIALQDVVEIIAYAKAH 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GP C G++ P +CK+G P F G VG++S+SG L+YE + G+GQS Sbjct: 116 GTTLVGPGCAGVIAPGTCKVGAHPVRFFCPGQVGVVSKSGALSYEIGKTLTDNGIGQSGV 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 V IGG P+ G D +EL+ D T+ IV++GEIGG +EEEAA ++K KP+V Sbjct: 176 VAIGGGPIWGFTQRDAIELYEEDPDTKVIVLLGEIGGGSEEEAAAYIKAHV----TKPVV 231 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + G+ AP G+++GHAGA++SG G A+ KI A+++AG+ + +P + + + LL Sbjct: 232 SLIVGRNAPQGKSLGHAGAIVSGNVGTAKTKIEALQDAGVHVVKNPVEMVKVIRALLS 289 >gi|300786450|ref|YP_003766741.1| succinyl-CoA synthetase alpha subunit [Amycolatopsis mediterranei U32] gi|299795964|gb|ADJ46339.1| succinyl-CoA synthetase alpha subunit [Amycolatopsis mediterranei U32] Length = 294 Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 129/301 (42%), Positives = 188/301 (62%), Gaps = 9/301 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I +D+N++++V G+TG G HT + +L T VVGG++P+K ++PVF Sbjct: 1 MAIFLDENSRIVVSGITGSEGAKHTRR-MLAAGTNVVGGVNPRKAGQQVELSGRSLPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD--MVRVKARLE 118 +VA++ T A+ V++VPP DA+IE+++A I L V I EG+PV D + A Sbjct: 60 SVADSTAATGADVCVLFVPPPFVADAVIEAVDAGIGLAVVIAEGVPVHDSARLWAHAVAA 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPGI++P GI+P I G +G++S+SGTLTY+ + + +G S Sbjct: 120 GGRTRIIGPNCPGIISPGRSNAGIIPADITGPGRIGLVSKSGTLTYQLMHELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VGIGGDP+ GT ID +E F D T+ IV++GEIGG AEE AA+F++ KP Sbjct: 178 TCVGIGGDPIIGTTHIDAVEAFEKDPETDLIVLIGEIGGDAEERAAEFVRANVS----KP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +VG+VAG TAP G+TMGHAGA++SG G A K A++ AGI + +P+ E+L Sbjct: 234 VVGYVAGFTAPEGKTMGHAGAIVSGSAGTAAAKKEALEAAGIRVGRTPSETAALAREVLA 293 Query: 299 S 299 Sbjct: 294 R 294 >gi|242768237|ref|XP_002341527.1| succinyl-CoA synthetase subunit alpha, putative [Talaromyces stipitatus ATCC 10500] gi|218724723|gb|EED24140.1| succinyl-CoA synthetase subunit alpha, putative [Talaromyces stipitatus ATCC 10500] Length = 678 Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 123/301 (40%), Positives = 196/301 (65%), Gaps = 9/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +TKVL QG TG+ T + ++++ + T++VGG+ P G ++++P+F + Sbjct: 36 NLKIGAHTKVLYQGFTGRQATANAKESLKW-GTKIVGGVKPG-----VEGEHLDLPIFPS 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V AKE++ +AS IYVP + AI E+IEAEIPL+V + E +PV DM+R+ + L+ +S Sbjct: 90 VRVAKEKSNPDASAIYVPGNQTAQAIEEAIEAEIPLVVAVAEHVPVHDMLRIHSILQTQS 149 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+G NCPGI++ C+IG P F G +G++++SGTL+YE V ++ GLGQS Sbjct: 150 KTRLVGANCPGIISAVGKCRIGFQPLPCFTPGRIGVVAKSGTLSYETVGSLTRAGLGQSL 209 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKP 238 + +GGD + GT F+D L++F D T+ IV++GEIGG+AE +AA+++KD + + KP Sbjct: 210 CISMGGDVLAGTNFVDALKVFEDDPDTDGIVLIGEIGGTAEMDAAEWIKDYHKRTTKPKP 269 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I+ V G AP GR MGHAGA ++ G+ A K A+++AG+ + P + G + ELL Sbjct: 270 IMALVGGLEAPKGRVMGHAGAWVAPGEPDARAKYEALQKAGVTLVSHPEKFGPGMKELLK 329 Query: 299 S 299 Sbjct: 330 D 330 >gi|219666261|ref|YP_002456696.1| CoA-binding protein [Desulfitobacterium hafniense DCB-2] gi|219536521|gb|ACL18260.1| CoA-binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 292 Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 118/300 (39%), Positives = 188/300 (62%), Gaps = 11/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI++D T VL+QG+TGK G+F + A Y T +V G+ P K G +PV+ Sbjct: 1 MSIIIDHTTPVLIQGITGKEGSFWAKHAKNY-GTHIVAGVTPGKEGQDVDG----IPVYH 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV A + AS++ VPP A A++E++++ I +IV EGIP+ +M++++ + Sbjct: 56 TVRRAVQEHPIEASLLVVPPKAAKGAVLEALDSGIKVIVVTAEGIPLHEMMQLRKIALEK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + +IG N GI++ +G P +++ G VG+++RSG+LT E + + G G Sbjct: 116 QAMVIGGNTTGIISTGKAMMGFFPYWLDRVYKPGRVGVMTRSGSLTNEVTAEIVKAGFGP 175 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S+ VG+GGDPV T F ++L LF D T+++VM+GEIGG+ EE+ A+ ++ +R K Sbjct: 176 SSIVGVGGDPVPLTRFAEILPLFEKDPDTDAVVMIGEIGGTMEEDVAEAIE---QRIFTK 232 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P++GF+ G+TAP G+ MGHAGA+I+ GKG EDK+ A+ +AG +A P+ IG+ L ++L Sbjct: 233 PLIGFMGGRTAPKGQKMGHAGAIITAGKGTVEDKVEALAKAGALVADRPSMIGQLLQKVL 292 >gi|325927499|ref|ZP_08188738.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas perforans 91-118] gi|325542126|gb|EGD13629.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Xanthomonas perforans 91-118] Length = 237 Score = 253 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 148/246 (60%), Positives = 184/246 (74%), Gaps = 11/246 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++KNTKV+VQG TG+ GTFH Q + Y TQVVGG+ P KG T +N+PVF Sbjct: 1 MSVLINKNTKVIVQGFTGQQGTFHATQMVEY-GTQVVGGVTPGKGGTTH----INLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVA+A + T A+ASVIYVPP A DAI+E+ A I +IVCITEGIPVLDM+RVK L +S Sbjct: 56 TVADAVQATGADASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRS 115 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + LIGPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQS Sbjct: 116 HPDTVLIGPNCPGVITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQS 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDP+ G F+D L+LF D TE I+MVGEIGG AEE A+++K+ KKP Sbjct: 176 TCIGIGGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKNHV----KKP 231 Query: 239 IVGFVA 244 +VGF+A Sbjct: 232 VVGFIA 237 >gi|55377355|ref|YP_135205.1| succinyl-CoA synthetase subunit alpha [Haloarcula marismortui ATCC 43049] gi|55230080|gb|AAV45499.1| succinyl-CoA synthetase alpha chain [Haloarcula marismortui ATCC 43049] Length = 290 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 149/299 (49%), Positives = 207/299 (69%), Gaps = 11/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LVD++T+V+VQG+TG G FHTEQ + Y V G + P +G G VPVF Sbjct: 1 MSVLVDEDTRVVVQGITGGEGKFHTEQMLEYGTNVVAGAV-PGRGGQEVAG----VPVFD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKARLEK 119 TV A ANA+V++VPP+ AGDA E+++A I L+V ITEGIP DM RV +L++ Sbjct: 56 TVQGAAREADANAAVVFVPPAFAGDACFEALDAKGIDLVVAITEGIPTQDMARVYRKLQE 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + + L+GPNCPG++TP K+GI+PG+IF G+VG++SRSGTLTY+ V + G+GQST Sbjct: 116 TDTHLVGPNCPGVITPGVAKLGILPGNIFSSGNVGLVSRSGTLTYQVVDNLTNRGIGQST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDP+ GT+FI LE F AD T ++VM GEIGG EEEAA+F+ + P+ Sbjct: 176 AIGIGGDPIIGTDFIGALEQFEADPDTHAVVMCGEIGGEDEEEAARFIGEHM----DTPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GF+AG+TAPPG+ MGHAGA++SG G G A+ KI A+++ G+ + +P + + +LL Sbjct: 232 AGFIAGRTAPPGKRMGHAGAIVSGSGTGTAQSKITALEDNGVPVGDTPEEVADHVEDLL 290 >gi|146322592|ref|XP_752448.2| succinyl-CoA synthetase subunit alpha [Aspergillus fumigatus Af293] gi|129557744|gb|EAL90410.2| succinyl-CoA synthetase subunit alpha, putative [Aspergillus fumigatus Af293] gi|159131203|gb|EDP56316.1| succinyl-CoA synthetase, alpha subunit, putative [Aspergillus fumigatus A1163] Length = 678 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 130/301 (43%), Positives = 195/301 (64%), Gaps = 9/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +T+VL QG TG+ T + ++++ + T++VGG+ P G ++ +PVF + Sbjct: 37 NLKIGAHTRVLFQGFTGRQATANVKESLAW-GTKIVGGVKPG-----VEGEHLGLPVFPS 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A+ER +AS IYVP + AI E+IEAEIPL+V + E +P+ DM+RV + L+ +S Sbjct: 91 VRAAQERAKPDASAIYVPGNQTAKAIEEAIEAEIPLVVAVAEHVPIHDMLRVHSMLQTQS 150 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+G NCPGI++ C+IG P F G VGI+++SGTL+YE V T++ GLGQS Sbjct: 151 KTRLVGANCPGIISAIGKCRIGFQPLPCFSPGKVGIVAKSGTLSYETVASTTRAGLGQSL 210 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKP 238 + +GGD + GT F+D L++F D TE I++VGEIGG AE +AA +++D KR KP Sbjct: 211 CISMGGDVLAGTNFVDALKVFEEDPDTEGIILVGEIGGIAEIDAADWIRDYNKRTANPKP 270 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I+ V G+ APPGR MGHAGA I+ G+ AE K A++ AG+ + P + G+ + LL Sbjct: 271 IMALVGGREAPPGRVMGHAGAWITPGEPDAEAKHRALESAGVTMVDHPEKFGQGMKALLA 330 Query: 299 S 299 Sbjct: 331 R 331 >gi|298345239|ref|YP_003717926.1| succinate--CoA ligase [Mobiluncus curtisii ATCC 43063] gi|315655661|ref|ZP_07908559.1| succinyl-CoA synthetase subunit alpha [Mobiluncus curtisii ATCC 51333] gi|298235300|gb|ADI66432.1| succinate--CoA ligase (ADP-forming) [Mobiluncus curtisii ATCC 43063] gi|315489725|gb|EFU79352.1| succinyl-CoA synthetase subunit alpha [Mobiluncus curtisii ATCC 51333] Length = 307 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 147/313 (46%), Positives = 200/313 (63%), Gaps = 21/313 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT---------- 50 MSI +D+N+KV+VQG+TG G HT + + Y T+VV G +PKK T Sbjct: 1 MSIFLDENSKVIVQGMTGSEGRKHTTRMLAY-GTKVVAGTNPKKAGTTVEFDVVPYGPLV 59 Query: 51 ----GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 GG V+VPV+ TVA+AK T AN SVI+VPP+GA AIIE+++A + L+V ITE IP Sbjct: 60 DSVQGGTVSVPVYGTVADAKAATGANTSVIFVPPAGAKGAIIEAVDAGMELVVVITEHIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D A + R+IGPNCPGI++P +GI PG I +G +G++S+SGTLTY+ Sbjct: 120 VQDTNAAFAYAKSHGVRMIGPNCPGIISPGKSNVGITPGDITPRGKLGLVSKSGTLTYQM 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ LG +T +GIGGDP+ GT ID LE F D TE IVM+GEIGG AEE AA + Sbjct: 180 MYELRD--LGFTTCIGIGGDPIIGTTHIDALEAFEQDPETELIVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +K+ KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IKEHV----TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTP 293 Query: 287 ARIGRSLVELLGS 299 + R E++ S Sbjct: 294 SETARIAREIMQS 306 >gi|161833762|ref|YP_001597958.1| succinyl-CoA synthetase subunit alpha [Candidatus Sulcia muelleri GWSS] gi|152206252|gb|ABS30562.1| succinyl-CoA synthetase, alpha subunit [Candidatus Sulcia muelleri GWSS] Length = 291 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 153/299 (51%), Positives = 205/299 (68%), Gaps = 9/299 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+K +K++VQG TGK G+FH+ + I Y T ++GG+ P KG G P+F Sbjct: 1 MSILVNKFSKIIVQGFTGKEGSFHSHKMISY-GTPIMGGVTPGKGGKIHLGK----PIFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++ AN S+++VPP A DAIIESI + I +I+CITEGIP+ DM+++K + K Sbjct: 56 TVEEAVKKLNANISILFVPPMFAYDAIIESIYSGIKIIICITEGIPISDMLKIKNIINKK 115 Query: 121 SS-RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + LIGPNCPGI+TP+ K+GIMPG IF+KG VGI+S+SGTLTYEA Q + G G ST Sbjct: 116 KNCILIGPNCPGIITPNEAKVGIMPGFIFKKGRVGIVSKSGTLTYEAANQVVKSGYGIST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AVGIGGDP+ GT ++ F D T+ IVM+GEIGG E AA K + +KKP+ Sbjct: 176 AVGIGGDPIIGTSMKSIISEFFNDSETDIIVMIGEIGGKLEINAA---KWIKNQKKKKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +GF+AG+TAP GRTMGHAGA++ A KIN +K+ GI I SP++IG + ++L Sbjct: 233 LGFIAGQTAPKGRTMGHAGAIVGEKNDTAIYKINMLKKCGIKIIKSPSQIGDEVFKILK 291 >gi|239916965|ref|YP_002956523.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Micrococcus luteus NCTC 2665] gi|239838172|gb|ACS29969.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Micrococcus luteus NCTC 2665] Length = 306 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 149/311 (47%), Positives = 206/311 (66%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++K++KV+VQG+TG GT HT + +L T +VGG++ +K T G V Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHT-RLMLKAGTNIVGGVNARKAGTTVSHEDKDGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV EA E+T A+ SV +VPP+ A DA IE+IEAEIPL+V ITEGIPV D + A Sbjct: 60 LPVFGTVKEAMEKTGADVSVAFVPPAFAKDAAIEAIEAEIPLLVVITEGIPVQDTAKFFA 119 Query: 116 RLE-------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + K +R+IGPNCPG++TP GI P +I G +G++S+SGTLTY+ ++ Sbjct: 120 LSQSKTGEDGKPKTRIIGPNCPGVITPGEALAGITPATITGSGPIGLVSKSGTLTYQMMY 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + G STA+GIGGDP+ GT ID LE F AD T++IVM+GEIGG AEE AA+F+K Sbjct: 180 ELRD--FGFSTAIGIGGDPIIGTTHIDALEAFEADPDTQAIVMIGEIGGDAEERAAEFIK 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 KP+VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ Sbjct: 238 ANV----TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSE 293 Query: 289 IGRSLVELLGS 299 + + E+L + Sbjct: 294 TAQLMREILQA 304 >gi|304390799|ref|ZP_07372751.1| succinyl-CoA synthetase subunit alpha [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315656424|ref|ZP_07909313.1| succinyl-CoA synthetase subunit alpha [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|304325682|gb|EFL92928.1| succinyl-CoA synthetase subunit alpha [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492983|gb|EFU82585.1| succinyl-CoA synthetase subunit alpha [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 307 Score = 252 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 147/313 (46%), Positives = 200/313 (63%), Gaps = 21/313 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT---------- 50 MSI +D+N+KV+VQG+TG G HT + + Y T+VV G +PKK T Sbjct: 1 MSIFLDENSKVIVQGMTGSEGRKHTTRMLAY-GTKVVAGTNPKKAGTTVDFDVVPYGPLA 59 Query: 51 ----GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 GG V+VPV+ TVA+AK T AN SVI+VPP+GA AIIE+++A + L+V ITE IP Sbjct: 60 DSVQGGTVSVPVYGTVADAKAATGANTSVIFVPPAGAKGAIIEAVDAGMELVVVITEHIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D A + R+IGPNCPGI++P +GI PG I +G +G++S+SGTLTY+ Sbjct: 120 VQDTNAAFAYAKSHGVRMIGPNCPGIISPGKSNVGITPGDITPRGKLGLVSKSGTLTYQM 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ LG +T +GIGGDP+ GT ID LE F D TE IVM+GEIGG AEE AA + Sbjct: 180 MYELRD--LGFTTCIGIGGDPIIGTTHIDALEAFEQDPETELIVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +K+ KP+VG+VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IKEHV----TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTP 293 Query: 287 ARIGRSLVELLGS 299 + R E++ S Sbjct: 294 SETARIAREIMQS 306 >gi|123976133|ref|XP_001330450.1| hypothetical protein [Trichomonas vaginalis G3] gi|1710866|sp|P53400|SUCA2_TRIVA RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha-2; Short=SCS-alpha-2; Flags: Precursor gi|538511|gb|AAC41559.1| succinyl CoA synthetase-2 alpha subunit [Trichomonas vaginalis] gi|2290208|gb|AAC48338.1| adhesin protein AP33-2 [Trichomonas vaginalis] gi|121896794|gb|EAY01935.1| hypothetical protein TVAG_047890 [Trichomonas vaginalis G3] Length = 309 Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats. Identities = 147/299 (49%), Positives = 209/299 (69%), Gaps = 8/299 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DK+T+V++QG+ G G +H+ Y T+VVG +HPKK G +P+F + Sbjct: 15 LFIDKDTRVVIQGI-GNQGQYHSRLMREY-GTKVVGAVHPKKAGKIIAG----LPIFKNM 68 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E +RT ANAS+I+VP GA A IE+ EA + L+VCITE IP DM++VK ++++ Sbjct: 69 KEVVKRTDANASLIFVPAPGAAAACIEAAEAGMGLVVCITEHIPQHDMIKVKKVMKETGC 128 Query: 123 RLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +LIGPNCPG++ P K+GI+P +IFR G +GI+SRSGTLTYEA + T+Q GLGQST V Sbjct: 129 QLIGPNCPGLIQPGTHTKLGIIPTNIFRNGKIGIVSRSGTLTYEAAYATTQAGLGQSTVV 188 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP G DV++ F AD TE I+++GEIGG++EE+AA+++ + K ++KP+V Sbjct: 189 GIGGDPFAGQLHTDVIKRFAADPQTEGIILIGEIGGTSEEDAAEWI-AKTKLTQEKPVVA 247 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPG+ MGHAGA++SGGKG AE K A++ AG+ IA P +G+ + E + L Sbjct: 248 FIAGATAPPGKRMGHAGAIVSGGKGTAEGKYKALEAAGVRIARHPGNMGKFIFEEMKRL 306 >gi|89893729|ref|YP_517216.1| hypothetical protein DSY0983 [Desulfitobacterium hafniense Y51] gi|219668104|ref|YP_002458539.1| succinyl-CoA synthetase, subunit alpha [Desulfitobacterium hafniense DCB-2] gi|89333177|dbj|BAE82772.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219538364|gb|ACL20103.1| succinyl-CoA synthetase, alpha subunit [Desulfitobacterium hafniense DCB-2] Length = 293 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 129/295 (43%), Positives = 194/295 (65%), Gaps = 9/295 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M ++++K+T V+VQG TGK G++H + A+L T+VV G+ P +G G +PV+ Sbjct: 1 MGLIINKDTHVIVQGGTGKQGSYHVK-AMLEYGTKVVAGVTPGRGGNQVGG----LPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EAKER +AS+I VP A IE+I+A +PLIV +TE IPV D +++ A ++ Sbjct: 56 TVREAKERHKIDASLIMVPAPFVLSAAIEAIDAGVPLIVIVTEHIPVKDTMKINALAQEK 115 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 RL+GPN G++ + KIGIMPG ++ G +G++SRSGTL++E +GLG ST Sbjct: 116 GCRLLGPNTIGVINCREKVKIGIMPGFLYGSGRIGLISRSGTLSHETASNLMFKGLGVST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGD + GT+F+D L+ F D+ TE++VM+GEIGG+ EE+AA++L+ KP+ Sbjct: 176 VIGIGGDQIIGTDFVDALKDFKEDQDTEAVVMLGEIGGNREEKAAEYLQ---SCDYGKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AG+ APPG+ MGHAGA+I G G + K + +++AG+ IA S + S+ Sbjct: 233 FCFIAGRNAPPGKKMGHAGAIIQGSAGTVQSKEDKLRQAGVRIAVSLEDLVESVA 287 >gi|306819105|ref|ZP_07452819.1| succinyl-CoA synthetase [Mobiluncus mulieris ATCC 35239] gi|304648081|gb|EFM45392.1| succinyl-CoA synthetase [Mobiluncus mulieris ATCC 35239] Length = 307 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 138/313 (44%), Positives = 196/313 (62%), Gaps = 21/313 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT---------- 50 MSI +++N+K++VQG+TG G HT + + Y T++V G +PKK T Sbjct: 1 MSIFLNENSKIIVQGMTGSEGRKHTTRMLAY-GTKIVAGTNPKKAGTSIDFDITPYGPLA 59 Query: 51 ----GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 GG V++PV+ TVAEAK T AN SVI+VPP A AI+E+++A + L+V ITE IP Sbjct: 60 EQLQGGTVSIPVYGTVAEAKAATGANTSVIFVPPVAAKGAILEAVDAGLDLVVVITEHIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D A + R+IGPNCPGI++P +GI PG I +G +G++S+SGTLTY+ Sbjct: 120 VQDANFALAYARERGVRVIGPNCPGIISPGKSNVGITPGDITPRGHLGLVSKSGTLTYQM 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ LG +T +GIGGDP+ GT ID L F D T+ IVM+GEIGG AEE AA + Sbjct: 180 MYELRD--LGFTTCIGIGGDPIIGTTHIDALAAFEQDPETKLIVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +K+ KP+V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IKEHV----TKPVVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVKVGKTP 293 Query: 287 ARIGRSLVELLGS 299 + R E++ + Sbjct: 294 SETARIAREIMSA 306 >gi|269977459|ref|ZP_06184431.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Mobiluncus mulieris 28-1] gi|269934375|gb|EEZ90937.1| succinyl-CoA ligase [ADP-forming] subunit alpha [Mobiluncus mulieris 28-1] Length = 307 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 138/313 (44%), Positives = 196/313 (62%), Gaps = 21/313 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT---------- 50 MSI +++N+K++VQG+TG G HT + + Y T++V G +PKK T Sbjct: 1 MSIFLNENSKIIVQGMTGSEGRKHTTRMLAY-GTKIVAGTNPKKAGTSIDFDITPYGPLA 59 Query: 51 ----GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 GG V++PV+ TVAEAK T AN SVI+VPP A AI+E+++A + L+V ITE IP Sbjct: 60 DQLQGGTVSIPVYGTVAEAKAATGANTSVIFVPPVAAKGAILEAVDAGLDLVVVITEHIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D A + R+IGPNCPGI++P +GI PG I +G +G++S+SGTLTY+ Sbjct: 120 VQDANFALAYARERGVRVIGPNCPGIISPGKSNVGITPGDITPQGHLGLVSKSGTLTYQM 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ LG +T +GIGGDP+ GT ID L F D T+ IVM+GEIGG AEE AA + Sbjct: 180 MYELRD--LGFTTCIGIGGDPIIGTTHIDALAAFEQDPETKLIVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +K+ KP+V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IKEHV----TKPVVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVKVGKTP 293 Query: 287 ARIGRSLVELLGS 299 + R E++ + Sbjct: 294 SETARIAREIMSA 306 >gi|169781606|ref|XP_001825266.1| CoA-ligase [Aspergillus oryzae RIB40] gi|83774008|dbj|BAE64133.1| unnamed protein product [Aspergillus oryzae] Length = 688 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 126/301 (41%), Positives = 194/301 (64%), Gaps = 9/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +T+VL QG TG+ T + ++++ + T++VGG+ P G ++ +PVF + Sbjct: 42 NLKIGAHTRVLFQGFTGRQATANVKESLAW-GTKIVGGVKPG-----VEGEHLGLPVFPS 95 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A+E+ +AS IYVP + AI E+IEAEIPL+V + E +P+ D++R+ + L+ +S Sbjct: 96 VKAAQEKAKPDASAIYVPGNQTAKAIEEAIEAEIPLVVAVAEHVPIHDVLRIHSMLQTQS 155 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+G NCPGI++ C++G P F G +GI+++SGTL+YE V TS+ GLGQS Sbjct: 156 KTRLVGANCPGIISAIGKCRVGFQPLPCFSPGKIGIVAKSGTLSYETVASTSRAGLGQSL 215 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKP 238 + +GGD + GT F+D L++F D TE I++VGEIGG+AE +AA+++KD +R KP Sbjct: 216 CISMGGDVLAGTNFVDALKIFENDPDTEGIILVGEIGGTAEIDAAEWIKDYNRRTANPKP 275 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I+G V G AP GR MGHAGA + G+ GA K A++ AG + P + G + LL Sbjct: 276 IMGLVGGLHAPAGRIMGHAGAWTAVGEPGAHAKYQALERAGAVMVNHPEKFGEGMKTLLN 335 Query: 299 S 299 S Sbjct: 336 S 336 >gi|227875824|ref|ZP_03993950.1| succinate--CoA ligase (ADP-forming) [Mobiluncus mulieris ATCC 35243] gi|227843572|gb|EEJ53755.1| succinate--CoA ligase (ADP-forming) [Mobiluncus mulieris ATCC 35243] Length = 307 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 138/313 (44%), Positives = 196/313 (62%), Gaps = 21/313 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT---------- 50 MSI +++N+K++VQG+TG G HT + + Y T++V G +PKK T Sbjct: 1 MSIFLNENSKIIVQGMTGSEGRKHTTRMLAY-GTKIVAGTNPKKAGTSIDFDITPYGPLA 59 Query: 51 ----GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 GG V++PV+ TVAEAK T AN SVI+VPP A AI+E+++A + L+V ITE IP Sbjct: 60 EQLQGGTVSIPVYGTVAEAKAATGANTSVIFVPPVAAKGAILEAVDAGLDLVVVITEHIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D A + R+IGPNCPGI++P +GI PG I +G +G++S+SGTLTY+ Sbjct: 120 VQDANFALAYARERGVRVIGPNCPGIISPGKSNVGITPGDITPRGHLGLVSKSGTLTYQM 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ LG +T +GIGGDP+ GT ID L F D T+ IVM+GEIGG AEE AA + Sbjct: 180 MYELRD--LGFTTCIGIGGDPIIGTTHIDALAAFEQDPETKLIVMIGEIGGDAEERAATY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +K+ KP+V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IKEHV----TKPVVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVKVGKTP 293 Query: 287 ARIGRSLVELLGS 299 + R E++ + Sbjct: 294 SETARIAREIMSA 306 >gi|313793370|gb|EFS41428.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL110PA1] gi|313800986|gb|EFS42254.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL110PA2] gi|313838060|gb|EFS75774.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL086PA1] gi|314963430|gb|EFT07530.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL082PA1] gi|315077279|gb|EFT49341.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL053PA2] gi|327451703|gb|EGE98357.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL092PA1] Length = 298 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 141/302 (46%), Positives = 197/302 (65%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 M+I++D+N+K++VQG+TG G HT Q +L T VVGG++P+K T G VPV+ Sbjct: 1 MAIILDQNSKIIVQGMTGSEGMKHT-QRMLDSGTAVVGGVNPRKAGTTVDFNGGTTVPVY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V +A E T AN SVI+VP A++E+IEAE+PL+VCITEG+PV D ++ Sbjct: 60 GSVKQAVEATGANVSVIFVPAKFTKSAVMEAIEAEMPLVVCITEGVPVKDTAEFFTAAQR 119 Query: 120 SS-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S +R+IGPNCPGI++P GI+P I G VG++S+SGTLTY+ +++ LG S Sbjct: 120 SGKTRIIGPNCPGIISPGKSNAGIVPADITGPGRVGLVSKSGTLTYQLMYEVRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA+++ + KP Sbjct: 178 TAIGIGGDPIIGTTHIDALQAFQDDPETDIIVMIGEIGGDAEERAAKYISEHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P R E + Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTPTETARLAHEAME 293 Query: 299 SL 300 SL Sbjct: 294 SL 295 >gi|307700355|ref|ZP_07637395.1| succinyl-CoA synthetase, alpha subunit [Mobiluncus mulieris FB024-16] gi|307614566|gb|EFN93795.1| succinyl-CoA synthetase, alpha subunit [Mobiluncus mulieris FB024-16] Length = 307 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 138/313 (44%), Positives = 196/313 (62%), Gaps = 21/313 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT---------- 50 MSI +++N+K++VQG+TG G HT + + Y T++V G +PKK T Sbjct: 1 MSIFLNENSKIIVQGMTGSEGRKHTTRMLAY-GTKIVAGTNPKKAGTSIDFDITPYGPLA 59 Query: 51 ----GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 GG V++PV+ TVAEAK T AN SVI+VPP A AI+E+++A + L+V ITE IP Sbjct: 60 DQLQGGAVSIPVYGTVAEAKAATGANTSVIFVPPVAAKGAILEAVDAGLDLVVVITEHIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D A + R+IGPNCPGI++P +GI PG I +G +G++S+SGTLTY+ Sbjct: 120 VQDANFALAYARERGVRVIGPNCPGIISPGKSNVGITPGDITPQGHLGLVSKSGTLTYQM 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ LG +T +GIGGDP+ GT ID L F D T+ IVM+GEIGG AEE AA + Sbjct: 180 MYELRD--LGFTTCIGIGGDPIIGTTHIDALAAFEQDPETKLIVMIGEIGGDAEERAAAY 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 +K+ KP+V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 IKEHV----TKPVVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVKVGKTP 293 Query: 287 ARIGRSLVELLGS 299 + R E++ + Sbjct: 294 SETARIAREIMSA 306 >gi|85706364|ref|ZP_01037458.1| SucD [Roseovarius sp. 217] gi|85669137|gb|EAQ24004.1| SucD [Roseovarius sp. 217] Length = 299 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 136/282 (48%), Positives = 183/282 (64%), Gaps = 8/282 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I V+ T+++VQG+TG++GTF+T++++ Y T V G + P KG G +P+F Sbjct: 1 MAIFVNSETRLIVQGMTGRSGTFYTDESMRYGTTCVGG-VRPGKGGARHLG----LPLFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T ANAS++ VP AG A+IE+IEA I +VC+TE +P DM RVK L + Sbjct: 56 TVREAVDATGANASLVIVPAPQAGAAMIEAIEAGIGTVVCVTERVPQHDMSRVKQALAGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPN GILTP+ CKIG+MP + G +GI SRS +LT E + Q S GLGQST Sbjct: 116 DTVLIGPNSQGILTPEQCKIGVMPTGNAKPGHIGIASRSASLTSEILAQCSTAGLGQSTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGD + G F++ L+ F D TE++V++GEIGG AEEEAA +L KP+V Sbjct: 176 VGIGGDTLHGVGFVECLKAFRDDPETEAVVLIGEIGGRAEEEAAAYLD---SVDYGKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 V G+ AP GR MGHAG + G G A DKI ++ AG+ I Sbjct: 233 ALVVGRHAPRGRRMGHAGTLSVLGGGTAADKIARLRAAGVEI 274 >gi|206604100|gb|ACI16481.1| alpha-succinyl coenzyme A synthetase [Histomonas meleagridis] Length = 308 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 149/299 (49%), Positives = 203/299 (67%), Gaps = 8/299 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VD+NT+V+VQG+ G G H+ Y T+VV G+HPKK G +PVF +V Sbjct: 14 LFVDENTRVVVQGI-GNQGQSHSRLMREY-GTKVVAGVHPKKAGQIVAG----MPVFASV 67 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 +A E+T ANAS+I+VP SGA A+IE+ A + L+VCITE IP DM++VK L++ Sbjct: 68 KDAVEKTDANASLIFVPASGAAAAMIEAANAGVGLVVCITEHIPQHDMIKVKKVLKEKGV 127 Query: 123 RLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 LIGPNCPGI+ P CK+GI+P +I G +GI+SRSGTLTYEA + T+ GLGQST V Sbjct: 128 GLIGPNCPGIIQPRTHCKMGIIPTNIHTPGKIGIVSRSGTLTYEASYATTLAGLGQSTVV 187 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP G DV++ F D TE I+++GEIGG +EE+AA+++ ++KP+V Sbjct: 188 GIGGDPFAGQLHTDVVKRFAEDPHTEGIILIGEIGGQSEEDAAEWIAKNH-LTKEKPVVS 246 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPG+ MGHAGA+ISGGKG AE K A++ AG+ I+ P +G+ + E + L Sbjct: 247 FIAGATAPPGKRMGHAGAIISGGKGTAEGKYEALQAAGVRISRHPGNLGKFIFEEMKKL 305 >gi|317508745|ref|ZP_07966397.1| succinate-CoA ligase [Segniliparus rugosus ATCC BAA-974] gi|316252960|gb|EFV12378.1| succinate-CoA ligase [Segniliparus rugosus ATCC BAA-974] Length = 301 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 149/304 (49%), Positives = 202/304 (66%), Gaps = 14/304 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++K++KV+VQG+TG GT HT +L TQVVGG++ KK T G +V Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHTA-LMLKAGTQVVGGVNAKKAGTTVAHKGKDGNDVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV--RV 113 +PVF TVAEA E+T A+ S+ +VPP+ A+IE+IEAEIPL+V ITEG+PV D V Sbjct: 60 LPVFGTVAEAIEKTGADVSIAFVPPAFTKSAMIEAIEAEIPLLVVITEGVPVHDTVAAFA 119 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + + S +R+IGPNCPGI+TP +GI P +I G VG++S+SGTLTY+ +++ Sbjct: 120 HNKAKGSKTRVIGPNCPGIITPGESLVGITPANIAGSGPVGLVSKSGTLTYQMMYELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G STA+GIGGDPV GT ID ++ F D ATE IVM+GEIGG AEE AA ++K+ Sbjct: 179 -FGFSTAIGIGGDPVIGTSHIDAIKAFQEDPATELIVMIGEIGGDAEERAAAYIKENV-- 235 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP+V +VAG TAP G+TMGHAGA++SG G AE K A++ G+ + +P+ Sbjct: 236 --TKPVVAYVAGFTAPEGKTMGHAGAIVSGSAGTAEAKKAALEAVGVKVGKTPSGTAALA 293 Query: 294 VELL 297 E+L Sbjct: 294 REIL 297 >gi|50843214|ref|YP_056441.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes KPA171202] gi|289424948|ref|ZP_06426727.1| succinyl-CoA synthetase, alpha subunit [Propionibacterium acnes SK187] gi|295131279|ref|YP_003581942.1| succinate-CoA ligase [ADP-forming], alpha subunit [Propionibacterium acnes SK137] gi|50840816|gb|AAT83483.1| succinyl-CoA synthetase alpha subunit [Propionibacterium acnes KPA171202] gi|289154647|gb|EFD03333.1| succinyl-CoA synthetase, alpha subunit [Propionibacterium acnes SK187] gi|291376629|gb|ADE00484.1| succinate-CoA ligase [ADP-forming], alpha subunit [Propionibacterium acnes SK137] gi|313763124|gb|EFS34488.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL013PA1] gi|313773161|gb|EFS39127.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL074PA1] gi|313810357|gb|EFS48071.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL083PA1] gi|313812187|gb|EFS49901.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL025PA1] gi|313816464|gb|EFS54178.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL059PA1] gi|313828276|gb|EFS65990.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL063PA2] gi|313830204|gb|EFS67918.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL007PA1] gi|313832957|gb|EFS70671.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL056PA1] gi|314914446|gb|EFS78277.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL005PA4] gi|314917770|gb|EFS81601.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL050PA1] gi|314919504|gb|EFS83335.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL050PA3] gi|314930096|gb|EFS93927.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL067PA1] gi|314957103|gb|EFT01208.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL027PA1] gi|314957693|gb|EFT01796.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL002PA1] gi|314969861|gb|EFT13959.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL037PA1] gi|314972988|gb|EFT17084.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL053PA1] gi|314975498|gb|EFT19593.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL045PA1] gi|314984815|gb|EFT28907.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL005PA1] gi|315079958|gb|EFT51934.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL078PA1] gi|315096645|gb|EFT68621.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL038PA1] gi|315097874|gb|EFT69850.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL059PA2] gi|315100638|gb|EFT72614.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL046PA1] gi|315106178|gb|EFT78154.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL030PA1] gi|315109265|gb|EFT81241.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL030PA2] gi|327325311|gb|EGE67116.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL096PA2] gi|327443826|gb|EGE90480.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL043PA1] gi|327449138|gb|EGE95792.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL043PA2] gi|327451320|gb|EGE97974.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL087PA3] gi|327451774|gb|EGE98428.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL083PA2] gi|328752259|gb|EGF65875.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL087PA1] gi|328755356|gb|EGF68972.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL025PA2] gi|328761101|gb|EGF74650.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL099PA1] Length = 297 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 141/302 (46%), Positives = 197/302 (65%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 M+I++D+N+K++VQG+TG G HT Q +L T VVGG++P+K T G VPV+ Sbjct: 1 MAIILDQNSKIIVQGMTGSEGMKHT-QRMLDSGTAVVGGVNPRKAGTTVDFNGGTTVPVY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V +A E T AN SVI+VP A++E+IEAE+PL+VCITEG+PV D ++ Sbjct: 60 GSVKQAVEATGANVSVIFVPAKFTKSAVMEAIEAEMPLVVCITEGVPVKDTAEFFTAAQR 119 Query: 120 SS-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S +R+IGPNCPGI++P GI+P I G VG++S+SGTLTY+ +++ LG S Sbjct: 120 SGKTRIIGPNCPGIISPGKSNAGIVPADITGPGRVGLVSKSGTLTYQLMYEVRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA+++ + KP Sbjct: 178 TAIGIGGDPIIGTTHIDALQAFQDDPETDIIVMIGEIGGDAEERAAKYISEHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P R E + Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTPTETARLAHEAME 293 Query: 299 SL 300 SL Sbjct: 294 SL 295 >gi|327332325|gb|EGE74061.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL097PA1] Length = 297 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 142/302 (47%), Positives = 197/302 (65%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 M+I++D+N+K++VQG+TG G HT Q +L T VVGG++P+K T G VPV+ Sbjct: 1 MAIILDQNSKIIVQGMTGSEGMKHT-QRMLDSGTAVVGGVNPRKAGTTVDFNGGTTVPVY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA E T AN SVI+VP A++E+IEAE+PL+VCITEG+PV D ++ Sbjct: 60 GSVKEAVEATGANVSVIFVPAKFTKSAVMEAIEAEMPLVVCITEGVPVKDTAEFFTAAQR 119 Query: 120 SS-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S +R+IGPNCPGI++P GI+P I G VG++S+SGTLTY+ +++ LG S Sbjct: 120 SGKTRIIGPNCPGIISPGKSNAGIVPADITGPGRVGLVSKSGTLTYQLMYEVRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA+++ + KP Sbjct: 178 TAIGIGGDPIIGTTHIDALQAFQDDPETDIIVMIGEIGGDAEERAAKYISEHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P R E + Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTPTETARLAHEAME 293 Query: 299 SL 300 SL Sbjct: 294 SL 295 >gi|315605036|ref|ZP_07880090.1| succinyl-CoA synthetase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313315|gb|EFU61378.1| succinyl-CoA synthetase [Actinomyces sp. oral taxon 180 str. F0310] Length = 306 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 140/313 (44%), Positives = 192/313 (61%), Gaps = 21/313 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--------- 51 M+I V+ +T+V+VQG+TG G HT Q +L T VVGG +P+K T T Sbjct: 1 MTIFVNSDTRVIVQGMTGAEGRKHT-QRMLSAGTAVVGGTNPRKAGTTVTFDVVGYGPAA 59 Query: 52 -----GNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP 106 G + VPV+ TVAEA+E T ANASVI+VPP+ A A +E+I+A I IV ITEGIP Sbjct: 60 GRVADGQIEVPVYGTVAEAREATGANASVIFVPPAFAKAAALEAIDAGIETIVLITEGIP 119 Query: 107 VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 V D V + RLIGPNCPGI++P +GI P I G +G++S+SGTLTY+ Sbjct: 120 VQDSTIVVEHALAAGVRLIGPNCPGIISPGQANLGITPADITGPGRLGLVSKSGTLTYQL 179 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 +++ G +T +GIGGDPV GT ID L F D T+ ++M+GEIGG AEE AA++ Sbjct: 180 MYELRD--FGFTTCLGIGGDPVVGTTHIDALAAFEEDPDTDLVIMIGEIGGDAEERAAEW 237 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 + KP+V ++AG TAP G+TMGHAGA++SG G A K A++ G+ + +P Sbjct: 238 ISQNM----TKPVVAYIAGFTAPEGKTMGHAGAIVSGSSGTASAKAAALEAVGVRVGRTP 293 Query: 287 ARIGRSLVELLGS 299 ++ + ELL Sbjct: 294 SQTAQIARELLSR 306 >gi|313835933|gb|EFS73647.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL037PA2] gi|314927224|gb|EFS91055.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL044PA1] gi|314970657|gb|EFT14755.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL037PA3] gi|328906124|gb|EGG25899.1| succinyl-CoA synthetase, alpha subunit [Propionibacterium sp. P08] Length = 297 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 140/302 (46%), Positives = 196/302 (64%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 M+I++D+N+K++VQG+TG G HT Q +L T VVGG++P+K T G VPV+ Sbjct: 1 MAIILDQNSKIIVQGMTGSEGMKHT-QRMLDSGTAVVGGVNPRKAGTTVDFNGGTTVPVY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V E E T AN SVI+VP A++E++EAE+PL+VCITEG+PV D ++ Sbjct: 60 GSVKETVEATGANVSVIFVPAKFTKSAVMEAVEAEMPLVVCITEGVPVKDTSEFFTAAQR 119 Query: 120 SS-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S +R+IGPNCPGI++P GI+P I G VG++S+SGTLTY+ +++ LG S Sbjct: 120 SGKTRIIGPNCPGIISPGKSNAGIVPADITGPGRVGLVSKSGTLTYQLMYEVRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA+++ + KP Sbjct: 178 TAIGIGGDPIIGTTHIDALQAFQDDPETDIIVMIGEIGGDAEERAAKYISEHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P R E + Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTPTETARLAHEAMD 293 Query: 299 SL 300 SL Sbjct: 294 SL 295 >gi|171742919|ref|ZP_02918726.1| hypothetical protein BIFDEN_02036 [Bifidobacterium dentium ATCC 27678] gi|171278533|gb|EDT46194.1| hypothetical protein BIFDEN_02036 [Bifidobacterium dentium ATCC 27678] Length = 307 Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 130/311 (41%), Positives = 195/311 (62%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW------TGGNV 54 M++ ++ V+VQG+TG G HT + +L T +VGG++ +K +G + Sbjct: 1 MTLFIEDGAPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNARKAGIDVVFPDARSGEDA 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + V+ AEAKE T A ASV++VPP A DA++E+IEA I LIV ITEGIPV D Sbjct: 60 TIHVYANCAEAKEATGAKASVVFVPPRFAKDAVVEAIEAGIELIVVITEGIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGIL------TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R++GPNCPG+L + C +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALRKGVRIVGPNCPGLLTLPSNEDANGCNLGIIPDGIVSRGPLGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G GGDP+ GT + LE F DEAT+++VM+GEIGGSAE++AA++ Sbjct: 180 ELSD--IGFTACLGAGGDPIVGTTLQEALEAFENDEATKAVVMIGEIGGSAEQDAAKWAS 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK NA++ GI + +P + Sbjct: 238 EHM----TKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKNALEAVGIRVGRTPGQ 293 Query: 289 IGRSLVELLGS 299 + E+L + Sbjct: 294 TAEIMREVLAA 304 >gi|296454190|ref|YP_003661333.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium longum subsp. longum JDM301] gi|296183621|gb|ADH00503.1| succinyl-CoA synthetase, alpha subunit [Bifidobacterium longum subsp. longum JDM301] Length = 303 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 130/305 (42%), Positives = 195/305 (63%), Gaps = 15/305 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNVNV 56 + ++ V+VQG+TG G HT + +L T +VGG++P+K T T G +V++ Sbjct: 2 LFIEDGAPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNPRKAGTSVTFPGAKNGADVDI 60 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF T EA+E T A ASV++VPP A A++E++EA I LIV ITEGIPV D Sbjct: 61 PVFATCGEAREATGAKASVVFVPPKFAKSAVVEAVEAGIELIVVITEGIPVADSAYFVEL 120 Query: 117 LEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 K R+IGPNCPG +T + +GI+P I +G +G++S+SGTLTY+ + + S Sbjct: 121 ALKKGVRIIGPNCPGFITLGNPGVNLGIIPDGIVGRGPLGLVSKSGTLTYQLMGELSD-- 178 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G + +G GGDP+ GT ++ L+ F AD T++++M+GEIGG AE++AA + K+ Sbjct: 179 IGFTACLGAGGDPIVGTTLLEALQAFEADPDTKAVMMIGEIGGFAEQDAAAWAKEHM--- 235 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK NA++ AGI + +P + + Sbjct: 236 -TKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKNALEAAGIPVGKTPGQAAEIMR 294 Query: 295 ELLGS 299 ++L Sbjct: 295 DILAK 299 >gi|23335119|ref|ZP_00120357.1| COG0074: Succinyl-CoA synthetase, alpha subunit [Bifidobacterium longum DJO10A] gi|23465311|ref|NP_695914.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium longum NCC2705] gi|189439320|ref|YP_001954401.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium longum DJO10A] gi|227547253|ref|ZP_03977302.1| succinate--CoA ligase (ADP-forming) [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239621479|ref|ZP_04664510.1| succinyl-CoA ligase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|317483243|ref|ZP_07942238.1| succinate-CoA ligase [Bifidobacterium sp. 12_1_47BFAA] gi|322689203|ref|YP_004208937.1| succinyl-CoA synthase subunit alpha [Bifidobacterium longum subsp. infantis 157F] gi|322691269|ref|YP_004220839.1| succinyl-CoA synthase alpha subunit [Bifidobacterium longum subsp. longum JCM 1217] gi|23325950|gb|AAN24550.1| succinyl-CoA synthetase alpha chain [Bifidobacterium longum NCC2705] gi|189427755|gb|ACD97903.1| Succinyl-CoA synthetase alpha subunit [Bifidobacterium longum DJO10A] gi|227212212|gb|EEI80108.1| succinate--CoA ligase (ADP-forming) [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239515940|gb|EEQ55807.1| succinyl-CoA ligase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291516879|emb|CBK70495.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Bifidobacterium longum subsp. longum F8] gi|316915312|gb|EFV36739.1| succinate-CoA ligase [Bifidobacterium sp. 12_1_47BFAA] gi|320456125|dbj|BAJ66747.1| succinyl-CoA synthase alpha subunit [Bifidobacterium longum subsp. longum JCM 1217] gi|320460539|dbj|BAJ71159.1| succinyl-CoA synthase alpha subunit [Bifidobacterium longum subsp. infantis 157F] Length = 303 Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats. Identities = 129/305 (42%), Positives = 195/305 (63%), Gaps = 15/305 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNVNV 56 + ++ V+VQG+TG G HT + +L T +VGG++P+K T T G + ++ Sbjct: 2 LFIEDGAPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNPRKAGTSVTFPGAKNGADADI 60 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF T EA+E T A ASV++VPP A A++E++EA I LIV ITEGIPV D Sbjct: 61 PVFATCGEAREATGAKASVVFVPPKFAKSAVVEAVEAGIELIVVITEGIPVADSAYFVEL 120 Query: 117 LEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 K R+IGPNCPG++T + +GI+P I +G +G++S+SGTLTY+ + + S Sbjct: 121 ALKKGVRIIGPNCPGLITLGNPGVNLGIIPDGIVGRGPLGLVSKSGTLTYQLMGELSD-- 178 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G + +G GGDP+ GT ++ L+ F AD T++++M+GEIGG AE++AA + K+ Sbjct: 179 IGFTACLGAGGDPIVGTTLLEALQAFEADPDTKAVMMIGEIGGFAEQDAAAWAKEHM--- 235 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK NA++ AGI + +P + + Sbjct: 236 -TKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKNALEAAGIPVGKTPGQAAEIMR 294 Query: 295 ELLGS 299 ++L Sbjct: 295 DVLAK 299 >gi|119025827|ref|YP_909672.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium adolescentis ATCC 15703] gi|118765411|dbj|BAF39590.1| succinyl-CoA ligase [Bifidobacterium adolescentis ATCC 15703] Length = 307 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 130/311 (41%), Positives = 192/311 (61%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNV 54 M++ ++ V+VQG+TG G HT + +L T +VGG++ +K T G + Sbjct: 1 MTLFIEDGAPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNARKAGLDVTFPEAKNGEDA 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + VF +EA E T A ASV++VPP A DA++E+IEA I LIV ITEGIPV D Sbjct: 60 TIHVFANCSEAIEATGAKASVVFVPPRFAKDAVVEAIEAGIELIVVITEGIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGIL------TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R++GPNCPG+L C +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALRKGVRIVGPNCPGLLTLPSSKDAKGCNLGIIPDGIVSRGPLGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G GGDP+ GT + LE F DEAT+++VM+GEIGGSAE++AA++ Sbjct: 180 ELSD--IGFTACLGAGGDPIVGTTLQEALEAFENDEATKAVVMIGEIGGSAEQDAAKWAS 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK A++ GI + +P + Sbjct: 238 EHM----TKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKEALEAVGIRVGRTPGQ 293 Query: 289 IGRSLVELLGS 299 + E+L S Sbjct: 294 TAEIMREVLAS 304 >gi|312132694|ref|YP_004000033.1| sucd [Bifidobacterium longum subsp. longum BBMN68] gi|311773652|gb|ADQ03140.1| SucD [Bifidobacterium longum subsp. longum BBMN68] Length = 303 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 130/305 (42%), Positives = 195/305 (63%), Gaps = 15/305 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNVNV 56 + ++ V+VQG+TG G HT + +L T +VGG++P+K T T G + N+ Sbjct: 2 LFIEDGAPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNPRKAGTSVTFPGAKNGADANI 60 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF T EA+E T A ASV++VPP A A++E++EA I LIV ITEGIPV D Sbjct: 61 PVFATCGEAREATGAKASVVFVPPKFAKSAVVEAVEAGIELIVVITEGIPVADSAYFVEL 120 Query: 117 LEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 K R+IGPNCPG++T + +GI+P I +G +G++S+SGTLTY+ + + S Sbjct: 121 ALKKGVRIIGPNCPGLITLGNPGVNLGIIPDGIVGRGPLGLVSKSGTLTYQLMGELSD-- 178 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G + +G GGDP+ GT ++ L+ F AD T++++M+GEIGG AE++AA + K+ Sbjct: 179 IGFTACLGAGGDPIVGTTLLEALQAFEADPDTKAVMMIGEIGGFAEQDAAAWAKEHM--- 235 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK NA++ AGI + +P + + Sbjct: 236 -TKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKNALEAAGIPVGKTPGQAAEIMR 294 Query: 295 ELLGS 299 ++L Sbjct: 295 DVLAK 299 >gi|283456059|ref|YP_003360623.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium dentium Bd1] gi|283102693|gb|ADB09799.1| Succinyl-CoA synthetase subunit alpha [Bifidobacterium dentium Bd1] Length = 307 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 130/311 (41%), Positives = 195/311 (62%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW------TGGNV 54 M++ ++ V+VQG+TG G HT + +L T +VGG++ +K +G + Sbjct: 1 MTLFIEDGAPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNARKAGIDVVFPDARSGEDA 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + V+ AEAKE T A ASV++VPP A DA++E+IEA I LIV ITEGIPV D Sbjct: 60 TIHVYANCAEAKEATGAKASVVFVPPRFAKDAVVEAIEAGIELIVVITEGIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGIL------TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R++GPNCPG+L + C +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALRKGVRIVGPNCPGLLTLPSNEDANGCNLGIIPDGIVSRGPLGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G GGDP+ GT + LE F DEAT+++VM+GEIGGSAE++AA++ Sbjct: 180 ELSD--IGFTACLGAGGDPIVGTTLQEALEAFENDEATKAVVMIGEIGGSAEQDAAKWAS 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK NA++ GI + +P + Sbjct: 238 EHM----TKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKNALEAIGIRVGRTPGQ 293 Query: 289 IGRSLVELLGS 299 + E+L + Sbjct: 294 TAEIMREVLAA 304 >gi|123501690|ref|XP_001328129.1| hypothetical protein [Trichomonas vaginalis G3] gi|1710867|sp|P53401|SUCA3_TRIVA RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha-3, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha-3; Short=SCS-alpha-3; Flags: Precursor gi|538513|gb|AAC41560.1| succinyl CoA synthetase-3 alpha subunit [Trichomonas vaginalis] gi|121911068|gb|EAY15906.1| hypothetical protein TVAG_165340 [Trichomonas vaginalis G3] Length = 309 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 145/299 (48%), Positives = 208/299 (69%), Gaps = 8/299 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DK+TKV++QG+ G G FH+ Y T+VVG +HPKK + G +P+F + Sbjct: 15 LFIDKDTKVVIQGI-GNQGQFHSRLMRQY-GTKVVGAVHPKKAGSIIAG----LPIFKNM 68 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E +RT ANAS+I+VP GA A IE+ +A + L+VCITE IP DM++VK ++++ Sbjct: 69 KEVVKRTDANASLIFVPAPGAAAACIEAAQAGMGLVVCITEHIPQHDMIKVKKVMKETGC 128 Query: 123 RLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +LIGPNCPG++ P K+GI+P +IF G +GI+SRSGTLTYEA + T+ GLGQST V Sbjct: 129 QLIGPNCPGLIQPGTHTKLGIIPTNIFNNGKIGIVSRSGTLTYEAAYATTLAGLGQSTVV 188 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP G DV++ F AD TE I+++GEIGG++EE+AA+++ + K ++KP+V Sbjct: 189 GIGGDPFAGQLHTDVVKRFAADPQTEGIILIGEIGGTSEEDAAEWI-AKTKLTQEKPVVA 247 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPG+ MGHAGA++SGGKG AE K A++ AG+ IA P +G+ + E + + Sbjct: 248 FIAGATAPPGKRMGHAGAIVSGGKGTAEGKYKALEAAGVRIARHPGNMGKFIFEEMKRM 306 >gi|123393950|ref|XP_001300482.1| adhesin protein AP33-1 [Trichomonas vaginalis G3] gi|2290206|gb|AAC48337.1| adhesin protein AP33-1 [Trichomonas vaginalis] gi|121881529|gb|EAX87552.1| adhesin protein AP33-1 [Trichomonas vaginalis G3] Length = 309 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 147/299 (49%), Positives = 208/299 (69%), Gaps = 8/299 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DK+TKV++QG+ G G FH+ Y T+VVG +HPKK T G +P+F + Sbjct: 15 LFIDKDTKVVIQGI-GNQGQFHSRLMRQY-GTKVVGAVHPKKAGTIIAG----LPIFKNM 68 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E +RT ANAS+I+VP GA A IE+ EA + L+VCITE IP DM++VK ++++ Sbjct: 69 KEVVKRTDANASLIFVPAPGAAAACIEAAEAGMGLVVCITEHIPQHDMIKVKKVMKETGC 128 Query: 123 RLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +LIGPNCPG++ P K+GI+P +IF G +GI+SRSGTLTYEA + T+ GLGQST V Sbjct: 129 QLIGPNCPGLIQPGTHTKLGIIPTNIFNNGKIGIVSRSGTLTYEAAYATTLAGLGQSTVV 188 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP G DV++ F AD TE I+++GEIGG++EE+AA+++ + K ++KP+V Sbjct: 189 GIGGDPFAGQLHTDVVKRFAADPQTEGIILIGEIGGTSEEDAAEWI-AKTKLTQEKPVVA 247 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPG+ MGHAGA++SGGKG AE K A++ AG+ IA P +G+ + E + + Sbjct: 248 FIAGATAPPGKRMGHAGAIVSGGKGTAEGKYKALEAAGVRIARHPGNMGKFIFEEMKRM 306 >gi|315103906|gb|EFT75882.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL050PA2] Length = 297 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 141/302 (46%), Positives = 196/302 (64%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 M+I++D+N+K++VQG+TG G HT Q +L VVGG++P+K T G VPV+ Sbjct: 1 MAIILDQNSKIIVQGMTGSEGMKHT-QRMLDSGAAVVGGVNPRKAGTTVDFNGGTTVPVY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA E T AN SVI+VP A++E+IEAE+PL+VCITEG+PV D ++ Sbjct: 60 GSVKEAVEATGANVSVIFVPAKFTKSAVMEAIEAEMPLVVCITEGVPVKDTAEFFTAAQR 119 Query: 120 SS-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S +R+IGPNCPGI++P GI+P I G VG++S+SGTLTY+ +++ LG S Sbjct: 120 SGKTRIIGPNCPGIISPGKSNAGIVPADITGPGRVGLVSKSGTLTYQLMYEVRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA+++ + KP Sbjct: 178 TAIGIGGDPIIGTTHIDALQAFQDDPETDIIVMIGEIGGDAEERAAKYISEHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P R E + Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTPTETARLAHEAME 293 Query: 299 SL 300 SL Sbjct: 294 SL 295 >gi|134076925|emb|CAK45334.1| unnamed protein product [Aspergillus niger] Length = 355 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 127/300 (42%), Positives = 198/300 (66%), Gaps = 9/300 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +T+VL QG TG+ T + ++++ + T++VGG+ P G ++ +PVF + Sbjct: 41 NLKIGAHTRVLFQGFTGRQATANVKESLEW-GTKIVGGVKPG-----VEGEHLGLPVFPS 94 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A+ER +AS IYVP + AI E+IEAEIPL+V + E +P+ D++R+ + L+ +S Sbjct: 95 VKAAQERAKPDASAIYVPGNQTAKAIEEAIEAEIPLVVAVAEHVPIHDILRIHSMLKTQS 154 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+G NCPGI++ C+IG P F G++GI+++SGTL+YE V T++ GLGQS Sbjct: 155 KTRLVGANCPGIISAIGKCRIGFQPLPCFAPGNIGIVAKSGTLSYETVASTTRAGLGQSL 214 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKP 238 + +GGD + GT F+D L++F D T+ I++VGEIGG+AE +AA+++KD +R KP Sbjct: 215 CISMGGDVLAGTNFVDALKIFEDDPDTDGIILVGEIGGTAEIDAAEWIKDYNQRTANPKP 274 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I+G V G APPGR MGHAGA + G+ GA+ K A++ AG+ + P + G + LLG Sbjct: 275 IMGLVGGLHAPPGRIMGHAGAWTAIGEPGAKAKYEALERAGVVMVNHPEKFGEGMKSLLG 334 >gi|2290210|gb|AAC48339.1| adhesin protein AP33-3 [Trichomonas vaginalis] Length = 309 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 144/299 (48%), Positives = 208/299 (69%), Gaps = 8/299 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DK+TKV++QG+ G G FH+ Y T+VVG +HPKK + G +P+F + Sbjct: 15 LFIDKDTKVVIQGI-GNQGQFHSRLMRQY-GTKVVGAVHPKKAGSIIAG----LPIFKNM 68 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E +RT ANAS+I+VP GA A IE+ +A + L+VCITE IP DM++VK ++++ Sbjct: 69 KEVVKRTDANASLIFVPAPGAAAACIEAAQAGMGLVVCITEHIPQHDMIKVKKVMKETGC 128 Query: 123 RLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +LIGPNCPG++ P K+GI+P +IF G +GI+SRSGTLTYEA + T+ GLGQST V Sbjct: 129 QLIGPNCPGLIQPGTHTKLGIIPTNIFNNGKIGIVSRSGTLTYEAAYATTLAGLGQSTVV 188 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP G DV++ F AD TE I+++GEIGG++EE+AA+++ + K ++KP+V Sbjct: 189 GIGGDPFAGQLHTDVVKRFAADPQTEGIILIGEIGGTSEEDAAEWI-AKTKLTQEKPVVA 247 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 F+AG TAPPG+ MGH+GA++SGGKG AE K A++ AG+ IA P +G+ + E + + Sbjct: 248 FIAGATAPPGKRMGHSGAIVSGGKGTAEGKYKALEAAGVRIARHPGNMGKFIFEEMKRM 306 >gi|694122|gb|AAA62655.1| malate thiokinase [Methylobacterium extorquens AM1] Length = 260 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 130/261 (49%), Positives = 173/261 (66%), Gaps = 13/261 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D+ T +LVQG+TG GTFH ++ I Y + VVGG+ P KG G VPVF Sbjct: 1 MSILIDEKTPILVQGITGDKGTFHAKEMIAY-GSNVVGGVTPGKGGKTHCG----VPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E T A S+ +V P A DAI+E+ +A + L+ IT+GIP DM+RVK L + Sbjct: 56 TVKEAVEATGATTSITFVAPPFAADAIMEAADAGLKLVCSITDGIPAQDMMRVKRYLRRY 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + ++GPNC GI++P +GIMPG I+ G VG++SRSGTL YEA Q + G+G Sbjct: 116 PKEKRTMVVGPNCAGIISPGKSMLGIMPGHIYLPGKVGVISRSGTLGYEAAAQMKELGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST+VGIGGDP+ G+ F+D L LF D TE+++M+GEIGG E EA+ ++K+ Sbjct: 176 ISTSVGIGGDPINGSSFLDHLALFEQDPETEAVLMIGEIGGPQEAEASAWIKEN----FS 231 Query: 237 KPIVGFVAGKTAPPGRTMGHA 257 KP++GFVAG TAP GR MGHA Sbjct: 232 KPVIGFVAGLTAPKGRRMGHA 252 >gi|306822730|ref|ZP_07456108.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium dentium ATCC 27679] gi|309800809|ref|ZP_07694941.1| succinyl-CoA synthetase, alpha subunit [Bifidobacterium dentium JCVIHMP022] gi|304554275|gb|EFM42184.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium dentium ATCC 27679] gi|308222345|gb|EFO78625.1| succinyl-CoA synthetase, alpha subunit [Bifidobacterium dentium JCVIHMP022] Length = 307 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 130/311 (41%), Positives = 195/311 (62%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW------TGGNV 54 M++ ++ V+VQG+TG G HT + +L T +VGG++ +K +G + Sbjct: 1 MTLFIEDGAPVIVQGMTGHQGKTHTAR-MLKAGTNIVGGVNARKAGIDVVFHDARSGEDA 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + V+ AEAKE T A ASV++VPP A DA++E+IEA I LIV ITEGIPV D Sbjct: 60 TIHVYANCAEAKEATGAKASVVFVPPRFAKDAVVEAIEAGIELIVVITEGIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGIL------TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R++GPNCPG+L + C +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALRKGVRIVGPNCPGLLTLPSNEDANGCNLGIIPDGIVSRGPLGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G GGDP+ GT + LE F DEAT+++VM+GEIGGSAE++AA++ Sbjct: 180 ELSD--IGFTACLGAGGDPIVGTTLQEALEAFENDEATKAVVMIGEIGGSAEQDAARWAS 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK NA++ GI + +P + Sbjct: 238 EHM----TKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKNALEAVGIRVGRTPGQ 293 Query: 289 IGRSLVELLGS 299 + E+L + Sbjct: 294 TAEIMREVLAA 304 >gi|121701827|ref|XP_001269178.1| CoA-ligase, putative [Aspergillus clavatus NRRL 1] gi|119397321|gb|EAW07752.1| CoA-ligase, putative [Aspergillus clavatus NRRL 1] Length = 679 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 127/301 (42%), Positives = 194/301 (64%), Gaps = 9/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +T VL QG TG+ T + ++++ + T++VGG+ P G ++ +PVF + Sbjct: 37 NLKIGAHTSVLFQGFTGRQATANVKESLAW-GTKIVGGVKPG-----VEGEHLGLPVFPS 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A+ER +AS IYVP + AI E+IEAEIPL+V + E +P+ DM+RV + L+ +S Sbjct: 91 VRVAQERAKPDASAIYVPGNQTAKAIEEAIEAEIPLVVAVAEHVPIHDMLRVHSILQTQS 150 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+G NCPGI++ C+IG P F G +GI+++SGTL+YE V T++ GLGQS Sbjct: 151 KTRLVGANCPGIISAIGKCRIGFQPLPCFSPGKIGIVAKSGTLSYETVASTTRAGLGQSL 210 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKP 238 + +GGD + GT F+D L++F D TE I++VGEIGG+AE +AA+++ D + KP Sbjct: 211 CISMGGDVLAGTNFVDALKIFEEDPDTEGIILVGEIGGTAEMDAAEWITDYHRRTVNPKP 270 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I+G V G+ APPGR MGHAGA ++ G+ AE K A++ AG+ + P + G + LL Sbjct: 271 IMGLVGGREAPPGRVMGHAGAWVAPGEPDAETKYKALENAGVTMVNHPEKFGEEMKALLS 330 Query: 299 S 299 Sbjct: 331 R 331 >gi|119495818|ref|XP_001264686.1| CoA-ligase, putative [Neosartorya fischeri NRRL 181] gi|119412848|gb|EAW22789.1| CoA-ligase, putative [Neosartorya fischeri NRRL 181] Length = 629 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 122/287 (42%), Positives = 185/287 (64%), Gaps = 9/287 (3%) Query: 16 LTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASV 75 G+ T + ++++ + T++VGG+ P G ++ +PVF +V A+ER +AS Sbjct: 2 FAGRQATANVKESLAW-GTKIVGGVKPG-----VEGEHLGLPVFPSVRAAQERAKPDASA 55 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILT 134 IYVP + AI E++EAEIPL+V + E +P+ DM+RV + L+ +S +RL+G NCPGI++ Sbjct: 56 IYVPGNQTAKAIEEAVEAEIPLVVAVAEHVPIHDMLRVHSMLQTQSKTRLVGANCPGIIS 115 Query: 135 P-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 C+IG P F G VGI+++SGTL+YE V T++ GLGQS + +GGD + GT F Sbjct: 116 AIGKCRIGFQPLPCFSPGKVGIVAKSGTLSYETVASTTRAGLGQSLCISMGGDVLAGTNF 175 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPIVGFVAGKTAPPGR 252 +D L++F D TE I++VGEIGG+AE +AA++++D KR KPI+ V G+ APPGR Sbjct: 176 VDALKVFEEDPDTEGIILVGEIGGTAEIDAAEWIRDYNKRTANPKPIMALVGGQEAPPGR 235 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 MGHAGA I+ G+ A K A++ AG+ + P + G+ + LL Sbjct: 236 VMGHAGAWIAPGEPDAVAKHRALESAGVTMVDHPEKFGQGMKALLAR 282 >gi|110227027|gb|ABG56533.1| ScsA [Penicillium marneffei] Length = 266 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 156/266 (58%), Positives = 200/266 (75%), Gaps = 7/266 (2%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 T+VVGG +PKK T +++PVF TV++A + T A AS I+VPP A I E+I Sbjct: 1 GTKVVGGTNPKKAGTTH----LDLPVFATVSDAVKETGATASAIFVPPPLAAAGIEEAIA 56 Query: 93 AEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 AEIPL+VCITEGIP DMVR+ L+ + +RL+GPNCPGI+ P CKIGIMPG I ++G Sbjct: 57 AEIPLVVCITEGIPQHDMVRITDILKTQDKTRLVGPNCPGIIAPGQCKIGIMPGFIHKRG 116 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 +GI+SRSGTLTYEAV QT+Q GLGQS VGIGGDP GT FID L++FL DE T+ I+M Sbjct: 117 RIGIVSRSGTLTYEAVNQTTQAGLGQSLVVGIGGDPFSGTNFIDCLKVFLEDEETDGIIM 176 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDK 271 +GEIGGSAEE+AA+FLK E K + KP V F+AG +APPGR MGHAGA++SGGKGGA+ K Sbjct: 177 IGEIGGSAEEDAAEFLKSENK--KNKPTVSFIAGISAPPGRRMGHAGAIVSGGKGGADSK 234 Query: 272 INAMKEAGICIAPSPARIGRSLVELL 297 I+A++ AG+ + SPA +G++L + Sbjct: 235 ISALEAAGVIVERSPASLGKTLRDEF 260 >gi|154150269|ref|YP_001403887.1| succinyl-CoA synthetase, alpha subunit [Candidatus Methanoregula boonei 6A8] gi|153998821|gb|ABS55244.1| succinyl-CoA synthetase, alpha subunit [Methanoregula boonei 6A8] Length = 292 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 129/299 (43%), Positives = 181/299 (60%), Gaps = 16/299 (5%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ----TQVVGGIHPKKGSTYWTGGNVNVPV 58 I DK T ++V G TGK G +H Y + VV G+ PKK G VPV Sbjct: 2 IYGDKKTGIIVTGATGKQGDYHIGLMNEYARQVGGRGVVAGVTPKKAGQSVHG----VPV 57 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TV +A + A ASVI+VP AGD+I+E +A + L V ITE IPV D ++ A E Sbjct: 58 YDTVKDALKEHDATASVIFVPAKAAGDSIMEVADAGLELAVVITEHIPVHDTMKAIAYAE 117 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R+IGPNCPG+L+P K+GIMP S+F +G VG++SRSGTLTYE V + ++ G+GQS Sbjct: 118 MEGCRVIGPNCPGLLSPGEVKMGIMPASLFSRGHVGVISRSGTLTYEVVDELTRAGIGQS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T +GIGGDPV G F + L F D+ T+++V++GE+GG+ E E A+ P Sbjct: 178 TVIGIGGDPVIGQTFENALAQFAEDKETKAVVLIGEVGGNLEAEGAR--------NTDVP 229 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +V ++AG +APP + MGHAGA++ GG+ A KI +K+ I +A P+ I + +L Sbjct: 230 LVAYIAGISAPPDKRMGHAGAIVEGGESDARSKIAKLKKMNIPVASRPSEIPDLIRDLF 288 >gi|282855096|ref|ZP_06264428.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes J139] gi|282581684|gb|EFB87069.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes J139] gi|314982170|gb|EFT26263.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL110PA3] gi|315090401|gb|EFT62377.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL110PA4] Length = 297 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 141/302 (46%), Positives = 196/302 (64%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 M+I++D+N+K++VQG+TG G HT Q +L VVGG++P+K T G VPV+ Sbjct: 1 MAIILDQNSKIIVQGMTGSEGMKHT-QRMLDSGAAVVGGVNPRKAGTTVDFNGGTTVPVY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA E T AN SVI+VP A++E+IEAE+PL+VCITEG+PV D ++ Sbjct: 60 GSVKEAIEATGANVSVIFVPAKFTKSAVMEAIEAEMPLVVCITEGVPVKDTAEFFTAAQR 119 Query: 120 SS-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S +R+IGPNCPGI++P GI+P I G VG++S+SGTLTY+ +++ LG S Sbjct: 120 SGKTRIIGPNCPGIISPGKSNAGIVPADITGPGRVGLVSKSGTLTYQLMYEVRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA+++ + KP Sbjct: 178 TAIGIGGDPIIGTTHIDALQAFQDDPETDIIVMIGEIGGDAEERAAKYISEHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P R E + Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTPTETARLAHEAME 293 Query: 299 SL 300 SL Sbjct: 294 SL 295 >gi|167043823|gb|ABZ08513.1| putative CoA-binding domain protein [uncultured marine crenarchaeote HF4000_APKG3D24] Length = 305 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 117/289 (40%), Positives = 171/289 (59%), Gaps = 7/289 (2%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V+VQG+TGK GT HT+ I Y T +V G+ P KG + +VP++ T+ +A ++T Sbjct: 23 VIVQGITGKYGTRHTKLMIEY-GTNIVAGVTPGKGGQKF---ENSVPIYETIKKAVDKTG 78 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 A S+++VP A +++EA I L+V I E +PV D +++ ++ + +IGPN P Sbjct: 79 AKISIMFVPAKFFLGAAKDALEAGIKLLVAIPEHVPVQDTMKIVELAKQKDAIVIGPNTP 138 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G++ P+ KIGIMP S F+ G++ +LS+SGTL YE S G GQ +GIGGDP+ G Sbjct: 139 GVMIPELIKIGIMPASPFKFGNIVVLSKSGTLLYEICNNLSNSGFGQCITIGIGGDPING 198 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 T ID L++ E IV+VGEIGG EE AQ + DE KP+V ++AG++AP Sbjct: 199 TRLIDALDMVKDYPDLEGIVVVGEIGGDGEEVLAQKIIDEN---FNKPVVAYIAGRSAPK 255 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 + MGHAGA++ G G AE KI +A I +A P + L + Sbjct: 256 EKIMGHAGAIVMGNYGSAESKIAMFSKANIPVAKRPIEVPVLLAGKMEK 304 >gi|224149849|ref|XP_002336874.1| predicted protein [Populus trichocarpa] gi|222837041|gb|EEE75420.1| predicted protein [Populus trichocarpa] Length = 208 Score = 246 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 134/211 (63%), Positives = 160/211 (75%), Gaps = 6/211 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF T Sbjct: 3 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNT 57 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DMVRVKA L ++ Sbjct: 58 VAEAKAETKANASVIYVPPPFAAAAILEAMEAELNLVVCITEGIPQHDMVRVKAALNRQT 117 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RLIGPNCPGI+ P CKIGIMP I + G +GI+SRSGTLTYEAVFQT+ GLGQST Sbjct: 118 KTRLIGPNCPGIIKPGECKIGIMPAYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTC 177 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVM 211 VGIGGDP GT F+D +E FL D TE ++ Sbjct: 178 VGIGGDPFNGTNFVDCIEKFLVDPQTEGKLL 208 >gi|213692044|ref|YP_002322630.1| succinyl-CoA synthetase, alpha subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523505|gb|ACJ52252.1| succinyl-CoA synthetase, alpha subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320458156|dbj|BAJ68777.1| succinyl-CoA synthase alpha subunit [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 303 Score = 246 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 126/305 (41%), Positives = 194/305 (63%), Gaps = 15/305 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW------TGGNVNV 56 + ++ V+VQG+TG G HT + +L T +VGG++P+K + G + ++ Sbjct: 2 LFIEDGAPVIVQGMTGHQGMTHTAR-MLNAGTNIVGGVNPRKAGMHVTFPGAQGGADADI 60 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF T A+A+E T A ASV++VPP A A++E++EA I LIV ITEGIPV D Sbjct: 61 PVFATCADAREATGAKASVVFVPPKFAKSAVVEAVEAGIELIVVITEGIPVADSSYFVEL 120 Query: 117 LEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 R+IGPNCPG++T + +GI+P I +G +G++S+SGTLTY+ + + S Sbjct: 121 ALTRGVRIIGPNCPGLITLGNPGVNLGIIPDGIVGRGPLGLVSKSGTLTYQLMGELSD-- 178 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G + +G GGDP+ GT ++ L+ F AD T++++M+GEIGG AE++AA + K+ Sbjct: 179 IGFTGCLGAGGDPIVGTTLLEALQAFEADPDTKAVMMIGEIGGFAEQDAAAWAKEHM--- 235 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK NA++ AGI + +P + + Sbjct: 236 -TKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKNALEAAGIPVGKTPGQAAEIMR 294 Query: 295 ELLGS 299 ++L Sbjct: 295 DILAK 299 >gi|1710865|sp|P53399|SUCA1_TRIVA RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit alpha-1, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha-1; Short=SCS-alpha-1; Flags: Precursor gi|538509|gb|AAC41558.1| succinyl CoA synthetase-1 alpha subunit [Trichomonas vaginalis] Length = 309 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 146/299 (48%), Positives = 207/299 (69%), Gaps = 8/299 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +DK+TKV++QG+ G G FH+ Y T+VVG +HPKK T G +P+F + Sbjct: 15 LFIDKDTKVVIQGI-GNQGQFHSRLMRQY-GTKVVGAVHPKKAGTIIAG----LPIFKNM 68 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 E +RT ANAS+I+VP GA A IE+ EA + L+VCITE IP DM++VK ++++ Sbjct: 69 KEVVKRTDANASLIFVPAPGAAAACIEAAEAGMGLVVCITEHIPQHDMIKVKKVMKETGC 128 Query: 123 RLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +LIGPNCPG++ P K+GI+P +IF G +GI+SRSGTLTYEA + T+ GLGQST V Sbjct: 129 QLIGPNCPGLIQPGTHTKLGIIPTNIFNNGKIGIVSRSGTLTYEAAYATTLAGLGQSTVV 188 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP G DV++ F AD TE I+++GEIGG++EE+AA+++ + K ++KP+V Sbjct: 189 GIGGDPFAGQLHTDVVKRFAADPQTEGIILIGEIGGTSEEDAAEWI-AKTKLTQEKPVVA 247 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 +AG TAPPG+ MGHAGA++SGGKG AE K A++ AG+ IA P +G+ + E + + Sbjct: 248 SIAGATAPPGKRMGHAGAIVSGGKGTAEGKYKALEAAGVRIARHPGNMGKFIFEEMKRM 306 >gi|310287475|ref|YP_003938733.1| Succinyl-CoA synthetase alpha chain [Bifidobacterium bifidum S17] gi|309251411|gb|ADO53159.1| Succinyl-CoA synthetase alpha chain [Bifidobacterium bifidum S17] Length = 308 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 131/311 (42%), Positives = 196/311 (63%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNV 54 M+ + + V+VQG+TG G HT + +L T +VGG++P+K + T G +V Sbjct: 1 MTAFIQEGAPVIVQGMTGHQGMTHTAR-MLRAGTNIVGGVNPRKAGSQVTFEAAREGRDV 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 +VPV+ T AEAKE T A ASV++VPP A A++E++EA I LIV ITEGIPV D Sbjct: 60 SVPVYATCAEAKEATGAQASVVFVPPRFAKGAVVEAVEAGIGLIVVITEGIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGILTP------DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R+IGPNCPG+LT +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALQRGVRIIGPNCPGLLTLPSQENEHGVNLGIIPDGIVGRGPIGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G+GGDP+ GT ++ L+ F D T+++VM+GEIGGSAE++AA + Sbjct: 180 ELSD--IGFTACLGVGGDPIVGTTLLEALQEFEQDADTKAVVMIGEIGGSAEQDAAAWAA 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK A++ AGI + +P + Sbjct: 238 EHM----TKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKIALEAAGIPVGRTPGQ 293 Query: 289 IGRSLVELLGS 299 + ++L Sbjct: 294 TADLMRKVLAE 304 >gi|229817639|ref|ZP_04447921.1| hypothetical protein BIFANG_02909 [Bifidobacterium angulatum DSM 20098] gi|229785428|gb|EEP21542.1| hypothetical protein BIFANG_02909 [Bifidobacterium angulatum DSM 20098] Length = 306 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 125/312 (40%), Positives = 197/312 (63%), Gaps = 19/312 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNV 54 M++ ++ + V+VQG+TG G HT + +L T +VGG++ +K T G + Sbjct: 1 MALFIEDDAPVIVQGITGHQGMVHTAR-MLKAGTNIVGGVNARKAGLDVTYPAARNGEDA 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + VF + AEAK T A ASV++VPP A DA++E+IEA I LIV ITEGIPV D Sbjct: 60 TIHVFASCAEAKAATGAVASVVFVPPRFAKDAVVEAIEAGIKLIVVITEGIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGIL------TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ R++GPNCPG++ +GI+P I ++G +G++S+SGTLTY+ + Sbjct: 120 ELALRNGVRIVGPNCPGLVTFASSEQTHGVNLGIIPDGIVKRGPLGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G GGDP+ GT ++ L+ F ADE T++++M+GEIGG+AE++AAQ+ Sbjct: 180 ELSD--IGFTACLGAGGDPIVGTTLVEALQAFEADENTKAVMMIGEIGGNAEQDAAQWAS 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK A++ GI + +PA+ Sbjct: 238 EHM----TKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKEALEAVGIKVGRTPAQ 293 Query: 289 IGRSLVELLGSL 300 + + + ++ Sbjct: 294 AADFMRKAIAAI 305 >gi|314924239|gb|EFS88070.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL001PA1] gi|314964913|gb|EFT09012.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL082PA2] gi|315093787|gb|EFT65763.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL060PA1] gi|327325606|gb|EGE67405.1| succinyl-CoA synthetase subunit alpha [Propionibacterium acnes HL103PA1] Length = 297 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 140/302 (46%), Positives = 195/302 (64%), Gaps = 9/302 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVF 59 M+I++D+N+K++VQG+TG G HT Q +L VVGG++P+K G VPV+ Sbjct: 1 MAIILDQNSKIIVQGMTGSEGMKHT-QRMLDSGAAVVGGVNPRKAGATVDFNGGTTVPVY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +V EA E T AN SVI+VP A++E+IEAE+PL+VCITEG+PV D ++ Sbjct: 60 GSVKEAVEATGANVSVIFVPAKFTKSAVMEAIEAEMPLVVCITEGVPVKDTAEFFTAAQR 119 Query: 120 SS-SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 S +R+IGPNCPGI++P GI+P I G VG++S+SGTLTY+ +++ LG S Sbjct: 120 SGKTRIIGPNCPGIISPGKSNAGIVPADITGPGRVGLVSKSGTLTYQLMYEVRD--LGIS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 TA+GIGGDP+ GT ID L+ F D T+ IVM+GEIGG AEE AA+++ + KP Sbjct: 178 TAIGIGGDPIIGTTHIDALQAFQDDPETDIIVMIGEIGGDAEERAAKYISEHI----TKP 233 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +VAG TAP G+TMGHAGA++SG G A K A++ G+ + +P R E + Sbjct: 234 VVAYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAVGVRVGKTPTETARLAHEAME 293 Query: 299 SL 300 SL Sbjct: 294 SL 295 >gi|167044264|gb|ABZ08944.1| putative CoA-binding domain protein [uncultured marine crenarchaeote HF4000_APKG5N21] Length = 305 Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats. Identities = 117/284 (41%), Positives = 171/284 (60%), Gaps = 7/284 (2%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V+VQG+TGK GT HT+ I Y T +V G+ P KG + +VP++ T+ EA ++T Sbjct: 23 VIVQGITGKYGTRHTKLMIEY-GTNIVAGVTPGKGGQKF---ENSVPIYETIKEAVDKTG 78 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 A S+++VP A +++EA I L+V I E +PV D +++ ++ + +IGPN P Sbjct: 79 AKISIMFVPAKFFLGAAKDALEAGIKLLVAIPEHVPVQDAMKIVELAKQKDAIVIGPNTP 138 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G++ P+ KIGIMP S F+ G++ +LS+SGTL YE S G GQ +G+GGDP+ G Sbjct: 139 GVMIPELIKIGIMPASPFKFGNIVVLSKSGTLLYEICNNLSNSGFGQCITIGVGGDPING 198 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 T D L++ E IV+VGEIGG AEE AQ + DE KP+V ++AG++AP Sbjct: 199 TRLTDALDMVKDYPDLEGIVVVGEIGGDAEEVLAQKIIDEN---FNKPVVAYIAGRSAPK 255 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 + MGHAGA++ G G AE KI+ +A I +A P + L Sbjct: 256 EKIMGHAGAIVMGNYGSAESKISMFSKANIPVAKRPIEVPVLLA 299 >gi|224283107|ref|ZP_03646429.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium bifidum NCIMB 41171] gi|313140256|ref|ZP_07802449.1| succinyl-CoA synthetase alpha chain protein [Bifidobacterium bifidum NCIMB 41171] gi|313132766|gb|EFR50383.1| succinyl-CoA synthetase alpha chain protein [Bifidobacterium bifidum NCIMB 41171] Length = 308 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 131/311 (42%), Positives = 196/311 (63%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNV 54 M+ + + V+VQG+TG G HT + +L T +VGG++P+K + T G +V Sbjct: 1 MTAFIQEGAPVIVQGMTGHQGMTHTAR-MLRAGTNIVGGVNPRKAGSQVTFEAAREGRDV 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 +VPV+ T AEAKE T A ASV++VPP A A++E++EA I LIV ITEGIPV D Sbjct: 60 SVPVYATCAEAKEATGAQASVVFVPPRFAKGAVVEAVEAGIGLIVVITEGIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGILTP------DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R+IGPNCPG+LT +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALQRGVRIIGPNCPGLLTLPSQENEHGVNLGIIPDGIVGRGPIGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G+GGDP+ GT ++ L+ F D T+++VM+GEIGGSAE++AA + Sbjct: 180 ELSD--IGFTACLGVGGDPLVGTTLLEALQEFEQDADTKAVVMIGEIGGSAEQDAAAWAA 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK A++ AGI + +P + Sbjct: 238 EHM----TKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKIALEAAGIPVGRTPGQ 293 Query: 289 IGRSLVELLGS 299 + ++L Sbjct: 294 TADLMRKVLAE 304 >gi|83589267|ref|YP_429276.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Moorella thermoacetica ATCC 39073] gi|83572181|gb|ABC18733.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Moorella thermoacetica ATCC 39073] Length = 298 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 163/306 (53%), Gaps = 15/306 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M IL+D+NT V+VQG+TG+ G+ Y T+VV G P KG G +PV+ Sbjct: 1 MGILIDRNTTVVVQGITGREGSLRAAYMKEY-GTKVVAGTSPGKGGQTVAG----IPVYH 55 Query: 61 TVAEAKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EA + SVI+VP A+ E+ +A I IV E +P+ D++ + A + Sbjct: 56 TVKEAVAEHGPIDFSVIFVPGRALKVAVKEAADAGIKNIVPCVESVPIHDIMEMVAYCKM 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGI------MPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +RLIGP GI+TP +G + F+ G +G+ SRSG + + + Sbjct: 116 KGTRLIGPGSIGIITPGEAVVGWLGGNVEWANTFFKPGPIGVFSRSGGQSGTIPWVLKEG 175 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G G ST V G +PV GT D+L LF AD T+ + + EIGGS EEE A+ + A Sbjct: 176 GFGVSTVVHTGTEPVLGTSMADLLPLFEADPQTKGVAVFSEIGGSQEEECAEVI---ASG 232 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP V +VAG AP G+ HA +++ G+G A+ K+ A+++AG +A SP I R L Sbjct: 233 KFTKPFVIYVAGAWAPEGQRFSHASSIVERGRGSAKSKMEAIRKAGGYVAMSPTDIPRIL 292 Query: 294 VELLGS 299 E++ Sbjct: 293 REVIKD 298 >gi|329765515|ref|ZP_08257091.1| Succinyl-CoA synthetase-like protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137953|gb|EGG42213.1| Succinyl-CoA synthetase-like protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 305 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 119/288 (41%), Positives = 166/288 (57%), Gaps = 7/288 (2%) Query: 7 KNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 K V+VQG+TG G+ H + I Y T +V G+ P KG + VP++ TV EA Sbjct: 18 KKKGVIVQGITGAYGSLHAKNMITY-GTNIVAGVTPGKGGQKFEDK---VPIYNTVKEAV 73 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + T A S+++VP A E++EA I L+V I E +PV D + V K + +IG Sbjct: 74 DATGAKISIVFVPAKFFLGAAKEALEAGIKLLVAIPEHVPVRDTMEVLDLATKKGAVIIG 133 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN PGI+ P+ KIGIMP F+ G + +LS+SGTL YE + G GQS +GIGGD Sbjct: 134 PNTPGIMIPELIKIGIMPAMPFKAGKIAVLSKSGTLLYEISDALTNAGFGQSITIGIGGD 193 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P+ GT ID E+ E +V+VGEIGG +EE AQ + D G KKP V ++AG+ Sbjct: 194 PINGTRMIDAFEMVKDIPDLEGLVVVGEIGGDSEEILAQRIID---IGFKKPTVAYIAGR 250 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 AP + MGHAGA++ G G AE K++ +A I +A P+++ L Sbjct: 251 AAPKEKRMGHAGAIVMGTYGSAESKVSMFNKANIPVAKRPSQVPVLLA 298 >gi|255937433|ref|XP_002559743.1| Pc13g13290 [Penicillium chrysogenum Wisconsin 54-1255] gi|211584363|emb|CAP92398.1| Pc13g13290 [Penicillium chrysogenum Wisconsin 54-1255] Length = 676 Score = 244 bits (624), Expect = 8e-63, Method: Composition-based stats. Identities = 123/301 (40%), Positives = 190/301 (63%), Gaps = 9/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +T+VL QG TG+ T + ++++ + T++VGG+ P G ++ +PVF + Sbjct: 36 NLKIGAHTRVLFQGFTGRQATANAKESLEW-GTRIVGGVKPG-----VEGEHLGLPVFPS 89 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A++R +AS IYVP + AI E+IEAEIPL+V + E +P+ D++R+ + L+ +S Sbjct: 90 VKAAQDRAKPDASAIYVPGNQTAKAIEEAIEAEIPLVVAVAEHVPIHDILRIHSMLQTQS 149 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+G NCPGI++ C+IG P F G VGI+++SGTL+YE V T++ GLGQS Sbjct: 150 KTRLVGANCPGIISAIGKCRIGFQPLPCFAPGDVGIVAKSGTLSYETVASTTRAGLGQSL 209 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKP 238 + +GGD + GT F+D L LF D T I++VGE+GG+AE +AA+++KD +R KP Sbjct: 210 CISMGGDVLAGTNFVDALNLFENDPDTRGIILVGEVGGTAEMDAAEWIKDYRRRTVDPKP 269 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I+ V G APPGR MGHAGA + G+ A K A++ AG + P + G + L Sbjct: 270 IMALVGGLEAPPGRIMGHAGAWAAPGEPDAHTKYQALERAGAVMVNHPEKFGEGMKTLFA 329 Query: 299 S 299 + Sbjct: 330 N 330 >gi|154487340|ref|ZP_02028747.1| hypothetical protein BIFADO_01190 [Bifidobacterium adolescentis L2-32] gi|154083858|gb|EDN82903.1| hypothetical protein BIFADO_01190 [Bifidobacterium adolescentis L2-32] Length = 307 Score = 244 bits (624), Expect = 8e-63, Method: Composition-based stats. Identities = 128/311 (41%), Positives = 190/311 (61%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNV 54 M++ ++ V+VQG+TG G HT + +L T +VGG++ +K T G + Sbjct: 1 MTLFIEDGAPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNARKAGLDVTFPEAKNGEDA 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + VF +EA E T A ASV++VPP A DA++E+IEA I LIV I E IPV D Sbjct: 60 TIHVFANCSEAIEATGAKASVVFVPPRFAKDAVVEAIEAGIELIVVIAESIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGIL------TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R++GPNCPG+L C +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALRKGVRIVGPNCPGLLTLPSSKDAKGCNLGIIPDGIVSRGPLGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G GGDP+ GT + LE F DEAT+++VM+GEIGGSAE++AA++ Sbjct: 180 ELSD--IGFTACLGAGGDPIVGTTLQEALEAFENDEATKAVVMIGEIGGSAEQDAAKWAS 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK A++ GI + +P + Sbjct: 238 EHM----TKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKEALEAVGIRVGRTPGQ 293 Query: 289 IGRSLVELLGS 299 + E+L S Sbjct: 294 TAEIMREVLAS 304 >gi|89894671|ref|YP_518158.1| hypothetical protein DSY1925 [Desulfitobacterium hafniense Y51] gi|219669111|ref|YP_002459546.1| CoA-binding protein [Desulfitobacterium hafniense DCB-2] gi|89334119|dbj|BAE83714.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539371|gb|ACL21110.1| CoA-binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 298 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 159/306 (51%), Gaps = 15/306 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M IL++K TKV+VQG+TG+ G+ T+ Y T ++GG P K G VPVF Sbjct: 1 MGILINKETKVVVQGITGREGSVRTKYMKDY-GTNLIGGTSPGKMGQEVHG----VPVFN 55 Query: 61 TVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV E E+ + SVI+VP S A++E+ +A + I+ EG P+ D++ + A + Sbjct: 56 TVKEIVREQGDIDFSVIFVPGSALKTAVMEAADAGVKNIIPCVEGTPIHDIMEMIAYAKG 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGI------MPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 SRLIGP GILTP +G F+KG +G+ SRSG + + + Sbjct: 116 KGSRLIGPGSIGILTPGEAVVGWLGGNVEWANKFFQKGHIGVFSRSGGQSGTIPWVLREG 175 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G G ST + G +PV GT D+L F D T + + EIGG+ EEE A+ + Sbjct: 176 GFGVSTVIHTGTEPVLGTSMADLLPFFEEDPDTHGVAVYAEIGGTQEEECAEVIAA---G 232 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP V +VAG AP G+ HA ++ G+G A+ K+ A+ +AG +A P I L Sbjct: 233 KFTKPFVIYVAGAWAPEGQRFSHASNIVERGRGSAKSKMEAITKAGGFVAERPTDIPLIL 292 Query: 294 VELLGS 299 E LG Sbjct: 293 KEKLGK 298 >gi|212542507|ref|XP_002151408.1| succinyl-CoA synthetase subunit alpha, putative [Penicillium marneffei ATCC 18224] gi|210066315|gb|EEA20408.1| succinyl-CoA synthetase subunit alpha, putative [Penicillium marneffei ATCC 18224] Length = 676 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 126/301 (41%), Positives = 196/301 (65%), Gaps = 9/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +TKVL QG TG+ T + ++++ + T++VGG+ P G ++ +P+F + Sbjct: 38 NLKIGAHTKVLYQGFTGRQATANAKESLEW-GTKIVGGVKPG-----VEGEHLGLPIFPS 91 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V AKE++ +AS IYVP AI E+IEAEIPL+V + E +PV DM+R+ + L+ +S Sbjct: 92 VRVAKEKSNPDASAIYVPGDQTAQAIEEAIEAEIPLVVAVAEHVPVHDMLRIHSILQTQS 151 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+G NCPGI++ C+IG P F G +G++++SGTL+YEAV ++ GLGQS Sbjct: 152 KTRLVGANCPGIISAVGKCRIGFQPLPCFAPGRIGVVAKSGTLSYEAVGSLTRAGLGQSL 211 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKP 238 +G+GGD + GT FID +++F D T+ IV+VGEIGG+AE +AA+++KD + KP Sbjct: 212 CIGMGGDVLAGTNFIDAMKIFENDLDTDGIVLVGEIGGTAEMDAAEWIKDYHKRTADPKP 271 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I+ V G AP GR MGHAGA ++ G+ A K A+++AG+ + P + G + LLG Sbjct: 272 IMALVGGLEAPKGRVMGHAGAWVAPGEPDARAKYVALQKAGVNLVSHPEKFGPGMKTLLG 331 Query: 299 S 299 + Sbjct: 332 N 332 >gi|311064390|ref|YP_003971115.1| succinyl-CoA synthetase subunit alpha [Bifidobacterium bifidum PRL2010] gi|310866709|gb|ADP36078.1| SucD Succinyl-CoA synthetase alpha chain [Bifidobacterium bifidum PRL2010] Length = 308 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 131/311 (42%), Positives = 196/311 (63%), Gaps = 19/311 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWT------GGNV 54 M+ + + V+VQG+TG G HT + +L T +VGG++P+K + T G +V Sbjct: 1 MTAFIKEGAPVIVQGMTGHQGMTHTAR-MLRAGTNIVGGVNPRKAGSQVTFEAAREGRDV 59 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 +VPV+ T AEAKE T A ASV++VPP A A++E++EA I LIV ITEGIPV D Sbjct: 60 SVPVYATCAEAKEATGAQASVVFVPPRFAKGAVVEAVEAGIGLIVVITEGIPVADSAYFV 119 Query: 115 ARLEKSSSRLIGPNCPGILTP------DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R+IGPNCPG+LT +GI+P I +G +G++S+SGTLTY+ + Sbjct: 120 ELALQRGVRIIGPNCPGLLTLPSQENEHGVNLGIIPDGIVGRGPIGLVSKSGTLTYQLMG 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G+GGDP+ GT ++ L+ F D T+++VM+GEIGGSAE++AA + Sbjct: 180 ELSD--IGFTACLGVGGDPIVGTTLLEALQEFEQDADTKAVVMIGEIGGSAEQDAAAWAA 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK A++ AGI + +P + Sbjct: 238 EHM----TKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKIALEVAGIPVGRTPGQ 293 Query: 289 IGRSLVELLGS 299 + ++L Sbjct: 294 TADLMRKVLAE 304 >gi|317485056|ref|ZP_07943938.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6] gi|316923591|gb|EFV44795.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6] Length = 298 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 109/306 (35%), Positives = 164/306 (53%), Gaps = 15/306 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M IL++KNTKV+VQG+TG+ G+ T+ Y T VVGG P K + G VPV+ Sbjct: 1 MGILINKNTKVVVQGITGREGSVRTKYMKSY-GTHVVGGTSPGKKGSDVHG----VPVYN 55 Query: 61 TVAEAKERTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV E + SVI+VP A++E+ +A + ++ EG P+ D++ + A + Sbjct: 56 TVKEIAREHGEIDFSVIFVPGHVLKTAVMEAADAGVKNVIPCVEGTPIHDIMEMIAYCKA 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGI------MPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +RL+GP GI+TP +G + F++GS+G+ SRSG + + + Sbjct: 116 KGTRLLGPGSIGIITPGEAVVGWLGGNVEWANTFFKRGSIGVFSRSGGQSGTIPWVLREG 175 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G G ST + G +PV GT D+L LF D TE + + EIGGS EEE A+ + A Sbjct: 176 GFGVSTVIHTGTEPVLGTSMADLLPLFEEDPETEGVAVYAEIGGSQEEECAEVI---ASG 232 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP V +V+G AP G+ HA ++ G+G A+ K++A+ +AG +A +P I L Sbjct: 233 KFTKPFVVYVSGAWAPEGQRFSHASNIVERGRGSAKSKMDAITKAGGYVAMTPTDIPVIL 292 Query: 294 VELLGS 299 E L Sbjct: 293 HEKLKK 298 >gi|171185916|ref|YP_001794835.1| succinyl-CoA synthetase, alpha subunit [Thermoproteus neutrophilus V24Sta] gi|170935128|gb|ACB40389.1| succinyl-CoA synthetase, alpha subunit [Thermoproteus neutrophilus V24Sta] Length = 292 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 130/300 (43%), Positives = 186/300 (62%), Gaps = 10/300 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LV T+V+VQG TG+ G+FH ++ + Y T++V G+ P KG G VPV+ Sbjct: 1 MTVLVGPTTRVVVQGATGREGSFHLQRMMEY-GTKIVAGVTPGKGGASVHG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA R ANASVI+VP A +A++E+++A + L+V ITE IPV D +R Sbjct: 56 TVEEAVRRHGANASVIFVPARAAAEAVLEAVDAGVELVVVITEHIPVHDALRAINYARSR 115 Query: 121 SSRLIGPNCPGILTPD-SCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPG++ P K+GIMP SI++ G V ++SRSGTLTYE +Q + G G + Sbjct: 116 GVTVIGPNCPGVVAPPVRTKLGIMPNSIYQTPGKVAVVSRSGTLTYEISYQLVRAGFGIN 175 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 AVG+GGDPV G + ++ D IV++GE+GG AEE A+ + KP Sbjct: 176 IAVGVGGDPVVGLDLMEATLKVAEDPDVRGIVVIGEVGGDAEERLAKLYAE---GAINKP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V ++AG+TAPPG+ MGHAGA++ G G A KI A K AG+ +A +P + + L +LL Sbjct: 233 VVAYIAGRTAPPGKRMGHAGAIVMMGSGDARGKIEAFKAAGVPVAETPFEVPKLLSKLLK 292 >gi|327293844|ref|XP_003231618.1| succinyl-CoA synthetase subunit alpha [Trichophyton rubrum CBS 118892] gi|326466246|gb|EGD91699.1| succinyl-CoA synthetase subunit alpha [Trichophyton rubrum CBS 118892] Length = 689 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 125/300 (41%), Positives = 188/300 (62%), Gaps = 12/300 (4%) Query: 5 VDKNTKVLVQGLTGK---AGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 + T+VL QG TG T + ++++ + T++VGG+ P G ++ +P+F + Sbjct: 52 IGSRTRVLFQGFTGTNEAQATANVKESLAW-GTKIVGGVKPG-----VEGEHLGLPIFPS 105 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A+E+ +AS +YVP S AI E++EA IPLIV + E +P+ DM+R+ + L+ +S Sbjct: 106 VRVAQEKAKPDASAVYVPGSQTAKAIEEALEANIPLIVAVAEHVPIHDMLRIHSMLKTQS 165 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SRL+GPNCPGI++ C+IG P F G+VGI+++SGTL YE V T++ GLGQS Sbjct: 166 KSRLVGPNCPGIISAIGKCRIGFQPLQCFAPGNVGIIAKSGTLGYETVASTTRAGLGQSL 225 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKP 238 +G+GGD + GT+F+D L++F D T I++VGEIGG AE EAA+++K + KP Sbjct: 226 CIGMGGDVLAGTDFVDALKVFEHDNDTHGIIIVGEIGGEAEMEAAEWIKGYRGRTSEAKP 285 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I+ + G APPGR MGHAGA + G+ A KI A++ AG+ + P + G + LL Sbjct: 286 IMALIGGIEAPPGRVMGHAGAWTASGEPDARTKIQALQSAGVAMVDHPEKFGEGMKALLA 345 >gi|325290301|ref|YP_004266482.1| Succinate--CoA ligase (ADP-forming) [Syntrophobotulus glycolicus DSM 8271] gi|324965702|gb|ADY56481.1| Succinate--CoA ligase (ADP-forming) [Syntrophobotulus glycolicus DSM 8271] Length = 297 Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 167/305 (54%), Gaps = 15/305 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M IL++KNTKV++QG+TG+ G+ T+ Y T+V+GG P K G +PV+ Sbjct: 1 MGILINKNTKVIIQGITGREGSVRTKYMKDY-GTKVIGGTSPGKKGEEVHG----IPVYN 55 Query: 61 TVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV E ++ + SV++VP SG A+ E+++A + ++ EG PV D++ + A +++ Sbjct: 56 TVKEIVRDQGEIDFSVVFVPGSGLKTAVFEAVDAGVKNVIPCVEGTPVHDIMEMVAYVKQ 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGI------MPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +RL+GP GI+TP +G F+ G++G+ SRSG + + + Sbjct: 116 KGARLVGPGSIGIITPGEAVVGWLGGNVDWANKFFQSGNIGVFSRSGGQSGTIPWVLREG 175 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G G ST V G +PV GT D+L LF AD TE + + EIGGS EEE A+ + Sbjct: 176 GFGVSTVVHTGTEPVLGTSMADLLPLFEADPQTEGVAVYAEIGGSQEEECAEVIAA---G 232 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KP V +VAG AP G+ HA ++ G+G A+ K+ A+ AG +A +P I + L Sbjct: 233 KFTKPFVIYVAGAWAPEGQRFSHASNIVERGRGSAKSKMEAVTAAGGFVADTPTDIPKIL 292 Query: 294 VELLG 298 + L Sbjct: 293 KQKLK 297 >gi|161528632|ref|YP_001582458.1| CoA-binding domain-containing protein [Nitrosopumilus maritimus SCM1] gi|160339933|gb|ABX13020.1| CoA-binding domain protein [Nitrosopumilus maritimus SCM1] Length = 305 Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 114/289 (39%), Positives = 163/289 (56%), Gaps = 7/289 (2%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V+VQG+TG G+ H I Y T VV G+ P KG + VP++ ++ EA + T Sbjct: 22 VIVQGITGAYGSLHARNMIAY-GTNVVAGVTPGKGGQKFDDK---VPIYNSMQEAVDATN 77 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 A S+++VP A +++EA I L+V I E +PV D + ++ + +IGPN P Sbjct: 78 AKISIVFVPAKFFLSAAKDALEAGIKLLVAIPEHVPVRDTMETLELAKQKGAVVIGPNTP 137 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 GI+ P+ KIGIMP F+ G + +LS+SGTL YE + G GQS +GIGGDPV G Sbjct: 138 GIMIPELIKIGIMPPMPFKAGKIAVLSKSGTLLYEISDALTNAGFGQSITIGIGGDPVNG 197 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 T ID ++ E +V+VGEIGG +EE AQ + D G KP V ++AG+ AP Sbjct: 198 TRLIDAFDMVKDIPDLEGMVVVGEIGGDSEEMLAQRIID---SGFNKPTVAYIAGRAAPK 254 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 + MGHAGA++ G G AE K++ +A I +A PA + L + Sbjct: 255 EKRMGHAGAIVMGTYGSAESKVSMFNKANIPVAKRPAEVPVLLAGKMEK 303 >gi|126731208|ref|ZP_01747016.1| succinyl-CoA synthetase subunit alpha [Sagittula stellata E-37] gi|126708510|gb|EBA07568.1| succinyl-CoA synthetase subunit alpha [Sagittula stellata E-37] Length = 298 Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 140/302 (46%), Positives = 201/302 (66%), Gaps = 13/302 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+IL+ T+V+VQGL+G+ G FH ++ I Y T+VV G+ P KG T +N PVF Sbjct: 1 MAILIKDTTRVVVQGLSGRIGQFHAQEMIEY-GTKVVAGVTPGKGGTTV----LNRPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK- 119 TV EA E+T A AS+++VPP+ A DA++E+ EA I VC+T+GIP DM+RVK L + Sbjct: 56 TVREAVEQTGATASLLFVPPAFAADAMMEAAEAGIETAVCVTDGIPAQDMMRVKRFLRRF 115 Query: 120 ---SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 RLIGPNC GI++P +GIMP I+ G VGI+ RSGTL YEA Q G+G Sbjct: 116 PRDRKMRLIGPNCAGIISPGQGFMGIMPPHIYTAGRVGIIGRSGTLGYEAASQMQALGIG 175 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+++GIGGDP+ G+ F D+LELF D T++++M+GEIGG E EA+++++D Sbjct: 176 ISSSIGIGGDPINGSSFRDILELFENDPDTDAVMMIGEIGGPQEAEASEYVRDHM----T 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+ ++AG AP GR MGHAGA+IS A++K++ + GI +AP+P+ +G ++ + Sbjct: 232 KPVAAYIAGLAAPKGRKMGHAGAIISAFGESAQEKVDMLSAVGITVAPNPSAMGETVARM 291 Query: 297 LG 298 LG Sbjct: 292 LG 293 >gi|312080934|ref|XP_003142812.1| succinate-CoA ligase [Loa loa] gi|307762022|gb|EFO21256.1| succinate-CoA ligase [Loa loa] Length = 238 Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 139/234 (59%), Positives = 181/234 (77%), Gaps = 1/234 (0%) Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSR 123 A+E T A+ASVIYVP A AI E+I+AEIPL+VC+TEG+P DMV+V+ RL +++ +R Sbjct: 1 AREATGADASVIYVPARFAAKAIEEAIDAEIPLVVCVTEGVPQQDMVKVRNRLMKQNKTR 60 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPNCPGI+ P+ CKIGIMPG I RKG +G++SRSGTLTYEAV QT+ GLGQ+ VGI Sbjct: 61 LLGPNCPGIICPEECKIGIMPGHIHRKGVIGVVSRSGTLTYEAVHQTTLFGLGQTLCVGI 120 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDP GT FID L++FL D T+ I+++GEIGG EE+AA+FLK+ KP+V F+ Sbjct: 121 GGDPFNGTNFIDCLDIFLRDPQTKGIILIGEIGGQDEEKAAEFLKENNSGPNAKPVVSFI 180 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 AG+TAPPGR MGHAGA+I+GGKG A DKI A+K G+ ++ SPA++G + E L Sbjct: 181 AGQTAPPGRRMGHAGAIIAGGKGTAADKIEALKSVGVLVSASPAQMGAMMAEAL 234 >gi|330935373|ref|XP_003304935.1| hypothetical protein PTT_17669 [Pyrenophora teres f. teres 0-1] gi|311318125|gb|EFQ86872.1| hypothetical protein PTT_17669 [Pyrenophora teres f. teres 0-1] Length = 724 Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 123/301 (40%), Positives = 190/301 (63%), Gaps = 9/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +T+V+ QG TGK T + +++I + T VVGG+ P +G ++ +PV + Sbjct: 43 NLKIGAHTRVIFQGFTGKQATANAKESIEW-GTNVVGGVKPN-----ASGEHLGLPVLPS 96 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A E+ +A+ IYV A AI E+IEAE+PLI+ + E IP+ DM+R+ + L+ +S Sbjct: 97 VRAAMEQLKPDATGIYVAAHQATAAIEEAIEAEVPLIIAVAEHIPLHDMMRIHSMLQSQS 156 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SRLIG N PGI++ C+IG P F G VGI+++SGTL+YE V ++ GLGQS Sbjct: 157 KSRLIGANAPGIISAIGRCRIGFQPLPTFSPGHVGIVAKSGTLSYETVGSLTRAGLGQSL 216 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKP 238 + +GGD + GT F+D LE+F D+ TE+I++VGE+GG+ EEEAA ++ + +R + KP Sbjct: 217 CIAVGGDVIAGTNFVDALEVFEHDKDTEAIIIVGELGGTTEEEAADWIINYRRRVKDPKP 276 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I + G AP + MGHAGA + G+G AE K A++ AG+ + PA+ G + ++L Sbjct: 277 IAAVIGGFQAPHNKVMGHAGAWVGLGEGTAESKFKALERAGVTMVDHPAKFGGVMKDILA 336 Query: 299 S 299 Sbjct: 337 K 337 >gi|215445098|ref|ZP_03431850.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis T85] Length = 288 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 132/263 (50%), Positives = 175/263 (66%), Gaps = 14/263 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGH 256 KP+VG+VAG TAP G+TMG Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGP 256 >gi|169610772|ref|XP_001798804.1| hypothetical protein SNOG_08494 [Phaeosphaeria nodorum SN15] gi|160702150|gb|EAT83662.2| hypothetical protein SNOG_08494 [Phaeosphaeria nodorum SN15] Length = 661 Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 126/300 (42%), Positives = 191/300 (63%), Gaps = 9/300 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + K+T+V+ QG TGK T + ++++ + T VVGG+ PK +G ++ PV + Sbjct: 43 NLRIGKDTRVIFQGFTGKLATANAKESMDW-GTNVVGGVKPKG-----SGEHLGKPVLPS 96 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A E+ +A+ IYV A AI E+IEAE+PLIV + E IP+ D++R+ + L+ +S Sbjct: 97 VRAAMEQLKPDATGIYVAAHQATAAIEEAIEAEVPLIVAVAEHIPLHDIMRIHSMLQSQS 156 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SRL+G N PGI++ C+IG P F G +GI+++SGTL+YE V ++ GLGQS Sbjct: 157 KSRLVGANAPGIISAIGRCRIGFQPLPTFSPGHIGIVAKSGTLSYETVGSLTRAGLGQSL 216 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKP 238 + +GGD + GT F+D L++F DE TE+I++VGE+GG++EEEAA ++KD KR KP Sbjct: 217 CIAVGGDVIAGTNFVDALKVFEKDEDTEAIILVGELGGTSEEEAAAWIKDYRKRVKNPKP 276 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I + G A PG+ MGHAGA G+G AE K A++ G+ + PA+ G + E+L Sbjct: 277 IAAAIGGFQASPGKVMGHAGAWTGLGEGTAESKYKALENVGVTMVDHPAKFGGVMKEILA 336 >gi|289757037|ref|ZP_06516415.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis T85] gi|289712601|gb|EFD76613.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis T85] Length = 291 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 132/263 (50%), Positives = 175/263 (66%), Gaps = 14/263 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVS- 239 Query: 234 GRKKPIVGFVAGKTAPPGRTMGH 256 KP+VG+VAG TAP G+TMG Sbjct: 240 ---KPVVGYVAGFTAPEGKTMGP 259 >gi|254169025|ref|ZP_04875863.1| CoA-ligase domain protein [Aciduliprofundum boonei T469] gi|197621995|gb|EDY34572.1| CoA-ligase domain protein [Aciduliprofundum boonei T469] Length = 253 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 118/262 (45%), Positives = 162/262 (61%), Gaps = 9/262 (3%) Query: 37 VGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIP 96 V G+ P KG NVPV+ TV E A++I VP DA E++ I Sbjct: 1 VAGVTPGKGGMKVH----NVPVYDTVEETL-VHEPEATMITVPAPFVKDAAFEAMYNGIR 55 Query: 97 LIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGIL 156 ++ +TE +P+ D + + +IGPN PGI P K+GIMP IF+KG+V + Sbjct: 56 VVYILTEKVPLHDALDIVTYARSHGHVVIGPNGPGITVPGKTKMGIMPNHIFKKGTVAVA 115 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIG 216 SRSGTLTYE V + G GQST +G+GGD + G F+D+LELF DE TE+IV+VGEIG Sbjct: 116 SRSGTLTYEIVNALTLNGYGQSTVIGLGGDRITGLNFVDILELFEKDEDTEAIVLVGEIG 175 Query: 217 GSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMK 276 G+AEEEAA+++K KP+V ++AG++APPG+ MGHAGA+I+ GKG AE KI A Sbjct: 176 GTAEEEAAEYIKKNVS----KPVVAYIAGRSAPPGKRMGHAGAIITRGKGTAESKIKAFN 231 Query: 277 EAGICIAPSPARIGRSLVELLG 298 EAG+ +A P I ++L ++ Sbjct: 232 EAGVPVAEFPWEIPQALKKVYK 253 >gi|261203545|ref|XP_002628986.1| succinyl-CoA ligase alpha-chain [Ajellomyces dermatitidis SLH14081] gi|239586771|gb|EEQ69414.1| succinyl-CoA ligase alpha-chain [Ajellomyces dermatitidis SLH14081] gi|239608195|gb|EEQ85182.1| succinyl-CoA ligase alpha-chain [Ajellomyces dermatitidis ER-3] gi|327349379|gb|EGE78236.1| succinyl-CoA ligase alpha-chain [Ajellomyces dermatitidis ATCC 18188] Length = 687 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 127/302 (42%), Positives = 193/302 (63%), Gaps = 9/302 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +T+VL QG TG+ T + ++++ + T++VGG+ P G ++ +P+F + Sbjct: 46 NLKIGAHTRVLFQGFTGRQATANVKESLTW-GTKIVGGVKPG-----VEGEHLGLPIFPS 99 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A+E+T +A+ IYVP AI E+I AEIPLIV + E +PV DM+RV A L+ +S Sbjct: 100 VQVAQEKTKPDATAIYVPGPQTAQAIEEAIAAEIPLIVAVAEHVPVHDMLRVHAMLQTQS 159 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SRL+G NCPGI++ C+IG P F G++GI+++SGTL YE V T++ GLGQS Sbjct: 160 KSRLVGANCPGIISAIGKCRIGFQPLPCFSPGNIGIVAKSGTLGYETVASTTRAGLGQSL 219 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKP 238 + +GGD + GT+F+D L++ DE T I++VGEIGG+AE +AA+++ D +R KP Sbjct: 220 CISVGGDVLAGTDFVDALKILEHDEDTHGIIIVGEIGGAAEIDAAEWILDYRRRTVDPKP 279 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I+ V G APPGR MGHAGA + G + KI A+++AG + P G + LLG Sbjct: 280 IMAVVGGIHAPPGRVMGHAGAWAAPGDPDPQTKIRALRDAGAVMVNHPENFGEGMKMLLG 339 Query: 299 SL 300 ++ Sbjct: 340 NM 341 >gi|167957427|ref|ZP_02544501.1| succinyl-CoA synthetase, alpha subunit [candidate division TM7 single-cell isolate TM7c] Length = 286 Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats. Identities = 123/285 (43%), Positives = 180/285 (63%), Gaps = 10/285 (3%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V++QG+TGK G FH + Y +T +V G P + + G VPVF T+ + K+R A Sbjct: 11 VIIQGITGKNGRFHARNMLDY-KTSIVAGTSPNQAISEVHG----VPVFRTIDDIKKRFA 65 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + SVI+VP A AI+E+I+A+IPLI+CITEG+PV DM+ +K +L +S S LIGPNCP Sbjct: 66 IDISVIFVPAPHAKAAILEAIQAQIPLIICITEGVPVHDMLEIKQKLHRSRSVLIGPNCP 125 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G+L P +GI+P S+ G I+SRSGTLTYEA+ +Q G GQ +GIGGD + G Sbjct: 126 GVLLPGRQLLGIIPASLAVPGDTAIVSRSGTLTYEAMSLLTQAGFGQRYIIGIGGDMISG 185 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 + F+D L+LF D + + IVM+GEIGG +E AA ++K + KP+ ++AG +AP Sbjct: 186 SSFVDCLQLFQNDPSVKRIVMIGEIGGISEITAADYIK----QSINKPVYAYIAGHSAPA 241 Query: 251 GRTMGHAGAVI-SGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 G MGH GA++ + A K +++AG A S +++ + + Sbjct: 242 GIQMGHTGAILGTNALESAATKTAYLQQAGAITANSISQLIQKIK 286 >gi|302889181|ref|XP_003043476.1| hypothetical protein NECHADRAFT_54871 [Nectria haematococca mpVI 77-13-4] gi|256724393|gb|EEU37763.1| hypothetical protein NECHADRAFT_54871 [Nectria haematococca mpVI 77-13-4] Length = 307 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 133/276 (48%), Positives = 179/276 (64%), Gaps = 5/276 (1%) Query: 26 EQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGD 85 + + T VVGG+ P KG +++PVF+TV EA + S ++VP A Sbjct: 12 ARDTIEYGTNVVGGVSPGKGGQTH----LDLPVFSTVQEAMAEVKPHVSAVFVPAQFAAK 67 Query: 86 AIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTPDSCKIGIMP 144 AIIESIEAE+PL+V + E +PV DM+RV L +S +RL+GPNCPGI+ P+ C++GIMP Sbjct: 68 AIIESIEAEVPLVVSVAEHVPVHDMLRVHEILRTQSKTRLVGPNCPGIIAPEQCRVGIMP 127 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 + +G VGI+S+SGTL+YEAV TS+ GLGQS VG+GGD + GT D L LF E Sbjct: 128 YKQYTRGCVGIVSKSGTLSYEAVGSTSRAGLGQSIVVGMGGDMLPGTTLADGLRLFFEHE 187 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 T+ I+++GEIGG AE EAA +K+ K KP+V VAG+TAP G+TMGHAGAV S G Sbjct: 188 ETKGIIVIGEIGGEAELEAADLIKEYRKTANPKPVVAMVAGRTAPEGKTMGHAGAVFSAG 247 Query: 265 KGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 A K A+++AG + P +G ++ ELLG L Sbjct: 248 DITAGAKAKALEDAGAIVVAHPGVMGETMRELLGIL 283 >gi|219556818|ref|ZP_03535894.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis T17] Length = 307 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 132/263 (50%), Positives = 175/263 (66%), Gaps = 14/263 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKTNVS- 236 Query: 234 GRKKPIVGFVAGKTAPPGRTMGH 256 KP+VG+VAG TAP G+TMG Sbjct: 237 ---KPVVGYVAGFTAPEGKTMGP 256 >gi|225352122|ref|ZP_03743145.1| hypothetical protein BIFPSEUDO_03737 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157369|gb|EEG70708.1| hypothetical protein BIFPSEUDO_03737 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 302 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 128/298 (42%), Positives = 188/298 (63%), Gaps = 19/298 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW------TGGNV 54 M++ ++ V+VQG+TG G HT + +L T +VGG++ +K G +V Sbjct: 8 MTLFIEDGAPVIVQGMTGHQGMTHTAR-MLKAGTNIVGGVNARKAGQEVNFPAAKDGEDV 66 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 + VF AEA E T A ASV++VPP A DA++E+IEA I LIV ITEGIPV D Sbjct: 67 TLRVFGNCAEAVEVTGAQASVVFVPPRFAKDAVVEAIEAGIKLIVVITEGIPVADSAYFV 126 Query: 115 ARLEKSSSRLIGPNCPGILT------PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R++GPNCPG+LT + C +GI+P I +G +G++S+SGTLTY+ + Sbjct: 127 ELALRKDVRIVGPNCPGLLTLPSTEGVNGCNLGIIPDGIVSRGPLGLVSKSGTLTYQLMG 186 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + S +G + +G GGDP+ GT + LE F D+AT+++VM+GEIGGSAE++AA++ Sbjct: 187 ELSD--IGFTACLGAGGDPIVGTTLQEALEAFENDDATKAVVMIGEIGGSAEQDAAKWAS 244 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 + KP+V ++AG TAP G+ MGHAGA++SGGKG A+DK A++ GI + +P Sbjct: 245 EHM----TKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKEALEAVGIRVGRTP 298 >gi|289568925|ref|ZP_06449152.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis T17] gi|289542679|gb|EFD46327.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis T17] Length = 310 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 132/263 (50%), Positives = 175/263 (66%), Gaps = 14/263 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKTNVS- 239 Query: 234 GRKKPIVGFVAGKTAPPGRTMGH 256 KP+VG+VAG TAP G+TMG Sbjct: 240 ---KPVVGYVAGFTAPEGKTMGP 259 >gi|238498400|ref|XP_002380435.1| succinyl-CoA synthetase subunit alpha, putative [Aspergillus flavus NRRL3357] gi|220693709|gb|EED50054.1| succinyl-CoA synthetase subunit alpha, putative [Aspergillus flavus NRRL3357] Length = 655 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 126/301 (41%), Positives = 186/301 (61%), Gaps = 18/301 (5%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +T+VL QG T L T++VGG+ P G ++ +PVF + Sbjct: 42 NLKIGAHTRVLFQGFTES----------LAWGTKIVGGVKPG-----VEGEHLGLPVFPS 86 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A+E+ +AS IYVP + AI E+IEAEIPL+V + E +P+ D++R+ + L+ +S Sbjct: 87 VKAAQEKAKPDASAIYVPGNQTAKAIEEAIEAEIPLVVAVAEHVPIHDVLRIHSMLQTQS 146 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+G NCPGI++ C+IG P F G +GI+++SGTL+YE V TS+ GLGQS Sbjct: 147 KTRLVGANCPGIISAIGKCRIGFQPLPCFSPGKIGIVAKSGTLSYETVASTSRAGLGQSL 206 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKP 238 + +GGD + GT F+D L++F D TE I++VGEIGG+AE +AA+++KD +R KP Sbjct: 207 CISMGGDVLAGTNFVDALKIFENDPDTEGIILVGEIGGTAEIDAAEWIKDYNRRTANPKP 266 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I+G V G AP GR MGHAGA + G+ GA K A++ AG + P + G + LL Sbjct: 267 IMGLVGGLHAPAGRIMGHAGAWTAVGEPGAHAKYQALERAGAVMVNHPEKFGEGMKTLLN 326 Query: 299 S 299 S Sbjct: 327 S 327 >gi|145539904|ref|XP_001455642.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124423450|emb|CAK88245.1| unnamed protein product [Paramecium tetraurelia] Length = 310 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 139/298 (46%), Positives = 183/298 (61%), Gaps = 10/298 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + V+K+TKV+ QG+TG GTF TEQA+ Y T++VGG+ PKK + G +PVF Sbjct: 18 VWVNKHTKVICQGITGNQGTFQTEQALNY-FTKMVGGVSPKKAGSTHLG----LPVFKNC 72 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSS 121 EAK+ T +ASVIYVPP A AIIE+IEA+I L+V IT+GIP DM++VK L +S Sbjct: 73 QEAKQNTGCDASVIYVPPPTAASAIIEAIEAQIGLVVVITDGIPQHDMIKVKHALRSQSV 132 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +R+IGPNCPGI+ P+ CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQST V Sbjct: 133 TRVIGPNCPGIIKPNECKIGIMPGYIHQNGKIGIVSRSGTLTYEAVDQTTRAGLGQSTVV 192 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G IVG Sbjct: 193 GXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIVG 248 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 F+AG TAPP R MGHAGA++S GKG A +KI A+++AGI + SPA+IG++++E++ Sbjct: 249 FIAGITAPPERRMGHAGAIVSKGKGSAPEKIRALEQAGIRVVKSPAQIGKTMLEVMKE 306 >gi|259488488|tpe|CBF87961.1| TPA: succinyl-CoA synthetase subunit alpha, putative (AFU_orthologue; AFUA_1G10830) [Aspergillus nidulans FGSC A4] Length = 703 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 127/317 (40%), Positives = 197/317 (62%), Gaps = 25/317 (7%) Query: 2 SILVDKNTKVLVQGLTGK----------------AGTFHTEQAILYCQTQVVGGIHPKKG 45 ++ + +T+VL QG TGK T + ++++ + T++VGG+ P Sbjct: 42 NLKIGAHTRVLFQGFTGKSTHGYITISLTSIAGRQATANVKESLEW-GTKIVGGVKPG-- 98 Query: 46 STYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI 105 G ++ +PVF +V A+ + +AS IYVP S AI E+IEAEIPL+V + E + Sbjct: 99 ---VEGEHLGLPVFPSVKAAQAQAKPDASAIYVPGSQTAKAIEEAIEAEIPLVVAVAEHV 155 Query: 106 PVLDMVRVKARLE-KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLT 163 P+ D++RV + L+ +S +RL+G NCPGI++ C+IG P F G +GI+++SGTL+ Sbjct: 156 PLHDILRVHSILKTQSKTRLVGANCPGIISAIGKCRIGFQPLPCFAPGKIGIVAKSGTLS 215 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 YE V T++ GLGQS + +GGDP+ GT F+D L++F D TE I++VGEIGG+AE +A Sbjct: 216 YETVASTTRAGLGQSLCISMGGDPLAGTNFVDALKIFENDPDTEGIILVGEIGGTAEMDA 275 Query: 224 AQFLKDEAKRGR-KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 A++++D +R KPI+ V G+ APPGR MGHAGA + G+ G E+K A++ AG + Sbjct: 276 AEWIRDYRRRTTSPKPIMALVGGRQAPPGRIMGHAGAWTAPGEPGPEEKYRALERAGAVM 335 Query: 283 APSPARIGRSLVELLGS 299 P + G+ + LL + Sbjct: 336 VNHPEKFGKGMKALLTN 352 >gi|303327247|ref|ZP_07357689.1| succinate-CoA ligase (ADP-forming), alpha subunit [Desulfovibrio sp. 3_1_syn3] gi|302863235|gb|EFL86167.1| succinate-CoA ligase (ADP-forming), alpha subunit [Desulfovibrio sp. 3_1_syn3] Length = 296 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 116/302 (38%), Positives = 178/302 (58%), Gaps = 11/302 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI V+K+++V VQG+TGK G+F T + TQVV G+ P K G VPV+ Sbjct: 1 MSIFVNKDSRVAVQGVTGKEGSFWTRH-MKEMGTQVVFGVTPGKEGQDVAG----VPVYH 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V A+ ++++VPP DAI E+++A I I +GIP+ + V+++ Sbjct: 56 SVRRGMREHPADVAMLFVPPRFTKDAIFEALDAGIRKICATADGIPLHESVQIRKAALSC 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++G N GI++ +GI+P S+++KG VG+++RSG+LT E + + G G Sbjct: 116 GAMVVGGNTTGIISVGEALLGIIPYWIDSVYKKGHVGVMTRSGSLTNEVTAEIIKGGFGV 175 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 +T VG+GGDPV GT F ++L ++ D T ++V++GE+GGS EEE A+ K Sbjct: 176 TTLVGVGGDPVPGTRFAELLPMYQEDPDTHALVVIGELGGSMEEEVAEA---VEAGVFSK 232 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+V F+ G+TAP G+ MGHAGA+ S G G + K A+ AG +A P +G L E+L Sbjct: 233 PLVVFMGGRTAPEGKRMGHAGAIASHGHGTVKGKTAALLRAGAGVAAKPGEVGPLLREML 292 Query: 298 GS 299 GS Sbjct: 293 GS 294 >gi|126642750|ref|YP_001085734.1| succinyl-CoA synthetase alpha chain [Acinetobacter baumannii ATCC 17978] Length = 240 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 128/240 (53%), Positives = 178/240 (74%), Gaps = 6/240 (2%) Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE--K 119 + EA T A+ASVIYVP D+I+E++++ + LIV ITEG+P +DM++ K LE Sbjct: 1 MKEAVRETNADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTIDMLKAKRYLETNG 60 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +RL+GPNCPG++TP CKIGIMPG I + G +GI+SRSGTLTYEAV QT++ GLGQST Sbjct: 61 NGTRLVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQST 120 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G I+ L+LF D T++I+M+GEIGG+AEEEAA+F+K KP+ Sbjct: 121 CIGIGGDPIPGMNQIEALQLFQDDPDTDAIIMIGEIGGTAEEEAAEFIKSNV----TKPV 176 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG++AG TAP G+ MGHAGA+ISGG+G AE+K A ++AG+ SPA +G +++++L Sbjct: 177 VGYIAGVTAPKGKRMGHAGAIISGGQGTAEEKFAAFEKAGMAYTRSPAELGSTMLQVLKE 236 >gi|156314281|ref|XP_001617908.1| hypothetical protein NEMVEDRAFT_v1g156386 [Nematostella vectensis] gi|156196424|gb|EDO25808.1| predicted protein [Nematostella vectensis] Length = 219 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 129/222 (58%), Positives = 163/222 (73%), Gaps = 4/222 (1%) Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD 136 +VP D+I+E+ A I LIVCITE IPVLDM+ K + ++ RLIGPNCPG++TP Sbjct: 1 FVPAPFCKDSILEAANAGIKLIVCITEHIPVLDMLECKVKCDELGVRLIGPNCPGVITPG 60 Query: 137 SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST VGIGGDP+ G+ FID+ Sbjct: 61 ECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDI 120 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGH 256 LELF D TE+IVM+GEIGG+AEEEAA ++K KP+V ++AG TAP G+ MGH Sbjct: 121 LELFQNDPQTEAIVMIGEIGGTAEEEAAAYIKANV----TKPVVSYIAGVTAPKGKRMGH 176 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AGA+ISGGKG A++K A+++AG+ S A+IG +L E+ G Sbjct: 177 AGAIISGGKGTADEKFAALEDAGVKTVRSLAQIGDALKEVTG 218 >gi|303246553|ref|ZP_07332832.1| CoA-binding domain protein [Desulfovibrio fructosovorans JJ] gi|302492263|gb|EFL52138.1| CoA-binding domain protein [Desulfovibrio fructosovorans JJ] Length = 703 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 126/293 (43%), Positives = 177/293 (60%), Gaps = 9/293 (3%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 +D + VLVQG+TG+AG H ++ Y VV G+ P +G T G VPV+ TVA Sbjct: 417 LDGASGVLVQGITGRAGRLHAKRMRAY-GANVVCGVTPFRGGTLMDG----VPVYDTVAG 471 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 A + SVI+VP GA DA++E+IEA IP IVCIT+G+P DM+ V++ L + L Sbjct: 472 AAKAHDIALSVIFVPGMGAADAVLEAIEAGIPRIVCITDGVPQKDMLAVRSALSGRDTLL 531 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPN PG+L P + GIMP F G V + SRSGTLTYE + S G+GQ+ A GIG Sbjct: 532 LGPNTPGMLLPGKMQAGIMPADPFIPGPVAVFSRSGTLTYEVCSRLSAAGIGQAVAAGIG 591 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 GDP G F+++ E+ D +++++GE+GG AEE+ A ++ + G KP+ FVA Sbjct: 592 GDPFGGAGFVELCEMVRDDPQVLAVMVIGEVGGRAEEDLAAYVAE---TGYPKPVAAFVA 648 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G TAP GR +GHAGA++ G A K++ +K AGI + P + + LL Sbjct: 649 GMTAPAGRALGHAGALLEHPGGIA-AKVSCLKRAGIAVCPELGDVAGVMAGLL 700 >gi|225569265|ref|ZP_03778290.1| hypothetical protein CLOHYLEM_05347 [Clostridium hylemonae DSM 15053] gi|225162064|gb|EEG74683.1| hypothetical protein CLOHYLEM_05347 [Clostridium hylemonae DSM 15053] Length = 306 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 119/296 (40%), Positives = 186/296 (62%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D++T +L+ G+TGK G H ++ L + +++ G+ P KG G VPVF Sbjct: 1 MSILIDQDTAMLIIGITGKQGRIHCKRT-LESKARLLAGVAPGKGGQSVEG----VPVFE 55 Query: 61 TVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVA+A+ A+++ VP DA ++++ I L+ ITE +PV+D +++ + + Sbjct: 56 TVADARAVFPEIRAAMLLVPKQFVRDAAFQALDEGIRLLAVITEFVPVMDALQIVHKAKA 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++++GPN G+++P K+GIMP I+ KG +GI+SRSGTLT+E + +G G ST Sbjct: 116 LDAQVVGPNTIGVISPGKSKLGIMPDYIYGKGHIGIISRSGTLTHETASNLTFKGFGLST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VGIGGD V G + DV+E F D+ T++IV++GEIGG++EE AA +K+ KKP+ Sbjct: 176 CVGIGGDAVVGMDHADVIEYFAQDDETDAIVIIGEIGGTSEEMAAAKIKELN---LKKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 ++AG AP + MGHAGA++SGG G KI A+++AG I P+ +I + E Sbjct: 233 CAYIAGMYAPENKRMGHAGAIVSGGMGTVRSKIAALEDAGAVICPTLGKIVEFMDE 288 >gi|283853552|ref|ZP_06370791.1| CoA-binding domain protein [Desulfovibrio sp. FW1012B] gi|283571051|gb|EFC19072.1| CoA-binding domain protein [Desulfovibrio sp. FW1012B] Length = 704 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 121/293 (41%), Positives = 172/293 (58%), Gaps = 9/293 (3%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 +D+ + VLVQGLTG+AG H + ++ T V G+ P +G T G +PV+ TVA+ Sbjct: 418 LDQTSGVLVQGLTGRAGRLHARR-MVAGGTNVACGVTPFRGGTAVDG----IPVYGTVAQ 472 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 A SV++VP GA DA++E+ EA I IVCIT+G+P DM+ V+ L + L Sbjct: 473 AVRHHDIALSVLFVPAPGAADAVLEAAEAGIRRIVCITDGVPQKDMLAVRTALAGQGTLL 532 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPN PG+ P + GIMPG F G V + SRSGTL YE + + G+GQ+ GIG Sbjct: 533 LGPNTPGLCLPGRMQAGIMPGEPFSPGPVAVFSRSGTLAYEVCSRLTAAGIGQAVVAGIG 592 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 GDP G F+++ E+ DE ++++VGE+GG AEE+ A + G KP+ FVA Sbjct: 593 GDPFGGAGFVELCEMVRHDERVRAVMVVGEVGGYAEEDLAAHVAA---TGYPKPVAAFVA 649 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G TAPPGRT+GHAGA++ GG +K+ + AGI + P + + L Sbjct: 650 GLTAPPGRTLGHAGALLDR-PGGITEKLACLARAGIAVCPELGDVAGVMAGAL 701 >gi|73965859|ref|XP_860955.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 3 [Canis familiaris] Length = 951 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 550 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 730 GIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYV 786 Query: 283 APSPARIGRSLVELLGSL 300 PS +G + + L Sbjct: 787 PPSFDELGEIIQSVYEDL 804 >gi|186685263|ref|YP_001868459.1| CoA-binding domain-containing protein [Nostoc punctiforme PCC 73102] gi|186467715|gb|ACC83516.1| CoA-binding domain protein [Nostoc punctiforme PCC 73102] Length = 295 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 106/297 (35%), Positives = 166/297 (55%), Gaps = 15/297 (5%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + +KVL+QG H Q Y T +V G++P G G +PVF V E Sbjct: 3 LTPESKVLIQGFCEFISGTHVAQMQAY-GTNLVAGVNPGCGGQELHG----LPVFDLVEE 57 Query: 65 AKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 E+ + ++I V P DA +E+I + I I+ IT G+P LDMV++ + E + Sbjct: 58 VIEQFGVIDTTIICVDPYDVLDAALEAIASHISQIIIITAGVPPLDMVQLLRKAEACETL 117 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 +IGPN PGI+ P +G P + G VGI+SRS TLTYE ++ ++ GLGQS +V I Sbjct: 118 VIGPNSPGIIVPGKILLGTQPSEFYTPGVVGIVSRSSTLTYEVAYELTKAGLGQSISVSI 177 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G D + G+ F+ L++ DE TE+IV+VG+ GG +EE AA+++ + KP++ ++ Sbjct: 178 GSDAIVGSSFLQWLQILDEDETTEAIVLVGQPGGGSEEAAARYIAEAI----DKPVIAYI 233 Query: 244 AGKTAPPGRTMGHAGAVIS-----GGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 AG+ APPG++ G + + G A+ K+ A+KEA + +A P++I L + Sbjct: 234 AGRQAPPGKSWRQTGTLATVIGRDPNFGTAQSKLAALKEAEVPVAERPSQIPELLRK 290 >gi|73965877|ref|XP_861212.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 12 [Canis familiaris] Length = 1111 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 500 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 559 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 560 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 619 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 620 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 679 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 680 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 739 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 740 GIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYV 796 Query: 283 APSPARIGRSLVELLGSL 300 PS +G + + L Sbjct: 797 PPSFDELGEIIQSVYEDL 814 >gi|322703720|gb|EFY95325.1| CoA-ligase, putative [Metarhizium anisopliae ARSEF 23] Length = 814 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 125/303 (41%), Positives = 183/303 (60%), Gaps = 27/303 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA--EAKERTAANASVI 76 + T + + I Y T+VVGG+ P KG +++PVF TV +A E+ + S + Sbjct: 517 RQATSNAKDTIGY-GTKVVGGVSPGKGGQTH----LDLPVFGTVKEPQAVEQVNPHVSAV 571 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTP 135 +VP A AIIE+IEAE+P++V + E IPV D++RV+ L +S SRL+GPNCPG++ P Sbjct: 572 FVPAPFAARAIIEAIEAEVPVVVSVAEHIPVHDLLRVQEVLRTQSRSRLVGPNCPGVIAP 631 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK------ 189 C++GIMP + +G VGI+S+SGTL+YEAV T+ GLGQS V +GGDP+ Sbjct: 632 GQCRVGIMPFRQYARGCVGIVSKSGTLSYEAVGATTAAGLGQSLVVAVGGDPMPGMSAPC 691 Query: 190 ------------GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG-RK 236 GT +D L + E TE +V++GEIGG E AA+ +++ + Sbjct: 692 RFVCIGPDAGGLGTTIVDALRVLFEHEETEGVVVIGEIGGEQELRAAEMIREYRRSTPNP 751 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP+V VAG+TAP G+ MGHAGAV++ G A +K A+++AG + P P +G ++ L Sbjct: 752 KPVVAMVAGQTAPRGKVMGHAGAVLTPGDVTAAEKARALEDAGAVLVPHPGVMGSTMKAL 811 Query: 297 LGS 299 LG Sbjct: 812 LGR 814 >gi|73965865|ref|XP_861037.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 6 [Canis familiaris] Length = 1088 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 477 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 536 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 537 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 596 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 597 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 656 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 657 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 716 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 717 GIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYV 773 Query: 283 APSPARIGRSLVELLGSL 300 PS +G + + L Sbjct: 774 PPSFDELGEIIQSVYEDL 791 >gi|312214014|emb|CBX94016.1| similar to succinyl-CoA ligase subunit alpha [Leptosphaeria maculans] Length = 700 Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats. Identities = 125/301 (41%), Positives = 191/301 (63%), Gaps = 9/301 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +T+V+ QG TGK T + ++++ + T VVGG+ P +G ++ PV + Sbjct: 43 NLKIGADTRVIFQGFTGKLATANAKESMEW-GTNVVGGVKPNG-----SGEHLGKPVLPS 96 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A E+ +A+ IYV A AI E+IEAE+PLIV + E IP+ D++R+ + L+ +S Sbjct: 97 VRAAMEQLKPDATGIYVAAHQAAAAIEEAIEAEVPLIVAVAEHIPLHDIMRIHSMLQSQS 156 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SRL+G N PGI++ C+IG P F G VGI+++SGTL+YE V ++ G+GQS Sbjct: 157 KSRLVGANAPGIISAIGRCRIGFQPLPTFSPGHVGIVAKSGTLSYETVGSLTRAGVGQSL 216 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK-KP 238 + +GGD + GT FID L++F D+ T++IV++GE+GG+ EEEAA+++KD KR R KP Sbjct: 217 CIAVGGDVMAGTNFIDALKVFETDDDTQAIVLIGELGGTTEEEAAEWIKDYDKRVRNPKP 276 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I + G A PGR MGHAGA G+G AE K A++ AG+ + PA+ G + E++ Sbjct: 277 IAAVIGGFQAAPGRVMGHAGAWAGLGEGTAESKYKALESAGVTMVDHPAKFGGVMKEIMA 336 Query: 299 S 299 Sbjct: 337 K 337 >gi|319653327|ref|ZP_08007428.1| hypothetical protein HMPREF1013_04045 [Bacillus sp. 2_A_57_CT2] gi|317394976|gb|EFV75713.1| hypothetical protein HMPREF1013_04045 [Bacillus sp. 2_A_57_CT2] Length = 305 Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats. Identities = 128/307 (41%), Positives = 179/307 (58%), Gaps = 16/307 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M IL+++NT++ VQG+TG+ + + Y T++ GI P KG Y G VPV+ Sbjct: 1 MPILINQNTRLAVQGITGREASMIVSHTLAY-GTRIYAGITPGKGGQYVQG----VPVYD 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA ++ NA++I VPP+ A DA++E+I I LIV TE IP D V++ K Sbjct: 56 TVAEAVKKHGINATLIVVPPAFALDAVLEAISNGIKLIVVTTENIPQHDAVKLLYAARKE 115 Query: 121 SSRLIGPNCPGILTP-DSCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 + +IGPN G++ P D K+G + P F G+VG++SRSG +T E + + G Sbjct: 116 NVTIIGPNTVGMINPKDRIKMGSIGGDRPERCFIPGNVGVISRSGGMTAETSWMVKRAGF 175 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G +T++GIGGD + GT D+L LF DE TE++V E G S EEEAAQ LK+ G Sbjct: 176 GVTTSIGIGGDSLIGTTIRDLLVLFEKDEETEAVVTFSEPGTSFEEEAAQLLKE---GGF 232 Query: 236 KKPIVGFVAGKT---APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KP++ FVAGK P G GHAGA+ISG G K+ A+KE+G + I Sbjct: 233 TKPLISFVAGKFTESMPEGTVFGHAGAMISGNTGRPSLKMKALKESGAHVVEKYDDIISV 292 Query: 293 LVELLGS 299 L ++LGS Sbjct: 293 LQKVLGS 299 >gi|73965875|ref|XP_861179.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 11 [Canis familiaris] Length = 1097 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 486 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 545 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 546 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 605 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 606 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 665 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 666 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 725 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 726 GIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYV 782 Query: 283 APSPARIGRSLVELLGSL 300 PS +G + + L Sbjct: 783 PPSFDELGEIIQSVYEDL 800 >gi|162287306|ref|NP_058683.2| ATP-citrate synthase isoform 1 [Rattus norvegicus] gi|149054225|gb|EDM06042.1| ATP citrate lyase, isoform CRA_a [Rattus norvegicus] Length = 1101 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 550 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 730 GIKEGR---LTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 786 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 787 PRSFDELGEIIQSVYEDL 804 >gi|313151222|ref|NP_001186225.1| ATP-citrate synthase isoform 1 [Mus musculus] gi|74210124|dbj|BAE21336.1| unnamed protein product [Mus musculus] gi|123231524|emb|CAM27800.1| ATP citrate lyase [Mus musculus] gi|123236002|emb|CAM23024.1| ATP citrate lyase [Mus musculus] Length = 1101 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 550 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 730 GIKEGR---LTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 786 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 787 PRSFDELGEIIQSVYEDL 804 >gi|157427728|ref|NP_001098772.1| ATP citrate lyase [Sus scrofa] gi|156140098|gb|ABU51323.1| ATP citrate lyase [Sus scrofa] Length = 1076 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 143/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 480 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 539 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 540 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + E+ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKKAEQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 720 GIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAIAKNQALKEAGVFV 776 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 777 PRSFDELGEIIQSVYEDL 794 >gi|113116|sp|P16638|ACLY_RAT RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme gi|203490|gb|AAA74463.1| ATP citrate-lyase [Rattus norvegicus] Length = 1100 Score = 238 bits (606), Expect = 9e-61, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 489 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 548 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 549 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 608 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 609 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 668 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 669 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 728 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 729 GIKEGR---LTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 785 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 786 PRSFDELGEIIQSVYEDL 803 >gi|148670608|gb|EDL02555.1| ATP citrate lyase, isoform CRA_a [Mus musculus] Length = 1102 Score = 238 bits (606), Expect = 9e-61, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 491 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 550 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 551 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 610 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 611 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 670 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 671 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 730 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 731 GIKEGR---LTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 787 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 788 PRSFDELGEIIQSVYEDL 805 >gi|73965871|ref|XP_861122.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 9 [Canis familiaris] Length = 1095 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 484 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 543 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 544 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 603 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 604 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 663 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 664 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 723 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 724 GIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYV 780 Query: 283 APSPARIGRSLVELLGSL 300 PS +G + + L Sbjct: 781 PPSFDELGEIIQSVYEDL 798 >gi|73965863|ref|XP_861010.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 5 [Canis familiaris] Length = 1085 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 474 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 533 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 534 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 593 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 594 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 653 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 654 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 713 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 714 GIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYV 770 Query: 283 APSPARIGRSLVELLGSL 300 PS +G + + L Sbjct: 771 PPSFDELGEIIQSVYEDL 788 >gi|332847769|ref|XP_511495.3| PREDICTED: ATP-citrate synthase [Pan troglodytes] Length = 1041 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A + + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 550 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGAEEYKICR 729 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KPIV + G A GHAGA + A K A+KEAG+ + Sbjct: 730 GIKEGR---LTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 786 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 787 PRSFDELGEIIQSVYEDL 804 >gi|71680955|gb|AAI00619.1| Acly protein [Rattus norvegicus] Length = 1091 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 480 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 539 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 540 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 720 GIKEGR---LTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 776 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 777 PRSFDELGEIIQSVYEDL 794 >gi|327310445|ref|YP_004337342.1| succinyl-CoA synthetase subunit alpha [Thermoproteus uzoniensis 768-20] gi|326946924|gb|AEA12030.1| Succinyl-CoA synthetase, subunit alpha [Thermoproteus uzoniensis 768-20] Length = 266 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 119/273 (43%), Positives = 178/273 (65%), Gaps = 9/273 (3%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 +L T+VVGG+ P KG G +PVF TV EA + T ANASV++VP A +A+ Sbjct: 1 MLEYGTKVVGGVTPGKGGATVAG----LPVFDTVEEAVKATGANASVVFVPAKFAAEAVY 56 Query: 89 ESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD-SCKIGIMPGSI 147 E+++A I L+V ITE IP+ + +R + + +IGPNCPGI+ P K+GIMP +I Sbjct: 57 EAVDAGIQLVVVITEHIPIHETLRFVSYAKARGVSIIGPNCPGIVAPPVKAKLGIMPNNI 116 Query: 148 FR-KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 ++ G +G++SRSGTLTYE +Q + GLG +TAVG+GGDP+ GT+ ++ + D Sbjct: 117 YQTPGRIGVVSRSGTLTYEISYQLVRAGLGINTAVGVGGDPIVGTDLVEATLMMAKDPDI 176 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKG 266 ++IV++GE+GG AEE A+ + KKP+VG+VAG+TAPP + MGHAGA++ G G Sbjct: 177 DAIVVIGEVGGDAEERLAKLYAE---GAIKKPLVGYVAGRTAPPEKRMGHAGAIVMLGSG 233 Query: 267 GAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 A K+ A++EAGI +A +P + + +++ L Sbjct: 234 DANGKVKALREAGIPVADTPMEVPQLVLKALKK 266 >gi|73965881|ref|XP_861266.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 14 [Canis familiaris] Length = 1101 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 550 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 730 GIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYV 786 Query: 283 APSPARIGRSLVELLGSL 300 PS +G + + L Sbjct: 787 PPSFDELGEIIQSVYEDL 804 >gi|161760632|ref|NP_001104565.1| ATP-citrate synthase isoform 2 [Rattus norvegicus] gi|149054226|gb|EDM06043.1| ATP citrate lyase, isoform CRA_b [Rattus norvegicus] Length = 1091 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 480 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 539 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 540 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 720 GIKEGR---LTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 776 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 777 PRSFDELGEIIQSVYEDL 794 >gi|29293809|ref|NP_598798.1| ATP-citrate synthase isoform 2 [Mus musculus] gi|21263374|sp|Q91V92|ACLY_MOUSE RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme gi|14193670|gb|AAK56080.1|AF332051_1 ATP citrate lyase [Mus musculus] gi|14193672|gb|AAK56081.1|AF332052_1 ATP citrate lyase [Mus musculus] gi|38614162|gb|AAH56378.1| ATP citrate lyase [Mus musculus] gi|123231523|emb|CAM27799.1| ATP citrate lyase [Mus musculus] gi|123236003|emb|CAM23025.1| ATP citrate lyase [Mus musculus] gi|148670609|gb|EDL02556.1| ATP citrate lyase, isoform CRA_b [Mus musculus] Length = 1091 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 480 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 539 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 540 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 720 GIKEGR---LTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 776 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 777 PRSFDELGEIIQSVYEDL 794 >gi|73965861|ref|XP_860980.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 4 [Canis familiaris] Length = 1089 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 478 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 537 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 538 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 597 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 598 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 657 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 658 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 717 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 718 GIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYV 774 Query: 283 APSPARIGRSLVELLGSL 300 PS +G + + L Sbjct: 775 PPSFDELGEIIQSVYEDL 792 >gi|603074|gb|AAB60340.1| ATP:citrate lyase [Homo sapiens] Length = 1101 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A + + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 550 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KPIV + G A GHAGA + A K A+KEAG+ + Sbjct: 730 GIKEGR---LTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 786 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 787 PRSFDELGEIIQSVYEDL 804 >gi|38569421|ref|NP_001087.2| ATP-citrate synthase isoform 1 [Homo sapiens] gi|116241237|sp|P53396|ACLY_HUMAN RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate (pro-S-)-lyase; Short=ACL; AltName: Full=Citrate cleavage enzyme gi|13623199|gb|AAH06195.1| ATP citrate lyase [Homo sapiens] gi|119581183|gb|EAW60779.1| ATP citrate lyase, isoform CRA_b [Homo sapiens] gi|119581185|gb|EAW60781.1| ATP citrate lyase, isoform CRA_b [Homo sapiens] gi|168270894|dbj|BAG10240.1| ATP-citrate synthase [synthetic construct] gi|325463509|gb|ADZ15525.1| ATP citrate lyase [synthetic construct] Length = 1101 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A + + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 550 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KPIV + G A GHAGA + A K A+KEAG+ + Sbjct: 730 GIKEGR---LTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 786 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 787 PRSFDELGEIIQSVYEDL 804 >gi|73965857|ref|XP_850198.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 2 [Canis familiaris] gi|73965885|ref|XP_861323.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 16 [Canis familiaris] gi|73965887|ref|XP_861351.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 17 [Canis familiaris] Length = 1101 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 550 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 730 GIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYV 786 Query: 283 APSPARIGRSLVELLGSL 300 PS +G + + L Sbjct: 787 PPSFDELGEIIQSVYEDL 804 >gi|73965873|ref|XP_861149.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 10 [Canis familiaris] Length = 1087 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 476 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 535 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 536 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 595 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 596 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 655 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 656 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 715 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 716 GIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYV 772 Query: 283 APSPARIGRSLVELLGSL 300 PS +G + + L Sbjct: 773 PPSFDELGEIIQSVYEDL 790 >gi|74146613|dbj|BAE41315.1| unnamed protein product [Mus musculus] Length = 1091 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 480 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 539 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 540 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 720 GIKEGR---LTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 776 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 777 PRSFDELGEIIQSVYEDL 794 >gi|73965869|ref|XP_861090.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 8 [Canis familiaris] Length = 1089 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 478 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 537 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 538 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 597 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 598 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 657 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 658 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 717 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 718 GIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYV 774 Query: 283 APSPARIGRSLVELLGSL 300 PS +G + + L Sbjct: 775 PPSFDELGEIIQSVYEDL 792 >gi|73965867|ref|XP_861064.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 7 [Canis familiaris] Length = 1103 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 492 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 551 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 552 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 611 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 612 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 671 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 672 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 731 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 732 GIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYV 788 Query: 283 APSPARIGRSLVELLGSL 300 PS +G + + L Sbjct: 789 PPSFDELGEIIQSVYEDL 806 >gi|73965879|ref|XP_861238.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 13 [Canis familiaris] Length = 1094 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 483 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 542 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 543 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 602 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 603 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 662 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 663 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 722 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 723 GIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYV 779 Query: 283 APSPARIGRSLVELLGSL 300 PS +G + + L Sbjct: 780 PPSFDELGEIIQSVYEDL 797 >gi|68533125|dbj|BAE06117.1| ACLY variant protein [Homo sapiens] Length = 1137 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 526 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 585 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A + + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 586 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 645 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 646 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 705 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 706 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 765 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KPIV + G A GHAGA + A K A+KEAG+ + Sbjct: 766 GIKEGR---LTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 822 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 823 PRSFDELGEIIQSVYEDL 840 >gi|73965883|ref|XP_861298.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 15 [Canis familiaris] Length = 1091 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 480 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 539 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 540 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 720 GIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVYV 776 Query: 283 APSPARIGRSLVELLGSL 300 PS +G + + L Sbjct: 777 PPSFDELGEIIQSVYEDL 794 >gi|38569423|ref|NP_942127.1| ATP-citrate synthase isoform 2 [Homo sapiens] gi|119581181|gb|EAW60777.1| ATP citrate lyase, isoform CRA_a [Homo sapiens] gi|119581182|gb|EAW60778.1| ATP citrate lyase, isoform CRA_a [Homo sapiens] Length = 1091 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 480 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 539 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A + + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 540 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KPIV + G A GHAGA + A K A+KEAG+ + Sbjct: 720 GIKEGR---LTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 776 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 777 PRSFDELGEIIQSVYEDL 794 >gi|300868660|ref|ZP_07113272.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Oscillatoria sp. PCC 6506] gi|300333354|emb|CBN58464.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Oscillatoria sp. PCC 6506] Length = 299 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 114/303 (37%), Positives = 168/303 (55%), Gaps = 16/303 (5%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + TKVLVQG+T + + T VV G+ P G G +PVF V + Sbjct: 3 LTPQTKVLVQGITESPASTQAALMMKAYGTNVVAGVSPGLGGQELHG----IPVFDLVEQ 58 Query: 65 AKERTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 A + SVI+V P DA +E+I A I IV +TEG+P LDMVR+ + E + + Sbjct: 59 ALSAFGKIDTSVIFVHPYSVLDAALEAIAAGIQQIVIVTEGVPPLDMVRLVRKAEATETL 118 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPNCPGI+ PD +G P + G VG++SRS TLTYE Q + LGQS V I Sbjct: 119 VVGPNCPGIIVPDKLLLGTHPSEFYTPGPVGLISRSNTLTYEIALQLTNAKLGQSIGVSI 178 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G D + G+ F+ L++ D++T++IV+VGE+G +EE AA ++ + KP++ ++ Sbjct: 179 GSDVIVGSSFMQWLQILDEDDSTDAIVLVGEVGSGSEEAAASYIAEAI----DKPVIAYI 234 Query: 244 AGKTAPPGRTMGHAGAVIS-------GGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 AG+ AP G+ +GHAG +IS G AE KI A +EA I +A ++I + + Sbjct: 235 AGRYAPKGQPLGHAGTLISSRAAVRTTEAGTAESKIAAFQEAKIPVAERISQIPELVKKA 294 Query: 297 LGS 299 L Sbjct: 295 LKK 297 >gi|325303392|tpg|DAA34114.1| TPA_exp: succinyl-CoA synthetase small subunit [Amblyomma variegatum] Length = 228 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 121/206 (58%), Positives = 157/206 (76%), Gaps = 6/206 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+ QG TGK GTFH++QA+ Y T++V G+ P KG G +PVF + Sbjct: 28 ALKINKDTKVICQGFTGKQGTFHSKQALEY-GTRLVAGVSPGKGGQTHLG----LPVFNS 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EA+ +T A+ASVIYVP GA AI+E++EAEIPL+VCITEGIP DMVRVK +L ++ Sbjct: 83 VKEARAQTGADASVIYVPAPGAAKAILEAMEAEIPLVVCITEGIPQQDMVRVKNQLVKQD 142 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +RL+GPNCPGI+ P+ CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS Sbjct: 143 KTRLVGPNCPGIIKPEECKIGIMPGHIHQKGKIGIVSRSGTLTYEAVHQTTQVGLGQSLC 202 Query: 181 VGIGGDPVKGTEFIDVLELFLADEAT 206 VGIGGDP G +FID +++FL D T Sbjct: 203 VGIGGDPFNGNKFIDCIDIFLGDPDT 228 >gi|74204023|dbj|BAE29010.1| unnamed protein product [Mus musculus] Length = 1034 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 550 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 730 GIKEGR---LTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 786 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 787 PRSFDELGEIIQSVYEDL 804 >gi|317486379|ref|ZP_07945207.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6] gi|316922368|gb|EFV43626.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6] Length = 293 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 109/301 (36%), Positives = 182/301 (60%), Gaps = 11/301 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSI + K+++V+VQG+TGK G F + + TQVV G+ P K G +PV+ Sbjct: 1 MSIFIHKDSRVVVQGVTGKEGAFWAKH-MKDMGTQVVFGVTPGKEGQDVDG----IPVYH 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V + A+ ++++VPP DA+ E+++A I I I +GIP+ + ++++ Sbjct: 56 SVRRGIKDHPADVAMLFVPPKFTKDAVFEALDAGIKKICTIADGIPLHEAIQIRRAALSC 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++G N GI++ +G +P +++KG VG+++RSG+LT E + + G G Sbjct: 116 GAMVVGGNTSGIISVGEAMLGTIPYWIDRVYKKGHVGVMTRSGSLTNEVTAEIVKGGFGV 175 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 +T +G+GGDPV GT F ++L L+ AD T ++V++GE+GG+ EEE A+ + K Sbjct: 176 TTLIGVGGDPVPGTRFAELLPLYEADPDTHAVVIIGELGGTMEEEVAEA---MEAKAFTK 232 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+V F+ G+TAP G+ MGHAGA+++GG+G + K A+ +AG +A P+ +G L LL Sbjct: 233 PLVAFMGGRTAPEGKRMGHAGAIVTGGRGTVKGKTEAIVKAGGKVAKRPSEVGALLKALL 292 Query: 298 G 298 G Sbjct: 293 G 293 >gi|194380758|dbj|BAG58532.1| unnamed protein product [Homo sapiens] Length = 1145 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 534 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 593 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A + + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 594 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 653 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 654 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 713 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 714 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 773 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KPIV + G A GHAGA + A K A+KEAG+ + Sbjct: 774 GIKEGR---LTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 830 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 831 PRSFDELGEIIQSVYEDL 848 >gi|218532111|ref|YP_002422927.1| CoA-binding protein [Methylobacterium chloromethanicum CM4] gi|218524414|gb|ACK84999.1| CoA-binding domain protein [Methylobacterium chloromethanicum CM4] Length = 301 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 119/294 (40%), Positives = 182/294 (61%), Gaps = 13/294 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I+ ++ +VLVQG+TGK GTF T++ + C TQVV G++PK+ G VPV+ T Sbjct: 2 IIYRQSARVLVQGITGKQGTFWTQKMME-CGTQVVAGVNPKRAGERHLG----VPVYATA 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 A + + +V+++PP+ A +A +++I+A +V +TE IP D++ + + + Sbjct: 57 KAAMAESPFDVAVMFIPPAMAREAALDAIQAGARTVVILTEHIPARDVMAIHHAAAQHGT 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSI---FRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R++GPN GI+TP +GIMPG F+ G+VG++SRSG+L ++ GLGQS Sbjct: 117 RIVGPNTAGIVTPGEGFVGIMPGHNPNIFQPGAVGVISRSGSLGTLICLNLTRAGLGQSA 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT D L+ D T ++V+VGEIGG+ EE AA + G KP+ Sbjct: 177 FLGIGGDPMIGTTTRDALQALDEDARTRAVVLVGEIGGAMEEAAADY-----AAGMSKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 V F+AG+ +PPG+ MGHAGA++SG G + K A++ AG+ +A +PA I R L Sbjct: 232 VSFIAGRASPPGKKMGHAGAIVSGTFGSYDGKRRALEAAGVAVADTPAEIPRLL 285 >gi|99034388|ref|ZP_01314404.1| hypothetical protein Wendoof_01000791 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 204 Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 131/209 (62%), Positives = 163/209 (77%), Gaps = 5/209 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K+T+++ QG TG GTFH+EQAI Y T++VGG+ P KG + +N+PVF Sbjct: 1 MSVLVNKDTRLICQGFTGAQGTFHSEQAIDY-GTKMVGGVTPGKGGSTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAKE+T ANA+VIYVP A AI+E+I+A+I LI+CITEGIP+LDMV+VK L S Sbjct: 56 TVAEAKEKTGANATVIYVPAKFAAAAILEAIDAKIELIICITEGIPILDMVKVKRALIGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+TP+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+ GLGQST Sbjct: 116 KSRLIGPNCPGIITPEECKIGIMPGHIHKRGHIGIMSRSGTLTYEAVAQTTAVGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESI 209 +GIGGDPV G F+D +ELFL D T I Sbjct: 176 IGIGGDPVHGITFVDCMELFLKDNDTHGI 204 >gi|284173631|ref|ZP_06387600.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus solfataricus 98/2] gi|261600985|gb|ACX90588.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus solfataricus 98/2] Length = 260 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 127/266 (47%), Positives = 172/266 (64%), Gaps = 7/266 (2%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 +L T++V G+ P KG T +VPV+ TV +A + A+AS+I+VP A DAI Sbjct: 1 MLKYGTKIVAGVTPGKGGTQVN----SVPVYDTVKDAMKEHEADASIIFVPAKYAVDAIY 56 Query: 89 ESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF 148 E+++A I LIV ITE IPVLDM + SR+IGPNCPGI+ P+ +GI+P F Sbjct: 57 EAVDAGIKLIVTITEHIPVLDMAKAIKYARARGSRIIGPNCPGIIAPEESLVGILPARAF 116 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 +KG +GI+SRSGTLTYE G+GQST +GIGGDP+ GT ++V ++F D TE Sbjct: 117 KKGKIGIVSRSGTLTYEVSELLKNHGMGQSTVIGIGGDPIIGTSILEVTKMFDQDPETEK 176 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 IV++GEIGG+ EE A+ K +R KKP++ ++AG TAP + MGHAGAV+ G G Sbjct: 177 IVVIGEIGGTMEERLAEAYK---RREIKKPVIAYIAGMTAPREKRMGHAGAVVYMGMGTF 233 Query: 269 EDKINAMKEAGICIAPSPARIGRSLV 294 E KI A KEAGI +A +P I + L+ Sbjct: 234 ESKIKAFKEAGIPVANTPYDIPKLLL 259 >gi|254461533|ref|ZP_05074949.1| succinyl-CoA synthase, alpha subunit [Rhodobacterales bacterium HTCC2083] gi|206678122|gb|EDZ42609.1| succinyl-CoA synthase, alpha subunit [Rhodobacteraceae bacterium HTCC2083] Length = 273 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 130/281 (46%), Positives = 174/281 (61%), Gaps = 13/281 (4%) Query: 21 GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPP 80 FHTE + Y V G + K G T VPVF TV EA E T A AS+++VPP Sbjct: 2 AQFHTEDMLEYGTNVVGGVVPGKGGETVHG-----VPVFDTVKEAVEATQAEASLVFVPP 56 Query: 81 SGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGPNCPGILTPD 136 A D+I+E+ +A I VCIT+GIP DM++VK + ++ L GPNC G ++P Sbjct: 57 PFAADSIMEAADAGIRYCVCITDGIPAQDMIQVKRYMMRYPKERRMVLTGPNCAGTISPG 116 Query: 137 SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 +GIMPG IF G+VGI+ RSGTL YEA Q + G+G ST+VGIGGDP+ G+ F D+ Sbjct: 117 KAMLGIMPGHIFLPGNVGIIGRSGTLGYEAAAQLKERGIGVSTSVGIGGDPINGSSFRDI 176 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGH 256 LE F DE T I M+GEIGG E EAA ++++ KP+V +VAG TAP GRTMGH Sbjct: 177 LEQFENDEDTHVIAMIGEIGGPQEAEAAAYIQEHV----TKPVVAYVAGLTAPKGRTMGH 232 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 AGA+IS A +K+ + AG+ +A +PA IG ++ ++ Sbjct: 233 AGAIISAFGESASEKVEILTAAGVTVAENPAVIGETIASVM 273 >gi|301773523|ref|XP_002922169.1| PREDICTED: ATP-citrate synthase-like [Ailuropoda melanoleuca] Length = 1101 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 144/318 (45%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 550 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +++ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 730 GIQEGR---LTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 786 Query: 283 APSPARIGRSLVELLGSL 300 PS +G + + L Sbjct: 787 PPSFDELGEIIQSVYEDL 804 >gi|325264239|ref|ZP_08130971.1| succinate-CoA ligase, alpha subunit [Clostridium sp. D5] gi|324030723|gb|EGB92006.1| succinate-CoA ligase, alpha subunit [Clostridium sp. D5] Length = 305 Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats. Identities = 123/296 (41%), Positives = 191/296 (64%), Gaps = 9/296 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+ K+T++L+ G+TGK G H Q L T+++ G+ P K G VPVF Sbjct: 1 MSILIHKDTEMLMIGITGKQGRIHC-QRTLESGTKLLAGVAPGKAGEEVNG----VPVFN 55 Query: 61 TVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TVA+A+ + ++++ VP DA I+++ + I L+V +TE +PV+D + + + +K Sbjct: 56 TVADARAQFPGIESALLIVPRQFVHDAAIDALHSGIKLLVIVTEFVPVMDTLHIVSEAKK 115 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +R++GPN G+++P KIGIMP I+ KG +GI+SRSGTLT+E + +G G ST Sbjct: 116 LGARIVGPNTIGVISPGQSKIGIMPDYIYGKGHIGIISRSGTLTHETASNLTFKGYGLST 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ G DV+ELF DE T++IV++GEIGG++EE AA +K+ G KKP+ Sbjct: 176 CIGIGGDPIIGMNHADVIELFAEDEDTDAIVIIGEIGGTSEEMAAAKIKEL---GLKKPV 232 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 ++AG AP + MGHAGA++SGG G + K+ A+++AG+ + P+ +I + E Sbjct: 233 YAYIAGMYAPENKKMGHAGAIVSGGMGTVKSKVAALEDAGVTVCPTLGKIVEFIEE 288 >gi|330982527|gb|EGH80630.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 226 Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats. Identities = 133/226 (58%), Positives = 166/226 (73%), Gaps = 4/226 (1%) Query: 73 ASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGI 132 ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ LIGPNCPG+ Sbjct: 1 ASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDELGVVLIGPNCPGV 60 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 +TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST VGIGGDP+ G+ Sbjct: 61 ITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTCVGIGGDPIPGSN 120 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K KP+V ++AG TAPPG+ Sbjct: 121 FIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVVSYIAGVTAPPGK 176 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 MGHAGA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 177 RMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 222 >gi|260814543|ref|XP_002601974.1| hypothetical protein BRAFLDRAFT_98927 [Branchiostoma floridae] gi|229287278|gb|EEN57986.1| hypothetical protein BRAFLDRAFT_98927 [Branchiostoma floridae] Length = 1097 Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats. Identities = 85/316 (26%), Positives = 140/316 (44%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L +N+K ++ G+ + G + VV +P K YW + +P Sbjct: 488 LFTENSKAIIWGMQNRAVQGMLDFDFCCSRKTPSVVAMTYPFSGDHKQKFYWGHKEILIP 547 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ + +A + T A+ + + A D+ +E+++ ++I I I EGIP ++ Sbjct: 548 VYKNMDDAMTKHTDADVLISFASLRSAYDSTVEALQYSQIRTIAIIAEGIPEAKTRQLNK 607 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 608 LASEKGVTVIGPATVGGIKPGCFKIGNTGGMLDNILSSKLYRPGSVAYVSRSGGMSNELN 667 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD GT F+D L + +D + +V++GE+GG+ E + + L Sbjct: 668 NIISRRTNGVYEGVAIGGDRYPGTTFMDHLIRYNSDPDVKMMVLLGEVGGTEEYKICEAL 727 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KPIV + G A GHAG+ A K A++ AG + Sbjct: 728 KD---GTITKPIVAWCIGTCASMFTSEVQFGHAGSSAHSDMETALAKNKALETAGAYVPT 784 Query: 285 SPARIGRSLVELLGSL 300 S +G + E+ L Sbjct: 785 SFDELGEKIQEVYEFL 800 >gi|194388336|dbj|BAG65552.1| unnamed protein product [Homo sapiens] Length = 830 Score = 235 bits (599), Expect = 7e-60, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 219 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 278 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A + + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 279 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 338 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 339 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 398 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 399 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 458 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KPIV + G A GHAGA + A K A+KEAG+ + Sbjct: 459 GIKEGR---LTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 515 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 516 PRSFDELGEIIQSVYEDL 533 >gi|254436023|ref|ZP_05049530.1| CoA binding domain protein [Nitrosococcus oceani AFC27] gi|207089134|gb|EDZ66406.1| CoA binding domain protein [Nitrosococcus oceani AFC27] Length = 222 Score = 235 bits (599), Expect = 7e-60, Method: Composition-based stats. Identities = 126/197 (63%), Positives = 152/197 (77%), Gaps = 5/197 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILVDK T+V+ QG TGK GTFH+ QA+ Y TQ+VGG+ P KG G PVF Sbjct: 1 MSILVDKQTRVICQGFTGKQGTFHSRQALEY-GTQLVGGVTPGKGGQTHLGQ----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA E T ANA++IYVP + A DAI+E+ + +PLIVCITEGIPVLDM+RVKA L Sbjct: 56 TVAEAVEATGANATMIYVPAAFAADAILEAADGGVPLIVCITEGIPVLDMLRVKAALAGL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 S L+GPNCPGI+TP +CKIGIMPG I + G +GI+SRSGTLTYEAV+QTS++GLGQST Sbjct: 116 PSYLVGPNCPGIITPGACKIGIMPGDIHQAGRIGIVSRSGTLTYEAVYQTSRKGLGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVL 197 VGIGGDP++G F+D L Sbjct: 176 VGIGGDPIQGMSFVDCL 192 >gi|149202195|ref|ZP_01879168.1| succinyl-CoA synthetase, alpha subunit [Roseovarius sp. TM1035] gi|149144293|gb|EDM32324.1| succinyl-CoA synthetase, alpha subunit [Roseovarius sp. TM1035] Length = 299 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 138/285 (48%), Positives = 182/285 (63%), Gaps = 8/285 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I V+ T+++VQG+TG++GTF+T++A+ Y T V G + P KG G +P+F Sbjct: 1 MAIFVNSETRLIVQGMTGRSGTFYTDEAMRYGTTCVGG-VRPGKGGARHLG----LPLFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA E T ANAS++ VP AG A+IE+IEA + ++VC+TE +P DM RVK L + Sbjct: 56 TVREAVEATQANASLVIVPAPQAGPAMIEAIEAGVSVVVCVTERVPQHDMSRVKQALAGT 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + LIGPN GILTP CKIG+MP G +GI SRS +LT E + Q S+ GLGQST Sbjct: 116 DTILIGPNSQGILTPGQCKIGVMPTVNAMPGHIGIASRSASLTSEILAQCSKAGLGQSTT 175 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VGIGGD + G F+D L+ F D TE++VM+GEIGG EEEAA + KP+V Sbjct: 176 VGIGGDTLHGVGFVDCLKAFRDDPETEAVVMIGEIGGRGEEEAAAY---LEAVDYGKPVV 232 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 V G+ AP GR MGHAG + G G A DKI ++ AG+ IA Sbjct: 233 ALVVGRHAPRGRRMGHAGTLSVLGGGTAADKIARLRGAGVEIATH 277 >gi|47210997|emb|CAF95829.1| unnamed protein product [Tetraodon nigroviridis] Length = 962 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 140/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L K TK +V G+ + G + Q V ++P K YW + Sbjct: 413 TTLFRKQTKAIVWGMQTRAVQGMLDFDYVCSRDQPSVTAMVYPFTGDHKQKFYWGHKEIL 472 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PV+ +A+A ++ + + + A D+ IE+++ ++I I I EGIP ++ Sbjct: 473 LPVYKNMADAMKKHPEVDVVISFASLRSAFDSTIEAMQYSQIHTIAIIAEGIPEAQTRKL 532 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 533 IKVADDKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 592 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGGS E + Q Sbjct: 593 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVIRYQDTPGIKMIVVLGEIGGSEEYKICQ 652 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+++AG + Sbjct: 653 GIKEGRI---TKPLVCWCIGTCATMFASEVQFGHAGACANQASETAVAKNQALRDAGAYV 709 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 710 PKSFDELGDVIKTVYDQL 727 >gi|119581184|gb|EAW60780.1| ATP citrate lyase, isoform CRA_c [Homo sapiens] Length = 628 Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 17 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 76 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A + + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 77 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 136 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 137 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 196 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 197 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 256 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KPIV + G A GHAGA + A K A+KEAG+ + Sbjct: 257 GIKEGR---LTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 313 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 314 PRSFDELGEIIQSVYEDL 331 >gi|149723798|ref|XP_001495696.1| PREDICTED: ATP citrate lyase isoform 1 [Equus caballus] Length = 1101 Score = 234 bits (598), Expect = 9e-60, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 550 IPVFKNMADAMKKHPEVDVLISFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADQRGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +++ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 730 GIQEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 786 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 787 PRSFDELGEIIQSVYEDL 804 >gi|84490419|ref|NP_001033711.1| ATP-citrate synthase [Ovis aries] gi|121957977|sp|Q2TCH3|ACLY_SHEEP RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme gi|63364938|gb|AAY40742.1| ATP-citrate lyase [Ovis aries] Length = 1101 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 83/318 (26%), Positives = 141/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ +I I I EGIP ++ Sbjct: 550 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYTQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + E+ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKAEQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 + + KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 730 GVTEGRI---TKPVVCWCIGTCAAMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 786 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 787 PRSFDELGEIIQSVYEDL 804 >gi|296202905|ref|XP_002748671.1| PREDICTED: ATP-citrate synthase [Callithrix jacchus] Length = 1091 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 141/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 480 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 539 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRV 113 +PVF +A+A + + + + A D+ +E++ +I I I EGIP ++ Sbjct: 540 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYTQIRTIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVFEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KPIV + G A GHAGA + A K A+KEAG+ + Sbjct: 720 GIKEGR---LTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 776 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 777 PQSFDELGEIIQSVYEDL 794 >gi|149723800|ref|XP_001495733.1| PREDICTED: ATP citrate lyase isoform 2 [Equus caballus] Length = 1091 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 480 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 539 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 540 IPVFKNMADAMKKHPEVDVLISFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKKADQRGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +++ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 720 GIQEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 776 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 777 PRSFDELGEIIQSVYEDL 794 >gi|281344523|gb|EFB20107.1| hypothetical protein PANDA_011141 [Ailuropoda melanoleuca] Length = 1086 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 144/318 (45%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ A+I I I EGIP ++ Sbjct: 550 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNYAQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +++ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 730 GIQEGR---LTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 786 Query: 283 APSPARIGRSLVELLGSL 300 PS +G + + L Sbjct: 787 PPSFDELGEIIQSVYEDL 804 >gi|284052712|ref|ZP_06382922.1| succinyl-CoA synthetase alpha chain [Arthrospira platensis str. Paraca] gi|291567702|dbj|BAI89974.1| succinyl-CoA synthetase alpha chain [Arthrospira platensis NIES-39] Length = 301 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 104/302 (34%), Positives = 166/302 (54%), Gaps = 15/302 (4%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + ++KV++QGL + + T +V + +G +PV+ V + Sbjct: 3 LTPDSKVIIQGLRDSDPSLKVALNMKAYSTNIVACVSAGRGGEIIH----QIPVYDLVEQ 58 Query: 65 AKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 A+ + SVI V P DA +E+I+A I +V +TEG+P LDMVR+ + E + + Sbjct: 59 AQAAVGPVDTSVILVHPYDVLDAALEAIDAGIRQLVIVTEGMPPLDMVRLVRKAEATETL 118 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPNCPGI+ P +G P + GS+G++SRS TLTYE + LGQS +V I Sbjct: 119 VVGPNCPGIIVPGKLLLGTHPPQFYTPGSIGLISRSSTLTYEVAQALTDAKLGQSLSVCI 178 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G D + G+ FI L++ D+ T++IV+VGEIGGS+EEEAA ++ + KP+V ++ Sbjct: 179 GSDLIVGSSFIQWLQILDEDDHTDAIVLVGEIGGSSEEEAASYIAE----TIDKPVVAYI 234 Query: 244 AGKTAPPGRTMGHAGAVISGG------KGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G AP + + HA +I+ G A+ KI+ ++A I +A SP++I L + L Sbjct: 235 TGLHAPKAQLISHASTIITSKFTQDLHPGTAQSKISVFEKAKIPVASSPSQIPELLKKCL 294 Query: 298 GS 299 Sbjct: 295 KK 296 >gi|119493951|ref|ZP_01624512.1| succinyl-CoA synthetase alpha chain [Lyngbya sp. PCC 8106] gi|119452308|gb|EAW33503.1| succinyl-CoA synthetase alpha chain [Lyngbya sp. PCC 8106] Length = 297 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 168/303 (55%), Gaps = 16/303 (5%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + +KVL+QG H + T +V + P +G TY VP+F V + Sbjct: 3 LTSESKVLIQGNAASQALIHAVLNMKAYGTNIVACVTPGQGGTYLE----EVPIFDLVEQ 58 Query: 65 AKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 A+ + + SVI+V P A D+ +E+IEA + +V +TEG+P LDMV + + E S + Sbjct: 59 AQAKVGPIDTSVIWVNPYQALDSALEAIEAGVKQLVILTEGMPPLDMVCLIRKAEISETL 118 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 +IGP+C GI+ P+ +G+ PG + GS+G++SR LTYE Q +Q LGQS ++ I Sbjct: 119 IIGPSCAGIIVPNQLLLGLHPGEFYTPGSIGLISRGSRLTYEIASQLTQAKLGQSMSISI 178 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G D + G+ FI L++ D+ TE+IV+VGE+ G+ EEEAA ++ + KP++ ++ Sbjct: 179 GSDLIIGSSFIQWLQILDEDDQTEAIVLVGEVSGTGEEEAASYIAE----TIDKPVIAYI 234 Query: 244 AGKTAPPGRTMGHAGAVISGGK-------GGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 AG APP + +GH+ + + E KI A K+A I +A P++I + + Sbjct: 235 AGLYAPPTQMLGHSCTLATSKLLAQTICPPTIESKIEAFKKAKIPLADRPSQIPGLIKKA 294 Query: 297 LGS 299 L Sbjct: 295 LKK 297 >gi|119510292|ref|ZP_01629428.1| CoA-binding [Nodularia spumigena CCY9414] gi|119465036|gb|EAW45937.1| CoA-binding [Nodularia spumigena CCY9414] Length = 299 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 98/297 (32%), Positives = 164/297 (55%), Gaps = 15/297 (5%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + ++KVL+QG + H Q Y T +V G++P G N+P+F V E Sbjct: 3 LTPDSKVLIQGFSEFISATHIAQMKAY-GTNLVAGVNPGCGGQ----KLHNLPIFDLVEE 57 Query: 65 AKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 + A + ++I V P DA +E+I I I+ IT G+P LDMV++ + E + Sbjct: 58 VVAKFGAIDTAIICVHPYQVLDAALEAIACNINQIIIITGGVPPLDMVQLLRKAETGETL 117 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GP PGI+ P +G P ++ G+VGI+SRS TLTYE ++ ++ GLGQS +V I Sbjct: 118 IVGPYSPGIIVPGKILLGTQPSELYTPGTVGIVSRSSTLTYEVAWELTKAGLGQSISVSI 177 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G D + G+ F+ L++ D+ T++IV+VG+ GG +EE AA+++ + KP++ ++ Sbjct: 178 GSDAIVGSSFLQWLQILDEDDTTQAIVLVGQPGGDSEEAAARYIIEAI----DKPVIAYI 233 Query: 244 AGKTAPPGRTMGHAGAVIS-----GGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 AG+ AP + +G + + G A+ K+ A KEA + +A P+ I + + Sbjct: 234 AGRHAPRAKNWRQSGTLATVIGRDPNFGTAQSKLAAFKEAKVPVAERPSLIPELVKK 290 >gi|17231405|ref|NP_487953.1| succinyl-CoA synthetase alpha chain [Nostoc sp. PCC 7120] gi|17133047|dbj|BAB75612.1| succinyl-CoA synthetase alpha chain [Nostoc sp. PCC 7120] Length = 293 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 101/299 (33%), Positives = 161/299 (53%), Gaps = 15/299 (5%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + ++KV++QG H Q Y T +V G+ P G ++PVF V E Sbjct: 3 LTPDSKVIIQGFHEFISENHIAQMKAY-GTNLVAGVQPGYGGQ----ELYHLPVFDLVEE 57 Query: 65 AKERTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 + + ++I V P DA +E+I + I I+ I+ G+P LDMV + + E + Sbjct: 58 VVGQFGSIDTTIICVHPYQVLDAALEAIASHIRQIIIISAGVPPLDMVELLRKAEAGETL 117 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPN PGI+ P +G P + G VGI+SRS TLTYE + +Q G GQS +V I Sbjct: 118 VVGPNSPGIIVPGKILLGTQPSEFYTPGVVGIVSRSSTLTYEVARELTQAGWGQSISVSI 177 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G D + G+ F+ L++ DE TE+IV+VG+ GG +EE AA+++ + KP++ ++ Sbjct: 178 GSDAIVGSSFLQWLQILDEDETTEAIVLVGQPGGGSEEAAARYIAEAI----DKPVIAYI 233 Query: 244 AGKTAPPGRTMGHAGAVIS-----GGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 AG+ APPG+T G + + G A+ KI A + A + +A P+ I + L + + Sbjct: 234 AGRQAPPGKTWRQTGTLATVVGRPPNFGTAQSKITAFEAAEVPVAERPSLIPQLLKKAI 292 >gi|126307954|ref|XP_001364183.1| PREDICTED: similar to ATP citrate lyase isoform 1 [Monodelphis domestica] Length = 1101 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 143/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 TTLFSRHTKAIVWGMQTRAVQGMLDFDYICSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 550 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + Q Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICQ 729 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 730 SVKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 786 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 787 PWSFDELGEIIQNVYEDL 804 >gi|75908005|ref|YP_322301.1| succinyl-CoA synthetase (ADP-forming)subunit alpha [Anabaena variabilis ATCC 29413] gi|75701730|gb|ABA21406.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Anabaena variabilis ATCC 29413] Length = 293 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 101/299 (33%), Positives = 161/299 (53%), Gaps = 15/299 (5%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + ++KV++QG H Q Y T +V G+ P G ++PVF V E Sbjct: 3 LTPDSKVIIQGFHEFISENHIAQMKAY-GTNLVAGVQPGYGGQ----ELYHLPVFDLVEE 57 Query: 65 AKERTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 + + ++I V P DA +E+I + I I+ I+ G+P LDMV + + E + Sbjct: 58 VVGQFGSIDTTIICVHPYQVLDAALEAIASHIRQIIIISAGVPPLDMVELLRKAEAGETL 117 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPN PGI+ P +G P + G VGI+SRS TLTYE + +Q G GQS +V I Sbjct: 118 VVGPNSPGIIVPGKILLGTQPSEFYTPGVVGIVSRSSTLTYEVARELTQAGWGQSISVSI 177 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G D + G+ F+ L++ DE TE+IV+VG+ GG +EE AA+++ + KP++ ++ Sbjct: 178 GSDAIVGSSFLQWLQILDEDETTEAIVLVGQPGGGSEEAAARYITEAI----DKPVIAYI 233 Query: 244 AGKTAPPGRTMGHAGAVIS-----GGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 AG+ APPG+T G + + G A+ KI A + A + +A P+ I + L + + Sbjct: 234 AGRQAPPGKTWRQTGTLATVVGRPPNFGTAQSKITAFEAAEVPVAERPSLIPQLLKKAI 292 >gi|126307956|ref|XP_001364262.1| PREDICTED: similar to ATP citrate lyase isoform 2 [Monodelphis domestica] Length = 1091 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 143/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 480 TTLFSRHTKAIVWGMQTRAVQGMLDFDYICSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 539 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 540 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKKADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + Q Sbjct: 660 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICQ 719 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 720 SVKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 776 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 777 PWSFDELGEIIQNVYEDL 794 >gi|17028103|gb|AAL34316.1| ATP-citrate lyase [Rattus norvegicus] Length = 851 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 240 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 299 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 300 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 359 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 360 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 419 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 420 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 479 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 480 GIKEGR---LTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 536 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 537 PRSFDELGEIIQSVYEDL 554 >gi|238618771|ref|YP_002913596.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus M.16.4] gi|238379840|gb|ACR40928.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus M.16.4] Length = 260 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 128/266 (48%), Positives = 170/266 (63%), Gaps = 7/266 (2%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 +L T++V G+ P KG T NVPV+ TV +A + A+ S+I+VP A DAI Sbjct: 1 MLKYGTKIVAGVTPGKGGTQVN----NVPVYDTVKDAMKEHEADTSIIFVPARYAVDAIY 56 Query: 89 ESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF 148 E+++A I LIV ITE IPVLDM R +R+IGPNCPGI+ P+ +GI+P F Sbjct: 57 EAVDAGIKLIVTITEHIPVLDMARAIKYARARGARIIGPNCPGIIAPEESLVGILPARAF 116 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 +KG +GI+SRSGTLTYE G+GQST +GIGGDP+ GT ++V ++F D TE Sbjct: 117 KKGKIGIVSRSGTLTYEVSELLKNSGMGQSTVIGIGGDPIIGTSTLEVAKMFDQDPETEK 176 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 IV++GEIGG+ EE A+ K + KKPI+ ++AG TAP + MGHAGAV+ G G Sbjct: 177 IVVIGEIGGTMEERLAEAYK---RGEIKKPIIAYIAGMTAPREKRMGHAGAVVYMGMGTF 233 Query: 269 EDKINAMKEAGICIAPSPARIGRSLV 294 E KI A KEAGI IA +P I + L+ Sbjct: 234 ESKIRAFKEAGIPIANTPYDIPKLLL 259 >gi|88601415|ref|YP_501593.1| succinyl-CoA synthetase, subunit alpha [Methanospirillum hungatei JF-1] gi|88186877|gb|ABD39874.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methanospirillum hungatei JF-1] Length = 288 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 123/296 (41%), Positives = 181/296 (61%), Gaps = 16/296 (5%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILY----CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 I DK T V+V G TG G+FH ++ Y VV G+ P KG G VPV Sbjct: 2 IYADKKTGVIVCGATGNQGSFHIDRMNQYARSIGGRGVVAGVTPGKGGQEVHG----VPV 57 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + ++ EA E A A+V++VP S AGD+I+E+ +A + L+V ITE IPV D++ + Sbjct: 58 YNSILEAAEAQNATAAVLFVPGSAAGDSIMEAADAGLDLVVTITEHIPVHDVMHAVTYAQ 117 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +IGPNCPG+ +P +GIMP + +G VG++SRSGTLTYE V + ++ G+GQS Sbjct: 118 MRDCTVIGPNCPGLFSPGEISMGIMPAHLATRGPVGVISRSGTLTYEVVHELTRAGIGQS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + +GIGGDP+ G F DVLE F D T+++V++GE+GG+ EEE A+ + P Sbjct: 178 SIIGIGGDPIIGQTFADVLERFAEDPLTKAVVILGELGGNLEEEGAR--------SAELP 229 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 +V F+AG TAP + MGHAGA+++GG+G A KI +++ G+ +A + I + Sbjct: 230 VVAFIAGTTAPAEKRMGHAGAIVTGGEGDANAKIARLRDLGVPVADRLSEIPAMIR 285 >gi|227826684|ref|YP_002828463.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus M.14.25] gi|227458479|gb|ACP37165.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus M.14.25] gi|323473765|gb|ADX84371.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus REY15A] gi|323476415|gb|ADX81653.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus HVE10/4] Length = 260 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 128/266 (48%), Positives = 171/266 (64%), Gaps = 7/266 (2%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 +L T++V G+ P KG T NVPV+ TV +A + A+ S+I+VP A DAI Sbjct: 1 MLKYGTKIVAGVTPGKGGTQVN----NVPVYDTVKDAMKEHEADTSIIFVPARYAVDAIY 56 Query: 89 ESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF 148 E+++A I LIV ITE IPVLDM R + +R+IGPNCPGI+ P+ +GI+P F Sbjct: 57 EAVDAGIKLIVTITEHIPVLDMARAIKYAKARGARIIGPNCPGIIAPEESLVGILPARAF 116 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 +KG +GI+SRSGTLTYE G+GQST +GIGGDP+ GT ++V ++F D TE Sbjct: 117 KKGKIGIVSRSGTLTYEVSELLKNSGMGQSTVIGIGGDPIIGTSTLEVAKMFDQDPETEK 176 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 IV++GEIGG+ EE A+ K + KKPI+ ++AG TAP + MGHAGAV+ G G Sbjct: 177 IVVIGEIGGTMEERLAEAYK---RGEIKKPIIAYIAGMTAPREKRMGHAGAVVYMGMGTF 233 Query: 269 EDKINAMKEAGICIAPSPARIGRSLV 294 E KI A KEAGI IA +P I + L+ Sbjct: 234 ESKIRAFKEAGIPIANTPYDIPKLLL 259 >gi|56118260|ref|NP_001008028.1| ATP citrate lyase [Xenopus (Silurana) tropicalis] gi|51703371|gb|AAH80908.1| acly protein [Xenopus (Silurana) tropicalis] Length = 1091 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 141/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L +++TK +V G+ + G + + V ++P K YW + Sbjct: 480 TTLFNRHTKSIVWGMQTRAVQGMLDFDYICSRSEPSVAALVYPFTGDHKQKFYWGHKEIL 539 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A + + + + A D+ IE++ +I I I EGIP ++ Sbjct: 540 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTIETMNYPQIRSIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKMADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVFEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KPIV + G A GHAGA + A K A+KEAG+ + Sbjct: 720 GIKEGR---LTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 776 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 777 PRSFDELGDVIQSVYEDL 794 >gi|167042622|gb|ABZ07344.1| putative CoA-binding domain protein [uncultured marine crenarchaeote HF4000_ANIW133K13] Length = 282 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 112/288 (38%), Positives = 166/288 (57%), Gaps = 8/288 (2%) Query: 12 LVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAA 71 +VQG+TGK GT HT+ + Y T + G+ P KG + +VP++ T+ EA + A Sbjct: 2 IVQGITGKFGTVHTKLMLEY-GTNIAAGVTPGKGGQKF----QDVPIYETMKEAIAASKA 56 Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPG 131 S+++VP +A E+ EA I L+V I E +PV D++ +++ + +IGPN PG Sbjct: 57 KISIVFVPAKFFLEAAKEAFEAGIKLLVAIPEYVPVRDVMLAIEIAKQNDAMMIGPNTPG 116 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P KIGIMP S F +G + +LS+SGTL YE + G GQ+ +GIGGD + GT Sbjct: 117 VIIPGLIKIGIMPASPFMQGKIAVLSKSGTLLYEISNNLTTSGFGQNVTLGIGGDSINGT 176 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +D ++ E +V+VGEIGG AEE A+ + D G KKP+VG++AG+ AP Sbjct: 177 TMVDAFDMIKDQPELEGVVIVGEIGGQAEETLAEHIID---IGFKKPVVGYIAGRKAPKE 233 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 + MGHAGA++ G G AE KI +A I +A P + L + Sbjct: 234 KRMGHAGAIVMGNYGSAESKIAMFAKANIPVAKRPTEVPILLAGKMEK 281 >gi|15899223|ref|NP_343828.1| succinyl-CoA synthetase, alpha subunit (sucD) [Sulfolobus solfataricus P2] gi|227829322|ref|YP_002831101.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus L.S.2.15] gi|229578095|ref|YP_002836493.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus Y.G.57.14] gi|229583307|ref|YP_002841706.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus Y.N.15.51] gi|284996681|ref|YP_003418448.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus L.D.8.5] gi|13815783|gb|AAK42618.1| Succinyl-CoA synthetase, alpha subunit (sucD) [Sulfolobus solfataricus P2] gi|227455769|gb|ACP34456.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus L.S.2.15] gi|228008809|gb|ACP44571.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus Y.G.57.14] gi|228014023|gb|ACP49784.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus Y.N.15.51] gi|284444576|gb|ADB86078.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus L.D.8.5] Length = 260 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 128/266 (48%), Positives = 171/266 (64%), Gaps = 7/266 (2%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 +L T++V G+ P KG T +VPV+ TV +A + A+AS+I+VP A DAI Sbjct: 1 MLKYGTKIVAGVTPGKGGTQVN----SVPVYDTVKDAMKEHEADASIIFVPARYAVDAIY 56 Query: 89 ESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF 148 E+++A I LIV ITE IPVLDM R +R+IGPNCPGI+ P+ +GI+P F Sbjct: 57 EAVDAGIKLIVTITEHIPVLDMARAIKYARARGARIIGPNCPGIIAPEESLVGILPARAF 116 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 +KG +GI+SRSGTLTYE G+GQST +GIGGDP+ GT ++V ++F D TE Sbjct: 117 KKGKIGIVSRSGTLTYEVSELLKNSGMGQSTVIGIGGDPIIGTSTLEVAKMFDQDPETEK 176 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 IV++GEIGG+ EE A+ K + KKPI+ ++AG TAP + MGHAGAV+ G G Sbjct: 177 IVVIGEIGGTMEERLAEAYK---RGEIKKPIIAYIAGMTAPREKRMGHAGAVVYMGMGTF 233 Query: 269 EDKINAMKEAGICIAPSPARIGRSLV 294 E KI A KEAGI IA +P I + L+ Sbjct: 234 ESKIRAFKEAGIPIANTPYDIPKLLL 259 >gi|229583848|ref|YP_002842349.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus M.16.27] gi|228018897|gb|ACP54304.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfolobus islandicus M.16.27] Length = 260 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 127/266 (47%), Positives = 170/266 (63%), Gaps = 7/266 (2%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 +L T++V G+ P KG T +VPV+ TV +A + A+ S+I+VP A DAI Sbjct: 1 MLKYGTKIVAGVTPGKGGTQVN----SVPVYDTVKDAMKEHEADTSIIFVPARYAVDAIY 56 Query: 89 ESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF 148 E+++A I LIV ITE IPVLDM R +R+IGPNCPGI+ P+ +GI+P F Sbjct: 57 EAVDAGIKLIVTITEHIPVLDMARAIKYARARGARIIGPNCPGIIAPEESLVGILPARAF 116 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 +KG +GI+SRSGTLTYE G+GQST +GIGGDP+ GT ++V ++F D TE Sbjct: 117 KKGKIGIVSRSGTLTYEVSELLKNSGMGQSTVIGIGGDPIIGTSTLEVAKMFDQDPETEK 176 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 IV++GEIGG+ EE A+ K + KKPI+ ++AG TAP + MGHAGAV+ G G Sbjct: 177 IVVIGEIGGTMEERLAEAYK---RGEIKKPIIAYIAGMTAPREKRMGHAGAVVYMGMGTF 233 Query: 269 EDKINAMKEAGICIAPSPARIGRSLV 294 E KI A KEAGI IA +P I + L+ Sbjct: 234 ESKIKAFKEAGIPIANTPYDIPKLLL 259 >gi|82697335|ref|NP_001032534.1| ATP-citrate synthase [Bos taurus] gi|121957975|sp|Q32PF2|ACLY_BOVIN RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme gi|79158721|gb|AAI08139.1| ATP citrate lyase [Bos taurus] gi|296476337|gb|DAA18452.1| ATP citrate lyase [Bos taurus] Length = 1091 Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats. Identities = 83/318 (26%), Positives = 142/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 480 ATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 539 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 540 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTAGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 + + KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 720 GVTEGRI---TKPVVCWCIGTCAAMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 776 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 777 PRSFDELGEIIQSVYEDL 794 >gi|167518137|ref|XP_001743409.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778508|gb|EDQ92123.1| predicted protein [Monosiga brevicollis MX1] Length = 1085 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 88/313 (28%), Positives = 130/313 (41%), Gaps = 16/313 (5%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ L G+ + G + + V G I+P G YW V +P Sbjct: 470 LFTNKTRALFFGMQPRAAQGMLDFDFCCGREEPSVAGMIYPFSGNHSQKFYWGSNEVLIP 529 Query: 58 VFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 VF + EA ER + + + A ++ +E++E +I +I I EGIP ++ Sbjct: 530 VFQQMGEAMERHPDVDVLINFASFRSAYESTLEALEYPQIKVIAIIAEGIPEHLTRKLIK 589 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 590 VAQAKGVTIIGPATVGGIKPGCFKIGNTGGMIDNIISSKLYRPGSVAYVSRSGGMSNELN 649 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ FID L F D + +V++GE+GG E E + + Sbjct: 650 NIISRNTNGVYEGVAIGGDRYPGSVFIDHLFRFQDDPEVKMMVLLGEVGGVEEYEICRAI 709 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 G GHAGA + A K A+KEAG + PS Sbjct: 710 ASGRLNKPIVAWCIGTCGSMFTSEVQFGHAGACANSDMETAVAKNKALKEAGAIVPPSFD 769 Query: 288 RIGRSLVELLGSL 300 +G L E L Sbjct: 770 SLGDVLKETYDRL 782 >gi|326934166|ref|XP_003213165.1| PREDICTED: ATP-citrate synthase-like isoform 1 [Meleagris gallopavo] Length = 1091 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVN 55 + L ++TK ++ G+ + G + + V ++P G YW + Sbjct: 480 TTLFSRHTKAIIWGMQTRAVQGMLDFDYICSRDEPSVAAMVYPFTGDHRQKFYWGHKEIL 539 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PV+ +++A + + + + A D+ +E++ +I I I EGIP ++ Sbjct: 540 IPVYKNMSDAMRKHPEVDVLINFASLRSAYDSTVETMNYPQIRTIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKAADKKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVYEGVAIGGDRYPGSAFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 720 GIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 776 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 777 PRSFDELGEVIQSVYQDL 794 >gi|326934168|ref|XP_003213166.1| PREDICTED: ATP-citrate synthase-like isoform 2 [Meleagris gallopavo] Length = 1101 Score = 232 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVN 55 + L ++TK ++ G+ + G + + V ++P G YW + Sbjct: 490 TTLFSRHTKAIIWGMQTRAVQGMLDFDYICSRDEPSVAAMVYPFTGDHRQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PV+ +++A + + + + A D+ +E++ +I I I EGIP ++ Sbjct: 550 IPVYKNMSDAMRKHPEVDVLINFASLRSAYDSTVETMNYPQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKAADKKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSAFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 730 GIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 786 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 787 PRSFDELGEVIQSVYQDL 804 >gi|321461384|gb|EFX72417.1| hypothetical protein DAPPUDRAFT_308310 [Daphnia pulex] Length = 1074 Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats. Identities = 84/316 (26%), Positives = 135/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L TK +V G+ + + + V ++P K YW G V + Sbjct: 465 LFTSETKAIVWGMQTRAVQSMLDFDFVCRRKEPSVAAMVYPFTGDHKQKFYWGHGEVFIS 524 Query: 58 VFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ ++ +A ++ A+ V + A D+ +E++ +I I I EGIP ++ Sbjct: 525 VYKSMDDAMKKHPTADVMVNFASLRSAYDSTVEAMNYPQIRTIAIIAEGIPENSTRKLNK 584 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 585 LAASKNVAIIGPATVGGIKPGCLKIGNTGGMMDNILHSKLYRPGSVAYVSRSGGMSNELN 644 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + G V IGGD GT FID L + D + +V++GE+GG E + + L Sbjct: 645 NIIAHHSNGVCEGVAIGGDRYPGTTFIDHLLRYQNDPEVKMLVLLGEVGGVEEYDVCRAL 704 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 D KPI+ + G A GHAGA + + A K A+ EAG + Sbjct: 705 TDGRI---TKPIIAWCIGTCASMFSSEVQFGHAGACANAERETALAKNKALAEAGGHVPQ 761 Query: 285 SPARIGRSLVELLGSL 300 S +G + ++ L Sbjct: 762 SFDDLGEVIEKVYKQL 777 >gi|327275431|ref|XP_003222477.1| PREDICTED: LOW QUALITY PROTEIN: ATP-citrate synthase-like [Anolis carolinensis] Length = 1101 Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats. Identities = 82/318 (25%), Positives = 141/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ +E++ +I + I EGIP R+ Sbjct: 550 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYPQIRTVAIIAEGIPEPLTRRL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKMADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVFEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KE G+ + Sbjct: 730 GVKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEVGVFV 786 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + +L Sbjct: 787 PRSFDELGDVIQSVYEAL 804 >gi|21754275|dbj|BAC04484.1| unnamed protein product [Homo sapiens] Length = 701 Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 90 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 149 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A + + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 150 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 209 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 210 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 269 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 270 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 329 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KPIV + G A GHAGA + A K A+KEAG+ + Sbjct: 330 GIKEGR---LTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 386 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 387 PRSFDELGEIIQSVYEDL 404 >gi|294714385|gb|ADF30395.1| CG6255 [Drosophila mauritiana] Length = 229 Score = 231 bits (590), Expect = 8e-59, Method: Composition-based stats. Identities = 131/234 (55%), Positives = 172/234 (73%), Gaps = 6/234 (2%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 ++K+TK++V G TGK TFH+E++I Y T +VGG++PKKG T G PVF +V E Sbjct: 1 INKSTKLIVHGFTGKQATFHSEESIKY-GTNIVGGVNPKKGGTEHLGK----PVFKSVEE 55 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSR 123 A E+T +A+VI++PP A + I +IE+EI LIV ITEGIP DMVR+ L + SR Sbjct: 56 AVEKTKPDATVIFIPPPSAAEGICAAIESEIGLIVAITEGIPQSDMVRISQMLNCQEKSR 115 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPNCPGI++PD CKIGIMPG I ++G VGI+SRSGTLTYE+V QT+ GLGQ+ VG+ Sbjct: 116 LLGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALCVGL 175 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 GGDP GT FID L++FL+D+ + IVM+GEIGGSAEE+AA FLK++ K Sbjct: 176 GGDPFNGTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEDAADFLKEKNTGCEAK 229 >gi|71896389|ref|NP_001025711.1| ATP-citrate synthase [Gallus gallus] gi|60098703|emb|CAH65182.1| hypothetical protein RCJMB04_6f14 [Gallus gallus] Length = 1101 Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats. Identities = 81/318 (25%), Positives = 139/318 (43%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVN 55 + L ++TK ++ G+ + G + + V ++P G YW + Sbjct: 490 TTLFSRHTKAIIWGMQTRAVQGMLDFDYICSRDEPSVAAMVYPFTGDHRQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PV+ +++A + + + + A D+ +E++ +I I I EGIP ++ Sbjct: 550 IPVYKNMSDAMRKHPEVDVLINFASLRSAYDSTVETMNYPQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 +K IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKAADKKGVTNIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 730 GIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 786 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 787 PRSFDELGEVIQSVYQDL 804 >gi|302566700|gb|ADL41159.1| ATP-citrate lyase [Anser anser anser] Length = 1091 Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats. Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVN 55 + L ++TK ++ G+ + G + + V ++P G YW + Sbjct: 480 TTLFSRHTKAIIWGMQTRAVQGMLDFDYICSRDEPSVAAMVYPFTGDHRQKFYWGHKEIL 539 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PV+ +++A + + + + A D+ +E++ +I I I EGIP ++ Sbjct: 540 IPVYKNMSDAMRKHPEVDVLINFASLRSAYDSTVETMNYPQIRTIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKAADKKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A+KEAG+ + Sbjct: 720 GVKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 776 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 777 PRSFDELGEVIQSVYQDL 794 >gi|113476346|ref|YP_722407.1| succinyl-CoA synthetase subunit alpha [Trichodesmium erythraeum IMS101] gi|110167394|gb|ABG51934.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Trichodesmium erythraeum IMS101] Length = 290 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 106/296 (35%), Positives = 165/296 (55%), Gaps = 12/296 (4%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + K +KV+VQG+T K T + C T VV GI P +G W G +PVF+ V + Sbjct: 4 LTKYSKVIVQGVTEKIST-QIALTMRSCGTNVVAGISPGEGGEEWLG----IPVFSLVEQ 58 Query: 65 AKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 A + + SVI +P DA +E+I + + IV ITEG+P LDMV++ + E + + Sbjct: 59 AVAKMGVIDTSVIVMPAYQVLDAALEAITSGLKQIVIITEGVPPLDMVKLLRKAETTETL 118 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPNC GI+ P+ +G P + G +GI+SRS TLTYE ++ ++ LGQS V + Sbjct: 119 IVGPNCAGIIIPEKLLLGTHPTQFYTPGPIGIISRSNTLTYEVAWELTRSRLGQSICVSL 178 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G DP+ G+ F+ L++ D+ TE IV+VGE+GG AEE AA ++ + KP++ ++ Sbjct: 179 GCDPIVGSSFLQWLQILDEDDQTELIVLVGEVGGVAEELAASYISE----TIDKPVIAYI 234 Query: 244 AGKTAPPGRTMGHAGAVISGG--KGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 AG AP + +IS + ++ A + A I +A P+ I + LL Sbjct: 235 AGTCAPINQNYSPVNCLISNKVVREIESERTGAFEGANIPVAKRPSDIPSLVRNLL 290 >gi|237803498|ref|ZP_04591083.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025480|gb|EGI05536.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. oryzae str. 1_6] Length = 196 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 117/201 (58%), Positives = 145/201 (72%), Gaps = 5/201 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T +N+PVF Sbjct: 1 MSVLINKDTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTH----LNLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA + T A ASVIYVP D+I+E+ I LIVCITEGIP +DM+ K + ++ Sbjct: 56 TVKEAVDTTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDEL 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPNCPG++TP CKIGIMPG I G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVVLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTC 175 Query: 181 VGIGGDPVKGTEFIDVLELFL 201 VGIGGDP+ G+ FID+L+LF Sbjct: 176 VGIGGDPIPGSNFIDILKLFQ 196 >gi|148222521|ref|NP_001088255.1| ATP citrate lyase [Xenopus laevis] gi|54038148|gb|AAH84253.1| LOC495086 protein [Xenopus laevis] Length = 1091 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 86/318 (27%), Positives = 140/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 480 TTLFTRHTKSIVWGMQTRAVQGMLDFDYICSRSEPSVAALVYPFTGDHKQKFYWGHKEIL 539 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A + + + + A D+ IE++ +I I I EGIP ++ Sbjct: 540 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTIETMHYPQIRAIAIIAEGIPEALTRKL 599 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 IKMADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 659 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 660 LNNIISRTTDGVFEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 719 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +KD KPIV + G A GHAGA + A K A+KEAG+ + Sbjct: 720 GIKDGR---LTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 776 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 777 PRSFDELGDVIQSVYEDL 794 >gi|317419433|emb|CBN81470.1| ATP-citrate synthase [Dicentrarchus labrax] Length = 1092 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 81/318 (25%), Positives = 139/318 (43%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L K TK +V G+ + G + V ++P K YW + Sbjct: 481 TTLFRKQTKAMVWGMQTRAVQGMLDFDYVCSRDGPSVAAMVYPFTGDHKQKFYWGHKEIL 540 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PV+ +A+A ++ + + + A D+ +E+++ +I I I EGIP ++ Sbjct: 541 LPVYKNMADAMKKHPEVDVLISFASLRSAFDSTVEAMQYPQIHTIAIIAEGIPEAQTRKM 600 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 601 IKMADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 660 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + Q Sbjct: 661 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGIQMIVVLGEIGGTEEYKICQ 720 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +++ KP+V + G A GHAGA + A K A+++AG + Sbjct: 721 GIREGRI---TKPVVCWCIGTCATMFTSEVQFGHAGACANQASETAVAKNQALRDAGAYV 777 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 778 PKSFDELGDVIKTVYDEL 795 >gi|195121624|ref|XP_002005320.1| GI20417 [Drosophila mojavensis] gi|193910388|gb|EDW09255.1| GI20417 [Drosophila mojavensis] Length = 1097 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 TK +V G+ + + + VV ++P K YW + +P Sbjct: 489 FFSNTTKAIVWGMQQRAVQSMLDFDFICRRDEPSVVAMVYPFTGDHKQKYYWGHKEILIP 548 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +++A + + V + A D+ +E +E +I + I EGIP ++ Sbjct: 549 VYKKMSDAIHKHKEVDVMVNFASLRSAYDSTLEVLEFPQIRTVAIIAEGIPENMTRKLIV 608 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 609 EANKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELN 668 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G + IGGD G+ F+D + + +D T+ +V++GE+GG+ E + + Sbjct: 669 NIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQSDPETKLLVLLGEVGGTEEYDVCAAI 728 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KP+V + G A GHAG+ + + A K A++EAG + Sbjct: 729 KDGRI---TKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKALREAGAYVPD 785 Query: 285 SPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 786 SFDTLGELIHHVYGEL 801 >gi|282898787|ref|ZP_06306774.1| CoA-binding protein [Cylindrospermopsis raciborskii CS-505] gi|281196314|gb|EFA71224.1| CoA-binding protein [Cylindrospermopsis raciborskii CS-505] Length = 295 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 104/297 (35%), Positives = 159/297 (53%), Gaps = 14/297 (4%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 ++KVL+QG + T H +Q Y T +V G+ P G N+PVF V E Sbjct: 6 DSKVLIQGFSELISTTHIDQMKSYYGTNLVAGVDPGHGGIMAH----NLPVFDLVEEVVS 61 Query: 68 RTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + ++I V P DA +E+I A I I+ I+ G+P LDMV + + E ++G Sbjct: 62 SFGTIDTTIISVHPYQVLDAALEAIAANISQIIIISPGVPPLDMVTLLRKTENHEILIVG 121 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN PGI+ P +G P + G+VGI+SRS TLTYE ++ ++ GLGQS +V IG D Sbjct: 122 PNSPGIIVPGKILLGTQPSEFYTPGNVGIVSRSSTLTYEVAWELTKAGLGQSISVSIGSD 181 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + G+ F L++ DE TE+IV+VG+ GG +EE AA+++ KP+V ++AG+ Sbjct: 182 AIVGSSFSQWLQILDEDENTEAIVLVGQPGGESEEVAAKYI----STAIDKPVVAYIAGR 237 Query: 247 TAPPGRTMGHAGAVISGGK-----GGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 APP ++ +G + K G K++ A I +A P I + LV+ + Sbjct: 238 HAPPSKSWHQSGNFATVVKRDPDFGSVSTKLSTFSNAQIPVAQYPQEIPQLLVKAMK 294 >gi|298508702|pdb|3MWE|B Chain B, Truncated Human Atp-Citrate Lyase With Tartrate Bound Length = 335 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 4 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 63 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A + + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 64 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 123 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 124 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 183 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 184 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 243 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KPIV + G A GHAGA + A K A+KEAG+ + Sbjct: 244 GIKEGR---LTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 300 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 301 PRSFDELGEIIQSVYEDL 318 >gi|28935|emb|CAA45614.1| ATP-citrate (pro-S-)-lyase [Homo sapiens] Length = 1105 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 82/318 (25%), Positives = 142/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 494 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 553 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A + + + + A D+ +E++ A+I I I EGIP ++ Sbjct: 554 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKL 613 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++ + +V +SRSG ++ E Sbjct: 614 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYPQAAVAYVSRSGGMSNE 673 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + ++ Sbjct: 674 LNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKISR 733 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KPIV + G A GHAGA + A K A+KEAG+ + Sbjct: 734 GIKEGR---LTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 790 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 791 PRSFDELGEIIQSVYEDL 808 >gi|298490423|ref|YP_003720600.1| CoA-binding domain-containing protein ['Nostoc azollae' 0708] gi|298232341|gb|ADI63477.1| CoA-binding domain protein ['Nostoc azollae' 0708] Length = 295 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 97/298 (32%), Positives = 163/298 (54%), Gaps = 15/298 (5%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 ++++L+QG + H Q Y T ++ G+ P G ++PVF V EA Sbjct: 6 DSRILIQGFSEFISATHIAQMKAY-GTNLIAGVQPGCGGQM----KYDLPVFDLVEEAIS 60 Query: 68 RTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + A + ++I V P DA +E+ + I I+ I+ G+P L MV + + E ++G Sbjct: 61 KLGAIDTTIICVHPYQVLDAALEASASNIRQIIIISPGVPPLHMVTLLRKTETREILVVG 120 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN PGI+ P +G P + GSVGI+SRS TLTYE ++ +Q GLGQS +V IG D Sbjct: 121 PNSPGIIVPGKILLGTQPSEFYTPGSVGIVSRSSTLTYEVAWELTQAGLGQSISVSIGSD 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + G+ F+ L++ DE T++IV+VG+ GG +EE AA+++ + KP++ ++AG+ Sbjct: 181 AIVGSSFLQWLQILDEDETTDAIVLVGQPGGGSEEAAARYIAEAI----DKPVIAYIAGR 236 Query: 247 TAPPGRTMGHAGAVIS-----GGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 AP + G + + G ++K+ A + A + +A PA+I L +++G+ Sbjct: 237 HAPQSKYWHQTGNIATVVRRDPNFGTTQNKLAAFQAAQVPVAEYPAQIPEFLKKVMGN 294 >gi|148222492|ref|NP_001088452.1| hypothetical protein LOC495316 [Xenopus laevis] gi|54311201|gb|AAH84776.1| LOC495316 protein [Xenopus laevis] Length = 1101 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 140/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 TTLFTRHTKSIVWGMQTRAVQGMLDFDYICSRSEPSVAALVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A ++ + + + A D+ IE++ +I I I EGIP ++ Sbjct: 550 IPVFKNMADAMKKHPEVDVLINFASLRSAYDSTIETMNFPQIRAIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKMADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD + F+D + + + IV++GEIGG+ E + + Sbjct: 670 LNNIISRTTDGVFEGVAIGGDRYPASTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 729 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KPIV + G A GHAGA + A K AMKEAG+ + Sbjct: 730 GIKEGR---LTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQAMKEAGVFV 786 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 787 PRSFDELGDVIQSVYEDL 804 >gi|242014064|ref|XP_002427718.1| ATP-citrate synthase, putative [Pediculus humanus corporis] gi|212512153|gb|EEB14980.1| ATP-citrate synthase, putative [Pediculus humanus corporis] Length = 1093 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 86/316 (27%), Positives = 139/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 + TK ++ G+ + + + VV ++P K YW + + Sbjct: 485 MFTSKTKAIIWGMQTRAVQSMLDFDFVCRRSEPSVVAMVYPFTGDHKQKFYWGHKEILIT 544 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ + +A + A+ V + A ++ +E++ +I I I EGIP ++ A Sbjct: 545 VYKKMEDAMNKHKDADVLVNFASLRSAYESTMETLNYPQIRTIAIIAEGIPENFTRKLIA 604 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +IGP G + P KIG I+ +++ GSV +SRSG ++ E Sbjct: 605 EANLKGVNIIGPATVGGIKPGCFKIGNTGGMMDNILHSRLYQPGSVAYVSRSGGMSNELN 664 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD GT FID + + AD A + IV++GE+GG E E + L Sbjct: 665 NIISKTTDGVYEGVAIGGDRYPGTTFIDHVMRYEADPAIKMIVLLGEVGGVEEYEVCEAL 724 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K R KP+V + G AP GHAG+ + K A K + K+AG + Sbjct: 725 K---SRKITKPLVAWCIGTCAPMFSSEIQFGHAGSCANSDKETATAKNESFKKAGAEVPS 781 Query: 285 SPARIGRSLVELLGSL 300 S +G ++ + SL Sbjct: 782 SFDTLGDTIHSVYLSL 797 >gi|145615655|ref|XP_360366.2| hypothetical protein MGG_05740 [Magnaporthe oryzae 70-15] gi|145022445|gb|EDK06465.1| hypothetical protein MGG_05740 [Magnaporthe oryzae 70-15] Length = 1341 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 111/300 (37%), Positives = 175/300 (58%), Gaps = 6/300 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++L+ +T+VL QG TG+ T + +I + T VVGG+ P + T + +PV + Sbjct: 444 NLLIGAHTRVLYQGFTGRQATANAAASIAW-GTNVVGGVSPGRSGT---HETLGLPVLGS 499 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA +A+ I+V AI E+++AEI L+V + E +P+ DM+RV L +S Sbjct: 500 VREAAAALRPDATAIFVAADQTAAAIEEAVQAEIGLVVAVAEHVPMRDMLRVHDVLRTQS 559 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +RL+G N PGI+ P C++G P +F G VGI ++SGTL+YE T++ GLGQS Sbjct: 560 RTRLVGANSPGIVAPRGRCRVGFQPLGVFSPGKVGIAAKSGTLSYEVAASTTRAGLGQSL 619 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VG+GGD + GT+ + L + L D+ATE++ +VGE+GG E EAA+ +++ + G +KPI Sbjct: 620 CVGVGGDVLAGTDMCEALGVLLRDDATEAVALVGELGGVGELEAAELIREYRRSGGRKPI 679 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V +AG R +GHAGA A K A+++ G+ + P+ +G + L + Sbjct: 680 VALLAGLGVESERVIGHAGAFWEKRTELARTKQRALEDIGVSLVTHPSEMGEVIKRKLQN 739 >gi|289724570|gb|ADD18276.1| ATP-citrate lyase [Glossina morsitans morsitans] Length = 708 Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 136/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 TK +V G+ + + + VV ++P K YW + +P Sbjct: 100 FFTNKTKAIVWGMQQRAVQSMLDFDFICRRDEPSVVAMVYPFTGDHKQKFYWGHKEILIP 159 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +++A R + V + A ++ +E ++ +I + I EGIP ++ Sbjct: 160 VYKNMSDAVTRHKEVDVMVNFASLRSAYESTMEVLDFPQIRTVAIIAEGIPENMTRKMIL 219 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 220 AANKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELN 279 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G + IGGD GT F+D + + AD + IV++GE+GG+ E + L Sbjct: 280 NIVSKATDGVLEGIAIGGDRYPGTTFMDHIMRYQADPEAKLIVLLGEVGGTEEYDVCAAL 339 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KP+V + G A GHAG+ + + A K A+++AG + Sbjct: 340 KDGRI---TKPLVAWCIGTCAGMFTSEVQFGHAGSCANSDRETATAKNKALRDAGAYVPD 396 Query: 285 SPARIGRSLVELLGSL 300 S +G + + L Sbjct: 397 SFDTLGELIQHVYAEL 412 >gi|167933008|ref|ZP_02520095.1| succinyl-CoA synthetase, alpha subunit [candidate division TM7 single-cell isolate TM7b] Length = 284 Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats. Identities = 119/262 (45%), Positives = 168/262 (64%), Gaps = 10/262 (3%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V++QG+TGK G FH + Y +T +V G P + + G VPVF T+ + K+R A Sbjct: 11 VIIQGITGKNGRFHARNMLDY-KTSIVAGTSPNQAISEVHG----VPVFRTIDDIKKRFA 65 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + SVI+VP A AI+E+I+A+IPLI+CITEG+PV DM+ +K +L +S S LIGPNCP Sbjct: 66 IDISVIFVPAPHAKAAILEAIQAQIPLIICITEGVPVHDMLEIKQKLHRSRSVLIGPNCP 125 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G+L P +GI+P S+ G I+SRSGTLTYEA+ +Q G GQ +GIGGD + G Sbjct: 126 GVLLPGRQLLGIIPASLAVPGDTAIVSRSGTLTYEAMSLLTQAGFGQRYIIGIGGDMISG 185 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 + F+D L+LF D + + IVM+GEIGG +E AA ++K + KP+ ++AG +AP Sbjct: 186 SSFVDCLQLFQNDPSVKRIVMIGEIGGISEITAADYIK----QSINKPVYAYIAGHSAPA 241 Query: 251 GRTMGHAGAVI-SGGKGGAEDK 271 G MGH GA++ + A K Sbjct: 242 GIQMGHTGAILGTNALESAATK 263 >gi|66530142|ref|XP_623083.1| PREDICTED: ATP-citrate synthase isoform 1 [Apis mellifera] Length = 1086 Score = 228 bits (582), Expect = 7e-58, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L T+ ++ G+ + + + V ++P K YW V +P Sbjct: 478 LFSSKTRAIIWGMQTRAVQSMLDFDFVCRRSEPSVAAIVYPFTGDHKQKFYWGHKEVLIP 537 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ + +A + T A+ V + A D+ +E+++ +I I I EGIP ++ Sbjct: 538 VYKQMRDAMTKHTDADVMVTFASLRSAYDSAVETMQFPQIRTIAIIAEGIPENMTRKLIL 597 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 598 MAQQKGITIIGPATVGGVKPGCFKIGNTGGMMDNILHSKLYRPGSVAYVSRSGGMSNELN 657 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD GT F++ + + + + IV++GE+GG E E + L Sbjct: 658 NIISKATNGVLEGVAIGGDRYPGTTFMNHIMRYQENPEVKLIVLLGEVGGVEEYEVCEAL 717 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K + KP++ + G A GHAG++ A K A+KEAG + Sbjct: 718 K---TKKITKPLIAWCIGTCASMFNSEVQFGHAGSIAHTNLETASAKNIALKEAGAYVPD 774 Query: 285 SPARIGRSLVELLGSL 300 S +G + + +L Sbjct: 775 SFDNLGDLMQTVYSNL 790 >gi|156547848|ref|XP_001604320.1| PREDICTED: similar to ENSANGP00000012364 [Nasonia vitripennis] Length = 1087 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 134/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L TK ++ G+ + + + V ++P K YW V +P Sbjct: 479 LFSSKTKSIIWGMQTRAVQSMLDFDFVCRRTEPSVAALVYPFTGDHKQKFYWGHKEVLIP 538 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + + +A + A+ + + A D+ IE+++ +I I I EGIP ++ Sbjct: 539 SYKNMKDAMAKHPDADVMITFASLRSAYDSAIETLQFPQIKTIAIIAEGIPENMTRKLIL 598 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 599 KANEKKVTIIGPATVGGVKPGCFKIGNTGGMMDNILHSKLYRPGSVAYVSRSGGMSNELN 658 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD GT F+D + + D + I+++GE+GG E E + L Sbjct: 659 NIVSKASNGVFEGVAIGGDRYPGTTFMDHIMRYQNDPDAKLIILLGEVGGVEEYEVCEAL 718 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K + KP+V + G A GHAG++ A K A+K AG + Sbjct: 719 KSKRI---TKPLVAWCIGTCASMFNSEVQFGHAGSIAHSNLETAVAKNEALKAAGAYVPD 775 Query: 285 SPARIGRSLVELLGSL 300 S +G + + L Sbjct: 776 SFDNLGDLIHSVYEQL 791 >gi|307197888|gb|EFN78987.1| ATP-citrate synthase [Harpegnathos saltator] Length = 1087 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 80/316 (25%), Positives = 136/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L TK ++ G+ + + + V ++P K YW V +P Sbjct: 479 LFHDKTKSIIWGMQTRAVQSMLDFDFVCRRSEPSVAAIVYPFTGDHKQKFYWGHKEVLIP 538 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ + +A + A+ V + A ++ +E+++ +I I I EGIP ++ Sbjct: 539 VYKQMKDAMAKHKDADVMVTFASLRSAYESTMETMQFPQIRTIAIIAEGIPENMTRKLIL 598 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 599 TAQQKNVTIIGPATVGGVKPGCFKIGNTGGMMDNILHSKLYRPGSVAYVSRSGGMSNELN 658 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD GT F+D + + D + I+++GE+GG E E + L Sbjct: 659 NIISKASNGVLEGVAIGGDRYPGTTFMDHIMRYQNDSDAKLIILLGEVGGVEEYEVCEAL 718 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K + KP++ + G A GHAG++ A K A+K AG + Sbjct: 719 KTDKI---TKPLIAWCIGTCASMFSSEVQFGHAGSIAHTNLETASAKNAALKAAGAYVPE 775 Query: 285 SPARIGRSLVELLGSL 300 S +G + + L Sbjct: 776 SFDNLGDLMQTVYEQL 791 >gi|291237585|ref|XP_002738714.1| PREDICTED: acly protein-like [Saccoglossus kowalevskii] Length = 1092 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 85/316 (26%), Positives = 136/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L K+TK +V G+ + G + + VV ++P K YW + +P Sbjct: 485 LFSKHTKAMVWGMQPRAVQGMLDFDYVCQRSKPSVVCMVYPFSGDHKQKFYWGHKEILIP 544 Query: 58 VFTTVAE-AKERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 ++ ++A K + + + A ++ +E+++ +I I I EGIP + Sbjct: 545 LYKSMANAIKNHPGVDTMINFASLRSAYESTVEAMQFPQIRSITNIAEGIPENKTRLLNK 604 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 605 IAKEKNVSIIGPATVGGIKPGCFKIGNTGGMLDNILSSKLYRPGSVAYVSRSGGMSNELN 664 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD GT FID + + D + IV++GE+GG E E + Sbjct: 665 NIISRNTNGVYEGVAIGGDRYPGTVFIDHVLRYQDDHNIKMIVLLGEVGGVEEYEICSQI 724 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 ++ KPIV + G A GHAGA A K A+ AG + Sbjct: 725 ENGRI---TKPIVAWCIGTCATMFTSEVQFGHAGACAQAEAETARAKNKALAVAGAYVPN 781 Query: 285 SPARIGRSLVELLGSL 300 S IG + E+ L Sbjct: 782 SFDDIGDKIKEVYEQL 797 >gi|328849140|gb|EGF98326.1| hypothetical protein MELLADRAFT_46071 [Melampsora larici-populina 98AG31] Length = 1145 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 85/315 (26%), Positives = 140/315 (44%), Gaps = 22/315 (6%) Query: 5 VDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPV 58 D+NT+ LV GL + G + A + V I+P G YW +PV Sbjct: 529 FDENTRGLVYGLQPRAIQGMLDFDFACGRTKPSVAAMIYPFGGHHVQKFYWGTKETLLPV 588 Query: 59 FTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKAR 116 + T+AEA ++ A+ V + + +E++E ++ I I EG+P + Sbjct: 589 YATIAEAVKKHPDADTLVNFSSSRSVYQSTLEALELPQLKSIALIAEGVPERHARAILHL 648 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 +K +IGP G + P +IG I+ ++R GSV +S+SG ++ E Sbjct: 649 AQKKKVIIIGPATVGGIKPGCFRIGNTGGMMDNIIASKLYRPGSVAYVSKSGGMSNELNN 708 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 S G + IGGD GT FID + + AD + +V++GE+GG E + +K Sbjct: 709 ILSLTTNGTYEGIAIGGDRYPGTTFIDHMLRYEADPNCKMLVLLGEVGGVEEYRVIEAVK 768 Query: 229 DEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 KKPI+ + G A GHAG++ + A+ K AM+ AG + + Sbjct: 769 A---GTIKKPIIAWAIGTCAKMFTTEVQFGHAGSMANSDLETADAKNRAMRAAGFVVPDT 825 Query: 286 PARIGRSLVELLGSL 300 + +L ++ L Sbjct: 826 FEDLPAALAKVYAGL 840 >gi|332797166|ref|YP_004458666.1| succinyl-CoA synthetase subunit alpha [Acidianus hospitalis W1] gi|332694901|gb|AEE94368.1| succinyl-CoA synthetase alpha subunit [Acidianus hospitalis W1] Length = 258 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 130/265 (49%), Positives = 169/265 (63%), Gaps = 9/265 (3%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 +L T++V G+ P KG + G VPV+ TV EA + +AS+I+VP A DAI Sbjct: 1 MLEYGTKIVAGVTPGKGGSQVYG----VPVYDTVKEAMQEHEIDASIIFVPAKFAVDAIY 56 Query: 89 ESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF 148 E+I+ IPLIV ITE IPVLDM +V EK R+IGPNCPGI+ P +GIMP F Sbjct: 57 EAIDGGIPLIVVITEHIPVLDMAKVVHYAEKKGVRIIGPNCPGIIVPGESLLGIMPSRAF 116 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 RKG +GI+SRSGTLTYE GQST +GIGGDP+ GT+ D++++F D+ TE Sbjct: 117 RKGKIGIVSRSGTLTYEVAEILKD--FGQSTVIGIGGDPIIGTKMQDIVKMFDEDKDTEE 174 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 IV++GEIGG+ EEE A+ K+ K IV ++AG TAP + MGHAGAV+ G G Sbjct: 175 IVIIGEIGGTMEEEVAKMKKEGKIS---KNIVAYIAGLTAPKEKRMGHAGAVVYMGLGTY 231 Query: 269 EDKINAMKEAGICIAPSPARIGRSL 293 E K+NA KEAGI +A +P I + Sbjct: 232 ESKVNAFKEAGIKVAKTPFEIKDLI 256 >gi|237651905|gb|ACR08641.1| succinyl coenzyme A synthetase alpha subunit [Drosophila silvestris] Length = 230 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 119/205 (58%), Positives = 157/205 (76%), Gaps = 6/205 (2%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLTGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VA+AK+ T +A+VIYVPP GA AI+E+++AEIPLIVCITEG+P DMV+VK L + Sbjct: 86 VADAKKATDPHATVIYVPPPGAAAAIMEALDAEIPLIVCITEGVPQHDMVKVKHALISQD 145 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSGTLTYEAV QT++ GLGQ+ Sbjct: 146 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSGTLTYEAVHQTTEVGLGQTLC 205 Query: 181 VGIGGDPVKGTEFIDVLELFLADEA 205 VGIGGDP GT+FID LE+FL D Sbjct: 206 VGIGGDPFNGTDFIDCLEVFLKDPE 230 >gi|196002753|ref|XP_002111244.1| hypothetical protein TRIADDRAFT_22398 [Trichoplax adhaerens] gi|190587195|gb|EDV27248.1| hypothetical protein TRIADDRAFT_22398 [Trichoplax adhaerens] Length = 1088 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 82/315 (26%), Positives = 134/315 (42%), Gaps = 22/315 (6%) Query: 5 VDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVPV 58 T+ V G+ + G + V I+P K YW + +PV Sbjct: 479 FTDKTRCFVWGMQPRAVQGMLDFDYVSSRETWSVAAMIYPFSGDHKQKFYWGHKEILIPV 538 Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKAR 116 F +++A + + V + A D+ +E+++ +I I I EGIP ++ A Sbjct: 539 FKDMSDAMRKFPEVDVLVNFASLRSAYDSTMEALQFKQIKAISIIAEGIPEAKTKQLIAT 598 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + P +IG I+ ++R GSV +SRSG ++ E Sbjct: 599 AQEKDVTVIGPATVGGIKPGCFRIGNTGGMLDNIIASKLYRPGSVAYVSRSGGMSNELNN 658 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + G V IGGD GT FID + + + + IVM+GE+GG E Q +K Sbjct: 659 MICRTTDGVYEGVAIGGDRYPGTTFIDHILRYNDTDDVKLIVMLGEVGGIEEYHICQEIK 718 Query: 229 DEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + KP+V + G A GHAGA + + + K A++EAG + S Sbjct: 719 NGRI---TKPVVAWCIGTCASMFTSEVQFGHAGACANADRETSVAKNKALREAGAHVPNS 775 Query: 286 PARIGRSLVELLGSL 300 G + ++ L Sbjct: 776 FDDYGILIRDVYNDL 790 >gi|302658494|ref|XP_003020950.1| succinyl-CoA synthetase beta subunit, putative [Trichophyton verrucosum HKI 0517] gi|291184822|gb|EFE40332.1| succinyl-CoA synthetase beta subunit, putative [Trichophyton verrucosum HKI 0517] Length = 698 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 126/328 (38%), Positives = 190/328 (57%), Gaps = 39/328 (11%) Query: 5 VDKNTKVLVQGLT--------GKAGTFHTEQAI-------------------LYCQTQVV 37 + +T+VL QG T GK + A L T++V Sbjct: 52 IGSHTRVLFQGFTVINMYILTGKQANRYLNSASRTSELGTNEVQATANVKESLAWGTKIV 111 Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPL 97 GG+ P G ++ +P+F +V A+E+ +AS +YVP + AI E++EAEIPL Sbjct: 112 GGVKPG-----VEGEHLGLPIFPSVRVAQEKAKPDASAVYVPGNQTAKAIEEALEAEIPL 166 Query: 98 IVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGI 155 IV + E +P+ DM+++ + L+ +S SRL+GPNCPGI++ C+IG P F G+VGI Sbjct: 167 IVAVAEHVPIHDMLKIHSMLKTQSKSRLVGPNCPGIISAVGKCRIGFQPLPCFAPGNVGI 226 Query: 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEI 215 +++SGTL YE V T++ GLGQS +G+GGD + GT+F+D L++F D+ T I++VGEI Sbjct: 227 VAKSGTLGYETVASTTRAGLGQSLCIGMGGDVLAGTDFVDALKVFEHDDDTHGIIIVGEI 286 Query: 216 GGSAEEEAAQFLKDEAKR---GRKKPIVGFVAGKTAPPGRTMGH--AGAVISGGKGGAED 270 GG AE EAA+++K +R + +PI+ + G APPGR MGH AGA + G+ A Sbjct: 287 GGEAEMEAAEWIKGYRRRISEAKFRPIMALIGGIEAPPGRVMGHADAGAWTAEGEPDART 346 Query: 271 KINAMKEAGICIAPSPARIGRSLVELLG 298 KI A++ AG+ + P + G + LL Sbjct: 347 KIQALQSAGVVMVDHPEKFGEGMKVLLA 374 >gi|195383876|ref|XP_002050651.1| GJ20089 [Drosophila virilis] gi|194145448|gb|EDW61844.1| GJ20089 [Drosophila virilis] Length = 1098 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 TK +V G+ + + + VV ++P K YW + +P Sbjct: 490 FFSNTTKAIVWGMQQRAVQSMLDFDFICRRDEPSVVAMVYPFTGDHKQKYYWGHKEILIP 549 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +++A + + V + A D+ +E +E +I + I EGIP ++ Sbjct: 550 VYKKMSDAIHKHKEVDVMVNFASLRSAYDSTLEVLEFPQIRTVAIIAEGIPENMTRKLII 609 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 EANKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELN 669 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G + IGGD G+ F+D + + +D T+ IV++GE+GG+ E + + Sbjct: 670 NIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQSDPETKLIVLLGEVGGTEEYDVCAAV 729 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KP+V + G A GHAG+ + + A K A+++AG + Sbjct: 730 KDGRI---TKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKALRDAGAYVPD 786 Query: 285 SPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 787 SFDTLGELIHHVYGEL 802 >gi|299739746|ref|XP_001839751.2| ATP citrate lyase isoform 2 [Coprinopsis cinerea okayama7#130] gi|298403919|gb|EAU82052.2| ATP citrate lyase isoform 2 [Coprinopsis cinerea okayama7#130] Length = 1160 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 85/315 (26%), Positives = 137/315 (43%), Gaps = 22/315 (6%) Query: 5 VDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPV 58 D NT+ V GL + G + + V I+P G YW +PV Sbjct: 545 FDANTRSFVYGLQPRAIQGMLDFDYSCGRQAPSVAAMIYPFGGHHIQKFYWGTKETLLPV 604 Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKAR 116 +T++ EA + + V + + +ES+E +I I I EG+P + + Sbjct: 605 YTSLKEAVAKHPDVDVLVNFASSRSVYPSTLESLEFPQIKAIALIAEGVPERHAREILWK 664 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + P +IG I+ ++R GSVG +S+SG ++ E Sbjct: 665 AKEKGVLIIGPATVGGIKPGCFRIGNSGGMMDNIIASKLYRPGSVGYVSKSGGMSNELNN 724 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 S G + IGGD G+ FID L + AD + +V++GE+GG E + +K Sbjct: 725 ILSLVTDGTYEGIAIGGDRYPGSTFIDHLLRYEADPNCKMLVLLGEVGGIEEYRVIEAVK 784 Query: 229 DEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 KKPIV + G A GHAG++ + A+ K AM++AG + + Sbjct: 785 ---SGKIKKPIVAWAIGTCAKMFTTEVQFGHAGSMANSDMETADAKNKAMRDAGFVVPET 841 Query: 286 PARIGRSLVELLGSL 300 + L E +L Sbjct: 842 FEELPHVLKETYENL 856 >gi|307181417|gb|EFN69012.1| ATP-citrate synthase [Camponotus floridanus] Length = 819 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 82/316 (25%), Positives = 135/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L TK ++ G+ + + + V ++P K YW V +P Sbjct: 478 LFSNKTKSIIWGMQTRAVQSMLDFDFVCRRFEPSVAAIVYPFTGDHKQKFYWGHKEVLIP 537 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ + +A + A+ V + A ++ +E+++ +I I I EGIP ++ Sbjct: 538 VYKQMKDAMAKHVDADVMVTFASLRSAYESTMETLQFPQIRAIAIIAEGIPENMTRKLIL 597 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 598 AAQRRNVTIIGPATVGGVKPGCFKIGNTGGMMDNILHSKLYRPGSVAYVSRSGGMSNELN 657 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD GT F+D + + + E IV++GE+GG E E + L Sbjct: 658 NIISKASNGVLEGVAIGGDRYPGTTFMDHIMRYQNNPEAELIVLLGEVGGIEEYEVCEAL 717 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K KP+V + G A GHAG++ A K A+K AG + Sbjct: 718 K---SGKITKPLVAWCIGTCASMFNSEVQFGHAGSIAHSNLETASAKNAALKAAGAYVPD 774 Query: 285 SPARIGRSLVELLGSL 300 S +G + + L Sbjct: 775 SFDTLGDLIQSVYEKL 790 >gi|325264213|ref|ZP_08130945.1| succinyl-CoA synthetase, alpha subunit [Clostridium sp. D5] gi|324030697|gb|EGB91980.1| succinyl-CoA synthetase, alpha subunit [Clostridium sp. D5] Length = 294 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 115/285 (40%), Positives = 178/285 (62%), Gaps = 9/285 (3%) Query: 12 LVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK-ERTA 70 ++ G+TGK G H + L +++ G+ P KG G VPVF TVA+AK + Sbjct: 1 MIIGITGKQGRTHCMRT-LESGAKLLAGVAPGKGGQKVEG----VPVFETVADAKIKFPG 55 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 ++++ VPP DA + ++ I L+V ITE +PVLD++ + + ++++GPN Sbjct: 56 IESAMLLVPPKFVKDAAMRALHEGIKLLVIITEFVPVLDVLEIVNEAKILGAKVVGPNTI 115 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 GI++P K+GIMP I+ KG +GI+SRSGTLT+E + +G G ST VGIGGD + G Sbjct: 116 GIISPGKSKLGIMPDYIYGKGHIGIISRSGTLTHETASNLTFKGFGLSTCVGIGGDSIIG 175 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 D+LELF D+ T++IV++GEIGG++EE AA +K+ G KKP+ ++AG AP Sbjct: 176 MNHADILELFAKDDETDAIVIIGEIGGTSEEMAAAKIKEL---GMKKPVYAYIAGMYAPE 232 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 + MGHAGA++SGG G + K+ A+++AG+ + P+ +I + E Sbjct: 233 NKRMGHAGAIVSGGMGTVKSKVAALEDAGVTVCPTLGKIVECIDE 277 >gi|71051157|gb|AAH99037.1| LOC495086 protein [Xenopus laevis] Length = 697 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 86/318 (27%), Positives = 140/318 (44%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 86 TTLFTRHTKSIVWGMQTRAVQGMLDFDYICSRSEPSVAALVYPFTGDHKQKFYWGHKEIL 145 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A + + + + A D+ IE++ +I I I EGIP ++ Sbjct: 146 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTIETMHYPQIRAIAIIAEGIPEALTRKL 205 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 206 IKMADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 265 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F+D + + + IV++GEIGG+ E + + Sbjct: 266 LNNIISRTTDGVFEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICR 325 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +KD KPIV + G A GHAGA + A K A+KEAG+ + Sbjct: 326 GIKDGR---LTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 382 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 383 PRSFDELGDVIQSVYEDL 400 >gi|254559360|ref|YP_003066455.1| succinyl-CoA synthetase subunit alpha [Methylobacterium extorquens DM4] gi|254266638|emb|CAX22411.1| succinyl-CoA synthetase, alpha subunit [Methylobacterium extorquens DM4] Length = 301 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 123/294 (41%), Positives = 180/294 (61%), Gaps = 13/294 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I+ ++ +VLVQG+TGK GTF TE+ + C TQVV G++PK+ G VPV+ T Sbjct: 2 IIYRQSARVLVQGITGKQGTFWTEKMME-CGTQVVAGVNPKRAGERHLG----VPVYATA 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 A + +A+V+++PP+ A +A ++I A +V +TE IP LD++ + + + Sbjct: 57 KAAMTESPFDAAVMFIPPAMAREAAFDAIHAGAKTVVILTEHIPALDVIAIHHAAAQHGT 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSI---FRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPN GI+TP +GIMPG F+ G +G++SRSG+L ++ GLGQS Sbjct: 117 RIIGPNTAGIVTPGEGFVGIMPGHNPNIFQPGEIGVISRSGSLGTLICLNLTRAGLGQSA 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT D L+ D T ++V+VGEIGG+ EE AA E G KP+ Sbjct: 177 FLGIGGDPMIGTTTRDALQALDQDPRTRAVVLVGEIGGAMEEAAA-----EYAAGMSKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 V F+AG+ +PPG+ MGHAGA++SG G E K A++ AG+ +A +PA I L Sbjct: 232 VSFIAGRASPPGKKMGHAGAIVSGSMGSYEGKRRALEAAGVAVADTPAEIPSLL 285 >gi|156374103|ref|XP_001629648.1| predicted protein [Nematostella vectensis] gi|156216653|gb|EDO37585.1| predicted protein [Nematostella vectensis] Length = 1089 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + T+ +V G+ + G + V ++P K Y+ + +P Sbjct: 473 LFHEKTRAIVWGMQARAVQGMLDFDYVCERKYPSVAAMVYPFSGNHKQKFYFGHNEIMIP 532 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ + EA + + + + A DA +E+++ +I I I EGIP + Sbjct: 533 VYKDMGEAMNKHPETDVFINFASLRSAYDATLEAMQFPQIRTIAIIAEGIPEAKTRILNK 592 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 593 KAKELGITIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 652 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G + IGGD GT FID + + ++ + IV++GE+GG E E + Sbjct: 653 NIIARTTDGVYEGIAIGGDRYPGTTFIDHVLRYQDNQDIKMIVLLGEVGGRDEYEICDAI 712 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K KP+V + G A GHAGA A K A+K +G + Sbjct: 713 KSGR---VNKPLVAWCIGTCANMFTSEVQFGHAGASAHSNIETAVAKNKALKSSGAHVPD 769 Query: 285 SPARIGRSLVELLGSL 300 S + + ++ L Sbjct: 770 SFDSLSEVIKDVYDGL 785 >gi|260199973|ref|ZP_05767464.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis T46] Length = 241 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 118/240 (49%), Positives = 159/240 (66%), Gaps = 10/240 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 120 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K + Sbjct: 179 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 237 >gi|322699848|gb|EFY91607.1| succinate-CoA ligase (alpha subunit) [Metarhizium acridum CQMa 102] Length = 290 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 130/283 (45%), Positives = 183/283 (64%), Gaps = 7/283 (2%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 K T + + I Y T+VVGG+ P KG +++PVF TV EA E+ + S ++V Sbjct: 13 KEATSNAKDTIGY-GTKVVGGVSPGKGGRTH----LDLPVFGTVKEAVEQVKPHVSAVFV 67 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTPDS 137 P A AIIE+IEAE+P++V + E IPV D++RV+ L +S SRL+GPNCPGI+ PD Sbjct: 68 PAQFAAKAIIEAIEAEVPVVVSVAEHIPVHDLLRVQEVLRTQSRSRLVGPNCPGIIAPDQ 127 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 C++GIMP + +G VGI+S+SGTL+YEAV TS GLGQS + +GGDP+ GT +D L Sbjct: 128 CRVGIMPFRQYTRGCVGIVSKSGTLSYEAVGATSAAGLGQSFVIAVGGDPMPGTTIVDSL 187 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG-RKKPIVGFVAGKTAPPGRTMGH 256 +F E TE I+++GEIGG E AA+ ++ + KPIV VAG+TAP G+ MGH Sbjct: 188 RVFFDHEETEGIIVIGEIGGEQELRAAEMIRAYRRSTPNPKPIVAMVAGQTAPRGKVMGH 247 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 AGAV++ A +K A+++AG + P P +G ++ LLG Sbjct: 248 AGAVLTARDVTAAEKARALEDAGAVVVPHPGVMGSTMKALLGR 290 >gi|289442368|ref|ZP_06432112.1| succinyl-CoA ligase [Mycobacterium tuberculosis T46] gi|289415287|gb|EFD12527.1| succinyl-CoA ligase [Mycobacterium tuberculosis T46] Length = 244 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 118/240 (49%), Positives = 159/240 (66%), Gaps = 10/240 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG AEE AA F+K + Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240 >gi|119175812|ref|XP_001240069.1| ATP-citrate synthase subunit 1 [Coccidioides immitis RS] gi|303318315|ref|XP_003069157.1| ATP-citrate synthase subunit 1, putative [Coccidioides posadasii C735 delta SOWgp] gi|240108843|gb|EER27012.1| ATP-citrate synthase subunit 1, putative [Coccidioides posadasii C735 delta SOWgp] gi|320039167|gb|EFW21102.1| ATP-citrate synthase [Coccidioides posadasii str. Silveira] Length = 657 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 84/316 (26%), Positives = 135/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V G I+ G YW +P Sbjct: 38 LFHNKTRCFVYGMQPRAVQGMLDFDFICKRTTPSVAGIIYTFGGQFVSKMYWGTSETLLP 97 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +V +A + T + V + + +E ++ +I I I EG+P + Sbjct: 98 VYQSVGKAMAKHTDVDVVVNFASSRSVYSSTMELMQYPQIKTIAIIAEGVPERRAREIMV 157 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 158 TAKEKGVTIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 217 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD GT F+D L F AD + ++++GE+GG E + + Sbjct: 218 NIVSQTTDGVYEGIAIGGDRYPGTTFLDHLLRFQADPQCKILLLLGEVGGVEEYRVIEAV 277 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KP+V + G A + GHAGA + A K AM+EAGI + Sbjct: 278 KN---GTITKPVVAWAIGTCASMFKTEVQFGHAGASANSQLETAVMKNQAMREAGIHVPD 334 Query: 285 SPARIGRSLVELLGSL 300 + + L + L Sbjct: 335 TFEELPEVLRAVYQKL 350 >gi|194756204|ref|XP_001960369.1| GF13329 [Drosophila ananassae] gi|190621667|gb|EDV37191.1| GF13329 [Drosophila ananassae] Length = 1097 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 82/316 (25%), Positives = 140/316 (44%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 +TK +V G+ + + + VV ++P K YW + +P Sbjct: 489 FFSTSTKAIVWGMQQRAVQSMLDFDFICRRSEPSVVAMVYPFTGDHKQKYYWGHKEILIP 548 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +++A + + V + A ++ +E +E +I + I EGIP ++ Sbjct: 549 VYKKMSDAIHKHKEVDVMVNFASMRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLII 608 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 609 EADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELN 668 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + L Sbjct: 669 NIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAAL 728 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KP+V + G A GHAG+ + + A K A+++AG + Sbjct: 729 KDGRI---TKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKALRDAGAYVPD 785 Query: 285 SPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 786 SFDTLGELIHHVYGEL 801 >gi|296416283|ref|XP_002837810.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633693|emb|CAZ82001.1| unnamed protein product [Tuber melanosporum] Length = 663 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 84/316 (26%), Positives = 134/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V GL + G + V I+P G YW +P Sbjct: 42 LFHTKTRAFVYGLQPRACQGMLDFDFICKRKTPSVAAIIYPFGGQFVSKMYWGTSETLLP 101 Query: 58 VFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +V +A E+ + V + + +E +E +I I I EG+P + Sbjct: 102 VYQSVEKACEKHPEVDTVVNFASSRSVYSSTLELMEKPQIKSIAIIAEGVPERRAREIMH 161 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ + ++GP G + P KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 162 IAQQKNITIVGPATVGGIKPGCYKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 221 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G V IGGD GT FID L + D + +V++GE+GG E + + Sbjct: 222 NILAEVTDGVYEGVAIGGDRYPGTTFIDHLLRYELDPECKILVLLGEVGGVEEYRVIEAV 281 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KPIV + G A + GHAG+ + A K AMKEAG + Sbjct: 282 KN---GTITKPIVAWAIGTCASMFKTEVQFGHAGSFANSQLETAASKNAAMKEAGFHVPE 338 Query: 285 SPARIGRSLVELLGSL 300 + ++L + L Sbjct: 339 TFEEFPQTLATVYQGL 354 >gi|195425586|ref|XP_002061078.1| GK10643 [Drosophila willistoni] gi|194157163|gb|EDW72064.1| GK10643 [Drosophila willistoni] Length = 1095 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 83/316 (26%), Positives = 139/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 TK +V G+ + + + VV ++P K YW + +P Sbjct: 487 FFSNTTKAIVWGMQQRAVQSMLDFDFICRRDEPSVVAMVYPFTGDHKQKYYWGHKEILIP 546 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +++A + + V + A ++ +E +E EI + I EGIP ++ Sbjct: 547 VYKKMSDAIHKHKEVDVMVNFASMRSAYESTLEVLEFPEIRTVAIIAEGIPENMTRKLII 606 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 607 EADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELN 666 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + L Sbjct: 667 NIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAAL 726 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KP+V + G A GHAG+ + + A K +++EAG + Sbjct: 727 KDGRI---TKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKSLREAGAYVPD 783 Query: 285 SPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 784 SFDTLGELIHSVYGEL 799 >gi|50540366|ref|NP_001002649.1| ATP-citrate synthase [Danio rerio] gi|49904342|gb|AAH76484.1| ATP citrate lyase [Danio rerio] Length = 1092 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 83/318 (26%), Positives = 139/318 (43%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L TK +V G+ + G + + V ++P K YW + Sbjct: 481 TTLFSNLTKSIVWGMQTRAVQGMLDFDYVCSRQEPSVAAMVYPFTGDHKQKFYWGHKEIL 540 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PV+ +A+A ++ + + + A D+ IE+++ +I I I EGIP ++ Sbjct: 541 LPVYKNMADAMKKHPEVDVLISFASLRSAYDSTIETMQFPQIHTIAIIAEGIPEALTRKI 600 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 601 IKMADEKGITIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 660 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ FID + + + IV++GEIGG+ E + Sbjct: 661 LNNIISRTTDGVYEGVAIGGDRYPGSVFIDHVLRYQDTPGVKMIVVLGEIGGNEEYKICN 720 Query: 226 FLKDEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP+V + G A GHAGA + A K A++EAG + Sbjct: 721 AIKEGRI---TKPVVCWCIGTCATLFSSEVQFGHAGACANQASETAVAKNKALEEAGAFV 777 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + +L Sbjct: 778 PKSFDELGDVIKSVYDNL 795 >gi|326432316|gb|EGD77886.1| acly protein [Salpingoeca sp. ATCC 50818] Length = 1083 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ L G+ + G + + V G I+P G YW V +P Sbjct: 473 LFTNKTRALFFGMQPRACQGMLDFDYCCKREKGSVAGMIYPFSGNHSQKFYWGTKEVLIP 532 Query: 58 VFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ + EA + + + + A D+ + +++ +I +I I EGIP + Sbjct: 533 VYQKMEEAMAKNPDVDVLINFASLRSAYDSTLAALQFPQIKVIAIIAEGIPEHLTRLLIK 592 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 593 EANARGVTIIGPATVGGIKPGCFKIGNTGGMIDNIISAKLYRPGSVAYVSRSGGMSNELN 652 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ F+D L + D + +V++GE+GG E + L Sbjct: 653 NIISRNSNGVYEGVAIGGDRYPGSTFMDHLLRYQDDPDAKVLVLLGEVGGIEEYAICEAL 712 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K KP++ + G A GHAGA + A K A++EAG + Sbjct: 713 KSSRI---NKPLIAWCIGTCAKMFSSDVQFGHAGASAHSDRETALAKNKALREAGALVPE 769 Query: 285 SPARIGRSLVELLGSL 300 S +G + + L Sbjct: 770 SFDTLGELIHKTYSEL 785 >gi|239614826|gb|EEQ91813.1| ATP-citrate synthase subunit 1 [Ajellomyces dermatitidis ER-3] gi|327352262|gb|EGE81119.1| ATP-citrate synthase subunit 1 [Ajellomyces dermatitidis ATCC 18188] Length = 659 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 85/316 (26%), Positives = 134/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V G I+ G YW +P Sbjct: 38 LFHNKTRCFVYGMQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 97 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E ++ +I I I EG+P + Sbjct: 98 VYQAVEKAMTKHPDVDTVVNFASSRSVYSSTMELMQYPQIKSIAIIAEGVPERRAREIMV 157 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 158 AAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 217 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + AD + +V++GE+GG E + + Sbjct: 218 NIISQNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPECKILVLLGEVGGVEEYRVIEAV 277 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 +D KP+V + G A + GHAGA + A K M+EAGI + Sbjct: 278 RD---GTITKPVVAWAIGTCASLFKTEVQFGHAGASANSELETAVMKNKCMREAGIHVPD 334 Query: 285 SPARIGRSLVELLGSL 300 + + + L E+ L Sbjct: 335 TFEDLPQVLAEVYKKL 350 >gi|209524799|ref|ZP_03273345.1| CoA-binding domain protein [Arthrospira maxima CS-328] gi|209494678|gb|EDZ94987.1| CoA-binding domain protein [Arthrospira maxima CS-328] Length = 301 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 101/302 (33%), Positives = 162/302 (53%), Gaps = 15/302 (4%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + ++KV++QGL + + T +V + +G +P F V + Sbjct: 3 LTPDSKVIIQGLRDSEPSLKAALNMKAYSTNIVACVSAGRGGDIIH----EIPFFDLVEQ 58 Query: 65 AKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 A+ + SVI V P DA +E+I+A I +V +TEG+P LDMVR+ + E + + Sbjct: 59 AQAAVGPVDTSVILVHPYDVLDAALEAIDAGIRQLVIVTEGMPPLDMVRLVRKAEATETL 118 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPNCPGI+ P +G P + GS+G++SRS TLTYE + LGQS +V I Sbjct: 119 VVGPNCPGIIVPGKLLLGTHPPQFYTPGSIGLISRSSTLTYEVAQALTDAKLGQSISVCI 178 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G D + G+ FI L++ D+ T++IV+VGE+GGS+EEEAA ++ + KP+V ++ Sbjct: 179 GSDLIVGSSFIQWLQILDEDDHTDAIVLVGEVGGSSEEEAASYIAE----TIDKPVVAYI 234 Query: 244 AGKTAPPGRTMGHAGAVISG------GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G P + + HA +I+ G A+ KI+ ++A I +A SP + L + L Sbjct: 235 TGLHTPKAQLISHASTIITSRFTQDLHPGTAQSKISVFEKAKIPVASSPYHLPELLKKCL 294 Query: 298 GS 299 Sbjct: 295 KK 296 >gi|15921203|ref|NP_376872.1| succinyl-CoA synthetase subunit alpha [Sulfolobus tokodaii str. 7] gi|15621988|dbj|BAB65981.1| 259aa long hypothetical succinyl-CoA synthetase alpha subunit [Sulfolobus tokodaii str. 7] Length = 259 Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats. Identities = 124/265 (46%), Positives = 175/265 (66%), Gaps = 8/265 (3%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 +L T++V G+ P KG T G VPV+ T+ +A + +AS+++VP A DAI Sbjct: 1 MLTYGTKIVAGVSPGKGGTTVHG----VPVYDTIEDALKEHEIDASIVFVPAKYAPDAIY 56 Query: 89 ESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF 148 E+I+ I L+V ITE IPVLDM+++ + +R+IGPNCPG++ P+ IGI+P F Sbjct: 57 EAIDGGIKLVVVITEHIPVLDMLKIVKYAKTKGTRIIGPNCPGLIVPEESLIGILPPRPF 116 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 +KG VGI+SRSGTLTYE + ++ GQST +GIGGDP+ GT+ I+++++F D TES Sbjct: 117 KKGKVGIVSRSGTLTYEV-AEMVKKDYGQSTVIGIGGDPIIGTDMIEIVKMFEEDPETES 175 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 IVM+GEIGG+ EE A+ +A+ KK IV ++AG TAP + MGHAGAV+ G G Sbjct: 176 IVMIGEIGGTMEERVAKM---KAEGKIKKKIVAYIAGMTAPREKRMGHAGAVVYMGMGTF 232 Query: 269 EDKINAMKEAGICIAPSPARIGRSL 293 E KI A+ EAGI +A +P I + L Sbjct: 233 ESKIKALTEAGIPVAKTPYEIPKLL 257 >gi|261190614|ref|XP_002621716.1| ATP-citrate synthase subunit 1 [Ajellomyces dermatitidis SLH14081] gi|239591139|gb|EEQ73720.1| ATP-citrate synthase subunit 1 [Ajellomyces dermatitidis SLH14081] Length = 659 Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats. Identities = 85/316 (26%), Positives = 134/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V G I+ G YW +P Sbjct: 38 LFHNKTRCFVYGMQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 97 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E ++ +I I I EG+P + Sbjct: 98 VYQAVEKAMAKHPDVDTVVNFASSRSVYSSTMELMQYPQIKSIAIIAEGVPERRAREIMV 157 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 158 AAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 217 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + AD + +V++GE+GG E + + Sbjct: 218 NIISQNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPECKILVLLGEVGGVEEYRVIEAV 277 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 +D KP+V + G A + GHAGA + A K M+EAGI + Sbjct: 278 RD---GTITKPVVAWAIGTCASLFKTEVQFGHAGASANSELETAVMKNKCMREAGIHVPD 334 Query: 285 SPARIGRSLVELLGSL 300 + + + L E+ L Sbjct: 335 TFEDLPQVLAEVYKKL 350 >gi|50554757|ref|XP_504787.1| YALI0E34793p [Yarrowia lipolytica] gi|49650656|emb|CAG80394.1| YALI0E34793p [Yarrowia lipolytica] Length = 650 Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats. Identities = 84/316 (26%), Positives = 133/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L +T+ V GL + G + V G I+P G YW +P Sbjct: 23 LFHNHTRSFVYGLQPRACQGMLDFDFICKRENPSVAGVIYPFGGQFVTKMYWGTKETLLP 82 Query: 58 VFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E +E + I I EG+P + Sbjct: 83 VYQQVEKAAAKHPEVDVVVNFASSRSVYSSTMELLEYPQFRTIAIIAEGVPERRAREILH 142 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + +K +IGP G + P K+G I+ ++R GSV +S+SG ++ E Sbjct: 143 KAQKKGVTIIGPATVGGIKPGCFKVGNTGGMMDNIVASKLYRPGSVAYVSKSGGMSNELN 202 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S G + IGGD GT FID + + AD + IV++GE+GG E + + Sbjct: 203 NIISHTTDGVYEGIAIGGDRYPGTTFIDHILRYEADPKCKIIVLLGEVGGVEEYRVIEAV 262 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KKPIV + G A + GHAG++ + A+ K AMK AG + Sbjct: 263 KNGQI---KKPIVAWAIGTCASMFKTEVQFGHAGSMANSDLETAKAKNAAMKSAGFYVPD 319 Query: 285 SPARIGRSLVELLGSL 300 + + L EL + Sbjct: 320 TFEDMPEVLAELYEKM 335 >gi|320031967|gb|EFW13924.1| succinyl-CoA synthetase, alpha subunit [Coccidioides posadasii str. Silveira] Length = 712 Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats. Identities = 128/318 (40%), Positives = 198/318 (62%), Gaps = 26/318 (8%) Query: 2 SILVDKNTKVLVQGLTG-----------------KAGTFHTEQAILYCQTQVVGGIHPKK 44 ++ + +TKVL QG TG K T + ++++ + T++VGG+ P Sbjct: 52 NLKIGADTKVLFQGFTGTHTYLFLYKEIYPKPNNKMATANVKESLQW-GTKIVGGVKPG- 109 Query: 45 GSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEG 104 G ++ +PVF +V A+E+ +A+ +YVP + AI E+IEAEIPL+V + E Sbjct: 110 ----VEGEHLGLPVFPSVRVAQEKARPDATAVYVPGNQTAAAIEEAIEAEIPLVVAVAEH 165 Query: 105 IPVLDMVRVKARLE-KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTL 162 +P+ D++R+ + L +S +RL+G NCPGI++ C+IG P F G VGI+++SGTL Sbjct: 166 VPIHDILRIHSILRTQSKTRLVGANCPGIISAIGKCRIGFQPLPCFSSGHVGIVAKSGTL 225 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 +YE V T++ GLGQS +G+GGD + GT+F+D L++F D+ T I++VGEIGG+AE + Sbjct: 226 SYETVASTTRAGLGQSLCIGMGGDVLAGTDFVDALKVFEHDDDTHGIIIVGEIGGTAEMD 285 Query: 223 AAQFLKDEAKR-GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 AA+++KD +R KPI+G V G AP GR MGHAGA + G+ A+ KI A+++AG Sbjct: 286 AAEWIKDYRRRTANPKPIMGLVGGIEAPHGRIMGHAGAWTAPGEPDAQMKIKALQDAGAV 345 Query: 282 IAPSPARIGRSLVELLGS 299 I P + G + LLG+ Sbjct: 346 IVDHPEKFGEGMKTLLGN 363 >gi|71004972|ref|XP_757152.1| hypothetical protein UM01005.1 [Ustilago maydis 521] gi|46096782|gb|EAK82015.1| hypothetical protein UM01005.1 [Ustilago maydis 521] Length = 1152 Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats. Identities = 87/315 (27%), Positives = 137/315 (43%), Gaps = 22/315 (6%) Query: 5 VDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPV 58 D NT+ LV GL + G + + V I+P G YW +PV Sbjct: 538 FDANTRSLVFGLQPRAIQGMLDFDFSCGRKTPSVAAMIYPFGGHHIQKFYWGTKETLLPV 597 Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKAR 116 +T++ EA + A+ V + + +E ++ +I + I EG+P + R Sbjct: 598 YTSIKEAVAKHPDADVVVNFASSRSVYSSTLEVLDCPQIRALALIAEGVPERHAREILHR 657 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 EK+ +IGP G + P +IG I+ ++R GSVG +S+SG ++ E Sbjct: 658 AEKAGVLIIGPATVGGIKPGCFRIGNSGGMMDNILASKLYRPGSVGYVSKSGGMSNELNN 717 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 S G + IGGD GT FID L + D + +V++GE+GG E + +K Sbjct: 718 ILSITTNGTYEGIAIGGDRYPGTTFIDHLLRYEQDPECKMLVLLGEVGGIEEYRVIEAVK 777 Query: 229 DEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 K KKPI+ + G A GHAG++ + A K AMK AG + + Sbjct: 778 ---KGTIKKPIIAWAIGTCAKMFTTEVQFGHAGSMANSDMETASAKNAAMKAAGFIVPDT 834 Query: 286 PARIGRSLVELLGSL 300 + + E+ L Sbjct: 835 FEDLPAVIREVYNKL 849 >gi|303320235|ref|XP_003070117.1| succinyl-CoA synthetase beta chain, putative [Coccidioides posadasii C735 delta SOWgp] gi|240109803|gb|EER27972.1| succinyl-CoA synthetase beta chain, putative [Coccidioides posadasii C735 delta SOWgp] Length = 712 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 128/318 (40%), Positives = 198/318 (62%), Gaps = 26/318 (8%) Query: 2 SILVDKNTKVLVQGLTG-----------------KAGTFHTEQAILYCQTQVVGGIHPKK 44 ++ + +TKVL QG TG K T + ++++ + T++VGG+ P Sbjct: 52 NLKIGADTKVLFQGFTGTHTYLFLYKEIYPKPNKKMATANVKESLQW-GTKIVGGVKPG- 109 Query: 45 GSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEG 104 G ++ +PVF +V A+E+ +A+ +YVP + AI E+IEAEIPL+V + E Sbjct: 110 ----VEGEHLGLPVFPSVRVAQEKARPDATAVYVPGNQTAAAIEEAIEAEIPLVVAVAEH 165 Query: 105 IPVLDMVRVKARLE-KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTL 162 +P+ D++R+ + L +S +RL+G NCPGI++ C+IG P F G VGI+++SGTL Sbjct: 166 VPIHDILRIHSILRTQSKTRLVGANCPGIISAIGKCRIGFQPLPCFSSGHVGIVAKSGTL 225 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 +YE V T++ GLGQS +G+GGD + GT+F+D L++F D+ T I++VGEIGG+AE + Sbjct: 226 SYETVASTTRAGLGQSLCIGMGGDVLAGTDFVDALKVFEHDDDTHGIIIVGEIGGTAEMD 285 Query: 223 AAQFLKDEAKR-GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 AA+++KD +R KPI+G V G AP GR MGHAGA + G+ A+ KI A+++AG Sbjct: 286 AAEWIKDYRRRTANPKPIMGLVGGIEAPHGRIMGHAGAWTAPGEPDAQMKIKALQDAGAV 345 Query: 282 IAPSPARIGRSLVELLGS 299 I P + G + LLG+ Sbjct: 346 IVDHPEKFGEGMKTLLGN 363 >gi|242216681|ref|XP_002474146.1| predicted protein [Postia placenta Mad-698-R] gi|220726691|gb|EED80632.1| predicted protein [Postia placenta Mad-698-R] Length = 1153 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 82/315 (26%), Positives = 133/315 (42%), Gaps = 22/315 (6%) Query: 5 VDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPV 58 D T+ V GL + G + + V I+P G YW +PV Sbjct: 538 FDGRTRAFVYGLQPRAIQGMLDFDYSCGREAPSVAAMIYPFGGHHIQKFYWGTKETLLPV 597 Query: 59 FTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKAR 116 +T+V EA ++ A+ V + + +E A+I I I EG+P + Sbjct: 598 YTSVEEAVKKHADADVVVNFASSRSVYSSTLEIFNFAQIKSIAIIAEGVPERHAREILHI 657 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 + +IGP G + P +IG I+ ++R GSVG +S+SG ++ E Sbjct: 658 AKSKGVLIIGPATVGGIKPGCFRIGNSGGMMDNIIASKLYRPGSVGYVSKSGGMSNELNN 717 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 S G + IGGD G+ FID L + D + +V++GE+GG E + +K Sbjct: 718 ILSLTTNGTYEGIAIGGDRYPGSTFIDHLLRYEQDPECKMLVLLGEVGGIEEYRVIEAVK 777 Query: 229 DEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 K +KPI+ + G A GHAG++ + A+ K +AM+ AG + + Sbjct: 778 ---KGTIRKPIIAWAIGTCAKMFTTEVQFGHAGSMANSDLETADAKNSAMRAAGFVVPDT 834 Query: 286 PARIGRSLVELLGSL 300 + + E L Sbjct: 835 FEDLPLVIRETYEKL 849 >gi|145243014|ref|XP_001394055.1| ATP-citrate synthase subunit 1 [Aspergillus niger CBS 513.88] gi|134078722|emb|CAK48284.1| unnamed protein product [Aspergillus niger] Length = 656 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 86/315 (27%), Positives = 137/315 (43%), Gaps = 22/315 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V G I+ G YW +P Sbjct: 37 LFHNKTRCFVYGMQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 96 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V++A + + V + + +E +E +I I I EG+P + Sbjct: 97 VYQDVSKAMAKHPDVDTVVNFASSRSVYSSTMELMECPQIRSIAIIAEGVPERRAREIMV 156 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 157 KAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 216 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + A+ + +V++GE+GG E + + Sbjct: 217 NIISQTTDGVYEGVAIGGDRYPGTTFIDHLLRYQAEPECKILVLLGEVGGVEEYRVIEAV 276 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KPIV + G A + GHAGA + A K AM+EAGI + Sbjct: 277 KN---GTITKPIVAWAIGTCASMFKTEVQFGHAGASANSDLETAVAKNKAMREAGIFVPE 333 Query: 285 SPARIGRSLVELLGS 299 + + ++L E+ Sbjct: 334 TFEDLPQTLKEVYDD 348 >gi|195029649|ref|XP_001987684.1| GH19829 [Drosophila grimshawi] gi|193903684|gb|EDW02551.1| GH19829 [Drosophila grimshawi] Length = 1100 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 80/316 (25%), Positives = 138/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 TK +V G+ + + + VV ++P K YW + +P Sbjct: 492 FFSNTTKAIVWGMQQRAVQSMLDFDFICRRDEPSVVAMVYPFTGDHKQKYYWGHKEILIP 551 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +++A + + V + A D+ +E +E +I + I EGIP ++ Sbjct: 552 VYKKMSDAIHKHKEVDVMVNFASLRSAFDSTLEVLEFPQIRTVAIIAEGIPENMTRKLII 611 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 612 EADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELN 671 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + + Sbjct: 672 NIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAAV 731 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KP+V + G A GHAG+ + + A K A++++G + Sbjct: 732 KDGRI---TKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKALRDSGAYVPD 788 Query: 285 SPARIGRSLVELLGSL 300 S +G + + L Sbjct: 789 SFDTLGELIHHVYSEL 804 >gi|331220513|ref|XP_003322932.1| ATP-citrate synthase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301922|gb|EFP78513.1| ATP-citrate synthase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1145 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 87/315 (27%), Positives = 140/315 (44%), Gaps = 22/315 (6%) Query: 5 VDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPV 58 D+ T+ LV GL + G + A + V I+P G YW +PV Sbjct: 529 FDETTRGLVYGLQPRAIQGMLDFDFACGRKKPSVAAMIYPFGGHHVQKFYWGTKETLLPV 588 Query: 59 FTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKAR 116 + T+AEA ++ A+ V + + ++++E +I I I EG+P + Sbjct: 589 YATIAEAVKKHPEADTLVNFSSSRSVYQSTLDALEIPQIKSIALIAEGVPERHAREILHL 648 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 EK +IGP G + P +IG I+ ++R GSV +S+SG ++ E Sbjct: 649 AEKKKVIIIGPATVGGIKPGCFRIGNTGGMMDNIISSKLYRPGSVAYVSKSGGMSNELNN 708 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 S G + IGGD GT FID + + AD + +V++GE+GG E + +K Sbjct: 709 ILSLTTNGTYEGIAIGGDRYPGTTFIDHMLRYEADPNCKMLVLLGEVGGVEEYRVIEAVK 768 Query: 229 DEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 KKPIV + G A GHAG++ + G A+ K AM+ AG + + Sbjct: 769 SGQI---KKPIVAWAIGTCAKMFTTEVQFGHAGSMANSDLGTADAKNKAMRAAGFIVPDT 825 Query: 286 PARIGRSLVELLGSL 300 + +L ++ L Sbjct: 826 FEDLPAALKKVYTGL 840 >gi|255956565|ref|XP_002569035.1| Pc21g20480 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590746|emb|CAP96945.1| Pc21g20480 [Penicillium chrysogenum Wisconsin 54-1255] Length = 655 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 84/315 (26%), Positives = 135/315 (42%), Gaps = 22/315 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V G I+ G YW +P Sbjct: 36 LFHNKTRCFVYGMQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 95 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E +E +I I I EG+P + Sbjct: 96 VYQDVEKAMAKHPDVDTVVNFASSRSVYSSTMELMENPQIRSIAIIAEGVPERRAREIMV 155 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 156 TAKEKGITIIGPATVGGIKPGAYKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 215 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + A+ + +V++GE+GG E + + Sbjct: 216 NIISQNTDGVFEGVAIGGDRYPGTTFIDHLLRYQAEPECKILVLLGEVGGVEEYRVIEAI 275 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KP+V + G A + GHAGA + A K AM+EAGI + Sbjct: 276 KN---GTITKPVVAWAIGTCASMFKTEVQFGHAGASANSDLETAVTKNKAMREAGIHVPE 332 Query: 285 SPARIGRSLVELLGS 299 + + + L ++ + Sbjct: 333 TFEDLPQMLKQVYEA 347 >gi|194882681|ref|XP_001975439.1| GG22311 [Drosophila erecta] gi|190658626|gb|EDV55839.1| GG22311 [Drosophila erecta] Length = 1095 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 80/316 (25%), Positives = 138/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 TK +V G+ + + + VV ++P K YW + +P Sbjct: 487 FFSNTTKAIVWGMQQRAVQSMLDFDFICRRDEPSVVAMVYPFTGDHKQKYYWGHKEILIP 546 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +++A + + V + A ++ +E ++ +I + I EGIP ++ Sbjct: 547 VYKKMSDAIHKHKEVDVMVNFASMRSAYESTLEVLDFPQIRTVAIIAEGIPENMTRKLII 606 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 607 EADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELN 666 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + L Sbjct: 667 NIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAAL 726 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KP+V + G A GHAG+ + + A K +++AG + Sbjct: 727 KDGRI---TKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKGLRDAGAYVPD 783 Query: 285 SPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 784 SFDTLGELIHHVYGEL 799 >gi|281363477|ref|NP_725514.2| ATP citrate lyase, isoform F [Drosophila melanogaster] gi|272432504|gb|AAM70940.2| ATP citrate lyase, isoform F [Drosophila melanogaster] Length = 1095 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 TK +V G+ + + + VV ++P K YW + +P Sbjct: 487 FFSNTTKAIVWGMQQRAVQSMLDFDFICRRDEPSVVAMVYPFTGDHKQKYYWGHKEILIP 546 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +++A + + V + A ++ +E +E +I + I EGIP ++ Sbjct: 547 VYKKMSDAIHKHKEVDVMVNFASMRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLII 606 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 607 EADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELN 666 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + L Sbjct: 667 NIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAAL 726 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KP+V + G A GHAG+ + + A K +++AG + Sbjct: 727 KDGRI---TKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKGLRDAGAYVPD 783 Query: 285 SPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 784 SFDTLGELIHHVYGEL 799 >gi|121699808|ref|XP_001268169.1| ATP citrate lyase, subunit 1, putative [Aspergillus clavatus NRRL 1] gi|119396311|gb|EAW06743.1| ATP citrate lyase, subunit 1, putative [Aspergillus clavatus NRRL 1] Length = 657 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 83/315 (26%), Positives = 135/315 (42%), Gaps = 22/315 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V G I+ G YW +P Sbjct: 38 LFHNKTRCFVYGMQPRAVQGMLDFDFICKRTTPSVAGIIYTFGGQFVSKMYWGTSETLLP 97 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ VA+A + + V + + +E ++ +I I I EG+P + Sbjct: 98 VYQDVAKAMAKHPDVDTVVNFASSRSVYSSTMELMQCPQIKSIAIIAEGVPERRAREIMV 157 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 158 TAREKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 217 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 +Q G + IGGD GT FID L + AD + ++++GE+GG E + + Sbjct: 218 NIIAQNTDGVHEGIAIGGDRYPGTTFIDHLLRYQADPECKILLLLGEVGGVEEYRVIEAV 277 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KPIV + G A + GHAGA + A +K AM+EAGI + Sbjct: 278 KN---GTITKPIVAWAIGTCASMFKTEVQFGHAGASANSQLETAVNKNKAMREAGIYVPD 334 Query: 285 SPARIGRSLVELLGS 299 + + + L ++ Sbjct: 335 TFEELPQLLKQVYDD 349 >gi|195583780|ref|XP_002081694.1| GD25577 [Drosophila simulans] gi|194193703|gb|EDX07279.1| GD25577 [Drosophila simulans] Length = 1095 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 TK +V G+ + + + VV ++P K YW + +P Sbjct: 487 FFSNTTKAIVWGMQQRAVQSMLDFDFICRRDEPSVVAMVYPFTGDHKQKYYWGHKEILIP 546 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +++A + + V + A ++ +E +E +I + I EGIP ++ Sbjct: 547 VYKKMSDAIHKHKEVDVMVNFASMRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLII 606 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 607 EADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELN 666 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + L Sbjct: 667 NIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAAL 726 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KP+V + G A GHAG+ + + A K +++AG + Sbjct: 727 KDGRI---TKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKGLRDAGAYVPD 783 Query: 285 SPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 784 SFDTLGELIHHVYGEL 799 >gi|195488393|ref|XP_002092296.1| GE14108 [Drosophila yakuba] gi|194178397|gb|EDW92008.1| GE14108 [Drosophila yakuba] Length = 1096 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 TK +V G+ + + + VV ++P K YW + +P Sbjct: 488 FFSNTTKAIVWGMQQRAVQSMLDFDFICRRDEPSVVAMVYPFTGDHKQKYYWGHKEILIP 547 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +++A + + V + A ++ +E +E +I + I EGIP ++ Sbjct: 548 VYKKMSDAIHKHKEVDVMVNFASMRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLII 607 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 608 EADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELN 667 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + L Sbjct: 668 NIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAAL 727 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KP+V + G A GHAG+ + + A K +++AG + Sbjct: 728 KDGRI---TKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKGLRDAGAYVPD 784 Query: 285 SPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 785 SFDTLGELIHHVYGEL 800 >gi|39977669|ref|XP_370222.1| ATP-citrate synthase subunit 1 [Magnaporthe oryzae 70-15] gi|145013764|gb|EDJ98405.1| ATP-citrate synthase subunit 1 [Magnaporthe oryzae 70-15] Length = 665 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 88/316 (27%), Positives = 133/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L + T+ V GL + G + V G I+ G YW +P Sbjct: 44 LFNDKTRCFVYGLQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 103 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E +E I I I EG+P + Sbjct: 104 VYQEVQKAVAKHPDVDTVVNFASSRSVYSSTLELMEYPNIKTIAIIAEGVPERRAREIAH 163 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P S KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 164 IAKKKGITIIGPATVGGIKPGSFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 223 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + AD + ++++GE+GG E + + + Sbjct: 224 NIISQNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPDCKILLLLGEVGGVEEYKVIEAV 283 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KPIV + G A + GHAG+ + A K +MKEAG + Sbjct: 284 KEGVI---TKPIVAWAIGTCASMFKTEVQFGHAGSFANSQLETAATKNKSMKEAGFYVPN 340 Query: 285 SPARIGRSLVELLGSL 300 + + L L L Sbjct: 341 TFEELPELLSSLYQKL 356 >gi|195334759|ref|XP_002034044.1| GM20101 [Drosophila sechellia] gi|194126014|gb|EDW48057.1| GM20101 [Drosophila sechellia] Length = 1095 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 TK +V G+ + + + VV ++P K YW + +P Sbjct: 487 FFSNTTKAIVWGMQQRAVQSMLDFDFICRRDEPSVVAMVYPFTGDHKQKYYWGHKEILIP 546 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +++A + + V + A ++ +E +E +I + I EGIP ++ Sbjct: 547 VYKKMSDAIHKHKEVDVMVNFASMRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLII 606 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 607 EADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELN 666 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + L Sbjct: 667 NIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAAL 726 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KP+V + G A GHAG+ + + A K +++AG + Sbjct: 727 KDGR---VTKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKGLRDAGAYVPD 783 Query: 285 SPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 784 SFDTLGELIHHVYGEL 799 >gi|115388095|ref|XP_001211553.1| ATP-citrate synthase subunit 1 [Aspergillus terreus NIH2624] gi|114195637|gb|EAU37337.1| ATP-citrate synthase subunit 1 [Aspergillus terreus NIH2624] Length = 656 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 83/315 (26%), Positives = 135/315 (42%), Gaps = 22/315 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V G I+ G YW +P Sbjct: 37 LFHNKTRCFVYGMQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 96 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V++A + + V + + +E ++ +I I I EG+P + Sbjct: 97 VYQDVSKAMAKHPDVDTVVNFASSRSVYSSTMELMQCPQIKAIAIIAEGVPERRAREIMV 156 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 157 TAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 216 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD GT FID L + A+ + +V++GE+GG E + + Sbjct: 217 NIISQTTDGVYEGIAIGGDRYPGTTFIDHLLRYQAEPECKILVLLGEVGGVEEYRVIEAV 276 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KP+V + G A + GHAGA + A K AM+EAGI + Sbjct: 277 KN---GTITKPVVAWAIGTCASMFKTEVQFGHAGASANSDLETAVAKNKAMREAGIHVPE 333 Query: 285 SPARIGRSLVELLGS 299 + + + L E+ Sbjct: 334 TFEDLPQLLKEVYDE 348 >gi|322698613|gb|EFY90382.1| ATP-citrate synthase subunit 1 [Metarhizium acridum CQMa 102] Length = 664 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 84/316 (26%), Positives = 135/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L + T+ V GL + G + V G I+ G YW +P Sbjct: 43 LFNDKTRCFVYGLQPRAVQGMLDFDFICKRKTPSVAGIIYTFGGQFVSKMYWGTSETLLP 102 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E ++ +I I I EG+P + Sbjct: 103 VYQQVDKAMAKHPDVDVVVNFASSRSVYSSTMELMQYPQIKTIAIIAEGVPERRAREIAH 162 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P S KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 163 VAKKKGVTIIGPATVGGIKPGSFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 222 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD GT FID + + AD + +V++GE+GG E + + + Sbjct: 223 NIISQNTDGVYEGIAIGGDRYPGTTFIDHMLRYQADPDCKILVLLGEVGGVEEYKVIEAV 282 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K KPIV + G A + GHAG+ + + A K +M+EAG + Sbjct: 283 KQGII---TKPIVAWAIGTCASMFKTEVQFGHAGSFANSQRETAATKNKSMREAGFHVPN 339 Query: 285 SPARIGRSLVELLGSL 300 + + L ++ L Sbjct: 340 TFEEMPAVLKQVYDKL 355 >gi|325096706|gb|EGC50016.1| ATP-citrate synthase subunit 1 [Ajellomyces capsulatus H88] Length = 659 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 84/316 (26%), Positives = 133/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V G I+ G YW +P Sbjct: 38 LFHNKTRCFVYGMQPRAVQGMLDFDFICKRTTPSVAGIIYTFGGQFVSKMYWGTSETLLP 97 Query: 58 VFTTV-AEAKERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V + + V + + +E ++ +I I I EG+P + Sbjct: 98 VYQAVGKAIAKHPDVDTVVNFASSRSVYSSTMELMQYPQIKSIAIIAEGVPERRAREIMV 157 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 158 AAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 217 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + AD + +V++GE+GG E + + Sbjct: 218 NIISQTTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPECKILVLLGEVGGVEEYRVIEAV 277 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 +D KP+V + G A + GHAGA + A K M+EAGI + Sbjct: 278 RD---GTITKPVVAWAIGTCASLFKTEVQFGHAGASANSELETAVMKNKCMREAGIHVPE 334 Query: 285 SPARIGRSLVELLGSL 300 + + ++L E+ L Sbjct: 335 TFEELPQTLAEVYKKL 350 >gi|281363473|ref|NP_523755.2| ATP citrate lyase, isoform D [Drosophila melanogaster] gi|281363475|ref|NP_001137674.2| ATP citrate lyase, isoform E [Drosophila melanogaster] gi|28372804|gb|AAD34754.2| LD21334p [Drosophila melanogaster] gi|272432502|gb|AAF58082.2| ATP citrate lyase, isoform D [Drosophila melanogaster] gi|272432503|gb|ACL83128.2| ATP citrate lyase, isoform E [Drosophila melanogaster] Length = 1112 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 TK +V G+ + + + VV ++P K YW + +P Sbjct: 504 FFSNTTKAIVWGMQQRAVQSMLDFDFICRRDEPSVVAMVYPFTGDHKQKYYWGHKEILIP 563 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +++A + + V + A ++ +E +E +I + I EGIP ++ Sbjct: 564 VYKKMSDAIHKHKEVDVMVNFASMRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLII 623 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 624 EADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELN 683 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + L Sbjct: 684 NIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAAL 743 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KP+V + G A GHAG+ + + A K +++AG + Sbjct: 744 KDGRI---TKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKGLRDAGAYVPD 800 Query: 285 SPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 801 SFDTLGELIHHVYGEL 816 >gi|19112994|ref|NP_596202.1| ATP citrate synthase subunit 1 (predicted) [Schizosaccharomyces pombe 972h-] gi|30912748|sp|Q9P7W3|ACL1_SCHPO RecName: Full=Probable ATP-citrate synthase subunit 1; AltName: Full=ATP-citrate (pro-S-)-lyase 1; AltName: Full=Citrate cleavage enzyme subunit 1 gi|6723921|emb|CAB66451.1| ATP citrate synthase subunit 1 (predicted) [Schizosaccharomyces pombe] Length = 615 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 87/316 (27%), Positives = 138/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVNVP 57 L K+T+ V G+ K G + V I+ + YW + +P Sbjct: 12 LFSKDTRAFVYGMQTKAVQGMLDFDYMCGRTVPSVAAIIYTFGSQSISKLYWGTKEILLP 71 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ T+ EA + + V + A + +E +E +I I I EG+P + Sbjct: 72 VYRTIEEACTKHPEVDVVVNFASSRSAYASTMELMEFPQIRCIAIIAEGVPERRAREILV 131 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ + +IGP G + P KIG I+ ++R GSV +S+SG ++ E Sbjct: 132 TSKEKNVVIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRPGSVAYVSKSGGMSNELN 191 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S G + IGGD GT FID L F AD A + +V++GE+GG E + + Sbjct: 192 NIISHTTDGVYEGIAIGGDRYPGTTFIDHLIRFEADPACKLMVLLGEVGGVEEYRVIEAV 251 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KKPIV + G + + GHAG+ + A K AM+EAGI + Sbjct: 252 KN---GTIKKPIVAWAIGTCSSMFKTEVQFGHAGSFANSELETAVAKNQAMREAGIYVPE 308 Query: 285 SPARIGRSLVELLGSL 300 + ++ L E+ L Sbjct: 309 TFEKLPALLQEVYEGL 324 >gi|154277252|ref|XP_001539467.1| ATP-citrate synthase subunit 1 [Ajellomyces capsulatus NAm1] gi|150413052|gb|EDN08435.1| ATP-citrate synthase subunit 1 [Ajellomyces capsulatus NAm1] gi|240280198|gb|EER43702.1| ATP-citrate synthase subunit 1 [Ajellomyces capsulatus H143] Length = 659 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 84/316 (26%), Positives = 133/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V G I+ G YW +P Sbjct: 38 LFHNKTRCFVYGMQPRAVQGMLDFDFICKRTTPSVAGIIYTFGGQFVSKMYWGTSETLLP 97 Query: 58 VFTTV-AEAKERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V + + V + + +E ++ +I I I EG+P + Sbjct: 98 VYQAVGKAIAKHPDVDTVVNFASSRSVYSSTMELMQYPQIKSIAIIAEGVPERRAREIMV 157 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 158 AAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 217 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + AD + +V++GE+GG E + + Sbjct: 218 NIISQTTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPECKILVLLGEVGGVEEYRVIEAV 277 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 +D KP+V + G A + GHAGA + A K M+EAGI + Sbjct: 278 RD---GTITKPVVAWAIGTCASLFKTEVQFGHAGASANSELETAVMKNKCMREAGIHVPE 334 Query: 285 SPARIGRSLVELLGSL 300 + + ++L E+ L Sbjct: 335 TFEELPQTLAEVYKKL 350 >gi|316973647|gb|EFV57211.1| ATP-citrate synthase [Trichinella spiralis] Length = 1157 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 89/346 (25%), Positives = 141/346 (40%), Gaps = 52/346 (15%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L NT+ +V G+ K + VV +P K Y+ + +P Sbjct: 489 LFTSNTRAIVWGMQVKAVQSMLDFDYVCQRKLPSVVAMTYPMTGDHKQKFYFGHKEILIP 548 Query: 58 VFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ ++A+A E+ A+ + + A DA +E+++ ++ I I EGIP ++ Sbjct: 549 VYKSMAKAIEKHPDASVLINFASLRSAYDATVEALQFPQVRCIAIIAEGIPENFTRKLIT 608 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 R E++ +IGP G + P KIG IM ++R GSV +SRSG ++ E Sbjct: 609 RAEQAGVTIIGPATVGGIKPGCFKIGNTGGMMDNIMASKLYRPGSVAYVSRSGGMSNELN 668 Query: 168 FQTSQEGLGQSTAVGIGGD------PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 SQ G V IGGD + F D L F D + +VM+GEIGG E Sbjct: 669 NIISQVTNGVYEGVAIGGDRKIFKIRYPCSTFCDHLLRFEDDPKVKMMVMLGEIGGVEEY 728 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAP---------------------------PGRTM 254 + + LK+ KKP+V + G A Sbjct: 729 KVCELLKN---GKIKKPLVAWCIGTCASFLPSEMVIMNCLNKCRQCKNRTVKVGVGLVQF 785 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GH+GA + K A K A+K+AG + + + + ++ L Sbjct: 786 GHSGASAAAEKETACSKNRALKDAGAHVPNTFDDLATCIKKIYEEL 831 >gi|115525206|ref|YP_782117.1| succinyl-CoA synthetase, alpha subunit [Rhodopseudomonas palustris BisA53] gi|115519153|gb|ABJ07137.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Rhodopseudomonas palustris BisA53] Length = 306 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 115/299 (38%), Positives = 179/299 (59%), Gaps = 13/299 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I++ K +VLVQG+TGK G+F TE+ + T++V G++PK+ G +PV+ + Sbjct: 2 IILRKEHRVLVQGITGKQGSFWTEK-MRSVGTRIVAGVNPKRAGETHLG----IPVYASA 56 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 A T + +V+++PP+ A +A +++IEA L+V +TE IP+ D + + A ++ + Sbjct: 57 RAAMAETPFDVAVMFIPPALAEEAALDAIEAGAQLLVVLTEHIPIHDQMVIHAAARRNGT 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSI---FRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R++GPN G++TP GIMPG F+ G VG++SRSG+L ++ GLGQS Sbjct: 117 RILGPNTAGLVTPGEGFAGIMPGHNGSIFQPGVVGVVSRSGSLGTLVSLNLTRAGLGQSA 176 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDP+ GT D LE D T ++V+VGEIGG+ EEEAA + KP+ Sbjct: 177 FIGIGGDPMIGTTTRDALEALDRDPRTRAVVLVGEIGGAMEEEAATY-----AARMTKPV 231 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 V F+AG+ +PPG+ MGHAGA++ G K A++ AG+ + +PA I ++ L Sbjct: 232 VAFIAGRASPPGKKMGHAGAIVGAAGGSYAGKREALERAGVTVVDTPAEIPDAVRARLA 290 >gi|23012767|ref|ZP_00052773.1| COG0074: Succinyl-CoA synthetase, alpha subunit [Magnetospirillum magnetotacticum MS-1] Length = 246 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 117/248 (47%), Positives = 162/248 (65%), Gaps = 8/248 (3%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV EA + T A S+ +V P A DAI+E+ +A + L+ IT+GIP DM+RVK Sbjct: 1 MPVFNTVKEAVDATGATTSITFVAPPFAADAIMEAADAGLKLVCSITDGIPAQDMMRVKR 60 Query: 116 RLEK----SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 L + + ++GPNC GI++P +GIMPG I+ G VG++SRSGTL YEA Q Sbjct: 61 YLRRYPKDKRTMVVGPNCAGIISPGKSMLGIMPGHIYLPGKVGVISRSGTLGYEAAAQMK 120 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + G+G ST+VGIGGDP+ G+ F+D L LF D TE+++M+GEIGG E EA+ ++K+ Sbjct: 121 ELGIGISTSVGIGGDPINGSSFLDHLALFEQDPETEAVLMIGEIGGPQEAEASAWIKEN- 179 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 KP++GFVAG TAP GR MGHAGA+IS A +K MK G+ +AP P GR Sbjct: 180 ---FSKPVIGFVAGLTAPKGRRMGHAGAIISATGDSAAEKAEIMKSYGLTVAPDPGSFGR 236 Query: 292 SLVELLGS 299 ++ ++L Sbjct: 237 TVADVLAR 244 >gi|310795720|gb|EFQ31181.1| CoA-ligase [Glomerella graminicola M1.001] Length = 662 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 87/316 (27%), Positives = 134/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L + T+ V GL + G + V G I+ G YW +P Sbjct: 41 LFNDKTRCFVYGLQPRAVQGMLDFDFICKRKTPSVAGIIYTFGGQFVSKMYWGTSETLLP 100 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V++A + + V + + +E +E +I I I EG+P + Sbjct: 101 VYQEVSKAMAKHPDVDVVVNFASSRSVYSSTMELMECPQIKTIAIIAEGVPERRAREIAH 160 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 161 KAQQKGITIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 220 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + G V IGGD GT FID L + AD + +V++GE+GG E + + Sbjct: 221 NIIANNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPDCKILVLLGEVGGVEEY---KVI 277 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K KPIV + G A + GHAGA + A+ K MKEAG + Sbjct: 278 KAVEDGVITKPIVAWAIGTCASMFKTEVQFGHAGAFANSTLETAKTKNEKMKEAGFYVPE 337 Query: 285 SPARIGRSLVELLGSL 300 + + + L L SL Sbjct: 338 TFEDMPQVLKALYDSL 353 >gi|292619409|ref|XP_001334195.3| PREDICTED: hypothetical protein LOC794259 [Danio rerio] Length = 2571 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 83/318 (26%), Positives = 137/318 (43%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L + TKV+V G+ + G + + VV ++P K YW + Sbjct: 1960 TTLFSRQTKVIVCGIQTQAVQGMLDFDYVCSRDEPSVVAMVYPYTGDHKQKFYWGHKEIL 2019 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 + V+ +A+A ++ + + + A D+ +E+++ +I I I EGIP ++ Sbjct: 2020 LSVYKNMADAMKKHPDVDVLINFASLRSAFDSTMETLQYPQIRTIAIIAEGIPEALTRKL 2079 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 ++ +IGP G + P KIG I+ ++R GSV +S SG ++ E Sbjct: 2080 IKTADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSSSGGMSNE 2139 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S G V IGGD G+ F+D + + + IV++GEIGG+ E Q Sbjct: 2140 LNNIISHTTDGVYEGVAIGGDRFPGSTFMDHVLRYQDTPGIKMIVVLGEIGGTEEYNICQ 2199 Query: 226 FLKDEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 + D KPIV + G A GHAGA + A K A++EAG + Sbjct: 2200 GITDGLI---TKPIVCWCIGTCATLLSSEVQFGHAGACATQVLETAVAKNQALREAGAFV 2256 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 2257 PNSFDELGDVIKFVYDDL 2274 >gi|115621242|ref|XP_791999.2| PREDICTED: similar to ATP citrate lyase [Strongylocentrotus purpuratus] gi|115925081|ref|XP_001197442.1| PREDICTED: similar to ATP citrate lyase [Strongylocentrotus purpuratus] Length = 1042 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 81/313 (25%), Positives = 131/313 (41%), Gaps = 16/313 (5%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L TK + G+ + G + + + VVG I+P K YW + +P Sbjct: 432 LFTNTTKSFIFGMQPRAVQGMLDFDHSCRRDEPSVVGMIYPFSGDHKQKFYWGHKEILIP 491 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKA 115 V+ ++A+A + + + + A D+ +E + +I I I EGIP + Sbjct: 492 VYKSMAKAMKTHPDVDVVINFASLRSAYDSTVEVLTYPQIKTIAIIAEGIPENKTRILID 551 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 K S +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 552 MANKKSVTIIGPATVGGIKPGCFKIGNTGGMLDNILSSKLYRPGSVSYVSRSGGMSNELN 611 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD GT F+D + + D + +VM+GE+GG+ E E + Sbjct: 612 NIISRNADGVYEGVAIGGDRYPGTTFLDHILRYHDDPEVKMLVMLGEVGGTEEYEVCSAI 671 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 + GHAGA +G + + K A++ AG + S Sbjct: 672 ESGRITKPMVAWCIGTCSTMFTSEVQFGHAGACANGERETSSAKNQALRVAGAYVPGSFD 731 Query: 288 RIGRSLVELLGSL 300 +G + E+ L Sbjct: 732 DLGDKIAEIFQGL 744 >gi|116205085|ref|XP_001228353.1| ATP-citrate synthase subunit 1 [Chaetomium globosum CBS 148.51] gi|88176554|gb|EAQ84022.1| ATP-citrate synthase subunit 1 [Chaetomium globosum CBS 148.51] Length = 663 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 86/316 (27%), Positives = 133/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L + T+ V GL + G + V G I+ G YW +P Sbjct: 41 LFNDKTRCFVYGLQPRAVQGMLDFDFICKRATPSVAGIIYTFGGQFVSKMYWGTSETLLP 100 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E +E +I I I EG+P + Sbjct: 101 VYQQVEKAMAKHPDVDTVVNFASSRSVYSSTLELMENPQIKTIAIIAEGVPERRAREIAH 160 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P S KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 161 VAQKKGVTIIGPATVGGIKPGSFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 220 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + AD + +V++GE+GG E + + + Sbjct: 221 NIISQNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPDCKILVLLGEVGGVEEYKVIEAV 280 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K KPIV + G A + GHAG+ + A K +M++AG + Sbjct: 281 KQGVI---TKPIVAWAIGTCASMFKTEVQFGHAGSFANSQLETAAMKNQSMRDAGFHVPS 337 Query: 285 SPARIGRSLVELLGSL 300 + + L + L Sbjct: 338 TFEDMPALLKSVYDKL 353 >gi|146304344|ref|YP_001191660.1| succinyl-CoA synthetase subunit alpha [Metallosphaera sedula DSM 5348] gi|145702594|gb|ABP95736.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Metallosphaera sedula DSM 5348] Length = 263 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 123/269 (45%), Positives = 169/269 (62%), Gaps = 9/269 (3%) Query: 28 AILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAI 87 +L T++V G+ P KG T G VPV+ TV EA + +AS+I+VP A +A+ Sbjct: 1 MMLKYGTKIVAGVTPGKGGTQVNG----VPVYDTVKEAVKEHEIDASIIFVPARFASEAV 56 Query: 88 IESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI 147 E+++A I L+ ITE IPV+D+ + +R+IGPNCPG++ P +GI+P Sbjct: 57 YEAVDAGIKLVTVITEHIPVVDVAKFVRYARARGTRIIGPNCPGLIVPGESLLGILPAKY 116 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 FRKG+VGI+SRSGTLTYE LGQST +GIGGDP+ GT+ +V++ F D TE Sbjct: 117 FRKGTVGIVSRSGTLTYEVSHLVGD--LGQSTVIGIGGDPIIGTQLQEVVQEFDKDNNTE 174 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 +IV++GEIGG+ EE AQ K+ KKPIVG++AG TAP + MGHAGAV+ G G Sbjct: 175 AIVIIGEIGGTMEERVAQLKKE---GKIKKPIVGYIAGLTAPREKRMGHAGAVVYMGMGT 231 Query: 268 AEDKINAMKEAGICIAPSPARIGRSLVEL 296 E KI A K+A I +A +P I L ++ Sbjct: 232 FESKIEAFKKADIPVAKTPYEIRDILTKI 260 >gi|302412753|ref|XP_003004209.1| ATP-citrate synthase subunit 1 [Verticillium albo-atrum VaMs.102] gi|261356785|gb|EEY19213.1| ATP-citrate synthase subunit 1 [Verticillium albo-atrum VaMs.102] Length = 615 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 86/316 (27%), Positives = 130/316 (41%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L + T+ V GL + G + V G I+ G YW +P Sbjct: 34 LFNDKTRCFVYGLQPRAVQGMLDFDFICKRKTPSVAGIIYTFGGQFVSKMYWGTSETLLP 93 Query: 58 VFTTV-AEAKERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V + + V + + +E +E +I I I EG+P + Sbjct: 94 VYQEVPKAIAKHPDVDTVVNFASSRSVYSSTMELMEFPQIKTIAIIAEGVPERRAREIAH 153 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + K +IGP G + P KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 154 KAAKKGITIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 213 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S G V IGGD GT FID L + AD + +V++GE+GG E + + Sbjct: 214 NIISNNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPECKVLVLLGEVGGVEEY---KVI 270 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K + KPIV + G A + GHAGA + A+ K MKEAG + Sbjct: 271 KAVEEGVITKPIVAWAIGTCASMFKTEVQFGHAGAFANSTLETAKTKNEKMKEAGFHVPD 330 Query: 285 SPARIGRSLVELLGSL 300 + + L ++ L Sbjct: 331 TFEDMPNVLKQVYDKL 346 >gi|157105391|ref|XP_001648848.1| ATP-citrate synthase [Aedes aegypti] gi|108880117|gb|EAT44342.1| ATP-citrate synthase [Aedes aegypti] Length = 1127 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 85/316 (26%), Positives = 137/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 + TK LV G+ + + + VV ++P K YW V +P Sbjct: 519 MFTNRTKALVWGMQTRAVQSMLDFDFICRREEPSVVAMVYPFTGYHKQKFYWGHKEVLIP 578 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V++ ++EA + A+ V + A ++ +E ++ +I I I EGIP ++ Sbjct: 579 VYSKMSEAINKHKEADVLVNFASLRSAYESSMEVLDYPQIRTIAIIAEGIPENLTRKLNM 638 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 639 AAREKNVSIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELN 698 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S G V IGGD GT F+D + + AD + IV++GE+GG E E + L Sbjct: 699 NIISLTTNGVFEGVAIGGDRYPGTTFMDHILRYQADPDAKMIVLLGEVGGVEEYEVCEAL 758 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 +D KP+V + G A GHAG+ + + A K A+ AG + Sbjct: 759 QDGRI---TKPLVAWCIGTCAGMFTSEVQFGHAGSCANSDRETATAKNKALAAAGAHVPD 815 Query: 285 SPARIGRSLVELLGSL 300 S +G + + L Sbjct: 816 SFDNLGDLVGSVYADL 831 >gi|30912679|sp|O93988|ACL1_SORMK RecName: Full=ATP-citrate synthase subunit 1; AltName: Full=ATP-citrate (pro-S-)-lyase 1; AltName: Full=Citrate cleavage enzyme subunit 1 gi|4107343|emb|CAA12224.1| ATP citrate lyase [Sordaria macrospora] gi|7160185|emb|CAB76165.1| ATP citrate lyase, subunit 1 [Sordaria macrospora] gi|289614489|emb|CBI58773.1| ATP citrate lyase subunit 1 [Sordaria macrospora] Length = 674 Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 87/316 (27%), Positives = 133/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L ++ T+ V GL + G + V G I+ G YW +P Sbjct: 52 LFNEKTRCFVYGLQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 111 Query: 58 VFTTV-AEAKERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V + + V + + +E +E +I I I EG+P + Sbjct: 112 VYQEVQKAIAKHPDVDVVVNFASSRSVYSSTMELMEHPQIKTIAIIAEGVPERRAREIAY 171 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 172 VAKKKGITIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 231 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + AD A + +V++GE+GG E + + + Sbjct: 232 NIISQTTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPACKILVLLGEVGGVEEYKVIEAV 291 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K KPIV + G A + GHAGA + A K +M+EAG + Sbjct: 292 KQGII---TKPIVAWAIGTCASMFKTEVQFGHAGAFANSQLETAATKNKSMREAGFYVPD 348 Query: 285 SPARIGRSLVELLGSL 300 + + L ++ L Sbjct: 349 TFEDMPALLKQVYDKL 364 >gi|302505751|ref|XP_003014582.1| hypothetical protein ARB_07144 [Arthroderma benhamiae CBS 112371] gi|291178403|gb|EFE34193.1| hypothetical protein ARB_07144 [Arthroderma benhamiae CBS 112371] Length = 292 Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 135/293 (46%), Positives = 172/293 (58%), Gaps = 44/293 (15%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GT + T VVGG +PKK G PVF + Sbjct: 35 NLRINADTKVIFQGFTGKQGTINA-----RIGTNVVGGTNPKKAGETHLGK----PVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA + T A AS I+VP L Sbjct: 86 VEEAVKETGATASAIFVP---------------------------------CHQELTSKK 112 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 + L+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 113 LIHSIVSLKEFLSMGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLVV 172 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA FLK E K KP V Sbjct: 173 GIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAAFLKSENKA--NKPAVS 230 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AG +APPGR MGHAGA++SGGKGGA+ KI A+++AG+ + SPA +G++L+ Sbjct: 231 FIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALQDAGVIVERSPASLGKTLL 283 >gi|302658619|ref|XP_003021011.1| hypothetical protein TRV_04876 [Trichophyton verrucosum HKI 0517] gi|291184886|gb|EFE40393.1| hypothetical protein TRV_04876 [Trichophyton verrucosum HKI 0517] Length = 292 Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats. Identities = 135/293 (46%), Positives = 172/293 (58%), Gaps = 44/293 (15%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GT + T VVGG +PKK G PVF + Sbjct: 35 NLRINADTKVIFQGFTGKQGTINA-----CIGTNVVGGTNPKKAGETHLGK----PVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS 121 V EA + T A AS I+VP L Sbjct: 86 VEEAVKETGATASAIFVP---------------------------------CHQELTSKK 112 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 + L+ CKIGIMPG I ++G +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 113 LIHSIVSLKEFLSMGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQTTQAGLGQSLVV 172 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP GT FID L +FL DE T+ I+M+GEIGGSAEE+AA FLK E K KP V Sbjct: 173 GIGGDPFSGTNFIDCLRVFLEDEETDGIIMIGEIGGSAEEDAAAFLKSENKA--NKPAVS 230 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F+AG +APPGR MGHAGA++SGGKGGA+ KI A+++AG+ + SPA +G++L+ Sbjct: 231 FIAGISAPPGRRMGHAGAIVSGGKGGADSKIAALQDAGVIVERSPASLGKTLL 283 >gi|85110776|ref|XP_963626.1| ATP-citrate synthase subunit 1 [Neurospora crassa OR74A] gi|30912708|sp|Q8X097|ACL1_NEUCR RecName: Full=Probable ATP-citrate synthase subunit 1; AltName: Full=ATP-citrate (pro-S-)-lyase 1; AltName: Full=Citrate cleavage enzyme subunit 1 gi|18376006|emb|CAB91740.2| probable ATP citrate lyase subunit 1 [Neurospora crassa] gi|28925312|gb|EAA34390.1| ATP-citrate synthase subunit 1 [Neurospora crassa OR74A] Length = 670 Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats. Identities = 85/316 (26%), Positives = 130/316 (41%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L + T+ V GL + G + V G I+ G YW +P Sbjct: 48 LFNDKTRCFVYGLQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 107 Query: 58 VFTTV-AEAKERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V + + V + + +E +E +I I I EG+P + Sbjct: 108 VYQEVPKAIAKHPDVDVVVNFASSRSVYSSTMELMEYPQIKTIAIIAEGVPERRAREIAY 167 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 168 VAKKKGITIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 227 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + AD + +V++GE+GG E + + Sbjct: 228 NIISQTTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPDCKILVLLGEVGGVEEY---KVI 284 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 + KPIV + G A + GHAGA + A K +M+EAG + Sbjct: 285 DAVKQGIITKPIVAWAIGTCASMFKTEVQFGHAGAFANSQLETAATKNKSMREAGFYVPD 344 Query: 285 SPARIGRSLVELLGSL 300 + + L ++ L Sbjct: 345 TFEDMPALLKQVYDKL 360 >gi|270008566|gb|EFA05014.1| hypothetical protein TcasGA2_TC015096 [Tribolium castaneum] Length = 1089 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 85/316 (26%), Positives = 137/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 + TK +V G+ + + + VV I+P K YW + +P Sbjct: 480 MFTNKTKSIVWGMQTRAVQSMLDFDFVCSRPEPSVVAIIYPFTGDHKQKFYWGHKEILIP 539 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ + +A + A+ V + A + +E++E +I I I EGIP ++ Sbjct: 540 VYKKMNDAMTKHPEADVLVNFASLRSAYQSTVETMEFPQIRTIAIIAEGIPENQTRKLIK 599 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 LANEKKVAIIGPATVGGVKPGCFKIGNTGGMMDNILHSKLYRSGSVAYVSRSGGMSNELN 659 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD GT F+D + + DE + I+++GE+GG E E L Sbjct: 660 NIVSKATDGVYEGVAIGGDRYPGTTFMDHIMRYQGDENVKMIILLGEVGGVEEYEVCNAL 719 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ + KP+V + G A GHAG+ + + A K A+K AG + Sbjct: 720 KN---KIITKPLVAWCIGTCAGMFTSEVQFGHAGSCANSNQETATAKNEALKAAGAHVPA 776 Query: 285 SPARIGRSLVELLGSL 300 S +G + E+ L Sbjct: 777 SFDYLGEVIQEVYEKL 792 >gi|189238364|ref|XP_001808341.1| PREDICTED: similar to ATP-citrate synthase [Tribolium castaneum] Length = 1092 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 85/316 (26%), Positives = 137/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 + TK +V G+ + + + VV I+P K YW + +P Sbjct: 483 MFTNKTKSIVWGMQTRAVQSMLDFDFVCSRPEPSVVAIIYPFTGDHKQKFYWGHKEILIP 542 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ + +A + A+ V + A + +E++E +I I I EGIP ++ Sbjct: 543 VYKKMNDAMTKHPEADVLVNFASLRSAYQSTVETMEFPQIRTIAIIAEGIPENQTRKLIK 602 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 603 LANEKKVAIIGPATVGGVKPGCFKIGNTGGMMDNILHSKLYRSGSVAYVSRSGGMSNELN 662 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD GT F+D + + DE + I+++GE+GG E E L Sbjct: 663 NIVSKATDGVYEGVAIGGDRYPGTTFMDHIMRYQGDENVKMIILLGEVGGVEEYEVCNAL 722 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ + KP+V + G A GHAG+ + + A K A+K AG + Sbjct: 723 KN---KIITKPLVAWCIGTCAGMFTSEVQFGHAGSCANSNQETATAKNEALKAAGAHVPA 779 Query: 285 SPARIGRSLVELLGSL 300 S +G + E+ L Sbjct: 780 SFDYLGEVIQEVYEKL 795 >gi|225557292|gb|EEH05578.1| ATP-citrate synthase subunit 1 [Ajellomyces capsulatus G186AR] Length = 748 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 84/316 (26%), Positives = 133/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V G I+ G YW +P Sbjct: 127 LFHNKTRCFVYGMQPRAVQGMLDFDFICKRTTPSVAGIIYTFGGQFVSKMYWGTSETLLP 186 Query: 58 VFTTV-AEAKERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V + + V + + +E ++ +I I I EG+P + Sbjct: 187 VYQAVGKAIAKHPDVDTVVNFASSRSVYSSTMELMQYPQIKSIAIIAEGVPERRAREIMV 246 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 247 AAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 306 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + AD + +V++GE+GG E + + Sbjct: 307 NIISQTTDGVYEGVAIGGDRYPGTTFIDHLLRYQADSECKILVLLGEVGGVEEYRVIEAV 366 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 +D KP+V + G A + GHAGA + A K M+EAGI + Sbjct: 367 RD---GTITKPVVAWAIGTCASLFKTEVQFGHAGASANSELETAVMKNKCMREAGIHVPE 423 Query: 285 SPARIGRSLVELLGSL 300 + + ++L E+ L Sbjct: 424 TFEELPQTLAEVYKKL 439 >gi|124485313|ref|YP_001029929.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methanocorpusculum labreanum Z] gi|124362854|gb|ABN06662.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Methanocorpusculum labreanum Z] Length = 291 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 132/299 (44%), Positives = 181/299 (60%), Gaps = 13/299 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILY----CQTQVVGGIHPKKGSTYWTGGNVNVPV 58 I KNT +LVQG TG G FH Y T +V G+ P K G VPV Sbjct: 2 IYAGKNTGILVQGATGSQGKFHINLMNAYARQVGGTGIVAGMTPGKAGQDVFG----VPV 57 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V +A + ASVI+VP G GDAI+E+ +A IP IV ITE +PV D++R A Sbjct: 58 YNSVVDAMDEHEIGASVIFVPAGGCGDAIMEAADARIPTIVTITEHVPVHDIMRAVAYAG 117 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 SR+IGPNCPG+L PD CK+GI+P ++ RKG VG++SRSGTLTY+ + + + G GQS Sbjct: 118 SRGSRVIGPNCPGMLVPDECKLGIIPANLCRKGDVGVISRSGTLTYQVISELTSAGFGQS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GIGGD V G F +V++ F AD T+++V++GE+GGS E E A+ D P Sbjct: 178 GIIGIGGDAVIGQTFSEVMDEFHADGRTKTVVLIGEVGGSLEIEGARRALDIG-----MP 232 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 IV ++AG +AP + MGHAGA++ GG+G A KI ++ I +A P+ I + LL Sbjct: 233 IVSYIAGVSAPKEKRMGHAGAIVEGGEGDAASKIERLRALDIPVATRPSEIPDLIRRLL 291 >gi|284045664|ref|YP_003396004.1| CoA-binding protein [Conexibacter woesei DSM 14684] gi|283949885|gb|ADB52629.1| CoA-binding domain protein [Conexibacter woesei DSM 14684] Length = 307 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 119/305 (39%), Positives = 170/305 (55%), Gaps = 18/305 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC-QTQVVGGIHPKKGSTYWTGGNVNVPVF 59 MSILVD T +VQG+TG+ T + + Y +VVGG+ P + G VPVF Sbjct: 1 MSILVDATTTFIVQGITGREAVNLTRECLDYGAGARVVGGVTPGRKGREVHG----VPVF 56 Query: 60 TTVAEAKERTAA--NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 TVA+A E A + SV+ VPP+ DA++E++ I LIV +TE IP D+ + Sbjct: 57 DTVAQAVEHHGAPIDGSVVTVPPAFTKDAVLEAVANGIKLIVIVTERIPRRDVAVMVEFA 116 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIM------PGSIFRKGSVGILSRSGTLTYEAVFQTS 171 +R+IGPNC GI+ PD K+G + + G VG++SRSG +T E + Sbjct: 117 SAHGARIIGPNCLGIIVPDVIKMGGIGGPAKDAAKAYSPGPVGVISRSGGMTTEMSSTLT 176 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 GLGQSTAV IGGD + G+ + +++ LF ADE T++IV+ E GG E E A ++K+ Sbjct: 177 AAGLGQSTAVSIGGDAIIGSSYAELMPLFEADEQTQAIVIYTEPGGRMEAELAAWVKEHD 236 Query: 232 KRGRKKPIVGFVAGKTAP--PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 R PIV F+AG+ PG + GHAG ++ G A +KI + EAGI +A + I Sbjct: 237 SR---LPIVAFMAGRFMDEMPGMSFGHAGTIVEGKADTAAEKIERLAEAGIVVAEEISEI 293 Query: 290 GRSLV 294 + Sbjct: 294 PGIVK 298 >gi|330834512|ref|YP_004409240.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Metallosphaera cuprina Ar-4] gi|329566651|gb|AEB94756.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Metallosphaera cuprina Ar-4] Length = 263 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 112/272 (41%), Positives = 171/272 (62%), Gaps = 9/272 (3%) Query: 28 AILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAI 87 ++ T++V G+ P KG + G +PV+ TV EA + +AS+I+VP A +A+ Sbjct: 1 MMMRYGTKIVAGVTPGKGGSDVLG----IPVYDTVKEATKEHEIDASIIFVPAKFASEAV 56 Query: 88 IESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI 147 E++++ I L+V ITE IPV+D+ + + +R++GPNCPG++ P +GI+P Sbjct: 57 YEAVDSGIGLVVVITEHIPVVDVAKFVRYAKSRGTRIVGPNCPGLIVPGESLLGILPSKY 116 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 F+KG+VGI+SRSGTLTYE ++ GQST +GIGGDP+ GT +V++ F D+ T+ Sbjct: 117 FKKGNVGIVSRSGTLTYEVAHLLNET--GQSTVIGIGGDPIIGTSLQEVVQEFEEDQQTD 174 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 +IV++GEIGG+ EE+ AQ K+ KPIV ++AG TAP + MGHAGAV+ G G Sbjct: 175 AIVIIGEIGGTMEEKVAQLKKE---GKLTKPIVAYIAGLTAPKEKRMGHAGAVVYMGMGT 231 Query: 268 AEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 E K+ ++A I +A +P I L ++L Sbjct: 232 FESKVEMFRKADIPVAKTPYEIRDVLTKILRK 263 >gi|119471597|ref|XP_001258190.1| ATP citrate lyase, subunit 1, putative [Neosartorya fischeri NRRL 181] gi|119406342|gb|EAW16293.1| ATP citrate lyase, subunit 1, putative [Neosartorya fischeri NRRL 181] Length = 657 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 82/315 (26%), Positives = 133/315 (42%), Gaps = 22/315 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V G I+ G YW +P Sbjct: 38 LFHNKTRCFVYGMQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 97 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ A+A + + V + + +E + +I I I EG+P + Sbjct: 98 VYQDAAKAMAKHPDVDTVVNFASSRSVYSSTMELMNYPQIKSIAIIAEGVPERRAREIMV 157 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 158 IAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 217 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD GT FID L + AD + ++++GE+GG E + + Sbjct: 218 NIISQTTDGVHEGIAIGGDRYPGTTFIDHLLRYQADPDCKILLLLGEVGGVEEYRVIEAV 277 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KP+V + G A + GHAGA + A K AM+EAGI + Sbjct: 278 KN---GTITKPLVAWAIGTCASMFKTEVQFGHAGASANSQLETAVYKNKAMREAGIHVPD 334 Query: 285 SPARIGRSLVELLGS 299 + + + L ++ Sbjct: 335 TFEELPQLLKQVYED 349 >gi|118575315|ref|YP_875058.1| succinyl-CoA synthetase, alpha subunit [Cenarchaeum symbiosum A] gi|118193836|gb|ABK76754.1| succinyl-CoA synthetase, alpha subunit [Cenarchaeum symbiosum A] Length = 304 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 110/285 (38%), Positives = 161/285 (56%), Gaps = 8/285 (2%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V+VQG+TGK G+ HT Y T + G+ ++G+ + G +P++ + EA E T Sbjct: 22 VVVQGITGKFGSTHTRLMKEY-GTNIAAGVTLREGAKDFEG----IPLYGNIGEAVEATG 76 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 A S ++VP A +++EA I L+V I E +PV D + + K + +IGPN P Sbjct: 77 AQISAMFVPAKFFLSAAKDALEAGIKLLVAIPEHVPVRDTLELLELARKKDAIVIGPNTP 136 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G++ P+ K+GIMP F+ G V +LS+SGTL YE +Q G GQ+ +GIGGDP+ G Sbjct: 137 GVIIPEVIKVGIMPAGPFKLGDVAVLSKSGTLLYEISNALTQAGFGQAITIGIGGDPING 196 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 T ID E+ +V+VGEIGG AEE AQ + + KP V ++AG+ AP Sbjct: 197 TRLIDAFEMVREIPGLRGLVVVGEIGGDAEELLAQRITE---TKFNKPTVAYIAGRAAPK 253 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 + MGHAGA++ G G AE KI+ +A + +A PA + L Sbjct: 254 EKRMGHAGAIVMGNYGSAESKISMFNKANVPVAKRPAEVPILLAR 298 >gi|312116114|ref|YP_004013710.1| CoA-binding protein [Rhodomicrobium vannielii ATCC 17100] gi|311221243|gb|ADP72611.1| CoA-binding domain protein [Rhodomicrobium vannielii ATCC 17100] Length = 294 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 121/299 (40%), Positives = 187/299 (62%), Gaps = 13/299 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 +++ + KVL+QGLTGK GTF E+ + C TQV GG++PK+ G VPVF + Sbjct: 1 MILRREHKVLIQGLTGKQGTFWAEKMMA-CGTQVRGGVNPKRAGETHLG----VPVFASA 55 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA + SV+++PP+ A DA +++IEA + ++ +TE IP+ D++ + A +K ++ Sbjct: 56 CEAMRSGHFDISVMFIPPAAAKDAALDAIEAGVKQLIVLTEHIPLQDVLMMHAAAKKRNT 115 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSI---FRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R++GPN G++TP GIMPG F+ G VG++SRSG+L +++GLGQS Sbjct: 116 RIVGPNTAGLVTPGEAFAGIMPGHNAQIFQPGFVGVISRSGSLGTLICLNLTRDGLGQSA 175 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +GIGGDPV GT + L D+ TE++V+VGEIGG+ EE AA KP+ Sbjct: 176 FLGIGGDPVIGTTTCEALVALDEDKKTEAVVLVGEIGGAMEEAAA-----AYAATMSKPV 230 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + F+AG++APPG+TMGHAGA++SGG+G + K A+++AG+ + P + ++ L Sbjct: 231 IAFIAGRSAPPGKTMGHAGAIVSGGRGTYQSKREALEKAGVKVVDMPYEVAPAVKAALA 289 >gi|169772625|ref|XP_001820781.1| ATP-citrate synthase subunit 1 [Aspergillus oryzae RIB40] gi|83768642|dbj|BAE58779.1| unnamed protein product [Aspergillus oryzae] Length = 656 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 84/313 (26%), Positives = 132/313 (42%), Gaps = 22/313 (7%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ K G + V G I+ G YW +P Sbjct: 37 LFHNKTRCFVYGMQPKAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 96 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V++A + + V + + +E + +I I I EG+P + Sbjct: 97 VYQDVSKAMAKHPDVDTVVNFASSRSVYSSTMELMNCPQIKSIAIIAEGVPERRAREILV 156 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 157 TAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 216 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + + + +V++GE+GG E + + Sbjct: 217 NIVSQNTDGVYEGVAIGGDRYPGTTFIDHLLRYQNEPECKILVLLGEVGGVEEYRVIEAV 276 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KPIV + G A + GHAGA + A K AM+EAGI + Sbjct: 277 KN---GTITKPIVAWAIGTCASMFKTEVQFGHAGASANSDLETAVAKNKAMREAGIHVPE 333 Query: 285 SPARIGRSLVELL 297 + + L ++ Sbjct: 334 TFEDMPGVLKQVY 346 >gi|51092031|gb|AAT94429.1| RE70805p [Drosophila melanogaster] Length = 1112 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 80/316 (25%), Positives = 137/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 TK +V G+ + + + VV ++P K YW + +P Sbjct: 504 FFSNTTKAIVWGMQQRAVQSMLDFDFICRRDEPSVVAMVYPFTGDHKQKYYWGHKEILIP 563 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +++A + + V + A ++ +E +E +I + I EGIP ++ Sbjct: 564 VYKKMSDAIHKHKEVDVMVNFASMRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLII 623 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 624 EADKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELN 683 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + L Sbjct: 684 NIISKATDGVIEGIAIGGDRYPGSTFMDHILRYQADPETKLIVLLGEVGGTEEYDVCAAL 743 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KP+V + G A GHAG+ + + A K +++AG + Sbjct: 744 KDGRI---TKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKGLRDAGAYVPD 800 Query: 285 SPARIGRSLVELLGSL 300 S + + + G L Sbjct: 801 SFDTLSELIHHVYGEL 816 >gi|225684099|gb|EEH22383.1| ATP-citrate synthase [Paracoccidioides brasiliensis Pb03] Length = 725 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 84/316 (26%), Positives = 133/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V G I+ G YW +P Sbjct: 104 LFHDKTRCFVYGMQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 163 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E ++ +I LI I EG+P + Sbjct: 164 VYQEVEKAMSKHPDVDTVVNFASSRSVYSSTMELMQYPQIKLIAIIAEGVPERRAREIMV 223 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 224 AAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 283 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + AD + ++++GE+GG E + Sbjct: 284 NIISQNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPKCKILLLLGEVGGVEEYRVIDAV 343 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 D KP+V + G A + GHAGA + A K M+E+GI + Sbjct: 344 HD---GTITKPVVAWAIGTCASLFKTEVQFGHAGASANSELETAVMKNKYMRESGIHVPD 400 Query: 285 SPARIGRSLVELLGSL 300 + + R L ++ L Sbjct: 401 TFEELPRVLADVYKKL 416 >gi|209885855|ref|YP_002289712.1| succinyl-CoA synthase, alpha subunit [Oligotropha carboxidovorans OM5] gi|209874051|gb|ACI93847.1| succinyl-CoA synthase, alpha subunit [Oligotropha carboxidovorans OM5] Length = 296 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 131/290 (45%), Positives = 187/290 (64%), Gaps = 13/290 (4%) Query: 10 KVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT 69 KVLVQG+TGK GTF +E+ + T V G++PK+ + G VP++ + EA + T Sbjct: 8 KVLVQGMTGKQGTFWSER-MREMGTDVAAGVNPKRAGETYLG----VPIYGSAVEATKET 62 Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC 129 + SVI++PPS A AII++I+A I IV +TE IP D++ + ARL S SR+IGPN Sbjct: 63 PCDVSVIFIPPSMAKAAIIDAIDAGIGTIVTLTEHIPAHDVLEIFARLRLSKSRIIGPNT 122 Query: 130 PGILTPDSCKIGIMPGSI---FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 GI+TP +GIMPG F+ G VG++SRSG+L ++ LGQS +GIGGD Sbjct: 123 AGIVTPGEGFVGIMPGHNPNIFKPGRVGVISRSGSLGTLMCLNLTRADLGQSAFIGIGGD 182 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P+ GT D L D T+++V+VGEIGG+ EEEAA E R KKPIV F+AG+ Sbjct: 183 PIIGTTTRDALIELDRDAKTDAVVLVGEIGGAMEEEAA-----EYARTMKKPIVSFIAGR 237 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++PP + MGHAGA+++GG+GG + K A+++AGI +A +PA + L ++ Sbjct: 238 SSPPDKKMGHAGAIVTGGRGGYDSKRAALEKAGIRVANTPAEVVTLLKQV 287 >gi|171689596|ref|XP_001909738.1| hypothetical protein [Podospora anserina S mat+] gi|170944760|emb|CAP70871.1| unnamed protein product [Podospora anserina S mat+] Length = 668 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 83/316 (26%), Positives = 132/316 (41%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L + T+ V G+ + G + V G I+ G YW +P Sbjct: 46 LFNDKTRCFVYGMQPRAVQGMLDFDFICKRATPSVAGIIYTFGGQFVSKMYWGTSETLLP 105 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E +E +I I I EG+P + Sbjct: 106 VYQEVPKAISKHPDVDVVVNFASSRSVYQSTMELMEYPQIKTIAIIAEGVPERRAREIAH 165 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 166 IAKKKGVTIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 225 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + G V IGGD GT FID L + AD + +V++GE+GG E + + Sbjct: 226 NIIANNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPGCKILVLLGEVGGVEEY---KVI 282 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 + KPIV + G A + GHAGA + A+ K +M+EAG + Sbjct: 283 DAVKQGIITKPIVAWAIGTCASMFKTEVQFGHAGAFANSQLETAKMKNESMREAGFYVPE 342 Query: 285 SPARIGRSLVELLGSL 300 + + L ++ L Sbjct: 343 TFEDMPALLGQVYEKL 358 >gi|226293494|gb|EEH48914.1| ATP-citrate synthase subunit 1 [Paracoccidioides brasiliensis Pb18] Length = 659 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 84/316 (26%), Positives = 133/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V G I+ G YW +P Sbjct: 38 LFHDKTRCFVYGMQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 97 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E ++ +I LI I EG+P + Sbjct: 98 VYQEVEKAMSKHPDVDTVVNFASSRSVYSSTMELMQYPQIKLIAIIAEGVPERRAREIMV 157 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 158 AAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 217 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + AD + ++++GE+GG E + Sbjct: 218 NIISQNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPKCKILLLLGEVGGVEEYRVIDAV 277 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 D KP+V + G A + GHAGA + A K M+E+GI + Sbjct: 278 HD---GTITKPVVAWAIGTCASLFKTEVQFGHAGASANSELETAVMKNKYMRESGIHVPD 334 Query: 285 SPARIGRSLVELLGSL 300 + + R L ++ L Sbjct: 335 TFEELPRVLADVYKKL 350 >gi|302678201|ref|XP_003028783.1| hypothetical protein SCHCODRAFT_78811 [Schizophyllum commune H4-8] gi|300102472|gb|EFI93880.1| hypothetical protein SCHCODRAFT_78811 [Schizophyllum commune H4-8] Length = 1170 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 80/316 (25%), Positives = 132/316 (41%), Gaps = 23/316 (7%) Query: 5 VDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPV 58 D+ T+ V GL + G + + V I+P G YW +PV Sbjct: 553 FDEKTRSFVYGLQPRAIQGMLDFDYSCGRDTPSVAAMIYPFGGHHIQKFYWGTKETLLPV 612 Query: 59 FTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIEAE--IPLIVCITEGIPVLDMVRVKA 115 +T+V EA ++ + V + + +E + + I I EG+P + Sbjct: 613 YTSVEEAVKKHPDVDVVVNFASSRSVYSSTLECFKYADTLKAIALIAEGVPERHAREILH 672 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + +IGP G + P +IG I+ ++R GSVG +S+SG ++ E Sbjct: 673 LARQKGVLIIGPATVGGIKPGCFRIGNSGGMMDNIIASKLYRPGSVGYVSKSGGMSNELN 732 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S G + IGGD G+ FID L + DE + +V++GE+GG E + + Sbjct: 733 NMLSLFTNGTYEGIAIGGDRYPGSTFIDHLMRYEKDENCKMLVLLGEVGGVEEYRVVEAV 792 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K + KPIV + G A GHAG++ + A+ K M+EAG + Sbjct: 793 K---QGKITKPIVAWAIGTCAKMFTTEVQFGHAGSMANSELETADTKNRIMREAGFLVPD 849 Query: 285 SPARIGRSLVELLGSL 300 + + + L +L Sbjct: 850 TFEELPQLLKSTYETL 865 >gi|170029202|ref|XP_001842482.1| ATP-citrate synthase [Culex quinquefasciatus] gi|167881585|gb|EDS44968.1| ATP-citrate synthase [Culex quinquefasciatus] Length = 1096 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 84/316 (26%), Positives = 138/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 + K TK LV G+ + + + VV ++P K YW V +P Sbjct: 488 MFSKGTKALVWGMQTRAVQSMLDFDFICRRDEPSVVAMVYPFTGYHKQKFYWGHKEVLIP 547 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V++ +++A + A+ V + A D+ +E ++ +I I I EGIP ++ Sbjct: 548 VYSKMSDAINKHKEADVLVNFASLRSAYDSSVEVLDYPQIRTIAIIAEGIPENLTRKLNV 607 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 608 AARSKNVSIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELN 667 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S G V IGGD GT F+D + + AD + +V++GE+GG E E + L Sbjct: 668 NIISLTTDGVFEGVAIGGDRYPGTTFMDHILRYQADPDAKMLVLLGEVGGVEEYEVCEAL 727 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 +D KP++ + G A GHAG+ + + A K ++ AG + Sbjct: 728 QDGRI---TKPLIAWCIGTCAGMFTSEVQFGHAGSCANSDRETATAKNKSLAAAGAHVPD 784 Query: 285 SPARIGRSLVELLGSL 300 S +G + + G L Sbjct: 785 SFDTLGDLIGSVYGDL 800 >gi|298508700|pdb|3MWD|B Chain B, Truncated Human Atp-Citrate Lyase With Citrate Bound Length = 334 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 137/318 (43%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G + G + + V ++P K YW + Sbjct: 4 TTLFSRHTKAIVWGXQTRAVQGXLDFDYVCSRDEPSVAAXVYPFTGDHKQKFYWGHKEIL 63 Query: 56 VPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF A+A ++ + + + A D+ E+ A+I I I EGIP ++ Sbjct: 64 IPVFKNXADAXRKHPEVDVLINFASLRSAYDSTXETXNYAQIRTIAIIAEGIPEALTRKL 123 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG + E Sbjct: 124 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGXLDNILASKLYRPGSVAYVSRSGGXSNE 183 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G V IGGD G+ F D + + + IV++GEIGG+ E + + Sbjct: 184 LNNIISRTTDGVYEGVAIGGDRYPGSTFXDHVLRYQDTPGVKXIVVLGEIGGTEEYKICR 243 Query: 226 FLKDEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KPIV + G A GHAGA + A K A+KEAG+ + Sbjct: 244 GIKEGR---LTKPIVCWCIGTCATXFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV 300 Query: 283 APSPARIGRSLVELLGSL 300 S +G + + L Sbjct: 301 PRSFDELGEIIQSVYEDL 318 >gi|295664925|ref|XP_002793014.1| ATP-citrate synthase subunit 1 [Paracoccidioides brasiliensis Pb01] gi|226278535|gb|EEH34101.1| ATP-citrate synthase subunit 1 [Paracoccidioides brasiliensis Pb01] Length = 659 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V G I+ G YW +P Sbjct: 38 LFHDKTRCFVYGMQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 97 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E ++ +I I I EG+P + Sbjct: 98 VYQEVEKAMTKHPDVDTIVNFASSRSVYSSTMELMQYPQIKSIAIIAEGVPERRAREIMV 157 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 158 AAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 217 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + AD + ++++GE+GG E + Sbjct: 218 NIISQNTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPKCKILLLLGEVGGVEEYRVIDAV 277 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 +D KP+V + G A + GHAGA + A K M+E+GI + Sbjct: 278 RD---GTITKPVVAWAIGTCASLFKTEVQFGHAGASANSELETAVMKNKYMRESGIHVPD 334 Query: 285 SPARIGRSLVELLGSL 300 + + R L ++ L Sbjct: 335 TFEELPRVLADVYKKL 350 >gi|237874159|ref|NP_001153852.1| ATP citrate lyase [Acyrthosiphon pisum] Length = 1092 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 84/316 (26%), Positives = 138/316 (43%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L NT+ +V G+ + + + V ++P G YW V +P Sbjct: 484 LFGSNTRAIVWGMQTRAVQSMLDFDFVCRRHEPSVACLVYPFTGDHKLKFYWGHKEVLIP 543 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ + +A + A+ V + A D+ IE++ +I I I EGIP ++ Sbjct: 544 VYKRMEDAMLKHQNADVLVNFASLRSAYDSTIETLNYPQIRTIAIIAEGIPENMTRKLIL 603 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + +IGP G L P KIG I+ ++R GSV +SRSG ++ Sbjct: 604 LANEKKVTVIGPATVGGLKPGGFKIGNTGGMMDNILHSKLYRAGSVAYVSRSGGMSNVLN 663 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD GT F+D + + AD + IV++GE+GG+ E E + L Sbjct: 664 NIISRTTDGVYEGVAIGGDRYPGTTFMDHIMRYQADPEIKMIVLLGEVGGTEEYEVCEAL 723 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 ++ KP+V + G A GHAG+ + + A K +++EAG + Sbjct: 724 ---TQKKITKPLVAWCIGTCASMFTSEVQFGHAGSCANSDQETATTKNASLREAGAFVPT 780 Query: 285 SPARIGRSLVELLGSL 300 S +G + ++ L Sbjct: 781 SFDFLGDIIHDVYKKL 796 >gi|70607033|ref|YP_255903.1| succinyl-CoA ligase, alfa chain [Sulfolobus acidocaldarius DSM 639] gi|68567681|gb|AAY80610.1| succinyl-CoA ligase, alfa chain [Sulfolobus acidocaldarius DSM 639] Length = 256 Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 122/265 (46%), Positives = 171/265 (64%), Gaps = 9/265 (3%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 +L T++V G+ P KG T NVPV+ TVA+A + +AS+I+VP A DA+ Sbjct: 1 MLKYGTKIVAGVTPGKGGTKVN----NVPVYDTVADAVKEHEIDASIIFVPAKFATDAVY 56 Query: 89 ESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF 148 E+I+ I LIV ITE IPVLDM+R+ + +R+IGPNCPG++ PD +GI+P F Sbjct: 57 EAIDNGIKLIVVITEHIPVLDMLRISKYAKLKGTRIIGPNCPGLIVPDEALLGILPPRPF 116 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 RKG +GI+SRSGTLTYE + + +GQST +GIGGDP+ GT +V+++F D TE Sbjct: 117 RKGKIGIVSRSGTLTYEISE--TIKHIGQSTVIGIGGDPIIGTTMDEVVQMFDQDPETEE 174 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 I+++GEIGG+ EE A+ + + KK ++ ++AG TAP + MGHAGAV+ G G Sbjct: 175 IIVIGEIGGTMEERVAKL---KKEGKIKKKMIAYIAGMTAPREKRMGHAGAVVYMGMGTF 231 Query: 269 EDKINAMKEAGICIAPSPARIGRSL 293 + KINA K AGI +A +P I L Sbjct: 232 DSKINAFKNAGIPVAKTPYEILELL 256 >gi|312066071|ref|XP_003136095.1| ATP-citrate synthase [Loa loa] gi|307768733|gb|EFO27967.1| ATP-citrate synthase [Loa loa] Length = 1113 Score = 219 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 85/324 (26%), Positives = 139/324 (42%), Gaps = 30/324 (9%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + +TK +V G K G + Q VV +P K Y+ + VP Sbjct: 496 LFENHTKAIVWGQQMKAIQGMLDFDFVCGRSQPSVVASTYPFIGDHKQKYYFGHKEILVP 555 Query: 58 VFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVK- 114 V+ ++ +A + + + + + E+++ ++I +I I EGIP + K Sbjct: 556 VYKSMKDAFIKHHDVSVFITFASLRSVYATVREALDFSQIRVIAIIAEGIPENQTRQDKL 615 Query: 115 -------ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRS 159 + LIGP G + P KIG I+ ++R GSV +SRS Sbjct: 616 VLIYRAFQLANEKCVTLIGPATVGGIKPGCFKIGNTGGMIDNILSLKLYRPGSVAYVSRS 675 Query: 160 GTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSA 219 G ++ E SQ G + IGGD G+ F+D L + D+ + +VM+GE+GG Sbjct: 676 GGMSNELNNIISQNADGVYEGIAIGGDRYPGSTFVDHLLRYEMDDRVKMMVMLGELGGEE 735 Query: 220 EEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMK 276 E + + LK++ KP++ + G A GHAGA + A K A+K Sbjct: 736 EYKVVEALKEKR---LTKPLIAWCIGTCANYVTFEIQFGHAGASANAQAETATAKNLALK 792 Query: 277 EAGICIAPSPARIGRSLVELLGSL 300 EAG + S +G + ++ L Sbjct: 793 EAGAYVPNSFNDLGDEIAKIYKDL 816 >gi|189189554|ref|XP_001931116.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) [Pyrenophora tritici-repentis Pt-1C-BFP] gi|330938223|ref|XP_003305706.1| hypothetical protein PTT_18621 [Pyrenophora teres f. teres 0-1] gi|187972722|gb|EDU40221.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) [Pyrenophora tritici-repentis Pt-1C-BFP] gi|311317132|gb|EFQ86173.1| hypothetical protein PTT_18621 [Pyrenophora teres f. teres 0-1] Length = 658 Score = 219 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 82/316 (25%), Positives = 130/316 (41%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V GL + G + V G I+ G YW +P Sbjct: 37 LFHPKTRCFVYGLQPRAVQGMLDFDFICKRKTPSVAGIIYTFGGQFVSKMYWGTSETLLP 96 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ TV +A + + V + + +E +E +I I I EG+P + Sbjct: 97 VYQTVEKAVGKHNDVDTVVNFASSRSVYQSTMELMEFPQIKCIAIIAEGVPERRAREILH 156 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P + KIG I+ ++R GS+ +S+SG ++ E Sbjct: 157 VAQKKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRPGSISYVSKSGGMSNELN 216 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + G V IGGD GT FID + + +D + IV++GE+GG E + + Sbjct: 217 NIIANTTDGVLEGVAIGGDRYPGTTFIDHVLRYQSDPDCKIIVLLGEVGGVEEYRVIEAV 276 Query: 228 KDEAKRGRKKPIVGFVAGKTAPP---GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K KPIV + G A GHAG+ + A K M+EAGI + Sbjct: 277 K---SGQVTKPIVAWAIGTVAGMLKTEVQFGHAGSFANSQLETAATKNKTMREAGIYVPE 333 Query: 285 SPARIGRSLVELLGSL 300 + + +L ++ L Sbjct: 334 TFEEMPETLAQVYQKL 349 >gi|297192593|ref|ZP_06909991.1| succinyl-CoA synthetase subunit alpha [Streptomyces pristinaespiralis ATCC 25486] gi|297151418|gb|EFH31147.1| succinyl-CoA synthetase subunit alpha [Streptomyces pristinaespiralis ATCC 25486] Length = 217 Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 107/220 (48%), Positives = 149/220 (67%), Gaps = 5/220 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++K++KV+VQG+TG G HT+ +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLNKDSKVIVQGMTGATGMKHTK-LMLGDGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VAEA E+T A+ SV++VPP+ A A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 SVAEAMEKTGADVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAYAKSK 119 Query: 121 S--SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPG++TP GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GNKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGS 218 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGD 217 >gi|302915627|ref|XP_003051624.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256732563|gb|EEU45911.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 653 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 84/316 (26%), Positives = 131/316 (41%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V GL + G + + V G I+ G YW +P Sbjct: 33 LFTGKTRCFVYGLQPRAVQGMLDFDFICKRAKPSVAGIIYTFGGQFVSKMYWGTSETLLP 92 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E +E +I I I EG+P + Sbjct: 93 VYQQVEKAVSKHPDVDVVVNFASSRSVYSSTMELMEFPQIKTIAIIAEGVPERRAREIAH 152 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P S KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 153 VAKKKGVTIIGPATVGGIKPGSFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 212 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + G + IGGD GT FID L + AD + +V++GE+GG E + + Sbjct: 213 NIIAGNTDGVYEGIAIGGDRYPGTTFIDHLLRYQADPECKILVLLGEVGGVEEY---KVI 269 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 + KPIV + G A + GHAG+ + A K M+EAG + Sbjct: 270 DAVKQGIITKPIVAWAIGTCASMFKTEVQFGHAGSFANSQLETAAMKNEKMREAGFYVPN 329 Query: 285 SPARIGRSLVELLGSL 300 + + L E+ L Sbjct: 330 TFEDLPNVLKEVYDGL 345 >gi|67523961|ref|XP_660040.1| ACL1_NEUCR Probable ATP-citrate synthase subunit 1 (ATP-citrate (pro-S-)-lyase 1) (Citrate cleavage enzyme subunit 1) [Aspergillus nidulans FGSC A4] gi|40744986|gb|EAA64142.1| ACL1_NEUCR Probable ATP-citrate synthase subunit 1 (ATP-citrate (pro-S-)-lyase 1) (Citrate cleavage enzyme subunit 1) [Aspergillus nidulans FGSC A4] gi|259487849|tpe|CBF86850.1| TPA: ATP citrate lyase, subunit 1, putative (AFU_orthologue; AFUA_6G10650) [Aspergillus nidulans FGSC A4] Length = 655 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 83/315 (26%), Positives = 131/315 (41%), Gaps = 22/315 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V G I+ G YW +P Sbjct: 36 LFHNKTRCFVYGMQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 95 Query: 58 VF-TTVAEAKERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ T + + V + + +E ++ +I I I EG+P + Sbjct: 96 VYQDTAKAMAKHPDVDTVVNFASSRSVYSSTMELMQYPQIKCIAIIAEGVPERRAREILV 155 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 156 TAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 215 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G V IGGD GT FID L + A+ + +V++GE+GG E + + Sbjct: 216 NIISQTTDGVYEGVAIGGDRYPGTTFIDHLLRYQAEPECKILVLLGEVGGVEEYRVIEAV 275 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KPIV + G A + GHAGA + A K AM+EAGI + Sbjct: 276 KNGVI---TKPIVAWAIGTCASMFKTEVQFGHAGASANSDLETAVAKNKAMREAGIYVPD 332 Query: 285 SPARIGRSLVELLGS 299 + + L ++ Sbjct: 333 TFEDMPAVLKKVYEE 347 >gi|320586931|gb|EFW99594.1| ATP-citrate synthase subunit 1 [Grosmannia clavigera kw1407] Length = 663 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L + T+ LV GL + G + V G ++ G YW +P Sbjct: 42 LFNNKTRCLVYGLQPRAVQGMLDFDFICKRPTPSVAGIVYTFGGQFVSKMYWGTSETLLP 101 Query: 58 VFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V++A E+ + V + + +E +E ++I I I EG+P + Sbjct: 102 VYQEVSKAVEKHPDVDVVVNFASSRSVYSSTLELMEYSQIKTIAIIAEGVPERRAREIAH 161 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 K +IGP G + P KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 162 IANKKGITIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 221 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 +Q G V IGGD GT FID + + AD + +V++GE+GG E + + Sbjct: 222 NIIAQNTDGVYEGVAIGGDRYPGTTFIDHMLRYQADPDCKILVLLGEVGGVEEY---KVI 278 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 + KPIV + G A + GHAG+ + A K M++AG + Sbjct: 279 DAVKQGIITKPIVAWAIGTCASMFKTEVQFGHAGSFANSQLETAAMKNKQMRDAGFFVPT 338 Query: 285 SPARIGRSLVELLGSL 300 + + L + L Sbjct: 339 TFEDMPTVLKSVYEKL 354 >gi|322709756|gb|EFZ01331.1| ATP-citrate synthase subunit 1 [Metarhizium anisopliae ARSEF 23] Length = 661 Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats. Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L + T+ V GL + G + V G I+ G YW +P Sbjct: 40 LFNDKTRCFVYGLQPRAVQGMLDFDFICKRKTPSVAGIIYTFGGQFVSKMYWGTSETLLP 99 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +A + + V + + +E ++ +I I I EG+P + Sbjct: 100 VYQQPDKAMAKHPDVDVVVNFASSRSVYSSTMELMQYPQIKTIAIIAEGVPERRAREIAH 159 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P S KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 160 AAKKKGVTIIGPATVGGIKPGSFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 219 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD GT FID + + AD + +V++GE+GG E + + Sbjct: 220 NIISQNTDGVYEGIAIGGDRYPGTTFIDHMLRYQADPDCKILVLLGEVGGVEEY---KVI 276 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 + + KPIV + G A + GHAG+ + + A K M+EAG + Sbjct: 277 EAVEQGIITKPIVAWAIGTCASMFKTEVQFGHAGSFANSQRETAATKNKTMREAGFHVPN 336 Query: 285 SPARIGRSLVELLGSL 300 + + L ++ L Sbjct: 337 TFEEMPAVLKQVYDKL 352 >gi|296814082|ref|XP_002847378.1| ATP-citrate synthase subunit 1 [Arthroderma otae CBS 113480] gi|238840403|gb|EEQ30065.1| ATP-citrate synthase subunit 1 [Arthroderma otae CBS 113480] Length = 653 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 79/316 (25%), Positives = 131/316 (41%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V I+ G YW +P Sbjct: 33 LFHNKTRCFVYGMQPRAVQGMLDFDFICKRSTPSVAAIIYTFGGQFVSKMYWGTSETLLP 92 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +A + + V + + +E +E +I I I EG+P + Sbjct: 93 VYQDTDKAMAKHADVDTVVNFASSRSVYSSTMELMEFPQIKTIAIIAEGVPERRAREIMV 152 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 R ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 153 RAKEKGVTIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 212 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 Q G V IGGD GT F+D L + A+ + ++++GE+GG E + + Sbjct: 213 NIVCQTTDGVCEGVAIGGDRYPGTTFLDHLLRYQANPECKILLLLGEVGGVEEYRVIEAV 272 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KP+V + G A + GHAGA + A K +M+ AGI + Sbjct: 273 KN---GTITKPVVAWAIGTCASMFKTEVQFGHAGASANSDLETAVTKNKSMRAAGIHVPD 329 Query: 285 SPARIGRSLVELLGSL 300 + + L ++ L Sbjct: 330 TFEDLPDVLADVYQKL 345 >gi|170102777|ref|XP_001882604.1| predicted protein [Laccaria bicolor S238N-H82] gi|164642501|gb|EDR06757.1| predicted protein [Laccaria bicolor S238N-H82] Length = 1157 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 81/315 (25%), Positives = 128/315 (40%), Gaps = 22/315 (6%) Query: 5 VDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPV 58 D NT+ V GL + G + + V I+P G YW +PV Sbjct: 542 FDANTRSFVYGLQPRAIQGMLDFDYSCGRQTPSVAAMIYPFGGHHIQKFYWGTKETLLPV 601 Query: 59 FTTV-AEAKERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMVRVKAR 116 +T + + V + + +E +E E I I I EG+P + + Sbjct: 602 YTGFTEAIAKHPDVDVVVNFASSRSVYSSTLECLEFEQIKAIALIAEGVPERHAREILWK 661 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 + ++GP G + P +IG I+ ++R GSVG +S+SG ++ E Sbjct: 662 AKGRGVLIVGPATVGGIKPGCFRIGNSGGMMDNIIASKLYRAGSVGYVSKSGGMSNELNN 721 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 S G + IGGD G+ FID L + D + +V++GE+GG E +K Sbjct: 722 ILSLVTNGTYEGIAIGGDRYPGSTFIDHLLRYEQDPDCKMLVLLGEVGGIEEYRVIDAVK 781 Query: 229 DEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 KKPIV + G A GHAG++ + A+ K AM+ AG + + Sbjct: 782 AGII---KKPIVAWAIGTCAKMFTTEVQFGHAGSMANSELETADAKNRAMRAAGFVVPET 838 Query: 286 PARIGRSLVELLGSL 300 ++ L E L Sbjct: 839 FEQLPTVLKETYEGL 853 >gi|302558886|ref|ZP_07311228.1| succinyl-CoA synthetase, alpha subunit [Streptomyces griseoflavus Tu4000] gi|302476504|gb|EFL39597.1| succinyl-CoA synthetase, alpha subunit [Streptomyces griseoflavus Tu4000] Length = 219 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 109/222 (49%), Positives = 151/222 (68%), Gaps = 5/222 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++K++KV+VQG+TG G HT+ +L T +VGG++P+K T +PVF Sbjct: 1 MAIFLNKDSKVIVQGMTGATGMKHTK-LMLADGTNIVGGVNPRKAGTSVDIDGNEIPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--E 118 TVAEA E+T AN SV++VPP+ A A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 TVAEAMEKTGANVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFYAYAVEK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPG+++P GI+PG I + G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GDKTRIIGPNCPGLISPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 +AVGIGGDPV GT ID L F AD T+ IVM+GEIGG AE Sbjct: 178 SAVGIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAE 219 >gi|309361866|emb|CAP29152.2| hypothetical protein CBG_09435 [Caenorhabditis briggsae AF16] Length = 1111 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 83/316 (26%), Positives = 134/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + NTK ++ G K G + VV +P K Y+ + +P Sbjct: 494 LFENNTKAIIWGQQHKAIQGMLDFDFVCGRHSPSVVASTYPFTGDNKQKYYFGQKEILIP 553 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A V + + ++E+++ ++I +I I EG+P ++ Sbjct: 554 AYKSMAKAFASHPDATVMVTFASMRSVFETVLEALQFSQIKVIAIIAEGVPENQTRKLLK 613 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 E LIGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 614 VAEDKGVTLIGPATVGGIKPGCFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 673 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD G+ + D + + D+ + IV++GE+GG E + L Sbjct: 674 NIISQNTNGVYEGIAIGGDRYPGSTYTDHVLRYQHDDRVKMIVLLGEVGGVEEYRIVELL 733 Query: 228 KDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K + KP+V + G A GHAGA G A K A++ AG + Sbjct: 734 K---TKQITKPLVAWCIGTCADHITSEVQFGHAGASAHGEGETAACKNTALRSAGALVPS 790 Query: 285 SPARIGRSLVELLGSL 300 S +G + E L Sbjct: 791 SFDDLGNKIRETYEDL 806 >gi|239906516|ref|YP_002953257.1| succinyl-CoA synthetase beta chain/succinyl-CoA synthetase alpha chain [Desulfovibrio magneticus RS-1] gi|239796382|dbj|BAH75371.1| succinyl-CoA synthetase beta chain/succinyl-CoA synthetase alpha chain [Desulfovibrio magneticus RS-1] Length = 705 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 124/291 (42%), Positives = 173/291 (59%), Gaps = 10/291 (3%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 ++ VLVQGLTG+AG H + Y T VV G+ P +G + G +PV+ TVAEA Sbjct: 421 DSGVLVQGLTGRAGRAHARRMRAY-GTPVVAGVTPFRGGSEVDG----LPVYDTVAEAMG 475 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGP 127 R SVI+VP +GA DAI E+ A + IVCIT+GIP DM+ V+A L + L+GP Sbjct: 476 RHDIALSVIFVPAAGAADAIEEAAAAGVARIVCITDGIPQRDMLSVRAALAGRQTTLVGP 535 Query: 128 NCPGILTPDSCK-IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 N PG++ P GIMP F G V I SRSGTLTYE + + G+GQ+ A G+GGD Sbjct: 536 NTPGLILPGQWFSAGIMPTEPFTPGPVAIFSRSGTLTYEVASRLTAAGIGQALAAGMGGD 595 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P G F+++ E+ D +++++GE+GG+AEEE A+++ A KP+ FVAG Sbjct: 596 PFGGAGFVELCEMVRDDARVRAVMVIGEVGGTAEEELAEYV---ASTKYPKPVAAFVAGV 652 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 +APPGRT+GHAGA++ GG K+ + AGI + + + E L Sbjct: 653 SAPPGRTLGHAGALLER-PGGVAAKLACLARAGIPVCEELGEVAGVMAEAL 702 >gi|156060481|ref|XP_001596163.1| hypothetical protein SS1G_02379 [Sclerotinia sclerotiorum 1980] gi|154699787|gb|EDN99525.1| hypothetical protein SS1G_02379 [Sclerotinia sclerotiorum 1980 UF-70] Length = 655 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 85/316 (26%), Positives = 129/316 (40%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V GL + G + V G I+ G YW +P Sbjct: 34 LFHDKTRCFVYGLQPRAVQGMLDFDFICKRKTPSVAGIIYTFGGQFVSKMYWGTSETLLP 93 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E +E +I I I EG+P + Sbjct: 94 VYQDVGKAMAKHEDVDTVVNFASSRSVYQSTMELLEYPQIKSIAIIAEGVPERRAREILH 153 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 K +IGP G + P S KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 154 AAAKKGVTIIGPATVGGIKPGSFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 213 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + G V IGGD T FID L + AD + +V++GE+GG E + + Sbjct: 214 NIIANTTDGVYEGVAIGGDRYPSTTFIDHLLRYQADPECKILVLLGEVGGVEEYRVIEAV 273 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KPIV + G A + GHAG+ + A K +MKEAG + Sbjct: 274 KN---GTITKPIVAWAIGTCASMFKTEVQFGHAGSFANSQLETAATKNKSMKEAGFHVPD 330 Query: 285 SPARIGRSLVELLGSL 300 + + L + L Sbjct: 331 TFEDMPAVLASVYEKL 346 >gi|268557936|ref|XP_002636958.1| Hypothetical protein CBG09435 [Caenorhabditis briggsae] Length = 1099 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 83/316 (26%), Positives = 134/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + NTK ++ G K G + VV +P K Y+ + +P Sbjct: 488 LFENNTKAIIWGQQHKAIQGMLDFDFVCGRHSPSVVASTYPFTGDNKQKYYFGQKEILIP 547 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A V + + ++E+++ ++I +I I EG+P ++ Sbjct: 548 AYKSMAKAFASHPDATVMVTFASMRSVFETVLEALQFSQIKVIAIIAEGVPENQTRKLLK 607 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 E LIGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 608 VAEDKGVTLIGPATVGGIKPGCFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 667 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD G+ + D + + D+ + IV++GE+GG E + L Sbjct: 668 NIISQNTNGVYEGIAIGGDRYPGSTYTDHVLRYQHDDRVKMIVLLGEVGGVEEYRIVELL 727 Query: 228 KDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K + KP+V + G A GHAGA G A K A++ AG + Sbjct: 728 K---TKQITKPLVAWCIGTCADHITSEVQFGHAGASAHGEGETAACKNTALRSAGALVPS 784 Query: 285 SPARIGRSLVELLGSL 300 S +G + E L Sbjct: 785 SFDDLGNKIRETYEDL 800 >gi|297521616|ref|ZP_06940002.1| succinyl-CoA synthetase subunit alpha [Escherichia coli OP50] Length = 180 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 113/185 (61%), Positives = 136/185 (73%), Gaps = 5/185 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+DKNTKV+ QG TG GTFH+EQAI Y T++VGG+ P KG T G +PVF Sbjct: 1 MSILIDKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ Sbjct: 56 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R+IGPNCPG++TP CKIGI PG I + G VGI+SRSGTLTYEAV QT+ G GQST Sbjct: 116 GVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTC 175 Query: 181 VGIGG 185 VGIGG Sbjct: 176 VGIGG 180 >gi|320593459|gb|EFX05868.1| succinyl-synthetase subunit [Grosmannia clavigera kw1407] Length = 707 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 120/301 (39%), Positives = 184/301 (61%), Gaps = 9/301 (2%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + + ++T+V+ QG TG+ T + +++ + T VVGG+ P + +G ++ +P+ +V Sbjct: 36 LRIGRHTRVIFQGFTGRQATANARESLAW-GTNVVGGVTPGR-----SGEHLGLPLLPSV 89 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSS 121 A A +A+ IYVP + A AI E+I AE+PL+V + E IP+ M+R+ A L +++ Sbjct: 90 AAAVTALRPHATGIYVPAALAPAAIEEAIAAEVPLVVAVAEHIPLHAMLRISAVLRTQTA 149 Query: 122 SRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL+G N PGI+ C+IG P S F G VGI +RSGTL+YEAV T++ GLGQS Sbjct: 150 SRLVGANSPGIIAAVGRCRIGFQPLSCFEAGRVGIAARSGTLSYEAVASTTRAGLGQSLC 209 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKPI 239 +G+GGD V GT+ + L + D T++I ++GEIGG++E EAA ++++ + KPI Sbjct: 210 IGVGGDVVPGTDLREALTILATDPDTDAIALIGEIGGTSELEAAAWIREYHIREPNPKPI 269 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V VAG PGR MGHAGA G+ A +KI A++ AG I P + G ++ L Sbjct: 270 VALVAGTNCVPGRMMGHAGAFSLPGEPDAHEKIRALQIAGATIVDHPEKFGEAIKARLQE 329 Query: 300 L 300 + Sbjct: 330 I 330 >gi|242819170|ref|XP_002487262.1| ATP citrate lyase, subunit 1, putative [Talaromyces stipitatus ATCC 10500] gi|218713727|gb|EED13151.1| ATP citrate lyase, subunit 1, putative [Talaromyces stipitatus ATCC 10500] Length = 656 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 82/316 (25%), Positives = 132/316 (41%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V G I+ G YW +P Sbjct: 35 LFHPKTRCFVYGMQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 94 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E +E ++ I I EG+P + Sbjct: 95 VYQDVEKAFAKHSDVDTVVNFASSRSVYSSTMELMEIPQVRTIAIIAEGVPERRAREIMV 154 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 155 VAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 214 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 Q G V IGGD GT FID L + AD + ++++GE+GG E + + Sbjct: 215 NIICQNADGVHEGVAIGGDRYPGTTFIDHLLRYQADPECKILLLLGEVGGVEEYRVIEAV 274 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KPIV + G A + GHAGA + A +K M+ AG + Sbjct: 275 KN---GTITKPIVAWAIGTCASMFKTEVQFGHAGASANSQLETAVEKNKHMRAAGFYVPD 331 Query: 285 SPARIGRSLVELLGSL 300 + + + L +L L Sbjct: 332 TFEELPQVLNDLYKKL 347 >gi|17557344|ref|NP_506267.1| hypothetical protein B0365.1 [Caenorhabditis elegans] gi|3873757|emb|CAB02690.1| C. elegans protein B0365.1, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 1099 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + +TK ++ G K G + VV +P K Y+ + +P Sbjct: 488 LFENDTKAIIWGQQHKAIQGMLDFDFVCRRHSPSVVASTYPFTGDNKQKYYFGQKEILIP 547 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A V + + ++E+++ +I +I I EG+P ++ Sbjct: 548 AYKSMAKAFASHPDATVMVTFASMRSVFETVLEALQFTQIKVIAIIAEGVPENQTRKLLK 607 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 E LIGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 608 IAEDKGVTLIGPATVGGIKPGCFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 667 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD G+ + D + + D+ + IV++GE+GG E + L Sbjct: 668 NIISQNTNGVYEGIAIGGDRYPGSTYTDHVMRYQHDDRVKMIVLLGEVGGIEEYRIVELL 727 Query: 228 KDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ + KP++ + G A GHAGA +G A K A++ AG + Sbjct: 728 KE---KKITKPLIAWCIGTCADHITSEVQFGHAGASANGQGETAACKNTALRTAGALVPD 784 Query: 285 SPARIGRSLVELLGSL 300 S +G + + L Sbjct: 785 SFDDLGNKIRQTYEEL 800 >gi|328767640|gb|EGF77689.1| hypothetical protein BATDEDRAFT_35901 [Batrachochytrium dendrobatidis JAM81] Length = 1206 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 82/317 (25%), Positives = 143/317 (45%), Gaps = 22/317 (6%) Query: 3 ILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNV 56 I K ++ + G+ + G F + Q V I+P G YW + Sbjct: 560 IPFTKTSRAFIYGMQPRAVQGMFDFDFMCKREQPSVACMIYPFGGHHVQKFYWGTKETLL 619 Query: 57 PVFTTVAEAKERTAANASVI-YVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVK 114 PV+T++AEA R + VI + ++ E ++ +I I I EG+P ++ Sbjct: 620 PVYTSIAEACLRFPDVSIVINFASFRSVYESTRELLQYPKIKTIAIIAEGVPERRARQIL 679 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 ++ +IGP G + P KIG I+ ++R GSV +S+SG ++ E Sbjct: 680 WEAKEKGVLIIGPATVGGIKPGCFKIGNTGGMMDNIVSSKLYRPGSVAYVSKSGGMSNEL 739 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 S+ G V IGGD G+ FID + + AD + +V++GE+GG E A+ Sbjct: 740 NNIISRATDGVYEGVAIGGDRYPGSTFIDHMLRYEADSNAKILVLLGEVGGVEEYAIAEA 799 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 +K KKP+V + G A GHAG+ + A+ K A+ ++G+ + Sbjct: 800 VKAGHI---KKPVVAWCIGTCAKMFTTDVQFGHAGSFANSNMETADAKNKALADSGVIVP 856 Query: 284 PSPARIGRSLVELLGSL 300 P+ + ++L ++ ++ Sbjct: 857 PTFEDLPQTLAQVYKNM 873 >gi|289807796|ref|ZP_06538425.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 196 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 123/198 (62%), Positives = 149/198 (75%), Gaps = 5/198 (2%) Query: 21 GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPP 80 GTFH+EQAI Y TQ+VGG+ P KG T G +PVF TV EA E T A ASVIYVP Sbjct: 1 GTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFNTVREAVEATGATASVIYVPA 55 Query: 81 SGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKI 140 D+I+E+I+A I LI+ ITEGIP LDM+ VK +L+++ R+IGPNCPG++TP CKI Sbjct: 56 PFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKI 115 Query: 141 GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 GIMPG I + G VGI+SRSGTLTYEAV QT+ G GQST VGIGGDP+ G+ FID+L+LF Sbjct: 116 GIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILKLF 175 Query: 201 LADEATESIVMVGEIGGS 218 D TE+IVM+GEIGGS Sbjct: 176 QEDPQTEAIVMIGEIGGS 193 >gi|315053179|ref|XP_003175963.1| ATP-citrate synthase subunit 1 [Arthroderma gypseum CBS 118893] gi|311337809|gb|EFQ97011.1| ATP-citrate synthase subunit 1 [Arthroderma gypseum CBS 118893] Length = 650 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 80/316 (25%), Positives = 130/316 (41%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V I+ G YW +P Sbjct: 30 LFHNKTRCFVYGMQPRAVQGMLDFDFICKRSTPSVAAIIYTFGGQFVSKMYWGTSETLLP 89 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +A + + V + + +E +E +I I I EG+P + Sbjct: 90 VYQDTNKAMAKHADVDTVVNFASSRSVYSSTMELMECPQIKTIAIIAEGVPERRAREIMV 149 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 R ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 150 RAKEKGVTIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 209 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 Q G V IGGD GT F+D L + A+ + ++++GE+GG E + Sbjct: 210 NIVCQTTDGVCEGVAIGGDRYPGTTFLDHLLRYQANPECKILLLLGEVGGVEEYRVIDAV 269 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KP+V + G A + GHAGA + A K +M+EAGI + Sbjct: 270 KN---GTITKPVVAWAIGTCASMFKTEVQFGHAGASANSDLETAVTKNKSMREAGIHVPD 326 Query: 285 SPARIGRSLVELLGSL 300 + + L + L Sbjct: 327 TFEDLPDVLATVYQKL 342 >gi|326471618|gb|EGD95627.1| ATP-citrate synthase subunit 1 [Trichophyton tonsurans CBS 112818] gi|326484008|gb|EGE08018.1| ATP-citrate synthase subunit 1 [Trichophyton equinum CBS 127.97] Length = 650 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 79/316 (25%), Positives = 130/316 (41%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V I+ G YW +P Sbjct: 30 LFHNKTRCFVYGMQPRAVQGMLDFDFICKRSTPSVAAIIYTFGGQFVSKMYWGTSETLLP 89 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +A + + V + + +E +E +I I I EG+P + Sbjct: 90 VYQDTNKAMAKHADVDTVVNFASSRSVYSSTMELMEFPQIKTIAIIAEGVPERRAREIMV 149 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 R ++ +IGP G + P + KIG I+ ++RKGSV +S+SG ++ E Sbjct: 150 RAKEKGVTIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVAYVSKSGGMSNELN 209 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 Q G V IGGD GT F+D L + A+ + ++++GE+GG E + + Sbjct: 210 NIVCQTTDGVCEGVAIGGDRYPGTTFLDHLLRYQANPECKILLLLGEVGGVEEYRVIEAV 269 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KP+V + G A + GHAGA + A K +M+EAGI + Sbjct: 270 KN---GTITKPVVAWAIGTCASMFKTEVQFGHAGASANSDLETAVTKNKSMREAGIHVPD 326 Query: 285 SPARIGRSLVELLGSL 300 + + L + L Sbjct: 327 TFEDLPDVLAAVYQKL 342 >gi|312212766|emb|CBX92849.1| similar to ATP-citrate synthase subunit 1 [Leptosphaeria maculans] Length = 665 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 85/316 (26%), Positives = 131/316 (41%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V GL + G + Q V G I+ G YW +P Sbjct: 46 LFHPKTRCFVYGLQPRAVQGMLDFDFICKRKQPSVAGIIYTFGGQFVSKMYWGTSETLLP 105 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ TV +A + + V + + +E +E +I I I EG+P + Sbjct: 106 VYQTVEKAVAKHADVDTVVNFASSRSVFQSTMELMEFPQIKCIAIIAEGVPERRAREILH 165 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 +K +IGP G + P + KIG I+ ++R GSV +S+SG ++ E Sbjct: 166 VAQKKGVTIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRPGSVSYVSKSGGMSNELN 225 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + G V IGGD GT FID + + AD + IV++GE+GG E + + Sbjct: 226 NIIANTTDGVLEGVAIGGDRYPGTTFIDHVLRYQADPDCKCIVLLGEVGGVEEYRVIEAV 285 Query: 228 KDEAKRGRKKPIVGFVAGKTAPP---GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K KPIV + G A GHAG+ + A K M+EAGI + Sbjct: 286 K---SGQVTKPIVAWAIGTVAGMLKTEVQFGHAGSFANSQLETAATKNKTMREAGIYVPE 342 Query: 285 SPARIGRSLVELLGSL 300 + + +L ++ L Sbjct: 343 TFEDMPGTLAQVYQKL 358 >gi|46127041|ref|XP_388074.1| hypothetical protein FG07898.1 [Gibberella zeae PH-1] Length = 320 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 123/277 (44%), Positives = 179/277 (64%), Gaps = 7/277 (2%) Query: 26 EQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGD 85 Q + T+VVGG+ KG T ++ +P+F ++ +A E + S +++ S A D Sbjct: 14 AQDTIAYGTKVVGGVT--KGPKVDT--HLGLPLFGSMEKAAEELNPDVSAVFIRGSLAAD 69 Query: 86 AIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTPDSCKIGIMP 144 AIIE+I+ EIPLIV + E +PV DM+RV L +S SRL+GPNCPGI+ P+ C++GIMP Sbjct: 70 AIIEAIKVEIPLIVSVAEHVPVHDMLRVHEVLRTQSKSRLVGPNCPGIIAPEQCRVGIMP 129 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 + +G VGI+S+SGTL+YEAV TS+ GLGQS VG+GGD + GT +D L+LF + Sbjct: 130 YKQYTRGCVGIVSKSGTLSYEAVGATSRAGLGQSLVVGMGGDMIPGTSLVDALKLFFEHD 189 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK-KPIVGFVAGKTAPPGRTMGHAGAVISG 263 T+ ++++GEIGG AE EAA+ ++ + K KPI+ VAG+TAP R MGHAGA+ Sbjct: 190 ETKGMLVIGEIGGEAELEAAELIERYRRNTPKPKPIIAMVAGQTAPEHRIMGHAGAMRRD 249 Query: 264 G-KGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 A++K A++ AG + P P +G + +LL S Sbjct: 250 SVDPTAQEKAAALQNAGAVVVPHPGVMGNIMEKLLAS 286 >gi|325090016|gb|EGC43326.1| succinyl-CoA ligase alpha-chain [Ajellomyces capsulatus H88] Length = 648 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 127/286 (44%), Positives = 178/286 (62%), Gaps = 9/286 (3%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G T + ++++ + T+VVGG+ P G ++ +PVF +V A+E+ +A+ IY Sbjct: 20 GLQATANVKESLAW-GTKVVGGVKPG-----VEGEHLGLPVFPSVQVAQEKLKPDATAIY 73 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTP- 135 VP AI E+I AEIPLIV + E +PV DM+R+ A L+ +S SRL+G NCPGI++ Sbjct: 74 VPGPQTAQAIEEAIAAEIPLIVAVAEHVPVHDMLRIHAMLQTQSKSRLVGANCPGIISAI 133 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 C+IG P S F G +GI+++SGTL YE V T++ GLGQS +G+GGD V GT F+D Sbjct: 134 GRCRIGFQPLSCFAPGHIGIVAKSGTLGYETVAATTRAGLGQSLCIGVGGDVVAGTSFVD 193 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPIVGFVAGKTAPPGRTM 254 L LF DE T I++VGEIGGSAE AA+++ D +R KPI+ V G APPGR M Sbjct: 194 ALNLFEHDEETHGIIIVGEIGGSAEIAAAEWIFDYRRRTADPKPIMAVVGGIYAPPGRVM 253 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GHAGA G A+ KI A++ AG + P + G + LL ++ Sbjct: 254 GHAGAWAGLGDPDAQTKIRALQNAGAVMVDHPEKFGEGMRTLLTNV 299 >gi|240276118|gb|EER39630.1| succinyl-CoA ligase alpha-chain [Ajellomyces capsulatus H143] Length = 645 Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 127/286 (44%), Positives = 178/286 (62%), Gaps = 9/286 (3%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G T + ++++ + T+VVGG+ P G ++ +PVF +V A+E+ +A+ IY Sbjct: 20 GLQATANVKESLAW-GTKVVGGVKPG-----VEGEHLGLPVFPSVQVAQEKLKPDATAIY 73 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTP- 135 VP AI E+I AEIPLIV + E +PV DM+R+ A L+ +S SRL+G NCPGI++ Sbjct: 74 VPGPQTAQAIEEAIAAEIPLIVAVAEHVPVHDMLRIHAMLQTQSKSRLVGANCPGIISAI 133 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 C+IG P S F G +GI+++SGTL YE V T++ GLGQS +G+GGD V GT F+D Sbjct: 134 GRCRIGFQPLSCFAPGHIGIVAKSGTLGYETVAATTRAGLGQSLCIGVGGDVVAGTSFVD 193 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPIVGFVAGKTAPPGRTM 254 L LF DE T I++VGEIGGSAE AA+++ D +R KPI+ V G APPGR M Sbjct: 194 ALNLFEHDEETHGIIIVGEIGGSAEIAAAEWIFDYRRRTADPKPIMAVVGGIYAPPGRVM 253 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GHAGA G A+ KI A++ AG + P + G + LL ++ Sbjct: 254 GHAGAWAGLGDPDAQTKIRALQNAGAVMVDHPEKFGEGMRTLLTNV 299 >gi|225560012|gb|EEH08294.1| succinyl-CoA ligase alpha-chain [Ajellomyces capsulatus G186AR] Length = 648 Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 127/286 (44%), Positives = 178/286 (62%), Gaps = 9/286 (3%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G T + ++++ + T+VVGG+ P G ++ +PVF +V A+E+ +A+ IY Sbjct: 20 GLQATANVKESLAW-GTKVVGGVKPG-----VEGEHLGLPVFPSVQVAQEKLKPDATAIY 73 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTP- 135 VP AI E+I AEIPLIV + E +PV DM+R+ A L+ +S SRL+G NCPGI++ Sbjct: 74 VPGPQTAQAIEEAIAAEIPLIVAVAEHVPVHDMLRIHAMLQTQSKSRLVGANCPGIISAI 133 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 C+IG P S F G +GI+++SGTL YE V T++ GLGQS +G+GGD V GT F+D Sbjct: 134 GRCRIGFQPLSCFAPGHIGIVAKSGTLGYETVAATTRAGLGQSLCIGVGGDIVAGTSFVD 193 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPIVGFVAGKTAPPGRTM 254 L LF DE T I++VGEIGGSAE AA+++ D +R KPI+ V G APPGR M Sbjct: 194 ALNLFEHDEETHGIIIVGEIGGSAEIAAAEWIFDYRRRTADPKPIMAVVGGIYAPPGRVM 253 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GHAGA G A+ KI A++ AG + P + G + LL ++ Sbjct: 254 GHAGAWAGLGDPDAQTKIRALQNAGAVMVDHPEKFGEGMRTLLTNV 299 >gi|282895775|ref|ZP_06303862.1| CoA-binding protein [Raphidiopsis brookii D9] gi|281199275|gb|EFA74141.1| CoA-binding protein [Raphidiopsis brookii D9] Length = 295 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 102/297 (34%), Positives = 160/297 (53%), Gaps = 14/297 (4%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 ++KVL+QG + T H +Q Y T +V G+ P G N+PVF V E Sbjct: 6 DSKVLIQGFSELISTTHIDQMKSYYGTNLVAGVDPGHGGIMAH----NLPVFDLVEEVVS 61 Query: 68 RTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + ++I V P DA +E+I + I I+ I+ G+P LDMV + + E ++G Sbjct: 62 SFGTIDTTIISVHPYQVLDAALEAIASNISQIIIISAGVPPLDMVALLRKTENHEILIVG 121 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN PGI+ P +GI P + G+VGI+SRS TLTYE ++ ++ GLGQS +V IG D Sbjct: 122 PNSPGIIVPGKILLGIQPSEFYTPGNVGIVSRSSTLTYEVAWELTKSGLGQSISVSIGSD 181 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + G+ F L++ DE TE+IV+VG+ GG +EE AA+++ KP+V ++AG+ Sbjct: 182 AIVGSSFSQWLQILDEDENTEAIVLVGQPGGESEEVAAKYI----STAIDKPVVAYIAGR 237 Query: 247 TAPPGRTMGHAGAVISGGK-----GGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 APP ++ +G + K G K++ A I +A +I + L++ + Sbjct: 238 HAPPSKSWHQSGNFATVVKRDPDFGSVSSKLSTFSNAQIPVAEYTQQIPQLLIKAMK 294 >gi|225679646|gb|EEH17930.1| succinyl-CoA synthetase beta chain [Paracoccidioides brasiliensis Pb03] Length = 694 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 125/308 (40%), Positives = 190/308 (61%), Gaps = 15/308 (4%) Query: 2 SILVDKNTKVLVQGLT------GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN 55 ++ + +T+VL QG T GK T + ++++ + T+++GG+ P G ++ Sbjct: 47 NLKIGAHTRVLFQGFTAKIYVTGKQATANVKESLAW-GTKIIGGVKPG-----VEGEHLG 100 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +V A++ + +A+ IYVP AI E+IEAEIPLIV + E +P+ D+VRV A Sbjct: 101 LPVFPSVKVAQQISRPDATAIYVPGPQTAQAIEEAIEAEIPLIVAVAEHVPIHDIVRVHA 160 Query: 116 RLE-KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 L+ +S SRL+G NCPGI++ C+IG P F G +GI+++SGTL YE V TS+ Sbjct: 161 MLKTQSKSRLVGANCPGIISAIGKCRIGFQPLPCFSPGHIGIVAKSGTLGYETVASTSRA 220 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 GLGQS +G+GGD + GT+F+D L +F D+ T I++VGEIGG+AE AA+++ +R Sbjct: 221 GLGQSLCIGMGGDVLAGTDFVDALSIFEHDDDTHGIIIVGEIGGTAEIAAAEWIAHYRRR 280 Query: 234 -GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KPI+ + G AP GR MGHAGA + G+ A+ KI A++ AG + P G Sbjct: 281 SANPKPIMAVICGIHAPLGRVMGHAGAWVGPGEPDAQTKIKALQNAGAVMVHHPEDFGEG 340 Query: 293 LVELLGSL 300 + LL ++ Sbjct: 341 MKMLLSNM 348 >gi|327293008|ref|XP_003231201.1| ATP-citrate synthase subunit 1 [Trichophyton rubrum CBS 118892] gi|326466620|gb|EGD92073.1| ATP-citrate synthase subunit 1 [Trichophyton rubrum CBS 118892] Length = 650 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 79/316 (25%), Positives = 130/316 (41%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V I+ G YW +P Sbjct: 30 LFHNKTRCFVYGMQPRAVQGMLDFDFICKRSTPSVAAIIYTFGGQFVSKMYWGTSETLLP 89 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ +A + + V + + +E +E +I I I EG+P + Sbjct: 90 VYQDTNKAMAKHADVDTVVNFASSRSVYSSTMELMEFPQIKTIAIIAEGVPERRAREIMV 149 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 R ++ +IGP G + P + KIG I+ ++RKGSV +S+SG ++ E Sbjct: 150 RAKEKGVTIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVAYVSKSGGMSNELN 209 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 Q G V IGGD GT F+D L + A+ + ++++GE+GG E + + Sbjct: 210 NIVCQTTDGVCEGVAIGGDRYPGTTFLDHLLRYQANPECKILLLLGEVGGVEEYRVIEAV 269 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KP+V + G A + GHAGA + A K +M+EAGI + Sbjct: 270 KN---GTITKPVVAWAIGTCASMFKTEVQFGHAGASANSDLETAVTKNKSMREAGIHVPD 326 Query: 285 SPARIGRSLVELLGSL 300 + + L + L Sbjct: 327 TFEDLPDVLSAVYQKL 342 >gi|212530264|ref|XP_002145289.1| ATP citrate lyase, subunit 1, putative [Penicillium marneffei ATCC 18224] gi|210074687|gb|EEA28774.1| ATP citrate lyase, subunit 1, putative [Penicillium marneffei ATCC 18224] Length = 656 Score = 215 bits (547), Expect = 7e-54, Method: Composition-based stats. Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V G+ + G + V G I+ G YW +P Sbjct: 35 LFHPKTRCFVYGMQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 94 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E +E ++ I I EG+P + Sbjct: 95 VYQDVEKAFAKHSDVDTVVNFASSRSVYSSTMELMELPQVRTIAIIAEGVPERRAREIMV 154 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 155 VAKEKGITIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 214 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 Q G V IGGD GT FID L + AD + ++++GE+GG E + + Sbjct: 215 NIVCQNADGVHEGVAIGGDRYPGTTFIDHLLRYQADPDCKILLLLGEVGGVEEYRVIEAV 274 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KPIV + G A + GHAGA + A +K M+ AG + Sbjct: 275 KNGII---TKPIVAWAIGTCASMFKTEVQFGHAGASANSQLETAVEKNKHMRAAGFYVPD 331 Query: 285 SPARIGRSLVELLGSL 300 + + + L L L Sbjct: 332 TFEELPQVLNNLYKKL 347 >gi|154311911|ref|XP_001555284.1| ATP-citrate synthase subunit 1 [Botryotinia fuckeliana B05.10] gi|150850639|gb|EDN25832.1| ATP-citrate synthase subunit 1 [Botryotinia fuckeliana B05.10] Length = 530 Score = 215 bits (547), Expect = 7e-54, Method: Composition-based stats. Identities = 82/316 (25%), Positives = 129/316 (40%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L T+ V GL + G + V G I+ G YW +P Sbjct: 35 LFHDKTRCFVYGLQPRAVQGMLDFDFICKRKTPSVAGIIYTFGGQFVSKMYWGTSETLLP 94 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ V +A + + V + + +E ++ +I I I EG+P + Sbjct: 95 VYQDVEKAMAKHEDVDTVVNFASSRSVYQSTMELLQYPQIKSIAIIAEGVPERRAREILH 154 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 K +IGP G + P S KIG I+ ++RKGSVG +S+SG ++ E Sbjct: 155 AAAKKGVTIIGPATVGGIKPGSFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 214 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + G V IGGD T FID L + AD + +V++GE+GG E + + Sbjct: 215 NIIANTTDGVYEGVAIGGDRYPSTTFIDHLLRYQADPECKILVLLGEVGGVEEYRVIEAV 274 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KPIV + G A + GHAG+ + A K +M++AG + Sbjct: 275 KN---GTITKPIVAWAIGTCASMFKTEVQFGHAGSFANSQLETAATKNKSMRDAGFHVPD 331 Query: 285 SPARIGRSLVELLGSL 300 + + L + L Sbjct: 332 TFEDMPAVLASVYEKL 347 >gi|71006786|ref|XP_758050.1| hypothetical protein UM01903.1 [Ustilago maydis 521] gi|46097551|gb|EAK82784.1| hypothetical protein UM01903.1 [Ustilago maydis 521] Length = 357 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 127/300 (42%), Positives = 176/300 (58%), Gaps = 16/300 (5%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 ++ V+VQG TGKA T HT Q L T VVGG+ P KG + GG PVF ++ + + Sbjct: 54 HSNVIVQGFTGKASTVHT-QISLDMGTNVVGGVAPGKGGSKHLGGR---PVFNSIKQVLD 109 Query: 68 RT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLI 125 +A+ ++VPP+ A DAIIE+I AEIPLIV + EG+PV D RV L +S SRL+ Sbjct: 110 AGIRVDATSVFVPPALAADAIIEAINAEIPLIVSVAEGVPVKDQFRVMEALHSQSKSRLL 169 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 G N PG P C++GI P G VGI+SRSGTL+YEA + T + +GQS +G+GG Sbjct: 170 GANSPGFCNPRGCRMGISPLITCAPGPVGIVSRSGTLSYEAAYAT--KPIGQSYILGLGG 227 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA--------AQFLKDEAKRGRKK 237 D GT ++ LE D T++IV+ GEIGG+ EEE ++ + K K Sbjct: 228 DFYPGTRTVEALEFLFNDPNTQAIVLAGEIGGTMEEEVYALLHDPNCKYRQAHDKDKFVK 287 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 PIVGF+AG PPG+ GHAGA+ A +K +AGI +A + A +G+ + + + Sbjct: 288 PIVGFIAGLNTPPGQMFGHAGAIWRDNTSSAVEKKMMWNDAGIRMADAIADVGKLIQQEM 347 >gi|119357117|ref|YP_911761.1| ATP citrate lyase subunit 2 [Chlorobium phaeobacteroides DSM 266] gi|119354466|gb|ABL65337.1| ATP citrate lyase subunit 2 [Chlorobium phaeobacteroides DSM 266] Length = 610 Score = 214 bits (546), Expect = 9e-54, Method: Composition-based stats. Identities = 100/318 (31%), Positives = 173/318 (54%), Gaps = 18/318 (5%) Query: 1 MSILVDKNTK-VLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGST----YWTGGN 53 MSIL +K+T+ V++ G+ G Q V ++P + Y G Sbjct: 1 MSILANKDTRAVIIGGIAGLNAARRMAQFDFLVNRPLTVQAFVYPPEEGQQKEIYRGGEL 60 Query: 54 VNVPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMV 111 N+ V++++ +A E N ++IY+ S A + E++E+ I L+ ITEG+P D Sbjct: 61 KNIAVYSSLEKALEEHPEINTALIYIGASRAFQSAKEALESKGIKLVSMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGTLT 163 R++ +++ GP+ GI++ C++G++ G +++R GS G++++SG L+ Sbjct: 121 RLRKLAAENNKLFNGPSSIGIMSAGECRLGVIGGEFKNLKLCNLYRPGSFGVITKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 EA++ +Q G G +TAV IGGD GT+F+ LE+F D T+++V+VGE+GG+ EEEA Sbjct: 181 NEAMWLCAQNGNGITTAVAIGGDSFPGTDFVTYLEMFENDPDTKAVVIVGEVGGTLEEEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS-GGKGGAEDKINAMKEAGICI 282 A +L E +R R +G + P G GHAGA G G A K+NA+++AG + Sbjct: 241 ADWLAAEKRRIRLIAAIGGTCQEVLPQGMKFGHAGAKEGKKGLGSARSKMNALRDAGALV 300 Query: 283 APSPARIGRSLVELLGSL 300 + + +++ ++ L Sbjct: 301 PDTFGGLSKAIKQVYEEL 318 >gi|321258632|ref|XP_003194037.1| ATP-citrate synthase subunit 1 (ATP-citrate (pro-S-)-lyase 1) [Cryptococcus gattii WM276] gi|317460507|gb|ADV22250.1| ATP-citrate synthase subunit 1 (ATP-citrate (pro-S-)-lyase 1), putative [Cryptococcus gattii WM276] Length = 1150 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 83/315 (26%), Positives = 133/315 (42%), Gaps = 22/315 (6%) Query: 5 VDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPV 58 D++T+ V GL + G + + V I+P G YW +PV Sbjct: 536 FDEHTRSFVFGLQPRAIQGMLDFDFSCGRKVPSVAAMIYPFGGHHIQKFYWGTKETLLPV 595 Query: 59 FTTV-AEAKERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKAR 116 +T+V K+ + V + + +E + +I I I EG+P + Sbjct: 596 YTSVGEAIKKHPDVDVVVNFASSRSVYASTLEILSFPQIKAIGIIAEGVPERHARELLHL 655 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 K +IGP G + P +IG ++ ++R GSVG +S+SG ++ E Sbjct: 656 ALKKEVIIIGPATVGGIKPGCFRIGNTGGMMDNLIACKLYRPGSVGYVSKSGGMSNELNN 715 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 S G V IGGD GT FID L + AD + ++++GE+GG+ E + +K Sbjct: 716 ILSYTTNGVYEGVAIGGDRYPGTSFIDHLLRYEADPECKMLLLLGEVGGTEEYRVIEAVK 775 Query: 229 DEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 K KKPIV + G A GHAG++ + A+ K AM AG + + Sbjct: 776 ---KGIIKKPIVAWAIGTCAKMFTSEVQFGHAGSMANSDMETADAKNRAMMAAGFIVPDT 832 Query: 286 PARIGRSLVELLGSL 300 + +L + L Sbjct: 833 FEDLPDTLKVVYNQL 847 >gi|326904828|gb|EGE51761.1| LOW QUALITY PROTEIN: succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis W-148] Length = 226 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 112/226 (49%), Positives = 151/226 (66%), Gaps = 10/226 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 4 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 62 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 63 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 122 Query: 116 RL--EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 +R+IGPNCPGI++P GI P +I G +G++S+SGTLTY+ +F+ Sbjct: 123 YNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRD- 181 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSA 219 LG STA+GIGGDPV GT ID +E F D T+ IVM+GEIGG A Sbjct: 182 -LGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDA 226 >gi|268569740|ref|XP_002648327.1| Hypothetical protein CBG24512 [Caenorhabditis briggsae] Length = 1112 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 79/316 (25%), Positives = 140/316 (44%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + +TK ++ G K G + VV +P K Y+ + +P Sbjct: 499 LFETDTKAIIWGQQVKAIQGMLDFDFVCRRDSPSVVASTYPFTGDNKQKFYFGQKEILIP 558 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A+ + + + ++E++E +I +I I EG+P ++ Sbjct: 559 AYKSMAKAFATHPEASIMITFASMRSVFETVLEALEFPQIKVIAIIAEGVPENQTRKLLK 618 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 LIGP G + P + KIG I+ ++R GSV +SRSG ++ E Sbjct: 619 IAHDRGVTLIGPATVGGIKPGAFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 678 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD G+ + D + + D + IV++GE+GG E + + L Sbjct: 679 NIISQNTDGVYEGIAIGGDRYPGSTYTDHIIRYQNDNRVKMIVLLGEVGGVEEYKIVEIL 738 Query: 228 KDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K ++ KP+V + G A GHAGA + A K A++ +G + P Sbjct: 739 K---QKKVTKPLVAWCIGTCADHITSEVQFGHAGASANALGETATCKNAALRASGALVPP 795 Query: 285 SPARIGRSLVELLGSL 300 S +G+++ ++ +L Sbjct: 796 SFDDLGKTIRQVYDNL 811 >gi|309366645|emb|CAP21104.2| hypothetical protein CBG_24512 [Caenorhabditis briggsae AF16] Length = 1106 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 79/316 (25%), Positives = 140/316 (44%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + +TK ++ G K G + VV +P K Y+ + +P Sbjct: 492 LFETDTKAIIWGQQVKAIQGMLDFDFVCRRDSPSVVASTYPFTGDNKQKFYFGQKEILIP 551 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A+ + + + ++E++E +I +I I EG+P ++ Sbjct: 552 AYKSMAKAFATHPEASIMITFASMRSVFETVLEALEFPQIKVIAIIAEGVPENQTRKLLK 611 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 LIGP G + P + KIG I+ ++R GSV +SRSG ++ E Sbjct: 612 IAHDRGVTLIGPATVGGIKPGAFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 671 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD G+ + D + + D + IV++GE+GG E + + L Sbjct: 672 NIISQNTDGVYEGIAIGGDRYPGSTYTDHIIRYQNDNRVKMIVLLGEVGGVEEYKIVEIL 731 Query: 228 KDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K ++ KP+V + G A GHAGA + A K A++ +G + P Sbjct: 732 K---QKKVTKPLVAWCIGTCADHITSEVQFGHAGASANALGETATCKNAALRASGALVPP 788 Query: 285 SPARIGRSLVELLGSL 300 S +G+++ ++ +L Sbjct: 789 SFDDLGKTIRQVYDNL 804 >gi|171687991|ref|XP_001908936.1| hypothetical protein [Podospora anserina S mat+] gi|170943957|emb|CAP69609.1| unnamed protein product [Podospora anserina S mat+] Length = 634 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 117/296 (39%), Positives = 171/296 (57%), Gaps = 21/296 (7%) Query: 12 LVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAA 71 + QG TGK T + + +I + T +VGG+ P + TG ++ +PV TV Sbjct: 1 MFQGFTGKQATANAKDSIAW-GTNIVGGVRPGR-----TGEHLGLPVLPTVQS------V 48 Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCP 130 A+ IYV A AI E+IEAE+PLIV + E IP+ DM+R+ + L+ +S SRL+GPN P Sbjct: 49 YATAIYVAAHQAPGAIEEAIEAEVPLIVAVAEHIPLHDMLRIHSILKTQSKSRLVGPNSP 108 Query: 131 GILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 GI++ C+IG P F G +GI+++SGTL+YE V T++ GLGQS +G+GGD V Sbjct: 109 GIISAVGKCRIGFQPLPCFSPGKIGIIAKSGTLSYETVASTTRAGLGQSLCIGVGGDIVP 168 Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL-------KDEAKRGRKKPIVGF 242 GT+ + + D TE+I ++GEIGG E +AA++ + +PIVG Sbjct: 169 GTDLREAFTVLENDSDTEAIAVIGEIGGLGELDAAEWYYSDLLSFSHTNSKLNHRPIVGL 228 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +AG P GR MGHAGA G+ A++KI A+ AG+ + P + G + LG Sbjct: 229 IAGIHEPRGRIMGHAGAFTIAGEPDAKEKIEALVSAGVTMVTHPGQFGEAFKARLG 284 >gi|323307188|gb|EGA60471.1| Lsc1p [Saccharomyces cerevisiae FostersO] Length = 271 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 127/248 (51%), Positives = 167/248 (67%), Gaps = 5/248 (2%) Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PVF +V +A + T A AS I+VPP A AI ESIEAEIPL VCITEGIP DM+ + Sbjct: 22 PVFASVKDAIKETGATASAIFVPPPIAAAAIKESIEAEIPLAVCITEGIPQHDMLYIAEM 81 Query: 117 LE-KSSSRLIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 L+ + +RL+GPNCPGI+ P +IGI P IF+ G +GI+SRSGTLTYEAV QT++ Sbjct: 82 LQTQDKTRLVGPNCPGIINPATKVRIGIQPPKIFQAGKIGIISRSGTLTYEAVQQTTKTD 141 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KR 233 LGQS +G+GGD GT+FID L+LFL DE TE I+M+GEIGG AE EAAQFLK+ R Sbjct: 142 LGQSLVIGMGGDAFPGTDFIDALKLFLEDETTEGIIMLGEIGGKAEIEAAQFLKEYNFSR 201 Query: 234 GRKKPIVGFVAGKTA--PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 + P+ F+AG A G MGH+GA++ G AE K A+++ G+ + SP +G+ Sbjct: 202 SKPMPVASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKKALRDVGVAVVESPGYLGQ 261 Query: 292 SLVELLGS 299 +L++ Sbjct: 262 ALLDQFAK 269 >gi|308489338|ref|XP_003106862.1| hypothetical protein CRE_17185 [Caenorhabditis remanei] gi|308252750|gb|EFO96702.1| hypothetical protein CRE_17185 [Caenorhabditis remanei] Length = 1112 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + +TK +V G K G + VV +P K Y+ + +P Sbjct: 492 LFEDDTKAIVWGQQAKAIQGMLDFDYVCRRNSPSVVASTYPFTGDNKQKYYFGQKEILIP 551 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A+ V + + ++E++E +I +I I EG+P ++ Sbjct: 552 AYKSMAKAFATHPEASVMVTFASMRSVFETVLEALEFPQIKVIAIIAEGVPENQTRKLLK 611 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 LIGP G + P + KIG I+ ++R GSV +SRSG ++ E Sbjct: 612 IAHDRGVTLIGPATVGGIKPGAFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 671 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD G+ + D + + D+ + IV++GE+GG E + L Sbjct: 672 NIISQNTNGVYEGIAIGGDRYPGSTYTDHVIRYQNDDRVKMIVLLGEVGGVEEYKIVDLL 731 Query: 228 KDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K ++ KP+V + G A GHAGA + A K A++ +G + Sbjct: 732 K---QKKVTKPLVAWCIGTCADHITSEVQFGHAGASANALGETAACKNAALRASGALVPE 788 Query: 285 SPARIGRSLVELLGSL 300 S +G + + L Sbjct: 789 SFDDLGNKIRQTYDEL 804 >gi|308500690|ref|XP_003112530.1| hypothetical protein CRE_30753 [Caenorhabditis remanei] gi|308267098|gb|EFP11051.1| hypothetical protein CRE_30753 [Caenorhabditis remanei] Length = 1099 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 80/316 (25%), Positives = 133/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + +TK ++ G K G + VV +P K Y + +P Sbjct: 488 LFENDTKAVIWGQQHKAIQGMLDFDYVCRRHSPSVVASTYPFTGDNKQKFYCGQKEILIP 547 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A V + + ++E+++ +I +I I EG+P ++ Sbjct: 548 AYKSMAKAFASHPDATVMVTFASMRSVFETVLEALQFPQIKVIAIIAEGVPENQTRKLLK 607 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 E LIGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 608 VAEDKGVTLIGPATVGGIKPGCFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 667 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD G+ + D + + D+ + IV++GE+GG E + L Sbjct: 668 NIISQNTNGVYEGIAIGGDRYPGSTYTDHVLRYQHDDRVKMIVLLGEVGGVEEYRIVELL 727 Query: 228 KDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K + KP++ + G A GHAGA +G A K A++ AG + Sbjct: 728 KA---KKITKPLIAWCIGTCADHITSEVQFGHAGASANGQGETAACKNTALRVAGALVPD 784 Query: 285 SPARIGRSLVELLGSL 300 S +G + + L Sbjct: 785 SFDDLGNKIRQTYEEL 800 >gi|258572700|ref|XP_002545112.1| ATP-citrate synthase subunit 1 [Uncinocarpus reesii 1704] gi|237905382|gb|EEP79783.1| ATP-citrate synthase subunit 1 [Uncinocarpus reesii 1704] Length = 648 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 81/312 (25%), Positives = 133/312 (42%), Gaps = 22/312 (7%) Query: 8 NTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPVFTT 61 T+ V G+ + G + V G I+ G YW +PV+ + Sbjct: 31 KTRCFVYGMQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLPVYQS 90 Query: 62 VAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARLEK 119 +A + + V + + +E ++ +I I I EG+P + ++ Sbjct: 91 AGKAMAKHSDVDVVVNFASSRSVYSSTMELMQYPQIKTIAIIAEGVPERRAREIMVTAKE 150 Query: 120 SSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 +IGP G + P + KIG I+ ++RKGSVG +S+SG ++ E S Sbjct: 151 KGVTIIGPATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELNNIVS 210 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 Q G + IGGD GT F+D + F AD A + ++++GE+GG E +K+ Sbjct: 211 QTTDGVYEGIAIGGDRYPGTTFLDHMLRFQADPACKILLLLGEVGGVEEYRVIDAVKN-- 268 Query: 232 KRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 KP+V + G A + GHAGA + A K AM+EAGI + + Sbjct: 269 -GTITKPVVAWAIGTCASMFKTEVQFGHAGASANSQLETAVMKNQAMREAGIHVPNTFEE 327 Query: 289 IGRSLVELLGSL 300 + +L + L Sbjct: 328 LPETLRGVYQKL 339 >gi|58260100|ref|XP_567460.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134116646|ref|XP_772995.1| hypothetical protein CNBJ2710 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255615|gb|EAL18348.1| hypothetical protein CNBJ2710 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229510|gb|AAW45943.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 1149 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 76/312 (24%), Positives = 127/312 (40%), Gaps = 16/312 (5%) Query: 5 VDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPV 58 D++T+ V GL + G + + V I+P G YW +PV Sbjct: 535 FDEHTRSFVFGLQPRAIQGMLDFDFSCGRKVPSVAAMIYPFGGHHIQKFYWGTKETLLPV 594 Query: 59 FTTV-AEAKERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKAR 116 +T+V K+ + V + + +E + +I I I EG+P + Sbjct: 595 YTSVGEAIKKHPDVDVVVNFASSRSVYASTLEILSFPQIKAIGIIAEGVPERHARELLHL 654 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 K +IGP G + P +IG ++ ++R GSVG +S+SG ++ E Sbjct: 655 ALKKQVIIIGPATVGGIKPGCFRIGNTGGMMDNLIACKLYRPGSVGYVSKSGGMSNELNN 714 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 S G V IGGD GT FID L + AD + ++++GE+GG+ E + +K Sbjct: 715 ILSYTTNGVYEGVAIGGDRYPGTSFIDHLLRYEADPECKMLLLLGEVGGTEEYRVIEAVK 774 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + K GHAG++ + A+ K AM+ AG + + Sbjct: 775 KGIIKKPIIAWAIGTCAKMFTSEVQFGHAGSMANSDMETADAKNRAMRAAGFIVPDTFED 834 Query: 289 IGRSLVELLGSL 300 + +L + L Sbjct: 835 LPDTLKAVYNQL 846 >gi|320170052|gb|EFW46951.1| ATP citrate-lyase [Capsaspora owczarzaki ATCC 30864] Length = 1105 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 79/317 (24%), Positives = 134/317 (42%), Gaps = 23/317 (7%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 L +T+ ++ G+ + G + + V ++P G YW + VP Sbjct: 493 LFSTSTRSIIFGMQPRAVQGMLDFDHVCRRERPSVAAMVYPFSGDHTQKYYWGSKEILVP 552 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE--AEIPLIVCITEGIPVLDMVRVK 114 + +++A + A+ + + A +E+++ +I I I EGIP + Sbjct: 553 CYQRLSDAIKAHADADVVINFASFRSAYATTLEALQFHKQIRTIAIIAEGIPENRTRDLI 612 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEA 166 + + +IGP G + P +IG IM ++R GSV +SRSG ++ E Sbjct: 613 FKGREVGVTVIGPATVGGIKPGCFRIGNTGGMLDNIMTSKLYRAGSVAYVSRSGGMSNEL 672 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 S+ G V IGGD GT FID L + AD + +V++GE+GG+ E + Sbjct: 673 NNIISRTTNGVYEGVAIGGDRYPGTTFIDHLFRYQADPEVKMLVLLGEVGGTEEYDICDA 732 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 +K KP+V + G A GHAGA + A K A+++AG + Sbjct: 733 IK---SGKLTKPLVAWCIGTCASMFTSEVQFGHAGACANADNETAVAKNKALRDAGAIVP 789 Query: 284 PSPARIGRSLVELLGSL 300 S + ++ L Sbjct: 790 SSFDSLDTAIRATYDQL 806 >gi|17551266|ref|NP_508280.1| hypothetical protein D1005.1 [Caenorhabditis elegans] gi|1703082|sp|P53585|ACLY_CAEEL RecName: Full=Probable ATP-citrate synthase; AltName: Full=ATP-citrate (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme gi|1326262|gb|AAB00585.1| Hypothetical protein D1005.1 [Caenorhabditis elegans] Length = 1106 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 78/316 (24%), Positives = 134/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + +TK ++ G K G + VV +P K Y+ + +P Sbjct: 492 LFEDDTKAIIWGQQAKAIQGMLDFDYVCRRSSPSVVASTYPFTGDNKQKYYFGQKEILIP 551 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A+ V + + ++E++E +I +I I EG+P ++ Sbjct: 552 AYKSMAKAFATHPDASIMVTFASMRSVFETVLEALEFPQIKVIAIIAEGVPENQTRKLLK 611 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 L+GP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 612 IAHDRGVTLVGPATVGGIKPGCFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 671 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 SQ G + IGGD G+ + D + + D+ + IV++GE+GG E + L Sbjct: 672 NIISQNTNGVYEGIAIGGDRYPGSTYTDHVIRYQNDDRVKMIVLLGEVGGVEEYKIVDLL 731 Query: 228 KDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K ++ KP+V + G A GHAGA + A K A++ +G + Sbjct: 732 K---QKKVTKPLVAWCIGTCADHITSEVQFGHAGASANALGETAACKNAALRASGALVPE 788 Query: 285 SPARIGRSLVELLGSL 300 S +G + + L Sbjct: 789 SFDDLGNKIRQTYDEL 804 >gi|194336479|ref|YP_002018273.1| ATP-citrate lyase/succinyl-CoA ligase [Pelodictyon phaeoclathratiforme BU-1] gi|194308956|gb|ACF43656.1| ATP-citrate lyase/succinyl-CoA ligase [Pelodictyon phaeoclathratiforme BU-1] Length = 610 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 100/318 (31%), Positives = 170/318 (53%), Gaps = 18/318 (5%) Query: 1 MSILVDKNTK-VLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGST----YWTGGN 53 MSIL +K+T+ V++ G+ G Q V ++P + Y G Sbjct: 1 MSILANKDTRAVIIGGIAGLNAARRMAQFDFLINRPLTVQAFVYPPEEGQQKEIYRGGEL 60 Query: 54 VNVPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMV 111 NV V++++ +A E N ++IY+ S A + E+++A I L+ ITEG+P D Sbjct: 61 NNVTVYSSLEKALEENPQINTALIYIGASRAYQSAKEALDAKGIKLVTMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGTLT 163 R++ S GP+ GI++ C++G++ G +++R GS G++++SG L+ Sbjct: 121 RLRKHAIDSGKIFNGPSSIGIMSAGECRLGVIGGEFKNLKLCNLYRPGSFGVITKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 EA++ +Q G G ++AV IGGD GT+F+ L +F D T+++V++GE+GG+ EEEA Sbjct: 181 NEAMWLCAQNGNGITSAVAIGGDSYPGTDFVTYLNMFENDPDTKAVVIIGEVGGTLEEEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS-GGKGGAEDKINAMKEAGICI 282 A++L E +R + +G P G GHAGA G G A KINA++EAG + Sbjct: 241 AEWLGKEIRRIKLIASIGGTCQDVLPQGMKFGHAGAKEGKKGLGSARSKINALREAGAVV 300 Query: 283 APSPARIGRSLVELLGSL 300 + + +++ ++ L Sbjct: 301 PDTFGGLSKAIKQVYLEL 318 >gi|299134898|ref|ZP_07028090.1| CoA-binding domain protein [Afipia sp. 1NLS2] gi|298590708|gb|EFI50911.1| CoA-binding domain protein [Afipia sp. 1NLS2] Length = 297 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 127/289 (43%), Positives = 183/289 (63%), Gaps = 13/289 (4%) Query: 10 KVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT 69 KVLVQG+TGK G F +E+ + T V G++PK+ + ++ P++ + EA + T Sbjct: 8 KVLVQGMTGKQGAFWSER-MREMGTDVAAGVNPKRAGETF----LDTPIYGSAVEATKHT 62 Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC 129 + SVI++PPS A AII++I+A I IV +TE IP D++ + AR S SR+IGPN Sbjct: 63 PCDVSVIFIPPSMAKAAIIDAIDAGIGTIVTLTEHIPAHDVLEIFARQRVSKSRIIGPNT 122 Query: 130 PGILTPDSCKIGIMPGSI---FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 GI+TP +GIMPG F+ G VG++SRSG+L ++ LGQS +GIGGD Sbjct: 123 AGIVTPGEGFVGIMPGHNPNIFKPGRVGVISRSGSLGTLMCLNLTRANLGQSAFIGIGGD 182 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P+ GT D L D T+++V+VGEIGG+ EEEAA E R KKPIV F+AG+ Sbjct: 183 PIIGTTTRDALMELDRDAKTDAVVLVGEIGGAMEEEAA-----EYARTMKKPIVSFIAGR 237 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 ++PP + MGHAGA+++GG+GG K A+++AGI +A +PA + L + Sbjct: 238 SSPPDKKMGHAGAIVTGGRGGYASKRAALEKAGIQVADTPAEVVAILKQ 286 >gi|159124521|gb|EDP49639.1| ATP citrate lyase, subunit 1, putative [Aspergillus fumigatus A1163] Length = 725 Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats. Identities = 80/304 (26%), Positives = 130/304 (42%), Gaps = 22/304 (7%) Query: 15 GLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPVFTTVAEAK-E 67 G+ + G + V G I+ G YW +PV+ VA+A + Sbjct: 117 GMQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLPVYQDVAKAMAK 176 Query: 68 RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + V + + +E + +I I I EG+P + ++ +IG Sbjct: 177 HPDVDTVVNFASSRSVYSSTMELMNYPQIKSIAIIAEGVPERRAREIMVTAKEKGITIIG 236 Query: 127 PNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 P G + P + KIG I+ ++RKGSVG +S+SG ++ E SQ G Sbjct: 237 PATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELNNIISQTTDGVH 296 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + IGGD GT FID L + AD + ++++GE+GG E + +K+ KP Sbjct: 297 EGIAIGGDRYPGTTFIDHLLRYQADPDCKILLLLGEVGGVEEYRVIEAVKN---GTITKP 353 Query: 239 IVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 +V + G A + GHAGA + A K AM+EAGI + + + + L + Sbjct: 354 LVAWAIGTCASMFKTEVQFGHAGASANSQLETAVYKNKAMREAGIHVPDTFEELPQLLKQ 413 Query: 296 LLGS 299 + Sbjct: 414 VYED 417 >gi|70992209|ref|XP_750953.1| ATP citrate lyase, subunit 1 [Aspergillus fumigatus Af293] gi|66848586|gb|EAL88915.1| ATP citrate lyase, subunit 1, putative [Aspergillus fumigatus Af293] Length = 724 Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats. Identities = 80/304 (26%), Positives = 130/304 (42%), Gaps = 22/304 (7%) Query: 15 GLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPVFTTVAEAK-E 67 G+ + G + V G I+ G YW +PV+ VA+A + Sbjct: 116 GMQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLPVYQDVAKAMAK 175 Query: 68 RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + V + + +E + +I I I EG+P + ++ +IG Sbjct: 176 HPDVDTVVNFASSRSVYSSTMELMNYPQIKSIAIIAEGVPERRAREIMVTAKEKGITIIG 235 Query: 127 PNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 P G + P + KIG I+ ++RKGSVG +S+SG ++ E SQ G Sbjct: 236 PATVGGIKPGAFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELNNIISQTTDGVH 295 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + IGGD GT FID L + AD + ++++GE+GG E + +K+ KP Sbjct: 296 EGIAIGGDRYPGTTFIDHLLRYQADPDCKILLLLGEVGGVEEYRVIEAVKN---GTITKP 352 Query: 239 IVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 +V + G A + GHAGA + A K AM+EAGI + + + + L + Sbjct: 353 LVAWAIGTCASMFKTEVQFGHAGASANSQLETAVYKNKAMREAGIHVPDTFEELPQLLKQ 412 Query: 296 LLGS 299 + Sbjct: 413 VYED 416 >gi|325295316|ref|YP_004281830.1| ATP citrate synthase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065764|gb|ADY73771.1| ATP citrate synthase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 616 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 77/316 (24%), Positives = 137/316 (43%), Gaps = 21/316 (6%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQT-QVVGGIHPKKG----STYWTGGNVNVP 57 +L D+NTK + L A + +T +V + P + ++ + +P Sbjct: 7 VLFDRNTKAIFWNLNRNAIQRMLDYDYTVGRTPSIVAIVAPTQNRKFEKFFFGTQEIMIP 66 Query: 58 VF-TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMVRVKA 115 ++ +TV A++ A+ V + A + IE++ I + EGIP + Sbjct: 67 IYKSTVEAAEKHPEADVLVNFASFRTAYNVTIEALNIPTIRTVAITAEGIPERLARDMAY 126 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + + +IG I+ + R GS G+++RSG L E Sbjct: 127 KAKQLGKWIIGPATVGGIAAGAFRIGNAGGTIENIVKSKLHRPGSCGLVTRSGGLFNELS 186 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G + IGGD G++F+D L F + + ++M+GE+GG E + A+ + Sbjct: 187 NIIARNADGIVEGIAIGGDRFPGSDFLDHLIRFQKNPQVKYMIMLGEVGGELEYKVAEAI 246 Query: 228 KDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K KP++ + G A GHAGA + A+ K A+KEAG + Sbjct: 247 KSGLI---TKPVIAWCIGTIAKHFGGEVQFGHAGAKAGADRETADAKNRALKEAGAIVPD 303 Query: 285 SPARIGRSLVELLGSL 300 S + E+ L Sbjct: 304 SFNDFPEVIREVYEDL 319 >gi|125811843|ref|XP_001362021.1| GA20986 [Drosophila pseudoobscura pseudoobscura] gi|54637198|gb|EAL26601.1| GA20986 [Drosophila pseudoobscura pseudoobscura] Length = 1087 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 81/314 (25%), Positives = 137/314 (43%), Gaps = 28/314 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVPVF 59 TK +V G+ +A + VV ++P K YW + +PV+ Sbjct: 489 FFSNTTKAIVWGMQQRAVQ--------REEPSVVAMVYPFTGDHKQKYYWGHKEILIPVY 540 Query: 60 TTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARL 117 +++A + + V + A ++ +E +E +I + I EGIP ++ Sbjct: 541 KKMSDAIHKNKEVDVLVSFASLRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLILEA 600 Query: 118 EKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 601 DKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELNNI 660 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + L+D Sbjct: 661 ISKATDGVIEGIAIGGDRYPGSTFMDHIMRYQADPETKLIVLLGEVGGTEEYDVCAALQD 720 Query: 230 EAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 KP+V + G A GHAG+ + + A K A++EA + S Sbjct: 721 GRI---TKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKALREARAYVPDSF 777 Query: 287 ARIGRSLVELLGSL 300 +G + + L Sbjct: 778 DTLGELIHHVYSEL 791 >gi|195171228|ref|XP_002026409.1| GL20648 [Drosophila persimilis] gi|194111311|gb|EDW33354.1| GL20648 [Drosophila persimilis] Length = 1069 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 81/314 (25%), Positives = 137/314 (43%), Gaps = 28/314 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVPVF 59 TK +V G+ +A + VV ++P K YW + +PV+ Sbjct: 489 FFSNTTKAIVWGMQQRAVQ--------REEPSVVAMVYPFTGDHKQKYYWGHKEILIPVY 540 Query: 60 TTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARL 117 +++A + + V + A ++ +E +E +I + I EGIP ++ Sbjct: 541 KKMSDAIHKNKEVDVLVSFASLRSAYESTLEVLEFPQIRTVAIIAEGIPENMTRKLILEA 600 Query: 118 EKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 +K +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 601 DKKGVAIIGPATVGGVKPGCFKIGNTGGMLDNILHSKLYRPGSVAYVSRSGGMSNELNNI 660 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 S+ G + IGGD G+ F+D + + AD T+ IV++GE+GG+ E + L+D Sbjct: 661 ISKATDGVIEGIAIGGDRYPGSTFMDHIMRYQADPETKLIVLLGEVGGTEEYDVCAALQD 720 Query: 230 EAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 KP+V + G A GHAG+ + + A K A++EA + S Sbjct: 721 GRI---TKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETATAKNKALREARAYVPDSF 777 Query: 287 ARIGRSLVELLGSL 300 +G + + L Sbjct: 778 DTLGELIHHVYSEL 791 >gi|295667892|ref|XP_002794495.1| succinyl-CoA ligase subunit alpha [Paracoccidioides brasiliensis Pb01] gi|226285911|gb|EEH41477.1| succinyl-CoA ligase subunit alpha [Paracoccidioides brasiliensis Pb01] Length = 670 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 116/302 (38%), Positives = 171/302 (56%), Gaps = 35/302 (11%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +T+VL QG TG +L QT ++ Sbjct: 46 NLKIGAHTRVLFQGFTG----------MLNMQT----------------------GNMSS 73 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 +A+E+ +A+ IYVP AI E++EAEIPLIV + E +P+ D++RV A L+ +S Sbjct: 74 QCKAQEKVRPDATAIYVPGPQTAQAIEEAVEAEIPLIVAVAEHVPIHDILRVHAMLKTQS 133 Query: 121 SSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 SRL+G NCPGI++ C+IG P F G +GI+++SGTL YE V T++ GLGQS Sbjct: 134 KSRLVGANCPGIISAIGKCRIGFQPLPCFSPGHIGIVAKSGTLGYETVASTTRAGLGQSL 193 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKP 238 +G+GGD + GT+F+D L +F D+ T I++VGEIGG+AE AA+++ +R KP Sbjct: 194 CIGMGGDVLAGTDFVDALSIFEHDDDTHGIIIVGEIGGTAEIAAAEWIVHYRRRSANPKP 253 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 I+ V G AP GR MGHAGA + G+ A+ KI A+ AG + P G + LL Sbjct: 254 IMAVVGGIHAPLGRVMGHAGAWVGPGEPDAQTKIKALHNAGAVMVHHPENFGEGMKMLLS 313 Query: 299 SL 300 ++ Sbjct: 314 NM 315 >gi|110597563|ref|ZP_01385849.1| CoA-binding:ATP-citrate lyase/succinyl-CoA ligase [Chlorobium ferrooxidans DSM 13031] gi|110340882|gb|EAT59356.1| CoA-binding:ATP-citrate lyase/succinyl-CoA ligase [Chlorobium ferrooxidans DSM 13031] Length = 610 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 101/318 (31%), Positives = 169/318 (53%), Gaps = 18/318 (5%) Query: 1 MSILVDKNTK-VLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGST----YWTGGN 53 MSIL +K T+ V++ G+ G Q V ++P + Y G Sbjct: 1 MSILANKETRAVIIGGVAGLNAARRMAQFDFLINRPLTVQAFVYPPEEGQQKEIYRGGEL 60 Query: 54 VNVPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMV 111 NV V++++ +A E N ++IY+ S A + E+++A I L+ ITEG+P D Sbjct: 61 NNVTVYSSLEQALEENPQINTALIYIGSSRAYQSAKEALDAKGIKLVSMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI--------FRKGSVGILSRSGTLT 163 R++ ++ GP+ GIL+ C++G++ G +R GS G++++SG L+ Sbjct: 121 RLRKYALETGKIFNGPSSIGILSAGECRLGVIGGEYKNLKLCNLYRSGSFGVITKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 EA++ +Q G G +TAV IGGD GT+F+ LE+F D T+++V+VGE+GG+ EEEA Sbjct: 181 NEAMWLCAQNGNGVTTAVAIGGDSYPGTDFVTYLEMFENDPETKAVVIVGEVGGTLEEEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS-GGKGGAEDKINAMKEAGICI 282 A +L E +R + +G + P G GHAGA G G A K+NA+++AG + Sbjct: 241 ADWLGAEVRRIKVIAAIGGTCQEVLPQGMKFGHAGAKEGKKGLGSARSKMNALRDAGAVV 300 Query: 283 APSPARIGRSLVELLGSL 300 + + +++ ++ L Sbjct: 301 PDTFGGLSKAIKQVYQEL 318 >gi|218460668|ref|ZP_03500759.1| succinyl-CoA synthetase subunit alpha [Rhizobium etli Kim 5] Length = 192 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 156/191 (81%), Positives = 180/191 (94%) Query: 108 LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 +DMVRVKARL++S SRL+GPNCPGILTP+ CKIGIMPGSIFRKGSVGI+SRSGTLTYEAV Sbjct: 1 MDMVRVKARLDRSKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAV 60 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 FQTS EGLGQ+TAVGIGGDPVKGTEFIDVLE+FLADEAT+SI+M+GEIGGSAEE+AAQFL Sbjct: 61 FQTSNEGLGQTTAVGIGGDPVKGTEFIDVLEMFLADEATQSIIMIGEIGGSAEEDAAQFL 120 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 KDEAK+GRKKP+ GF+AG+TAP GRTMGHAGAV+SGGKG AE KI AM+ AGI ++PSPA Sbjct: 121 KDEAKKGRKKPMAGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIRVSPSPA 180 Query: 288 RIGRSLVELLG 298 R+G++LVE+L Sbjct: 181 RLGKTLVEVLK 191 >gi|114054981|gb|ABI50076.1| ATP citrate lyase alpha subunit [Balnearium lithotrophicum] Length = 541 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 85/316 (26%), Positives = 136/316 (43%), Gaps = 21/316 (6%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ-TQVVGGIHP----KKGSTYWTGGNVNVP 57 IL D+NTK + L A + L + +V + P K ++ + +P Sbjct: 7 ILFDRNTKAIFWNLNRNAIQRMLDYDYLVGRSPSIVAIVAPTQSRKFEKFFYGTEEIMIP 66 Query: 58 VFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 ++ + EA E A+ V + A D IE+I I I EGIP + A Sbjct: 67 IYRSTTEAAEEHPDADVLVNFASFRTAYDVTIEAINLPTIRTIAITAEGIPERLARDMAA 126 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 R + S +IGP G + + +IG I+ + R GS G+++RSG L E Sbjct: 127 RAKASGKWIIGPATVGGIAAGAFRIGNAGGTLENIVKSKLHRPGSCGLVTRSGGLFNELS 186 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G + IGGD G++F+D L F + A + ++M+GE+GG E A+ + Sbjct: 187 NIIARNADGIVEGIAIGGDRFPGSDFLDHLMRFQKNPAVKYMIMLGEVGGELEYRVAEAI 246 Query: 228 KDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K + KP++ + G A GHAGA + A+ K A+KEAG + Sbjct: 247 K---RGDITKPVIAWCIGTIAKHFGGEVQFGHAGAKAGADRETADAKNRALKEAGAIVPE 303 Query: 285 SPARIGRSLVELLGSL 300 S + + L Sbjct: 304 SFNDFPEVIRSVYEDL 319 >gi|114054991|gb|ABI50078.1| ATP citrate lyase alpha subunit [Desulfurobacterium crinifex] Length = 540 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 77/316 (24%), Positives = 137/316 (43%), Gaps = 21/316 (6%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQT-QVVGGIHPKKG----STYWTGGNVNVP 57 +L D+NTK + L A + +T +V + P + ++ + +P Sbjct: 7 VLFDRNTKAIFWNLNRNAIQRMLDSDYTVGRTPSIVAIVAPTQNRKFEKFFFGTQEIMIP 66 Query: 58 VF-TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMVRVKA 115 ++ +TV A++ A+ V + A + IE++ I + EGIP + Sbjct: 67 IYKSTVEAAEKHPEADVLVNFASFRTAYNVTIEALNIPTIRTVAITAEGIPERLARDMAH 126 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + + +IG I+ + R GS G+++RSG L E Sbjct: 127 KAKQLGKWIIGPATVGGIAAGAFRIGNAGGTIENIVKSKLHRPGSCGLVTRSGGLFNELS 186 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G + IGGD G++F+D L F + + ++M+GE+GG E + A+ + Sbjct: 187 NIIARNADGIVEGIAIGGDRFPGSDFLDHLIRFQKNPQVKYMIMLGEVGGELEYKVAEAI 246 Query: 228 KDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K KP++ + G A GHAGA + A+ K A+KEAG + Sbjct: 247 K---SGPITKPVIAWCIGTIAKHFGGEVQFGHAGAKAGADRETADAKNRALKEAGAIVPD 303 Query: 285 SPARIGRSLVELLGSL 300 S + E+ L Sbjct: 304 SFNDFPEVIREVYEDL 319 >gi|225851244|ref|YP_002731478.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(Citrate cleavage enzyme) [Persephonella marina EX-H1] gi|225646316|gb|ACO04502.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(Citrate cleavage enzyme) [Persephonella marina EX-H1] Length = 616 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 74/313 (23%), Positives = 133/313 (42%), Gaps = 15/313 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ-TQVVGGIHP----KKGSTYWTGGNVNVP 57 +L D+NTK + L A + + + +V + P K ++ + +P Sbjct: 7 LLFDRNTKAIFWNLNRNAIQRMLDYDYVVGRDPSIVAIVAPTQSRKFDKFFYGTQEIMIP 66 Query: 58 VFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMVRVKA 115 ++ + EA E A+ + + A D +E+++ I I EGIP ++ Sbjct: 67 IYKSTPEAAEDFPEADVLLNFASFRTAYDVTMEALDIPTIRTIAITAEGIPERFARIMRI 126 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P + +I I+ + R GSVG+++RSG L E Sbjct: 127 KAKELGKWIIGPATVGGIAPGAFRIANTGGTIENIVNSKLHRPGSVGLVTRSGGLFNELS 186 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G + + IGGD GT+F+D + F + + +V++GE+GG E A+ + Sbjct: 187 NVIARNANGIAEGIAIGGDRYPGTDFLDHMLRFEKNPQVKMMVLLGEVGGELEYRVAEAI 246 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 KD K GHAGA + A+ K A++EAG + S Sbjct: 247 KDGRITKPVIAWCIGTISKYFGGEVQFGHAGAKAGAERETADAKNEALREAGAYVPKSFN 306 Query: 288 RIGRSLVELLGSL 300 + + + L Sbjct: 307 DLPELINGVYEEL 319 >gi|34558815|gb|AAQ75159.1| citrate lyase subunit 2 [Alvinella pompejana epibiont 7G3] Length = 601 Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats. Identities = 84/319 (26%), Positives = 133/319 (41%), Gaps = 22/319 (6%) Query: 1 MSILVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNV 54 M L K+T+ + T + I + V G + P K +W + Sbjct: 1 MERLFTKDTQAIFWNNNKTAIQRMLDYDYVIKRDKPSVAGIVAPTSSNKFEKFFWGADEI 60 Query: 55 NVPVF-TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMVR 112 VP++ T K + A+ + + A + E+++ +I+ EGIP Sbjct: 61 MVPIYRNTADAKKAQPQADVLLNFASFRTAYNVTNEALDIGGFRVIMITAEGIPERLARA 120 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTY 164 + + +IGP G + P + KI I+ + R GS G+++RSG L Sbjct: 121 MNQKARDLGVTVIGPATVGAIAPGAFKIANIGGTIQNIIKSKLHRAGSCGLVTRSGGLFN 180 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E S G + V IGGD G+ FID L + + +V++GE+GG E + Sbjct: 181 ELSNIISLNADGIAEGVAIGGDRFVGSTFIDNLLRMEKNPDVKYMVLLGEVGGIEEYKVI 240 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 + +K KPI+ + G A G GHAGA + AE K AMKEAGI Sbjct: 241 EAVK---SGEITKPIIAWCIGTIAKYYDSGVQFGHAGASANSDMETAEAKNKAMKEAGIH 297 Query: 282 IAPSPARIGRSLVELLGSL 300 + S + ++ E+ SL Sbjct: 298 VPSSFNDLPATIKEVYESL 316 >gi|119114534|ref|XP_319323.3| AGAP010156-PA [Anopheles gambiae str. PEST] gi|116118462|gb|EAA13829.3| AGAP010156-PA [Anopheles gambiae str. PEST] Length = 1082 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 89/314 (28%), Positives = 141/314 (44%), Gaps = 28/314 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPVF 59 + TK +V G+ +A H ++ VV ++P G YW V +PV+ Sbjct: 484 MFSNRTKAIVWGMQTRA--VHRDE------PSVVAMVYPFTGYHRQKFYWGHKEVLIPVY 535 Query: 60 TTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARL 117 + ++EA + A+ V + A D+ +E ++ +I I I EGIP ++ Sbjct: 536 SKMSEAINKHKEADVLVNFASLRSAYDSSVEVLDYPQIRTIAIIAEGIPENLTRKLNMAA 595 Query: 118 EKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 + + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 596 RERNVAIIGPATVGGVKPGCFKIGNTGGMLDNIIHSKLYRAGSVAYVSRSGGMSNELNNI 655 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 S G V IGGD GT F+D + + AD A + IV++GE+GG E E + LKD Sbjct: 656 LSLTTDGVYEGVAIGGDRYPGTTFMDHIMRYQADPAAKMIVLLGEVGGVEEYEVCEALKD 715 Query: 230 EAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 KP++ + G A GHAG+ + + A K A+ EAG + S Sbjct: 716 GRI---TKPLIAWCIGTCAGMFTSEVQFGHAGSCANSDRETASAKNKALAEAGAHVPASF 772 Query: 287 ARIGRSLVELLGSL 300 G + + S+ Sbjct: 773 DAFGDMIGSVYESM 786 >gi|324502258|gb|ADY40994.1| ATP-citrate synthase [Ascaris suum] Length = 1117 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 78/316 (24%), Positives = 134/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + +TK ++ G K G + Q VV +P K Y+ + +P Sbjct: 499 LFESDTKAVIWGQQIKAVQGMLDFDFVCGREQPSVVASTYPFTGDHKQKFYFGHKEILIP 558 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++ A A+ V + + ++E++E +I +I I EG+P ++ Sbjct: 559 AYKSMKSAFTSHPDASVMVSFASLRSVYETVLEALEHPQIRVIAIIAEGVPENLTRKLIK 618 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + LIGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 619 AASERGVTLIGPATVGGIKPGCFKIGNTGGMMDNILSSKLYRPGSVAYVSRSGGMSNELN 678 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 +Q G + IGGD G+ + D + + D+ + +V++GE+GG E + L Sbjct: 679 NIIAQNTDGVFEGIAIGGDRYPGSTYTDHILRYEHDDRVKMMVLLGEVGGVEEYKIVNAL 738 Query: 228 KDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ + KP++ + G A GHAGA A K A++EAG + Sbjct: 739 KE---KKITKPLIAWCIGTCADYITSEVQFGHAGASADAKAETAAAKNEALREAGAYVPT 795 Query: 285 SPARIGRSLVELLGSL 300 S +G + + L Sbjct: 796 SFDDLGTQIAAVYKDL 811 >gi|241554587|ref|XP_002399517.1| succinyl-CoA synthetase, alpha subunit, putative [Ixodes scapularis] gi|215501704|gb|EEC11198.1| succinyl-CoA synthetase, alpha subunit, putative [Ixodes scapularis] Length = 217 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 129/213 (60%), Positives = 170/213 (79%), Gaps = 1/213 (0%) Query: 88 IESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSRLIGPNCPGILTPDSCKIGIMPGS 146 +E++EAE+PL+VCITEGIP DMVRVK +L ++S +RL+GPNCPGI+ P+ CKIGIMPG Sbjct: 1 MEAVEAEVPLVVCITEGIPQQDMVRVKNQLMQQSKTRLVGPNCPGIIKPEECKIGIMPGH 60 Query: 147 IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 I +KG +GI+SRSGTLTYEAV QT+Q GLGQS VGIGGDP GT FID L++FL D T Sbjct: 61 IHQKGKIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTNFIDCLDIFLHDPET 120 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKG 266 + I+++GEIGG+AEE AA+FL+ KP+V F+AG TAPPGR MGHAGA+I+GGKG Sbjct: 121 KGIILIGEIGGNAEESAAEFLEKHNSGTSAKPVVSFIAGLTAPPGRRMGHAGAIIAGGKG 180 Query: 267 GAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GA++KI A+K AG+ + SPA++G ++++ + Sbjct: 181 GAKEKIEALKAAGVTVTKSPAQMGAAMLQEMQK 213 >gi|222087987|gb|ACM41856.1| succinate-CoA ligase GDP-forming alpha subunit [Epinephelus coioides] Length = 237 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 140/231 (60%), Positives = 177/231 (76%), Gaps = 1/231 (0%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSRLIGPN 128 IYVPP A AIIE+I+AEIPL+VCITEGIP DMVRVK +L +S++RLIGPN Sbjct: 3 GDATCCIYVPPPFAAAAIIEAIDAEIPLVVCITEGIPQQDMVRVKHKLLRQSATRLIGPN 62 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 CPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS VGIGGDP Sbjct: 63 CPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPF 122 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 GT FID LE+FL D TE I+++GEIGG+AEE AA++LK + KP+V F+AG TA Sbjct: 123 NGTNFIDCLEVFLQDPKTEGIILIGEIGGNAEENAAEYLKQHNSGAKAKPVVSFIAGLTA 182 Query: 249 PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 PPGR MGHAGA+I+GGKGGA++KI A++ AG+ ++ SPA++G ++ + Sbjct: 183 PPGRRMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGSTIFKEFEK 233 >gi|189346748|ref|YP_001943277.1| ATP-citrate lyase/succinyl-CoA ligase [Chlorobium limicola DSM 245] gi|189340895|gb|ACD90298.1| ATP-citrate lyase/succinyl-CoA ligase [Chlorobium limicola DSM 245] Length = 610 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 101/318 (31%), Positives = 175/318 (55%), Gaps = 18/318 (5%) Query: 1 MSILVDKNTKV-LVQGLTGKAGTFHTEQA--ILYCQTQVVGGIHPKKGST----YWTGGN 53 MSIL +++T+V ++ G+ G Q ++ V ++P + Y G Sbjct: 1 MSILANRDTQVVIIGGVAGLNAARRMAQFDFLINRPLSVQAFVYPPEEGQQKEIYRGGEL 60 Query: 54 VNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMV 111 NVPV++++ +A E N ++IY+ + A A E++EA I L+ ITEG+P D Sbjct: 61 KNVPVYSSLEDALAENPGINTALIYIGANRAYQAAKEALEASSIKLVSMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGTLT 163 R++ ++ GP+ GI++ C++G++ G +++R GS G++++SG L+ Sbjct: 121 RLRKLAIEAGKLFNGPSSIGIMSAGECRLGVIGGEFKNLKLCNLYRSGSFGVITKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 EA++ +Q G G +TAV IGGD GT+F+ LE+F D T+++V+VGE+GG+ E+EA Sbjct: 181 NEAMWLCAQNGNGITTAVAIGGDAYPGTDFVTYLEMFEKDPETKAVVIVGEVGGTLEDEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS-GGKGGAEDKINAMKEAGICI 282 A++L E +R R +G + P G GHAGA G G A K+NA+++AG + Sbjct: 241 AEWLAAEKRRIRLVATIGGTCQEVLPQGMKFGHAGAKEGKKGVGSARAKMNALRDAGALV 300 Query: 283 APSPARIGRSLVELLGSL 300 + + + + ++ L Sbjct: 301 PDTFGGLSKCIKQVYEEL 318 >gi|145219674|ref|YP_001130383.1| ATP citrate lyase subunit 2 [Prosthecochloris vibrioformis DSM 265] gi|145205838|gb|ABP36881.1| ATP citrate lyase subunit 2 [Chlorobium phaeovibrioides DSM 265] Length = 610 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 105/318 (33%), Positives = 172/318 (54%), Gaps = 18/318 (5%) Query: 1 MSILVDKNTKV-LVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGST----YWTGGN 53 MSIL +K+T V ++ G+ G Q V ++P + Y G Sbjct: 1 MSILANKDTNVVIIGGVAGVNAAKRMAQFDFLVNRSLSVQAFVYPPESGQQKEIYRGGEL 60 Query: 54 VNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMV 111 N+ V+ ++ EA +E N ++IY+ S A + +E +E+E I L+ ITEG+P D Sbjct: 61 NNISVYASLKEALQENPQINTALIYLGASRAAQSAVECLESENIKLVSMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGTLT 163 +++A K GP+ GI++ C++G++ G +++R GS G+L++SG L+ Sbjct: 121 KLRAMAIKKGKMFNGPSSIGIMSAGECRLGVIGGEFKNLKLCNLYRAGSFGVLTKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E ++ +Q G G ++AV IGGD GT+F+ LE+F D T+++VMVGE+GG+ EEEA Sbjct: 181 NETMWLCAQNGNGVTSAVAIGGDSYPGTDFVTYLEMFEKDPETKAVVMVGEVGGTLEEEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS-GGKGGAEDKINAMKEAGICI 282 A++L E +R R +G + P G GHAGA G G A KINA++EAG + Sbjct: 241 AEWLGAEKRRIRLIAAIGGTCQEVLPQGMKFGHAGAKEGKKGLGSARSKINALREAGALV 300 Query: 283 APSPARIGRSLVELLGSL 300 + + +++ ++ L Sbjct: 301 PDTFGGLSKAIKQVYEEL 318 >gi|114055003|gb|ABI50080.1| ATP citrate lyase alpha subunit [Desulfurobacterium thermolithotrophum] Length = 546 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 21/316 (6%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQT-QVVGGIHPKKG----STYWTGGNVNVP 57 +L D+NTK + L A + +T +V + P + ++ + +P Sbjct: 7 VLFDRNTKAIFWNLNRNAIQRMLDYDYTVGRTPSIVAIVAPTQNRKFEKFFFGTQEIMIP 66 Query: 58 VF-TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMVRVKA 115 ++ +TV A++ A+ V + A + IE++ I + EGIP + Sbjct: 67 IYKSTVEAAEKHPEADVLVNFASFRTAYNVTIEALNIPTIRTVAITAEGIPERLARDMAY 126 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + + +IGP G + + +IG I+ + R GS G+++RSG L E Sbjct: 127 KAKLLGKWIIGPATVGGIAAGAFRIGNAGGTIENIVKSKLHRPGSCGLVTRSGGLFNELS 186 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G + IGGD G++F+D L F + + ++M+GE+GG E + A+ + Sbjct: 187 NIIARNADGIVEGIAIGGDRFPGSDFLDHLIRFQKNPQVKYMIMLGEVGGELEYKVAEAI 246 Query: 228 KDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K KP++ + G A GHAGA + A+ K A+KEAG + Sbjct: 247 KSGLI---TKPVIAWCIGTIAKHFGGEVQFGHAGAKAGADRETADAKNRALKEAGAIVPD 303 Query: 285 SPARIGRSLVELLGSL 300 S + E+ L Sbjct: 304 SFNDFPEVIREVYEDL 319 >gi|319789996|ref|YP_004151629.1| ATP-citrate lyase/succinyl-CoA ligase [Thermovibrio ammonificans HB-1] gi|317114498|gb|ADU96988.1| ATP-citrate lyase/succinyl-CoA ligase [Thermovibrio ammonificans HB-1] Length = 616 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 136/316 (43%), Gaps = 21/316 (6%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ-TQVVGGIHP----KKGSTYWTGGNVNVP 57 +L D++TK + L A + L + +V + P K ++ + +P Sbjct: 7 LLFDRDTKAIFWNLNRNAIQRMLDYDYLVGRSPSIVAIVAPTQSRKFDKFFYGTEEIMIP 66 Query: 58 VFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMVRVKA 115 ++ + EA E A+ V + A D E++ I I EGIP + A Sbjct: 67 IYRSTTEAAEAHPEADVLVNFASFRTAYDVAREALNIPTIRTIAITAEGIPERLARDMAA 126 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 R ++ +IGP G + + +IG I+ + R GS G+++RSG L E Sbjct: 127 RAKQEGKWIIGPATVGGIAAGAFRIGNAGGTLENIVKSKLHRPGSCGLVTRSGGLFNELS 186 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G + IGGD G++F+D L F + A + +VM+GE+GG E + L Sbjct: 187 NIIARNADGIVEGIAIGGDRFPGSDFLDHLLRFQKNPAVKYMVMLGEVGGELEYMVVEAL 246 Query: 228 KDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 + K KP++ + G A GHAGA + A+ K A++EAG + Sbjct: 247 E---KGLITKPLIAWCIGTIAKHFGGEVQFGHAGAKAGADRETADAKNRALREAGALVPE 303 Query: 285 SPARIGRSLVELLGSL 300 S I + ++ L Sbjct: 304 SFNDIPDLIRKVYEDL 319 >gi|18204829|gb|AAH21502.1| Acly protein [Mus musculus] Length = 592 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 20/291 (6%) Query: 27 QAILYCQTQVVGGIHPK----KGSTYWTGGNVNVPVFTTVAEAKERTA-ANASVIYVPPS 81 + V ++P K YW + +PVF +A+A ++ + + + Sbjct: 8 YVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIPVFKNMADAMKKHPEVDVLINFASLR 67 Query: 82 GAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKI 140 A D+ +E++ A+I I I EGIP ++ + ++ +IGP G + P KI Sbjct: 68 SAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGVTIIGPATVGGIKPGCFKI 127 Query: 141 G--------IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 G I+ ++R GSV +SRSG ++ E S+ G V IGGD G+ Sbjct: 128 GNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGST 187 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG- 251 F+D + + + IV++GEIGG+ E + + +K+ KP+V + G A Sbjct: 188 FMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGIKEGR---LTKPVVCWCIGTCATMFS 244 Query: 252 --RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GHAGA + A K A+KEAG+ + S +G + + L Sbjct: 245 SEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELGEIIQSVYEDL 295 >gi|34558783|gb|AAQ75128.1| citrate lyase subunit 2 [Alvinella pompejana epibiont 6C6] Length = 600 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 84/319 (26%), Positives = 132/319 (41%), Gaps = 22/319 (6%) Query: 1 MSILVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNV 54 M L KNT+ + T + I + V G + P K +W + Sbjct: 1 MERLFTKNTQAIFWNNNKTAIQRMLDYDYVIKRDKPSVAGIVAPTSSNKFEKFFWGADEI 60 Query: 55 NVPVF-TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMVR 112 VP++ T K + A+ + + A + E+++ +I+ EGIP Sbjct: 61 MVPIYRNTADAKKAQPQADVLLNFASFRTAYNVTNEALDIGGFRVIMITAEGIPERLARA 120 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTY 164 + + +IGP G + P + KI I+ + R GS G+++RSG L Sbjct: 121 MNQKARDLGVTVIGPATVGAIAPGAFKIANIGGTIQNIIKSKLHRAGSCGLVTRSGGLFN 180 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E S G + V IGGD G+ FID L + + +V++GE+GG E + Sbjct: 181 ELSNIISLNADGIAEGVAIGGDRFVGSTFIDNLLRMEKNPDVKYMVLLGEVGGIEEYKVI 240 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 + +K KPI+ + G A G GHAGA + AE K AM EAGI Sbjct: 241 EAVK---SGEITKPIIAWCIGTIAKYYDSGVQFGHAGASANSDMETAEAKNRAMAEAGIH 297 Query: 282 IAPSPARIGRSLVELLGSL 300 + S + ++ E+ SL Sbjct: 298 VPSSFNDLPATIKEVYESL 316 >gi|288817522|ref|YP_003431869.1| citryl-CoA synthetase small subunit [Hydrogenobacter thermophilus TK-6] gi|46849517|dbj|BAD17846.1| citryl-CoA synthetase small subunit [Hydrogenobacter thermophilus] gi|288786921|dbj|BAI68668.1| citryl-CoA synthetase small subunit [Hydrogenobacter thermophilus TK-6] gi|308751125|gb|ADO44608.1| CoA-binding domain protein [Hydrogenobacter thermophilus TK-6] Length = 344 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 103/307 (33%), Positives = 159/307 (51%), Gaps = 18/307 (5%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 ++ +T+++V G+TG+ + ++ VV G+ P KG + G VPV+ TV Sbjct: 11 YLNDSTRIIVMGITGREASQVVAESEALYPGFVVAGVTPGKGGSEVAG----VPVYNTVR 66 Query: 64 EAKERTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 EA+ER N ++YVPP+ DA+IE I+A I +I ITE +P+ D V ++ + Sbjct: 67 EAQERHPEINTGIVYVPPASVKDAVIELIDAGIGVIFIITEHVPIRDTVYFYHYAKERGT 126 Query: 123 RLIGPNCPGILTPD-SCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 ++GP G + P +IG + P + G + ILS+SG LT + G G Sbjct: 127 IIVGPTSLGCIIPKIPARIGAIGGKDPSVAYADGGLVILSKSGGLTTTTAEMFKRRGWGV 186 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK- 236 A+ +GGD + T F D +E D + +++ GE+GGS EE+AA+ + K GR Sbjct: 187 YMALALGGDVISCTTFADAIENLADDPNVKGVIIQGEVGGSYEEQAAETILRLWKEGRWN 246 Query: 237 KPIVGFVAGKTAPP--GRTMGHAGAVISGGKGGAEDKINAMKEAG-----ICIAPSPARI 289 KP+ FVAG+ G + GHAGA++ GKG A DKI A E G + +A + Sbjct: 247 KPVAAFVAGRFQESLEGVSFGHAGAIVERGKGKATDKIRAFNEVGKITGLVKVAEFYHDL 306 Query: 290 GRSLVEL 296 + EL Sbjct: 307 VHCIEEL 313 >gi|219118523|ref|XP_002180032.1| atp-citrate synthase [Phaeodactylum tricornutum CCAP 1055/1] gi|217408289|gb|EEC48223.1| atp-citrate synthase [Phaeodactylum tricornutum CCAP 1055/1] Length = 1082 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 82/312 (26%), Positives = 129/312 (41%), Gaps = 23/312 (7%) Query: 9 TKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPVFTTV 62 T+ +V G+ + G + + V I P YW + +PV+ T+ Sbjct: 482 TRCVVYGMQHRAVQGMLDFDFMCKRKKPSVAAMIFPFSANHFVKFYWGTDEIMMPVYQTM 541 Query: 63 AEA-KERTAANASVIYVPPSGAGDAIIESIEA--EIPLIVCITEGIPVLDMVRVKARLEK 119 EA K+ V + +++E + +I I I EG+P + +K Sbjct: 542 EEAFKKHAEVTVVVNFASFRSVYSSVLEMLNFSEQIKTIAIIAEGVPESQTRAINIAAQK 601 Query: 120 SSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + +IGP G + P +IG I+ ++R GSV +S+SG L+ E Sbjct: 602 LNVGIIGPATVGGIKPGCFRIGNTGGMLDNIVMSKLYRPGSVAYVSKSGGLSNELNNLIC 661 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + G V IGGD G+ F+D L + + +V++GE+GG E E LK Sbjct: 662 RNSDGVYEGVAIGGDRYPGSRFMDHLLRYNDNPHVHILVLLGEVGGVDEYEICGALKSGR 721 Query: 232 KRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 KP+V + G A P GHAGA+ G A K A+KEAG + + Sbjct: 722 IS---KPLVAWCIGTCASIFPFEVQFGHAGALARGDMETARAKNKALKEAGAHVPENFFE 778 Query: 289 IGRSLVELLGSL 300 G + E+ L Sbjct: 779 FGDVIHEVFEFL 790 >gi|302036205|ref|YP_003796527.1| ATP citrate lyase subunit alpha [Candidatus Nitrospira defluvii] gi|300604269|emb|CBK40601.1| ATP citrate lyase, alpha subunit [Candidatus Nitrospira defluvii] Length = 606 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 97/318 (30%), Positives = 170/318 (53%), Gaps = 18/318 (5%) Query: 1 MSILVDKNTKVLVQGLTG--KAGTFHTEQAILYCQT-QVVGGIHPKKGSTY----WTGGN 53 MSIL +K+T+V++QG A E L + V ++P + G Sbjct: 1 MSILANKDTRVVIQGGQAGVNAARRMAEFCYLIKRPLNVEAFVYPPDAGKSNEIPYGSGL 60 Query: 54 VNVPVFTTVAEAKERTAA-NASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMV 111 + +PV+ ++AEA + N S++Y+ A +E+++ + I ++ ITEG+P D Sbjct: 61 IAIPVYKSIAEATKHHPTLNTSLVYIGADRAMKGGMEALDDSHIKVVSMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGTLT 163 + A K GP+ GI++ +C++G++ G ++R+GS G++++SG L+ Sbjct: 121 ILGAHARKLGKVFNGPSSIGIISAGACRLGVIGGAFDNLVLSKLYREGSFGVITKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E ++ SQ G +TA+GIGGD GT+++ LE+F D T+++V+VGE+GG EE A Sbjct: 181 NEIIWICSQFADGITTAIGIGGDAYPGTDYVSYLEMFENDPQTKAVVIVGEMGGDLEERA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS-GGKGGAEDKINAMKEAGICI 282 A++ + +R + +V ++ P G GHAGA G+G A K +A+K+AG + Sbjct: 241 AEWYGAKKRRVKLIAVVSGFCQESLPKGMKFGHAGAKEGMKGEGSARSKSDALKKAGALV 300 Query: 283 APSPARIGRSLVELLGSL 300 P+ +G ++ E L Sbjct: 301 PPTFGALGPAIKETYQDL 318 >gi|332028433|gb|EGI68476.1| ATP-citrate synthase [Acromyrmex echinatior] Length = 1088 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L TK ++ G+ + + + V ++P K YW V +P Sbjct: 480 LFSNKTKSIIWGMQTRAVQSMLDFDFVCRRSEPSVAAIVYPFTGDHKQKFYWGHKEVLIP 539 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ + +A + A+ V + A ++ +E+++ +I I I EGIP ++ Sbjct: 540 VYKQMKDAMAKHMDADVMVTFASLRSAYESTMETLQFPQIRTIAIIAEGIPENMTRKMIL 599 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 600 AAQRRNVTIIGPATVGGVKPGCFKIGNTGGMMDNILHSKLYRPGSVAYVSRSGGMSNELN 659 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD GT F+D + + D + IV++GE+GG E E + L Sbjct: 660 NIISKASNGVLEGVAIGGDRYPGTTFMDHIMRYQNDPDVKLIVLLGEVGGIEEYEVCEAL 719 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K KP++ + G A GHAG++ + A K A+K A + Sbjct: 720 KAGRI---TKPLIAWCIGTCASMFNSEVQFGHAGSIANSNLETASAKNAALKAANAYVPN 776 Query: 285 SPARIGRSLVELLGSL 300 S +G + + L Sbjct: 777 SFDNLGDLIQTVYEQL 792 >gi|326497339|dbj|BAK02254.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1102 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 130/317 (41%), Gaps = 23/317 (7%) Query: 4 LVDKNTKVLVQGLT--GKAGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVP 57 + T+ +V GL + V ++P G YW + VP Sbjct: 492 IFSSTTRSIVYGLQIEAVQNMLDFDYICERKTPSVACMVYPFSGNHFQKFYWNTKEILVP 551 Query: 58 VFTTVAE-AKERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKA 115 ++ + E K+ ++ V + ++ ++ + ++ I I EG+P + Sbjct: 552 IYQHLDEAIKKNPDVDSVVNFASSRSVYESTLDLLKHPQLRTIAIIAEGVPERYTRDIIR 611 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 R + +IGP G + P ++G I+ ++R GSV ++RSG ++ E Sbjct: 612 RANATGVMIIGPATVGGIKPGCFRVGNTGGMLDNILSSKLYRPGSVAYVARSGGMSNELN 671 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD G+ FID + + D + IV++GE+GG E + + Sbjct: 672 NIVSRNTDGVYEGVAIGGDMYPGSTFIDHMLRYEQDPDVKMIVLLGEVGGVEEYRVCEAI 731 Query: 228 KDEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGK-GGAEDKINAMKEAGICIA 283 K + KP+V + G A P GHAGA +G A+ K A+K AG + Sbjct: 732 KSKRI---TKPVVAWCIGTCAKMFPYEVQFGHAGACAAGKDITTADAKNRALKLAGCVVP 788 Query: 284 PSPARIGRSLVELLGSL 300 S G ++ L Sbjct: 789 DSFNHFGMAIKNTYKKL 805 >gi|221041494|dbj|BAH12424.1| unnamed protein product [Homo sapiens] Length = 248 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 116/183 (63%), Positives = 137/183 (74%), Gaps = 6/183 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK +L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q GLGQS V Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCV 224 Query: 182 GIG 184 G G Sbjct: 225 GEG 227 >gi|289547974|ref|YP_003472962.1| succinate--CoA ligase (ADP-forming) [Thermocrinis albus DSM 14484] gi|289181591|gb|ADC88835.1| Succinate--CoA ligase (ADP-forming) [Thermocrinis albus DSM 14484] Length = 341 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 103/309 (33%), Positives = 157/309 (50%), Gaps = 18/309 (5%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ T++LV G+TG+ + ++ VV G+ P KG + G PV+ T Sbjct: 4 TVYLNDQTRILVMGITGREASQVVTESEALYPGFVVAGVTPGKGGSQVAGK----PVYNT 59 Query: 62 VAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 V EA + N ++YVPP+ DA+IE ++A I LI ITE +P+ D V ++ Sbjct: 60 VREALQNHPEINTGLVYVPPTSVKDAVIELVDAGIKLIYIITEHVPIRDTVYFYHYAKER 119 Query: 121 SSRLIGPNCPGILTPD-SCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 ++GP G + P +IG + P + G + ILS+SG LT + G Sbjct: 120 GVIIVGPTSLGCIVPRIPARIGAIGGKDPSIAYADGGLVILSKSGGLTTTTAEMFKRRGW 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G A+ +GGD + T F DVLE D + +++ GE+GGS EE+AAQ + K G+ Sbjct: 180 GVYMALALGGDVISCTTFADVLEKIADDPNVKGVIIQGEVGGSYEEQAAQTILRLYKEGK 239 Query: 236 K-KPIVGFVAGKTAP--PGRTMGHAGAVISGGKGGAEDKINAMKEAG-----ICIAPSPA 287 KP+ FVAG+ G + GHAGA++ GKG A DKI A E G + +A Sbjct: 240 WNKPVAAFVAGRFQEKLEGVSFGHAGAIVERGKGKATDKIRAFNEVGKETGLVMVAEFYH 299 Query: 288 RIGRSLVEL 296 + + EL Sbjct: 300 DLVHCIEEL 308 >gi|114055027|gb|ABI50083.1| ATP citrate lyase alpha subunit [Thermovibrio ruber] Length = 546 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 77/313 (24%), Positives = 126/313 (40%), Gaps = 15/313 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ-TQVVGGIHPKKG----STYWTGGNVNVP 57 IL D+NTK + L A + L + +V + P + ++ + +P Sbjct: 7 ILFDRNTKAIFWNLNRNAIQRMLDYDYLVGRSPSIVAIVAPTQNRKFEKFFYGTEEIMIP 66 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 ++ + EA E A+ V + A D E++ I I EGIP + A Sbjct: 67 IYRSTTEAAEAHPDADVLVNFASFRTAYDVTREALNLPTIRTIAITAEGIPERLARDMAA 126 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 R + +IGP G + + +IG I+ + R GS G+++RSG L E Sbjct: 127 RAKAEGKWIIGPATVGGIAAGAFRIGNAGGTLENIVKSKLHRPGSCGLVTRSGGLFNELS 186 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G + IGGD G++F+D L F + A + ++M+GE+GG E + L Sbjct: 187 NIIARNADGIVEGIAIGGDRFPGSDFLDHLLRFQKNPAVKYMIMLGEVGGELEYRVVEAL 246 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 + K GHAGA + A+ K A+KEAG + S Sbjct: 247 EKGLITKPLIAWCIGTIAKHFGGEVQFGHAGAKAGADRETADAKNRALKEAGAIVPDSFN 306 Query: 288 RIGRSLVELLGSL 300 + + L Sbjct: 307 DFPEVIRSVYEEL 319 >gi|189500292|ref|YP_001959762.1| ATP-citrate lyase/succinyl-CoA ligase [Chlorobium phaeobacteroides BS1] gi|189495733|gb|ACE04281.1| ATP-citrate lyase/succinyl-CoA ligase [Chlorobium phaeobacteroides BS1] Length = 610 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 101/318 (31%), Positives = 175/318 (55%), Gaps = 18/318 (5%) Query: 1 MSILVDKNTK-VLVQGLTG-KAGTFHTEQAILYCQT-QVVGGIHPKKGST----YWTGGN 53 MSI+++K T+ V++ G G A E L + V ++P + + G Sbjct: 1 MSIVINKETRAVIIGGAAGLSAARKMAEFDFLVKRPLTVQAFVYPPEEGQQKEIFLGGEL 60 Query: 54 VNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMV 111 NV V++T+ +A + N +++Y+ S A A E++E+E I L+ ITEG+P D Sbjct: 61 KNVKVYSTLQKALADNPQINTALVYLGASRATQATQEALESEHISLVSVITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI--------FRKGSVGILSRSGTLT 163 +++ E + L GP+ GI++ C++G++ G +R GS G+L++SG L+ Sbjct: 121 KLRLLAENNGKVLNGPSSIGIMSAGECRLGVIGGEYKNLKLCNLYRPGSFGVLTKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 EA++ +Q G G ++AV +GGD GT+F+ LE+F D T+++V++GE+GGS EE+A Sbjct: 181 NEAMWLCAQNGDGITSAVAVGGDAYPGTDFVTYLEMFENDPDTKAVVIIGEVGGSLEEDA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS-GGKGGAEDKINAMKEAGICI 282 A++L E +R R +G + P G GHAGA G G A K+NA+++AG + Sbjct: 241 AEWLAAEKRRIRVVAAIGGTCQEVLPQGMKFGHAGAKEGKKGAGSARSKMNALRDAGAVV 300 Query: 283 APSPARIGRSLVELLGSL 300 + + +++ ++ L Sbjct: 301 PDTFGGLSKAIKQVYDEL 318 >gi|194333912|ref|YP_002015772.1| ATP-citrate lyase/succinyl-CoA ligase [Prosthecochloris aestuarii DSM 271] gi|194311730|gb|ACF46125.1| ATP-citrate lyase/succinyl-CoA ligase [Prosthecochloris aestuarii DSM 271] Length = 610 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 104/318 (32%), Positives = 176/318 (55%), Gaps = 18/318 (5%) Query: 1 MSILVDKNTK-VLVQGLTG-KAGTFHTEQAILYCQT-QVVGGIHPKKGST----YWTGGN 53 MSI+++K T+ V++ G G A E L + V ++P + + G Sbjct: 1 MSIVINKETRAVIIGGAAGLSAAKKMAEFDFLVKRPLTVQAFVYPPEEGQQKEIFLGGEL 60 Query: 54 VNVPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMV 111 NV V++ + +A E N ++IY+ S A A +E++E+ I L+ ITEG+P D Sbjct: 61 KNVKVYSALEKALEENPQINTALIYLGASRATQATMEALESKNIQLVSVITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGTLT 163 +++ EK L GP+ GI++ C++G++ G +++R GS G++++SG L+ Sbjct: 121 KLRIVAEKKGKTLNGPSSIGIMSAGQCRLGVIGGEFKNLKLCNLYRPGSFGVITKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 EA++ +Q G G ++AV IGGD GT+F++ LE+F D T+++VM+GE+GG+ EEEA Sbjct: 181 NEAMWLCAQNGNGITSAVAIGGDAYPGTDFVNYLEMFDKDPETKAVVMIGEVGGTLEEEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS-GGKGGAEDKINAMKEAGICI 282 A++L E + R +G + P G GHAGA G G A KINA++EAG + Sbjct: 241 AEWLGKEPRSIRLIAAIGGTCQEVLPQGMKFGHAGAKEGKKGTGSARSKINALREAGAIV 300 Query: 283 APSPARIGRSLVELLGSL 300 + + +++ ++ L Sbjct: 301 PDTFGGLSKAIKQVYEEL 318 >gi|78186924|ref|YP_374967.1| citrate lyase, subunit 2 [Chlorobium luteolum DSM 273] gi|78166826|gb|ABB23924.1| ATP citrate lyase subunit 2 [Chlorobium luteolum DSM 273] Length = 610 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 102/318 (32%), Positives = 170/318 (53%), Gaps = 18/318 (5%) Query: 1 MSILVDKNTKV-LVQGLTGKAGTFHTEQA--ILYCQTQVVGGIHPKKGST----YWTGGN 53 MSI+ +K+T+V ++ G+ G Q ++ V ++P + Y G Sbjct: 1 MSIIANKDTRVVIIGGVAGVNAAKRMAQFDFLINRPLSVQAFVYPPEKGQQKEIYRGGEL 60 Query: 54 VNVPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMV 111 N+ V+ T+ EA E N ++IY+ S A + E +E+ I L+ ITEG+P D Sbjct: 61 NNISVYATLQEALEENPQINTALIYLGASRAAQSARECLESKNIQLVSMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI--------FRKGSVGILSRSGTLT 163 +++A KS GP+ GI++ C++G++ G +R GS G+L++SG L+ Sbjct: 121 KLRAMAIKSGKMFNGPSSIGIMSAGECRLGVIGGEYKNLKLCNLYRAGSFGVLTKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E ++ +Q G G ++AV IGGD GT+F+ LE+F D T+++VMVGE+GG+ EEEA Sbjct: 181 NETMWLCAQNGNGITSAVAIGGDSYPGTDFVTYLEMFENDPETKAVVMVGEVGGTLEEEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS-GGKGGAEDKINAMKEAGICI 282 A++ + +R R +G + P G GHAGA G G A KIN+++EAG + Sbjct: 241 AEWFGAKKRRIRLIAAIGGTCQEVLPQGMKFGHAGAKEGKKGLGSARSKINSLREAGALV 300 Query: 283 APSPARIGRSLVELLGSL 300 + + +++ ++ L Sbjct: 301 PDTFGGLSKAIKQVYQEL 318 >gi|169607547|ref|XP_001797193.1| hypothetical protein SNOG_06832 [Phaeosphaeria nodorum SN15] gi|160701438|gb|EAT85483.2| hypothetical protein SNOG_06832 [Phaeosphaeria nodorum SN15] Length = 656 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 82/305 (26%), Positives = 128/305 (41%), Gaps = 22/305 (7%) Query: 15 GLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPVFTTVAEAKER 68 GL + G + Q V G I+ G YW +PV+ V +A + Sbjct: 46 GLQPRAVQGMLDFDFICKRKQPSVAGIIYTFGGQFVSKMYWGTSETLLPVYQDVGKAIAK 105 Query: 69 T-AANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + V + + +E +E +I I I EG+P + +K +IG Sbjct: 106 HADVDTVVNFASSRSVYQSTMELLEFPQIKSIAIIAEGVPERRAREILHVAQKKGVTIIG 165 Query: 127 PNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 P G + P + KIG I+ ++R GSV +S+SG ++ E + G Sbjct: 166 PATVGGIKPGAFKIGNTGGMMDNIVASKLYRPGSVSYVSKSGGMSNELNNIIANTTDGVL 225 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V IGGD GT FID + + AD + IV++GE+GG E + +K KP Sbjct: 226 EGVAIGGDRYPGTTFIDHVLRYQADPDCKIIVLLGEVGGVEEYRVIEAVK---SGQVNKP 282 Query: 239 IVGFVAGKTAPP---GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 IV + G A GHAG+ + A K N+M+EAGI + + + +L + Sbjct: 283 IVAWAIGTVAGMLKTEVQFGHAGSFANSQLETAVTKNNSMREAGIYVPETFEEMPGTLAQ 342 Query: 296 LLGSL 300 + L Sbjct: 343 VYQKL 347 >gi|238060994|ref|ZP_04605703.1| succinyl-CoA synthetase, alpha subunit [Micromonospora sp. ATCC 39149] gi|237882805|gb|EEP71633.1| succinyl-CoA synthetase, alpha subunit [Micromonospora sp. ATCC 39149] Length = 202 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 94/205 (45%), Positives = 130/205 (63%), Gaps = 5/205 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I + K++KV+VQG+TG G+ HT + +L T VVGG +P+K +PVF Sbjct: 1 MAIWLTKDSKVIVQGMTGSEGSKHTRR-MLAAGTNVVGGTNPRKAGQSVDFDGTALPVFA 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 TVA+A T A+ +VI+VPP A+IE+I+AEIPL V ITEG+PV D A + Sbjct: 60 TVADAMAETGADVTVIFVPPQFTKAAVIEAIDAEIPLAVVITEGVPVHDTAAFWAYNVAK 119 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +R+IGPNCPGI +P + GI+P I G +G++S+SGTLTY+ +++ +G S Sbjct: 120 GERTRIIGPNCPGIASPGASNAGIIPADITGSGRIGLVSKSGTLTYQMMYELRD--IGFS 177 Query: 179 TAVGIGGDPVKGTEFIDVLELFLAD 203 T VGIGGDP+ GT ID L F AD Sbjct: 178 TCVGIGGDPIIGTTHIDALAAFEAD 202 >gi|332260732|ref|XP_003279435.1| PREDICTED: ATP-citrate synthase [Nomascus leucogenys] Length = 1095 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 80/328 (24%), Positives = 134/328 (40%), Gaps = 32/328 (9%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PVF +A+A + + + + A D+ +E++ ++I I I EGIP ++ Sbjct: 550 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYSQIRTIAIIAEGIPEALTRKL 609 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 610 IKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 669 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGT-------EFIDVLELFLADEATESIV---MVGEI 215 S+ G V IGGD ++ E + GEI Sbjct: 670 LNNIISRTTDGVYEGVAIGGDRPAEMLLKSKQWGITALVSGLTEHEIGKHRTGQQRAGEI 729 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKI 272 GG+ E + + +K+ KPIV + G A GHAGA + A K Sbjct: 730 GGTEEYKICRGIKEGR---LTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKN 786 Query: 273 NAMKEAGICIAPSPARIGRSLVELLGSL 300 A+KEAG+ + S +G + + L Sbjct: 787 QALKEAGVFVPRSFDELGEIIQSVYEDL 814 >gi|46139941|ref|XP_391661.1| hypothetical protein FG11485.1 [Gibberella zeae PH-1] Length = 320 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 134/299 (44%), Positives = 183/299 (61%), Gaps = 22/299 (7%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +++V++ T+V+ QG TGK T + AI Y T +VGG+ PKKG T N+++PVF T Sbjct: 42 NLMVNETTRVIYQGFTGKTATNNARDAIAY-GTNIVGGVSPKKGGTT----NLDLPVFAT 96 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V A + NAS+++VP S A AI E+IEAEIPLIV I E IPV DM+RV L +S Sbjct: 97 VRGAAQSVRPNASLVHVPASFAAGAIEEAIEAEIPLIVAIVEHIPVHDMLRVHEILRTQS 156 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRL GPN PGIL P C+IGI+P G VGI+SRSGT+ YEA+ T + G QS Sbjct: 157 KSRLKGPNTPGILAPGKCRIGIIPADQCAPGKVGIISRSGTMIYEAIGATMRAGQVQSLV 216 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKPI 239 +G+GGD + GT + LE+ L D ATE+I+++GEIGGSAE EAA+ LK + G KP+ Sbjct: 217 LGLGGDSMPGTTMKEALEVLLHDSATETIILIGEIGGSAEVEAAELLKSFRAENGMFKPV 276 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + ++G+TAPPGR MGHA ++++G + P + L + Sbjct: 277 ISIISGRTAPPGRAMGHA---------------RVLQDSGARVLDHPGLLENELRAIFS 320 >gi|269986530|gb|EEZ92814.1| ATP-citrate lyase/succinyl-CoA ligase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 213 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 103/217 (47%), Positives = 145/217 (66%), Gaps = 4/217 (1%) Query: 82 GAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG 141 D++IE+I+A I LI ITE +P DM+++ + ++IGPNCPG+ P K+G Sbjct: 1 MTRDSVIEAIDAGIKLITIITEHVPFQDMLKINEYAKLKDVKIIGPNCPGLAAPGIGKLG 60 Query: 142 IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFL 201 I+P +I +KG VG++SRSGTLTYE V ++ GLG+ST +GIGGD V G FIDVL+LF Sbjct: 61 IIPNTILKKGVVGVISRSGTLTYEIVNVITETGLGESTVLGIGGDKVPGLNFIDVLKLFN 120 Query: 202 ADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVI 261 D+ T IV+VGEIGG+ EE+AA F++ KKP+ F+ G APPG+ MGHAGA+I Sbjct: 121 EDKQTRGIVIVGEIGGNEEEKAADFIRKNV----KKPVFAFIDGVYAPPGKRMGHAGAII 176 Query: 262 SGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 SG G A+ K+ A K+A + +A + + +V+ LG Sbjct: 177 SGKTGTAKSKLAAFKKANVPVAKTFDELSSLMVKKLG 213 >gi|291236627|ref|XP_002738240.1| PREDICTED: succinate-CoA ligase, GDP-forming, alpha subunit-like [Saccoglossus kowalevskii] Length = 204 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 112/182 (61%), Positives = 137/182 (75%), Gaps = 6/182 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + KNTKV+ QGLTGK GTFHTEQAI Y T +VGG+ P KG G +PVF++ Sbjct: 27 NMRLTKNTKVICQGLTGKQGTFHTEQAIEY-GTNMVGGVSPGKGGKTHLG----LPVFSS 81 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 V EAKE T A+A+V+YVPP A DAI+E+I+AEI LIV ITEGIP DMVRVK +L ++ Sbjct: 82 VQEAKEATGADATVVYVPPPFAADAILEAIDAEIGLIVVITEGIPQQDMVRVKHKLIRQN 141 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 SRLIGPNCPGI+ P CK+GIMPG I + G +GI+SRSGTLTYEAV QT+ GLGQS Sbjct: 142 KSRLIGPNCPGIIKPGICKMGIMPGHIHQDGKIGIVSRSGTLTYEAVAQTTAVGLGQSLC 201 Query: 181 VG 182 +G Sbjct: 202 IG 203 >gi|163782521|ref|ZP_02177518.1| succinyl-CoA ligase alpha subunit [Hydrogenivirga sp. 128-5-R1-1] gi|159882094|gb|EDP75601.1| succinyl-CoA ligase alpha subunit [Hydrogenivirga sp. 128-5-R1-1] Length = 347 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 105/310 (33%), Positives = 156/310 (50%), Gaps = 22/310 (7%) Query: 4 LVDKNTKVLVQGLTGKAG-TFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 ++ T+V+V G+TG+ +E LY T VG + P KG +G VPVF TV Sbjct: 11 YLNDKTRVIVIGITGREASQVVSETEALYPGTIKVG-VTPGKGGQEVSG----VPVFNTV 65 Query: 63 AEAKERT---AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 EA N +IYVPP+ DA+IE ++A I +I ITE +P+ D V ++ Sbjct: 66 KEALNSPEGRDVNTGLIYVPPASVKDAVIELVDAGISVIYIITEHVPIRDTVYFYHYAKE 125 Query: 120 SSSRLIGPNCPGILTPD-SCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 ++GP G + P +IG + P +R G + ILS+SG LT + G Sbjct: 126 RGVTIVGPTSLGCIVPRVPARIGAIGGKNPSIAYRDGGLVILSKSGGLTTTTAEMFMRRG 185 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 G A+ +GGD + T F DVLE D + +++ GE+GG+ EE+AA+ ++ K G Sbjct: 186 WGVYMALALGGDIIACTTFADVLEEIKDDPNVKGVIIQGEVGGTYEEQAAETIRRLYKEG 245 Query: 235 RK-KPIVGFVAGKTAPP--GRTMGHAGAVISGGKGGAEDKINAMKEAG-----ICIAPSP 286 + P+ FVAG+ G + GHAGA++ GKG A DKI E G + +A Sbjct: 246 KWNIPVAAFVAGRFQEGLEGVSFGHAGAIVERGKGKATDKIRLFNEVGKETGLVKVAEFY 305 Query: 287 ARIGRSLVEL 296 + + EL Sbjct: 306 HDLVNCIEEL 315 >gi|237756014|ref|ZP_04584597.1| ATP-citrate synthase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691830|gb|EEP60855.1| ATP-citrate synthase [Sulfurihydrogenibium yellowstonense SS-5] Length = 616 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 71/313 (22%), Positives = 132/313 (42%), Gaps = 15/313 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ-TQVVGGIHPKKG----STYWTGGNVNVP 57 +L DKNTK + L A + + + + + P ++ + +P Sbjct: 7 LLFDKNTKAIFWNLNTSAIQRMLDYDYVVGRSPSIAAIVAPTSERSFEKFFYGTKEIIIP 66 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 ++ T +A + A+ + + A +E+ E +I IV EGIP ++ Sbjct: 67 IYKTTKDAAKFHPEADVLLNFASFRTAYPVTLEAFEIPQIRTIVITAEGIPERYARDMRI 126 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P + +I I+ + R GSVG+++RSG L E Sbjct: 127 KAKQLGKWIIGPATVGGIAPGAFRIANTGGTIENIIASKLHRPGSVGLVTRSGGLFNELS 186 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G + + IGGD G++F+D + F + + ++++GE+GG AE + + + Sbjct: 187 NIIARNADGVAEGIAIGGDRFPGSDFLDHMLRFEKNPQVKFMILLGEVGGEAEYKVVEAV 246 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 K+ K GHAGA + A+ K AMKE GI + + Sbjct: 247 KNGLITKPVIGWCIGTISKFFGGEVQFGHAGAKAGADRETADAKNRAMKEVGIHVPNNFN 306 Query: 288 RIGRSLVELLGSL 300 + + + L Sbjct: 307 ELPHVIKGIYEML 319 >gi|170583706|ref|XP_001896703.1| ATP-citrate synthase [Brugia malayi] gi|158596034|gb|EDP34450.1| ATP-citrate synthase, putative [Brugia malayi] Length = 628 Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 78/315 (24%), Positives = 127/315 (40%), Gaps = 39/315 (12%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + +TK +V G K G + Q VV +P K Y+ + VP Sbjct: 98 LFESDTKAIVWGQQVKAIQGMLDFDFVCGRSQPSVVASTYPFTGDHKQKYYFGQKEILVP 157 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 V+ ++ +A + + + + + E+++ Sbjct: 158 VYKSMKDAFNKHHDVSVFITFASLRSVYVTVREALD------------------FAQIRL 199 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 + LIGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 200 ANEKGVTLIGPATVGGIKPGCFKIGNTGGMMDNILSLKLYRPGSVAYVSRSGGMSNELNN 259 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 SQ G + IGGD G+ F+D L + D+ + +VM+GE+GG E + + LK Sbjct: 260 IISQNADGVYEGIAIGGDKYPGSTFVDHLLRYEMDDRVKMMVMLGELGGVEEYKVVEALK 319 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 ++ KP+V + G A GHAGA + A K A+KEAG + S Sbjct: 320 EKR---LTKPLVAWCIGTCADYVTFEIQFGHAGASANAKAETATAKNLALKEAGAHVPNS 376 Query: 286 PARIGRSLVELLGSL 300 +G + ++ L Sbjct: 377 FDDLGDEIAKIYKEL 391 >gi|78188768|ref|YP_379106.1| citrate lyase, subunit 2 [Chlorobium chlorochromatii CaD3] gi|78170967|gb|ABB28063.1| ATP citrate lyase subunit 2 [Chlorobium chlorochromatii CaD3] Length = 610 Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 100/318 (31%), Positives = 167/318 (52%), Gaps = 18/318 (5%) Query: 1 MSILVDKNTK-VLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGST----YWTGGN 53 MSI+ +++T+ V++ G+ G Q V ++P + Y G Sbjct: 1 MSIVANRDTRAVIIGGVAGVNAAKRMAQFDFLVNRPLTVQAFVYPPEEGQQKEIYRGGEL 60 Query: 54 VNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMV 111 NV V+ T+ +A E N ++IY+ S A A E + A I L+ ITEG+P D Sbjct: 61 NNVTVYATIEKALAENPEINTALIYLGASRATQAAKECLTASNIKLVTMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGTLT 163 ++ L GP+ GI++ C++G++ G +++R+GS G++++SG L+ Sbjct: 121 ILRKMANDQGKMLNGPSSIGIMSAGECRLGVIGGEFKNLKLCNLYRQGSFGVITKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E ++ +Q G G ++AV IGGD GT+F+ L++F D AT+++VMVGE+GG+ EEEA Sbjct: 181 NETMWLCAQNGDGVTSAVAIGGDAYPGTDFVTYLQMFENDPATKAVVMVGEVGGTLEEEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS-GGKGGAEDKINAMKEAGICI 282 A++ E +R R +G + P G GHAGA G G A KINA++E G + Sbjct: 241 AEWYGREKRRIRLIASIGGTCQEVLPQGMKFGHAGAKEGKKGLGSARSKINALREVGAVV 300 Query: 283 APSPARIGRSLVELLGSL 300 + + +++ ++ L Sbjct: 301 PDTFGGLSKAIKQVYEEL 318 >gi|188996977|ref|YP_001931228.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfurihydrogenibium sp. YO3AOP1] gi|188932044|gb|ACD66674.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfurihydrogenibium sp. YO3AOP1] Length = 616 Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 70/313 (22%), Positives = 132/313 (42%), Gaps = 15/313 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ-TQVVGGIHPKKG----STYWTGGNVNVP 57 +L DKNTK + L A + + + + + P ++ + +P Sbjct: 7 LLFDKNTKAIFWNLNTSAIQRMLDYDYVVGRSPSIAAIVAPTSERSFEKFFYGTKEIIIP 66 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 ++ + +A + A+ + + A +E+ E +I IV EGIP ++ Sbjct: 67 IYKSTKDAAKFHPEADVLLNFASFRTAYLVTLEAFEIPQIRTIVITAEGIPERYARDMRI 126 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P + +I I+ + R GSVG+++RSG L E Sbjct: 127 KAKQLGKWIIGPATVGGIVPGAFRIANTGGTIENIIASKLHRPGSVGLVTRSGGLFNELS 186 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G + + IGGD G++F+D + F + + ++++GE+GG AE + + + Sbjct: 187 NIIARNADGVAEGIAIGGDRFPGSDFLDHMLRFEKNPQVKFMILLGEVGGEAEYKVVEAV 246 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 K+ K GHAGA + A+ K AMKE GI + + Sbjct: 247 KNGLITKPVIGWCIGTISKFFGGEVQFGHAGAKAGTDRETADAKNRAMKEVGIHVPNNFN 306 Query: 288 RIGRSLVELLGSL 300 + + + L Sbjct: 307 ELPHVIKGIYEML 319 >gi|254410530|ref|ZP_05024309.1| CoA binding domain protein [Microcoleus chthonoplastes PCC 7420] gi|196182736|gb|EDX77721.1| CoA binding domain protein [Microcoleus chthonoplastes PCC 7420] Length = 291 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 93/297 (31%), Positives = 158/297 (53%), Gaps = 17/297 (5%) Query: 10 KVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT 69 K+LVQG+T G+++ + Y T +V G+ +G G +PVF V EA Sbjct: 2 KILVQGITQPIGSYYAARMKAY-GTNLVAGVSAGQGGQTLHG----IPVFDLVEEALSEV 56 Query: 70 A-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPN 128 +A+VI+ A DA +E+I+A + I+ +T GIP LDM+ + A+ + + ++GP+ Sbjct: 57 GYCDATVIFAESYSALDAALEAIDAGLSPIILVTGGIPPLDMIHLLAKAQARETLIVGPS 116 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 GI+ P +G + G++G++SR TLTYE +Q LGQS AV +G + + Sbjct: 117 SSGIIVPGKLLLGTQECEFYTPGTIGVISRVSTLTYEVALALTQAKLGQSIAVNLGSEAI 176 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 + F LE+ D+ TE+IV+V + GG +E+E A+F+ + KP++ +VAG+ Sbjct: 177 IASSFRQWLEILAQDKRTEAIVLVDQTGGDSEDETAEFIAQAIE----KPVIAYVAGQYT 232 Query: 249 PPGRTMGHAGAVISGGKG-------GAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 P + +G A+I+ A+ K+ A K+ I +A P++I + + L Sbjct: 233 PEDKQVGDTSAIIAAQLSGPIANTTTAQHKVAAFKQTNIPVAEYPSKIPDLVKKALK 289 >gi|319956331|ref|YP_004167594.1| ATP-citrate lyase/succinyl-CoA ligase [Nitratifractor salsuginis DSM 16511] gi|319418735|gb|ADV45845.1| ATP-citrate lyase/succinyl-CoA ligase [Nitratifractor salsuginis DSM 16511] Length = 605 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 78/320 (24%), Positives = 134/320 (41%), Gaps = 23/320 (7%) Query: 1 MSILVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNV 54 MS L ++T+ + + + I V + P K +W G + Sbjct: 1 MSRLFTRDTQAIFWNNNKSAIQRMLDYDYVIKRETPSVAAIVAPTSSAKFEKFFWGGDEI 60 Query: 55 NVPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIEA--EIPLIVCITEGIPVLDMV 111 + VF + EA A+ + + A D +E++ + +I+ EGIP Sbjct: 61 MIDVFRSTEEAVAAHPNADVLLNFASFRTAYDVTMEALAIPGQFRVIMVTAEGIPERLAR 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLT 163 + + +IGP G + P + KI I+ + R GS G+++RSG L Sbjct: 121 TMNQAARDAGVTVIGPATVGAIAPGAFKIANIGGTIENIIKSKLHRAGSAGLVTRSGGLF 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E + G + V IGGD G+ FID + ++ + ++++GE+GG+ E + Sbjct: 181 NELCNIIALNADGIAEGVAIGGDRFVGSVFIDNMLRMESNPDVKYMILLGEVGGTEEYKV 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 + +K KP++ + G A G GHAGA + + A K AM+EAGI Sbjct: 241 IEAVK---SGKITKPVIAWCIGTIAKHFSSGVQFGHAGASANADRETAAAKNEAMREAGI 297 Query: 281 CIAPSPARIGRSLVELLGSL 300 + S + R + E+ L Sbjct: 298 HVPESFNDLPRVINEVYTKL 317 >gi|307721496|ref|YP_003892636.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfurimonas autotrophica DSM 16294] gi|306979589|gb|ADN09624.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfurimonas autotrophica DSM 16294] Length = 604 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 79/319 (24%), Positives = 136/319 (42%), Gaps = 22/319 (6%) Query: 1 MSILVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNV 54 M L ++T+ + T + I V + P +W G + Sbjct: 1 MGKLFTRDTQAIFWNNNKTAIQRMLDYDYTIKRETPSVAAIVAPTSANKFEKFFWGGDEI 60 Query: 55 NVPVFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMVR 112 +P++ + EAK + A+ + + A D +E++ I+ EGIP Sbjct: 61 MIPLYKSTPEAKAAQPQADVLLNFASFRTAYDVTMEALNIGGFKTIMITAEGIPERLARG 120 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTY 164 + A + + +IGP G + P + KI I+ + R+GS G+++RSG L Sbjct: 121 MNAYARELNVTVIGPATVGAIVPGAFKIANIGGTIENIINSKLHREGSCGLVTRSGGLFN 180 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E + G + V IGGD G+ FID L + + ++++GE+GG+ E + Sbjct: 181 ELSNIIAINADGIAEGVAIGGDRFVGSVFIDNLLRMEKNPDVKYMILLGEVGGTEEYKVI 240 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 + +K KPI+ + G A G GHAGA + + AE K AM EAGI Sbjct: 241 EAVK---SGKITKPIIAWCIGTIAKYYDSGVQFGHAGASANAERETAEAKNKAMAEAGIH 297 Query: 282 IAPSPARIGRSLVELLGSL 300 + + + +++E+ L Sbjct: 298 VPATFNDLPATIMEVYDDL 316 >gi|195953639|ref|YP_002121929.1| CoA-binding domain protein [Hydrogenobaculum sp. Y04AAS1] gi|195933251|gb|ACG57951.1| CoA-binding domain protein [Hydrogenobaculum sp. Y04AAS1] Length = 329 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 101/309 (32%), Positives = 154/309 (49%), Gaps = 18/309 (5%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +++NT+ +V G+TG+ + + + G+ P KG NVPV+ T Sbjct: 4 TVYLNENTRFVVIGITGREASQVVTETEALYPGFIKAGVTPGKGGASV----ANVPVYNT 59 Query: 62 VAEAKERTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 V EAK NA +IYVPP DA+IE + I LI ITE +P+ D ++ Sbjct: 60 VKEAKTHHPEINAGLIYVPPVSVKDAVIELVNNGIKLIYIITEHVPIRDTAYFYNYAKER 119 Query: 121 SSRLIGPNCPGILTPD-SCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 ++GP G + P ++G + P ++ G + ILS+SG LT + G Sbjct: 120 GVIIVGPTSLGAIVPSVPMRVGAIGGKDPSIAYKPGGLVILSKSGGLTTTTAEMMMRRGW 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G TA+ +GGD + T F DV+ D ++IV+ GE+GG+ EE AA + + K+G+ Sbjct: 180 GVYTAIALGGDVISCTTFEDVIRNIHNDPNVKAIVIQGEVGGTYEENAAMAILELYKQGK 239 Query: 236 -KKPIVGFVAGKTAP--PGRTMGHAGAVISGGKGGAEDKINAMKEAG-----ICIAPSPA 287 KKP+ FVAG+ G + GHAGA++ GKG A KI E G + +A Sbjct: 240 WKKPVAAFVAGRFQENLEGVSFGHAGAIVERGKGKASTKIKLFNEVGKETGLVKVAEFYH 299 Query: 288 RIGRSLVEL 296 + L EL Sbjct: 300 DLPTCLEEL 308 >gi|323448894|gb|EGB04787.1| hypothetical protein AURANDRAFT_72443 [Aureococcus anophagefferens] Length = 1127 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 90/342 (26%), Positives = 141/342 (41%), Gaps = 46/342 (13%) Query: 2 SILVDKNTKVLVQGL---------TGK----------------AGTFHTEQAILYCQTQV 36 S+ T+ LV GL TG+ G + + V Sbjct: 484 SVQFTAETRCLVYGLQQRAVPKSTTGRVIPAKLQTSLARQRAVQGMLDFDFMCKRKKPSV 543 Query: 37 VGGIHPKKG----STYWTGGNVNVPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIES- 90 ++P +G YW VPV+T++AEA + A+ V + D +E+ Sbjct: 544 AAMVYPFQGNHYVKFYWGTEETLVPVYTSIAEAASKHGDASCLVNFASYRSVYDTCMETF 603 Query: 91 -IEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG-------- 141 + A+I + I EG+P + A E++ L+GP G + P +IG Sbjct: 604 KLSAQIRTVAIIAEGVPEAQTRDIAAAAEEAGVGLVGPATVGGIKPGCFRIGNTGGMLDN 663 Query: 142 IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFL 201 I+ ++R GSV +S+SG ++ E ++ G V IGGD G+ FID L + Sbjct: 664 IVMSKLYRPGSVCYVSKSGGMSNELNNIIARSSDGVCEGVAIGGDRYPGSRFIDHLLRYN 723 Query: 202 ADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAG 258 + + +V++GE+GG E + L+ KP+V + G A GHAG Sbjct: 724 DNPDCQILVLLGEVGGVDEYDVCAALESGRI---DKPLVAWCIGTCASAFSFEVQFGHAG 780 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 A G A DK A+ +AG + S A G L E+ L Sbjct: 781 ACARGLGEAAVDKNAALAKAGAVVPRSFAEFGARLSEVYALL 822 >gi|15606916|ref|NP_214297.1| succinyl-CoA ligase alpha subunit [Aquifex aeolicus VF5] gi|2984152|gb|AAC07686.1| succinyl-CoA ligase alpha subunit [Aquifex aeolicus VF5] Length = 368 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 103/309 (33%), Positives = 153/309 (49%), Gaps = 20/309 (6%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 ++ T+++V G+TG+ + ++ + G+ P KG T G VPVF TV Sbjct: 31 YLNDKTRIIVVGITGREASQVVTESEALYPGFIKVGVTPGKGGTEVAG----VPVFNTVK 86 Query: 64 EAKERT---AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 EA N ++YVPP+ DA+IE I+A I LI +TE +P+ D V ++ Sbjct: 87 EALSSPEGKDVNTGLVYVPPASVKDAVIELIDAGIKLIYIVTEHVPIRDTVYFYHYAKER 146 Query: 121 SSRLIGPNCPGILTPD-SCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 ++GP G + P +IG + P + G + ILS+SG LT + G Sbjct: 147 GVTIVGPTSLGCIVPRIPARIGAIGGKNPSIAYADGGLVILSKSGGLTTTTAEMFKRRGW 206 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G A+ +GGD + T F DVLE D + +V+ GE+GG+ EE+AA+ + K GR Sbjct: 207 GVYMALALGGDVISCTTFADVLEEIADDPNVKGVVIQGEVGGTYEEQAAETILRLYKEGR 266 Query: 236 K-KPIVGFVAGKTAP--PGRTMGHAGAVISGGKGGAEDKINAMKEAG-----ICIAPSPA 287 KP+ FVAGK G + GHAGA++ GKG A DKI E G + +A Sbjct: 267 WNKPVAAFVAGKFQEKMEGVSFGHAGAIVERGKGKATDKIRMFNEVGKETGLVKVAEFYH 326 Query: 288 RIGRSLVEL 296 + + EL Sbjct: 327 DLVNCIEEL 335 >gi|302655995|ref|XP_003019755.1| hypothetical protein TRV_06178 [Trichophyton verrucosum HKI 0517] gi|291183524|gb|EFE39131.1| hypothetical protein TRV_06178 [Trichophyton verrucosum HKI 0517] Length = 635 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 74/296 (25%), Positives = 122/296 (41%), Gaps = 20/296 (6%) Query: 22 TFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPVFTTVAEAKERT-AANASVI 76 + V I+ G YW +PV+ +A + + V Sbjct: 1 MLDFDFICKRSTPSVAAIIYTFGGQFVSKMYWGTSETLLPVYQDTNKAMAKHADVDTVVN 60 Query: 77 YVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + + +E +E +I I I EG+P + R ++ +IGP G + P Sbjct: 61 FASSRSVYSSTMELMEFPQIKTIAIIAEGVPERRAREIMVRAKEKGVTIIGPATVGGIKP 120 Query: 136 DSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + KIG I+ ++RKGSV +S+SG ++ E Q G V IGGD Sbjct: 121 GAFKIGNTGGMMDNIVASKLYRKGSVAYVSKSGGMSNELNNIVCQTTDGVCEGVAIGGDR 180 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 GT F+D L + A+ + ++++GE+GG E + +K+ KP+V + G Sbjct: 181 YPGTTFLDHLLRYQANPECKILLLLGEVGGVEEYRVIEAVKN---GTITKPVVAWAIGTC 237 Query: 248 APPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 A + GHAGA + A K +M+EAGI + + + L + L Sbjct: 238 ASMFKTEVQFGHAGASANSDLETAVTKNKSMREAGIHVPDTFEDLPDVLAAVYQKL 293 >gi|268325586|emb|CBH39174.1| putative ATP-citrate synthase, alpha subunit [uncultured archaeon] Length = 621 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 80/318 (25%), Positives = 139/318 (43%), Gaps = 23/318 (7%) Query: 3 ILVDKNTKVLVQGLT--GKAGTFHTEQAILYCQTQVVGGIHP---KKG--STYWTGGNVN 55 +L DK+T ++ G H + V ++P +KG ++ + Sbjct: 7 LLFDKDTTAIIFGNQQAAVQRMLHFGYLAGREKPSVAAIVNPSGGRKGLMKVFYGRDEIL 66 Query: 56 VPVFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMVRV 113 +P++ + A + A+ + + A D +E++ I + I EGIP ++ Sbjct: 67 LPMYNKLGTAVKNHPDADVVINFASFRSAYDVSVEALNYPTIKTVAIIAEGIPERQTRQL 126 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 A +K +IGP G KIG ++ ++R GSVG +S+SG + E Sbjct: 127 IALRKKLGKWIIGPATVGGFVAGGFKIGNAGGALSNLLMSKLYRPGSVGFVSKSGGMLNE 186 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 ++ G + IGGD G+ ++ L+ + A+ + +V++GE+GG E E Sbjct: 187 MANMIARNSDGVYEGIAIGGDKYPGSTLVEHLQRYEANPEIKMMVVLGEVGGDDEYEIVD 246 Query: 226 FLKDEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +KD KKP+V +V G A P GHAGA+ G A+ K A+KEAG + Sbjct: 247 AIKDGR---LKKPLVAWVTGTCAKVFPSEVQFGHAGAMARGEAETADAKNAALKEAGAYV 303 Query: 283 APSPARIGRSLVELLGSL 300 S + + ++ L Sbjct: 304 PNSYNDFDKLIRKVYDDL 321 >gi|5304837|emb|CAB46077.1| ATP citrate lyase [Cyanophora paradoxa] Length = 641 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 84/319 (26%), Positives = 140/319 (43%), Gaps = 22/319 (6%) Query: 1 MSILVDKNTKVLVQGL--TGKAGTFHTEQAILYCQTQVVGGIHPK-KGST---YWTGGNV 54 M+ L ++T+ L+ + V G I+ KG ++ + Sbjct: 6 MAQLFSRSTQALIFNYKPNPVQRMLDFDFLARRETPSVAGLINVGSKGGFEKVFFGTKEI 65 Query: 55 NVPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMVR 112 VPV+ + +A A+ + + A + +E++E I ++V I EG+P D+ + Sbjct: 66 AVPVYASTQDAVRAHPNADVFINFASFRSAYQSSLEALEIPSIRVVVIIAEGVPEADVKK 125 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTY 164 + A +K LIGP G + + KIG I+ + R GSVG +S+SG L+ Sbjct: 126 LIAVSKKKGKILIGPATVGGVQAGAFKIGDTAGTVDNIISCKLHRPGSVGFVSKSGGLSN 185 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E S+ G + + GD GT D + F + IV++GE+GG+ E E Sbjct: 186 ECYNILSRTTDGLFEGIAVRGDAFPGTTLADHVIRFQHIPQVKMIVVLGELGGTDEYEIV 245 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 + +K K KPI +V+G A P GHAGA G AE K A+++AG Sbjct: 246 EAMK---KGVITKPICAWVSGTCAKVFPSEVQFGHAGAKSGGMAESAEAKNQALRDAGAH 302 Query: 282 IAPSPARIGRSLVELLGSL 300 + S + ++ ++ L Sbjct: 303 VPTSFEELPDTIGKVYKDL 321 >gi|74096325|ref|NP_001027756.1| ATP citrate-lyase [Ciona intestinalis] gi|9229902|dbj|BAB00624.1| ATP citrate-lyase [Ciona intestinalis] Length = 1101 Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 77/316 (24%), Positives = 135/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 + T+ ++ GL + G + V ++P K YW + +P Sbjct: 491 MFTNKTRCIIWGLQSRAVQGMMDFDFVCSRKTPSVAAMVYPFSGDHKQKFYWGHKEILIP 550 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMVRVKA 115 V+ +++A + A+ + + A ++ I++++ + I I I EGIP ++ Sbjct: 551 VYKNMSDAMHKHSDADVMISFASLRSAEESTIDTLQYQQIRTIAIIAEGIPEATTKKLNK 610 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 611 LAREKNVSIIGPATVGGIKPGCFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 670 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S+ G V IGGD GT F+D + + D + IV++GE+GG+ E + + Sbjct: 671 NIISRTTNGVCEGVAIGGDRYPGTTFMDHILRYQNDANVKMIVVLGEVGGTEEYDICDAI 730 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K KP++ + G A GHAGA + A K A+ AG + Sbjct: 731 KSATI---TKPVIAWCIGTCATMFASEVQFGHAGACANQASETAAAKNKALAAAGAHVPC 787 Query: 285 SPARIGRSLVELLGSL 300 S + + E+ +L Sbjct: 788 SFNELNTKIREVYNNL 803 >gi|312183633|gb|ADQ42386.1| ATP-citrate lyase subunit A [Methanosaeta harundinacea] Length = 614 Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats. Identities = 81/312 (25%), Positives = 126/312 (40%), Gaps = 15/312 (4%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L D+NT+ V GL + V I+P +G +W + +P+ Sbjct: 8 LFDRNTRAFVYGLQTNAIQRMLDFDYLCRREVPSVAAIINPNRGGVQKVFWGTEEILLPM 67 Query: 59 FTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMVRVKAR 116 + T+ EA A V + A D +E++ + I + I EG+P + A Sbjct: 68 YKTIPEAAAAHPFAEVMVNFASFRSAFDTTMEALASPTIKTVAIIAEGVPERMARVMAAT 127 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 K +IGP G L + +IG I+ + R GSVG +S+SG + EA Sbjct: 128 ARKMKKTIIGPATVGGLAAGAFRIGNTAGTIENIIESKLHRPGSVGFVSKSGGMLNEAFN 187 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ +D + F A+ I +GE+GG+ E + LK Sbjct: 188 IIARNSSGVVEGIAIGGDRYPGSNLMDHILRFEANPEVAIIACLGEVGGTDEYRIVEALK 247 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + + V K P GHAGA A+ K A+KEAG + S Sbjct: 248 ADQIKKPLVIWVTGTCSKILPGSVQFGHAGAKAQTDLETADAKNRALKEAGAIVPASFDS 307 Query: 289 IGRSLVELLGSL 300 G + + L Sbjct: 308 YGDEIRGVYERL 319 >gi|150021736|ref|YP_001307090.1| CoA-binding domain-containing protein [Thermosipho melanesiensis BI429] gi|149794257|gb|ABR31705.1| CoA-binding domain protein [Thermosipho melanesiensis BI429] Length = 280 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 158/290 (54%), Gaps = 12/290 (4%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 +++ +V VQG+TG+ G+FHT++ + Y T +V G+ K +PV + Sbjct: 1 MINGTERVCVQGITGRYGSFHTKKMLKY-GTNIVCGVSKNK----VVKELDGIPVLNDMY 55 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 +A E+ + S+++VP A +AI E+I A I I+ ITE IP+ DM+ + ++++ Sbjct: 56 DAVEKYNCDTSIVFVPAKHAKNAIFEAINAGIKKIITITEHIPIHDMMEIYKLSKQNNVT 115 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 IGPNCPG++ P KIGIMP + F+ G + I+S+SGTL YE S++ G +G+ Sbjct: 116 FIGPNCPGVILPGISKIGIMPENAFKPGDIAIISKSGTLMYEISNLLSKKSTGIKIGIGL 175 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDP+ GT + LE F I+++ EIG + E ++ +G I F Sbjct: 176 GGDPIIGTSIEEALE-FSITLNPRKIIIISEIGSNDEVIG---IEKFLNKGYNANIQVFF 231 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 AG+TAP G+ MGHAGA++ G K E K +K I +A I L Sbjct: 232 AGRTAPRGKKMGHAGAIVDGIKSSIEYKEKRLKAIKIPVAKY---IPELL 278 >gi|302498025|ref|XP_003011011.1| hypothetical protein ARB_02743 [Arthroderma benhamiae CBS 112371] gi|291174558|gb|EFE30371.1| hypothetical protein ARB_02743 [Arthroderma benhamiae CBS 112371] Length = 601 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 74/296 (25%), Positives = 122/296 (41%), Gaps = 20/296 (6%) Query: 22 TFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPVFTTVAEAKERT-AANASVI 76 + V I+ G YW +PV+ +A + + V Sbjct: 1 MLDFDFICKRSTPSVAAIIYTFGGQFVSKMYWGTSETLLPVYQDTNKAMAKHADVDTVVN 60 Query: 77 YVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + + +E +E +I I I EG+P + R ++ +IGP G + P Sbjct: 61 FASSRSVYSSTMELMEFPQIKTIAIIAEGVPERRAREIMVRAKEKGVTIIGPATVGGIKP 120 Query: 136 DSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + KIG I+ ++RKGSV +S+SG ++ E Q G V IGGD Sbjct: 121 GAFKIGNTGGMMDNIVASKLYRKGSVAYVSKSGGMSNELNNIVCQTTDGVCEGVAIGGDR 180 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 GT F+D L + A+ + ++++GE+GG E + +K+ KP+V + G Sbjct: 181 YPGTTFLDHLLRYQANPECKILLLLGEVGGVEEYRVIEAVKN---GTITKPVVAWAIGTC 237 Query: 248 APPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 A + GHAGA + A K +M+EAGI + + + L + L Sbjct: 238 ASMFKTEVQFGHAGASANSDLETAVTKNKSMREAGIHVPDTFEDLPDVLAAVYQKL 293 >gi|21673914|ref|NP_661979.1| citrate lyase, subunit 2 [Chlorobium tepidum TLS] gi|21647054|gb|AAM72321.1| citrate lyase, subunit2 [Chlorobium tepidum TLS] Length = 610 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 106/318 (33%), Positives = 176/318 (55%), Gaps = 18/318 (5%) Query: 1 MSILVDKNTK-VLVQGLTGKAGTFHTEQA--ILYCQTQVVGGIHPKKGST----YWTGGN 53 MSIL +K+T+ V++ G+ G Q ++ V ++P + + G Sbjct: 1 MSILANKDTRAVIIGGVAGVNAAKRMAQFDYLINRPLTVQAFVYPPEAGQQKEIFRGGEL 60 Query: 54 VNVPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMV 111 NV V+ ++A A E N ++IY+ S A +A +E++E I L+ ITEG+P D Sbjct: 61 KNVTVYPSLAPALNEHPDINTALIYLGASRATEAAMEALESPNIQLVSMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI--------FRKGSVGILSRSGTLT 163 R+K +K L GP+ GI++ C++G++ G +R+GS G+L++SG L+ Sbjct: 121 RLKKLAQKLGKMLNGPSSIGIMSAGECRLGVIGGEYRNLKLCNLYRQGSFGVLTKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 EA++ +Q G G ++AV IGGD GT+F+ LE+F D AT+++VM+GE+GG+ EEEA Sbjct: 181 NEAMWLCAQNGDGITSAVAIGGDAYPGTDFVTYLEMFEKDPATKAVVMIGEVGGNLEEEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS-GGKGGAEDKINAMKEAGICI 282 A++L E +R + +G + P G GHAGA G G A K+NA++EAG + Sbjct: 241 AEWLAAEPRRIKLIAAIGGTCQEVLPQGMKFGHAGAKEGKKGAGSARSKMNALREAGALV 300 Query: 283 APSPARIGRSLVELLGSL 300 + + +++ ++ L Sbjct: 301 PDTFGGLSKAIKQVYEEL 318 >gi|289704563|ref|ZP_06500997.1| succinyl-CoA synthetase subunit alpha [Micrococcus luteus SK58] gi|289558751|gb|EFD52008.1| succinyl-CoA synthetase subunit alpha [Micrococcus luteus SK58] Length = 256 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 120/240 (50%), Positives = 161/240 (67%), Gaps = 13/240 (5%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-------K 119 E+T A+ SV +VPP+ A DA IE+IEAEIPL+V ITEGIPV D A + K Sbjct: 21 EKTGADVSVAFVPPAFAKDAAIEAIEAEIPLLVVITEGIPVQDSAEFFALSQSKTGEDGK 80 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +R+IGPNCPGI+TP GI P +I G +G++S+SGTLTY+ +++ G ST Sbjct: 81 PKTRIIGPNCPGIITPGEALAGITPATITGTGPIGLVSKSGTLTYQMMYELRD--FGFST 138 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 A+GIGGDPV GT ID LE F AD T++IVM+GEIGG AEE AA+F+K KP+ Sbjct: 139 AIGIGGDPVIGTTHIDALEAFEADPDTQAIVMIGEIGGDAEERAAEFIKANV----TKPV 194 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 VG+VAG TAP G+TMGHAGA++SG G A+ K A++ AG+ + +P+ + + E+L + Sbjct: 195 VGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAQLMREILQA 254 >gi|12407237|dbj|BAB21376.1| ATP-citrate lyase alpha-subunit [Chlorobium limicola] Length = 608 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 105/318 (33%), Positives = 173/318 (54%), Gaps = 18/318 (5%) Query: 1 MSILVDKNTK-VLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGST----YWTGGN 53 MSIL +K+T+ V++ G+ G Q V ++P + + G Sbjct: 1 MSILANKDTRAVIIGGVAGVNAAKRMAQFDFLVNRPLTVQAFVYPPEAGQQKEIFRGGEL 60 Query: 54 VNVPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMV 111 NV V+ ++A A E N ++IY+ S A A E++E I L+ ITEG+P D Sbjct: 61 KNVTVYDSLAPALEEHPDINTALIYLGASRAAQAAKEALESPNIQLVSMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGTLT 163 R+K +K L GP+ GI++ C++G++ G +++R+GS G+L++SG L+ Sbjct: 121 RLKKLAQKLGKMLNGPSSIGIMSAGECRLGVIGGEFKNLKLCNLYRQGSFGVLTKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 EA++ +Q G G ++AV IGGD GT+F+ LE+F D AT+++VM+GE+GG+ EEEA Sbjct: 181 NEAMWLCAQNGDGITSAVAIGGDAYPGTDFVTYLEMFEKDPATKAVVMIGEVGGNLEEEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS-GGKGGAEDKINAMKEAGICI 282 A++L E +R + +G + P G GHAGA G G A K+NA+++AG + Sbjct: 241 AEWLAAEPRRIKLIAAIGGTCQEVLPQGMKFGHAGAKEGKKGAGSARSKMNALRDAGAYV 300 Query: 283 APSPARIGRSLVELLGSL 300 + + + + ++ L Sbjct: 301 PDTFGGLSKEIKKVYEEL 318 >gi|213618691|ref|ZP_03372517.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 186 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 111/190 (58%), Positives = 144/190 (75%), Gaps = 4/190 (2%) Query: 109 DMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 DM+ VK +L+++ R+IGPNCPG++TP CKIGIMPG I + G VGI+SRSGTLTYEAV Sbjct: 1 DMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVK 60 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 QT+ G GQST VGIGGDP+ G+ FID+L+LF D TE+IVM+GEIGGSAEEEAA ++K Sbjct: 61 QTTDYGFGQSTCVGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIK 120 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 D KP+VG++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A Sbjct: 121 DHV----TKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLAD 176 Query: 289 IGRSLVELLG 298 IG +L ++ Sbjct: 177 IGEALKAIIK 186 >gi|193212664|ref|YP_001998617.1| ATP-citrate lyase/succinyl-CoA ligase [Chlorobaculum parvum NCIB 8327] gi|193086141|gb|ACF11417.1| ATP-citrate lyase/succinyl-CoA ligase [Chlorobaculum parvum NCIB 8327] Length = 608 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 104/318 (32%), Positives = 173/318 (54%), Gaps = 18/318 (5%) Query: 1 MSILVDKNTK-VLVQGLTGKAGTFHTEQAILYCQTQ--VVGGIHPKKGST----YWTGGN 53 MSIL +K+T+ V++ G+ G Q V ++P + + G Sbjct: 1 MSILANKDTRAVIIGGVAGVNAAKRMAQFDFLVNRPLTVQAFVYPPEAGQQKEIFRGGEL 60 Query: 54 VNVPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMV 111 NV V+ ++A A E N ++IY+ S A A E++E I L+ ITEG+P D Sbjct: 61 KNVTVYDSLAPALEEHPDINTALIYLGASRAAQAAKEALESPNIQLVSMITEGVPEKDAK 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--------SIFRKGSVGILSRSGTLT 163 R++ +K L GP+ GI++ C++G++ G +++R+GS G+L++SG L+ Sbjct: 121 RLRKLAQKLGKMLNGPSSIGIMSAGECRLGVIGGEFKNLKLCNLYRQGSFGVLTKSGGLS 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 EA++ +Q G G ++AV IGGD GT+F+ LE+F D AT+++VM+GE+GG+ EEEA Sbjct: 181 NEAMWLCAQNGDGITSAVAIGGDAYPGTDFVTYLEMFEKDPATKAVVMIGEVGGNLEEEA 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS-GGKGGAEDKINAMKEAGICI 282 A++L E +R + +G + P G GHAGA G G A K+NA+++AG + Sbjct: 241 AEWLAAEPRRIKLIAAIGGTCQEVLPQGMKFGHAGAKEGKKGAGSARSKMNALRDAGAYV 300 Query: 283 APSPARIGRSLVELLGSL 300 + + + + ++ L Sbjct: 301 PDTFGGLSKEIKKVYEEL 318 >gi|152990402|ref|YP_001356124.1| ATP citrate synthase, subunit 2 [Nitratiruptor sp. SB155-2] gi|151422263|dbj|BAF69767.1| ATP citrate synthase, subunit 2 [Nitratiruptor sp. SB155-2] Length = 614 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 74/316 (23%), Positives = 129/316 (40%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++T+ + + I + V + P K ++ V +P Sbjct: 3 LFTRDTQAIFWNNNRSAIQRMLDYDYVIKREKPSVAAIVAPTSSNKFDKFFFGTDEVMIP 62 Query: 58 VFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 ++ + EA A+ + + A D ++++ + I+ EGIP + Sbjct: 63 IYRSTEEAAAAHPNADVLLNFASFRTAYDVTMDALRFDQFKTIMITAEGIPERLARIMNK 122 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + +IGP G +TP + K+ I+ + R GS G+++RSG L E Sbjct: 123 TAREQGVLIIGPATVGAITPGAFKVANIGGTIENIVKSKLHRPGSCGLVTRSGGLFNELC 182 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + G + V IGGD G+ FID L D + ++++GE+GG E + + + Sbjct: 183 NIIALNADGVADGVAIGGDRFVGSVFIDHLLRMEKDPNVKYMLLLGEVGGREEYKVIEAV 242 Query: 228 KDEAKRGRKKPIVGFVAGKTAPP---GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K KP++G+ G A G GHAGA + + A K AM+EAGI + Sbjct: 243 K---SGKITKPVIGWCIGTIAQHFSTGVQFGHAGASANADEETAVAKNQAMREAGIHVPD 299 Query: 285 SPARIGRSLVELLGSL 300 S + + + L Sbjct: 300 SFNDLPHVIKGVYEEL 315 >gi|254456844|ref|ZP_05070272.1| ATP-citrate synthase subunit 1 [Campylobacterales bacterium GD 1] gi|207085636|gb|EDZ62920.1| ATP-citrate synthase subunit 1 [Campylobacterales bacterium GD 1] Length = 604 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 82/319 (25%), Positives = 133/319 (41%), Gaps = 22/319 (6%) Query: 1 MSILVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNV 54 M+ L ++T+ + T + I + V + P G ++ V Sbjct: 1 MAQLFTRDTQAIFWNNNKTAIQRMLDYDYTIKREKPSVAAIVAPTAGNKFDKFFYGPDEV 60 Query: 55 NVPVFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVR 112 +P+F T AEAK + A+ + + A D +E++ I+ EGIP Sbjct: 61 MIPLFRTTAEAKAAQPQADVLLNFASFRTAYDVTMEALNLGGFTSIMITAEGIPERLARA 120 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTY 164 + + +IGP G + P + KI I+ + R GS G+++RSG L Sbjct: 121 MNEFARGKNVTVIGPATVGAIAPGAFKIANIGGTIENIVQSKLHRAGSCGLVTRSGGLFN 180 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E S G + V IGGD G+ FID L A+ + ++++GE+GG+ E + Sbjct: 181 ELSNIISLNADGIAEGVAIGGDRFVGSVFIDNLLRMEANPEVKYMLLLGEVGGTEEYKVI 240 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +K KPI+ + G A G GHAGA + + AE K AM+E GI Sbjct: 241 DAIKA---GKLTKPIIAWCIGTIAKHYDSGVQFGHAGASANDDRETAESKNTAMREVGIH 297 Query: 282 IAPSPARIGRSLVELLGSL 300 + S + + + L Sbjct: 298 VPGSFNDLPEIISAVYHDL 316 >gi|302764914|ref|XP_002965878.1| hypothetical protein SELMODRAFT_270523 [Selaginella moellendorffii] gi|300166692|gb|EFJ33298.1| hypothetical protein SELMODRAFT_270523 [Selaginella moellendorffii] Length = 607 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 76/315 (24%), Positives = 135/315 (42%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQGL--TGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L ++T+ L + + V G ++P ++ + VPV Sbjct: 6 LFSRSTQALFYNFKQSPIQRMLDFDFLCARELPSVAGIVNPGSDGFQKLFFGQEEIAVPV 65 Query: 59 FTTV-AEAKERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 + +V A K A+ + + A + +E++ + I ++ I EG+P D ++ A Sbjct: 66 YGSVVAGCKAHPTADVFINFASFRSAFASSMEALKQPTIRVVAIIAEGVPEGDAKKLIAY 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 ARANNKVVIGPATVGGMQAGAFKIGDTAGTLDNIVSCKLYRPGSVGFVSKSGGMSNEMYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + IV++GE+GG+ E + L+ Sbjct: 186 VLARATDGLYEGIAIGGDVFPGSTLSDHVLRFNNIPQIKLIVVLGELGGTDEYSLVEALQ 245 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 KP+V +V+G A + GHAGA G A+ K A+KEAG + S Sbjct: 246 QGR---VHKPVVAWVSGTCAKLFKSEVQFGHAGAKSGGDLESAQGKNKALKEAGAIVPTS 302 Query: 286 PARIGRSLVELLGSL 300 + + + L Sbjct: 303 FESLEAVIKDTFEKL 317 >gi|152992138|ref|YP_001357859.1| ATP citrate synthase subunit 2 [Sulfurovum sp. NBC37-1] gi|151423999|dbj|BAF71502.1| ATP citrate synthase, subunit 2 [Sulfurovum sp. NBC37-1] Length = 606 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 82/320 (25%), Positives = 137/320 (42%), Gaps = 23/320 (7%) Query: 1 MSILVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNV 54 MS L K+T+ + T + I + V G + P G ++ + Sbjct: 1 MSRLYTKDTQAIFWNNNKTAIQRMLDYDYTIGRDKPSVAGIVAPTSGNKFEKFFYGPDEI 60 Query: 55 NVPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAE--IPLIVCITEGIPVLDMV 111 + ++ + A+A + A+ + + A D +E+IE I+ EGIP Sbjct: 61 MISLYKSTADAVKEQPQADVLLNFASFRTAYDVTMEAIEMGDQFRSIMITAEGIPERLAR 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLT 163 ++ + +IGP G + P + KI I+ + R GS G+++RSG L Sbjct: 121 KMNQAARDAGITVIGPATVGAIAPGAFKIANIGGTIENIVNSKLHRAGSCGLVTRSGGLF 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E + G + V IGGD G+ FID L ++ + ++++GE+GG+ E + Sbjct: 181 NELSNIIAINADGIAEGVAIGGDRFVGSVFIDHLLRMESNPDVKYMILLGEVGGTEEYKV 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 + +KD KKPI+ + G A G GHAGA + A K AM EAGI Sbjct: 241 IEAVKDGRI---KKPIIAWCIGTIAKHFSSGVQFGHAGASANADAETAAAKNKAMAEAGI 297 Query: 281 CIAPSPARIGRSLVELLGSL 300 + S + ++ E+ L Sbjct: 298 HVPESFNDLPATIAEVYNDL 317 >gi|302802744|ref|XP_002983126.1| hypothetical protein SELMODRAFT_271604 [Selaginella moellendorffii] gi|300149279|gb|EFJ15935.1| hypothetical protein SELMODRAFT_271604 [Selaginella moellendorffii] Length = 607 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 76/315 (24%), Positives = 135/315 (42%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQGL--TGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L ++T+ L + + V G ++P ++ + VPV Sbjct: 6 LFSRSTQALFYNFKQSPIQRMLDFDFLCARELPSVAGIVNPGSDGFQKLFFGQEEIAVPV 65 Query: 59 FTTV-AEAKERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 + +V A K A+ + + A + +E++ + I ++ I EG+P D ++ A Sbjct: 66 YGSVVAGCKAHPTADVFINFASFRSAFASSMEALKQPTIRVVAIIAEGVPEGDAKKLIAY 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 ARANNKVVIGPATVGGMQAGAFKIGDTAGTLDNIVSCKLYRPGSVGFVSKSGGMSNEMYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + IV++GE+GG+ E + L+ Sbjct: 186 VLARATDGLYEGIAIGGDVFPGSTLSDHVLRFNNIPQIKLIVVLGELGGTDEYSLVEALQ 245 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 KP+V +V+G A + GHAGA G A+ K A+KEAG + S Sbjct: 246 QGR---VHKPVVAWVSGTCAKLFKSEVQFGHAGAKSGGDLESAQGKNKALKEAGAIVPTS 302 Query: 286 PARIGRSLVELLGSL 300 + + + L Sbjct: 303 FESLEAVIKDTFEKL 317 >gi|193216249|ref|YP_001997448.1| ATP-citrate lyase/succinyl-CoA ligase [Chloroherpeton thalassium ATCC 35110] gi|193089726|gb|ACF15001.1| ATP-citrate lyase/succinyl-CoA ligase [Chloroherpeton thalassium ATCC 35110] Length = 617 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 105/320 (32%), Positives = 173/320 (54%), Gaps = 22/320 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQA-----ILYCQTQVVGGIHPKKGST----YWTG 51 MSILV K+T+V++ G G+AG ++ ++ V ++P + + Sbjct: 1 MSILVSKDTRVVIIG--GRAGLNAAKRMAEFDFLVQKSLTVQAFVYPPEQGQQKEIFHGA 58 Query: 52 GNVNVPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLD 109 N+PV++ ++EA E + ++IY+ A A E++EA I L+ ITEG+P D Sbjct: 59 KIENIPVYSQLSEALSEHPNIDTALIYIGAERAFGAAKEALEAKNIKLVSMITEGVPEKD 118 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI--------FRKGSVGILSRSGT 161 R+ +++S GP+ GILT C++G++ G +R GS G++++SG Sbjct: 119 ARRLAKIAKQNSKIFNGPSSIGILTAGGCRLGVIGGEFNNLKKCLLYRPGSFGVITKSGG 178 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 L+ E ++ +Q G G ST V IGGD GT+F+ LE+F D T+++V+VGE+GGS EE Sbjct: 179 LSNETMWLCAQNGDGISTTVSIGGDAYPGTDFVTYLEMFEQDLDTKAVVIVGEVGGSLEE 238 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK-GGAEDKINAMKEAGI 280 EAA++ + +R R +VG + P G GHAGA G+ G A K+ AMK+AG Sbjct: 239 EAAEWFAAKKRRIRLIGVVGGTCQEVLPQGMKFGHAGAKEGKGRAGSARSKMQAMKDAGA 298 Query: 281 CIAPSPARIGRSLVELLGSL 300 + + + + + ++ L Sbjct: 299 LVPDTFGGLSKCIKQVYEEL 318 >gi|254470920|ref|ZP_05084323.1| succinyl-CoA ligase (GDP-forming) subunit alpha [Pseudovibrio sp. JE062] gi|211960062|gb|EEA95259.1| succinyl-CoA ligase (GDP-forming) subunit alpha [Pseudovibrio sp. JE062] Length = 213 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 127/176 (72%), Positives = 151/176 (85%), Gaps = 3/176 (1%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN---VNVP 57 MSILVDK+TKV+VQGLTGK GTFHTEQA+ Y T++V G+HPKKG W+ G +P Sbjct: 1 MSILVDKDTKVIVQGLTGKTGTFHTEQALAYFGTKMVAGVHPKKGGETWSSGLDSAAELP 60 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 +F +V EAKE T ANASV+YVPP+GA AIIE+I+AEIP IVCITEGIPV DMV+VKARL Sbjct: 61 IFASVKEAKEATGANASVVYVPPAGAAAAIIEAIDAEIPFIVCITEGIPVADMVKVKARL 120 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + S+SRL+GPNCPG+LTP+ CKIGIMPGSIF+KG+VGI+SRSGTLTYEAVFQTSQ+ Sbjct: 121 DNSNSRLLGPNCPGVLTPEECKIGIMPGSIFKKGNVGIVSRSGTLTYEAVFQTSQK 176 >gi|114055040|gb|ABI50085.1| ATP citrate lyase alpha subunit [Sulfurihydrogenibium subterraneum] Length = 546 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 70/313 (22%), Positives = 131/313 (41%), Gaps = 15/313 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ-TQVVGGIHPKKG----STYWTGGNVNVP 57 +L D+NTK + L + + + +V + P ++ + +P Sbjct: 7 LLFDRNTKAIFWNLNTNTIQRMLDYDYVVGRSPSIVAIVAPTSERSFEKFFYGTKEIIIP 66 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCI-TEGIPVLDMVRVKA 115 ++ + EA + A+ + + A +E+ E + I EGIP ++ Sbjct: 67 IYKSTTEAAKLHPEADVLLNFASFRTAYPVTLEAFEIPTIRTIIITAEGIPERYARDMRI 126 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P + +I I+ + R GSVG+++RSG L E Sbjct: 127 KAKQLGKWIIGPATVGGIAPGAFRIANTGGTIENIIASKLHRPGSVGLVTRSGGLFNELS 186 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G S + IGGD G++F+D + F + + ++++GE+GG AE + + + Sbjct: 187 NIIARNADGVSEGIAIGGDRFPGSDFLDHMLRFEKNPQIKFMILLGEVGGEAEYKVVEAV 246 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 K+ K GHAGA + A+ K AMKEAGI + + Sbjct: 247 KNGLITKPVIGWCIGTISKFFGGEVQFGHAGAKAGADRETADAKNKAMKEAGIHVPNNFN 306 Query: 288 RIGRSLVELLGSL 300 + + + L Sbjct: 307 ELPHVIKGIYEML 319 >gi|67925571|ref|ZP_00518901.1| CoA-binding [Crocosphaera watsonii WH 8501] gi|67852590|gb|EAM48019.1| CoA-binding [Crocosphaera watsonii WH 8501] Length = 306 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 90/300 (30%), Positives = 158/300 (52%), Gaps = 17/300 (5%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 ++KVL+QG+T + + + T +V GI T ++PVFT V EA Sbjct: 6 DSKVLIQGITHPLAISYAPR-MKAQGTNIVAGITL----DEETSDINDIPVFTLVEEAVT 60 Query: 68 RTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + S+I+ PP DA +E+I A I +V +T +P LD++ + + + +++ ++G Sbjct: 61 EVGKIDTSLIFSPPYEVLDAGLEAIAANIEQLVIVTAWVPPLDLITLLEQAKATNTFVLG 120 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 G+L PD+ +G+M + KGSVGI+SR L E + ++ GLGQS A+ +G D Sbjct: 121 SGSEGLLVPDNFWLGVMEPEFYSKGSVGIISRCDRLMDEVAKRLTKAGLGQSLAISLGAD 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + G+ F L++ D++T++IV++G+ S E AAQ++ G +KP++ ++ G Sbjct: 181 WIMGSNFEQWLQIMEEDDSTKAIVLLGQPYSSPELLAAQYI----DSGIEKPVIAYLPGI 236 Query: 247 TAPPGRTMGHAGAVISGGKG-------GAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 AP R+ G A ++I+ + A+K+AG+ IA + I + + L S Sbjct: 237 QAPINRSFGDATSIIASQLSYQSTSITEENQTVTALKKAGVKIANNVEEIPKLVKRLFPS 296 >gi|237833545|ref|XP_002366070.1| ATP-citrate synthase, putative [Toxoplasma gondii ME49] gi|211963734|gb|EEA98929.1| ATP-citrate synthase, putative [Toxoplasma gondii ME49] Length = 1281 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 23/316 (7%) Query: 5 VDKNTKVLVQGLTGKAG--TFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVPV 58 + T+ V GL +A + A + V ++ + S Y+ V +PV Sbjct: 667 FTEKTRCFVWGLQTRAVQEMLDFDHACGRKKPSVAAILYEFSVSHQRSFYFGTEEVLLPV 726 Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIE--AEIPLIVCITEGIPVLDMVRVKA 115 + T+ EA + + + + A ++E ++ IV I EG+P + ++ A Sbjct: 727 YQTLQEAVQHFPDVSVLINFASMRSAASVTRLALETAPQLRTIVVIAEGVPEREARQLAA 786 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 LIGP G + + +IG +M ++R GSVG +++SG + E Sbjct: 787 ETRARGVCLIGPATVGGIKSGAFRIGNTGGTLENVMNARLYRPGSVGCVTKSGGMLNEMN 846 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S G A+ IGGD GT +D L F + + +V++GE+GG E E + + Sbjct: 847 NILSIVSDGTYEAIAIGGDRFPGTSMLDHLLRFERNPDIKLLVLLGEVGGGMEYEVVEAI 906 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KP++ + G A + GHAGA + A K A+K AG + Sbjct: 907 KDGR---LTKPLIAWCVGTCASLFSTEVSFGHAGAWAGSNREHAVAKNAALKAAGAFVPS 963 Query: 285 SPARIGRSLVELLGSL 300 S +G+S+ + L Sbjct: 964 SFDELGKSIRHVYVQL 979 >gi|221508061|gb|EEE33648.1| ATP-citrate synthase, putative [Toxoplasma gondii VEG] Length = 1281 Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 23/316 (7%) Query: 5 VDKNTKVLVQGLTGKAG--TFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVPV 58 + T+ V GL +A + A + V ++ + S Y+ V +PV Sbjct: 667 FTEKTRCFVWGLQTRAVQEMLDFDHACGRKKPSVAAILYEFSVSHQRSFYFGTEEVLLPV 726 Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIE--AEIPLIVCITEGIPVLDMVRVKA 115 + T+ EA + + + + A ++E ++ IV I EG+P + ++ A Sbjct: 727 YQTLQEAVQHFPDVSVLINFASMRSAASVTRLALETAPQLRTIVVIAEGVPEREARQLAA 786 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 LIGP G + + +IG +M ++R GSVG +++SG + E Sbjct: 787 ETRARGVCLIGPATVGGIKSGAFRIGNTGGTLENVMNARLYRPGSVGCVTKSGGMLNEMN 846 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S G A+ IGGD GT +D L F + + +V++GE+GG E E + + Sbjct: 847 NILSIVSDGTYEAIAIGGDRFPGTSMLDHLLRFERNPDIKLLVLLGEVGGGMEYEVVEAI 906 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KP++ + G A + GHAGA + A K A+K AG + Sbjct: 907 KDGR---LTKPLIAWCVGTCASLFSTEVSFGHAGAWAGSNREHAVAKNAALKAAGAFVPS 963 Query: 285 SPARIGRSLVELLGSL 300 S +G+S+ + L Sbjct: 964 SFDELGKSIRHVYVQL 979 >gi|221486273|gb|EEE24534.1| ATP-citrate synthase, putative [Toxoplasma gondii GT1] Length = 1281 Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 23/316 (7%) Query: 5 VDKNTKVLVQGLTGKAG--TFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVPV 58 + T+ V GL +A + A + V ++ + S Y+ V +PV Sbjct: 667 FTEKTRCFVWGLQTRAVQEMLDFDHACGRKKPSVAAILYEFSVSHQRSFYFGTEEVLLPV 726 Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIE--AEIPLIVCITEGIPVLDMVRVKA 115 + T+ EA + + + + A ++E ++ IV I EG+P + ++ A Sbjct: 727 YQTLQEAVQHFPDVSVLINFASMRSAASVTRLALETAPQLRTIVVIAEGVPEREARQLAA 786 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 LIGP G + + +IG +M ++R GSVG +++SG + E Sbjct: 787 ETRARGVCLIGPATVGGIKSGAFRIGNTGGTLENVMNARLYRPGSVGCVTKSGGMLNEMN 846 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S G A+ IGGD GT +D L F + + +V++GE+GG E E + + Sbjct: 847 NILSIVSDGTYEAIAIGGDRFPGTSMLDHLLRFERNPDIKLLVLLGEVGGGMEYEVVEAI 906 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KP++ + G A + GHAGA + A K A+K AG + Sbjct: 907 KDGR---LTKPLIAWCVGTCASLFSTEVSFGHAGAWAGSNREHAVAKNAALKAAGAFVPS 963 Query: 285 SPARIGRSLVELLGSL 300 S +G+S+ + L Sbjct: 964 SFDELGKSIRHVYVQL 979 >gi|154721400|gb|ABS84822.1| ATP citrate lyase [Toxoplasma gondii] Length = 1281 Score = 192 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 23/316 (7%) Query: 5 VDKNTKVLVQGLTGKAG--TFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVPV 58 + T+ V GL +A + A + V ++ + S Y+ V +PV Sbjct: 667 FTEKTRCFVWGLQTRAVQEMLDFDHACGRKKPSVAAILYEFSVSHQRSFYFGTEEVLLPV 726 Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIE--AEIPLIVCITEGIPVLDMVRVKA 115 + T+ EA + + + + A ++E ++ IV I EG+P + ++ A Sbjct: 727 YQTLQEAVQHFPDVSVLINFASMRSAASVTRLALETAPQLRTIVVIAEGVPEREARQLAA 786 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 LIGP G + + +IG +M ++R GSVG +++SG + E Sbjct: 787 ETRARGVCLIGPATVGGIKSGAFRIGNTGGTLENVMNARLYRPGSVGCVTKSGGMLNEMN 846 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S G A+ IGGD GT +D L F + + +V++GE+GG E E + + Sbjct: 847 NILSIVSDGTYEAIAIGGDRFPGTSMLDHLLRFERNPDIKLLVLLGEVGGGMEYEVVEAI 906 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KD KP++ + G A + GHAGA + A K A+K AG + Sbjct: 907 KDGR---LTKPLIAWCVGTCASLFSTEVSFGHAGAWAGSNREHAVAKNAALKAAGAFVPS 963 Query: 285 SPARIGRSLVELLGSL 300 S +G+S+ + L Sbjct: 964 SFDELGKSIRHVYVQL 979 >gi|172037273|ref|YP_001803774.1| putative succinyl-CoA synthetase subunit alpha [Cyanothece sp. ATCC 51142] gi|171698727|gb|ACB51708.1| putative succinyl-CoA synthetase alpha chain [Cyanothece sp. ATCC 51142] Length = 306 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 91/300 (30%), Positives = 154/300 (51%), Gaps = 17/300 (5%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 ++KVL+QG+T G + + + T +V GI T ++P+FT V EA + Sbjct: 6 DSKVLIQGITNPLGISYAAR-MKAKGTNIVAGITL----EEQTAEMDDIPIFTLVEEAVK 60 Query: 68 RTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + S+I PP DA +E++ A I +V +T +P LD++ + + + +++ ++G Sbjct: 61 QIGEIEISLILTPPYEVLDAGLEAMAAGIKQLVIVTSRVPPLDLIALLEQAQVTNTFVLG 120 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 G+L PD +GIM + G VGI+SR L E +Q GLGQS A+ +G D Sbjct: 121 SGSEGLLVPDQFWLGIMEPDFYTAGQVGIISRCDRLMDEVALNLTQAGLGQSLAISLGSD 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 V G+ F L++ DE TE+I+++G+ S E AA+++ + KP++ ++ G Sbjct: 181 AVMGSNFEQWLQIMEEDETTEAIILLGQPYSSPELLAAEYIDSAIE----KPVIAYLPGI 236 Query: 247 TAPPGRTMGHAGAVIS-------GGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 AP R+ G A ++I+ G K I A+K+AG+ IA S I + + + Sbjct: 237 LAPMNRSFGDATSIIASQLSYQRGDKTRENPTITALKKAGVKIANSVEEIPKLTKRIFSN 296 >gi|312370903|gb|EFR19206.1| hypothetical protein AND_22915 [Anopheles darlingi] Length = 891 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 81/271 (29%), Positives = 123/271 (45%), Gaps = 16/271 (5%) Query: 43 KKGSTYWTGGNVNVPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVC 100 K YW V +PV+ ++EA + A+ V + A D+ +E ++ +I I Sbjct: 328 HKQKFYWGHKEVLIPVYAKMSEAIGKHKDADVLVNFASLRSAYDSSMEVLDYPQIRTIAI 387 Query: 101 ITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGS 152 I EGIP ++ + +IGP G L P KIG I+ ++R GS Sbjct: 388 IAEGIPENLTRKLNMAARERQVSIIGPATVGGLKPGCFKIGNTGGMLDNIIHSKLYRAGS 447 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 V +SRSG ++ E S+ G V IGGD GT F+D + + AD A + IV++ Sbjct: 448 VAYVSRSGGMSNELNNIVSRTTDGVYEGVAIGGDRYPGTTFMDHILRYQADPAAKMIVLL 507 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAE 269 GE+GG E E LKD KP+V + G A GHAG+ + + A Sbjct: 508 GEVGGVEEYEVCDALKDGRI---TKPLVAWCIGTCASMFTSEVQFGHAGSCANSDRETAS 564 Query: 270 DKINAMKEAGICIAPSPARIGRSLVELLGSL 300 K A++ AG + S +G + + +L Sbjct: 565 AKNRALETAGAHVPDSFDTLGDMIGSVYDNL 595 >gi|225848356|ref|YP_002728519.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(citrate cleavage enzyme) [Sulfurihydrogenibium azorense Az-Fu1] gi|225643595|gb|ACN98645.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(Citrate cleavage enzyme) [Sulfurihydrogenibium azorense Az-Fu1] Length = 616 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 68/313 (21%), Positives = 130/313 (41%), Gaps = 15/313 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQ-TQVVGGIHPKKG----STYWTGGNVNVP 57 +L D+NTK + L A + + + + + P ++ + +P Sbjct: 7 LLFDRNTKAIFWNLNTNAIQRMLDYDYVVGRSPSIAAIVAPTSERSFEKFFYGTKEIIIP 66 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCI-TEGIPVLDMVRVKA 115 ++ + EA + A+ + + A +E+ E + I EGIP ++ Sbjct: 67 IYKSTKEAAKFHPEADVLLNFASFRTAYPVTLEAFEIPTIRTIIITAEGIPERFARDMRI 126 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + ++ +IGP G + P + +I I+ + R GSVG+++RSG L E Sbjct: 127 KAKQLGKWIIGPATVGGIAPGAFRIANTGGTIENIIASKLHRPGSVGLVTRSGGLFNELS 186 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G + + IGGD G++F+D + F + E ++++GE+GG AE + + + Sbjct: 187 NIIARNADGVAEGIAIGGDRFPGSDFLDHMLRFEKNPQVEFMILLGEVGGEAEYKVVEAV 246 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 K+ K GHAGA + A+ K AM+E GI + + Sbjct: 247 KNGLITKPVIGWCIGTISKFFGGEVQFGHAGAKAGVDRETADAKNRAMREVGIHVPNNFN 306 Query: 288 RIGRSLVELLGSL 300 + + + L Sbjct: 307 ELPHVIKGIYEML 319 >gi|222874517|gb|EEF11648.1| predicted protein [Populus trichocarpa] Length = 203 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 125/202 (61%), Positives = 159/202 (78%), Gaps = 3/202 (1%) Query: 98 IVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILS 157 ++CITEGIP+LDMV+VK L S+S LIGPNCPGI+TP+ CKIGIMPG I ++G +G++S Sbjct: 1 LICITEGIPILDMVQVKRALLSSNSILIGPNCPGIITPEECKIGIMPGYIHKRGHIGVIS 60 Query: 158 RSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 RSGTLTYEAV QT++ GLGQST +GIGGDP+ G F D ++LF+ D T I+M+GEIGG Sbjct: 61 RSGTLTYEAVAQTTEVGLGQSTCIGIGGDPIHGMSFTDCIKLFINDPDTHGIIMIGEIGG 120 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKE 277 S EEEAA+F+K G KP+VGF+AGKTAPPG+ MGHAGA+ SG G AE KI AMK Sbjct: 121 SEEEEAAEFIK---LSGTDKPVVGFIAGKTAPPGKRMGHAGAISSGTSGSAESKIEAMKN 177 Query: 278 AGICIAPSPARIGRSLVELLGS 299 AGI IA +PA IG++++E + + Sbjct: 178 AGIVIAETPAVIGKTMLEAMNN 199 >gi|85111717|ref|XP_964070.1| hypothetical protein NCU09810 [Neurospora crassa OR74A] gi|28925833|gb|EAA34834.1| hypothetical protein NCU09810 [Neurospora crassa OR74A] Length = 646 Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 105/282 (37%), Positives = 161/282 (57%), Gaps = 34/282 (12%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 T + + ++ + T++VGG+ P + TG ++ +PV +V +A E +A+ IYV Sbjct: 28 FQATANAKDSLAW-GTKIVGGVIPGR-----TGEHLGLPVLPSVRQAMEYLKPDATGIYV 81 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTP-D 136 A AI E+IEAE+PLIV + E IPV DM+R+ + L+ +S SRL+GPN PGI++ Sbjct: 82 AAHQAPGAIEEAIEAEVPLIVAVAEHIPVHDMLRIHSMLKTQSKSRLVGPNSPGIISAVG 141 Query: 137 SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 C++ + T++ GLGQS +G+GGD V GT+ ++ Sbjct: 142 KCRVAV-------------------------ASTTRAGLGQSLCIGVGGDMVPGTDMVEA 176 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRTMG 255 L + D TE+I ++GEIGG E EAA ++K+ R + KPI+G +AG PGR +G Sbjct: 177 LSVLEKDPDTEAIALIGEIGGMGELEAAAWIKEYYSRSKSPKPIIGLIAGVNEAPGRILG 236 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 HAGA G+ A+ KI A++EAG+ + PA+IG +L L Sbjct: 237 HAGAFTFLGEPTAKAKIAALEEAGVILVNHPAKIGDTLKTKL 278 >gi|16330972|ref|NP_441700.1| succinyl-CoA synthetase [Synechocystis sp. PCC 6803] gi|1653466|dbj|BAA18380.1| succinyl-CoA synthetase [Synechocystis sp. PCC 6803] Length = 302 Score = 189 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 83/302 (27%), Positives = 144/302 (47%), Gaps = 17/302 (5%) Query: 6 DKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEA 65 K +KVL+QG+ G + EQ + C T++V G+ P G ++PVF V A Sbjct: 4 HKESKVLLQGVHHPLGLTYLEQ-MRSCGTKLVAGVSPGHGGELIG----DLPVFDLVDLA 58 Query: 66 KERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 + + S+I PP DA +E+I A I +V ++ G+P LDM+ + + + + + Sbjct: 59 VKTVGPVDISLILNPPYRVLDAALEAIAAGIRQLVIVSAGVPPLDMITLLREAQATHTLI 118 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +G GI+ P +G + + + G +GI+S LT + S GLGQS + +G Sbjct: 119 LGSGSQGIMIPQQFSVGTLDPNCYLPGPIGIISHCDRLTDDIAQTLSAAGLGQSMVISLG 178 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 D + G+ F L++ DE T +I+++G+ + E AA D +KP+V ++A Sbjct: 179 TDGLNGSNFEQWLQVLEEDEQTATILLLGQPNSNGEMRAA----DYVASAIEKPVVAYLA 234 Query: 245 GKTAPPGRTMGHAGAVISGGKG-------GAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G+ A R G + +++ E + A + A I +A +P + L + Sbjct: 235 GRGAKIKRHFGDSLTIVANQLSHKRPLLTSVEQTVQAFENANIPVAEAPWELPIFLPLAM 294 Query: 298 GS 299 S Sbjct: 295 ES 296 >gi|224372753|ref|YP_002607125.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) [Nautilia profundicola AmH] gi|223589182|gb|ACM92918.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) [Nautilia profundicola AmH] Length = 615 Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 134/316 (42%), Gaps = 22/316 (6%) Query: 4 LVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVNVP 57 L ++T+ + + + I + V + P K ++ V +P Sbjct: 5 LFTRDTQAIFWNNNKSAIQRMLDYDYIIQREKPSVAAIVAPTSSNKFEKFFFGTDEVMIP 64 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKA 115 ++ + EA + A+ + + A D ++++ + +I+ EGIP + + Sbjct: 65 IYRSTEEAVKNHPNADVLLNFASFRTAYDVTMDALAMDQFRVIMITAEGIPERNARIMNK 124 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + +IGP G + P + K+ I+ + R GS G+++RSG L E Sbjct: 125 TAREKGVTIIGPATVGAIAPGAFKVANIGGTIENIVKSKLHRAGSAGLVTRSGGLFNELS 184 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 + G + V IGGD G+ F+D + + + ++++GE+GG E + + + Sbjct: 185 NIIALNADGIAEGVAIGGDRFVGSVFLDHMLRMEKNPKVKYMILLGEVGGREEYKVIEAI 244 Query: 228 KDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K+ KP++G+ G A G GHAGA + + AE K AMKEAGI + Sbjct: 245 KEGKI---TKPVIGWCIGTIAKHFSSGVQFGHAGASANADEETAEAKNRAMKEAGIHVPA 301 Query: 285 SPARIGRSLVELLGSL 300 + + + + L Sbjct: 302 NFNELPDVIRGVYEQL 317 >gi|124515909|gb|EAY57418.1| Succinyl-CoA synthetase, alpha subunit [Leptospirillum rubarum] Length = 328 Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats. Identities = 92/309 (29%), Positives = 154/309 (49%), Gaps = 21/309 (6%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +++ T ++V G TG+ + ++ V G+ P KG + + VPVF T+ Sbjct: 5 VYLNEKTGIVVIGATGREASQVIRESEALYPGIVKAGVTPGKGGST----ELPVPVFDTL 60 Query: 63 AEAKERTAA----NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 ++A + N ++IYVPP DA++E ++ I +I ITE +P+ D + Sbjct: 61 SQAVQDPKVGKSINTALIYVPPVSVLDAVMECLDGGIKVIYIITEHVPIRDSEIIYQEKV 120 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + + ++G G P +IG + P F+ G + I+S+SG LT + G Sbjct: 121 RRGAVIVGGTSLGCFVPSVGRIGAVGGKDPSIAFKAGGLVIISKSGGLTVTTAEMFRRRG 180 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 G A+ IGGD + T + DVL+ D + +VM+GE GGS EE+AA+ ++ G Sbjct: 181 WGTYCALAIGGDIISNTTYADVLKELKDDPNVKGVVMLGEPGGSYEEQAAELIQA---GG 237 Query: 235 RKKPIVGFVAGKT---APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 KP+ F++G+ P G GHAGA++ G G A DKI ++ AG P ++ Sbjct: 238 FNKPVAAFISGRFQERMPEGVAFGHAGAIVERGMGKASDKIARLEAAG---KKHPVKVAF 294 Query: 292 SLVELLGSL 300 EL+ ++ Sbjct: 295 YYHELVSAI 303 >gi|168016926|ref|XP_001760999.1| predicted protein [Physcomitrella patens subsp. patens] gi|162687685|gb|EDQ74066.1| predicted protein [Physcomitrella patens subsp. patens] Length = 610 Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats. Identities = 75/315 (23%), Positives = 133/315 (42%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L + T+ L + + V G I+P ++ + VPV Sbjct: 6 LFSRTTQALFYNYKQSPVQRMLDFDFLCGRETPSVAGVINPGSDGFQKLFFGQEEIAVPV 65 Query: 59 FTTVAEAKE-RTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 ++ A + A+ + + A + +E++ ++ I ++ I EG+P D R+ A Sbjct: 66 HGSIPSACKVHPTADVFINFASFRSAYASSMEALKQSTIRVVAIIAEGVPEADAKRLIAY 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 ARANNKVVIGPATVGGIQAGAFKIGDTAGTLDNIIHCKLYRPGSVGFVSKSGGMSNEMYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + IV++GE+GG E LK Sbjct: 186 VLARVTDGLYEGIAIGGDVYPGSTLSDHVLRFNNIPQIKMIVVLGELGGKDEYSLVDALK 245 Query: 229 DEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + + KP+V +V+G A GHAGA G + A+ K A+ +AG + S Sbjct: 246 E---KKVSKPVVAWVSGTCARLFKSEVQFGHAGAKSGGDEESAQAKNKALADAGAIVPTS 302 Query: 286 PARIGRSLVELLGSL 300 + + S+ Sbjct: 303 FEGLEAVVKATYDSM 317 >gi|281202364|gb|EFA76569.1| ATP citrate synthase [Polysphondylium pallidum PN500] Length = 626 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 135/318 (42%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGL--TGKAGTFHTEQAILYCQTQVVGGIHPK-KGSTY---WTGGNVN 55 + L K ++ L+ + V G IHP +G Y + + Sbjct: 21 ARLFTKQSQALIYNYKEAAVQRMLDFDNVSQRDTPSVAGLIHPGAEGGFYKAFFGFKELV 80 Query: 56 VPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PV+ ++A+A E A+ + + A + ++++ I +V I EG+P + + Sbjct: 81 IPVYNSIADACESCPNADVFLNFASHRSAYQSSVKALNQPSIRTVVIIAEGVPENEARAL 140 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 A +K++ +IGP G + + KIG IM ++R GSVG +S+SG L+ E Sbjct: 141 IALAKKNNKVIIGPATVGGIQAGAFKIGNTAGTIDNIMACKLYRSGSVGFVSKSGGLSNE 200 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G + IGGD G+ D F + IV++GE+GG E + Sbjct: 201 MYNVLSKNTDGIYEGIAIGGDAFPGSTLTDHALRFEKLLEVKMIVILGELGGWDEYGIVE 260 Query: 226 FLKDEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 LK KP+ +V+G A P GHAGA G AE K A+K AG + Sbjct: 261 ALKSGQI---TKPVCAWVSGTVARIFPTEVQFGHAGAKSGGETESAEAKNAALKGAGAIV 317 Query: 283 APSPARIGRSLVELLGSL 300 S + + G L Sbjct: 318 PSSFEDFANVIADTYGKL 335 >gi|78776770|ref|YP_393085.1| ATP-dependent citrate lyase alpha subunit [Sulfurimonas denitrificans DSM 1251] gi|78497310|gb|ABB43850.1| ATP-dependent citrate lyase alpha subunit [Sulfurimonas denitrificans DSM 1251] Length = 604 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 79/319 (24%), Positives = 133/319 (41%), Gaps = 22/319 (6%) Query: 1 MSILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNV 54 M+ L ++T+ + + I + V + P ++ + Sbjct: 1 MAQLYTRDTQAIFWNNNASAIQRMLDYDYTIKRQKPSVAAIVAPTSNSKFDKFFYGPDEI 60 Query: 55 NVPVF-TTVAEAKERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVR 112 +P++ T + A+ + + A D +E++E I+ EGIP + Sbjct: 61 MIPLYRNTTEAKSAQPQADVLLNFASFRTAYDVTMEALELGGFTSIMVTAEGIPERLARK 120 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTY 164 + A + + +IGP G + P + KI I+ + R GS G+++RSG L Sbjct: 121 MNATGREKNVTIIGPATVGAIAPGAFKIANIGGTIENIVQSKLHRAGSCGLVTRSGGLFN 180 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E + G + V IGGD G+ FID L A+ + ++++GE+GG+ E + Sbjct: 181 ELSNIIAINADGIAEGVAIGGDRFVGSVFIDNLLRMEANPEVKYMLLLGEVGGTEEYKVI 240 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 + +K KKPI+ + G A G GHAGA +G AE K AMKE GI Sbjct: 241 EAVK---SGKIKKPIIAWCIGTIAKYYDSGVQFGHAGASANGDMETAEAKNRAMKEVGIH 297 Query: 282 IAPSPARIGRSLVELLGSL 300 + S + + L L Sbjct: 298 VPASFNDLPEIISALYHEL 316 >gi|302769203|ref|XP_002968021.1| hypothetical protein SELMODRAFT_169564 [Selaginella moellendorffii] gi|300164759|gb|EFJ31368.1| hypothetical protein SELMODRAFT_169564 [Selaginella moellendorffii] Length = 611 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 76/315 (24%), Positives = 136/315 (43%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L + T+ L + + V G ++P ++ + VPV Sbjct: 6 LFSRTTQALFYNYKQSPVQRMLDYDFLCGREIPSVAGIVNPGSDGFQKLFFGQEEIAVPV 65 Query: 59 FTTV-AEAKERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 + +V A + A+ + + A + ++++ ++ I +IV I EG+P D ++ A Sbjct: 66 YGSVQAACRAHPVADVFINFASFRSAFQSSMDALKQSTIRVIVIIAEGVPEADTKKLIAF 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 + +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 AALNHKVVIGPATVGGIQAGAFKIGDTAGTLENIIQSKLYRPGSVGFVSKSGGMSNEMYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + IV++GE+GG E + LK Sbjct: 186 VIARVTDGLYEGIAIGGDVYPGSTLSDHVLRFNNIPQIKMIVVLGELGGRDEYSLVEALK 245 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + KP+V +V+G A + GHAGA G A+ K A++EAG + S Sbjct: 246 ---QGKVTKPVVAWVSGTCAKLFKSEVQFGHAGAKSGGDMESAQGKNKALQEAGAIVPTS 302 Query: 286 PARIGRSLVELLGSL 300 + ++ + L Sbjct: 303 YEGLESAVKGVYDKL 317 >gi|206602153|gb|EDZ38635.1| Succinyl-CoA synthetase, alpha subunit [Leptospirillum sp. Group II '5-way CG'] Length = 328 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 91/309 (29%), Positives = 154/309 (49%), Gaps = 21/309 (6%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + +++ T ++V G TG+ + ++ V G+ P KG + + VPVF T+ Sbjct: 5 VYLNEKTGIVVIGATGREASQVIRESEALYPGIVKAGVTPGKGGST----ELPVPVFDTL 60 Query: 63 AEAKERTAA----NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 ++A + N ++IYVPP DA++E ++ + +I ITE +P+ D + Sbjct: 61 SQAVQDPKVGQSINTALIYVPPVSVLDAVMECLDGGMKVIYIITEHVPIRDSEIIYQEKV 120 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + + ++G G P +IG + P F+ G + I+S+SG LT + G Sbjct: 121 RRGAVIVGGTSLGCFVPSVGRIGAIGGKDPSIAFKAGGLVIISKSGGLTVTTAEMFRRRG 180 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 G A+ IGGD + T + DVL+ D + +VM+GE GGS EE+AA+ ++ G Sbjct: 181 WGTYCALAIGGDIISNTTYADVLKELKDDPNVKGVVMLGEPGGSYEEQAAELIQA---GG 237 Query: 235 RKKPIVGFVAGKT---APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 KP+ F++G+ P G GHAGA++ G G A DKI ++ AG P ++ Sbjct: 238 FNKPVAAFISGRFQERMPEGVAFGHAGAIVERGMGKASDKIARLEAAG---KKHPVKVAF 294 Query: 292 SLVELLGSL 300 EL+ ++ Sbjct: 295 YYHELVSAI 303 >gi|168012925|ref|XP_001759152.1| predicted protein [Physcomitrella patens subsp. patens] gi|162689851|gb|EDQ76221.1| predicted protein [Physcomitrella patens subsp. patens] Length = 610 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 76/315 (24%), Positives = 131/315 (41%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L + T+ L + V G I+P ++ + VPV Sbjct: 6 LFSRTTQALFYNYKPSPVQRMLDFDFLCGRETPSVAGVINPGSDGFQKLFFGQEEIAVPV 65 Query: 59 FTTVAEAKE-RTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 ++ A + A+ + + A + +E++ + I ++ I EG+P D R+ A Sbjct: 66 HGSIPSACKIHPTADVFINFASFRSAYASSMEALKQPTIRVVAIIAEGVPEADAKRLIAF 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 ARANNKVVIGPATVGGIQAGAFKIGDTAGTLDNIIHCKLYRPGSVGFVSKSGGMSNEMYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + IV++GE+GG E LK Sbjct: 186 VLARVTDGLYEGIAIGGDVYPGSTLSDHVLRFNNIPQIKMIVVLGELGGRDEYSLVDALK 245 Query: 229 DEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + KP+V +V+G A GHAGA G + A+ K A+ +AG + S Sbjct: 246 EGKVG---KPVVAWVSGTCARLFKSEVQFGHAGAKSGGDEESAQAKNKALADAGAIVPTS 302 Query: 286 PARIGRSLVELLGSL 300 + ++ SL Sbjct: 303 FEGLEATVKATYDSL 317 >gi|66816585|ref|XP_642302.1| ATP citrate synthase [Dictyostelium discoideum AX4] gi|74856657|sp|Q54YA0|ACLY_DICDI RecName: Full=Probable ATP-citrate synthase; AltName: Full=ATP-citrate (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme gi|60470365|gb|EAL68345.1| ATP citrate synthase [Dictyostelium discoideum AX4] Length = 622 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 83/318 (26%), Positives = 132/318 (41%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGL--TGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTY---WTGGNVN 55 + L K ++ L+ + V G IHP G Y + + Sbjct: 17 ARLFTKQSQALIYNYKEAAVQRMLDFDNVSQRDTPSVGGLIHPGSDGGMYKAFFGFKELV 76 Query: 56 VPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRV 113 +PV+ +V+EA ++ A+ + + A + + ++ E I +V I EG+P + + Sbjct: 77 IPVYNSVSEACQQCPNADVFLNFASHRSAYQSSLLALREPSIQTVVIIAEGVPENEARSL 136 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + +K +IGP G + KIG IM ++R GSVG +S+SG L+ E Sbjct: 137 ISIAKKLGKVIIGPATVGGIQAGCFKIGNTAGTIVYIMACKLYRSGSVGFVSKSGGLSNE 196 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G + IGGD G+ D + + IV++GE+GG E + Sbjct: 197 MYNVLSRCTDGIYEGIAIGGDAFPGSTLTDHALRYEKLPEVQMIVILGELGGWDEYGIVE 256 Query: 226 FLKDEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 LK K KPI +V+G A P GHAGA G A+ K A++EAG + Sbjct: 257 ALK---KGEITKPICAWVSGTVAKIFPTEVQFGHAGAKSGGETESADAKNKALREAGAVV 313 Query: 283 APSPARIGRSLVELLGSL 300 S + L Sbjct: 314 PTSFEDFSNVIAATYAKL 331 >gi|302821521|ref|XP_002992423.1| hypothetical protein SELMODRAFT_162315 [Selaginella moellendorffii] gi|300139839|gb|EFJ06573.1| hypothetical protein SELMODRAFT_162315 [Selaginella moellendorffii] Length = 611 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 76/315 (24%), Positives = 136/315 (43%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L + T+ L + + V G ++P ++ + VPV Sbjct: 6 LFSRTTQALFYNYKQSPVQRMLDYDFLCGREIPSVAGIVNPGSDGFQKLFFGQEEIAVPV 65 Query: 59 FTTV-AEAKERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 + +V A + A+ + + A + ++++ ++ I +IV I EG+P D ++ A Sbjct: 66 YGSVQAACRAHPVADVFINFASFRSAFQSSMDALKQSTIRVIVIIAEGVPEADTKKLIAF 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 + +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 AALNHKVVIGPATVGGIQAGAFKIGDTAGTLENIIQSKLYRPGSVGFVSKSGGMSNEMYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + IV++GE+GG E + LK Sbjct: 186 VIARVTDGLYEGIAIGGDVYPGSTLSDHVLRFNNIPQIKMIVVLGELGGRDEYSLVEALK 245 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + KP+V +V+G A + GHAGA G A+ K A++EAG + S Sbjct: 246 ---QGKVTKPVVAWVSGTCAKLFKSEVQFGHAGAKSGGDMESAQGKNKALQEAGAIVPTS 302 Query: 286 PARIGRSLVELLGSL 300 + ++ + L Sbjct: 303 YEGLESAVKGVYDKL 317 >gi|298707507|emb|CBJ30109.1| atp-citrate synthase [Ectocarpus siliculosus] Length = 1098 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 80/313 (25%), Positives = 129/313 (41%), Gaps = 23/313 (7%) Query: 8 NTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPVFTT 61 +T +V GL + G + + V + P G YW +PV+T+ Sbjct: 496 DTTAIVYGLQNRAVQGMLDFDFMCKREKPSVACMVFPFSGNHYIKFYWGTAETLIPVYTS 555 Query: 62 VAEAKERTA-ANASVIYVPPSGAGDAIIESIEAE--IPLIVCITEGIPVLDMVRVKARLE 118 +AEA +R + V + + ++++ I + I EG+P + + Sbjct: 556 IAEAVKRHPTVSVMVNFSSFRSVYETTMDALNYSDTIKTLAIIAEGVPESQTREIIKAAD 615 Query: 119 KSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 + LIGP G + P +IG I+ ++R G+V +S+SG ++ E Sbjct: 616 EKKVGLIGPATVGGIKPGCMRIGNTGGMLDNIVMSKLYRPGTVAYVSKSGGMSNELNNII 675 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 ++ G V IGGD GT FID L + + +V++GE+GG+ E + LK Sbjct: 676 ARNSDGVFEGVAIGGDRYPGTRFIDHLLRYQDNPTVSMLVLLGEVGGADEYDVCDALKSG 735 Query: 231 AKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 KP+V + G A P GHAGA G A DK A+ AG + S Sbjct: 736 RI---TKPVVAWCIGTCASIFPFEVQFGHAGACARGQGETAADKNAALAAAGAVVPVSFD 792 Query: 288 RIGRSLVELLGSL 300 + E+ L Sbjct: 793 EFPSKIKEVFDGL 805 >gi|149195271|ref|ZP_01872360.1| ATP-citrate lyase/succinyl-CoA ligase [Caminibacter mediatlanticus TB-2] gi|149134613|gb|EDM23100.1| ATP-citrate lyase/succinyl-CoA ligase [Caminibacter mediatlanticus TB-2] Length = 615 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 72/318 (22%), Positives = 136/318 (42%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHP----KKGSTYWTGGNVN 55 + L ++T+ + + + I + V + P K ++ V Sbjct: 3 NRLFTRDTQAIFWNNNKSAIQRMLDYDYVIQREKPSVAAIVAPTSSNKFEKFFFGTDEVM 62 Query: 56 VPVFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRV 113 +P++ + A+A + A+ + + A D E+++ + +I+ EGIP + Sbjct: 63 IPIYKSTADAVKNHPNADVLLNFASFRTAYDVTNEALDMDQFRVIMITAEGIPERLARLM 122 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + + +IGP G ++P + K+ I+ + R GS G+++RSG L E Sbjct: 123 NKKAREKGVTIIGPATVGAISPGAFKVANIGGTIENIVKSKLHRAGSAGLVTRSGGLFNE 182 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + G + V IGGD G+ FID + + + +V++GE+GG E + + Sbjct: 183 LSNIIALNADGIAEGVAIGGDRFVGSTFIDHMLRMEKNPDVKYMVLLGEVGGREEYKIIE 242 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +K+ KP++ + G A G GHAGA + + AE K AM+EAGI + Sbjct: 243 AIKEGKI---TKPVIAWCIGTIAKHFSSGVQFGHAGASANAEEETAEAKNRAMREAGIHV 299 Query: 283 APSPARIGRSLVELLGSL 300 + + + + L Sbjct: 300 PDNFNDLPHVIKGVYEQL 317 >gi|328867681|gb|EGG16063.1| ATP citrate synthase [Dictyostelium fasciculatum] Length = 635 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 135/318 (42%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGL--TGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTY---WTGGNVN 55 + L K ++ L+ + V G IHP G Y + + Sbjct: 25 ARLFSKQSQALIYNYKEAAVQRMLDFDNVSQRDTPSVAGLIHPGSDGGFYKAFFGFKELV 84 Query: 56 VPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRV 113 +PVF +V EA + A+ + + A + +++I E + IV I EG+P + + Sbjct: 85 IPVFNSVKEACQACPNADVFLNFASHRSAFGSSVKAIQEPTLRTIVIIAEGMPENEARSL 144 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + +K+ +IGP G + + KIG I+ ++R GSVG +S+SG L+ E Sbjct: 145 ISMAKKNGKVIIGPATVGGIQAGAFKIGNTAGTIDNILACKLYRSGSVGFVSKSGGLSNE 204 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G + IGGD G+ D + F + IV++GE+GG E Sbjct: 205 MYNVLSRTTDGIYEGIAIGGDAFPGSTLTDHVTRFEKLPEVKMIVILGELGGWDEYGVVD 264 Query: 226 FLKDEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 LK + KP+ +V+G A P GHAGA G AE K A+KEAG + Sbjct: 265 ALK---RGEITKPVCAWVSGTVAKIFPTEVQFGHAGAKSGGESESAEMKNKALKEAGAIV 321 Query: 283 APSPARIGRSLVELLGSL 300 S ++ + L Sbjct: 322 PQSFEDFSNAISQTYNKL 339 >gi|307153609|ref|YP_003888993.1| CoA-binding domain-containing protein [Cyanothece sp. PCC 7822] gi|306983837|gb|ADN15718.1| CoA-binding domain protein [Cyanothece sp. PCC 7822] Length = 296 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 93/300 (31%), Positives = 152/300 (50%), Gaps = 17/300 (5%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 N+ VL+QG+T + + + T +V G+ G N+P+F V EA Sbjct: 6 NSTVLIQGMTSPFALAYVPRLKSF-GTNIVAGVSVGAGGQQI----ANIPIFDLVEEAIA 60 Query: 68 RTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + S+I+V P DA +E+I A I I+ IT G+P LDMV + + + +++ ++G Sbjct: 61 NVGKIDISLIFVEPYQVLDAALEAIAAGIEQIIIITRGVPPLDMVDLLKKSQVNNTFILG 120 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 GI+ PD +GI +R G VG++SRS LT E S GQS AV +G D Sbjct: 121 SGSQGIIIPDKLWLGIGEPQCYRAGKVGLISRSDRLTDEIALILSASKYGQSMAVSLGTD 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + G F L++ D+ T++IV++G+ GSAE AA+++ + KP++ ++AG Sbjct: 181 GIIGASFEQWLQILEEDDGTDAIVLLGQANGSAEFSAAEYIASSIE----KPVIAYIAGA 236 Query: 247 TAPPGRTMGHAGAVISGGKG-------GAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++ R+ G A +I+ + + A KEA I +A SP +I + + L S Sbjct: 237 SSSVKRSFGDAATIIATQLSYSLPITRTEQQLLTAFKEANITVAKSPFQIPSLVKKALKS 296 >gi|330796396|ref|XP_003286253.1| hypothetical protein DICPUDRAFT_91676 [Dictyostelium purpureum] gi|325083758|gb|EGC37202.1| hypothetical protein DICPUDRAFT_91676 [Dictyostelium purpureum] Length = 621 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 85/318 (26%), Positives = 134/318 (42%), Gaps = 22/318 (6%) Query: 2 SILVDKNTKVLVQGL--TGKAGTFHTEQAILYCQTQVVGGIHPKK-GSTY---WTGGNVN 55 + L K ++ L+ + V G IHP G Y + + Sbjct: 9 ARLFTKQSQALIYNYKEAAVQRMLDFDNVSQRDTPSVAGLIHPGSDGGLYKAFFGFKELV 68 Query: 56 VPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRV 113 +PV+ +V+EA ++ A+ + + A + + ++ E I +V I EG+P + + Sbjct: 69 IPVYNSVSEACQQCPNADVFLNFASHRSAYQSSLLALREPSIRTVVIIAEGVPENEARSL 128 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 A +K+ +IGP G + S KIG IM ++R GSVG +S+SG L+ E Sbjct: 129 IAIAKKAGKVIIGPATVGGIQAGSFKIGNTAGTIDNIMACKLYRSGSVGFVSKSGGLSNE 188 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 S+ G + IGGD G+ D F + IV++GE+GG E Sbjct: 189 MYNVLSRCTDGIYEGIAIGGDAFPGSTLTDHALRFEKLPEVKMIVVLGELGGWDEYGIVD 248 Query: 226 FLKDEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 LK K KPI +V+G A P GHAGA G A+ K N++++AG + Sbjct: 249 ALK---KGEITKPICAWVSGTVAKIFPTEVQFGHAGAKSGGETESADAKNNSLRDAGAIV 305 Query: 283 APSPARIGRSLVELLGSL 300 S + L Sbjct: 306 PTSFEDFSNVIAATYAKL 323 >gi|289616472|emb|CBI56787.1| unnamed protein product [Sordaria macrospora] Length = 625 Score = 185 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 105/282 (37%), Positives = 158/282 (56%), Gaps = 34/282 (12%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 T + + ++ + T++VGG+ P + TG ++ +PV +V +A E+ +A+ IYV Sbjct: 8 FQATANAKDSLAW-GTKIVGGVTPGR-----TGEHIGLPVLPSVRQAMEQLKPDATAIYV 61 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSRLIGPNCPGILTP-D 136 A AI E+IEAE+PLIV + E IPV DM+R+ + L+ +S SRL+GPN PGI++ Sbjct: 62 AAHQAPGAIEEAIEAEVPLIVAVAEHIPVHDMLRIHSILKTQSKSRLVGPNSPGIISAVG 121 Query: 137 SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 C+I + T++ GLGQS +G+GGD GT+ ++ Sbjct: 122 KCRIAV-------------------------ASTTRAGLGQSLCIGVGGDMAPGTDMVEA 156 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRTMG 255 L + D TE+I ++GEIGG+ E EAA ++K+ R KPIVG +AG PG MG Sbjct: 157 LSVLEKDPDTEAIALIGEIGGTGELEAAAWIKEYYSRSESPKPIVGLIAGVNEAPGHIMG 216 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 HAGA G+ A+ KI ++EAG+ + PA+IG L L Sbjct: 217 HAGAFTFLGEPTAKAKITELEEAGVTLVNHPAKIGDILKAKL 258 >gi|218246042|ref|YP_002371413.1| CoA-binding domain-containing protein [Cyanothece sp. PCC 8801] gi|257059088|ref|YP_003136976.1| CoA-binding protein [Cyanothece sp. PCC 8802] gi|218166520|gb|ACK65257.1| CoA-binding domain protein [Cyanothece sp. PCC 8801] gi|256589254|gb|ACV00141.1| CoA-binding domain protein [Cyanothece sp. PCC 8802] Length = 298 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 79/295 (26%), Positives = 151/295 (51%), Gaps = 17/295 (5%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 ++KVL+QG++ G H + T +V GI T ++P+F V +A Sbjct: 6 DSKVLIQGISTPLGA-HYGARMKAFGTNIVAGISLDG----ETPDIKDLPIFNLVEQAIA 60 Query: 68 RTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + + S+I+ PP DA +E++ A I ++ I+ +P LDM+ + + E +++ ++G Sbjct: 61 QVGEIDISLIFTPPYSVLDAALEAMTAGIQQLIIISSEVPPLDMLTILRQAEATNTFILG 120 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P G++ P++ +GI + G+VGI+SR L E + + GQS AV +G + Sbjct: 121 PGSQGLIVPNTIWLGICEPQFYTPGAVGIISRGDRLLDEVARELTLNKFGQSLAVSLGTN 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 V G+ F L++ D+AT+ IV++G+ SAE AA+++ + KP++ ++ G Sbjct: 181 WVIGSNFEQWLQVMEEDDATQVIVLLGQANSSAEVAAAEYIASAIE----KPVIAYITGL 236 Query: 247 TAPPGRTMGHAGAVISGGK-------GGAEDKINAMKEAGICIAPSPARIGRSLV 294 AP R+ A +++ ++ + A+K+A + +A P+ I + + Sbjct: 237 YAPIERSFRDAKTIVTTQLVSSSPQISTDQNVLTALKKARVKLAQRPSEIPKLVK 291 >gi|5304835|emb|CAB46076.1| ATP citrate lyase [Cyanophora paradoxa] Length = 524 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 84/319 (26%), Positives = 139/319 (43%), Gaps = 25/319 (7%) Query: 1 MSILVDKNTKVLVQGL--TGKAGTFHTEQAILYCQTQVVGGIHPK-KGST---YWTGGNV 54 M+ L ++T+ L+ + V G I+ KG ++ + Sbjct: 6 MAQLFSRSTQALIFNYKPNPVQRMLDFDFLARRETPSVAGLINVGSKGGFEKVFFGTKEI 65 Query: 55 NVPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMVR 112 VPV+ + +A A+ + + A + +E++E I ++V I EG+P D+ + Sbjct: 66 AVPVYASTQDAVRAHPNADVFINFASFRSAYQSSLEALEIPSIRVVVIIAEGVPEGDVKK 125 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTY 164 + A +K +IGP G + + KIG I+ + R GSVG +S+SG L+ Sbjct: 126 LIAVSKKKGKIIIGPATVGGVQAGAFKIGDTAGTVDNIISCKLHRPGSVGFVSKSGGLSN 185 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E S+ G + +GGD GT D + F IV++GE+GG+ E E Sbjct: 186 ECYNILSRTTDGLFEGIAVGGDAFPGTTLADHVIRFQHIPQ---IVVLGELGGTDEYEIV 242 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 + +K K KPI V+G A P GHAGA G AE K A+++AG Sbjct: 243 EAMK---KGVITKPICAGVSGTCAKVFPSEVQFGHAGAKSGGMAESAEAKNQALRDAGAH 299 Query: 282 IAPSPARIGRSLVELLGSL 300 + S + ++ ++ L Sbjct: 300 VPTSFEELPDTIGKVYKDL 318 >gi|251772179|gb|EES52749.1| Succinyl-CoA synthetase, alpha subunit [Leptospirillum ferrodiazotrophum] Length = 327 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 91/310 (29%), Positives = 155/310 (50%), Gaps = 22/310 (7%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ T ++V G TG+ + +++ V GI P KG + + VPVF T Sbjct: 4 TVYLNDKTGIVVIGATGREASQVIKESEALYPGIVKAGITPGKGGST----ELPVPVFDT 59 Query: 62 VAEAKERTAA----NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 +AEA + N ++IYVPP DA++E ++ I ++ ITE +P+ D + Sbjct: 60 LAEAVKDPKVGKLLNTALIYVPPVSVLDAVMECLDNGIKVLYIITEHVPIRDSQIIYQEK 119 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 E+ + ++G G P +IG + P F+ G + ++S+SG LT + Sbjct: 120 ERRGAIIVGGTSLGCFVPSVGRIGAIGGKDPSVAFKDGGIVVISKSGGLTVTTAEMFKRR 179 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G G A+ IGGD + T + DVL+ D +++VM+GE GG+ EE+ A + Sbjct: 180 GWGTYMALAIGGDIISNTTYADVLKQIKGDPKVKAVVMLGEPGGAYEEQVADLI---TSG 236 Query: 234 GRKKPIVGFVAGKT---APPGRTMGHAGAVISGGKGGAEDKINAMKEAG----ICIAPSP 286 G KP+ F++G+ P G GHAGA++ G G A DKI+ ++ AG + +A Sbjct: 237 GFDKPVAAFISGRFQERMPEGVAFGHAGAIVERGMGKATDKISRLEAAGKKFPVKVAFYY 296 Query: 287 ARIGRSLVEL 296 + +++ L Sbjct: 297 HDLVKAIESL 306 >gi|157364315|ref|YP_001471082.1| CoA-binding domain-containing protein [Thermotoga lettingae TMO] gi|157314919|gb|ABV34018.1| CoA-binding domain protein [Thermotoga lettingae TMO] Length = 278 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 92/290 (31%), Positives = 154/290 (53%), Gaps = 13/290 (4%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 + K+ +V V G+TGK G+ HT + Y T ++ G+ +K +PV+ T+ Sbjct: 1 MFCKSDRVCVYGITGKYGSHHTIKMKNY-GTNIICGVSKRK-----ITEFEGIPVYKTLK 54 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 EAKE + ++I+VP +A ++++E I IV I+E +P+ D +++ +K + Sbjct: 55 EAKE--NPDTAIIFVPKEEVLNAFLDAVENSIKKIVIISEHVPIHDALKITKISKKLGIK 112 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPNCPG++ P K+GIMP F+ G ++SRSGTL YE S+ G A+G+ Sbjct: 113 VVGPNCPGVIVPGEVKVGIMPEKYFKPGEFALISRSGTLMYEIARIISKA-DGIKIAMGL 171 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GGDPV GT + + + ++++GEIGG+ E +K ++G I F Sbjct: 172 GGDPVVGTNVAEAFDEIEN-MSIRKVMVIGEIGGNDEVNG---IKYAREKGFDGEIFSFF 227 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 AG+ AP G MGHAGA+I G G + K +++ + + + + Sbjct: 228 AGRYAPEGVRMGHAGAIIEGESGRVQYKEEKLRQYDVKTIRNLFELEKIF 277 >gi|126659213|ref|ZP_01730351.1| succinyl-CoA synthetase [Cyanothece sp. CCY0110] gi|126619518|gb|EAZ90249.1| succinyl-CoA synthetase [Cyanothece sp. CCY0110] Length = 305 Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats. Identities = 92/299 (30%), Positives = 151/299 (50%), Gaps = 16/299 (5%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 ++KVL+QG+T G + + + T +V GI ++P+FT V EA + Sbjct: 6 DSKVLIQGITNPLGISYAGR-MKAQGTNIVAGITL----EEQIDQIDDIPIFTLVEEAVK 60 Query: 68 RTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + S+I PP DA +E++ A I +V +T +P LD++ + + + ++S ++G Sbjct: 61 TVGEIDISLILTPPYEVLDAGLEAMAAGIKQLVIVTSWVPPLDLIALLEQAQVTNSFVLG 120 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 G+L P+ +GIM + G VG++SR L E SQ GLGQS A+ +G D Sbjct: 121 SGSEGLLVPEQFWLGIMEPEFYTTGPVGMISRCDRLMDEVAKTLSQAGLGQSLAISLGCD 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 V G+ F L++ DE TE+IV++G SAE AAQ++ + KP++ ++ G Sbjct: 181 AVMGSNFEQWLQIMEEDETTEAIVLLGHPYSSAELLAAQYIGSAIE----KPVIAYLPGI 236 Query: 247 TAPPGRTMGHAGAVIS------GGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 AP R G A ++I+ GK I A K+AG+ +A + I + + S Sbjct: 237 QAPINRNFGDATSIIASQLSYQTGKTNENQTITAFKKAGVKMANTIEDITKLTKGVFSS 295 >gi|281414577|ref|ZP_06246319.1| succinyl-CoA synthetase subunit alpha [Micrococcus luteus NCTC 2665] Length = 227 Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats. Identities = 113/230 (49%), Positives = 152/230 (66%), Gaps = 15/230 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++K++KV+VQG+TG GT HT + +L T +VGG++ +K T G V Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHT-RLMLKAGTNIVGGVNARKAGTTVSHEDKDGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV EA E+T A+ SV +VPP+ A DA IE+IEAEIPL+V ITEGIPV D + A Sbjct: 60 LPVFGTVKEAMEKTGADVSVAFVPPAFAKDAAIEAIEAEIPLLVVITEGIPVQDTAKFFA 119 Query: 116 RLE-------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + K +R+IGPNCPG++TP GI P +I G +G++S+SGTLTY+ ++ Sbjct: 120 LSQSKTGEDGKPKTRIIGPNCPGVITPGEALAGITPATITGSGPIGLVSKSGTLTYQMMY 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGS 218 + G STA+GIGGDP+ GT ID LE F AD T++IVM+GEIGG Sbjct: 180 ELRD--FGFSTAIGIGGDPIIGTTHIDALEAFEADPDTQAIVMIGEIGGD 227 >gi|289705918|ref|ZP_06502296.1| succinate-CoA ligase, alpha subunit [Micrococcus luteus SK58] gi|289557364|gb|EFD50677.1| succinate-CoA ligase, alpha subunit [Micrococcus luteus SK58] Length = 218 Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats. Identities = 104/213 (48%), Positives = 137/213 (64%), Gaps = 15/213 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++K++KV+VQG+TG GT HT + +L T +VGG++ +K T G V Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHT-RLMLKAGTNIVGGVNARKAGTTVSHEDKDGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF TV EA E+T A+ SV +VPP+ A DA IE+IEAEIPL+V ITEGIPV D A Sbjct: 60 LPVFGTVKEAMEKTGADVSVAFVPPAFAKDAAIEAIEAEIPLLVVITEGIPVQDSAEFFA 119 Query: 116 RLE-------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + K +R+IGPNCPGI+TP GI P +I G +G++S+SGTLTY+ ++ Sbjct: 120 LSQSKTGEDGKPKTRIIGPNCPGIITPGEALAGITPATITGTGPIGLVSKSGTLTYQMMY 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFL 201 + G STA+GIGGDPV GT ID LE F Sbjct: 180 ELRD--FGFSTAIGIGGDPVIGTTHIDALEAFE 210 >gi|256072375|ref|XP_002572511.1| ATP-citrate synthase [Schistosoma mansoni] gi|238657671|emb|CAZ28743.1| ATP-citrate synthase, putative [Schistosoma mansoni] Length = 1164 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 87/364 (23%), Positives = 127/364 (34%), Gaps = 70/364 (19%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKGST----YWTGGNVNVP 57 L TK L+ GL K + A V I+P YW + +P Sbjct: 509 LFTVKTKCLIWGLQVKAVQSMLDFDYASGRDSPSVAALIYPFSDDHQLTFYWGAKELFLP 568 Query: 58 VFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE------------------------ 92 V+ + A + A V + A D +E++E Sbjct: 569 VYKYMLNAMHKHPDARILVNFASLRVAYDICMEAMEVDCILSSNYKENGILNEHSDTSIN 628 Query: 93 ---------AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG-- 141 A+I I I EGIP R+ R + + LIGP G L KIG Sbjct: 629 HNDGLRVNEAQIKCIAIIAEGIPENMTRRLIQRSRERNILLIGPATVGGLKSGCFKIGNT 688 Query: 142 ------IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 I+ ++R GSV +SRSG ++ E S G V IGGD G+ FID Sbjct: 689 GGMTDNILASKLYRPGSVAYVSRSGGMSNELNNIISMNSDGVYEGVAIGGDRFPGSTFID 748 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP------ 249 + + + IV++GE+GG E ++ KKPIV + G Sbjct: 749 HILRYENNPEIGMIVVLGEVGGVEEY---AIIEAVKSGKIKKPIVAWCIGSCGELLSSAA 805 Query: 250 -------------PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GHAGA + + A K +A+ GI + S + + + Sbjct: 806 NSNNNTDSNNITGGSIQFGHAGACANSLQETATAKNHALASVGIHVPESFDELDLLIRRV 865 Query: 297 LGSL 300 L Sbjct: 866 FDEL 869 >gi|147906027|ref|NP_001088098.1| succinate-CoA ligase, alpha subunit [Xenopus laevis] gi|52354667|gb|AAH82922.1| LOC494796 protein [Xenopus laevis] Length = 195 Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 108/187 (57%), Positives = 143/187 (76%) Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 L ++++RLIGPNCPG++ P CKIGIMPG I +KG +GI+SRSGTLTYEAV QT+Q Sbjct: 5 KHRLLRQTTTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQ 64 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLGQS VGIGGDP GT FID L++FL+D TE I+++GEIGGS EE AA+FL+ Sbjct: 65 VGLGQSLCVGIGGDPFNGTNFIDCLDVFLSDPKTEGIILIGEIGGSGEENAAEFLRVNNS 124 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KP+V F+AG TAPPGR MGHAGA+I+GGKGGA++KI A+++AG+ ++ SPA++G + Sbjct: 125 GPNAKPVVSFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIAALQKAGVVVSMSPAQLGST 184 Query: 293 LVELLGS 299 + + Sbjct: 185 MHKEFEK 191 >gi|58697433|ref|ZP_00372733.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Drosophila simulans] gi|58536144|gb|EAL59750.1| succinyl-CoA synthetase, alpha subunit [Wolbachia endosymbiont of Drosophila simulans] Length = 187 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 115/188 (61%), Positives = 143/188 (76%), Gaps = 3/188 (1%) Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 MV+VK L S SRLIGPNCPGI+TP+ CKIGIMPG I ++G +GI+SRSGTLTYEAV Q Sbjct: 1 MVKVKRALIGSKSRLIGPNCPGIITPEECKIGIMPGHIHKRGHIGIMSRSGTLTYEAVAQ 60 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 T+ GLGQST +GIGGDP+ G F+D +ELFL D T IV++GEIGG+ EE+ + F+K Sbjct: 61 TTAVGLGQSTCIGIGGDPIHGMTFVDCMELFLKDNDTHGIVVIGEIGGNEEEDVSHFVKA 120 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 E KKPIVGFVAG+TAPPGR MGHAGA+IS G A K+ M+ AGI IA +PA I Sbjct: 121 EK---TKKPIVGFVAGQTAPPGRRMGHAGAIISSSGGSAGAKLEVMRSAGIAIAETPAVI 177 Query: 290 GRSLVELL 297 G+ ++E++ Sbjct: 178 GKKVLEVM 185 >gi|218437306|ref|YP_002375635.1| CoA-binding protein [Cyanothece sp. PCC 7424] gi|218170034|gb|ACK68767.1| CoA-binding domain protein [Cyanothece sp. PCC 7424] Length = 295 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 89/300 (29%), Positives = 155/300 (51%), Gaps = 18/300 (6%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 N+ VL+QG+T + + + T +V GI+ ++P+F V EA Sbjct: 6 NSTVLIQGMTTPLAYAYVPR-LKNAGTNIVAGINVGGAGEKI----ADIPMFDLVEEAMT 60 Query: 68 RTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + S+I+V P DA +E++ ++I I+ IT G+P LDMV++ + + +++ ++G Sbjct: 61 NVGKIDISLIFVEPYEVLDAALEAMASQIEQIIIITPGVPPLDMVQLLKKAQSTNTFILG 120 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 GI+ PD +GI ++ G VG++SRS LT E ++ LGQS AV +G D Sbjct: 121 SGSQGIIIPDKLWLGICEPQCYKSGKVGLISRSNRLTDEVALTLTEAKLGQSMAVSLGTD 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + G + L++ DE TE+IV++G+ GSAE AA+++ + KP++ ++ G Sbjct: 181 GIIGASYEQWLQILEEDEETEAIVLIGQANGSAELAAAEYIASTIE----KPVIAYMVGN 236 Query: 247 TAPPGRTMGHAGAVISGG-------KGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++ R G A +I+ G + + A KEA I IA S +++ + + L S Sbjct: 237 SSVK-RIFGDAATIIATQLSYSIPTLGTEKQLMTAFKEANITIAKSLSQLPSLVKKALKS 295 >gi|85706367|ref|ZP_01037461.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. 217] gi|85669140|gb|EAQ24007.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. 217] Length = 159 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 97/149 (65%), Positives = 117/149 (78%), Gaps = 5/149 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++LVDK+T+V+ QGLTG GTFH+EQAI Y TQ+VGG+ P KG T +++PVF Sbjct: 1 MAVLVDKHTRVICQGLTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTH----LDLPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EAK T ANASVIYVPP A D+I+E+I+AE+ LIVCITEGIPVLDM+RVK LE S Sbjct: 56 SVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMRVKRALEGS 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 SRLIGPNCPGI+TPD+CKIGIMPG Sbjct: 116 KSRLIGPNCPGIITPDACKIGIMPGPYPP 144 >gi|302829647|ref|XP_002946390.1| hypothetical protein VOLCADRAFT_79099 [Volvox carteri f. nagariensis] gi|300268136|gb|EFJ52317.1| hypothetical protein VOLCADRAFT_79099 [Volvox carteri f. nagariensis] Length = 607 Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 73/316 (23%), Positives = 130/316 (41%), Gaps = 24/316 (7%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKGSTY----WTGGNVNVP 57 L T+ + K + V + P + + + +P Sbjct: 6 LFSPQTQAIFFNWKEKPVQRMLDFDYVCGRETPSVAAIVQPGSSGGFQKLFFGKAEIAIP 65 Query: 58 VF-TTVAEAKERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKA 115 V+ +T ++ A+ + Y A ++ +E++ A I ++ I EG+P D + A Sbjct: 66 VYGSTAEATRKHPKADVFINYASFRSAYESSLEALKAATIRVVAIIAEGVPEKDTKHLIA 125 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP + + KIG I+ + R GSVG +S+SG ++ E Sbjct: 126 YARANNKVIIGPA--TVGGAGAFKIGDTAGTLDNILACKLHRPGSVGFVSKSGGMSNEMY 183 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 ++ G + IGGD G+ D + A + IV++GE+GG E + + Sbjct: 184 NVLARATDGLYEGIAIGGDTFPGSTLSDHCLRYEHVPAIKMIVVLGELGGRDEYGLVEAM 243 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR---TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 K EA KP+V +V+G A + GHAGA G A+ K A+++AG + Sbjct: 244 KAEAI---TKPVVAWVSGTCAKLFKSEVQFGHAGARSGGDLDSAQAKNAALRDAGALVPE 300 Query: 285 SPARIGRSLVELLGSL 300 S + ++ L Sbjct: 301 SFEGLEGAIRSTYQRL 316 >gi|154250058|ref|YP_001410883.1| CoA-binding domain-containing protein [Fervidobacterium nodosum Rt17-B1] gi|154153994|gb|ABS61226.1| CoA-binding domain protein [Fervidobacterium nodosum Rt17-B1] Length = 285 Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 97/294 (32%), Positives = 156/294 (53%), Gaps = 13/294 (4%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 + N KV V G+TG+ G++HT++ I Y T +V G+ NVPV+ T++ Sbjct: 1 MFFSNEKVCVYGITGRYGSYHTKKMIEY-GTDIVCGVSKNNEFKEVH----NVPVYNTLS 55 Query: 64 EAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + R + ++ +VP +A +++ + V ITE +P+ D +R+ ++K++ Sbjct: 56 DYVSRGFNVDTAIFFVPAPYVMEAFLDAFNNGVKKFVVITEHVPIHDALRMVDIVKKNNL 115 Query: 123 RLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 ++GPNCPG++ + K+GIMP F++G V I+SRSGTL YE E G S + Sbjct: 116 TMVGPNCPGVIYSKEKVKLGIMPEKYFKEGEVAIISRSGTLMYEIAKYI-GESYGVSIGI 174 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA-AQFLKDEAKRGRKKPIV 240 G+GGDPV G ++ + E +V++GEIGG E A+ +K K IV Sbjct: 175 GLGGDPVIGLNVLEAFKEVAK-LGFEKVVLIGEIGGEDEITGVAEAIKMGFKPS---NIV 230 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 F AG+ AP G+ MGHAGA++ G G + K M+E G+ + P + + Sbjct: 231 SFFAGRHAPEGKRMGHAGAIVEGEHGKIKYKEEKMREYGVRVVKFPWEVKNAFA 284 >gi|116180274|ref|XP_001219986.1| hypothetical protein CHGG_00765 [Chaetomium globosum CBS 148.51] gi|88185062|gb|EAQ92530.1| hypothetical protein CHGG_00765 [Chaetomium globosum CBS 148.51] Length = 636 Score = 179 bits (453), Expect = 7e-43, Method: Composition-based stats. Identities = 107/270 (39%), Positives = 148/270 (54%), Gaps = 29/270 (10%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 T++VGG+ P + T ++ +PV TV A E+ +A+ IYV A AI E+IE Sbjct: 38 GTRIVGGVTPGR-----TAEHLGLPVLPTVRSAVEQLKPDATAIYVAAHQAAAAIEEAIE 92 Query: 93 AEIPLIVCITEGIPVLDMVRVKARLE---KSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 AE+PLIV + E IP+ DM+R K +S SRL+GPN P G P F Sbjct: 93 AEVPLIVAVAEHIPLHDMLRFKVHSMLKLQSKSRLVGPNSP----------GFQPLPCFT 142 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 G VGI+++SGTL+YEAV T++ GLGQS +G+GGD V GT + L + D T++I Sbjct: 143 PGRVGIVAKSGTLSYEAVASTTRAGLGQSLCIGVGGDIVPGTNLQEALSVLEHDPDTDAI 202 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 ++GEIGG E + A + P+ VAG PGR MGHAGA + G+ A Sbjct: 203 ALIGEIGGRGEFDVADW-----------PVAALVAGIAEEPGRIMGHAGAFTTVGEPNAN 251 Query: 270 DKINAMKEAGICIAPSPARIGRSLVELLGS 299 KI A++ AG + PA G +L L + Sbjct: 252 AKITALESAGATVVGHPAEFGDALKARLEA 281 >gi|224285717|gb|ACN40574.1| unknown [Picea sitchensis] Length = 608 Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats. Identities = 73/315 (23%), Positives = 132/315 (41%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L ++T+ L + V G I+P ++ + +PV Sbjct: 6 LFSRSTQALFYNYKQLPIQRMLDFDFLCGREIPSVAGIINPGSEGFQKLFFGQEEIAIPV 65 Query: 59 FTTV-AEAKERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 + + A K A+ + + A + + ++ + I ++ I EG+P D ++ A Sbjct: 66 HSAIEAACKAHPTADVFINFASYRSAFASSMSALKQPTIRVVAIIAEGVPEGDTKQLIAY 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 ARANNKVIIGPATVGGIQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMSNELYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + +V++GE+GG E + LK Sbjct: 186 TVARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQVKMMVVLGELGGRDEYSLVEALK 245 Query: 229 DEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + +KP+V +V+G A GHAGA G A+ K A++EAG + S Sbjct: 246 ---QGKVQKPVVAWVSGTCARLFKSEVQFGHAGAKSGGELESAQGKNQALREAGAVVPTS 302 Query: 286 PARIGRSLVELLGSL 300 ++ + L Sbjct: 303 YEGFETAIQQTFQKL 317 >gi|323445398|gb|EGB02026.1| hypothetical protein AURANDRAFT_39545 [Aureococcus anophagefferens] Length = 478 Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats. Identities = 80/280 (28%), Positives = 126/280 (45%), Gaps = 21/280 (7%) Query: 39 GIHPKKG----STYWTGGNVNVPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIES--I 91 ++P +G YW VPV+T++AEA + A+ V + D +E+ + Sbjct: 1 MVYPFQGNHYVKFYWGTEETLVPVYTSIAEAASKHGDASCLVNFASYRSVYDTCMETFKL 60 Query: 92 EAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IM 143 A+I + I EG+P + A E++ L+GP G + P +IG I+ Sbjct: 61 SAQIRTVAIIAEGVPEAQTRDIAAAAEEAGVGLVGPATVGGIKPGCFRIGNTGGMLDNIV 120 Query: 144 PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLAD 203 ++R GSV +S+SG ++ E ++ G V IGGD G+ FID L + + Sbjct: 121 MSKLYRPGSVCYVSKSGGMSNELNNIIARSSDGVCEGVAIGGDRYPGSRFIDHLLRYNDN 180 Query: 204 EATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAV 260 + +V++GE+GG E + L+ KP+V + G A GHAGA Sbjct: 181 PDCQILVLLGEVGGVDEYDVCAALESGRI---DKPLVAWCIGTCASAFSFEVQFGHAGAC 237 Query: 261 ISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 G A DK A+ +AG + S A G L E+ L Sbjct: 238 ARGLGEAAVDKNAALAKAGAVVPRSFAEFGARLSEVYALL 277 >gi|115436118|ref|NP_001042817.1| Os01g0300200 [Oryza sativa Japonica Group] gi|14495217|dbj|BAB60936.1| putative ATP citrate lyase a-subunit [Oryza sativa Japonica Group] gi|15623805|dbj|BAB67865.1| putative ATP citrate lyase a-subunit [Oryza sativa Japonica Group] gi|113532348|dbj|BAF04731.1| Os01g0300200 [Oryza sativa Japonica Group] gi|125525538|gb|EAY73652.1| hypothetical protein OsI_01541 [Oryza sativa Indica Group] gi|125570053|gb|EAZ11568.1| hypothetical protein OsJ_01435 [Oryza sativa Japonica Group] Length = 608 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 73/315 (23%), Positives = 131/315 (41%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 + K T+ L + V G I+P ++ + +PV Sbjct: 6 IFSKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGSDGFQKLFFGQEEIAIPV 65 Query: 59 FTTVAEAKERTA-ANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 T+ A A+ + + A + + ++ + I ++ I EG+P D ++ + Sbjct: 66 HPTIEAACNAHPTADVFINFASFRSAAASSMSALKQPTIRVVAIIAEGVPESDTKQLISY 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 ARANNKVIIGPATVGGIQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMSNEMYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + +V++GE+GG E + LK Sbjct: 186 TIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGKDEYSLVEALK 245 Query: 229 DEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + +KP+V +V+G A GHAGA G A+ K A+K+AG + S Sbjct: 246 ---QGKVQKPVVAWVSGTCARLFKSEVQFGHAGAKSGGELESAQAKNQALKDAGAVVPTS 302 Query: 286 PARIGRSLVELLGSL 300 + ++ E L Sbjct: 303 YEALETAIKETFEKL 317 >gi|301093042|ref|XP_002997370.1| ATP-citrate synthase [Phytophthora infestans T30-4] gi|262110768|gb|EEY68820.1| ATP-citrate synthase [Phytophthora infestans T30-4] Length = 1091 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 76/318 (23%), Positives = 133/318 (41%), Gaps = 23/318 (7%) Query: 3 ILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNV 56 + ++ NT+ +V GL + G + V I P YW + Sbjct: 483 VRMNDNTRCIVYGLQQRAVQGMLDFDYLCKRKTPSVAALIFPFSPNHYLKFYWGTSERLI 542 Query: 57 PVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAE--IPLIVCITEGIPVLDMVRV 113 PVF +++A ++ + + + + +E E + I EG+P + Sbjct: 543 PVFQKLSDAVKKFPDVSVLINFSSFRSVYQSTMEGFEHSDSLKTHAIIAEGVPEQQSRLI 602 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 + + + +IGP G + P +IG I+ ++R GSV +S+SG ++ E Sbjct: 603 SKKARELNVGIIGPATVGGIKPGCLRIGNTGGMLDNIVQSKLYRPGSVAYVSKSGGMSNE 662 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 SQ G V IGGD G+ FI L + A+ + +V++GE+GG+ E + Sbjct: 663 LNNIVSQTTDGVYEGVAIGGDKYPGSTFIQHLLRYEANPDVKMMVLLGEVGGTDEFAVCR 722 Query: 226 FLKDEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 ++ KKP+V + G A P GHAGA +G A K A+ AG + Sbjct: 723 AIQ---SGAIKKPVVAWCIGTCAKIFPFEVQFGHAGACATGESETASAKNAALAAAGAIV 779 Query: 283 APSPARIGRSLVELLGSL 300 + + G ++ + S+ Sbjct: 780 PENFDQFGNAIRKQFDSM 797 >gi|326474235|gb|EGD98244.1| succinyl-CoA synthetase subunit alpha [Trichophyton tonsurans CBS 112818] Length = 620 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 83/182 (45%), Positives = 118/182 (64%), Gaps = 2/182 (1%) Query: 119 KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +S SRL+GPNCPGI++ C+IG P F G++GI+++SGTL YE V T++ GLGQ Sbjct: 97 QSKSRLVGPNCPGIISAIGKCRIGFQPLPCFAPGNIGIVAKSGTLGYETVASTTRAGLGQ 156 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRK 236 S +G+ GD + GT+F+D L++F D+ T I+MVGEIGG AE EAA+++K +R Sbjct: 157 SLCIGMSGDVLAGTDFVDALKVFEHDDDTHGIIMVGEIGGEAEMEAAEWIKRYRRRTSEA 216 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KPI+ + G AP GR MGHAGA + G+ A KI A++ AG+ + P + G + L Sbjct: 217 KPIMALIGGIEAPHGRVMGHAGAWTATGEPDARTKIQALQSAGVVMVDHPEKFGEGMKVL 276 Query: 297 LG 298 L Sbjct: 277 LA 278 >gi|164658860|ref|XP_001730555.1| hypothetical protein MGL_2351 [Malassezia globosa CBS 7966] gi|159104451|gb|EDP43341.1| hypothetical protein MGL_2351 [Malassezia globosa CBS 7966] Length = 181 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 98/177 (55%), Positives = 137/177 (77%), Gaps = 1/177 (0%) Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPNCPG++ P+ CKIGIMP I G +GI+SRSGTLTYEAV QT+ GLGQS VGI Sbjct: 1 MVGPNCPGVINPEGCKIGIMPAHIHMPGKIGIVSRSGTLTYEAVNQTTNVGLGQSLCVGI 60 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKPIVGF 242 GGDP G+ +D+++++L D+ +E IV++GEIGGS EE+AA++L+ R KP+V F Sbjct: 61 GGDPYPGSATVDLVKMYLEDDRSEGIVIIGEIGGSMEEDAAEYLEKYNLTRPNPKPVVAF 120 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 +AG+TAPPGR MGHAGA+ISGGKGGA+ K++A+++AG +A SPA+IG +++ + Sbjct: 121 IAGRTAPPGRRMGHAGAIISGGKGGADSKVSALEKAGAIVADSPAKIGELMLKAMKD 177 >gi|15919087|emb|CAC86995.1| ATP citrate lyase a-subunit [Lupinus albus] Length = 608 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 76/315 (24%), Positives = 132/315 (41%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L + T+ L + V G I+P ++ + +PV Sbjct: 6 LFSRTTQALFYNYKQLPVQRMLDFDFLCGRETPSVAGIINPGSEGFQKLFFGQEEIAIPV 65 Query: 59 FTTVAEAKERTA-ANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 T+ A R A+ + + A + + ++ ++ I ++ I EG+P D ++ A Sbjct: 66 HATIEAACARHPTADVFINFASFRSAAASSMAALKQSTIRVVAIIAEGVPESDTKQLIAY 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 ARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMSNELYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + IV++GE+GG E + LK Sbjct: 186 TIARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQVKMIVVLGELGGRDEYSLVEALK 245 Query: 229 DEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + KP+V +V+G A GHAGA G A+ K A++EAG + S Sbjct: 246 ---QGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGELESAQAKNQALQEAGAAVPTS 302 Query: 286 PARIGRSLVELLGSL 300 + ++ E L Sbjct: 303 YEALEAAIKETFDKL 317 >gi|255710353|gb|ACU30996.1| succinyl-CoA synthetase alpha subunit [Ochlerotatus triseriatus] Length = 173 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 99/170 (58%), Positives = 134/170 (78%) Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 GI+ P+ CKIGIMPG I ++GS+G++SRSG LTYEAV QT++ GLGQ+ VGIGGDP G Sbjct: 1 GIIAPEQCKIGIMPGHIHKRGSIGVVSRSGALTYEAVHQTTEVGLGQTLCVGIGGDPFNG 60 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 T+FID LE+FL D T+ I+++GEIGG AEE+AA +L + + KP+V F+AG +APP Sbjct: 61 TDFIDCLEVFLKDPETKGIILIGEIGGVAEEKAADYLMQYNQGIKAKPVVSFIAGLSAPP 120 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GR MGHAGA+ISGGKGGA+DKINA+++AG+ + SPA++G+ L + + L Sbjct: 121 GRRMGHAGAIISGGKGGAQDKINALEKAGVIVTRSPAQMGKELFKEMKRL 170 >gi|297833436|ref|XP_002884600.1| ATP-citrate lyase B-1 [Arabidopsis lyrata subsp. lyrata] gi|297330440|gb|EFH60859.1| ATP-citrate lyase B-1 [Arabidopsis lyrata subsp. lyrata] Length = 608 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 73/315 (23%), Positives = 130/315 (41%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L +NT+ L + V G I+P ++ + +PV Sbjct: 6 LFSRNTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGSEGFQKLFFGQEEIAIPV 65 Query: 59 FTTVAEAKE-RTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 + A A+ + + A + + ++ + I ++ I EG+P D ++ A Sbjct: 66 HAAIEAACAAHPTADVFINFASFRSAAASSMAALKQPTIKVVAIIAEGVPESDTKQLIAY 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 ARANNKVIIGPATVGGVQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMSNEMYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + +V++GE+GG E + +K Sbjct: 186 TIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQIKMVVVLGELGGRDEYSLVEAMK 245 Query: 229 DEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + KP+V +V+G A GHAGA G A+ K A+K+AG + S Sbjct: 246 ---QGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALKDAGATVPTS 302 Query: 286 PARIGRSLVELLGSL 300 + ++ E L Sbjct: 303 FEALESAIKETFDKL 317 >gi|225431960|ref|XP_002278181.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296083242|emb|CBI22878.3| unnamed protein product [Vitis vinifera] Length = 608 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 73/315 (23%), Positives = 130/315 (41%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L + T+ L + V G I+P ++ + +PV Sbjct: 6 LFSRTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGSEGFQKLFFGQEEIAIPV 65 Query: 59 FTTV-AEAKERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 +++ A + A+ + + A + + ++ + I ++ I EG+P D ++ A Sbjct: 66 HSSIEAASAAHPTADVFINFASFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAY 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 ARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIQSKLYRPGSVGFVSKSGGMSNELYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + +V++GE+GG E + LK Sbjct: 186 TIARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQVKMVVVLGELGGRDEYSLVEALK 245 Query: 229 DEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + KP+V +V+G A GHAGA G A+ K A+ EAG + S Sbjct: 246 ---QGKINKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALSEAGAVVPTS 302 Query: 286 PARIGRSLVELLGSL 300 ++ E L Sbjct: 303 YEAFETAIKETFEKL 317 >gi|124359946|gb|ABN07962.1| ATP-citrate lyase/succinyl-CoA ligase [Medicago truncatula] Length = 608 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 76/315 (24%), Positives = 129/315 (40%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L + T+ L + V G I+P ++ + +PV Sbjct: 6 LFSRTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGSEGFQKLFFGQEEIAIPV 65 Query: 59 FTTV-AEAKERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 T+ A + A+ + + A + + ++ + I ++ I EG+P D + A Sbjct: 66 HATIEAASAAHPTADVFINFASFRSAAASSMAALKQPTIRVVAIIAEGVPESDTKELIAY 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 ARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMSNELYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + IV++GE+GG E + LK Sbjct: 186 SIARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQVKMIVVLGELGGRDEYSLVEALK 245 Query: 229 DEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + KP+V +V+G A GHAGA G A+ K A++EAG + S Sbjct: 246 ---QGKVTKPVVAWVSGTCATLFKSEVQFGHAGAKSGGDMESAQGKNQALREAGAVVPTS 302 Query: 286 PARIGRSLVELLGSL 300 S+ E L Sbjct: 303 YESFETSIKETFDKL 317 >gi|224101561|ref|XP_002312331.1| predicted protein [Populus trichocarpa] gi|222852151|gb|EEE89698.1| predicted protein [Populus trichocarpa] Length = 608 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 74/315 (23%), Positives = 130/315 (41%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L + T+ L + V G I+P ++ + +PV Sbjct: 6 LFSRTTQALFYNYKQLPIQRMLDFDFLCGRELPSVAGIINPGAEGFQKLFFGQEEIAIPV 65 Query: 59 FTTVAEAKERTA-ANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 +T+ A A+ + + A + + ++ + + ++ I EG+P D ++ A Sbjct: 66 HSTIEAACAAHPTADVFINFASFRSAAASSMSALKQPTVRVVAIIAEGVPEADAKQLIAY 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 ARANNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIACKLYRPGSVGFVSKSGGMSNELYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + IV++GE+GG E + LK Sbjct: 186 SIARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQVKMIVVLGELGGRDEYSLVEALK 245 Query: 229 DEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + KP+V +V+G A GHAGA G A+ K A+K+AG + S Sbjct: 246 ---QGKVSKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALKDAGAVVPTS 302 Query: 286 PARIGRSLVELLGSL 300 ++ E L Sbjct: 303 YEAFETAIKETFEKL 317 >gi|313681795|ref|YP_004059533.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfuricurvum kujiense DSM 16994] gi|313154655|gb|ADR33333.1| ATP-citrate lyase/succinyl-CoA ligase [Sulfuricurvum kujiense DSM 16994] Length = 605 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 79/317 (24%), Positives = 127/317 (40%), Gaps = 17/317 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQT--QVVGGIHPKKG----STYWTGGNV 54 M L K+T+ + A + + +T V + P G ++ + Sbjct: 1 MGALFTKDTQAIFWNNNASAIQRMLDYDYVINRTKPSVAAIVAPTSGNKFEKFFYGPDEI 60 Query: 55 NVPVF-TTVAEAKERTAANASVIYVPPSGAGDAIIESIEA--EIPLIVCITEGIPVLDMV 111 VPVF T A A+ + + A D +E+I + I+ EGIP Sbjct: 61 MVPVFRNTTDAAAAFPNADVLLNFASFRTAYDVTMEAIAIKGQFKTIMVTAEGIPERLAR 120 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLT 163 ++ + + +IGP G + P KI I+ + R GS G+++RSG L Sbjct: 121 KMNQQARDAGVIVIGPATVGGIAPGGFKIANVGGTIENIINSKLHRAGSCGLVTRSGGLF 180 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 E S G + V IGGD G+ FID L ++ + +V++GE+GG+ E + Sbjct: 181 NELSNIISINADGIAEGVAIGGDRFVGSVFIDNLLRMESNPEVKYMVLLGEVGGTEEYKV 240 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 + +K + K G GHAGA + A K AM AGI + Sbjct: 241 IEAVKAGKIKKPIIAWCIGTIAKHFSSGVQFGHAGASANADAETAAAKNEAMAAAGIHVP 300 Query: 284 PSPARIGRSLVELLGSL 300 S + ++ E+ G L Sbjct: 301 ASFNDLPHTIAEVYGKL 317 >gi|255556390|ref|XP_002519229.1| ATP-citrate synthase, putative [Ricinus communis] gi|223541544|gb|EEF43093.1| ATP-citrate synthase, putative [Ricinus communis] Length = 588 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 74/315 (23%), Positives = 129/315 (40%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L + T+ L + V G I+P ++ + +PV Sbjct: 6 LFSRTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGSEGFQKLFFGQEEIAIPV 65 Query: 59 FTTV-AEAKERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 + + A A+ + + A + + ++ + I ++ I EG+P D ++ A Sbjct: 66 HSAIEAACAAHPTADVFINFASFRSAAASSMAALKQPTIRVVAIIAEGVPESDTKQLIAY 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 ARANNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIACKLYRPGSVGFVSKSGGMSNELYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + IV++GE+GG E + LK Sbjct: 186 TIARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQVKMIVVLGELGGRDEYSLVEALK 245 Query: 229 DEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + KP+V +V+G A GHAGA G A+ K A+K+AG + S Sbjct: 246 ---QGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALKDAGAVVPTS 302 Query: 286 PARIGRSLVELLGSL 300 ++ E L Sbjct: 303 YEAFETAIKETFQKL 317 >gi|148872938|gb|ABR15094.1| ATP citrate lyase alpha subunit [Glycyrrhiza uralensis] Length = 608 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 73/315 (23%), Positives = 128/315 (40%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L + T+ L + V G I+P ++ + +PV Sbjct: 6 LFSRTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGSEGFQKLFFGQEEIAIPV 65 Query: 59 FTTVAEAKE-RTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 + + A A+ + + A + + ++ + I ++ I EG+P D ++ A Sbjct: 66 HSAIEAACASHPTADVFINFASFRSAAASSMAALKQPTIRVVAIIAEGVPESDTKQLIAY 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 ARANNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + +V++GE+GG E + LK Sbjct: 186 TIARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQVKMMVVLGELGGRDEYSLVEALK 245 Query: 229 DEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + KP+V +V+G A GHAGA G A+ K A+ EAG + S Sbjct: 246 ---QGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALSEAGAVVPTS 302 Query: 286 PARIGRSLVELLGSL 300 ++ E L Sbjct: 303 YEAFEAAIKETFDKL 317 >gi|15230764|ref|NP_187317.1| ACLB-1; ATP citrate synthase [Arabidopsis thaliana] gi|12321918|gb|AAG50997.1|AC036106_10 ATP citrate lyase, putative; 38389-41775 [Arabidopsis thaliana] gi|12322674|gb|AAG51326.1|AC020580_6 ATP citrate lyase, putative; 3734-7120 [Arabidopsis thaliana] gi|27754223|gb|AAO22565.1| putative ATP citrate lyase [Arabidopsis thaliana] gi|332640905|gb|AEE74426.1| ATP-citrate lyase B-1 [Arabidopsis thaliana] Length = 608 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 72/315 (22%), Positives = 130/315 (41%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L +NT+ L + V G I+P ++ + +PV Sbjct: 6 LFSRNTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGSEGFQKLFFGQEEIAIPV 65 Query: 59 FTTVAEAKE-RTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 + A A+ + + A + + ++ + I ++ I EG+P D ++ A Sbjct: 66 HAAIEAACAAHPTADVFINFASFRSAAASSMAALKQPTIKVVAIIAEGVPESDTKQLIAY 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 ARANNKVIIGPATVGGVQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMSNEMYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + +V++GE+GG E + +K Sbjct: 186 TIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQIKMVVVLGELGGRDEYSLVEAMK 245 Query: 229 DEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + KP+V +V+G A GHAGA G A+ K A+++AG + S Sbjct: 246 ---QGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALQDAGATVPTS 302 Query: 286 PARIGRSLVELLGSL 300 + ++ E L Sbjct: 303 FEALEVAIKETFDKL 317 >gi|159027649|emb|CAO89513.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 295 Score = 172 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 82/301 (27%), Positives = 154/301 (51%), Gaps = 18/301 (5%) Query: 6 DKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEA 65 DK+ ++++QG+ G ++ + + T +V G+ +G +PVF VAEA Sbjct: 5 DKD-QIIMQGIDRPLGKYYAAR-LKTQGTCLVAGVASGQGGEII----AEIPVFDLVAEA 58 Query: 66 KERTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 S+I VPP+ DA +E+I + IP ++ +T G+P LD+V + + + + Sbjct: 59 VAEAGEIKTSLILVPPNQVLDAALEAIASAIPQLIIVTPGVPPLDLVELLKIASTTGTLI 118 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GP G++ P+ +GI S ++ G++G+++R + E + G G+S AV +G Sbjct: 119 LGPGSQGVIIPNYLWLGICEPSFYQLGTIGLITRGDRIGDEVAKTLTAAGYGESMAVNLG 178 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 D + G+ L++F D+ TE+I++V ++GG AE EAA+++ + KP++ ++ Sbjct: 179 TDGIIGSNLSQWLQVFEEDDNTEAILLVSQVGGKAEIEAAKYIASAIE----KPVIAYLV 234 Query: 245 GKTAPPGRTMGHAGAVISG-------GKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G A G +IS K +D ++ +EAG+ + A + SL ++L Sbjct: 235 GLNAAIETNFGDTETIISNQLSYSVAAKNTRKDSLHHFQEAGVTVVEKLADLPASLAKVL 294 Query: 298 G 298 Sbjct: 295 S 295 >gi|38048587|gb|AAR10196.1| similar to Drosophila melanogaster Scsalpha [Drosophila yakuba] Length = 180 Score = 172 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 92/160 (57%), Positives = 124/160 (77%), Gaps = 6/160 (3%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 26 NLKLNGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 80 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-EKS 120 VAEAK+ T +A+VIYVPP GA AIIE+++AEIPLIVCITEG+P DMV+VK L +S Sbjct: 81 VAEAKKATDPHATVIYVPPPGAAAAIIEALDAEIPLIVCITEGVPQHDMVKVKHALISQS 140 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSG 160 SRL+GPNCPGI+ P+ CKIGIMPG I ++G +G++SRSG Sbjct: 141 KSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVVSRSG 180 >gi|297792199|ref|XP_002863984.1| ATP-citrate lyase B-2 [Arabidopsis lyrata subsp. lyrata] gi|297309819|gb|EFH40243.1| ATP-citrate lyase B-2 [Arabidopsis lyrata subsp. lyrata] Length = 608 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 72/315 (22%), Positives = 127/315 (40%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L + T+ L + V G I+P ++ + +PV Sbjct: 6 LFSRTTQALFYNYKQLPVQRMLDFDFLCGRETPSVAGIINPGSEGFQKLFFGQEEIAIPV 65 Query: 59 FTTVAEAKE-RTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 + A A+ + + A + + ++ + I ++ I EG+P D + A Sbjct: 66 HAAIEAACAAHPTADVFINFASFRSAAASSMAALKQPTIKVVAIIAEGVPESDTKHLIAY 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 ARANNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMSNEMYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + +V++GE+GG E + LK Sbjct: 186 TVARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQIKMMVVLGELGGRDEYSLVEALK 245 Query: 229 DEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + KP+V +V+G A GHAGA G A+ K A+ +AG + S Sbjct: 246 E---GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALMDAGAIVPTS 302 Query: 286 PARIGRSLVELLGSL 300 + ++ E L Sbjct: 303 FEALEAAIKETFEKL 317 >gi|224108730|ref|XP_002314948.1| predicted protein [Populus trichocarpa] gi|222863988|gb|EEF01119.1| predicted protein [Populus trichocarpa] Length = 616 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 74/315 (23%), Positives = 130/315 (41%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L + T+ L + V G I+P ++ + +PV Sbjct: 6 LFSRTTQALFYNYKQLPIQRMLDFDFLCGRELPSVAGIINPGAEGFQKLFFGQEEIAIPV 65 Query: 59 FTTV-AEAKERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 +TV A A+ + + A + + ++ + + ++ I EG+P D ++ A Sbjct: 66 HSTVEAACTAHPTADVFINFASFRSAAASSMAALKQPTVRVVAIIAEGVPEADTKQLIAY 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 ARANNKVVIGPATVGGIQAGAFKIGETAGTIDNIIACKLYRSGSVGFVSKSGGMSNELYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + +V++GE+GG E + LK Sbjct: 186 AIARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQVKIMVVLGELGGRDEYSLVEALK 245 Query: 229 DEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + KP+V +V+G A GHAGA G A+ K A+K+AG + S Sbjct: 246 ---QGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQAIKDAGAVVPTS 302 Query: 286 PARIGRSLVELLGSL 300 ++ E L Sbjct: 303 YEAFETAIKETFEKL 317 >gi|15239897|ref|NP_199757.1| ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2); ATP citrate synthase [Arabidopsis thaliana] gi|9759429|dbj|BAB09916.1| ATP citrate lyase [Arabidopsis thaliana] gi|14334788|gb|AAK59572.1| putative ATP citrate lyase [Arabidopsis thaliana] gi|16648644|gb|AAL25638.1| ATP-citrate lyase subunit B [Arabidopsis thaliana] gi|17065616|gb|AAL33788.1| putative ATP citrate lyase [Arabidopsis thaliana] gi|332008431|gb|AED95814.1| ATP citrate lyase subunit B 2 [Arabidopsis thaliana] Length = 608 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 72/315 (22%), Positives = 128/315 (40%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L + T+ L + V G I+P ++ + +PV Sbjct: 6 LFSRTTQALFYNYKQLPVQRMLDFDFLCGRETPSVAGIINPGSEGFQKLFFGQEEIAIPV 65 Query: 59 FTTVAEAKE-RTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 + A A+ + + A + + ++ + I ++ I EG+P D ++ A Sbjct: 66 HAAIEAACAAHPTADVFINFASFRSAAASSMAALKQPTIKVVAIIAEGVPESDTKQLIAY 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ +IGP G + + KIG I+ ++R GSVG +S+SG ++ E Sbjct: 126 ARANNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMSNEMYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + +V++GE+GG E + LK Sbjct: 186 TVARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQIKMMVVLGELGGRDEYSLVEALK 245 Query: 229 DEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + KP+V +V+G A GHAGA G A+ K A+ +AG + S Sbjct: 246 E---GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALIDAGAIVPTS 302 Query: 286 PARIGRSLVELLGSL 300 + ++ E L Sbjct: 303 FEALESAIKETFEKL 317 >gi|218441180|ref|YP_002379509.1| CoA-binding protein [Cyanothece sp. PCC 7424] gi|218173908|gb|ACK72641.1| CoA-binding domain protein [Cyanothece sp. PCC 7424] Length = 921 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 70/304 (23%), Positives = 121/304 (39%), Gaps = 21/304 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 +S + + NT V V G T K G+ G I+P + +P + Sbjct: 23 LSFIFNPNT-VAVIGATDKEGSVGRTLLWNLISNPFGGTIYPINPKR---HNVLGIPAYP 78 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-----PVLDMVRVKA 115 ++ E + +VI P I E I+A++ + I+ G P ++ R Sbjct: 79 HISTVPEA--IDLAVIATPAPTIPGIIRECIDAKVKGAIIISAGFREIGEPGRELERQVQ 136 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 + + R+IGPNC G++ P + I R G+VG +S+SG + + + E + Sbjct: 137 EIAQGKIRIIGPNCLGVMNPRTGLNATFASRIARPGNVGFISQSGAICTAVLDWSVPENV 196 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S + IG + + D++ D T IV+ E G +A FL + Sbjct: 197 GFSAFISIGS--MIDVNWGDLIYYLGDDPYTHCIVIYMESIG----DARSFLSAAREVAL 250 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KPI+ +G+T + +SG K + A + G+ + + + E Sbjct: 251 TKPIIIIKSGQTEAAAKAATSHTGALSGSKDVLD---AAFRRCGVLEVNRISEMFD-MAE 306 Query: 296 LLGS 299 LLG Sbjct: 307 LLGK 310 >gi|147677694|ref|YP_001211909.1| succinyl-CoA synthetase, alpha subunit [Pelotomaculum thermopropionicum SI] gi|146273791|dbj|BAF59540.1| succinyl-CoA synthetase, alpha subunit [Pelotomaculum thermopropionicum SI] Length = 162 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 71/162 (43%), Positives = 106/162 (65%), Gaps = 5/162 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I++D+NT+VLVQG+TG G FHT Q + Y T++V G+ P KG G +PV+ Sbjct: 1 MAIIIDENTQVLVQGITGNQGVFHTRQMLAY-GTKIVAGVTPGKGGATVEG----IPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +V EA E +ASV+++P DA ES+EA +P++V +TEG+PV D +++ A ++ Sbjct: 56 SVREACENHRIDASVLFIPAPFTKDAAFESLEAGVPVVVIVTEGVPVHDEIQIVAFAKRK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTL 162 + ++GPN GI + CKIGI P F +G VG++SRSGTL Sbjct: 116 GAIVLGPNTFGICSSGKCKIGIPPNQYFVEGPVGVVSRSGTL 157 >gi|297701138|ref|XP_002827587.1| PREDICTED: ATP-citrate synthase-like [Pongo abelii] Length = 1058 Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 62/309 (20%), Positives = 111/309 (35%), Gaps = 56/309 (18%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 +PVF +A+A + + + + A D+ +E++ Sbjct: 550 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMN---------------------- 587 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + I P C I I+ ++R GSV +SRSG ++ E S+ Sbjct: 588 -YAQVGG---IKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELNNIISRTT 643 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 G V IGGD G+ F+D + + + IV++GEIGG+ E + + +K+ Sbjct: 644 DGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGIKEGR--- 700 Query: 235 RKKPIVGFVAGKTAPPGRT--------------MGHA------GAVISGGKGGAEDKINA 274 KPIV + G A + H+ A E Sbjct: 701 LTKPIVCWCIGTCATMFSSEDTSKRVSTLHFSIWRHSLPHGWVPATWEEVGESPESVYED 760 Query: 275 MKEAGICIA 283 + +G+ + Sbjct: 761 LVASGVIVP 769 >gi|170077512|ref|YP_001734150.1| succinyl-CoA synthetase, alpha chain [Synechococcus sp. PCC 7002] gi|169885181|gb|ACA98894.1| succinyl-CoA synthetase, alpha chain [Synechococcus sp. PCC 7002] Length = 311 Score = 165 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 73/298 (24%), Positives = 133/298 (44%), Gaps = 17/298 (5%) Query: 8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 N +L+QG+ ++ + + Y + G + +P+F V EAK Sbjct: 6 NHNILIQGIHTPLAQYYLPRMVAYGTEIIGGV-----SAGGGGETLDGIPIFDLVMEAKA 60 Query: 68 RTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + S+I+V P DA E+I A I ++ ++ G+P LDMVR+ + ++ +++G Sbjct: 61 QVGEITTSLIFVEPFEVLDAAFEAIAAGIKQLIIVSAGVPPLDMVRLLCQAQQEEVQILG 120 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P G++ P +G + F+ G V +LSR +L+ E +Q GLGQS V +G Sbjct: 121 PGSSGLVIPGQLWLGTSFVNHFQPGEVALLSRFSSLSQEVAILLNQAGLGQSYVVDVGNA 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + G+ F L D T++I ++G G E + ++D+ + P+V ++ G Sbjct: 181 DLPGSHFAQWLHYLDQDPQTQAIALLGRYGSQEEIDLIPLIRDQIQT----PVVTYLCGS 236 Query: 247 TAPPGRTMGHAGAVISGGKG-------GAEDKINAMKEAGICIAPSPARIGRSLVELL 297 AP R+ AG +I+ + +A K + + I + + L Sbjct: 237 HAPIQRSCYDAGTIIANQLSYCISDTYTPAEMHSAFKREKLAFGRNLKEIPTLIKKAL 294 >gi|302497886|ref|XP_003010942.1| succinyl-CoA synthetase beta subunit, putative [Arthroderma benhamiae CBS 112371] gi|291174488|gb|EFE30302.1| succinyl-CoA synthetase beta subunit, putative [Arthroderma benhamiae CBS 112371] Length = 510 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 85/182 (46%), Positives = 120/182 (65%), Gaps = 2/182 (1%) Query: 119 KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +S SRL+GPNCPGI++ C+IG P F G+VGI+++SGTL YE V T++ GLGQ Sbjct: 5 QSKSRLVGPNCPGIISAIGKCRIGFQPLPCFAPGNVGIVAKSGTLGYETVASTTRAGLGQ 64 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRK 236 S +G+GGD + GT+F+D L++F D+ T I++VGEIGG AE EAA+++K +R Sbjct: 65 SLCIGMGGDVLAGTDFVDALKVFEHDDDTHGIIIVGEIGGEAEMEAAEWIKGYRRRTSEA 124 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KPI+ + G APPGR MGHAGA + G+ A KI A++ AG+ + P + G + L Sbjct: 125 KPIMALIGGIEAPPGRVMGHAGAWTAEGEPDARTKIQALQSAGVIMVDHPEKFGEGMKAL 184 Query: 297 LG 298 L Sbjct: 185 LA 186 >gi|307107150|gb|EFN55394.1| hypothetical protein CHLNCDRAFT_31334 [Chlorella variabilis] Length = 590 Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats. Identities = 72/302 (23%), Positives = 125/302 (41%), Gaps = 26/302 (8%) Query: 22 TFHTEQAILYCQTQVVGGIHPKKGSTY----WTGGNVNVPVFTTVAEAKER-TAANASVI 76 + V + P + + + +P+ ++AEA E A+ V Sbjct: 1 MLDFDFLCGRKTPSVAVIVQPGAAGGFQKLFFGQEEIAIPMVGSIAEAAEAFPKADVLVN 60 Query: 77 YVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + A ++ +E++ +A I ++ I EG+P D + A ++ +IGP G + Sbjct: 61 FSSYRSAFESSMEALRQATIRVVAIIAEGVPERDAKAMIAYARDNNKIIIGPATVGGVQA 120 Query: 136 DSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + KIG I+ ++R GSVG +S+SG ++ E ++ G + IGGD Sbjct: 121 GAFKIGDAAGTLDNILACKLYRPGSVGFVSKSGGMSNEMYNVIARAADGVYEGIAIGGDA 180 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF----- 242 G+ D + + IV++GEIGG E + LK KP+V + Sbjct: 181 FPGSTLSDHCLRYQNIPQIKMIVVLGEIGGQDEYSLVEALKAGRI---TKPVVAWARQAA 237 Query: 243 VAGKTAPPGR---TMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVELLG 298 V G A + GHAGA G + A K A+ AG + S + ++ ++ Sbjct: 238 VVGTCAKLFKSEVQFGHAGAKSGGDEERASPAKNAALSAAGAIVPGSFEELEGTIRKVYL 297 Query: 299 SL 300 L Sbjct: 298 EL 299 >gi|13160653|gb|AAK13318.1|AF290958_1 ATP:citrate lyase [Capsicum annuum] Length = 608 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 70/315 (22%), Positives = 125/315 (39%), Gaps = 21/315 (6%) Query: 4 LVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKGST---YWTGGNVNVPV 58 L K T+ L + V G I+P ++ + +PV Sbjct: 6 LFSKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGSEGFQKLFFGQEEIAIPV 65 Query: 59 FTTV-AEAKERTAANASVIYVPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKAR 116 +TV A A+ + + A + + ++ + I ++ I EG+P D ++ Sbjct: 66 HSTVEAACAAHPTADVFINFASFRSAAASSMSALKQPTIRVVAIIAEGVPESDTKQLIGF 125 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVF 168 + ++ +IGP G + + KIG I+ + + GI +SG ++ E Sbjct: 126 AKANNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIQCKLLQAWICGIRLKSGGMSNELYN 185 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G + IGGD G+ D + F + IV++GE+GG E + LK Sbjct: 186 TIARVTDGVYEGIAIGGDVFPGSTLSDHVLRFNNIPQVKMIVVLGELGGRDEYSLVEALK 245 Query: 229 DEAKRGRKKPIVGFVAGKTA---PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + KP+V +V+G A GHAGA G A+ K A+++AG + S Sbjct: 246 ---QGKINKPVVAWVSGTCATLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTS 302 Query: 286 PARIGRSLVELLGSL 300 ++ +L Sbjct: 303 YEAFEGAIKAAFENL 317 >gi|149370452|ref|ZP_01890141.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [unidentified eubacterium SCB49] gi|149356003|gb|EDM44560.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [unidentified eubacterium SCB49] Length = 147 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 76/150 (50%), Positives = 102/150 (68%), Gaps = 5/150 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+K++K++VQG TG GTFH Q I Y T VVGG+ P KG PVF Sbjct: 1 MSVLVNKDSKIIVQGFTGSEGTFHAGQMIEY-GTNVVGGVTPGKGGQTHLDK----PVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEA + A+ ++I+VPP+ A DAI+E+ +A I +I+ ITEGIPV DM++ +E Sbjct: 56 TVAEAVKEVGADTTIIFVPPAFAADAIMEAADAGIKVIITITEGIPVADMIKAANYIENK 115 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 RLIGPNCPG++TP K+GIMPG +F+K Sbjct: 116 ECRLIGPNCPGVITPGEAKVGIMPGFVFKK 145 >gi|289608639|emb|CBI60557.1| unnamed protein product [Sordaria macrospora] Length = 252 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 85/131 (64%), Positives = 103/131 (78%), Gaps = 5/131 (3%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV+KNTKV+ QG+TG+ G+FHT+ A+ Y TQ+VGG+ P KG T G +PV+ Sbjct: 127 MSILVNKNTKVITQGMTGETGSFHTKAALEY-GTQMVGGVTPGKGGTEHLG----LPVYN 181 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TVAEAK +T A+ASVIYVPP A D+I+E+I+AEIPLIV ITEGIPVLDMV+VK L S Sbjct: 182 TVAEAKSKTGADASVIYVPPPFAADSILEAIDAEIPLIVAITEGIPVLDMVKVKRALSGS 241 Query: 121 SSRLIGPNCPG 131 SRLIGPNCPG Sbjct: 242 KSRLIGPNCPG 252 >gi|325118886|emb|CBZ54438.1| cDNA FLJ55447, highly similar to ATP-citrate synthase, related [Neospora caninum Liverpool] Length = 1295 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 82/319 (25%), Positives = 136/319 (42%), Gaps = 23/319 (7%) Query: 2 SILVDKNTKVLVQGLTGKAG--TFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 S L + T V GL +A + A + V ++ + S Y+ V Sbjct: 678 SQLFTQTTNCFVWGLQTRAVQEMLDFDHACGRKKPSVAAILYEFSVSHQRSFYFGTEEVL 737 Query: 56 VPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIE--AEIPLIVCITEGIPVLDMVR 112 +PV+ T+ EA + + + A ++E ++ IV I EG+P + + Sbjct: 738 LPVYQTLQEAVHHFPEVSVLINFASMRSAASVTRLALETAPQLRTIVVIAEGVPEREARQ 797 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTY 164 + A LIGP G +T + +IG +M ++R GSVG +++SG + Sbjct: 798 LAAETRARGVCLIGPATVGGITSGAFRIGNTGGTLENVMNARLYRPGSVGCVTKSGGMLN 857 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAA 224 E S G A+ IGGD GT +D L F + + +V++GE+GG E E Sbjct: 858 EMNNILSIVSDGTYEAIAIGGDRFPGTSMLDHLLRFERNPDIKFLVLLGEVGGGMEYEVV 917 Query: 225 QFLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 + +KD KP++ + G A + GHAGA + A K A+K AG Sbjct: 918 EAIKDGR---LTKPLIAWCVGTCASLFSTEVSFGHAGAWAGSHREHAAAKNAALKAAGAF 974 Query: 282 IAPSPARIGRSLVELLGSL 300 + S +G+++ + L Sbjct: 975 VPSSFDELGKAIRHVYVQL 993 >gi|270667856|ref|ZP_06222459.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae HK1212] gi|270316804|gb|EFA28545.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae HK1212] Length = 152 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 99/156 (63%), Positives = 119/156 (76%), Gaps = 4/156 (2%) Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + + PNCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG G Sbjct: 1 MNINRRKFTRPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFG 60 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 QST VGIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD Sbjct: 61 QSTCVGIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDHV----T 116 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 KP+V ++AG TAP G+ MGHAGA+ISGGKG A +KI Sbjct: 117 KPVVAYIAGITAPKGKRMGHAGAIISGGKGTAVEKI 152 >gi|313227556|emb|CBY22703.1| unnamed protein product [Oikopleura dioica] Length = 899 Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 15/244 (6%) Query: 69 TAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGP 127 A+ + + A +A + ++ ++I I I EGIP + + +IGP Sbjct: 530 PKADVVINFASLRSAEEATKDILKYSQIRTIATIAEGIPENKTKLLNKMAHERGVTIIGP 589 Query: 128 NCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 G + P KIG I+ ++R GSV +SRSG ++ E S+ G Sbjct: 590 ATVGGIKPGCFKIGNTGGMLDNILDSKLYRPGSVAYVSRSGGMSNELNNIISRNTNGVFE 649 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 IGGD G+ F D L + + E +V++GEIGG E + +K + KP+ Sbjct: 650 GCAIGGDRYPGSNFYDHLIRYHNNPKVELLVLLGEIGGLEEY---EIIKAKENGLITKPV 706 Query: 240 VGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 V + G A GHAGA + A K A++EAG + S +G ++ Sbjct: 707 VAWCIGTCAKLFGSDVQFGHAGASANANAETAVAKNEALREAGFVVPTSFDGLGDAIKTA 766 Query: 297 LGSL 300 L Sbjct: 767 YQQL 770 >gi|213029163|ref|ZP_03343610.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 151 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 91/155 (58%), Positives = 116/155 (74%), Gaps = 4/155 (2%) Query: 143 MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA 202 MPG I + G VGI+SRSGTLTYEAV QT+ G GQST VGIGGDP+ G+ FID+L+LF Sbjct: 1 MPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILKLFQE 60 Query: 203 DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 D TE+IVM+GEIGGSAEEEAA ++KD KP+VG++AG TAP G+ MGHAGA+I+ Sbjct: 61 DPQTEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVVGYIAGVTAPKGKRMGHAGAIIA 116 Query: 263 GGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 GGKG A++K A++ AG+ S A IG +L ++ Sbjct: 117 GGKGTADEKFAALEAAGVKTVRSLADIGEALKAII 151 >gi|307151127|ref|YP_003886511.1| CoA-binding domain-containing protein [Cyanothece sp. PCC 7822] gi|306981355|gb|ADN13236.1| CoA-binding domain protein [Cyanothece sp. PCC 7822] Length = 912 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 73/304 (24%), Positives = 117/304 (38%), Gaps = 21/304 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 +S + +T V V G T K G+ G I+P + G P Sbjct: 23 LSFIFKPDT-VAVIGATDKEGSVGRTLLWNLISNPFGGTIYPINPKRHNVLGIQAYPNIK 81 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV-----LDMVRVKA 115 V E + +VI P I E +EA + + I+ G L++ R Sbjct: 82 AVPE-----PVDLAVIATPAPTIPGIIAECVEAGVQGAIIISAGFREIGAAGLELERQIQ 136 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 + + R+IGPNC G++ P + I R G+VG +S+SG + + + E + Sbjct: 137 EIARGKIRIIGPNCLGVMNPRNGLNATFASGIARPGNVGFISQSGAICTAVLDWSISENV 196 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S V IG + + D++ D T IV+ E G +A FL + Sbjct: 197 GFSAFVSIGS--MLDVNWGDLIYYLGDDPHTHCIVIYMESIG----DARSFLSAAREVAL 250 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KPI+ AG+T + +SG K + A + G+ + + + E Sbjct: 251 TKPIIIIKAGQTEAAAKAATSHTGALSGSKDVLD---AAFRRCGVLEVNRISEMFD-MAE 306 Query: 296 LLGS 299 LLG Sbjct: 307 LLGK 310 >gi|156053373|ref|XP_001592613.1| hypothetical protein SS1G_06854 [Sclerotinia sclerotiorum 1980] gi|154704632|gb|EDO04371.1| hypothetical protein SS1G_06854 [Sclerotinia sclerotiorum 1980 UF-70] Length = 580 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 93/225 (41%), Positives = 132/225 (58%), Gaps = 11/225 (4%) Query: 84 GDAIIESIEAEIPLIVCITEG-------IPVLDMVRVKARLEKSSSRLIGPNCPGILTP- 135 ESIE ++ +T G +PVL V K +S SRL+G N PGI++ Sbjct: 2 ASNAKESIEWGTNIVGGVTPGKNGEHLGLPVLPTV--KEENSQSKSRLVGANTPGIISAI 59 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 C+IG P S F G +GI+++SGTL+YEAV T++ GLGQS +G+GGD + GT F+D Sbjct: 60 GKCRIGFQPLSCFTPGRIGIVAKSGTLSYEAVASTTRAGLGQSLCIGMGGDILAGTNFVD 119 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG-RKKPIVGFVAGKTAPPGRTM 254 L++F D+ TE I+++GE+GG AE EAA ++++ KR KP V G A PG+ M Sbjct: 120 ALKIFEHDDDTEGIIIIGELGGEAELEAAAWIEEYKKRSLNPKPTAALVVGNHAVPGKVM 179 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GHAGA G+ KI A + AG+ + PA+ G ++ LLG Sbjct: 180 GHAGAFTLPGEPDVLTKIKAFENAGVTMVNHPAKFGNAMKTLLGD 224 >gi|332266595|ref|XP_003282290.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial-like, partial [Nomascus leucogenys] Length = 199 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 93/153 (60%), Positives = 112/153 (73%), Gaps = 6/153 (3%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 50 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 104 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR-LEKSS 121 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITEGIP DMVRVK + L + Sbjct: 105 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQGK 164 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 +RLIGPNCPG++ P CKIGIMPG I +KG +G Sbjct: 165 TRLIGPNCPGVINPGECKIGIMPGHIHKKGRIG 197 >gi|238578335|ref|XP_002388685.1| hypothetical protein MPER_12266 [Moniliophthora perniciosa FA553] gi|215450185|gb|EEB89615.1| hypothetical protein MPER_12266 [Moniliophthora perniciosa FA553] Length = 169 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 97/169 (57%), Positives = 127/169 (75%), Gaps = 1/169 (0%) Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KSSSR 123 A T +A+++YVPP A DAIIE+IE EI LIVC+TEGIP D +RV L+ +S SR Sbjct: 1 AVRETQPDATILYVPPPTAADAIIEAIENEIGLIVCVTEGIPQADEIRVMHALKSQSKSR 60 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPNCPG++ P+ CK+GI PG I + G +GI+SRSGTLTYEAV QT+ GLGQS +GI Sbjct: 61 LVGPNCPGVINPEGCKMGIQPGHIHKPGKIGIVSRSGTLTYEAVAQTTGVGLGQSLCLGI 120 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GGDP GT+ +D +++FL D TE IV++GEIGG+ EEEAA++L+ K Sbjct: 121 GGDPFPGTQHVDGIKVFLEDPKTEGIVIIGEIGGTMEEEAAEYLEKYNK 169 >gi|315426510|dbj|BAJ48142.1| succinyl-CoA synthetase alpha subunit [Candidatus Caldiarchaeum subterraneum] Length = 162 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 89/165 (53%), Positives = 117/165 (70%), Gaps = 3/165 (1%) Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 TP + K+GIMPG IF+KG VGI+SRSGTLTYE + +GLGQST +GIGGDPV G F Sbjct: 1 TPGAAKVGIMPGHIFKKGVVGIVSRSGTLTYEIAHAITVKGLGQSTCIGIGGDPVVGLNF 60 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 IDVLE+F DE TE++V++GEIGG EE AA ++ K KP+V ++AG+TAPP + Sbjct: 61 IDVLEMFRRDEETEAVVLIGEIGGDLEERAADYI---VKTRYPKPVVAYIAGRTAPPEKR 117 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 MGHAGA+IS G G K+ A+ +AG+ +A +P + LV+LL Sbjct: 118 MGHAGAIISLGAGDPASKVKALTQAGVHVASTPGEVADKLVQLLK 162 >gi|270700774|ref|ZP_06223031.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae HK1212] gi|270315892|gb|EFA27976.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae HK1212] Length = 155 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 97/149 (65%), Positives = 115/149 (77%), Gaps = 4/149 (2%) Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 + I NCPG++TPD CKIGIMP I +KG VGI+SRSGTLTYEAV QT+ EG GQST V Sbjct: 11 DQRIKNNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTCV 70 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIGGDP+ G+ FID+LE F D TE+IVM+GEIGGSAEEEAA F+KD KP+V Sbjct: 71 GIGGDPILGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDHV----TKPVVA 126 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAED 270 ++AG TAP G+ MGHAGA+ISGGKG A + Sbjct: 127 YIAGITAPKGKRMGHAGAIISGGKGTAVE 155 >gi|254417269|ref|ZP_05031013.1| acetyltransferase, GNAT family [Microcoleus chthonoplastes PCC 7420] gi|196175922|gb|EDX70942.1| acetyltransferase, GNAT family [Microcoleus chthonoplastes PCC 7420] Length = 913 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 61/302 (20%), Positives = 120/302 (39%), Gaps = 23/302 (7%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 +T V V G T K G+ G I P + +P ++++ Sbjct: 26 FFAPDT-VAVIGATDKEGSVGRTLLWNLMSNPFGGTIFPVNPKR---HSVLGIPAYSSIK 81 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV-----LDMVRVKARLE 118 + + + ++I +P + E +E + + I+ G +++ + Sbjct: 82 DIPD--PVDLAIIAIPAPFVPGVVQECVEVGVKSAIIISAGFKEIGPKGVELEQQILETA 139 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + R+IGPNC G+++P S ++ R G++ +S+SG L + + E +G S Sbjct: 140 RGKMRIIGPNCLGLMSPRSGLNATFASTMARPGNLAFISQSGALCTAVLDWSFWENVGFS 199 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + IG + + D++ D T SIV+ E G +A FL + KP Sbjct: 200 AFISIGS--MMDVNWGDLIYYLGDDPHTHSIVIYMESIG----DARSFLSAAREVALTKP 253 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVELL 297 I+ G+T + A A +G G++D + A + G+ + + + + E+ Sbjct: 254 IIVIKTGRTEAAAK----ASASHTGSLAGSDDVLDAAFRRCGVVRVNTISELFD-MAEVW 308 Query: 298 GS 299 Sbjct: 309 AK 310 >gi|115374715|ref|ZP_01461992.1| acetyltransferase, gnat family [Stigmatella aurantiaca DW4/3-1] gi|310822736|ref|YP_003955094.1| acetyl-CoA synthetase [Stigmatella aurantiaca DW4/3-1] gi|115368286|gb|EAU67244.1| acetyltransferase, gnat family [Stigmatella aurantiaca DW4/3-1] gi|309395808|gb|ADO73267.1| Acetyl-CoA synthetase [Stigmatella aurantiaca DW4/3-1] Length = 911 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 118/296 (39%), Gaps = 23/296 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + + G+ G ++P G P +++ E Sbjct: 31 VAVIGASERQGSVGRTLLWNLISNPFGGTVYPVNPKRTNVLGIRTWP---SISAIPE--P 85 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRL 124 + +VI P I E + A + + I+ G + K R+ Sbjct: 86 VDLAVIVTPAPTVPGVIQECVAAGVKGAIIISAGFKETGEEGARLEQEVLREARKGRMRI 145 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPNC G++ P + G++ R G+V +S+SG L + + +E +G S V +G Sbjct: 146 IGPNCLGLMRPTTGLNATFAGAMARPGNVAFISQSGALLTAILDWSQRETVGFSAFVSLG 205 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + + D+++ D T SI++ E G +A FL + +KPI+ A Sbjct: 206 S--MLDVGWGDLIDYLGNDPRTRSILLYMESIG----DARAFLSAAREVALQKPIIVIKA 259 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVELLGS 299 G+T + A A +G G+++ + A + AG+ S A + + E+L Sbjct: 260 GRTEQAAK----AAASHTGTLAGSDEVLTAAFRRAGVLRVDSIADL-FYMAEVLAK 310 >gi|85706366|ref|ZP_01037460.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. 217] gi|85669139|gb|EAQ24006.1| succinyl-CoA synthase, alpha subunit [Roseovarius sp. 217] Length = 145 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 106/144 (73%), Positives = 125/144 (86%) Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++SRSGTLTYEAV QTS GLGQST VGIGGDP+KGTE IDVLE FLAD+ T+SI+M+GE Sbjct: 1 MVSRSGTLTYEAVKQTSDVGLGQSTCVGIGGDPIKGTEHIDVLEWFLADDETQSIIMIGE 60 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 IGGSAEEEAAQFLKDEAKRGRKKP+ GF+AG+TAPPGR MGHAGA+++GGKG AE KI A Sbjct: 61 IGGSAEEEAAQFLKDEAKRGRKKPVAGFIAGRTAPPGRRMGHAGAIVAGGKGDAESKIEA 120 Query: 275 MKEAGICIAPSPARIGRSLVELLG 298 MK AGI +A SPA +G +++ +G Sbjct: 121 MKSAGITVAESPAGLGEAVLTAIG 144 >gi|331220505|ref|XP_003322928.1| ATP-citrate synthase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301918|gb|EFP78509.1| ATP-citrate synthase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1086 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 69/307 (22%), Positives = 113/307 (36%), Gaps = 65/307 (21%) Query: 5 VDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKG----STYWTGGNVNVPV 58 D+ T+ LV GL + G + A + V I+P G YW +PV Sbjct: 529 FDETTRGLVYGLQPRAIQGMLDFDFACGRKKPSVAAMIYPFGGHHVQKFYWGTKETLLPV 588 Query: 59 FTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDMVRVKAR 116 + T+AEA ++ A+ V + + ++++E +I I I EG+P + Sbjct: 589 YATIAEAVKKHPEADTLVNFSSSRSVYQSTLDALEIPQIKSIALIAEGVPERHAREILHL 648 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 E +IGP R G+L Sbjct: 649 AETKKVIIIGPA-------------------------TYRHRWGSL-------------- 669 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 GT FID + + AD + +V++GE+GG E + +K K Sbjct: 670 ------------PGTTFIDHMLRYEADPNCKMLVLLGEVGGVEEYRVIEAVKSGQI---K 714 Query: 237 KPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 KPIV + G A GHAG++ + A+ K AM+ AG + + + +L Sbjct: 715 KPIVAWAIGTCAKMFTTEVQFGHAGSMANSDLETADAKNKAMRAAGFIVPDTFEDLPAAL 774 Query: 294 VELLGSL 300 ++ L Sbjct: 775 KKVYTGL 781 >gi|221117973|ref|XP_002165321.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 201 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 93/151 (61%), Positives = 111/151 (73%), Gaps = 6/151 (3%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 ++KNTKV+ QG TGK GTFH +QAI Y T++VGG+ P KG + G PVF +V E Sbjct: 32 INKNTKVICQGFTGKQGTFHCQQAISY-GTKIVGGVSPNKGGSVHLGR----PVFNSVKE 86 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS-SR 123 AKE T +ASVIYVPP GA AIIE+IEAE+ LIVCITEGIP DMV+VK LE+ S SR Sbjct: 87 AKENTKCDASVIYVPPPGAAAAIIEAIEAEVGLIVCITEGIPQQDMVKVKHVLERQSVSR 146 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 L+GPNCPGI+ P CKIGIMPG I + G +G Sbjct: 147 LLGPNCPGIIKPGECKIGIMPGHIHKPGCIG 177 >gi|170078619|ref|YP_001735257.1| acetyl-CoA synthetase [Synechococcus sp. PCC 7002] gi|169886288|gb|ACB00002.1| acetyl-CoA synthetase [Synechococcus sp. PCC 7002] Length = 915 Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 116/305 (38%), Gaps = 23/305 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 +S + + V V G T K G+ G ++P + + + Sbjct: 24 LSYFFNPKS-VAVIGATDKEGSVGRTLLWNLISHPFGGTVYPVNPKR---NSVLGIKAYD 79 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV-----RVKA 115 ++ E VI +P + E ++ + + I+ G + + Sbjct: 80 NISAVPE--TVELVVIAIPAQFVPQVVRECVDVGVKAAIIISAGFKEIGEEGKALEKEIM 137 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 + R+IGPNC G++ P S ++ + G VG +S+SG + + E + Sbjct: 138 AIAAGKLRIIGPNCLGLMNPHSGLNATFAHAMAQPGHVGFISQSGAFCTAVLDWSFPENV 197 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S + +G + + D++ D T+SIV+ E G +A FL + Sbjct: 198 GFSAFISLGS--MLDVNWGDLITYLGDDPNTKSIVIYMESVG----DARSFLSAAREVAI 251 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLV 294 KPI+ AG+T + A A +G G++ + A + G+ + + +L Sbjct: 252 AKPIIVIKAGRTEAAAK----ASASHTGSLAGSDAVLDAAFRRCGVLRVDRISEL-FNLA 306 Query: 295 ELLGS 299 E+L Sbjct: 307 EILAK 311 >gi|268317337|ref|YP_003291056.1| acetyl coenzyme A synthetase (ADP forming), alpha domain-containing protein [Rhodothermus marinus DSM 4252] gi|262334871|gb|ACY48668.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Rhodothermus marinus DSM 4252] Length = 929 Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 119/296 (40%), Gaps = 23/296 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + + G+ G ++P + + + +V + E Sbjct: 33 VAVIGASERPGSVGRTLLWNLISNPFGGTVYPVNPKRT---NVLGIRAYPSVKDIPE--P 87 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRL 124 + +VI P + E +EA + V I+ G + + + R+ Sbjct: 88 VDLAVIATPAPTVPGVVQECVEAGVKGAVIISAGFKEIGEEGRRLEEQILTIARRGGMRI 147 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPNC G++ P + ++ R G+VG +S+SG L + + +E +G S + IG Sbjct: 148 IGPNCLGVMRPVTGLNATFASTMARPGTVGFISQSGALLTSILDWSLEENVGFSAFISIG 207 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + + D++ +D T+SI++ E G +A FL + +KPI+ A Sbjct: 208 S--MLDVGWGDLIYYLGSDPYTKSIILYMESIG----DARSFLSAAREVALQKPIIVIKA 261 Query: 245 GKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G+T R + H G++ G E A + G+ S A + + E+L Sbjct: 262 GRTEEAARAALSHTGSLA----GSDEVLSAAFRRTGVLRVDSIADL-FYMAEVLAK 312 >gi|108805336|ref|YP_645273.1| CoA-binding protein [Rubrobacter xylanophilus DSM 9941] gi|108766579|gb|ABG05461.1| CoA-binding protein [Rubrobacter xylanophilus DSM 9941] Length = 911 Score = 155 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 71/303 (23%), Positives = 124/303 (40%), Gaps = 24/303 (7%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 + + T V V G T + G+ G + P + + + ++A Sbjct: 24 IFNPET-VAVVGATERPGSVGRTVMWNLISNPFGGTVFPVNPKR---ANVLGIKAYPSIA 79 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI----PVLDMVRVK--ARL 117 E ER + +VI P + E +EA + + I+ G P + + + Sbjct: 80 EVPER--VDLAVIVSPAPTVPGVVRECVEAGVRGAIIISAGFRETGPEGEALERRVLEEA 137 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + R+IGPNC G++ P + + R GSV LS+SG L + + QE +G Sbjct: 138 RRGRMRIIGPNCLGVMNPGTGLNATFAAGMARPGSVAFLSQSGALMTAILDMSFQENVGF 197 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S+ V +G + + D++ D T SIV+ E G +A FL + K Sbjct: 198 SSFVSVGS--MLDVGWGDLIYYLGGDPKTRSIVVYMESVG----DARSFLSAAREVALTK 251 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVEL 296 PI+ AG+T R A A +G G+++ I A + +G+ + + ++ E+ Sbjct: 252 PIIVIKAGRTEQAAR----AAASHTGSLTGSDEVIDAAFRRSGVLRVERISDL-FNMAEV 306 Query: 297 LGS 299 L Sbjct: 307 LSK 309 >gi|148666585|gb|EDK99001.1| succinate-CoA ligase, GDP-forming, alpha subunit, isoform CRA_b [Mus musculus] Length = 149 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 80/133 (60%), Positives = 97/133 (72%), Gaps = 6/133 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I +DKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 21 IYIDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQKHLG----LPVFNTV 75 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS- 121 EAKE+T A ASVIYVPP A AI E+I+AEIPL+VCITEGIP DMVRVK RL + Sbjct: 76 KEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGT 135 Query: 122 SRLIGPNCPGILT 134 +RLIGPNCPG++ Sbjct: 136 TRLIGPNCPGVIN 148 >gi|302536355|ref|ZP_07288697.1| predicted protein [Streptomyces sp. C] gi|302445250|gb|EFL17066.1| predicted protein [Streptomyces sp. C] Length = 241 Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 65/137 (47%), Positives = 93/137 (67%), Gaps = 3/137 (2%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+I ++K++KV+VQG+TG G HT+ +L T +VGG++P+K T VPVF Sbjct: 1 MAIFLNKDSKVIVQGMTGATGMKHTK-LMLADGTNIVGGVNPRKAGTSVDFDGTEVPVFG 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--LE 118 +VAEA E+T AN SV++VPP+ A A++E+I+AEIPL V ITEGI V D A + Sbjct: 60 SVAEAMEKTGANVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAYATAK 119 Query: 119 KSSSRLIGPNCPGILTP 135 + +R+IGPNCPG++ P Sbjct: 120 GNKTRIIGPNCPGLIPP 136 >gi|86605190|ref|YP_473953.1| acetyltransferase [Synechococcus sp. JA-3-3Ab] gi|86553732|gb|ABC98690.1| acetyltransferase, GNAT family [Synechococcus sp. JA-3-3Ab] Length = 931 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 114/294 (38%), Gaps = 20/294 (6%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G T + G+ G ++P + + + ++ E Sbjct: 28 VAVVGATEREGSVGRTVLWNLISHPFGGTVYPVNPKR---HQVLGIRAYERLSALPE--P 82 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV-----LDMVRVKARLEKSSSRLI 125 + ++I +P +G I E +EA + + ++ G L++ + + RLI Sbjct: 83 VDLAIIAIPAAGVPAVIQECVEAGVKGAIVLSAGFKEIGPEGLELEKAIQEAARGKLRLI 142 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 GPNC GI P + + R G+VG +S+SG L + + QE +G S + +G Sbjct: 143 GPNCLGIQNPHTGLNATFAAQMARPGNVGFISQSGALCTSILDWSLQENVGFSAFISLGS 202 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 + + D+++ D T SIV+ E G +A FL + KPI+ AG Sbjct: 203 --MLDVGWGDLIDYLGQDPHTHSIVLYMESVG----DARSFLSAAREVALSKPIIVIKAG 256 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 +T + ++G + A + G+ + + E+L Sbjct: 257 RTQAAAQAAASHTGSLTGSDAVLD---AAFRRCGVLRVDHIEDLFD-MAEVLAK 306 >gi|78221529|ref|YP_383276.1| CoA-binding protein [Geobacter metallireducens GS-15] gi|78192784|gb|ABB30551.1| CoA-binding protein [Geobacter metallireducens GS-15] Length = 909 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 73/297 (24%), Positives = 124/297 (41%), Gaps = 15/297 (5%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 L +K+++V + + G + T + Y VV G+ + + ++PVF +++ Sbjct: 20 LANKHSRVCIMNIRGTESSLVTPVSHAYSGGNVVAGVQYGESGGTFETPVGDIPVFGSIS 79 Query: 64 EAKERT-AANASVIYVPPSGAGDAIIE--SIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 + + V+Y+PPS A+ E + + IV +TE + D ++ + + Sbjct: 80 DVIRAGIHFDTGVVYLPPSAVSHAVSEMCARNVNLKRIVIVTEKVSARDSRLIRYGCQNA 139 Query: 121 SSRLIGPNCPGI------LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 +IG N GI + G +P RKGSV I S SG + G Sbjct: 140 KVDVIGANTLGIANSWDQVRIGGALGGDVPAQSLRKGSVAIYSNSGNFSTTISEYLKTAG 199 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 G ST + G D + L D T++IV+ E GG E++A ++ + Sbjct: 200 FGTSTILSSGKDVYIHFALAEFLYCAENDPRTKAIVVYVEPGGYYEKQALDWISEGR-FK 258 Query: 235 RKKPIVGFVAGKTAPP-GRTMGHAGAVISGGKGGAEDKINAMKE-AGICI--APSPA 287 KPI+ V G+ R+ GHAGA+ +G AE K + G+ + P Sbjct: 259 LTKPIIACVTGRWKKNLTRSCGHAGAM-AGSGDDAEAKEIWFDDFFGVPVFDPERPE 314 >gi|67518053|ref|XP_658797.1| hypothetical protein AN1193.2 [Aspergillus nidulans FGSC A4] gi|40746630|gb|EAA65786.1| hypothetical protein AN1193.2 [Aspergillus nidulans FGSC A4] Length = 581 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 70/162 (43%), Positives = 104/162 (64%), Gaps = 6/162 (3%) Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 +G P S I+++SGTL+YE V T++ GLGQS + +GGDP+ GT F+D L+ Sbjct: 74 FLGSTPYSKP-----SIVAKSGTLSYETVASTTRAGLGQSLCISMGGDPLAGTNFVDALK 128 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRTMGHA 257 +F D TE I++VGEIGG+AE +AA++++D +R KPI+ V G+ APPGR MGHA Sbjct: 129 IFENDPDTEGIILVGEIGGTAEMDAAEWIRDYRRRTTSPKPIMALVGGRQAPPGRIMGHA 188 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GA + G+ G E+K A++ AG + P + G+ + LL + Sbjct: 189 GAWTAPGEPGPEEKYRALERAGAVMVNHPEKFGKGMKALLTN 230 >gi|269837817|ref|YP_003320045.1| CoA-binding domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269787080|gb|ACZ39223.1| CoA-binding domain protein [Sphaerobacter thermophilus DSM 20745] Length = 280 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 88/289 (30%), Positives = 137/289 (47%), Gaps = 36/289 (12%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M++L+D T+VLVQG+T A TEQ + Y T VV G+ P + G VPV+ Sbjct: 1 MTVLIDTTTRVLVQGITEDAAAALTEQMLAY-GTPVVAGVAPGRYGDRVAG----VPVYN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 +VA+A +A++I VPP DA +E++ +I L++ TE +P D+ R+ S Sbjct: 56 SVADAVLFHQPSATLIAVPPDAVLDAALEALSHDIRLLLIATEFVPERDVQRLLGWARDS 115 Query: 121 SSRLIGPNCPGILTPDS-CKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 ++R++GP GI+ P + +IG + P F G VG+++ TL + T + G+ Sbjct: 116 AARVLGPGSAGIIAPAARLRIGTIGGENPDRNFSPGRVGVIAPGATLAADIAALTRRLGI 175 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G STAV G P+ T +L LF D+AT +V+ G AEE A + Sbjct: 176 GISTAVSTGTAPMVVTTPASLLPLFERDDATAGVVLAGN-AAWAEEVADAIM-------- 226 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 + +I GA D +A+ +AG +A Sbjct: 227 -----------------AQRYTKPLIVASTDGAPDGTDALLDAGALVAE 258 >gi|89892992|ref|YP_516479.1| hypothetical protein DSY0246 [Desulfitobacterium hafniense Y51] gi|89332440|dbj|BAE82035.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 188 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 76/191 (39%), Positives = 124/191 (64%), Gaps = 6/191 (3%) Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEA 166 M++++ + + +IG N GI++ +G P +++ G VG+++RSG+LT E Sbjct: 1 MMQLRKIALEKQAMVIGGNTTGIISTGKAMMGFFPYWLDRVYKPGRVGVMTRSGSLTNEV 60 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + G G S+ VG+GGDPV T F ++L LF D T+++VM+GEIGG+ EE+ A+ Sbjct: 61 TAEIVKAGFGPSSIVGVGGDPVPLTRFAEILPLFEKDPDTDAVVMIGEIGGTMEEDVAEA 120 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 ++ +R KP++GF+ G+TAP G+ MGHAGA+I+ GKG EDK+ A+ +AG +A P Sbjct: 121 IE---QRIFTKPLIGFMGGRTAPKGQKMGHAGAIITAGKGTVEDKVEALAKAGALVADRP 177 Query: 287 ARIGRSLVELL 297 + IG+ L ++L Sbjct: 178 SMIGQLLQKVL 188 >gi|75910860|ref|YP_325156.1| GCN5-like N-acetyltransferase [Anabaena variabilis ATCC 29413] gi|75704585|gb|ABA24261.1| GCN5-related N-acetyltransferase [Anabaena variabilis ATCC 29413] Length = 918 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 116/296 (39%), Gaps = 23/296 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V + G + K G+ G + P + G P ++ E Sbjct: 33 VAIIGASEKVGSVGRTILWNLISNPFGGTVFPVNPKRHSVLGIKAYPSIASIPETV---- 88 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRL 124 + ++I P I E ++A + + I+ G ++ A + + R+ Sbjct: 89 -DLAIIATPAPTVPGIISECVDAGVQGAIIISAGFKEAGAEGIALERQILAEARRGNIRI 147 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPNC G+++P + S+ R G+VG LS+SG L + + +E +G S V IG Sbjct: 148 IGPNCLGVMSPRTGLNATFASSMARSGNVGFLSQSGALCTAILDWSVRENVGFSAFVSIG 207 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + + D++ D T+SIV+ E G +A F+ + KPI+ A Sbjct: 208 S--MLDVGWGDLIYYLGDDPQTKSIVIYMESIG----DARSFISAAREVALTKPIIVIKA 261 Query: 245 GKT-APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G+T A H GA+ G A + G+ S + + + E+L Sbjct: 262 GRTEAAAKAAASHTGALA----GSDAVLDAAFRRCGVLRVNSISDLFD-MAEVLAK 312 >gi|213418252|ref|ZP_03351318.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 132 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 81/135 (60%), Positives = 99/135 (73%), Gaps = 4/135 (2%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 TQ+VGG+ P KG T G +PVF TV EA E T A ASVIYVP D+I+E+I+ Sbjct: 2 GTQMVGGVTPGKGGTTHLG----LPVFNTVREAVEATGATASVIYVPAPFCKDSILEAID 57 Query: 93 AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 A I LI+ ITEGIP LDM+ VK +L+++ R+IGPNCPG++TP CKIGIMPG I + G Sbjct: 58 AGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIMPGHIHKPGK 117 Query: 153 VGILSRSGTLTYEAV 167 VGI+SRSGTLTYEAV Sbjct: 118 VGIVSRSGTLTYEAV 132 >gi|158333635|ref|YP_001514807.1| Acetyl-CoA synthetase [Acaryochloris marina MBIC11017] gi|158303876|gb|ABW25493.1| Acetyl-CoA synthetase, putative [Acaryochloris marina MBIC11017] Length = 917 Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 118/297 (39%), Gaps = 23/297 (7%) Query: 10 KVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT 69 +V V G T K + + G + P + + +T + E+ Sbjct: 29 RVAVIGATEKPNSVGRTLLWNLVSSPFGGTVFPVNPKRS---SVLGIKAYTDILSIPEQ- 84 Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV------KARLEKSSSR 123 + +VI +P A+ + I+A + + I+ G + + + R Sbjct: 85 -IDLAVIAIPAPRVLSAVQQCIQAGVRGAIIISAGFKEIGEAGQQLEQEILQTARQGNLR 143 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 +IGPNC G++ P ++ R G+VG LS+SG L + + +E +G S V I Sbjct: 144 IIGPNCLGLMCPPYGLNTTFASTMARPGNVGFLSQSGALCTSILDWSLRENVGFSAFVSI 203 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G + + D++ D T SIV+ E G +A FL + KPI+ Sbjct: 204 GS--MLDISWGDLIYHLGDDPHTHSIVIYMEAIG----DARSFLSAAREVALSKPIIVIK 257 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVELLGS 299 G+T + A A +G G++D + A + G+ + + ++ E+L Sbjct: 258 GGRTQEAAK----AAASHTGSLMGSDDVLDAAFRRCGVLRVNTIDEL-FNMAEVLAK 309 >gi|291570715|dbj|BAI92987.1| acetyl-CoA synthetase [Arthrospira platensis NIES-39] Length = 916 Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 72/305 (23%), Positives = 117/305 (38%), Gaps = 25/305 (8%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I K V V G T K + + G + P G P Sbjct: 25 AIFAPKT--VAVIGATEKPNSVGRTLLWNLIRNPFGGTVFPINPKRSNVLGIKAYPSIGE 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKA 115 V E + ++I P D + + +EA + + ++ G + ++ Sbjct: 83 VPETV-----DLAIIITPAPTVPDIVRQCVEAGVKGAIILSAGFKEIGPKGVELEQQILE 137 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +S R+IGPNC G++ P + ++ GSVG +S+SG L + + QE + Sbjct: 138 YARQSRMRIIGPNCLGLMNPLTGLNATFASAMAIPGSVGFISQSGALCTSILDWSFQENV 197 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S V +G + + D++ D T+SIV+ E G +A FL + Sbjct: 198 GFSAFVSVGS--MLDVGWGDLIYHLGNDPNTKSIVIYMESIG----DARSFLSAAREVAL 251 Query: 236 KKPIVGFVAGKTA-PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KPI+ AG+T H GA+ G + A + G+ A + SL Sbjct: 252 TKPIIVIKAGRTEAAAKAAASHTGALA----GSDDVLDAAFRRCGVLRVYHIAHL-FSLS 306 Query: 295 ELLGS 299 ELLG Sbjct: 307 ELLGK 311 >gi|284051327|ref|ZP_06381537.1| CoA-binding domain protein [Arthrospira platensis str. Paraca] Length = 916 Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats. Identities = 72/305 (23%), Positives = 117/305 (38%), Gaps = 25/305 (8%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I K V V G T K + + G + P G P Sbjct: 25 AIFAPKT--VAVIGATEKPNSVGRTLLWNLIRNPFGGTVFPINPKRSNVLGIKAYPSIGE 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKA 115 V E + ++I P D + + +EA + + ++ G + ++ Sbjct: 83 VPETV-----DLAIIITPAPTVPDIVRQCVEAGVKGAIILSAGFKEIGPKGVELEQQILE 137 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +S R+IGPNC G++ P + ++ GSVG +S+SG L + + QE + Sbjct: 138 YARQSRMRIIGPNCLGLMNPLTGLNATFASAMAIPGSVGFISQSGALCTSILDWSFQENV 197 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S V +G + + D++ D T+SIV+ E G +A FL + Sbjct: 198 GFSAFVSVGS--MLDVGWGDLIYHLGNDPNTKSIVIYMESIG----DARSFLSAAREVAL 251 Query: 236 KKPIVGFVAGKTA-PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KPI+ AG+T H GA+ G + A + G+ A + SL Sbjct: 252 TKPIIVIKAGRTEAAAKAAASHTGALA----GSDDVLDAAFRRCGVLRVYHIAHL-FSLS 306 Query: 295 ELLGS 299 ELLG Sbjct: 307 ELLGK 311 >gi|209527639|ref|ZP_03276138.1| CoA-binding domain protein [Arthrospira maxima CS-328] gi|209491921|gb|EDZ92277.1| CoA-binding domain protein [Arthrospira maxima CS-328] Length = 916 Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats. Identities = 72/296 (24%), Positives = 117/296 (39%), Gaps = 23/296 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G T K + + G + P G P V E Sbjct: 32 VAVIGATEKPNSVGRTLLWNLIRNPFGGTVFPINPKRSNVLGIKAYPSIGEVPETV---- 87 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRL 124 + ++I P D + + +EA + + ++ G + ++ +S+ R+ Sbjct: 88 -DLAIIITPAPTVPDIVRQCVEAGVKGAIILSAGFKEIGPKGVELEQQILEYARQSTMRI 146 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPNC G++ P + ++ +GSVG +S+SG L + + QE +G S V IG Sbjct: 147 IGPNCLGLMNPLTGLNATFASAMAIRGSVGFISQSGALCTSILDWSFQENVGFSAFVSIG 206 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + + D++ D T+SIV+ E G +A FL + KPI+ A Sbjct: 207 S--MLDVGWGDLIYYLGNDPNTKSIVIYMESIG----DARSFLSAAREVALTKPIIVIKA 260 Query: 245 GKT-APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G+T A H GA+ G + A + G+ A + SL ELLG Sbjct: 261 GRTEAAAKAAASHTGALA----GSDDVLDAAFRRCGVLRVYHIAHL-FSLSELLGK 311 >gi|117926912|ref|YP_867529.1| CoA-binding domain-containing protein [Magnetococcus sp. MC-1] gi|117610668|gb|ABK46123.1| CoA-binding domain protein [Magnetococcus sp. MC-1] Length = 916 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 80/320 (25%), Positives = 129/320 (40%), Gaps = 35/320 (10%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 + K +V V + G T + Y +V G P + + ++PV++ V Sbjct: 36 MATKEDRVCVLNILGGESKSVTPISHAYSGGNIVCGTQPGRSGSTLKTPAGDIPVYSNVL 95 Query: 64 EAKERTAA-NASVIYVPPSGAGDAIIESIE--AEIPLIVCITEGIPVLDMVRVKARLEKS 120 EA E NA+V+YVPPSG DA+IE++ + +V +TE + V D ++A + Sbjct: 96 EAVEAGHVFNAAVVYVPPSGVKDAVIEAVRVSPNLKKVVILTEKVAVKDARIIRAYCQMR 155 Query: 121 SSRLIGPNCPGI------LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 ++G NC G+ + G P GSV I S SG T + G Sbjct: 156 GVDVLGANCLGVADAHNKVRIGGALGGANPEESLIPGSVSIFSNSGNFTTTIAVYLATAG 215 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 G +T+V G D + D+ T++ V E GG E + Sbjct: 216 WGTTTSVSSGKDVYIHYAAPEYTYAMHNDDRTKAAVFYVEPGGYYEHDLV---------- 265 Query: 235 RKKPIVGFVAGKT-APPGRTMGHAGAVISGGKGGAEDKINAMKEAGI------------- 280 KKP+V V G+ A R+ GHAGA+ G + M++ G+ Sbjct: 266 FKKPVVACVVGRWKAKLTRSCGHAGAIAGSGDNALAKEEWFMEKFGVDGLFTPENPVCSA 325 Query: 281 --CIAPSPARIGRSLVELLG 298 + + A I +L +++ Sbjct: 326 KGAVVTNIAHIPLALSKVMA 345 >gi|17228264|ref|NP_484812.1| acetyl-CoA synthetase [Nostoc sp. PCC 7120] gi|17130114|dbj|BAB72726.1| acetyl-CoA synthetase [Nostoc sp. PCC 7120] Length = 916 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 118/296 (39%), Gaps = 23/296 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V + G + K G+ G + P + + + ++A E Sbjct: 33 VAIIGASEKVGSVGRTILWNLISNPFGGTVFPVNPKR---HSVLGIKAYPSIAAIPE--T 87 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRL 124 + ++I P S I E ++A + ++ I+ G ++ + + R+ Sbjct: 88 VDLAIIATPASTVPGIISECVDAGVQGVIIISAGFKEAGAEGIALERQILEEARRGNIRI 147 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPNC G+++P + S+ R G+VG LS+SG L + + +E +G S V IG Sbjct: 148 IGPNCLGVMSPRTGLNATFASSMARSGNVGFLSQSGALCTAILDWSVRENVGFSAFVSIG 207 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + + D++ D T+SIV+ E G +A F+ + KPI+ A Sbjct: 208 S--MLDVGWGDLIYYLGDDPQTKSIVIYMESIG----DARSFISAAREVALTKPIIVIKA 261 Query: 245 GKT-APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G+T A H GA+ G A + G+ S + + + E+L Sbjct: 262 GRTEAAAKAAASHTGALA----GSDAVLDAAFRRCGVLRVNSISDLFD-MAEVLAK 312 >gi|226291384|gb|EEH46812.1| succinyl-CoA ligase subunit beta [Paracoccidioides brasiliensis Pb18] Length = 664 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 79/183 (43%), Positives = 114/183 (62%), Gaps = 6/183 (3%) Query: 119 KSSSRLIGPNCPGILTP-DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +S SRL+G NCPGI++ C+IG P F G +GI+++SGTL YE V TS+ GLGQ Sbjct: 141 QSKSRLVGANCPGIISAIGKCRIGFQPLPCFSPGHIGIVAKSGTLGYETVASTSRAGLGQ 200 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S +G+GGD + GT+F+D L +F D+ T I++VGEIGG+AE AA+++ + Sbjct: 201 SLCIGMGGDVLAGTDFVDALSIFEHDDDTHGIIIVGEIGGTAEIAAAEWIAHYRR----- 255 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 PI+ + G AP GR MGHAGA + G+ A+ KI A++ AG + P G + LL Sbjct: 256 PIMAVICGIHAPLGRVMGHAGAWVGPGEPDAQTKIKALQNAGAVMVHHPEDFGEGMKMLL 315 Query: 298 GSL 300 ++ Sbjct: 316 SNM 318 >gi|254432536|ref|ZP_05046239.1| acetyltransferase, gnat family [Cyanobium sp. PCC 7001] gi|197626989|gb|EDY39548.1| acetyltransferase, gnat family [Cyanobium sp. PCC 7001] Length = 938 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 68/296 (22%), Positives = 117/296 (39%), Gaps = 23/296 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + + G+ Q ++ G ++P + V VAE E Sbjct: 32 VAVVGASERPGSVGRTQLWNLIRSPFGGTVYPVNP---HRHSVLGVRCCAGVAEIPE--P 86 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRL 124 + ++I P + E A + + I+ G + R++ L S RL Sbjct: 87 VDLALIATPAPTVPARLEECAAAGVKAAIVISAGFREVGAEGVALESRLRQILRGSGMRL 146 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPNC G++ P + G VG LS+SG + + + ++G+G S V +G Sbjct: 147 LGPNCLGLMNPRLGLNATFASGMAAPGHVGFLSQSGAICTAVLDWSHRQGVGFSAFVSMG 206 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + + D++ D AT SIV+ E G +A FL + KPIV Sbjct: 207 S--MLDVGWGDLITYLGDDPATRSIVVYMEAVG----DARAFLSAAREVALTKPIVLIKG 260 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVELLGS 299 G+T R A A +G G++ + A++ G+ + + L ++L Sbjct: 261 GRTDEAAR----AAASHTGSLAGSDAVLEAALRRCGVLRVDRLSDLFD-LADVLAK 311 >gi|85857866|ref|YP_460068.1| succinyl-CoA synthetase subunit alpha [Syntrophus aciditrophicus SB] gi|85720957|gb|ABC75900.1| succinyl-CoA synthetase, alpha subunit [Syntrophus aciditrophicus SB] Length = 180 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 78/173 (45%), Positives = 109/173 (63%), Gaps = 4/173 (2%) Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 K++S G GIL P K+GIMP S+F G VGI+SRSGTL+YE S+ +GQS Sbjct: 4 KTASLPWGRQHRGILVPGKGKMGIMPASMFAPGRVGIISRSGTLSYEFAGILSENNVGQS 63 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 T VG+G DPV D+LELF DE T+++++VGE+GG EE+AA F+K R KP Sbjct: 64 TVVGMGADPVVLRNLTDILELFEEDEGTDAVIVVGEVGGEQEEKAAGFIK----RRMTKP 119 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 + ++AG+ +P G+ MGHAGA++ G G K A+++AG+ I SP + Sbjct: 120 VAAYIAGRYSPQGKRMGHAGAIVRGASGTVAGKQEALRDAGVTILDSPIHVAD 172 >gi|305682419|dbj|BAJ16297.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi] Length = 144 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 99/145 (68%), Positives = 121/145 (83%), Gaps = 3/145 (2%) Query: 101 ITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSG 160 ITEGIPVLDM+++K L+ S +RLIGPNCPGI+TP+ CKIGIMPG I + GS+GI+SRSG Sbjct: 1 ITEGIPVLDMLKIKQVLKGSKTRLIGPNCPGIITPEQCKIGIMPGHIHKAGSIGIISRSG 60 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 TLTYEAV QT++ GLGQST +GIGGDP+ GT F+D LELFL D+ T++I+++GEIGGSAE Sbjct: 61 TLTYEAVAQTTEVGLGQSTCIGIGGDPINGTSFVDCLELFLEDDDTKAIIIIGEIGGSAE 120 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAG 245 EEAA FLK KKPIVGF+AG Sbjct: 121 EEAADFLKSSKI---KKPIVGFIAG 142 >gi|305682417|dbj|BAJ16296.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi] gi|305682423|dbj|BAJ16299.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi] gi|305682429|dbj|BAJ16302.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi] Length = 144 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 100/145 (68%), Positives = 122/145 (84%), Gaps = 3/145 (2%) Query: 101 ITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSG 160 ITEGIPVLDM+++K L+ S +RLIGPNCPGI+TP+ CKIGIMPG I + GS+GI+SRSG Sbjct: 1 ITEGIPVLDMLKIKQVLKGSKTRLIGPNCPGIITPEQCKIGIMPGHIHKAGSIGIISRSG 60 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 TLTYEAV QT++ GLGQST +GIGGDP+ GT F+D LELFLAD+ T++I+++GEIGGSAE Sbjct: 61 TLTYEAVAQTTEVGLGQSTCIGIGGDPINGTSFVDCLELFLADDDTKAIIIIGEIGGSAE 120 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAG 245 EEAA FLK KKPIVGF+AG Sbjct: 121 EEAADFLKSSRI---KKPIVGFIAG 142 >gi|305682425|dbj|BAJ16300.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi] Length = 144 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 100/145 (68%), Positives = 121/145 (83%), Gaps = 3/145 (2%) Query: 101 ITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSG 160 ITEGIPVLDM+++K L+ S +RLIGPNCPGI+TP+ CKIGIMPG I + GS+GI+SRSG Sbjct: 1 ITEGIPVLDMLKIKQVLKGSKTRLIGPNCPGIITPEQCKIGIMPGHIHKAGSIGIISRSG 60 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 TLTYEAV QT+ GLGQST +GIGGDP+ GT FID LELFLAD+ T++I+++GEIGG+AE Sbjct: 61 TLTYEAVAQTTDAGLGQSTCIGIGGDPINGTSFIDCLELFLADDDTKAIIIIGEIGGTAE 120 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAG 245 EEAA FLK KKPIVGF+AG Sbjct: 121 EEAADFLKSSRI---KKPIVGFIAG 142 >gi|166365653|ref|YP_001657926.1| succinyl-CoA synthetase alpha chain [Microcystis aeruginosa NIES-843] gi|166088026|dbj|BAG02734.1| succinyl-CoA synthetase alpha chain [Microcystis aeruginosa NIES-843] Length = 295 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 81/305 (26%), Positives = 150/305 (49%), Gaps = 28/305 (9%) Query: 6 DKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEA 65 DK+ ++++QG+ G ++ + + T +V G+ G +PVF VAEA Sbjct: 5 DKD-QIIMQGIDRPLGKYYAAR-LKAQGTCLVAGVASGCGGEII----AEIPVFDLVAEA 58 Query: 66 KERTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 S+I VPP+ DA +E+I A IP ++ +T G+P LD+V + + + + Sbjct: 59 VAEAGEIKTSLILVPPNQVLDAALEAIAAAIPQLIIVTPGVPPLDLVELLKIASTTGTLI 118 Query: 125 IGPNCPGILT-----PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +GP G++ +GI + ++ G++G+++R + E + G G+S Sbjct: 119 LGPGSQGVIIPNYLW-----LGICEPNFYQSGTIGLITRGDRIGDEVAKTLTAAGYGESM 173 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 AV +G D + G+ L++F D+ TE+I++V ++GG AE EAA+++ + KP+ Sbjct: 174 AVNLGTDGIIGSNLSQWLQVFEEDDNTEAILLVSQVGGKAEIEAAKYIASAIE----KPV 229 Query: 240 VGFVAGKTAPPGRTMGHAGAVISG-------GKGGAEDKINAMKEAGICIAPSPARIGRS 292 + ++ G A G +IS K +D + +EAG+ + A + S Sbjct: 230 IAYLVGLNAGIETNFGDTETIISNQLSYSVAAKNTRKDSLRHFQEAGVTVVEKLADLPAS 289 Query: 293 LVELL 297 L ++L Sbjct: 290 LAKVL 294 >gi|86607739|ref|YP_476501.1| acetyl coenzyme A synthetase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556281|gb|ABD01238.1| putative acetyl coenzyme A synthetase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 928 Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats. Identities = 64/304 (21%), Positives = 112/304 (36%), Gaps = 32/304 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G T + G+ G ++P + + + ++ E Sbjct: 28 VAVVGATEREGSVGRTVLWNLISHPFGGTVYPVNPKR---HQVLGIRAYERLSALPE--P 82 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS---------- 120 + ++I +P +G + E +EA + + ++ G LEK Sbjct: 83 VDLAIIAIPAAGVPKVVQECVEAGVKGAIVLSAGFKETGPAGW--ELEKQIQQTIQSRQR 140 Query: 121 -----SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 RLIGPNC GI P + + R G+VG +S+SG L + + QE + Sbjct: 141 DGVLRKLRLIGPNCLGIQNPHTGLNATFAAQMARPGNVGFISQSGALCTSILDWSLQENV 200 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S + +G + + D+++ D T SIV+ E G +A FL + Sbjct: 201 GFSAFISLGS--MLDVGWGDLIDYLGEDPHTHSIVLYMESIG----DARSFLSAAREVAL 254 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KPI+ AG+T + ++G + A + G+ + L E Sbjct: 255 SKPIIVIKAGRTQAAAQAAASHTGSLTGSDAVLD---AAFRRCGVLRVDHIEDLFD-LAE 310 Query: 296 LLGS 299 +L Sbjct: 311 VLAK 314 >gi|254423179|ref|ZP_05036897.1| acetyltransferase, GNAT family [Synechococcus sp. PCC 7335] gi|196190668|gb|EDX85632.1| acetyltransferase, GNAT family [Synechococcus sp. PCC 7335] Length = 926 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 65/304 (21%), Positives = 120/304 (39%), Gaps = 24/304 (7%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + + + L+ G T K + + G ++P + + + + Sbjct: 25 VFFNPQSIALI-GATDKPTSVGRRLLWNLIRNPFGGTVYPVNPKR---ASVLGIKAYHRL 80 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKAR 116 + E + + ++I VP I + + A + + ++ G + V + + Sbjct: 81 GDVPE--SVDLAIIAVPAPAVPSVIRDCVAAGVRGAIVVSAGFKEVGAVGIALEEEILSL 138 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + S RLIGPNC G++ P G +I G+VG +S+SG L + + +E +G Sbjct: 139 VRASGMRLIGPNCLGVMNPHVGFNGTFASAIANPGNVGFISQSGALCTSILDWSFRENVG 198 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S V +G + + D++ D T+SIV+ E G+ A FL + Sbjct: 199 FSAFVSVGS--MLDVGWGDLINYLGDDPKTDSIVIYMESIGN----ARAFLSAAREVAFT 252 Query: 237 KPIVGFVAGK-TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KPI+ AG+ A H GA+ G E A + G+ + + +L E Sbjct: 253 KPIIVIKAGRTQAAAAAAASHTGALT----GSDEVLDAAFRRCGVLRVDTIDDL-FNLSE 307 Query: 296 LLGS 299 +L Sbjct: 308 ILAK 311 >gi|282901587|ref|ZP_06309506.1| GCN5-related N-acetyltransferase [Cylindrospermopsis raciborskii CS-505] gi|281193513|gb|EFA68491.1| GCN5-related N-acetyltransferase [Cylindrospermopsis raciborskii CS-505] Length = 922 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 66/295 (22%), Positives = 115/295 (38%), Gaps = 21/295 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + K G+ G + P + + + T+++ E+ Sbjct: 33 VAVIGASEKPGSVGRTLLWNLITNPFNGTVFPINP---HRHSVLGIKAYPTISDISEK-- 87 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRL 124 + +VI P I + ++A I + I+ G + + + R+ Sbjct: 88 IDLAVIATPAPTVPKIIADCVQAGIKGAIIISAGFKEAGEKGIALEKEILSVAQGGKIRI 147 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPNC G++ P S + + GSVG LS+SG L + + QE +G S V +G Sbjct: 148 IGPNCLGMMNPISGLNATFASKMAQPGSVGFLSQSGALCTSILDWSLQENVGFSAFVSLG 207 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + + D++ D T+SIV+ E G+ A FL + KPI+ A Sbjct: 208 S--MLDISWGDLIYYLGDDPHTKSIVIYMESIGN----ARSFLSAAREVALTKPIIVIKA 261 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G+TA + ++G + A K G+ S + + + E+L Sbjct: 262 GRTAAAAKAAASHTGSLAGSDAVLD---AAFKRCGVLRVNSISDLFD-MSEVLAK 312 >gi|196232109|ref|ZP_03130964.1| Succinate--CoA ligase (GDP-forming) [Chthoniobacter flavus Ellin428] gi|196223831|gb|EDY18346.1| Succinate--CoA ligase (GDP-forming) [Chthoniobacter flavus Ellin428] Length = 168 Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats. Identities = 68/139 (48%), Positives = 93/139 (66%), Gaps = 1/139 (0%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSILV T++LVQG+TG G+ H + ++ Y TQ+V G+ P KG + VP+F Sbjct: 1 MSILVTPQTRLLVQGITGDFGSRHAKLSLDY-GTQLVAGVTPGKGGQTFEHNGHKVPIFD 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 TV EA ++T A S I+VPP A DAI+E ++A + L V ITEGIPV DMV+VKA ++ Sbjct: 60 TVGEAAKQTGATVSAIFVPPPFAADAILECVDAGLDLAVAITEGIPVSDMVKVKAAMQGR 119 Query: 121 SSRLIGPNCPGILTPDSCK 139 +RLIGPNCPG++TP + Sbjct: 120 KTRLIGPNCPGLVTPWHRR 138 >gi|220910350|ref|YP_002485661.1| CoA-binding domain-containing protein [Cyanothece sp. PCC 7425] gi|219866961|gb|ACL47300.1| CoA-binding domain protein [Cyanothece sp. PCC 7425] Length = 920 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 67/306 (21%), Positives = 123/306 (40%), Gaps = 30/306 (9%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVG---GIHPKKGSTYWTGGNVNVPVFT 60 + + T L+ G T + G+ G ++PK+ + + + Sbjct: 26 IFNPRTVALI-GATEQPGSVGRTLLWNLLSNPFGGTIFPVNPKRA------SVLGIKAYP 78 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVK 114 V+E E + +VI P I E + A + + I+ G + ++ Sbjct: 79 RVSEITE--PIDLAVIATPAPTVPGLIQECLSAGVRGAIIISAGFKEIGPAGQQLEQQIL 136 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 A++ S R+IGPNC G++ P + + G VG +S+SG L + + +E Sbjct: 137 AQIAGSQIRIIGPNCLGVMNPHTGLNATFGSGMALPGKVGFVSQSGALCTSVLDWSLKEK 196 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G S V +G + ++ D++ D T SI++ E G+ FL + Sbjct: 197 VGFSAFVSLG--AMVDVDWGDLIYYLGDDPHTHSILIYMESIGNP----RSFLSAAREVA 250 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSL 293 R KPI+ AG+T R A A +G G++ + A K G+ + + ++ Sbjct: 251 RTKPIIVIKAGQTEVAAR----AAASHTGSLAGSDAVLDAAFKRCGVLRVNRISEL-FNM 305 Query: 294 VELLGS 299 E+L Sbjct: 306 AEVLSK 311 >gi|305682431|dbj|BAJ16303.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi] Length = 144 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 99/145 (68%), Positives = 121/145 (83%), Gaps = 3/145 (2%) Query: 101 ITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSG 160 ITEGIPVLDM+++K L+ S +RLIGPNCPGI+TP+ CKIGIMPG I + GS+GI+SRSG Sbjct: 1 ITEGIPVLDMLKIKQVLKGSKTRLIGPNCPGIITPEQCKIGIMPGHIHKAGSIGIISRSG 60 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 TLTYEAV QT++ GLGQST +GIGGDP+ GT F+D L LFLAD+ T++I+++GEIGGSAE Sbjct: 61 TLTYEAVAQTTEVGLGQSTCIGIGGDPINGTSFVDCLALFLADDDTKAIIIIGEIGGSAE 120 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAG 245 EEAA FLK KKPIVGF+AG Sbjct: 121 EEAADFLKSSRI---KKPIVGFIAG 142 >gi|305682427|dbj|BAJ16301.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi] Length = 144 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 100/145 (68%), Positives = 121/145 (83%), Gaps = 3/145 (2%) Query: 101 ITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSG 160 ITEGIPVLDM+++K L+ S +RLIGPNCPGI+TP+ CKIGIMPG I + GS+GI+SRSG Sbjct: 1 ITEGIPVLDMLKIKQVLKGSKTRLIGPNCPGIITPEQCKIGIMPGHIHKAGSIGIISRSG 60 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 TLTYEAV QT++ GLGQST +GIGGDP+ GT F+D LELFLAD T++I+++GEIGGSAE Sbjct: 61 TLTYEAVAQTTEVGLGQSTCIGIGGDPINGTSFVDCLELFLADGDTKAIIIIGEIGGSAE 120 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAG 245 EEAA FLK KKPIVGF+AG Sbjct: 121 EEAADFLKSSRI---KKPIVGFIAG 142 >gi|305682421|dbj|BAJ16298.1| succinyl-CoA synthetase alpha chain [Orientia tsutsugamushi] Length = 144 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 99/145 (68%), Positives = 121/145 (83%), Gaps = 3/145 (2%) Query: 101 ITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSG 160 ITEGIPVLDM+++K L+ S +RLIGPNCPGI+TP+ CKIGIMPG I + GS+GI+SRSG Sbjct: 1 ITEGIPVLDMLKIKQVLKGSKTRLIGPNCPGIITPEQCKIGIMPGHIHKAGSIGIISRSG 60 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 TLTYEAV QT++ GLGQST +GIGGD + GT F+D LELFLAD+ T++I+++GEIGGSAE Sbjct: 61 TLTYEAVAQTTEVGLGQSTCIGIGGDTINGTSFVDCLELFLADDDTKAIIIIGEIGGSAE 120 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAG 245 EEAA FLK KKPIVGF+AG Sbjct: 121 EEAADFLKSSRI---KKPIVGFIAG 142 >gi|47204551|emb|CAF96059.1| unnamed protein product [Tetraodon nigroviridis] Length = 615 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 16/202 (7%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L K+TK +V G+ + G + + V ++P K YW + Sbjct: 414 TTLFGKHTKSIVWGMQTRAVQGMLDFDYVCSRLEPSVAAMVYPFTGDHKQKFYWGHKEIL 473 Query: 56 VPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRV 113 +PV+ ++EA ++ + + + A D+ +E+++ +I I I EGIP ++ Sbjct: 474 IPVYKNMSEAMKKHPDVDVLISFASLRSAFDSTMETMQYPQIHTIAIIAEGIPEAFTRKI 533 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYE 165 ++ +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 534 IKAADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNE 593 Query: 166 AVFQTSQEGLGQSTAVGIGGDP 187 S+ G V IGGD Sbjct: 594 LNNIISRTTDGVFEGVAIGGDR 615 >gi|300123828|emb|CBK25099.2| unnamed protein product [Blastocystis hominis] Length = 905 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 66/285 (23%), Positives = 116/285 (40%), Gaps = 20/285 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V + G + +AG+ + T GG+ P + + + + T+ + E+ Sbjct: 35 VALIGASERAGSVSRTILLNLLLTPFGGGVFPVNPTRS---KVLGIKAYKTIGDVPEQ-- 89 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKARLEKSSSRL 124 + +VI +P A+ E EA + I+ I+ G + K R+ Sbjct: 90 VDLAVICIPAKRVLGAVHECGEAGVRGIIIISAGFKEVGKEGAALEKACVEEAHKYGMRI 149 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPNC G + P + ++ KG V +S+SG L + + +EGLG S V IG Sbjct: 150 IGPNCLGAMVPITGLNASFASTMALKGEVAFISQSGALMCAMLDWSLKEGLGFSAFVSIG 209 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + + D++ F D T++I++ E G +A FL + +KPIV Sbjct: 210 S--MADVNWGDLIYYFGNDPNTKAIMIYMETIG----DARSFLSAAREVALRKPIVVIKP 263 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G+TA ++G + A K+AG+ + + Sbjct: 264 GRTAAAAAAAASHTGSLTGSD---DVLTAAFKKAGVVRVDTIDEL 305 >gi|116619310|ref|YP_821466.1| CoA-binding domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116222472|gb|ABJ81181.1| CoA-binding domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 912 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 120/303 (39%), Gaps = 22/303 (7%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 I T V V G T GT + G ++P + V + ++ Sbjct: 22 IFFKPKT-VAVIGATETPGTVGRTLFWNLVTSPFGGTVYPVNPKR---PSVLGVKAYASI 77 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKAR 116 ++ E + +VI PP I E E + + I+ G + ++ Sbjct: 78 SDIPEA--VDLAVIITPPPSIPGLIRECGENGVQGAIVISAGFKEIGPEGAELERQLLVE 135 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 +K+ R+IGPNC G+++P S ++ R GSVG +S+SG L + + +E +G Sbjct: 136 AQKAGIRIIGPNCLGVMSPLSGMNATFATAVARPGSVGFISQSGALCTAVLDWSLKEMVG 195 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S + +G + + D++ D T+SIV+ E G A FL + Sbjct: 196 FSAFISVGS--MVDVGWGDLIYYLGNDPKTKSIVIYMESIG----NARSFLSAAREVALT 249 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KPI+ G++A + ++G E A + +G+ + A + + E+ Sbjct: 250 KPIIIIKPGRSAAAAKAAASHTGSLTGSDEVLE---AAFRRSGVLRVNNIADL-FYMAEV 305 Query: 297 LGS 299 L Sbjct: 306 LSK 308 >gi|300175837|emb|CBK21833.2| unnamed protein product [Blastocystis hominis] Length = 905 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 66/285 (23%), Positives = 116/285 (40%), Gaps = 20/285 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V + G + +AG+ + T GG+ P + + + + T+ + E+ Sbjct: 35 VALIGASERAGSVSRTILLNLLLTPFGGGVFPVNPTRS---KVLGIKAYKTIGDVPEQ-- 89 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKARLEKSSSRL 124 + +VI +P A+ E EA + I+ I+ G + K R+ Sbjct: 90 VDLAVICIPAKRVLGAVHECGEAGVRGIIIISAGFKEVGKEGAALEKACVEEAHKYGMRI 149 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPNC G + P + ++ KG V +S+SG L + + +EGLG S V IG Sbjct: 150 IGPNCLGAMVPITGLNASFASTMALKGEVAFISQSGALMCAMLDWSLKEGLGFSAFVSIG 209 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + + D++ F D T++I++ E G +A FL + +KPIV Sbjct: 210 S--MADVNWGDLIYYFGNDPNTKAIMIYMETIG----DARSFLSAAREVALRKPIVVIKP 263 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G+TA ++G + A K+AG+ + + Sbjct: 264 GRTAAAAAAAASHTGSLTGSD---DVLTAAFKKAGVVRVDTIDEL 305 >gi|22298800|ref|NP_682047.1| hypothetical protein tlr1257 [Thermosynechococcus elongatus BP-1] gi|22294981|dbj|BAC08809.1| tlr1257 [Thermosynechococcus elongatus BP-1] Length = 905 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 112/297 (37%), Gaps = 23/297 (7%) Query: 10 KVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT 69 +V V G + K G+ Q+ G + P + + + +V E Sbjct: 25 RVAVIGASEKEGSVGRTLLWNLIQSPFGGTVFPVNPRRS---SVLGIKAYASVTAIPEA- 80 Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSR 123 + +VI P + + E A + + ++ G + + ++ R Sbjct: 81 -VDLAVIATPAATVPAVVAECAAAGVKGAIIVSAGFREVGAAGLALEEEILTIARQARLR 139 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 +IGPNC G++ P + ++ R G VG LS+SG L + + QE +G S V I Sbjct: 140 IIGPNCLGVMCPPTGLNATFAATMARSGHVGFLSQSGALCTSILDWSLQENVGFSAFVSI 199 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G + + D++ D T IV+ E G A FL + KPI+ Sbjct: 200 GT--MLDVGWGDLIYYLGDDPQTRCIVIYMESLG----NARSFLSAAREVAYIKPIIVIK 253 Query: 244 AGK-TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 AG+ A H GA++ G A++ G+ + + + E+L Sbjct: 254 AGRTAAAAQAAASHTGALM----GSDAVVDAALERCGVLRVETIEDLFD-MAEVLDK 305 >gi|282895347|ref|ZP_06303548.1| GCN5-related N-acetyltransferase [Raphidiopsis brookii D9] gi|281199598|gb|EFA74459.1| GCN5-related N-acetyltransferase [Raphidiopsis brookii D9] Length = 993 Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats. Identities = 66/295 (22%), Positives = 113/295 (38%), Gaps = 21/295 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + K G+ G + P + + + T+ + E+ Sbjct: 104 VAVIGASEKPGSVGRTLLWNLITNPFNGTVFPINP---HRHSVLGIKAYPTIFDISEK-- 158 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRL 124 + +VI P I + ++ I + I+ G + + + R+ Sbjct: 159 IDLAVIATPAPTVPKIIADCVQVGIKGAIIISAGFKEAGEKGIALEKEILSVAQGGKIRI 218 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPNC G++ P S I + GSVG LS+SG L + + QE +G S V +G Sbjct: 219 IGPNCLGMMNPISGLNATFASKIAQPGSVGFLSQSGALCTSILDWSLQENVGFSAFVSLG 278 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + + D++ D T+SIV+ E G+ A FL + KPI+ A Sbjct: 279 S--MLDISWGDLIYYLGDDPHTKSIVIYMESIGN----ARSFLSAAREVTLTKPIIVIKA 332 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G+TA + ++G + A K G+ S + + + E+L Sbjct: 333 GRTAAAAKAAASHTGSLAGSDAVLD---AAFKRCGVLRVNSISDLFD-MSEVLAK 383 >gi|119510362|ref|ZP_01629497.1| GCN5-related N-acetyltransferase [Nodularia spumigena CCY9414] gi|119464999|gb|EAW45901.1| GCN5-related N-acetyltransferase [Nodularia spumigena CCY9414] Length = 743 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 115/296 (38%), Gaps = 23/296 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + +A + G + P + + + T+ + E Sbjct: 41 VAVIGASERANSVGRTLLWNLISNPFGGTVFPVNPQR---HSTLGIKAYPTIFDVPEA-- 95 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRL 124 + +VI P I + ++A + + ++ G ++ + + R+ Sbjct: 96 VDLAVIATPAPTVPSIITQCVDAGVKSAIILSAGFKETGAEGITLEQQILEQAHRGKMRI 155 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPNC G+++P + ++ R G+VG +S+SG L + + E +G S V +G Sbjct: 156 IGPNCLGVMSPRTGLNATFASAMARPGNVGFISQSGALCTAILDWSFSENVGFSAFVSLG 215 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + + D++ D T+SIV+ E G + F+ + KPI+ A Sbjct: 216 S--MLDVGWGDLINYLGDDPHTKSIVIYMEAIG----DGRAFMSAARQVALTKPIIVIKA 269 Query: 245 GKT-APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G+T A H GA+ G + A + G+ S + + + ELL Sbjct: 270 GRTEAAAKAAASHTGALA----GSDQVLDAAFRRCGVLRVNSISDLFD-MAELLAK 320 >gi|149174218|ref|ZP_01852845.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein [Planctomyces maris DSM 8797] gi|148846763|gb|EDL61099.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein [Planctomyces maris DSM 8797] Length = 899 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 63/269 (23%), Positives = 102/269 (37%), Gaps = 22/269 (8%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPL 97 G ++P G + P + +V + E + +VI P D I + A I Sbjct: 42 GEVYPVNPRHARLGEH---PCYQSVLDLPE--PVDLAVICTPAQTIPDVIQQCGTAGIRG 96 Query: 98 IVCITEGIPVLDMVRVKARLEK-------SSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 IV ++ G + L+ S R+IGPNC GI+ P + Sbjct: 97 IVILSAGFRETGAAGKERELQVLSIARQFSGMRIIGPNCLGIMAPYVNLNASFATDMPLT 156 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G++ +S+SG L + QE +G S V +G + D+++ F D T+SI+ Sbjct: 157 GNIAFISQSGALCTAVLDWALQEKVGFSHFVSVGN--MLDVGIADLIDYFALDPQTKSII 214 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + E EA QF+ + KPI+ + AG+ + ++G E Sbjct: 215 LYVESIT----EARQFMSAARAFTKHKPIIAYKAGRFQESAKAASSHTGAMAGVDAVYE- 269 Query: 271 KINAMKEAGICIAPSPARIGRSLVELLGS 299 A AGI + ELL Sbjct: 270 --AAFARAGIVRVFELDDLFDC-AELLAR 295 >gi|37520644|ref|NP_924021.1| acetyl-CoA synthetase [Gloeobacter violaceus PCC 7421] gi|35211638|dbj|BAC89016.1| glr1075 [Gloeobacter violaceus PCC 7421] Length = 923 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 71/296 (23%), Positives = 116/296 (39%), Gaps = 23/296 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G T + G+ G + P + V + T+A ER Sbjct: 27 VAVIGATDRPGSVGRTILANLLSNPFGGTVFPVNPKR---PAVLGVKAYPTIAAVGER-- 81 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKARLEKSSSRL 124 +++ P + I EA +P + I+ G +V A K R+ Sbjct: 82 VELAIVVTPAATVPGVIRACAEAGVPGAIVISAGFRETGEAGAELERQVLAEARKGGMRI 141 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPNC G++ P G G++ G++ LS+SG L + + +E +G S V +G Sbjct: 142 VGPNCLGVMNPHLGFNGTFAGAMANPGNLAFLSQSGALCTSILDWSFREHVGFSAFVSMG 201 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + + D + D TESIV+ E G +A FL + KPI+ A Sbjct: 202 S--MLDVGWGDWIYYLGDDPRTESIVIYMESIG----DARSFLSAAREVAYTKPIIVIKA 255 Query: 245 GKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G+TA + H GA+ G E A + G+ S + + ++ E+L Sbjct: 256 GRTAAAAQAATSHTGALT----GSDEVLDAAFRRTGVLRVASISEL-FNMAEVLAK 306 >gi|108762179|ref|YP_632744.1| acetyltransferase [Myxococcus xanthus DK 1622] gi|108466059|gb|ABF91244.1| acetyltransferase, GNAT family [Myxococcus xanthus DK 1622] Length = 916 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 112/295 (37%), Gaps = 21/295 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G T + G+ G ++P G P ++ ER Sbjct: 40 VAVVGATERPGSVGRTVLWNLISNPFGGTVYPINPKRPNVLGIKAWP---SLGALPER-- 94 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRL 124 + +++ P I E E I + ++ G + + + + R+ Sbjct: 95 VDLAIVVTPARAVPGVIQECAELGIRGAIILSAGFKEIGAEGERLEQEILRLAQAAQVRI 154 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPNC G++ P S G++ R G+V +S+SG L + + +E +G S V +G Sbjct: 155 IGPNCLGVMRPPSGFNATFAGAMARPGNVAFISQSGALLTSILDWSLREAVGFSAFVSVG 214 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + + D+++ D T SI++ E G +A FL + KPI+ A Sbjct: 215 S--MLDVGWGDLIDFLADDPMTRSILLYMESIG----DARAFLSAAREVALTKPIIVIKA 268 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G+TA + ++G E A + G+ S A + + E L Sbjct: 269 GRTAQAAQAAASHTGSLTGSD---EVLSAAFRRTGVLRVDSIADL-FYMAETLAR 319 >gi|254445628|ref|ZP_05059104.1| acetyltransferase, GNAT family [Verrucomicrobiae bacterium DG1235] gi|198259936|gb|EDY84244.1| acetyltransferase, GNAT family [Verrucomicrobiae bacterium DG1235] Length = 892 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 116/291 (39%), Gaps = 21/291 (7%) Query: 5 VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 + + +V G T K GT ++ G ++P + + + V+ +++ Sbjct: 11 FNPQSIAVV-GATSKQGTVGRAFISNMVGSKYEGAVYPVNPKSR---SMMGMKVYPKLSK 66 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKARLE 118 + + ++I PP+ I E + I V ++ G + +V + Sbjct: 67 IPD--PIDLAIIATPPASVPALIEECGKCGIGAAVIVSAGFQEIGKKGEVLLRQVIRNAK 124 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 K+ RLIGPNC G + P ++ G + +S+SG L + + +E +G S Sbjct: 125 KAKVRLIGPNCLGFIRPPIGLNASFSSAMALPGRLAFISQSGALCTAVLDWSIRENVGFS 184 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + IG G + D+++ D T SI++ E + ++A +F+ G+ KP Sbjct: 185 HFISIGSMADIG--YHDLIDYLGQDPNTSSILIYME----SIKDARRFISASRSIGKTKP 238 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 IV G+++ + +SG E K +GI + + Sbjct: 239 IVVLKVGRSSEGAAAVSSHTGSLSGDDTLYEAL---FKRSGIARVDTVKEL 286 >gi|224012040|ref|XP_002294673.1| acetyl-coa synthetase [Thalassiosira pseudonana CCMP1335] gi|220969693|gb|EED88033.1| acetyl-coa synthetase [Thalassiosira pseudonana CCMP1335] Length = 973 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 64/300 (21%), Positives = 114/300 (38%), Gaps = 30/300 (10%) Query: 13 VQGLTGKAGTFHTEQAIL-----YCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 V G + K G+ + T ++P+K + + + +T V + Sbjct: 55 VIGASDKEGSVGRTLLWNLMRSPFGGTIYPINVNPRKKNIF------GIKSYTRVQDIPS 108 Query: 68 RTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKS 120 + +VI V + + +E I V I+ G V K Sbjct: 109 SDGQIDMAVIAVNAKHVKQVMEDCVEVGIKAAVIISAGFKETGAEGAQLEREVYEIACKG 168 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R++GPNC G++ P I + G+V +S+SG + + + Q +G S+ Sbjct: 169 KIRVVGPNCLGVMNPIVGLNATFATQIAKPGNVAFISQSGAMCTSILDWSLQANVGFSSF 228 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 V IG + + D++ D T++I + E G +A F+ ++ KPI+ Sbjct: 229 VSIGS--MLDVSWGDIIYYLGDDPNTKAIAIYMETIG----DARSFMSAASEVAMTKPII 282 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVELLGS 299 G+T A A +G G++D + A K G+ + +VELLG Sbjct: 283 VIKPGRTE----QAAAAAASHTGSLAGSDDVLDAAFKRCGVLRVNKIREVFE-IVELLGK 337 >gi|147837841|emb|CAN73796.1| hypothetical protein VITISV_018824 [Vitis vinifera] Length = 468 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 67/109 (61%), Positives = 82/109 (75%), Gaps = 5/109 (4%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+V+ QG+TGK GTFHTEQAI Y T++VGG+ PKKG G +P+F T Sbjct: 34 AVFVDKNTRVICQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGMEHLG----LPIFNT 88 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM 110 VAEAK T ANASVIYVPP A AI+E++EAE+ L+VCITEGIP DM Sbjct: 89 VAEAKAETRANASVIYVPPPFAAAAIMEAVEAELDLVVCITEGIPQHDM 137 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 64/137 (46%), Positives = 76/137 (55%), Gaps = 27/137 (19%) Query: 103 EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTL 162 EG+ A +S +RLIGPNCPGI+ P CKIGIMPG I + G VGI+SRSGTL Sbjct: 332 EGVSSARFKVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTL 391 Query: 163 TYEAV---------------------------FQTSQEGLGQSTAVGIGGDPVKGTEFID 195 TYEA+ FQT+ GLGQST VGIGGDP GT F+D Sbjct: 392 TYEAIKRXFVVSYCTNPFVAHTDPITILADLVFQTTAVGLGQSTCVGIGGDPFNGTNFVD 451 Query: 196 VLELFLADEATESIVMV 212 ++ FLAD TE + Sbjct: 452 CVKKFLADPQTEGKFSM 468 >gi|213621813|ref|ZP_03374596.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 114 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 66/119 (55%), Positives = 84/119 (70%), Gaps = 5/119 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T V+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTNVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDE 114 >gi|162452357|ref|YP_001614724.1| Acyl-activating enzyme [Sorangium cellulosum 'So ce 56'] gi|161162939|emb|CAN94244.1| Acyl-activating enzyme [Sorangium cellulosum 'So ce 56'] Length = 914 Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 110/294 (37%), Gaps = 17/294 (5%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G T +G G ++P + + + ++A + Sbjct: 31 VAVIGATENSGAVGRTVLWNLISNPFGGTVYPVNPKR---QSVLGIKAYPSIAAVPAK-- 85 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-----PVLDMVRVKARLEKSSSRLI 125 + +V+ P + I E ++A +P + I+ G P + + R + R+I Sbjct: 86 VDLAVLVTPAASVPGLIGECVDAGVPGAIIISAGFKEMGPPGVQLERQIMERARGKMRII 145 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 GPNC G++ P R G V +S+SG L + + QE +G S V +G Sbjct: 146 GPNCLGVMNPIGGLNATFAKGQARPGKVAFISQSGALCTAVLDWSIQEQVGFSAFVSVGS 205 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 + + D+++ D T SI++ E G +A FL + KPI+ G Sbjct: 206 --MLDVGWGDLIDHLGNDPKTSSILIYMESIGDPR-DARAFLSAAREVALTKPIIVIKPG 262 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++ + ++G + A + G+ A + S+ E L Sbjct: 263 RSEAAAKAAASHTGSLTGSDEVLD---AAFRRVGVLRVNDIADL-FSMAETLAK 312 >gi|94970033|ref|YP_592081.1| CoA-binding protein [Candidatus Koribacter versatilis Ellin345] gi|94552083|gb|ABF42007.1| CoA-binding protein [Candidatus Koribacter versatilis Ellin345] Length = 912 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 116/294 (39%), Gaps = 20/294 (6%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G T + G+ + G ++P + V + ++A+ ER Sbjct: 34 VAVIGATERVGSVGRSVLWNILSSPFGGTLYPVNPKR---NNILGVRAYKSIADLPERPE 90 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV-----LDMVRVKARLEKSSSRLI 125 V+ P I E+++ + + I+ G + +R+ + R+I Sbjct: 91 --LVVVTTPADSVPGIIQEAVDNGVTAGIVISAGFKEFGEHGKQLEHEISRIIRGKMRII 148 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 GPNC G++ P +I R G+V +S+SG L + + +E +G S+ V IG Sbjct: 149 GPNCLGVMNPIKGLNATFANTIARPGNVAFISQSGALCTAVLDWSLKENVGFSSFVSIGS 208 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 + ++ D++ D T +IV+ E G A FL + KPI+ AG Sbjct: 209 --MLDVDWGDLISYLGNDPRTHAIVIYMESIG----NARSFLSAAREVSLTKPIIVIKAG 262 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 +TA + ++G + A + G+ + A + + ++L Sbjct: 263 RTAAAAKAAASHTGSLTGSDEVLD---AAFRRVGVLRVNTIADV-FYMTDVLAK 312 >gi|213027469|ref|ZP_03341916.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 118 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 66/119 (55%), Positives = 84/119 (70%), Gaps = 5/119 (4%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+T V+ QG TG GTFH+EQAI Y TQ+VGG+ P KG T G +PVF Sbjct: 1 MSVLINKDTNVICQGFTGSQGTFHSEQAIAY-GTQMVGGVTPGKGGTTHLG----LPVFN 55 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 TV EA E T A ASVIYVP D+I+E+I+A I LI+ ITEGIP LDM+ VK +L++ Sbjct: 56 TVREAVEATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDE 114 >gi|84489718|ref|YP_447950.1| acyl-CoA synthetase [Methanosphaera stadtmanae DSM 3091] gi|84373037|gb|ABC57307.1| predicted acyl-CoA synthetase [Methanosphaera stadtmanae DSM 3091] Length = 700 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 109/278 (39%), Gaps = 21/278 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G T I G I+P T G + +P + TV+E + + +VI Sbjct: 23 GKVGYIITTNLIECG---YGGNIYPVNTKT--DGKLLGLPAYKTVSEI-DDDNIDLAVIS 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPG 131 +P + E + I I+ IT G + K +K + GPNC G Sbjct: 77 IPARFINQTLEECGQKGIKNIIVITAGFKEVGGEGAKLEDEMAEIAKKYDMNIQGPNCLG 136 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 L ++ +KG++ +S+SG +T + + EG+G S V +G Sbjct: 137 SLDTNTPMNASFAQLSPKKGNIAFVSQSGAMTVAILDWSVSEGIGFSKVVSLGNK--VDV 194 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 ID++E D+ T+ I+ E E +FL+ + + KP+V AG + Sbjct: 195 SEIDLIEYLATDDQTKVILCYLEGISDGE----RFLEVMRRVTKIKPVVILKAGSSQAGA 250 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + + ++G + A + G+ A S + Sbjct: 251 KAVSSHTGALAGNDSAFD---AAFENCGVMRARSMNDL 285 >gi|326904826|gb|EGE51759.1| LOW QUALITY PROTEIN: hypothetical protein TBPG_02745 [Mycobacterium tuberculosis W-148] Length = 137 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 67/138 (48%), Positives = 92/138 (66%), Gaps = 8/138 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN-----VN 55 MSI + ++ KV+VQG+TG T HT + +L TQ+VGG++ +K T T + + Sbjct: 1 MSIFLSRDNKVIVQGITGSEATVHTAR-MLRAGTQIVGGVNARKAGTTVTHEDKGGRLIK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 +PVF +VAEA E+T A+ S+I+VPP+ A DAIIE+I+AEIPL+V ITEGIPV D A Sbjct: 60 LPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWA 119 Query: 116 RL--EKSSSRLIGPNCPG 131 +R+IGPNCPG Sbjct: 120 YNLEAGHKTRIIGPNCPG 137 >gi|121602974|ref|YP_980303.1| GCN5-like N-acetyltransferase [Polaromonas naphthalenivorans CJ2] gi|120591943|gb|ABM35382.1| GCN5-related N-acetyltransferase [Polaromonas naphthalenivorans CJ2] Length = 896 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 62/250 (24%), Positives = 104/250 (41%), Gaps = 12/250 (4%) Query: 47 TYWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI 105 +TG + + TT A +T A+ ++I +PP A+ + + IT GI Sbjct: 42 QKYTGTLQFLDIHTTGTLADLAQTGADLAIIALPPQEVAAALEIAGRLTCRSALVITSGI 101 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 +K + L+GPN G+ P G + + GS+ ++S+SG LT Sbjct: 102 NADGAAELKRIARREGIFLLGPNGLGLQRPHLQLNASAAGPMAKPGSLALVSQSGALTAS 161 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + S+ G+G S+ V +G P + VL+ D T+SIV+ E S A + Sbjct: 162 ILDWASKNGVGFSSVVSLG--PNTSVDIAQVLDFLANDRQTQSIVIYLEGISS----ARR 215 Query: 226 FLKDEAKRGRKKPIVGFVAG-KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 F+ KP+V AG + A H+GA++ G + A++ AG Sbjct: 216 FMSALRSAANAKPVVVLKAGRRPAGNEAAQTHSGAIV----GSDDVFDAALRRAGAVRVR 271 Query: 285 SPARIGRSLV 294 S + + Sbjct: 272 SFVELFSAAK 281 >gi|269926006|ref|YP_003322629.1| CoA-binding domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269789666|gb|ACZ41807.1| CoA-binding domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 915 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 112/296 (37%), Gaps = 23/296 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + + G+ G + P + + + +V + ++ Sbjct: 32 VAVIGASEEPGSVGRTVLWNLISNPFGGTVFPVN---IRRSSVLGIKAYRSVLDIPDQ-- 86 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRL 124 A+ +VI PP I E + I + ++ G K S R+ Sbjct: 87 ADMAVIATPPQTVPQVISECSQVGIKGAIILSAGFRERGEEGKKLESEILDIARTSGMRI 146 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPNC GI+ P + SI + GSVG +S+SG L + + +E +G S + IG Sbjct: 147 IGPNCLGIMRPPTGLNATFAASIAKPGSVGFISQSGALCTAILDWSLRENVGFSAFISIG 206 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + + D++ D T SI++ E G +A FL + KP++ A Sbjct: 207 S--MLDISWSDLIYYLGDDPHTNSILLYIESVG----DARSFLSAVREIALTKPVIIVKA 260 Query: 245 GKTA-PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G+T H GA+ + A++ G S + + + E+L Sbjct: 261 GRTEAAAKAAASHTGALA----ESDDVFDAAIRRVGALRVNSISDL-FYISEVLSK 311 >gi|220922715|ref|YP_002498017.1| CoA-binding domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219947322|gb|ACL57714.1| CoA-binding domain protein [Methylobacterium nodulans ORS 2060] Length = 902 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 70/294 (23%), Positives = 113/294 (38%), Gaps = 20/294 (6%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 + + +V V + G + T Y VV G P + +PV+ V Sbjct: 21 IATREDRVCVLNILGGESSDVTPVGHAYSGGNVVFGTSPGRRGQGLETPLGEIPVYNNVR 80 Query: 64 EAKER-TAANASVIYVPPSGAGDAIIESI--EAEIPLIVCITEGIPVLDMVRVKARLEKS 120 E E N V+Y+PP+GA D + E I ++ I +TE + V D ++A +++ Sbjct: 81 EGLEAGHRFNCGVVYLPPAGARDGVAELIRVNPDLRKIFIVTEKLSVHDSREIRALGQQN 140 Query: 121 SSRLIGPNCPGILTP------DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + G N G+ G PG + GS+ I S SG T G Sbjct: 141 GVDIFGGNSLGVADAYHQVRIGGALGGDSPGEALKPGSIAIFSNSGNFTTTIATYLRMSG 200 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 G +T + G D + D +++ V+ E GG E +A Sbjct: 201 WGTTTLISSGKDVYIQYAAPEFAFALANDARSKAAVLYVEPGGYYERDA----------H 250 Query: 235 RKKPIVGFVAGKTAPP-GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 KP+V V G+ R +GHAGA+ G A + +++ G+ +P Sbjct: 251 FTKPVVACVVGRWKSRLTRAVGHAGAMAGGDDDAAAKERWFLEKFGVASVFTPD 304 >gi|186470803|ref|YP_001862121.1| CoA-binding domain-containing protein [Burkholderia phymatum STM815] gi|184197112|gb|ACC75075.1| CoA-binding domain protein [Burkholderia phymatum STM815] Length = 895 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 82/295 (27%), Positives = 122/295 (41%), Gaps = 18/295 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 ++ + + +V V + G + T + + VV G P KG ++PVF Sbjct: 18 LADIATREDRVCVLNILGGESSDVTPVSHAFSGANVVFGTAPGKGGQVLATPAGDIPVFN 77 Query: 61 TVAEAKER-TAANASVIYVPPSGAGDAIIESI--EAEIPLIVCITEGIPVLDMVRVKARL 117 V E E N V+Y+PPS A D + E I ++ I ITE I V D ++A Sbjct: 78 NVREGLEAGHRFNCGVVYLPPSAARDGVAELIRVNPDLRKIFIITEKIAVHDAREIRAMG 137 Query: 118 EKSSSRLIGPNCPGILTPDS-CKI-GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 +++ + G N G+ +I G PG+ R+GSV I S SG + G Sbjct: 138 QQAGIDIFGANGLGVADSWQRVRIGGDDPGATLRQGSVAIFSNSGGFSTTIAQYLRMSGW 197 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G ST + G D + D +++ V+ E GG E +A Sbjct: 198 GTSTVISSGKDVYIHYAAPEFAFALANDARSKAAVLYCEPGGYYEADA----------HF 247 Query: 236 KKPIVGFVAGKTAPP-GRTMGHAGAVISGGKGGAEDKINAMKE-AGICIAPSPAR 288 KP+V V G+ R +GHAGA+ SGG A K KE G+ +P Sbjct: 248 NKPVVACVVGRWKSRLTRAVGHAGAM-SGGADDALAKERWFKEKFGVERLFTPDD 301 >gi|258591244|emb|CBE67541.1| Acetyl-CoA synthetase / acetyltransferase (GNAT) family protein [NC10 bacterium 'Dutch sediment'] Length = 888 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 61/287 (21%), Positives = 109/287 (37%), Gaps = 25/287 (8%) Query: 17 TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVI 76 TG G E + ++PK+ + + + VA E + +VI Sbjct: 22 TGSVGRAIMENLFTQKTASIF-PVNPKRK------KILGMDAYARVAAVPE--PIDLAVI 72 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRLIGPNCP 130 P D + E EA + +V I+ G + R++A ++ R+IGPNC Sbjct: 73 ATPAPTVPDLVSECGEAGVGGLVIISAGFKEIGEKGKGLEDRIQATRKRYGMRIIGPNCL 132 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G++ P + G + +S+SG L + +G S +G + Sbjct: 133 GVIRPMTGLNASFLNVRPEAGRIAFISQSGALGSAILDWAMHAHIGFSLFASLGS--MMD 190 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 +F D+++ D T+SI++ E G+ A +F+ R KPI+ G+ A Sbjct: 191 VDFGDLIDFLGDDPNTKSIMLYMEGIGN----AKKFISAAKGFARNKPIIVLKPGRFAES 246 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 R + G + A K G+ A + ++ E+L Sbjct: 247 ARAAFSHTGSMGGEDRTCD---AAFKRVGVVRVRDIADL-FNVAEVL 289 >gi|11498810|ref|NP_070039.1| hypothetical protein AF1211 [Archaeoglobus fulgidus DSM 4304] gi|2649370|gb|AAB90033.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 685 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 108/278 (38%), Gaps = 25/278 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + + T ++PK + P + +V + E + ++I Sbjct: 20 GKVGNTIMKNLRNFSGTVYA--VNPK------YREILGFPCYPSVLKIPE--NVDLAIIV 69 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPG 131 VP A+ E ++ V I+ G + K E+ +L+GPNC G Sbjct: 70 VPAKLVPKAVEECGRKDVEGAVVISAGFKEAGIEGAKLERELVEVAERYGVKLVGPNCLG 129 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ + KG + LS+SG + + + G+G S V +G + Sbjct: 130 MINTEIAMNATFSRVAPEKGRIAFLSQSGAFILAVLEWSKRNGVGFSKVVSLGNKAMLDE 189 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 D LE D++T+ I++ E E+ +F++ R+KP+V AGK+ Sbjct: 190 S--DFLEYLAKDDSTDVILIYME----GVEDGRKFMRVAKSVARRKPVVVMKAGKSQSGA 243 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + ++ G E A +++G+ A S + Sbjct: 244 KAASSHTGSLA---GSYEAYRAAFRQSGVIEASSVEEL 278 >gi|154252417|ref|YP_001413241.1| CoA-binding domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154156367|gb|ABS63584.1| CoA-binding domain protein [Parvibaculum lavamentivorans DS-1] Length = 893 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 61/285 (21%), Positives = 104/285 (36%), Gaps = 23/285 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G G + V ++P+ G V V+ VA + +VI Sbjct: 25 GSVGNVLLRNLLAAGLPGPVWAVNPR------GGRIGEVEVYKDVASLP--GTPDLAVIA 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPG 131 PP I E V IT G L + + R+ GPNC G Sbjct: 77 TPPQTVPGLISELGARGTKAAVVITAGFGELGEKGRALQAEMLEAAKPHLLRIAGPNCLG 136 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 I+TP + KG+V +S+SG + + + G+G S +GG + Sbjct: 137 IMTPGNGLNASFGHVQPEKGNVAFVSQSGAVVTAVLDWATSRGIGFSHVASLGG--MSDV 194 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ AD T+SI++ E +A +F+ + R KP++ +G+ Sbjct: 195 DFGDMLDFLAADPHTKSILLYIESV----RDARKFMSAGRQASRLKPVIVIKSGRHEAGA 250 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 R ++G + A + AG+ + ++ L Sbjct: 251 RAAASHTGALAGSDAVYQ---AAFRRAGMLREDGIEDLFDAVETL 292 >gi|85859779|ref|YP_461981.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein [Syntrophus aciditrophicus SB] gi|85722870|gb|ABC77813.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein [Syntrophus aciditrophicus SB] Length = 918 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 100/267 (37%), Gaps = 24/267 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PKK + F +A+ E + +VI P + + + A I + Sbjct: 58 PVNPKKK------VILGRKCFENIADISE--PVDLAVIATPAKEVPELVEDCGRAGIGGL 109 Query: 99 VCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 V I+ G + A +K R++GPNC G + P+ + G Sbjct: 110 VIISAGFKEIGEEGRLLEERITASRKKYGMRILGPNCLGFVRPNEGLNATFLKTNPPPGH 169 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 + +S+SG L + E +G S +G + +F D+++ D T SI++ Sbjct: 170 IAFISQSGALGSAILDWAVNEHVGFSMFASLG--AMSDVDFGDLIDFLGEDPDTRSILLY 227 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 E G+ A +F+ +KPI+ G+ + ++G E Sbjct: 228 MEGVGN----AKKFMSAARAFAMRKPIIVIKPGRFTESAQAARSHTGAMAGDDAIYE--- 280 Query: 273 NAMKEAGICIAPSPARIGRSLVELLGS 299 A K AG+ A + E+L S Sbjct: 281 AAFKRAGVLRVKEIADLFDC-AEILDS 306 >gi|87308769|ref|ZP_01090908.1| GCN5-related N-acetyltransferase [Blastopirellula marina DSM 3645] gi|87288480|gb|EAQ80375.1| GCN5-related N-acetyltransferase [Blastopirellula marina DSM 3645] Length = 895 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 66/281 (23%), Positives = 110/281 (39%), Gaps = 23/281 (8%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + G+ G I+P ++P F VA+ E Sbjct: 15 VAVIGASRTLGSVGNTVIKNLLSGGFQGTIYPINPKY---DTIEDLPAFGKVADLPE--T 69 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-------PVLDMVRVKARLEKSSSR 123 + +VI +P +G I E +V I+ G L+ + A + R Sbjct: 70 PDLAVICIPAAGVPGLIEEIGAKGTRGVVIISAGFRETGAAGSELEDQILAAAAKFDGLR 129 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 +IGPNC G+++ S G VG +S+SG L + + Q+ +G S + + Sbjct: 130 IIGPNCLGVMSTSVHLNASFAASSPLPGRVGFISQSGALCTSVLDWSLQKNIGFSHFISV 189 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G + + D+++ D T+SI++ E E+ +F+ R+KPI+ + Sbjct: 190 GN--MLDVQIGDLIDYMANDPHTDSIILYVESIS----ESREFMSAARAFARQKPIIAYK 243 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIA 283 AG+ A A A +G G + A K AGI Sbjct: 244 AGRFAESA----QAAASHTGALAGVDAVYEAAFKRAGIVRV 280 >gi|46447204|ref|YP_008569.1| hypothetical protein pc1570 [Candidatus Protochlamydia amoebophila UWE25] gi|46400845|emb|CAF24294.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 920 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 60/305 (19%), Positives = 114/305 (37%), Gaps = 25/305 (8%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I K V+ G G+ G I+P ++ P ++ Sbjct: 25 AIFYPKTIAVI--GAKDDFGSVGATIMNNLTNGLFKGKIYPINPKRDRILDLISFPSISS 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------A 115 V E + ++I P I E + A++ + I+ G L K Sbjct: 83 VPEVV-----DLAIIVTPALTVPKIIKECVNAKVKSAIIISAGFKELGEAGKKLEEEILF 137 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 ++ +IGPNC GI+ P + + G + +S+SG + + + QE + Sbjct: 138 YAKQGPLSIIGPNCLGIMNPHTGLNASFAKGLALPGQLAFISQSGAMCTAVLDWSWQEKV 197 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S+ V IG + + +++ F +D T S+++ E G +A F+ + Sbjct: 198 GFSSFVSIGS--MADVNWGTLIDYFGSDPHTSSLLLYMETIG----DARSFMTAAREVAL 251 Query: 236 KKPIVGFVAGKTA-PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 +KPI+ AG+ H G++ G E A++ G+ + + S+ Sbjct: 252 EKPIIVIKAGRCQAAANAAASHTGSLA----GSDEVFDAALERIGVLRVNHISEL-FSMA 306 Query: 295 ELLGS 299 +L Sbjct: 307 SVLAR 311 >gi|196231237|ref|ZP_03130096.1| CoA-binding domain protein [Chthoniobacter flavus Ellin428] gi|196224573|gb|EDY19084.1| CoA-binding domain protein [Chthoniobacter flavus Ellin428] Length = 902 Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats. Identities = 62/267 (23%), Positives = 105/267 (39%), Gaps = 22/267 (8%) Query: 37 VGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIP 96 V ++PK + VP F ++ E + +++ P S + E A + Sbjct: 53 VFAVNPK------HKTVLGVPAFASIGAIPE--PIDLAIVATPASTVPAILGECAAAGVK 104 Query: 97 LIVCITEGIPVLD----MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 V I+ G + + ++ R++GPNC G++ P S+ R G Sbjct: 105 GAVIISAGFKETGASGAELERQILAQRGHMRVLGPNCLGVMLPHIGLNATFAASMARAGK 164 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 V LS+SG L + + +E +G S V +G G + D++E F D T+SIV Sbjct: 165 VAFLSQSGALCTAILDWSLREEVGFSAFVSLGSMLDIG--WGDLIEFFGDDPQTKSIVCY 222 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 E G +A FL + KPIV G+T R ++G + Sbjct: 223 MESVG----DARTFLSAAREVAFSKPIVVIKVGRTEAAARAAASHTGSLTGSDAVLD--- 275 Query: 273 NAMKEAGICIAPSPARIGRSLVELLGS 299 A + AG+ + + + E+L Sbjct: 276 AAFRRAGVVRVETIEELFD-IAEVLAK 301 >gi|120611483|ref|YP_971161.1| GCN5-like N-acetyltransferase [Acidovorax citrulli AAC00-1] gi|120589947|gb|ABM33387.1| GCN5-related N-acetyltransferase [Acidovorax citrulli AAC00-1] Length = 897 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 63/281 (22%), Positives = 112/281 (39%), Gaps = 16/281 (5%) Query: 16 LTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEA-KERTAANAS 74 + AG + T +H + + G + + T+ A +T A+ + Sbjct: 16 IAVFAGQVDAPDTL----TACARALHAHLRAQRFQGTLQFLDIHTSGTLADLAQTRADLA 71 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILT 134 VI +PP A A+ + + ++ GI +++K + L+GPN G+ Sbjct: 72 VIALPPQDAPAALEVAGRIGCRAALVLSHGIDADGALKLKKIARREGVHLLGPNSLGLQR 131 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 P G + R+GS+ ++ +SG LT + + +G ST V +G P + Sbjct: 132 PHLQLNASAAGPLAREGSLALVCQSGALTASILDWAHKNAVGFSTVVSLG--PNTDVDIA 189 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK-TAPPGRT 253 VL+ D T+SIV+ E GS A +F+ KP+V AG+ A Sbjct: 190 QVLDFLANDGRTQSIVVYMEGIGS----ARRFMSALRSAANAKPVVVLKAGRKPAGNEAA 245 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 H+G ++ G + A++ AG S + + Sbjct: 246 QTHSGTIV----GSDDVFDAALRRAGAVRVRSFVELFSAAK 282 >gi|332239320|ref|XP_003268852.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial-like [Nomascus leucogenys] Length = 156 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 89/146 (60%), Positives = 115/146 (78%) Query: 154 GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVG 213 GI+SRSGTLTYEAV QT+Q GLGQS VGIGGDP GT+FID LE+FL D ATE I+++G Sbjct: 7 GIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTDFIDCLEIFLNDSATEGIILIG 66 Query: 214 EIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN 273 EIGG+AEE AA+FLK KP+V F+AG TAPPGR MGHAGA+I+GGKGGA++KI+ Sbjct: 67 EIGGNAEENAAEFLKQHNSGPNSKPVVSFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKIS 126 Query: 274 AMKEAGICIAPSPARIGRSLVELLGS 299 A++ AG+ ++ SPA++G ++ + Sbjct: 127 ALQSAGVVVSMSPAQLGTTIYKEFEK 152 >gi|294508161|ref|YP_003572219.1| Acyl-CoA synthetase (NDP forming) [Salinibacter ruber M8] gi|294344489|emb|CBH25267.1| Acyl-CoA synthetase (NDP forming) [Salinibacter ruber M8] Length = 940 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 65/305 (21%), Positives = 113/305 (37%), Gaps = 25/305 (8%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I KN V V G + G+ G + P + + + Sbjct: 55 AIFEPKN--VAVIGASESPGSVGRTLLWNLVSNPFGGTVFPVNPKR---DSVLGIEAYEG 109 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKA 115 + + +VI P + + EA + +V ++ G + +K Sbjct: 110 IGAV--EADVDLAVIATPAPTVPGIVEQCGEAGVEGLVIVSAGFREVGEEGAALERDIKD 167 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 R++GPNC GI+ P + GS+ +G V +S+SG L + + +E + Sbjct: 168 IARTHGIRIVGPNCLGIMRPPNGLNATFAGSMANEGDVAFVSQSGALLTSILDWSFRENV 227 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S+ V IG + ++ D++E D TESIV+ E G+ A FL + Sbjct: 228 GFSSFVSIGS--MLDVDWGDMIEYLGDDPKTESIVLYMESIGN----ARSFLSAARDVAQ 281 Query: 236 KKPIVGFVAGK-TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KPI+ AG+ A H G + G A + +G+ + + Sbjct: 282 SKPIIVIKAGRTDAAAEAAASHTGTLT----GSDAVLNAAFRRSGVLRVDDINDL-FYMA 336 Query: 295 ELLGS 299 E+L Sbjct: 337 EVLSK 341 >gi|82617306|emb|CAI64211.1| probable acetyl-CoA synthetase [uncultured archaeon] Length = 895 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 104/277 (37%), Gaps = 20/277 (7%) Query: 13 VQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAAN 72 V G + G+ G ++P + + ++++ R + Sbjct: 17 VIGASNTKGSVGYMLLHNLIGVGYEGVVYPVNNRRS---SVQGIHAYGSISQIPAR--ID 71 Query: 73 ASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIG 126 ++I VP + D + E A + ++ I+ G + K + R+IG Sbjct: 72 LAIIAVPATHVPDILEECGVAGVGGVIIISAGFKEIGKEGRKLEERIGKIARRYGIRIIG 131 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNC GI+ P + GSV +S+SG L + + +G S V IG Sbjct: 132 PNCLGIIMPRFSLNASFAHLMPEHGSVAFISQSGALCTAVLDMCAHRHIGFSAFVSIGS- 190 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + +F D+++ F D AT SI++ E ++ +F+ + KPI+ +G+ Sbjct: 191 -MLDVDFGDLIDYFGMDPATGSIMLYIESL----KDVREFMSAARHFAKNKPIIVVKSGR 245 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 A + ++G + A K AG Sbjct: 246 FARSAKAAASHTGALAGDDNFYD---AAFKRAGAIRV 279 >gi|212224464|ref|YP_002307700.1| acetyl-CoA synthetase II (NDP forming), alpha subunit [Thermococcus onnurineus NA1] gi|212009421|gb|ACJ16803.1| acetyl-CoA synthetase II (NDP forming), alpha subunit [Thermococcus onnurineus NA1] Length = 459 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 108/258 (41%), Gaps = 21/258 (8%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPL 97 G ++P G V + V + + +V+ VP II+ E + Sbjct: 38 GKVYPVNVKDEVVQG---VKAYKNVKDIPDE--VELAVVVVPKRFVKQTIIDCGEKGVKG 92 Query: 98 IVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 I+ IT G + + + R++GPNC GI+ + + +KG Sbjct: 93 IILITAGFGEVGEDGKREERELVEIAHRYGMRIVGPNCVGIMNTHNDMNATFVAN-AKKG 151 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 + +S+SG L +++T +EG+G S V IG + +F + +E D +++I + Sbjct: 152 DIAFISQSGALGAGIIYKTIKEGIGFSKFVSIGN--MADVDFAEFMEYLANDPESKAIAL 209 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDK 271 E ++ +F++ + +KKP++ AGK+ R ++G E Sbjct: 210 YIE----GIKDGRKFMEVAKRVTKKKPVIVLKAGKSESGARAASSHTGSLAGSYKIYE-- 263 Query: 272 INAMKEAGICIAPSPARI 289 A K++GI +A + + Sbjct: 264 -AAFKQSGIIVADTIDDM 280 >gi|83814189|ref|YP_446229.1| acetyltransferase [Salinibacter ruber DSM 13855] gi|83755583|gb|ABC43696.1| acetyltransferase, GNAT family [Salinibacter ruber DSM 13855] Length = 916 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 65/305 (21%), Positives = 113/305 (37%), Gaps = 25/305 (8%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +I KN V V G + G+ G + P + + + Sbjct: 31 AIFEPKN--VAVIGASESPGSVGRTLLWNLVSNPFGGTVFPVNPKR---DSVLGIEAYEG 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKA 115 + + +VI P + + EA + +V ++ G + +K Sbjct: 86 IGAV--EADVDLAVIATPAPTVPGIVEQCGEAGVEGLVIVSAGFREVGEEGAALERDIKD 143 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 R++GPNC GI+ P + GS+ +G V +S+SG L + + +E + Sbjct: 144 IARTHGIRIVGPNCLGIMRPPNGLNATFAGSMANEGDVAFVSQSGALLTSILDWSFRENV 203 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S+ V IG + ++ D++E D TESIV+ E G+ A FL + Sbjct: 204 GFSSFVSIGS--MLDVDWGDMIEYLGDDPKTESIVLYMESIGN----ARSFLSAARDVAQ 257 Query: 236 KKPIVGFVAGK-TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KPI+ AG+ A H G + G A + +G+ + + Sbjct: 258 SKPIIVIKAGRTDAAAEAAASHTGTLT----GSDAVLNAAFRRSGVLRVDDINDL-FYMA 312 Query: 295 ELLGS 299 E+L Sbjct: 313 EVLSK 317 >gi|242398140|ref|YP_002993564.1| Acetyl-CoA synthetase II (ACSII, ADP-forming), subunit alpha [Thermococcus sibiricus MM 739] gi|242264533|gb|ACS89215.1| Acetyl-CoA synthetase II (ACSII, ADP-forming), subunit alpha [Thermococcus sibiricus MM 739] Length = 457 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 21/260 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P V + V E + +VI VP A+++ E + Sbjct: 38 YEGKVYPINIKEE---TVQGVKAYKNVKNIPE--DVDLAVIVVPKRFVKQALMDCGEKGV 92 Query: 96 PLIVCITEGIPVLDMVR------VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 + IT G + + +K R+IGPNC G++ S + + Sbjct: 93 KGAIIITAGFGEMGEEGKREERELVEIAQKYGIRIIGPNCVGVMDTHSNMNATFIMN-AK 151 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 KGSV +S+SG L V++T +E +G S + +G + +F D++E D ++SI Sbjct: 152 KGSVAFVSQSGALGAGIVYKTIKEDIGFSKFISVGN--MADVDFADLMEYLAEDNNSKSI 209 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 + E + +F++ K +KKPI+ AGK+ R ++G + Sbjct: 210 ALYIE----GIKNGKKFMEIAKKVSKKKPIIALKAGKSESGARAASSHTGSLAGSYAIYD 265 Query: 270 DKINAMKEAGICIAPSPARI 289 A +++G+ +A + + Sbjct: 266 ---AAFRQSGVLVAETIDDL 282 >gi|315231078|ref|YP_004071514.1| acetyl-CoA synthetase subunit alpha [Thermococcus barophilus MP] gi|315184106|gb|ADT84291.1| acetyl-CoA synthetase (ADP-forming) alpha chain [Thermococcus barophilus MP] Length = 454 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 21/258 (8%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPL 97 G ++P G V + V + + +VI VP +I+ E + Sbjct: 38 GRVYPVNVKDEVVQG---VKAYKNVRNIPDE--VDLAVIVVPKRFVKQTVIDCGEKGVKG 92 Query: 98 IVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 IV IT G + + K R+IGPNC GI+ + ++G Sbjct: 93 IVLITAGFGETGEEGKREEKELVEIAHKYGMRIIGPNCVGIMNTHNDMNATFIM-DAKRG 151 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 + +S+SG L V++T +EG+G S + IG + +F +++E DE +++I + Sbjct: 152 DIAFVSQSGALGAGIVYKTVKEGIGFSKFISIGN--MADVDFSELMEYLADDEESKAIAL 209 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDK 271 E ++ +F++ K +KKP++ AGK+ R ++G E Sbjct: 210 YIE----GVKDGRKFMEAAKKVTKKKPVIVLKAGKSESGARAASSHTGSLAGSYKIYE-- 263 Query: 272 INAMKEAGICIAPSPARI 289 A K+ GI +A + + Sbjct: 264 -AAFKQTGILVANTIDEM 280 >gi|312114476|ref|YP_004012072.1| CoA-binding protein [Rhodomicrobium vannielii ATCC 17100] gi|311219605|gb|ADP70973.1| CoA-binding domain protein [Rhodomicrobium vannielii ATCC 17100] Length = 911 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 109/283 (38%), Gaps = 20/283 (7%) Query: 17 TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVI 76 G G E + T + I+PK+ + P F +V +V+ Sbjct: 24 QGSIGKHVAENLLKGGFTGDIAFINPKRP------AILGQPCFKSVDALPFTPG--LAVV 75 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD 136 PP I E V IT G+ R+ R+IGPNC G+ P Sbjct: 76 ATPPETVPGVIEELGRKGCRAAVVITAGVSGDLRKRMLEAARPHLLRIIGPNCLGMQVPR 135 Query: 137 SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 + + GSV ++S+SG +T + S EG+G S V IG + D+ Sbjct: 136 LGLDASFAQVLGKAGSVALVSQSGAITTAMLDWASVEGVGFSHVVSIG--DAADVDLGDM 193 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGH 256 L+ + + ++ + E G +A +F+ + R KP++ AG+ + Sbjct: 194 LDYLAGETTSRAVFLYIESVG----DARKFMSAARRCARVKPVIAIKAGRHPEGAK---- 245 Query: 257 AGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVELLG 298 A A +G G+++ A++ AG+ + + E+L Sbjct: 246 AAASHTGALAGSDNVYGAALRRAGVLRVTDLDAMFDA-AEMLA 287 >gi|327401888|ref|YP_004342727.1| CoA-binding domain-containing protein [Archaeoglobus veneficus SNP6] gi|327317396|gb|AEA48012.1| CoA-binding domain protein [Archaeoglobus veneficus SNP6] Length = 659 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 112/295 (37%), Gaps = 24/295 (8%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G T K G AIL + G ++ S + P + ++ + Sbjct: 8 VAVVGATPKEGKV--GNAILKNLKKFRGKVYAVNPSYS---EILGFPCYPSL---LDAPD 59 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRL 124 + +VI +P + + + + + + +V I+ G K K +L Sbjct: 60 VDLAVIAIPAASVLEVVEQCGKKGVKNVVVISAGFEEAGREGAKLEARLVEICRKYGIKL 119 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPNC GI+ + S + G++ LS+SG + + GLG S V +G Sbjct: 120 VGPNCLGIINCHNGLNATFSSSTPKPGNIAFLSQSGAFVLAVIEYFNAVGLGFSKIVSLG 179 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 V D +E+ D T+ I++ E E +F++ K + KP++ + Sbjct: 180 NKAVLDES--DFMEMLADDRHTDVIMLYLE----GIENGRKFMEVARKLSKVKPVIALKS 233 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GKT R I+ G E A +++G+ A S + LL Sbjct: 234 GKTDAGARAASSHTGSIA---GSYEACAAAFRQSGVINASSSEELFD-FARLLAK 284 >gi|196232110|ref|ZP_03130965.1| Succinate--CoA ligase (GDP-forming) [Chthoniobacter flavus Ellin428] gi|196223832|gb|EDY18347.1| Succinate--CoA ligase (GDP-forming) [Chthoniobacter flavus Ellin428] Length = 130 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 73/133 (54%), Positives = 95/133 (71%), Gaps = 4/133 (3%) Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 ++Q + G GQST VGIGGDPV GT +DVL++F D TE+I+M+GEIGG EEEAA + Sbjct: 1 MWQLTTRGYGQSTCVGIGGDPVNGTSHLDVLKMFNDDPETEAIIMIGEIGGDKEEEAAVW 60 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 KD KKPI F+AG TAPPGR MGHAGA++SGGKG A+ KI A+K AGI +A +P Sbjct: 61 AKDHV----KKPIAAFIAGATAPPGRRMGHAGAIVSGGKGTAQGKIEALKAAGIAVAQTP 116 Query: 287 ARIGRSLVELLGS 299 + + +L++ G Sbjct: 117 SVMAETLLKHWGK 129 >gi|326317241|ref|YP_004234913.1| GCN5-like N-acetyltransferase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374077|gb|ADX46346.1| GCN5-related N-acetyltransferase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 897 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 104/250 (41%), Gaps = 12/250 (4%) Query: 47 TYWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI 105 +TG + + T+ A +T A+ +VI +PP A+ + + ++ G+ Sbjct: 43 QRFTGTLQFLDIHTSGTLADLAQTRADLAVIALPPQDTAAALEVAGRIGCRAALVLSHGM 102 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 +++K + L+GPN G+ P G + R+GS+ ++ +SG LT Sbjct: 103 DADGALKLKKIARREGVHLLGPNSLGLQRPHLQLNASAAGPLAREGSLALVCQSGALTAS 162 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + + +G ST V +G P + VL+ D T+SIV+ E GS A + Sbjct: 163 ILDWAHKNAVGFSTVVSLG--PNTDVDIAQVLDFLANDGRTQSIVVYMEGIGS----ARR 216 Query: 226 FLKDEAKRGRKKPIVGFVAGK-TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 F+ KP+V AG+ A H+G ++ G + A++ AG Sbjct: 217 FMSALRSAANAKPVVVLKAGRKPAGNEAAQTHSGTIV----GSDDVFDAALRRAGAVRVR 272 Query: 285 SPARIGRSLV 294 S + + Sbjct: 273 SFVELFSAAK 282 >gi|328954397|ref|YP_004371731.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109] gi|328454721|gb|AEB10550.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109] Length = 890 Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 103/260 (39%), Gaps = 20/260 (7%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P + +PVF ++A + +++ VP G D + E +A++ Sbjct: 40 FPGNIYPINPKHK---EILGIPVFPSIAAVPA--DIDLAIVAVPIKGVADVMRECGQAKV 94 Query: 96 PLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 + I+ G + + A + R +GPNC GIL P S R Sbjct: 95 SGAIIISAGGKEVGEEGEKIEADIHAAAQAYGIRYLGPNCMGILCPRSRLNASFAAHSVR 154 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 GSV +LS+SG + + + +G S V IG + +F ++++ D+ SI Sbjct: 155 PGSVALLSQSGAICSVILDLAESQNIGFSHFVSIGS--MADLDFAEMIDYLGNDDQVRSI 212 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 ++ E +F+ R KPI+ +G++ R ++G Sbjct: 213 LIYMENL----VHHRKFMSAARSVSRVKPIIVVKSGRSEAAARAATSHTGALAGNDAAY- 267 Query: 270 DKINAMKEAGICIAPSPARI 289 A + AGI + A++ Sbjct: 268 --NAAFQRAGIIRVDTIAQL 285 >gi|313901732|ref|ZP_07835160.1| CoA-binding domain protein [Thermaerobacter subterraneus DSM 13965] gi|313467994|gb|EFR63480.1| CoA-binding domain protein [Thermaerobacter subterraneus DSM 13965] Length = 992 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 23/275 (8%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 + G ++P G +P + +V + + +VI VP D + + Sbjct: 305 MNRYQGPVYPVNPKAGVVGS---IPAYRSVLDIP--GPVDLAVIAVPRDAVLDVVDQCGA 359 Query: 93 AEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMP 144 + +V IT G R+ A++ R++GPNC G++ PD Sbjct: 360 KGVRGLVVITAGFAETGAEGRELQERLVAKVRGYGMRMVGPNCLGLINTAPDVRMNASFS 419 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 G V + S+SG L + GLG ST V +G D+++ + DE Sbjct: 420 PVFPPHGRVAMSSQSGALGLAILEYARDLGLGLSTFVSVGNKA--DVSGNDLIQYWEDDE 477 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 T+ I++ E G+ +F + + GRKKPI+ AG+TA + G A ++ Sbjct: 478 DTDLILLYLESFGNP----RRFARLARRVGRKKPILAVKAGRTAAGTKAAGSHTAALAAS 533 Query: 265 KGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 E ++AG+ A + + + LL + Sbjct: 534 DTAVEAL---FRQAGVIRADTLEDMFD-IAALLAN 564 >gi|198411693|ref|XP_002120517.1| PREDICTED: similar to ATP citrate-lyase, partial [Ciona intestinalis] Length = 199 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 16/199 (8%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 + T+ ++ GL + G + V ++P K YW + +P Sbjct: 1 MFTNKTRCIIWGLQSRAVQGMMDFDFVCSRKTPSVAAMVYPFSGDHKQKFYWGHKEILIP 60 Query: 58 VFTTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAE-IPLIVCITEGIPVLDMVRVKA 115 V+ +++A + A+ + + A ++ I++++ + I I I EGIP ++ Sbjct: 61 VYKNMSDAMHKHSDADVMISFASLRSAEESTIDTLQYQQIRTIAIIAEGIPEATTKKLNK 120 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 + + +IGP G + P KIG I+ ++R GSV +SRSG ++ E Sbjct: 121 LAREKNVSIIGPATVGGIKPGCFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 180 Query: 168 FQTSQEGLGQSTAVGIGGD 186 S+ G V IGGD Sbjct: 181 NIISRTTNGVCEGVAIGGD 199 >gi|317121739|ref|YP_004101742.1| CoA-binding protein [Thermaerobacter marianensis DSM 12885] gi|315591719|gb|ADU51015.1| CoA-binding domain protein [Thermaerobacter marianensis DSM 12885] Length = 980 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 62/275 (22%), Positives = 110/275 (40%), Gaps = 23/275 (8%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 + G ++P G +P + +V + + +VI VP D + + Sbjct: 303 MNRFAGPVYPVNPKADVVGS---IPAYPSVLDIP--GPVDLAVIAVPRDAVLDVVDQCGA 357 Query: 93 AEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMP 144 + +V IT G R+ A++ R++GPNC G++ PD Sbjct: 358 KGVRGLVVITAGFAETGAEGRALQERLVAKVRGYGMRMVGPNCLGLINTAPDVRMNASFS 417 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 G V + S+SG L + GLG ST V +G D+++ + DE Sbjct: 418 PVFPPHGRVAMSSQSGALGLAILEYARDLGLGLSTFVSVGNKA--DVSGNDLIQYWEEDE 475 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 T+ I++ E G+ +F + + GR+KPI+ AG+TA + G A ++ Sbjct: 476 DTDLILLYLESFGNP----RRFARLARRVGRRKPILAVKAGRTAAGTKAAGSHTAALAAS 531 Query: 265 KGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 E ++AG+ A + + + LL + Sbjct: 532 DTAVEAL---FRQAGVIRADTLEDMFD-IAALLAN 562 >gi|260893545|ref|YP_003239642.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Ammonifex degensii KC4] gi|260865686|gb|ACX52792.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Ammonifex degensii KC4] Length = 699 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 101/260 (38%), Gaps = 22/260 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 I+P+ G + F V+ R A + +V+ VP D + EA + + Sbjct: 42 PINPR------AGEIEGLKAFPAVSAL-GRGAVDLAVVAVPAPFVLDVARDCGEAGVKAL 94 Query: 99 VCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 V I+ G + A + RL+GPNC G++ + KG Sbjct: 95 VVISAGFKETGKEGLEREKELVAICRQYGMRLLGPNCVGVMDTHTPLNASFAAGFPHKGE 154 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 + +S+SG + + + +EG+G S V +G + D++E D T+ I+ Sbjct: 155 IAFISQSGAMLVAILDWSMREGIGFSQFVSMGNKA--DLDETDLIEAAANDPHTKVILCY 212 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 E +E +FL+ + R+KP+V +G + + ++G + Sbjct: 213 LEDI----KEGQRFLEVAERVTREKPVVVLKSGVSEAGAKAASSHTGALAGSNIAYD--- 265 Query: 273 NAMKEAGICIAPSPARIGRS 292 A ++AG+ S + Sbjct: 266 AAFRQAGVIRVQSMRELFDL 285 >gi|209879069|ref|XP_002140975.1| acetyl-CoA synthetase [Cryptosporidium muris RN66] gi|209556581|gb|EEA06626.1| acetyl-CoA synthetase, putative [Cryptosporidium muris RN66] Length = 966 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 69/311 (22%), Positives = 120/311 (38%), Gaps = 44/311 (14%) Query: 1 MSILVDKNTKVLVQGLTGKAGTF-----------HTEQAILYCQTQV-VGGIHPKKG--- 45 M+ L + T LV G T + + H E + V ++P + Sbjct: 21 MNCLFEPRTIALV-GATERKFSVGRALFLNMIQQHLEDVVENSHFNYTVYPVNPTRKECF 79 Query: 46 STYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI 105 +N+PV + VI P + E+ + ++P I+ I+ G Sbjct: 80 GKKCYDSLLNIPV-----------VIDLVVIVTPAKTVLGIVQEAAKKKVPAILIISSGF 128 Query: 106 PV---LDMVRVKARL---EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRS 159 + R KA L +K+ R++GPNC G + + +G+ LS+S Sbjct: 129 KESGPEGIDREKAILDIAKKNGIRILGPNCLGFMNVAYNLNATFINCMACRGTTAFLSQS 188 Query: 160 GTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSA 219 G L + + +G S V +G + ++ D+++ D T+ I+M E G Sbjct: 189 GALCAAVLDWAVKVRIGFSAFVSVGS--MSDIDWGDLVDYLGHDPNTKIILMYIESIG-- 244 Query: 220 EEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK-GGAEDKINAMKEA 278 A +FL + KPI+ AGK+ R A A +G G + I+AMK Sbjct: 245 --NARKFLSAAKEIAISKPIIVIKAGKS----RAAYKAAASHTGSLVGNYDAFISAMKRI 298 Query: 279 GICIAPSPARI 289 G+ + + + Sbjct: 299 GVLVVDTIEEL 309 >gi|294496302|ref|YP_003542795.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanohalophilus mahii DSM 5219] gi|292667301|gb|ADE37150.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanohalophilus mahii DSM 5219] Length = 697 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 110/295 (37%), Gaps = 22/295 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 +S L + + V V G + K G + G I+P G Sbjct: 2 LSSLFNPKS-VAVIGASNKKG-KVGNAVLSNLIKDFGGNIYPVNPRNEEIEGLECYASIN 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ 114 V++ + +V+ +P + E A + +V I+ G + K Sbjct: 60 DVSD-----DVDLAVVVIPAKIVPSTLEECGRAGVKYVVVISAGFKEAGVEGAKLERSAL 114 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 K R++GPNC GI+ P + S+ +G++ ++S+SG + + G Sbjct: 115 EICRKHDMRMVGPNCLGIMDPVAGLNASFAASMAYEGNIAMMSQSGAICTSTLDWAEANG 174 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G S V +G G L F D +T I E + +QF++ Sbjct: 175 MGFSKFVSLGNKADLGEN--QFLAEFRDDPSTSVIAAYLE----GIKNGSQFIEIARDVS 228 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 RKKP+V +G+TA R + ++G + A +AG+ A + + Sbjct: 229 RKKPVVLVKSGRTAAGSRAVSSHTGTLAGSD---QAYNAAFDKAGVVRADTLEDM 280 >gi|254173847|ref|ZP_04880518.1| AcdA-3 acetate--coA ligase (ADP-forming) , alpha chain [Thermococcus sp. AM4] gi|214032096|gb|EEB72927.1| AcdA-3 acetate--coA ligase (ADP-forming) , alpha chain [Thermococcus sp. AM4] Length = 461 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 108/258 (41%), Gaps = 21/258 (8%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPL 97 G ++P G V + V + + + ++I VP +I++ E + Sbjct: 41 GKVYPVNVKDEVVQG---VKAYKNVKDIPDE--VDLAIIVVPKRFVKQSIVDCGEKGVKG 95 Query: 98 IVCITEGIPVLDMVR------VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 V IT G + + RLIGPNC G++ + +KG Sbjct: 96 AVIITAGFGETGEEGKKEERELVEIAHRYGMRLIGPNCVGVMNTHNDMNATFIM-DAKKG 154 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 S+ +S+SG L V++T +EG+G S + +G + +F +++E E ++I + Sbjct: 155 SIAFVSQSGALGAGIVYKTVKEGIGFSKFISVGN--MADLDFAELMEYLADTEEDKAIAL 212 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDK 271 E ++ +F++ K RKKP++ AGK+ R ++G E Sbjct: 213 YIE----GIKDGRKFIEVAKKATRKKPVIALKAGKSESGARAASSHTGSLAGSWKIYE-- 266 Query: 272 INAMKEAGICIAPSPARI 289 A K++G+ IA + + Sbjct: 267 -AAFKQSGVLIAETIDDM 283 >gi|320100340|ref|YP_004175932.1| CoA-binding domain-containing protein [Desulfurococcus mucosus DSM 2162] gi|319752692|gb|ADV64450.1| CoA-binding domain protein [Desulfurococcus mucosus DSM 2162] Length = 466 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 71/308 (23%), Positives = 121/308 (39%), Gaps = 25/308 (8%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 ++ + ++ V V G T + G + + G ++P + + + Sbjct: 4 ITRFFNPSS-VAVIGATPREG-KVGRVILENFTKRYRGRVYPVNPGY---DEILGLKCYR 58 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-----PVLDMVR--V 113 ++ + E + +VI +P G + + E E + I+ G P + + V Sbjct: 59 SIRDLPEAP--DLAVIAIPAPGVPEVLRELGEKGCKAAIIISGGFRETGTPEGERLENEV 116 Query: 114 KARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 K K R+IGPNC GI D+ + KG V +S+SG + Sbjct: 117 KEIALKYGIRIIGPNCIGIYDSWSGVDTFFLPEEKMKRPPKGYVAFISQSGAFASALMDW 176 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + +G S AV G + +D+LE +DE T I++ E G + FL+ Sbjct: 177 MAYNNIGVSRAVSYGNK--VDVDDVDILEYLASDEKTRVILIYLE--GLKDGRGRAFLEA 232 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 K KP++ F AGKT GR A + + G +A K+AGI S + Sbjct: 233 ARKVSTVKPVLIFKAGKT---GRGSLAAASHTAALAGDYSVYKSAFKQAGIVEVESFDEM 289 Query: 290 GRSLVELL 297 ++ LL Sbjct: 290 MDAVRILL 297 >gi|14520859|ref|NP_126334.1| hypothetical protein PAB1937 [Pyrococcus abyssi GE5] gi|5458076|emb|CAB49565.1| acdA-2 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain [Pyrococcus abyssi GE5] Length = 460 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 66/313 (21%), Positives = 126/313 (40%), Gaps = 30/313 (9%) Query: 1 MSI--LVDKNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN 55 MS+ L + + + V G + GK G + I Y + ++ K G +G Sbjct: 1 MSLEALFNPKS-IAVIGASSKPGKIGYAIMKNLIEYGYEGKIYPVNIKGGEMEISGRKFK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 V+ ++ E + + ++I VP + E + + ++ I+ G L K Sbjct: 60 --VYKSILEVPDE--VDMAIIVVPAKFVPQVVEECGQKGVKVVPIISSGFGELGEEGKKV 115 Query: 116 R------LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 K R++GPN G++ + G + G + ++S+SG L + Sbjct: 116 EQQLVETARKYGMRILGPNIFGVVYTPAKLNGTFGPTDVLPGPLALISQSGALGIALMGW 175 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 T E +G S V +G + D+LE F DE T +I++ E ++ +F++ Sbjct: 176 TILEKIGLSAVVSVGNKA--DIDDADLLEFFKDDENTRAILIYME----GVKDGRRFMEV 229 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + +KKPI+ AG++ + ++G A K++G+ A + I Sbjct: 230 AKEVSKKKPIIVIKAGRSERGAKAAASHTGSLAGSDTIYS---AAFKQSGVLRALT---I 283 Query: 290 GRSL--VELLGSL 300 G + L +L Sbjct: 284 GEAFDWARALSNL 296 >gi|320354216|ref|YP_004195555.1| CoA-binding domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320122718|gb|ADW18264.1| CoA-binding domain protein [Desulfobulbus propionicus DSM 2032] Length = 889 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 67/298 (22%), Positives = 122/298 (40%), Gaps = 27/298 (9%) Query: 1 MSILVDKNTKVLVQGLTGK---AGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVP 57 M D + + V G K G+ + I V I+P + Sbjct: 1 MEQFFDPQS-IAVIGANDKPNAIGSALMDNIIQGGFRGTVIPINP------HHETVRGLK 53 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------ 111 + T+ E A ++I P + A + + + + A ++ I+ G L Sbjct: 54 AYATITEV--EPAPEMAIIATPIATAPEIVRQCVRAGTQGVIIISAGGKELGEEGALIEE 111 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 +++ E S R+IGPNC G++ P+ G + KGS+ ++S+SG + + + + Sbjct: 112 QIQGAAEGSGMRIIGPNCMGVIRPNKNLNATFAGGMPAKGSLAVISQSGAICAAILDRAA 171 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +E +G S V IG + +F D+++ D + ++I++ E + +F+ Sbjct: 172 EEHMGFSHFVSIGS--MLDVDFGDMIDYLGNDGSVKAILLYMENLTNP----RKFMSAAR 225 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 R KPI+ AGK+ R ++G + A K AGI PS AR+ Sbjct: 226 SVSRIKPIIVLKAGKSQAGARAASTHIGAMAGEDAVYD---AAFKRAGIVRVPSLARL 280 >gi|261403430|ref|YP_003247654.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanocaldococcus vulcanius M7] gi|261370423|gb|ACX73172.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanocaldococcus vulcanius M7] Length = 700 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 112/288 (38%), Gaps = 21/288 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G T + G AI+ G ++P + + + +V + ++ Sbjct: 12 VAVIGATNREGKV--GYAIMKNLENFNGRVYPVNPKY---DEVLGLKCYKSVLDIEDE-- 64 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----RVKARLEKSSSRLIG 126 + ++I VP + E + + V I+ G + ++K ++ + R+IG Sbjct: 65 IDLAIIVVPNVVVPQVLEECGKKGVKSAVIISAGFSEVGNYELEEKIKEIAKRYNIRIIG 124 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNC GI+ KG V I+S+SG + + +G S V IG Sbjct: 125 PNCLGIMNTHINLNATFAKVFPPKGGVSIISQSGAVLNAILDIAPLLNIGFSKVVSIGNK 184 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + D++E FL DE T+ +V+ E +FL K +KKPI+ +G+ Sbjct: 185 --VDVQESDLMEYFLNDEDTKMVVLYIEGLKDK-----RFLNVAKKLSKKKPIIALKSGR 237 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 T + ++G E KE+GI A + + + Sbjct: 238 TDVGKKAAKSHTGSLAGEDEIYEAV---FKESGIVRAYTFEELVDLIH 282 >gi|18976904|ref|NP_578261.1| hypothetical protein PF0532 [Pyrococcus furiosus DSM 3638] gi|18892519|gb|AAL80656.1| hypothetical protein PF0532 [Pyrococcus furiosus DSM 3638] Length = 457 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 109/259 (42%), Gaps = 21/259 (8%) Query: 37 VGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIP 96 G ++P V + +V E + ++I VP +IE E + Sbjct: 36 GGKVYPVN---VREEEVQGVKAYKSVKEIP--GEVDLAIIVVPKKFVKQTLIECGEKGVK 90 Query: 97 LIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 +V IT G + + K R+IGPNC GI+ + ++ +K Sbjct: 91 GVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIGPNCVGIMNTHANLNATF-ITVAKK 149 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G+V +S+SG L V++T +E +G S + +G + +F D++E + ++I Sbjct: 150 GNVAFISQSGALGAGIVYKTIKEDIGFSKFISVGN--MADLDFADLMEYLADTQEDKAIA 207 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + E ++ +F++ K +KKP++ AGK+ R ++G E Sbjct: 208 LYIE----GIKDGRRFIEVAKKVTKKKPVIALKAGKSESGSRAAASHTGSLAGSWKIYE- 262 Query: 271 KINAMKEAGICIAPSPARI 289 A K++G+ +A + + Sbjct: 263 --AAFKQSGVLVANTIDEM 279 >gi|302768983|ref|XP_002967911.1| hypothetical protein SELMODRAFT_408824 [Selaginella moellendorffii] gi|300164649|gb|EFJ31258.1| hypothetical protein SELMODRAFT_408824 [Selaginella moellendorffii] Length = 150 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 67/111 (60%), Positives = 82/111 (73%), Gaps = 5/111 (4%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+VL QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF + Sbjct: 33 AVFVDKNTRVLCQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNS 87 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR 112 V EAK T ANA+VIYVPP A AI+E++EAE+ L+VCITEGIP DM Sbjct: 88 VHEAKAETKANATVIYVPPKFAAAAIMEAVEAELDLVVCITEGIPQHDMSC 138 >gi|312137221|ref|YP_004004558.1| acetyl coenzyme a synthetase (ADP forming), alpha domain protein [Methanothermus fervidus DSM 2088] gi|311224940|gb|ADP77796.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanothermus fervidus DSM 2088] Length = 694 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 64/272 (23%), Positives = 107/272 (39%), Gaps = 19/272 (6%) Query: 27 QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA 86 +I+ G ++P + + +++V + ++ + +VI VP Sbjct: 26 YSIIRNLKNFKGNVYPVNPKYK---NLLGMKCYSSVLDVEDE--IDLAVIAVPNIIVPKV 80 Query: 87 IIESIEAEIPLIVCITEGIPVLDMV----RVKARLEKSSSRLIGPNCPGILTPDSCKIGI 142 + E E I V IT G + +++ + R+IGPNC GI+ Sbjct: 81 LEECGEKNIRGAVIITAGFSEVGNYELENKIREIAKNYGIRIIGPNCLGIMNTHLDLNAT 140 Query: 143 MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA 202 KG V I+S+SG + + +G S V IG + D+LE F+ Sbjct: 141 FASIFPPKGKVSIVSQSGAILDAILDIAPLLNIGFSKVVSIGNK--VDIQESDLLEYFIK 198 Query: 203 DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 D+ TE +V+ E +FLK K RKKPI+ +GKT + + ++ Sbjct: 199 DDDTEIVVLYIEGLKDK-----KFLKSAKKLSRKKPIIALKSGKTEIGKKAVKSHTGALA 253 Query: 263 GGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 G E KEAGI A + + + Sbjct: 254 GEDSIYEAV---FKEAGIIRAYTFEELVDLIH 282 >gi|119897952|ref|YP_933165.1| hypothetical protein azo1661 [Azoarcus sp. BH72] gi|119670365|emb|CAL94278.1| conserved hypothetical protein [Azoarcus sp. BH72] Length = 895 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 53/236 (22%), Positives = 94/236 (39%), Gaps = 19/236 (8%) Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD---- 109 + +P + +V + + +VI V + A + ++ ++ G Sbjct: 56 LGIPCYKSVEDVP--HRLDLAVIAVRAEKVAAIVDSCGRAGVKAVIVLSSGFSETGPRGA 113 Query: 110 --MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 V + RL+GPNC GI+ P+ + KGS+G++S+SG L + Sbjct: 114 LYERHVIEAARRHKIRLLGPNCLGIMRPELGLNATFAHASAVKGSIGLISQSGALCAAIL 173 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 +G S V +G +F ++LE ++D TESI + E +A +F+ Sbjct: 174 DWAKPNNVGFSAVVSLGTS--SDIDFGEILEFMISDPRTESIFLYVE----GIRDARRFM 227 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRT-MGHAGAVISGGKGGAEDKINAMKEAGICI 282 R KP++ G+ R + H GA I G A++ AG+ Sbjct: 228 SALRGAARVKPVLLVKVGRHPDVSRAILSHTGAPI----GDDAVFDAALRRAGVIR 279 >gi|18977912|ref|NP_579269.1| ADP forming acetyl coenzyme A synthetase [Pyrococcus furiosus DSM 3638] gi|5419966|emb|CAB46516.1| acetyl-CoA synthetase [Pyrococcus furiosus] gi|18893678|gb|AAL81664.1| acetyl coenzyme A synthetase (ADP forming) [Pyrococcus furiosus DSM 3638] Length = 462 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 68/313 (21%), Positives = 124/313 (39%), Gaps = 30/313 (9%) Query: 1 MSI--LVDKNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN 55 MS+ L + + V V G + GK G + I Y + ++ K G G Sbjct: 1 MSLEALFNPKS-VAVIGASAKPGKIGYAIMKNLIEYGYEGKIYPVNIKGGEIEINGRKFK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 V+ +V E + + +VI VP + E + + ++ I+ G L K Sbjct: 60 --VYKSVLEIPDE--VDMAVIVVPAKFVPQVLEECGQKGVKVVPIISSGFGELGEEGKKV 115 Query: 116 R------LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 K R++GPN G++ + + G + ++S+SG L + Sbjct: 116 EQQLVETARKYGMRILGPNIFGVVYTPAKLNATFGPTDVLPGPLALISQSGALGIALMGW 175 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 T E +G S V +G + D+LE F DE T +I++ E ++ +F++ Sbjct: 176 TILEKIGLSAVVSVGNKA--DIDDADLLEFFKDDENTRAILIYME----GVKDGRRFMEV 229 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + +KKPI+ AG++ + ++G A K++G+ A + I Sbjct: 230 AKEVSKKKPIIVIKAGRSERGAKAAASHTGSLAGSDKVYS---AAFKQSGVLRAYT---I 283 Query: 290 GRSL--VELLGSL 300 G + L +L Sbjct: 284 GEAFDWARALSNL 296 >gi|56479337|ref|YP_160926.1| acyl-CoA synthetase (ADP forming) [Aromatoleum aromaticum EbN1] gi|56315380|emb|CAI10025.1| Acyl-CoA synthetase (ADP forming) [Aromatoleum aromaticum EbN1] Length = 895 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 95/250 (38%), Gaps = 23/250 (9%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK + VP + +V + + VI V + A + + Sbjct: 47 AVNPK------HESVLGVPCYKSVEDVP--HRLDLVVIAVRADRVLAIVEGCGRAGVKAV 98 Query: 99 VCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 + ++ G V + RL+GPNC GI+ P KG+ Sbjct: 99 IIMSTGFSETGPRGALLERHVVEAARRYRIRLLGPNCLGIMRPVLGLNATFAHVSAIKGT 158 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 +G++S+SG L + +G S V +G +F +VLE ++D TESI+M Sbjct: 159 IGLISQSGALCTSILDWAEPNNIGFSAVVSLGSS--SDIDFGEVLEYMISDPRTESIIMY 216 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 E +A +F+ R KP++ G+ R + +SG + Sbjct: 217 VE----GIRDARRFMSALRGAARVKPVLLIKVGRHPDVSRAIRSHSGSMSGNDAVFD--- 269 Query: 273 NAMKEAGICI 282 A++ AG+ Sbjct: 270 AALRRAGVIR 279 >gi|240102483|ref|YP_002958792.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA) [Thermococcus gammatolerans EJ3] gi|239910037|gb|ACS32928.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA) [Thermococcus gammatolerans EJ3] Length = 458 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 107/258 (41%), Gaps = 21/258 (8%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPL 97 G ++P G V + V + + + ++I VP AII+ E + Sbjct: 38 GRVYPVNVKDEVVQG---VKAYKNVKDIPDE--VDLAIIVVPKRFVKQAIIDCGEKGVKG 92 Query: 98 IVCITEGIPVLDMVR------VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 V IT G + K RLIGPNC G++ + +KG Sbjct: 93 AVIITAGFGETGEEGKKEERELVEIAHKYGMRLIGPNCVGVMNTHNDMNATFIM-DAKKG 151 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 S+ +S+SG L V++T +EG+G S V +G + +F +++E ++I + Sbjct: 152 SIAFVSQSGALGAGIVYKTVKEGIGFSKFVSVGN--MADLDFAELMEYLAETGEDKAIAL 209 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDK 271 E ++ +F++ K +KKP++ AGK+ R ++G E Sbjct: 210 YIE----GLKDGRKFIEVAKKVTKKKPVIALKAGKSESGARAASSHTGSLAGSWKIYE-- 263 Query: 272 INAMKEAGICIAPSPARI 289 A K++G+ IA + + Sbjct: 264 -AAFKQSGVLIAETIDDM 280 >gi|302761178|ref|XP_002964011.1| hypothetical protein SELMODRAFT_405593 [Selaginella moellendorffii] gi|300167740|gb|EFJ34344.1| hypothetical protein SELMODRAFT_405593 [Selaginella moellendorffii] Length = 150 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 67/111 (60%), Positives = 82/111 (73%), Gaps = 5/111 (4%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ VDKNT+VL QG+TGK GTFHTEQAI Y T++VGG+ PKKG T G +PVF + Sbjct: 33 AVFVDKNTRVLCQGITGKNGTFHTEQAIEY-GTKMVGGVTPKKGGTEHLG----LPVFNS 87 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR 112 V EAK T ANA+VIYVPP A AI+E++EAE+ L+VCITEGIP DM Sbjct: 88 VHEAKAETKANATVIYVPPKFAAAAIMEAVEAELDLVVCITEGIPQHDMSC 138 >gi|295695778|ref|YP_003589016.1| CoA-binding domain protein [Bacillus tusciae DSM 2912] gi|295411380|gb|ADG05872.1| CoA-binding domain protein [Bacillus tusciae DSM 2912] Length = 902 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 60/265 (22%), Positives = 104/265 (39%), Gaps = 22/265 (8%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 + G ++P S G VP + +V+ E+ + +VI VP + E Sbjct: 229 MNRFEGPVYPVNPSARVVGS---VPAYPSVSALPEK--VDLAVIAVPRDAVIPTVEECGR 283 Query: 93 AEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGIL--TPDSCKIGIMP 144 A + +V IT G ++ R++GPNC G+L P Sbjct: 284 AGVRAVVVITAGFAETGAEGRAMQAQLIETARGYGMRVVGPNCLGLLNAYPKIRLNASFS 343 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 G V + S+SG L + ++ GLG S V +G D+LE + D Sbjct: 344 PIFPPYGPVSMSSQSGALGIAILQYAAEMGLGMSNFVSVGNKA--DVSGNDLLEYWEEDP 401 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 T I++ E G+ +F + + GRKKP++ +G+T R G A ++ Sbjct: 402 NTGLILLYLESFGNP----RRFSRIARRVGRKKPVLVVKSGRTEVGHRAAGSHTAALAAN 457 Query: 265 KGGAEDKINAMKEAGICIAPSPARI 289 + + ++AG+ A + + Sbjct: 458 ETMVDAL---FEQAGVIRADTLEEM 479 >gi|27381179|ref|NP_772708.1| hypothetical protein bll6068 [Bradyrhizobium japonicum USDA 110] gi|27354346|dbj|BAC51333.1| bll6068 [Bradyrhizobium japonicum USDA 110] Length = 897 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 15/234 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 VI P I ++ + +T G+ P V A K RLIGP Sbjct: 70 PELVVITAPAREVPGIIDQAGRRGSAGALIVTAGLGHGPGSLQEAVIAAARKYGMRLIGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 NC GI+ P + G++ ++S+SG + V +Q G+G S V IG Sbjct: 130 NCLGIMMPGVSLNASFAAHMPGAGNLALISQSGAIAAGMVDWAAQRGVGFSGIVSIGDQ- 188 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + D+L+ F D T +I++ E A ++A +F+ R KP+V +G+ Sbjct: 189 -IDVDIADLLDYFAMDHKTRAILLYIE----AIKDARKFMSAARAAARVKPVVVVKSGRM 243 Query: 248 APPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVELLGSL 300 A + A A +G GA+ A + AGI + E LG + Sbjct: 244 AQGAK----AAATHTGALAGADAVYDAAFRRAGILRVSDLRELFDC-AETLGRV 292 >gi|295676331|ref|YP_003604855.1| CoA-binding domain protein [Burkholderia sp. CCGE1002] gi|295436174|gb|ADG15344.1| CoA-binding domain protein [Burkholderia sp. CCGE1002] Length = 899 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 73/298 (24%), Positives = 116/298 (38%), Gaps = 20/298 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 ++ + + +V V + G + T + + VV G P KG ++PV+ Sbjct: 18 LAHIATREDRVCVLNILGGESSEVTPVSHAFSGANVVFGTAPGKGGQVLATPAGDIPVYN 77 Query: 61 TVAEAKER-TAANASVIYVPPSGAGDAIIESI--EAEIPLIVCITEGIPVLDMVRVKARL 117 V E E N V+Y+PPS A D + E I ++ I ITE I V D ++A Sbjct: 78 NVREGLEAGHRFNCGVVYLPPSAARDGVAELIRVNPDLRKIFIITEKISVHDAREIRAMG 137 Query: 118 EKSSSRLIGPNCPGI------LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 +++ + G N G+ + G PG+ R+GS+ I S SG + Sbjct: 138 QQAGIDIFGANGLGVADSWQRVRIGGALGGDDPGATLRQGSIAIFSNSGGFSTTIAQYLR 197 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 G G ST V G D + D +++ V+ E GG E +AA Sbjct: 198 MSGWGTSTVVSSGKDVYIHYAAPEFAFALANDARSKAAVLYCEPGGYYEADAA------- 250 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGICIAPSPAR 288 KP+V V G+ ++GG A K M++ G+ +P Sbjct: 251 ---FTKPVVACVVGRWKSRLTRAVGHAGAMAGGADDARAKERWFMEKFGVERLFTPDD 305 >gi|332157746|ref|YP_004423025.1| ADP forming acetyl coenzyme A synthetase [Pyrococcus sp. NA2] gi|331033209|gb|AEC51021.1| ADP forming acetyl coenzyme A synthetase [Pyrococcus sp. NA2] Length = 461 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 116/291 (39%), Gaps = 24/291 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + I Y + ++ K G +G V+ ++ E + + +VI Sbjct: 22 GKIGYAIMKNLIEYGYKGKIYPVNIKGGEMEISGRKFK--VYKSILEIPDE--VDMAVIV 77 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR------LEKSSSRLIGPNCPG 131 VP + E + + ++ I+ G L K +K R++GPN G Sbjct: 78 VPAKFVPGVLEECGKKGVKVVPIISSGFGELGEEGKKVEQQLVETAKKYGMRILGPNIFG 137 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ + G + ++S+SG L + T E +G S V +G Sbjct: 138 VVYTPANLNATFGPKDVLPGPLALISQSGALGIALMGWTILEKIGLSAVVSVGNKA--DI 195 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 + D+LE F DE T++I++ E ++ +F++ + +KKPI+ AG++ Sbjct: 196 DDADLLEFFKDDENTKAILIYME----GVKDGRRFMEVAKEVSKKKPIIVIKAGRSERGA 251 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL--VELLGSL 300 + ++G A K++G+ A + IG + L +L Sbjct: 252 KAAASHTGSLAGSDTIYS---AAFKQSGVLRALT---IGEAFDWARALSNL 296 >gi|219852563|ref|YP_002466995.1| CoA-binding domain protein [Methanosphaerula palustris E1-9c] gi|219546822|gb|ACL17272.1| CoA-binding domain protein [Methanosphaerula palustris E1-9c] Length = 680 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 61/295 (20%), Positives = 111/295 (37%), Gaps = 23/295 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G T A+++ G ++P G P T + Sbjct: 242 VAVIGA--SQDTSKMGYAVMHNLLHFPGQLYPVNNKRSEIQGLKAYPTITAIPN-----P 294 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRL 124 + +VI VP + I E + +P+ V IT G + + RV + R+ Sbjct: 295 VDMAVITVPANHVPQVIEECGQKGVPMAVIITAGFKEMGDMGKALEDRVVEIARRYGIRI 354 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPNC G++ P G+V +S+SG + V + +G S + +G Sbjct: 355 IGPNCLGLIVPPRGLDTTYVHESPNPGTVAFISQSGAIINTVVDWSLSHDIGFSAVISVG 414 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 F+D L+ D T+++++ E + F+K ++ + KP+V + Sbjct: 415 NQA--DLNFLDYLKFVQHDPKTKAVILYIE----EITDGKAFMKVVSEVTKYKPVVAIKS 468 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G + + +S G E + A ++AG+ + + E+L S Sbjct: 469 GSSQRGQKAASSHTGSLS---GSYEVYMEAFRQAGVIPVHTLTG-AFQVAEMLAS 519 >gi|319793646|ref|YP_004155286.1| gcn5-related N-acetyltransferase [Variovorax paradoxus EPS] gi|315596109|gb|ADU37175.1| GCN5-related N-acetyltransferase [Variovorax paradoxus EPS] Length = 899 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 93/228 (40%), Gaps = 11/228 (4%) Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGP 127 +T A+ ++I + P A+ + V I+ GI + + + L+GP Sbjct: 64 QTHADLALIALAPQDVAAALEIAGRIGCKAAVVISNGIASEQAAQWRKIARREGVHLLGP 123 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 N G P + G + + G + ++S+SG LT + Q G+G S+ V +G P Sbjct: 124 NSLGFQRPLLHLNASVAGPLAKAGPLALVSQSGALTASMLDWARQNGVGFSSVVSLG--P 181 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK- 246 + VL+ D+AT SI++ E +A +F+ KP+V AG+ Sbjct: 182 HTSVDIPQVLDFLANDQATHSIIVYLEGIS----DARRFMSALRSASHAKPVVVLKAGRK 237 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 A H+ +++ G + A++ AG S + + Sbjct: 238 PAGNAAAQTHSASIV----GSDDVFDAALRRAGAVRVRSFVELFSAAK 281 >gi|307545088|ref|YP_003897567.1| hypothetical protein HELO_2498 [Halomonas elongata DSM 2581] gi|307217112|emb|CBV42382.1| K09181 hypothetical protein [Halomonas elongata DSM 2581] Length = 892 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 66/307 (21%), Positives = 118/307 (38%), Gaps = 33/307 (10%) Query: 1 MSI-----LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGG---IHPKKGSTYWTGG 52 MSI L +T L+ G + + G+ A G ++P++ + T Sbjct: 1 MSIRNLDALFSPSTIALI-GASNRPGSVGAVLARNLYGAGFAGPILTVNPRERAIRSTLN 59 Query: 53 NVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR 112 + T++E + ++I P + + I E V I+ G + Sbjct: 60 ------YQTISELPLAP--DLAIIATPAATVPELIHELGTRGCRAAVVISAGFGEGENED 111 Query: 113 ----VKARLEKSS---SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 KA LE + R++GPNC GIL+P KG + +++SG + Sbjct: 112 GDALKKAMLEAAKPFLMRIVGPNCLGILSPHVGINASFAHLTPAKGDIAFVTQSGAVATS 171 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + S G+G S +G + +F D+L+ D T SI++ E A EA + Sbjct: 172 ILDWASARGIGFSHVASLGS--MSDVDFGDMLDYLALDPKTHSILLYAE----AVTEARK 225 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 FL R KP+V AG++ + ++G + A + AG+ + Sbjct: 226 FLSAARMASRNKPVVVVKAGRSTAGAKAALSHTGALAGADAVYD---AAFRRAGMLRVRT 282 Query: 286 PARIGRS 292 + ++ Sbjct: 283 LDELFQA 289 >gi|126180267|ref|YP_001048232.1| CoA-binding domain-containing protein [Methanoculleus marisnigri JR1] gi|125863061|gb|ABN58250.1| CoA-binding domain protein [Methanoculleus marisnigri JR1] Length = 707 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 106/279 (37%), Gaps = 21/279 (7%) Query: 27 QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA 86 ++L G ++P S G P +V + + +V+ VP + Sbjct: 281 YSVLRNLLSFPGNLYPVNPSRTELFGRKTYP---SVTGIPD--PVDWAVVAVPARIVPEV 335 Query: 87 IIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCKI 140 + E + I L V +T G + A + R+IGPNC GI+ P Sbjct: 336 MEECGKKGIRLAVIVTAGFREIGGEGTVLEEKVTAIARRHGIRIIGPNCLGIMMPHMGIN 395 Query: 141 GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 R G V +S+SG + V + E G ST + +G G E L Sbjct: 396 ATFDPVSPRPGDVAFISQSGAIITTVVDWSLPEEFGFSTVISVGNQADLGFEH--FLRFA 453 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAV 260 DE T S+ + E ++ F++ + ++KP+V +G + Sbjct: 454 EQDEKTRSVTLYVE----EIQDGRGFMQIVGEVAKRKPVVAVKSGSSRKGRAAASSHTGS 509 Query: 261 ISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++ G + + A ++AG+ +A S +L ELL S Sbjct: 510 LA---GSYDVYVAAFRQAGVIVARSLRD-AFNLAELLAS 544 >gi|183180812|gb|ACC44673.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180820|gb|ACC44677.1| Cre-D1005.1 [Caenorhabditis remanei] Length = 238 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 6/173 (3%) Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 I I+ ++R GSV +SRSG ++ E SQ G + IGGD G Sbjct: 1 KIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELNNIISQNTNGVYEGIAIGGDRYPG 60 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP- 249 + + D + + D+ + IV++GE+GG E + + LK ++ KP+V + G A Sbjct: 61 STYTDHVIRYQNDDRVKMIVLLGEVGGVEEYKIVELLK---QKKVTKPLVAWCIGTCADH 117 Query: 250 --PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GHAGA + A K A++ +G + S +G + + L Sbjct: 118 ITSEVQFGHAGASANALGETAACKNAALRASGALVPESFDDLGNKIRQTYDEL 170 >gi|241764821|ref|ZP_04762827.1| GCN5-related N-acetyltransferase [Acidovorax delafieldii 2AN] gi|241365653|gb|EER60373.1| GCN5-related N-acetyltransferase [Acidovorax delafieldii 2AN] Length = 896 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 100/263 (38%), Gaps = 12/263 (4%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIE 92 T +HP + + G V T+ A + ++ ++I +PP+ A+ + Sbjct: 29 TSYAQALHPALRAQRFAGTLQFVDTHTSGTLADLAQRRSDLAIIALPPAEVPAALEVAGR 88 Query: 93 AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 + ++ G+ +K + L+GPN G P G + R GS Sbjct: 89 IGCRAALVMSSGMDADQAANLKKIARREGVYLLGPNSLGFQRPHLQLNASAAGPLARDGS 148 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 + ++ +SG LT + S +G S V +G P + VL+ D T+SIV+ Sbjct: 149 LALVCQSGALTASILDWASNNAVGFSAVVSLG--PNTDVDIAQVLDFLAHDARTQSIVVY 206 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK-TAPPGRTMGHAGAVISGGKGGAEDK 271 E A +F+ KP+V AG+ A H+G ++ G + Sbjct: 207 MEGIS----NARRFMSALRSAANAKPVVVLKAGRKPAGNEAAQTHSGTIV----GSDDVF 258 Query: 272 INAMKEAGICIAPSPARIGRSLV 294 A++ AG S + + Sbjct: 259 DAALRRAGAVRVRSFVELFSAAK 281 >gi|14521495|ref|NP_126971.1| hypothetical protein PAB0854 [Pyrococcus abyssi GE5] gi|5458714|emb|CAB50201.1| acdA-3 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain [Pyrococcus abyssi GE5] Length = 457 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 107/259 (41%), Gaps = 21/259 (8%) Query: 37 VGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIP 96 G ++P V + +V + + ++I VP D +I+ E + Sbjct: 36 GGNVYPVN---VREEEVQGVKAYKSVKDIP--GEVDLAIIVVPKKFVKDTLIQCGEKGVK 90 Query: 97 LIVCITEGIPVLDMVR------VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 +V IT G + + R+IGPNC GI+ + ++ +K Sbjct: 91 GVVIITAGFGETGEEGKKEEKELVEIAHRYGMRIIGPNCVGIMNTHADLNATF-ITVAKK 149 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G+V +S+SG L V++T +E +G S + +G + +F +++E E ++I Sbjct: 150 GNVAFISQSGALGAGIVYKTIKEDIGFSKFISVGN--MADLDFAELMEYLADTEEDKAIA 207 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + E +F++ + +KKP++ AGK+ R ++G E Sbjct: 208 LYIE----GIRNGRKFIEVAKRVTKKKPVIALKAGKSESGARAASSHTGSLAGSWKIYE- 262 Query: 271 KINAMKEAGICIAPSPARI 289 A K++G+ +A + + Sbjct: 263 --AAFKQSGVLVANTIDEM 279 >gi|256811312|ref|YP_003128681.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanocaldococcus fervens AG86] gi|256794512|gb|ACV25181.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanocaldococcus fervens AG86] Length = 699 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 72/288 (25%), Positives = 112/288 (38%), Gaps = 21/288 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + K G AI+ G I+P + + + +V + Sbjct: 12 VAVIGASNKEGKV--GYAIIKNLMDFNGKIYPINPKY---DKVLGLKCYKSVLDV--EDN 64 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----RVKARLEKSSSRLIG 126 + +VI VP + E E + V IT G + ++K +K + R+IG Sbjct: 65 IDLAVIVVPNVAVPKVLEECGEKGVKGAVIITAGFSEVGNYELEEKIKEIAKKYNIRVIG 124 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNC GI+ KG V I+S+SG + + +G S V IG Sbjct: 125 PNCLGIMNTHINLNATFAKVFPPKGGVSIISQSGAVLNAILDIAPLLNIGFSKVVSIGNK 184 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + D+LE FL DE T+ +V+ E +FLK K +KKPI+ +G+ Sbjct: 185 A--DIQESDLLEYFLNDEDTKIVVLYIEGLKDK-----RFLKVAKKLSKKKPIIALKSGR 237 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 T + ++G E A KEAGI A + + + Sbjct: 238 TEVGKKAAKSHTGSLAGEDVIYE---AAFKEAGIVRAYTFEELVDLIH 282 >gi|88602746|ref|YP_502924.1| CoA-binding [Methanospirillum hungatei JF-1] gi|88188208|gb|ABD41205.1| CoA-binding protein [Methanospirillum hungatei JF-1] Length = 687 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 105/277 (37%), Gaps = 25/277 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + + ++P+ + +PV+ T+++ E V+ Sbjct: 253 GKVGYAVFRNLLNFKGKLY--PVNPQ------AEDILGIPVYKTLSDIPE--PVEMVVVA 302 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPG 131 +P + I E+ + + V +T G K ++ R++GPNC G Sbjct: 303 IPAPKVPEIIHEAGSRGVKVAVILTAGFRETGEEGKKIEDELLRVARETGIRIVGPNCLG 362 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 I+ P G +G +S+SG + + + +G S+ + +G Sbjct: 363 IIIPPLELNATFDVQSPLSGQIGFISQSGAIITTVLDWSISRRIGFSSVISVGNQ--SDM 420 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 F++ L++ D T +I++ E + +F++ A +KP++ +G + Sbjct: 421 GFMEYLQVLDQDPTTYAIILYVE----EIRDGREFIRYAATMRGRKPVIALKSGSSVRGQ 476 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 ++G I A +++G+ A S + Sbjct: 477 EAASSHTGSLAGSFETY---IAAFRQSGVIPAYSLSE 510 >gi|14590635|ref|NP_142703.1| hypothetical protein PH0766 [Pyrococcus horikoshii OT3] gi|3257174|dbj|BAA29857.1| 457aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 457 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 108/258 (41%), Gaps = 21/258 (8%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPL 97 G ++P V + +V + + + ++I VP D +I+ E + Sbjct: 37 GKVYPVNIKEE---EVQGVKAYKSVKDIPDE--IDLAIIVVPKRFVKDTLIQCGEKGVKG 91 Query: 98 IVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 +V IT G + + K R+IGPNC GI+ ++ +KG Sbjct: 92 VVIITAGFGETGEEGKREEKELVEIAHKYGMRIIGPNCVGIMNTHVDLNATF-ITVAKKG 150 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 +V +S+SG L V++T +E +G S + +G + +F +++E E ++I + Sbjct: 151 NVAFISQSGALGAGIVYKTIKEDIGFSKFISVGN--MADVDFAELMEYLADTEEDKAIAL 208 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDK 271 E +F++ + +KKPI+ AGK+ R ++G E Sbjct: 209 YIE----GVRNGKKFMEVAKRVTKKKPIIALKAGKSESGARAASSHTGSLAGSWKIYE-- 262 Query: 272 INAMKEAGICIAPSPARI 289 A K++G+ +A + + Sbjct: 263 -AAFKQSGVLVANTIDEM 279 >gi|292492067|ref|YP_003527506.1| CoA-binding protein [Nitrosococcus halophilus Nc4] gi|291580662|gb|ADE15119.1| CoA-binding domain protein [Nitrosococcus halophilus Nc4] Length = 890 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 107/283 (37%), Gaps = 25/283 (8%) Query: 21 GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPP 80 G + + + I+PK+ G P + ++ + + +VI P Sbjct: 28 GMTVFKNMLEAGFQGEIHAINPKR--ETVQGK----PAYPSLEALGK--PIDLAVITTPA 79 Query: 81 SGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV------KARLEKSSSRLIGPNCPGILT 134 + D I + + + I+ G + + + + RL+GPNC GI+ Sbjct: 80 TTVPDIIEACGKHGVGAAIIISAGFREMGPMGRELEEKLLFQAQNYGVRLLGPNCLGIMR 139 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 P + G + ++S+SG L + + +G S+ + G +F Sbjct: 140 PPLGLNATFNKGMALPGKLALVSQSGALCTAILDWATYNKIGFSSVISTGISA--DLDFG 197 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM 254 ++L+ + D TESI++ E A F+ R KP++ G+ A Sbjct: 198 EILDYLVLDHHTESILLYIE----GIHHARGFMSALRAAARVKPVIAVKVGRHAGG---- 249 Query: 255 GHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVEL 296 A A +G GA+D A++ AG+ A + ++ L Sbjct: 250 SQAAASHTGALVGADDVFDAALRRAGVVRATTVVQLFSIARTL 292 >gi|57640074|ref|YP_182552.1| acetyl-CoA synthetase II (NDP forming), alpha subunit [Thermococcus kodakarensis KOD1] gi|57158398|dbj|BAD84328.1| acetyl-CoA synthetase II (NDP forming), alpha subunit [Thermococcus kodakarensis KOD1] Length = 458 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 107/259 (41%), Gaps = 21/259 (8%) Query: 37 VGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIP 96 G ++P G V + + + + ++I VP AII++ E + Sbjct: 37 AGKVYPVNVKDEVVQG---VKAYKNIKDIP--GEVDLAIIVVPKRFVKGAIIDAGEKGVK 91 Query: 97 LIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 V IT G + + K R+IGPNC G++ +K Sbjct: 92 GAVIITAGFGETGEEGKREERELVEIAHKYGMRIIGPNCVGVMNTQDDMNATFIM-DAKK 150 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 GS+ +S+SG L V++T +EG+G S V IG + +F +++E + ++I Sbjct: 151 GSIAFISQSGALGAGIVYKTVKEGIGFSKFVSIGN--MADVDFSELMEYLADTKEDKAIA 208 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + E ++ +F+ + +KKP++ AG++ R ++G E Sbjct: 209 LYIE----GLKDGRKFIDVAKRVTKKKPVIALKAGRSESGARAASSHTGSLAGSWKIYE- 263 Query: 271 KINAMKEAGICIAPSPARI 289 A K++G+ +A + + Sbjct: 264 --AAFKQSGVLVADTIDDM 280 >gi|315230865|ref|YP_004071301.1| acetyl-CoA synthetase subunit alpha [Thermococcus barophilus MP] gi|315183893|gb|ADT84078.1| acetyl-CoA synthetase (ADP-forming) alpha chain [Thermococcus barophilus MP] Length = 462 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 68/299 (22%), Positives = 122/299 (40%), Gaps = 25/299 (8%) Query: 1 MSI--LVDKNTKVLVQ--GLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNV 56 MSI L + ++ G GK G + I Y + ++ K G +G Sbjct: 1 MSIEALFKPKSVAVIGASGKPGKIGYAIMKNLIEYGYEGKIYAVNIKGGEIEISGRKFK- 59 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 V+ ++ + + + +VI VP + E + + ++ I+ G L K Sbjct: 60 -VYKSILDVPDE--VDMAVIVVPAKFVPQVVEECGKKGVKVLPIISSGFGELGPEGKKVE 116 Query: 117 ------LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 K R++GPN G++ + + GS+ ++S+SG L + T Sbjct: 117 EQLVETAHKYGMRILGPNIFGVVYTPAKLNATFGPTDVMPGSLALISQSGALGIALMGWT 176 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 E +G S V IG + D+LE F DE T++I++ E ++ +F+K Sbjct: 177 ILEKVGLSAVVSIGNK--SDIDDADLLEYFKDDENTKAILIYME----GVKDGRKFMKAA 230 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED-KINAMKEAGICIAPSPAR 288 + KKPI+ AG++ + A A +G GA+ A K++G+ A + Sbjct: 231 KEVSMKKPIIVIKAGRSERGAK----AAASHTGSLAGADSIYTAAFKQSGVLRALTIGE 285 >gi|124266204|ref|YP_001020208.1| acyl-CoA synthetase [Methylibium petroleiphilum PM1] gi|124258979|gb|ABM93973.1| acyl-CoA synthetase (ADP forming) [Methylibium petroleiphilum PM1] Length = 918 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 99/250 (39%), Gaps = 12/250 (4%) Query: 47 TYWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI 105 + G + + T A +T A+ +VI +PP A+ + + ++ GI Sbjct: 64 QPYAGALQFLDIHATGTLAELAQTRADLAVIALPPQQVASALEVAGRLACRSALVVSSGI 123 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 +K ++ L+GPN G P G + + GS+ ++S+SG LT Sbjct: 124 GAEAAATLKKIAQREGIHLLGPNGLGFQRPALQLNASAAGPLAKPGSLALVSQSGALTTS 183 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + S +G S+ V +G P + VL+ D T SIV+ E S A Sbjct: 184 VLDWASTNAVGFSSVVSLG--PNTSVDIAQVLDYLANDAQTHSIVVYVEGISS----ARH 237 Query: 226 FLKDEAKRGRKKPIVGFVAGK-TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 F+ + KP+V AG+ A H+GA++ G + A++ AG Sbjct: 238 FMSALRSAAKAKPVVVLKAGRKPAGNEAAQTHSGAIV----GSDDVFDAALRRAGAVRVR 293 Query: 285 SPARIGRSLV 294 S + + Sbjct: 294 SFVELFSAAK 303 >gi|183180814|gb|ACC44674.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180816|gb|ACC44675.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180818|gb|ACC44676.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180822|gb|ACC44678.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180824|gb|ACC44679.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180826|gb|ACC44680.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180828|gb|ACC44681.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180830|gb|ACC44682.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180832|gb|ACC44683.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180834|gb|ACC44684.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180838|gb|ACC44686.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180840|gb|ACC44687.1| Cre-D1005.1 [Caenorhabditis remanei] gi|183180842|gb|ACC44688.1| Cre-D1005.1 [Caenorhabditis remanei] Length = 238 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 6/173 (3%) Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 I I+ ++R GSV +SRSG ++ E SQ G + IGGD G Sbjct: 1 KIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELNNIISQNTNGVYEGIAIGGDRYPG 60 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP- 249 + + D + + D+ + IV++GE+GG E + LK ++ KP+V + G A Sbjct: 61 STYTDHVIRYQNDDRVKMIVLLGEVGGVEEYKIVDLLK---QKKVTKPLVAWCIGTCADH 117 Query: 250 --PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GHAGA + A K A++ +G + S +G + + L Sbjct: 118 ITSEVQFGHAGASANALGETAACKNAALRASGALVPESFDDLGNKIRQTYDEL 170 >gi|218884241|ref|YP_002428623.1| AcdA-1 acetate--coA ligase (ADP-forming), alpha chain [Desulfurococcus kamchatkensis 1221n] gi|218765857|gb|ACL11256.1| AcdA-1 acetate--coA ligase (ADP-forming), alpha chain [Desulfurococcus kamchatkensis 1221n] Length = 481 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 68/305 (22%), Positives = 117/305 (38%), Gaps = 25/305 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 + + +V G T K G + + G I+P + + + +V+ Sbjct: 22 FFNPRSVAIV-GATPKEG-KVGRIILENFIKKYKGRIYPVNPGY---NEIMGLKCYRSVS 76 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-----PVLDMVRV--KAR 116 E E + ++I VP + + E E ++ I+ G P + + K Sbjct: 77 ELPE--TPDLAIIVVPAPSVPEVLRELGEKGCKAVIIISGGFKETGTPEGERLEHEIKEL 134 Query: 117 LEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K R+IGPNC GI D+ + KG V +S+SG + + Sbjct: 135 AVKYGIRIIGPNCIGIFDNWSGVDTFFLPEEKMKRPPKGYVAFISQSGAFASALMDWMAY 194 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 +G S A+ G + ID+LE D+ T I++ E +A F++ + Sbjct: 195 NNIGVSRAISYGNK--IDVDDIDLLEYLAGDDKTRVILVYLEGLKNAR--GRIFIETARR 250 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 R KP++ F AGKT R A + + G +A K+AG+ S + + Sbjct: 251 VSRVKPVLVFKAGKT---SRGSLAAASHTAALAGNYSLYRSAFKQAGVIEVESFDEMMDA 307 Query: 293 LVELL 297 + LL Sbjct: 308 VRILL 312 >gi|126179647|ref|YP_001047612.1| CoA-binding domain-containing protein [Methanoculleus marisnigri JR1] gi|125862441|gb|ABN57630.1| CoA-binding domain protein [Methanoculleus marisnigri JR1] Length = 680 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 104/265 (39%), Gaps = 20/265 (7%) Query: 27 QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA 86 A+++ G ++P + + ++ + + +VI VP Sbjct: 256 YAVMHNLLHFPGQLYPVNNKR---PEVQGLKAYPSILDIPN--PVDMAVITVPAKHVPSV 310 Query: 87 IIESIEAEIPLIVCITEGIPVLDM------VRVKARLEKSSSRLIGPNCPGILTPDSCKI 140 I E + + ++V IT G + RV + +R++GPNC G++ P Sbjct: 311 IEECGQKGVSMVVIITAGFKEMGEGGKALEDRVLEIAKGYGTRIVGPNCLGLIVPPKGID 370 Query: 141 GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 + G++ +S+SG + V + ++ +G S + +G FID L Sbjct: 371 TTYVHESPKPGNIAFISQSGAIVNTVVDWSIRQDIGFSAVISVGNQA--DLNFIDFLRFV 428 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAV 260 D T+ I++ E ++ F+K ++ + KP+V +G +A Sbjct: 429 ERDPKTKGIILYIE----EIQDGKTFMKVVSEVSKTKPVVAIKSGSSAKGQAAASSHTGS 484 Query: 261 ISGGKGGAEDKINAMKEAGICIAPS 285 +S G + + A +E+G+ + Sbjct: 485 LS---GSYDVYMEAFRESGVIPVHT 506 >gi|183180836|gb|ACC44685.1| Cre-D1005.1 [Caenorhabditis remanei] Length = 238 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 6/173 (3%) Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 I I+ ++R GSV +SRSG ++ E SQ G + IGGD G Sbjct: 1 KIGNTGGMMDNILSSKLYRPGSVAYVSRSGGMSNELNNIISQNTNGVYEGIAIGGDRYPG 60 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP- 249 + + D + + D+ + IV++GE+GG E + LK ++ KP+V + G A Sbjct: 61 STYTDHVIRYQNDDRVKMIVLLGEVGGVEEYKIVDLLK---QKKVTKPLVAWCIGTCADH 117 Query: 250 --PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GHAGA + A K A++ +G + S +G + + L Sbjct: 118 ITSEVQFGHAGASANALGETAACKNAALRASGALVPESFDDLGNKIRQTYDEL 170 >gi|189218038|ref|YP_001938680.1| acyl-CoA synthetase (ADP forming) alpha and beta chain [Methylacidiphilum infernorum V4] gi|189184896|gb|ACD82081.1| Acyl-CoA synthetase (ADP forming) alpha and beta chain [Methylacidiphilum infernorum V4] Length = 908 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 101/275 (36%), Gaps = 25/275 (9%) Query: 21 GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPP 80 G E I + + ++P + + + E + ++I P Sbjct: 38 GRAIMENLIRWGG--IFYPVNP------YHDEIFGRKSYPNIESLPE--PIDLAIIATPA 87 Query: 81 SGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKARLEKSSSRLIGPNCPGILT 134 + + + A + + I+ G + +V A ++ R+IGPNC G++ Sbjct: 88 PTVPEIMEGCVRASVKGAIIISAGFKEIGKSGKLLEEKVIAIAKRGGVRVIGPNCVGVIL 147 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 P + G + + G + LS+SG L + + + +G S V +G + ++ Sbjct: 148 PHARFNGTFLAGLPKSGHIAFLSQSGALGAAVLDWSFSQNIGFSAFVSLGS--MADVDWG 205 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM 254 D+L D T I++ E G + + FL + +KPI+ AG++ R Sbjct: 206 DILFFLAEDPLTRVILIYMESIG----DPSSFLSAARQVNFQKPILVLKAGRSKEGSRAA 261 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 ++G + A G+ S + Sbjct: 262 LSHTGSLTGSDEVLD---AAFLRTGVLRVASFSEF 293 >gi|316935761|ref|YP_004110743.1| GCN5-like N-acetyltransferase [Rhodopseudomonas palustris DX-1] gi|315603475|gb|ADU46010.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris DX-1] Length = 907 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 100/247 (40%), Gaps = 16/247 (6%) Query: 59 FTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV---K 114 F TV + VI PP + E+ E + + I+ + Sbjct: 57 FKTVDSLARLSFVPDLIVITAPPRSVAKVVAEAGELGVAGAIIISSEMGRGKGSYAEAAN 116 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 KS RLIGPNC GI+ P + + R+G++ ++S+SG + V + + Sbjct: 117 RAARKSGIRLIGPNCLGIMIPGANLNASFAAHMPRRGNLALISQSGAIAAGMVDWAAVKE 176 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G S V IG + D+L+ + AD T +I++ E A +A +F+ Sbjct: 177 IGFSGIVSIGDQ--LDVDIADMLDFYAADLETRAILLYIE----AVTDARKFMSAARAAA 230 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSL 293 R KP+V +G+ A + A A +G GA+ A + AG+ + Sbjct: 231 RVKPVVVVKSGRMAHGAK----AAATHTGAFAGADAVYEAAFRRAGMLRVYDLRELFDC- 285 Query: 294 VELLGSL 300 E LG + Sbjct: 286 AETLGRV 292 >gi|209966034|ref|YP_002298949.1| acetyltransferase [Rhodospirillum centenum SW] gi|209959500|gb|ACJ00137.1| acetyltransferase [Rhodospirillum centenum SW] Length = 900 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 97/284 (34%), Gaps = 23/284 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 G + ++P V + +VA + +VI Sbjct: 26 SIGQVVARNLFNAGFDGPIMPVNP------HERSVEGVLAYNSVAALP--LTPDLAVIAT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGI 132 PP I E E V IT G + K R++GPNC G+ Sbjct: 78 PPQTIPGLIAELGERGTKAAVVITAGFAEMGEDGRKLQQQVLDAARPHLLRVVGPNCLGV 137 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 + P KG + ++++SG + + + G+G S V +GG + + Sbjct: 138 MVPARGVNAGFAHLPPLKGDIALVAQSGAVVTSILDWANARGIGFSHLVSLGG--MADVD 195 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 F D+L+ D +I++ E A A +F+ R KP++ AG++ + Sbjct: 196 FGDMLDYLAQDPNVRAILLYVE----AITHARKFMSAARAAARAKPVIVIKAGRSDEAAK 251 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++G + A + AG+ + ++ L Sbjct: 252 AASSHTGALAGADAVYD---AAFRRAGMLRVSELDELFDAVETL 292 >gi|301057108|ref|ZP_07198248.1| CoA binding domain protein [delta proteobacterium NaphS2] gi|300448789|gb|EFK12414.1| CoA binding domain protein [delta proteobacterium NaphS2] Length = 493 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 111/279 (39%), Gaps = 25/279 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + V ++PK G + VF +V + A + + I Sbjct: 27 GKWGQVILSNILAGGFEGKVFPVNPK------GGKLFGLDVFASVRDI--SHAVDLAFIT 78 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRLIGPNCPG 131 P + E E ++ V I+ G D + K+ +IGPN G Sbjct: 79 TPAHTVPGLLEELGEKKVKGAVIISSGFSETDAAGKDLEKEIVDIARKNHIWIIGPNTMG 138 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 I++P + +KGSV +S+SG L + + Q+G+G S VG G + + Sbjct: 139 IISPHAGLFATGSHPRPKKGSVAFISQSGNLGTQLAYWAEQQGVGISLFVGSGNEAM--L 196 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 D LE + T +V+ E G + +F++ K RKKP++ G TA Sbjct: 197 TCPDYLEYLAHNSNTRYVVLYVENVG----DGFRFMETAEKINRKKPVILLKGGITAAGK 252 Query: 252 RTMGHAGAVISGGKGGAEDKIN-AMKEAGICIAPSPARI 289 + A A +G GG + A ++AGI P+ + Sbjct: 253 K----AAASHTGAMGGDDAVFRGACRQAGILNVSVPSDL 287 >gi|332159046|ref|YP_004424325.1| hypothetical protein PNA2_1406 [Pyrococcus sp. NA2] gi|331034509|gb|AEC52321.1| hypothetical protein PNA2_1406 [Pyrococcus sp. NA2] Length = 458 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 21/259 (8%) Query: 37 VGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIP 96 G ++P V + +V + E + ++I VP D +I+ E + Sbjct: 36 GGKVYPVN---IREEEVQGVKAYKSVKDIPEE--VDLAIIVVPKRFVKDTLIQCGEKGVK 90 Query: 97 LIVCITEGIPVLDMVR------VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 ++ IT G + K R+IGPNC GI+ + ++ +K Sbjct: 91 GVIIITAGFGETGEEGKKEERELVEIAHKYGMRIIGPNCVGIMNTHADLNATF-ITVAKK 149 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G+V +S+SG L V++T +E +G S + +G + +F +++E E ++I Sbjct: 150 GNVAFISQSGALGAGIVYKTIKEDIGFSKFISVGN--MADVDFAELMEYLAETEEDKAIA 207 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + E + +F++ K +KKPI+ AGK+ R ++G E Sbjct: 208 LYIE----GIRDGKRFMEIAKKVSKKKPIIALKAGKSESGARAASSHTGSLAGSWRIYE- 262 Query: 271 KINAMKEAGICIAPSPARI 289 A K+ G+ IA + + Sbjct: 263 --AAFKQTGVLIANTIDEM 279 >gi|158520179|ref|YP_001528049.1| CoA-binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158509005|gb|ABW65972.1| CoA-binding domain protein [Desulfococcus oleovorans Hxd3] Length = 516 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 23/256 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK+ S + VP F +V + ++ + +VI VP +G D I + ++ I Sbjct: 60 PVNPKEASVH------GVPAFASVKDIQDE--IDLAVIIVPAAGVPDIISDCVDKGIGAA 111 Query: 99 VCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 V IT G L + R L+GPN GI P+S P G Sbjct: 112 VVITSGFGELGEEGKGLQNEMLRRARAGGMVLVGPNGQGIAAPESKFYPWFPTFRPDPGV 171 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 +GI S+SG ++ E Q ++ G G S + G + D L F D +T+ +++ Sbjct: 172 IGIASQSGGISTELSEQLAEFGFGCSKVISTGN--CADLSWPDYLAYFRQDPSTKVVLLY 229 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 E ++ F ++ K +KP++ +G+T GR ++G + Sbjct: 230 ME----GAQDGRAFFREAKKTALEKPVILIKSGRTQEGGRAASSHTGSMAGSDAVFDGV- 284 Query: 273 NAMKEAGICIAPSPAR 288 K+AG+ A + Sbjct: 285 --CKQAGLIRAKTLEE 298 >gi|302342544|ref|YP_003807073.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075] gi|301639157|gb|ADK84479.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075] Length = 497 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 97/260 (37%), Gaps = 20/260 (7%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P S G+ + +V + E + +VI +P + + + + + Sbjct: 44 FEGPIYPVHRSESVVLGHKA---YRSVLDLPEAP--DLAVIVLPTKLVAETLEQCGQKGV 98 Query: 96 PLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 V + G + ++ EK R +GPNC G++ + R Sbjct: 99 RQAVICSGGFREVGPEGAALERQLVDTAEKWGIRFVGPNCLGVVNTHHKLSTMFHSYNGR 158 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 G VG+ S+SG+ + GLG ST +G + +D LE D T+ + Sbjct: 159 PGFVGMASQSGSFVTQMFDYLEPLGLGFSTCFSVGNSAN--VDLVDCLEHLGDDPNTKVV 216 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 M E +F++ + +KKP+V + G T G+ ++G + Sbjct: 217 AMYVEALS----RGRRFVEVCRRVSQKKPVVAYYVGGTETGGKAGLSHTGSLAGPDALYD 272 Query: 270 DKINAMKEAGICIAPSPARI 289 ++ G+ A S + Sbjct: 273 GV---FRQCGVVRAQSIEEL 289 >gi|88601867|ref|YP_502045.1| CoA-binding [Methanospirillum hungatei JF-1] gi|88187329|gb|ABD40326.1| CoA-binding protein [Methanospirillum hungatei JF-1] Length = 688 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 104/266 (39%), Gaps = 21/266 (7%) Query: 27 QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA 86 A+++ G ++P + + TV + + + +VI VP Sbjct: 256 YAVMHNLLHFPGKVYPINNKR---DTIQGLKAYPTVLDIPDD-EIDLAVITVPARHVPGV 311 Query: 87 IIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRLIGPNCPGILTPDSCKI 140 + E + + + V IT G + R+ + +R++GPNC G++ P Sbjct: 312 MEECGKKGVKIAVVITAGFKEMSEEGRMLEERIVEIAHRYGTRIVGPNCLGLIIPPIGLD 371 Query: 141 GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 G++ +S+SG + V + + +G S V +G F D L Sbjct: 372 TTYVAQSPNPGNIAFISQSGAIVNTVVDWSLTKDIGFSFVVSVGNQA--DLNFFDYLRAA 429 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP-GRTMGHAGA 259 AD T+ I+M E + F++ ++ R KP+V AG +A H G+ Sbjct: 430 AADPETKVIIMYIE----QIKNGKAFMEIVSEVSRHKPVVALKAGSSARGQAAAASHTGS 485 Query: 260 VISGGKGGAEDKINAMKEAGICIAPS 285 + G + + A +++G+ + + Sbjct: 486 L----SGSYDVYVEAFRKSGVLLVHT 507 >gi|14591299|ref|NP_143377.1| hypothetical protein PH1517 [Pyrococcus horikoshii OT3] gi|3257942|dbj|BAA30625.1| 460aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 460 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 66/313 (21%), Positives = 125/313 (39%), Gaps = 30/313 (9%) Query: 1 MSI--LVDKNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN 55 MS+ L + + + V G + GK G + I Y + ++ K G +G Sbjct: 1 MSLEALFNPKS-IAVIGASSKPGKIGYAIMKNLIEYGYEGKIYPVNIKGGEMEISGRKFK 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 V+ ++ E + + +VI VP + + E + + + I+ G L K Sbjct: 60 --VYKSILEVPDE--VDMAVIVVPAKSVPEVVEECGKKGVKVAPIISSGFGELGEEGKKV 115 Query: 116 R------LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 K R++GPN G++ + + G + ++S+SG L + Sbjct: 116 EQQLVETARKYGMRILGPNIFGVVYTPAKLNATFGPTDVLPGPLALISQSGALGIALMGW 175 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 T E +G S V +G + D+LE F DE T++I++ E ++ +F++ Sbjct: 176 TILEKIGLSAVVSVGNKA--DIDDADLLEFFKDDENTKAILIYME----GVKDGRRFMEV 229 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + +KKPI+ AG++ + ++G A K+ G+ A + I Sbjct: 230 AKEVSKKKPIIVIKAGRSERGAKAAASHTGSLAGSDTIYS---AAFKQTGVLRALT---I 283 Query: 290 GRSL--VELLGSL 300 G + L +L Sbjct: 284 GEAFDWARALSNL 296 >gi|307353320|ref|YP_003894371.1| CoA-binding domain-containing protein [Methanoplanus petrolearius DSM 11571] gi|307156553|gb|ADN35933.1| CoA-binding domain protein [Methanoplanus petrolearius DSM 11571] Length = 690 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 102/261 (39%), Gaps = 20/261 (7%) Query: 27 QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA 86 A+++ G I+P G P +++ + +VI VP Sbjct: 256 YAVMHNLLHFPGQIYPVNNKRSEVQGLKAFPTVSSIPS-----PVDLAVITVPALQVPKI 310 Query: 87 IIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRLIGPNCPGILTPDSCKI 140 + E E IPL+V IT G R+ + R++GPNC G++ P Sbjct: 311 MQECGEKGIPLVVVITAGFKETGTEGKALEDRMLEIARSYNIRIVGPNCLGLIIPPRGLD 370 Query: 141 GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 G + +S+SG + V + + +G S +G +FID L Sbjct: 371 TTYVHESPDSGGIAFISQSGAIINTVVDWSLKNDIGFSAVFSVGNQ--SDLDFIDYLRFV 428 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAV 260 D+ T+++++ E + +F++ ++ +KKP++ +G ++ Sbjct: 429 EQDKNTKAVILYVEQLT----DGREFMEVVSEVAKKKPVIAIKSGSSSKGQAAASSHTGS 484 Query: 261 ISGGKGGAEDKINAMKEAGIC 281 +S G E + A +++G+ Sbjct: 485 LS---GSYEVYMEAFRKSGVI 502 >gi|282165588|ref|YP_003357973.1| acetyl-CoA synthetase [Methanocella paludicola SANAE] gi|282157902|dbj|BAI62990.1| acetyl-CoA synthetase [Methanocella paludicola SANAE] Length = 696 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 115/295 (38%), Gaps = 28/295 (9%) Query: 4 LVDKNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 + + + V V G + GK G + + + ++ I+PK + + + Sbjct: 5 MFNPES-VAVIGASHVKGKVGRAVLDNLLNGYEGKIY-PINPK------SLEIEGLKCYK 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVK 114 TV E + +VI +P A+ E E I +V I+ G + VK Sbjct: 57 TVLEVP--GPIDLAVIVIPSKLVPQAVRECGEKGIKYLVIISAGFKEVGVEGARLENEVK 114 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + R++GPNC GIL + + G+V I+++SG L + + Sbjct: 115 DIARSFNMRIVGPNCLGILNTHTKCNASFAKKMPPAGNVSIITQSGALGTAILDWSDATD 174 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G V +G ID +E + D+ T+ I+ E + +F+ + Sbjct: 175 VGFDCFVSLGNK--SDLNEIDFMEAWKNDDNTKVILAYLE----GITDGRRFIDVAREVS 228 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + KP++ +G+T+ R + ++G + A ++G+ A + + Sbjct: 229 KTKPVIVVKSGRTSAGARAVSSHTGSLAGSDAAYDS---AFMQSGVIRAETMSEF 280 >gi|303243793|ref|ZP_07330133.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanothermococcus okinawensis IH1] gi|302485729|gb|EFL48653.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanothermococcus okinawensis IH1] Length = 704 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 110/283 (38%), Gaps = 18/283 (6%) Query: 16 LTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASV 75 + GK G + + + + I+P + + + +V + + +V Sbjct: 19 IEGKVGHAIMKNLMAFGKNNPDNKIYPINPKY---DEILGIKCYKSVLDVLPD-NIDLAV 74 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----RVKARLEKSSSRLIGPNCPG 131 I +P + + E + I V I+ G + +VK+ +K + R+IGPNC G Sbjct: 75 ITIPAKLIPNILEECGKKGIKGAVIISAGFSEVGNYELEEKVKSIAKKYNIRIIGPNCLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 I+ + F++G++ +S+SG + + LG S V +G Sbjct: 135 IINMHNRLNASFSKEYFKEGNITFISQSGAILTAILDIAPLLNLGFSKIVSLGNK--IDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 + D++E + D+ TE +V E +F++ K + KPI+ +GKT Sbjct: 193 QESDLMEYLIHDDTTEVVVFYIEGLKDK-----KFIESAKKLAKIKPIIALKSGKTEAGA 247 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 + ++ G A+ A K+ + + + + Sbjct: 248 KAASSHTGSLA---GDAQIYNAAFKKGKVLTVETFEELVNLMH 287 >gi|242398520|ref|YP_002993944.1| Acetyl-CoA synthetase I (ACSI, ADP-forming), subunit alpha [Thermococcus sibiricus MM 739] gi|242264913|gb|ACS89595.1| Acetyl-CoA synthetase I (ACSI, ADP-forming), subunit alpha [Thermococcus sibiricus MM 739] Length = 465 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 71/313 (22%), Positives = 126/313 (40%), Gaps = 30/313 (9%) Query: 1 MSI--LVDKNTKVLVQ--GLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNV 56 MSI L + +V G GK G + I Y + ++ K G +G Sbjct: 4 MSIEALFKPRSVAVVGASGKPGKIGYAIMKNLIEYGYEGKIYAVNVKGGEIEVSGRKFK- 62 Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 V+ ++ + + + +V+ VP + E + + ++ I+ G L K Sbjct: 63 -VYESILDVPDE--VDMAVVVVPAKFVSQVVEECGKKGVKVLPIISSGFGELGEEGKKVE 119 Query: 117 ------LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 K R++GPN GI+ + + G + ++S+SG L + T Sbjct: 120 EQLVETAHKYGMRILGPNIFGIVYTPAKLNATFGPTDVLPGKLALVSQSGALGIALMGWT 179 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 E +G S V IG + D+LE F DE T +I++ E ++ +F++ Sbjct: 180 ILEKVGLSAVVSIGNK--SDLDDADMLEYFENDENTGAILIYME----GVKDGRKFMETA 233 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED-KINAMKEAGICIAPSPARI 289 + KKPI+ AG++ + A A +G GA+ A K++G+ A + I Sbjct: 234 KRVSMKKPIIIIKAGRSERGAK----AAASHTGSLAGADSIYTAAFKQSGVLRALT---I 286 Query: 290 GRSL--VELLGSL 300 G + L +L Sbjct: 287 GEAFDWARTLSNL 299 >gi|116335001|ref|YP_802496.1| succinyl-CoA synthetase alpha subunit [Candidatus Carsonella ruddii PV] gi|116235282|dbj|BAF35130.1| succinyl-CoA synthetase alpha subunit [Candidatus Carsonella ruddii PV] Length = 274 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 89/258 (34%), Positives = 149/258 (57%), Gaps = 16/258 (6%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 +++ N +L G+TGK G HT+ +I + T++ GI+ K G ++P++++ Sbjct: 1 MINNN--ILSYGITGKFGFQHTKVSINF-GTKIKCGINNSKNG----GIVFHIPIYSSAI 53 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR 123 +A + SV+Y+P I+E+I + I +I+CITE I V D++++K EK Sbjct: 54 KAVKSNNCKISVLYIPYFVCKKTILENIYSGIKIIICITENISVFDILKIKYYCEKYKII 113 Query: 124 LIGPNCPGILTPD-SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 IGPN PG++ P ++GI+P SI +KG + I+S+SGTLTYEA+ +S+ +GQS +G Sbjct: 114 FIGPNSPGLILPFLKIRLGIIPISIIKKGKLAIISKSGTLTYEAIKISSKI-IGQSICIG 172 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IGGD + G ++ +L ++ T+ I+++GEIGG+ E K I + Sbjct: 173 IGGDIISGCNIKNIFKLVFLNKFTKKILIIGEIGGNFEN-------VITTCKVNKKIFFY 225 Query: 243 VAGKTAPPGRTMGHAGAV 260 + G +P + MGHAGA+ Sbjct: 226 IVGIFSPLEKKMGHAGAI 243 >gi|284161406|ref|YP_003400029.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Archaeoglobus profundus DSM 5631] gi|284011403|gb|ADB57356.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Archaeoglobus profundus DSM 5631] Length = 663 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 110/289 (38%), Gaps = 31/289 (10%) Query: 10 KVL-VQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG----GNVNVPVFTTVAE 64 + + V G T K G ++ + KG Y + V + +V + Sbjct: 8 RAIAVIGATPKEG---------KVGNTLLKNLSKFKGKIYAVNPKYREVLGVECYPSVKD 58 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM----VRVKARLEKS 120 E + +VI VP + E E + V I+ G + + + +K Sbjct: 59 LPEE--VDLAVIAVPAEVVPKVLEECGEKGVKAAVVISAGFREVGNYKLEMELVEICKKY 116 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +++GPNC GI+ + G +G + ++S+SG L + +G S Sbjct: 117 GIKMVGPNCLGIINTSNGLNATFSGVEPLRGRIALISQSGALIVAIMDWALANNIGFSKI 176 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 V +G + D +E D+ TE I + E EE +F++ +KPIV Sbjct: 177 VSLGNKAL--LNECDFIEYLSNDDETEVIALYVE----GIEEGRRFME--IAEKCRKPIV 228 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +GKT+ + + ++ G E A +++G+ A S + Sbjct: 229 AIKSGKTSAGAKAVSSHTGSLA---GSYEACRTAFRQSGVVEAESVEEL 274 >gi|147920675|ref|YP_685524.1| acetyl-CoA synthetase (ADP-forming), alpha and beta subunit fusion [uncultured methanogenic archaeon RC-I] gi|110620920|emb|CAJ36198.1| acetyl-CoA synthetase (ADP-forming), alpha and beta subunit fusion [uncultured methanogenic archaeon RC-I] Length = 694 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 98/263 (37%), Gaps = 20/263 (7%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P + + +V + + + +VI +P A+ E E I Sbjct: 35 FKGAIYPINPKAT---EIEGIKCYKSVLDVP--GSIDLAVIVIPARFVAQAVKECGEKGI 89 Query: 96 PLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 ++ I+ G + VK + R++GPNC G+L S + Sbjct: 90 KNVIIISAGFKEVGVEGARLENEVKEVAKSYGIRIVGPNCLGVLNTYSGCNASFAKKMPP 149 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 +G + I+S+SG L + + + +G + V G ID ++ + D+ T I Sbjct: 150 RGHMSIISQSGALGTAILDWSEKTDIGFANFVSFGNKA--DLNEIDFMQAWKDDKETNII 207 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 + E + +F+ + R+KPIV +G+T+ R ++G + Sbjct: 208 LAYLESITDGQ----RFINVAREVSREKPIVIIKSGRTSAGARAASSHTGSLAGADAAYD 263 Query: 270 DKINAMKEAGICIAPSPARIGRS 292 A + G+ A + Sbjct: 264 S---AFAQCGVIRAETMDEFFDL 283 >gi|47204726|emb|CAF96044.1| unnamed protein product [Tetraodon nigroviridis] Length = 535 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 76/196 (38%), Gaps = 29/196 (14%) Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 I P C I I+ ++R GSV +SRSG ++ E S+ G V IG Sbjct: 4 IKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVFEGVAIG 63 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVG-----------------------EIGGSAEE 221 GD G+ F D + + E IV++G +IGG+ E Sbjct: 64 GDRYPGSVFTDHVLRYQDTPGVEMIVVLGEVSNRQHADPCCFSLPDTHSVWVQIGGTEEY 123 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEA 278 + + ++ KP+V + G A GHAGA + A K A+KEA Sbjct: 124 KICEAIQRGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNKALKEA 180 Query: 279 GICIAPSPARIGRSLV 294 G + S +G + Sbjct: 181 GAFVPKSFDELGEVIR 196 >gi|121594379|ref|YP_986275.1| GCN5-like N-acetyltransferase [Acidovorax sp. JS42] gi|120606459|gb|ABM42199.1| GCN5-related N-acetyltransferase [Acidovorax sp. JS42] Length = 908 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 101/252 (40%), Gaps = 12/252 (4%) Query: 45 GSTYWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE 103 + +TG + + T+ A +T A+ ++I PP A+ + + ++ Sbjct: 48 AAQRFTGTLTYLDIHTSGTLADLAQTRADLAIIAQPPQDLPAALEVAGRINCRSALVLSN 107 Query: 104 GIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLT 163 G+ +++ + L+GPN G+ P G + R+GS+ ++ +SG LT Sbjct: 108 GVDAQLAEQLRKIARREGIHLLGPNSLGMQRPSLQLNASAAGPLAREGSLALVCQSGALT 167 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 + S +G S+ + +G P + L+ D T+SIV+ E + A Sbjct: 168 SSILDWASNNAVGFSSVISLG--PHTDVGLSEALDFLANDARTQSIVVYME----GIQNA 221 Query: 224 AQFLKDEAKRGRKKPIVGFVAGK-TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +F+ KP+V AG+ A H+ A++ G + A++ AG Sbjct: 222 RRFMSALRSAAYAKPVVVLKAGRKPAGNEAAQTHSAAIV----GSDDVFDAALRRAGAVR 277 Query: 283 APSPARIGRSLV 294 S + + Sbjct: 278 VRSFVELFSAAK 289 >gi|222111025|ref|YP_002553289.1| gcn5-like n-acetyltransferase [Acidovorax ebreus TPSY] gi|221730469|gb|ACM33289.1| GCN5-related N-acetyltransferase [Acidovorax ebreus TPSY] Length = 901 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 101/252 (40%), Gaps = 12/252 (4%) Query: 45 GSTYWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE 103 + +TG + + T+ A +T A+ ++I PP A+ + + ++ Sbjct: 41 AAQRFTGTLTYLDIHTSGTLADLAQTRADLAIIAQPPQDLPAALEVAGRINCRSALVLSN 100 Query: 104 GIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLT 163 G+ +++ + L+GPN G+ P G + R+GS+ ++ +SG LT Sbjct: 101 GVDAQLAEQLRKIARREGIHLLGPNSLGMQRPSLQLNASAAGPLAREGSLALVCQSGALT 160 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 + S +G S+ + +G P + L+ D T+SIV+ E + A Sbjct: 161 SSILDWASNNAVGFSSVISLG--PHTDVGLSEALDFLANDARTQSIVVYME----GIQNA 214 Query: 224 AQFLKDEAKRGRKKPIVGFVAGK-TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +F+ KP+V AG+ A H+ A++ G + A++ AG Sbjct: 215 RRFMSALRSAAYAKPVVVLKAGRKPAGNEAAQTHSAAIV----GSDDVFDAALRRAGAVR 270 Query: 283 APSPARIGRSLV 294 S + + Sbjct: 271 VRSFVELFSAAK 282 >gi|39937300|ref|NP_949576.1| GCN5-like N-acetyltransferase [Rhodopseudomonas palustris CGA009] gi|192293080|ref|YP_001993685.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris TIE-1] gi|39651158|emb|CAE29681.1| GCN5-related N-acetyltransferase:CoA Binding Domain [Rhodopseudomonas palustris CGA009] gi|192286829|gb|ACF03210.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris TIE-1] Length = 907 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 16/247 (6%) Query: 59 FTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV---K 114 F TV E + VI PP + E+ E + + I+ + Sbjct: 57 FKTVGSLAELSFVPDLIVITAPPRSVAKVVAEAGELGVAGAIIISSEMGRGKGSYAEAAN 116 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 KS RLIGPNC GI+ P + R+G++ ++S+SG + V + + Sbjct: 117 RAARKSGIRLIGPNCLGIMIPGVNLNASFAAHMPRRGNLALISQSGAIAAGMVDWAAVKE 176 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G S V IG + D+L+ + AD T +I++ E A +A +F+ Sbjct: 177 IGFSGIVSIGDQ--LDVDIADMLDFYAADLDTRAILLYIE----AVTDARKFMSAARAAA 230 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSL 293 R KP+V +G+ A + A A +G GA+ A + AG+ + Sbjct: 231 RVKPVVVVKSGRMAHGAK----AAATHTGAFAGADAVYEAAFRRAGMLRVYDLRELFDC- 285 Query: 294 VELLGSL 300 E LG + Sbjct: 286 AETLGRV 292 >gi|53803445|ref|YP_114834.1| acetyltransferase [Methylococcus capsulatus str. Bath] gi|53757206|gb|AAU91497.1| acetyltransferase, GNAT family [Methylococcus capsulatus str. Bath] Length = 892 Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 94/236 (39%), Gaps = 18/236 (7%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRL 124 + ++I P + E E + + + G D + RL Sbjct: 70 VDLALIATPAPTVPGILRECGEQNVRAAIVFSAGFGDGDDQGRRLSQSLLTEAGNQGIRL 129 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPNC G++ P ++ G + ++S+SG L V S +G S IG Sbjct: 130 LGPNCLGLMRPSLNLNATFSNNVALPGGLALVSQSGALCTAIVDWASAHRIGFSVVASIG 189 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 +F D+L+ D+ T SI++ E +A +F+ R KP++ A Sbjct: 190 SA--YDLDFGDILDYLALDQETRSILLYVE----GIRDARRFMSGLRAAARLKPVIVIKA 243 Query: 245 GKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G+ A R H GA++ G + A+K AG+ A + ++ + +LL S Sbjct: 244 GRYAEGSRAAVSHTGALV----GADDVFDAALKRAGVVRAKTIEQLFAA-AQLLAS 294 >gi|159905087|ref|YP_001548749.1| CoA-binding domain-containing protein [Methanococcus maripaludis C6] gi|159886580|gb|ABX01517.1| CoA-binding domain protein [Methanococcus maripaludis C6] Length = 702 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 59/304 (19%), Positives = 113/304 (37%), Gaps = 28/304 (9%) Query: 1 MSIL---VDKNTKVLVQG---LTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV 54 M+ L + + V V G + GK G + + + Q G ++P Sbjct: 1 MNTLEGIFNPKS-VAVIGASEIEGKVGQSVMKNLLNF--KQHGGKVYPINKKY---NEVY 54 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM---- 110 + + +V + E + +I +P A DA+ E + + IT G + Sbjct: 55 GIKCYGSVLDVPE--TPDLVIISIPAEYAVDAMEECGRKGVKAAIIITAGFAETNNHVLE 112 Query: 111 VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 R+KA +E+ R IGPNC G++ + G++ +S+SG + + Sbjct: 113 DRLKAIIEQYGIRTIGPNCLGVINLHNHLNASFSKEFSNMGNIAFISQSGAIMTALLDIA 172 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + LG S V +G + ++L D T+ + + E +F+ Sbjct: 173 NYYNLGFSKIVSMGNK--IDVQEYELLNYLENDPHTKVVALYIEGLKDE-----KFISAA 225 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 K RKKP++ +GK+ + ++G + A K++ + S + Sbjct: 226 KKISRKKPVIVLKSGKSEEGAKAASSHTGSLAGNNAVYD---AAFKKSRVFNVESFEDLV 282 Query: 291 RSLV 294 L Sbjct: 283 NLLK 286 >gi|219850672|ref|YP_002465105.1| acetyl coenzyme A synthetase (ADP forming), alpha domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219544931|gb|ACL26669.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Chloroflexus aggregans DSM 9485] Length = 696 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 112/280 (40%), Gaps = 23/280 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 + G + I + + IHP+ + + +V + + + +VI + Sbjct: 22 RLGHRVLKNIIDHGYQGRIYPIHPR------ATEVLGWRAYRSVLDVPD--PIDLAVIVI 73 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGI 132 PP A+ E + +V IT G + + A + + R++GPN GI Sbjct: 74 PPQHVNAAVEECGRKGVRGLVVITAGFKEVGGAGRDLERELLAIVRRYGMRMVGPNSLGI 133 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 + S S+ G++ ++S+SG + + + Q+G+G S V +G + Sbjct: 134 IDTISRLNASFASSMPLPGNIALMSQSGAICAAILDWSQQQGIGFSRFVSLGNKA--DVD 191 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 + +LE + DE ++ I+ E A ++ F++ + + P+V +G TA R Sbjct: 192 EVALLEAWNHDEHSKVILAYLE----AIDDGPNFIRVAREVTKTTPVVAIKSGTTAAGTR 247 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 ++G + E A ++GI A + + Sbjct: 248 AASSHTGSLAGSERAYE---AAFAQSGILRARTMNELFDL 284 >gi|283782387|ref|YP_003373142.1| CoA-binding domain-containing protein [Pirellula staleyi DSM 6068] gi|283440840|gb|ADB19282.1| CoA-binding domain protein [Pirellula staleyi DSM 6068] Length = 911 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 54/237 (22%), Positives = 92/237 (38%), Gaps = 17/237 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV-----LDMVRVKARLEKS--SS 122 + VI P + I + + I +V I+ G + + + ++KS Sbjct: 69 KPDLVVICTPSTTVPKLIEQCGQLGIMGVVIISAGFREVGPAGMQLEQQIREIQKSYPGL 128 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPNC G L PD + + G + LS+SG L + G+G S V Sbjct: 129 RVLGPNCLGFLVPDLKLSASFARGMPKPGRLAFLSQSGALCTAVLDWALDAGIGFSHFVS 188 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G G + D+L+ AD T+++++ E A +F+ KPIV + Sbjct: 189 LGNMLDVGLD--DMLDYLAADPTTDAVILYVESIS----RAREFMSAARAFASHKPIVAY 242 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 AG+ + + ++G E A + AGI + ELL Sbjct: 243 KAGRFSDSAKAASSHTGAMAGVDAVYE---AAFQRAGIVRVFDVDDMFDC-AELLSR 295 >gi|225182006|ref|ZP_03735438.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Dethiobacter alkaliphilus AHT 1] gi|225167291|gb|EEG76110.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Dethiobacter alkaliphilus AHT 1] Length = 707 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 109/298 (36%), Gaps = 27/298 (9%) Query: 4 LVDKNTKVLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 L + ++ + V G + K G E V ++P+ + +T Sbjct: 7 LFNPDS-IAVIGASNNKEKIGFVIMENIQNSGFQGKVYPVNPR------EKEILGYTCYT 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR---- 116 ++ + + + +VI VP + D E E+ + +V +T G + +K Sbjct: 60 SIGKIGQ--PVDVAVISVPAQLSLDVARECGESGVKFLVVVTAGFKEIGDEGLKREKELL 117 Query: 117 --LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + R++GPN GI+ + ++G + +S+SG + + G Sbjct: 118 KICRQHKMRMVGPNVVGIMDTHTPANASFAEGFPKQGEIAFISQSGAMLLAIFDWSRSVG 177 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 LG S V +G +D + D T I+ E + +FL ++ Sbjct: 178 LGFSRFVSMGNKA--DLNEVDFIWSAAQDPNTRVILCYIEDVA----DGKRFLDVVSEAC 231 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 +KKP++ +G + R ++G + A ++ G+ A + + + Sbjct: 232 KKKPVIILKSGTSQAGARAASSHTGALAGSDLAYDT---AFRQCGVIRAETMSDLFDL 286 >gi|57640600|ref|YP_183078.1| acetyl-CoA synthetase I (NDP forming), alpha subunit [Thermococcus kodakarensis KOD1] gi|57158924|dbj|BAD84854.1| acetyl-CoA synthetase I (NDP forming), alpha subunit [Thermococcus kodakarensis KOD1] Length = 465 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 117/295 (39%), Gaps = 26/295 (8%) Query: 15 GLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANAS 74 G GK G + + Y + ++ K G +G PV+ ++ + + + + Sbjct: 22 GKPGKIGYAIMKNLVDYGYEGKIYAVNVKGGEIEISGRK--FPVYKSILDVPDE--VDMA 77 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR------LEKSSSRLIGPN 128 VI VP + E + + ++ I+ G L K K R++GPN Sbjct: 78 VIVVPAKFVPQVVEECGQKGVKVLPIISSGFGELGEEGKKVEQQLVETAHKYGMRILGPN 137 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 G++ + G + ++S+SG L + T E +G S V +G Sbjct: 138 IFGVVYTPEKLNATFGPTDVLPGPLALISQSGALGIALMGWTILEKVGLSAVVSVGNK-- 195 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 + D+LE F DE T +I++ E ++ +F++ KPIV AG++ Sbjct: 196 SDIDDADLLEYFKEDENTRAILIYME----GVKDGRRFMEVAKDVSMVKPIVVIKAGRSE 251 Query: 249 PPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSL--VELLGSL 300 + A A +G G++ A K++G+ A + IG + L +L Sbjct: 252 RGAK----AAASHTGSLAGSDKVFDAAFKQSGVIRAYT---IGEAFDYARTLSNL 299 >gi|171915331|ref|ZP_02930801.1| acetyl-CoA synthetase [Verrucomicrobium spinosum DSM 4136] Length = 916 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 110/294 (37%), Gaps = 25/294 (8%) Query: 13 VQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAAN 72 V G + K G+ A+L T ++P G VA + + Sbjct: 36 VIGASDKPGSVGA--ALLQNLTTWGKPVYPVHPVHTSLQGQQAW---REVAAIP--HSVD 88 Query: 73 ASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIG 126 +V+ P I + IP V ++ G + A + R++G Sbjct: 89 LAVVATPAETVPGIIRQCANCGIPAAVILSAGFKETGSKGARLEQEVMAEARRGRMRILG 148 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNC G++ P + + R GSV LS+SG L + + +E +G S V +G Sbjct: 149 PNCLGLMMPHAGLNASFSATSARPGSVAFLSQSGALCTAVLDWSLREKVGFSGFVSLGS- 207 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + + DV+ F + T SIV E G +A +FL + K I+ G+ Sbjct: 208 -LLDVGWGDVISYFGDEPHTRSIVCYMESAG----DARRFLSAAREVALTKTIIVLKVGR 262 Query: 247 T-APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 T A H GA+ G+ D A AG+ + + ++ E+L Sbjct: 263 TEAAARAAASHTGAL--TGRDAVLD--AAFHRAGVLRVNTLEEM-FNMAEVLAK 311 >gi|82702800|ref|YP_412366.1| GCN5-related N-acetyltransferase [Nitrosospira multiformis ATCC 25196] gi|82410865|gb|ABB74974.1| GCN5-related N-acetyltransferase [Nitrosospira multiformis ATCC 25196] Length = 889 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 99/282 (35%), Gaps = 20/282 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G E + + I+PK P ++++ +VI Sbjct: 25 GKVGYVVFENMLKSGFQGALYPINPK------YPEVQGRPAYSSI--GVIHEPVELAVIA 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD---MVRVKARLEKSSSRLIGPNCPGILT 134 PP I + + IT G ++ A RL+GPNC GI+ Sbjct: 77 TPPQTVPGIIENCGNEGVKAAIIITAGFQEEGDRLEEQLLATARAFGIRLVGPNCLGIMR 136 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 P G++ +S+SG L + +G S+ V +G +F Sbjct: 137 PSIGLNATFYKGGANSGNIAFVSQSGALCTAILDWAQNNDVGFSSIVSMGSS--TDVDFG 194 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM 254 ++L+ +AD AT+SI+M E +A +F+ R KP++ G+ A + Sbjct: 195 EILDYLVADTATQSILMYIE----GIRDARRFMSALRAATRLKPVIVVKVGRHAAGAKAA 250 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + G A+ G + ++ + L Sbjct: 251 RSHTAALVGAD---NVFNAALNRVGAVRVQTVTQLFTAAKAL 289 >gi|305663979|ref|YP_003860267.1| branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit ;acetyl-CoA synthetase (ADP-forming) alpha subunit [Ignisphaera aggregans DSM 17230] gi|304378548|gb|ADM28387.1| branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit ;acetyl-CoA synthetase (ADP-forming) alpha subunit [Ignisphaera aggregans DSM 17230] Length = 463 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 63/282 (22%), Positives = 110/282 (39%), Gaps = 21/282 (7%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 K G+ + I Y + I+P + + + + +++ + +V+ V Sbjct: 24 KIGSIILKNLIEYGYQGRIYPINP------YANELMGLRAYPSISSV--EGPVDVAVVSV 75 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV----KARLEKSSSRLIGPNCPGILT 134 P D I ++ +A + V I+ G + V + R K R++GPN G + Sbjct: 76 PAKNVLDVIDDAGKAGVKFAVVISSGFKEVGNVELEEELVRRAHKYGIRVLGPNIFGYVY 135 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 S G+V +S+SG L + T E +G S+ V IG E Sbjct: 136 TPSRINASFGPRDVIPGNVAFISQSGALGIALMGTTILENIGVSSIVSIGNKA--DLEDA 193 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM 254 D LE F D T I++ E + +F++ + KKPI+ +G+T + Sbjct: 194 DFLEFFENDPNTSVILLYIE----GVRDGRRFIEIAGRVSLKKPIIAIKSGRTEAGAKAA 249 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++GG E A+K+AGI A + + L Sbjct: 250 ASHTGSLAGGPVIWET---ALKQAGILFAKTVEDAFDWVKAL 288 >gi|134046447|ref|YP_001097932.1| CoA-binding domain-containing protein [Methanococcus maripaludis C5] gi|132664072|gb|ABO35718.1| CoA-binding domain protein [Methanococcus maripaludis C5] Length = 702 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 57/304 (18%), Positives = 114/304 (37%), Gaps = 28/304 (9%) Query: 1 MSIL---VDKNTKVLVQG---LTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV 54 M+ L + + V V G + GK G + + + Q G ++P Sbjct: 1 MNTLEGIFNPKS-VAVIGASEIEGKVGQSVMKNLLNF--KQHGGKVYPINKKY---NEVY 54 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM---- 110 + + +V + E + +I +P A DA+ E + + + IT G + Sbjct: 55 GIKCYGSVLDLPEAP--DLVIISIPAEYAVDAMEECGKKGVKSAIIITAGFAETNNHVLE 112 Query: 111 VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 ++KA +++ R IGPNC G++ + G++ +S+SG + + Sbjct: 113 DKLKAIIDQYGIRTIGPNCLGVINLHNHLNASFSKEFSNMGNIAFISQSGAIMTALLDIA 172 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + LG S V +G + ++L D T+ + + E +F+ Sbjct: 173 NYYNLGFSKIVSMGNK--IDVQEYELLNYLENDPHTKVVALYIEGLKDE-----KFISAA 225 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 K RKKP++ +GK+ + ++G + A K++ + S + Sbjct: 226 KKISRKKPVIVLKSGKSEEGAKAASSHTGSLAGNNAVYD---AAFKKSRVFNVESFEDLV 282 Query: 291 RSLV 294 L Sbjct: 283 NLLK 286 >gi|150403176|ref|YP_001330470.1| CoA-binding domain-containing protein [Methanococcus maripaludis C7] gi|150034206|gb|ABR66319.1| CoA-binding domain protein [Methanococcus maripaludis C7] Length = 703 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 111/298 (37%), Gaps = 25/298 (8%) Query: 4 LVDKNTKVLVQG---LTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 + + + V V G + GK G + + + Q G ++P + + Sbjct: 7 IFNPKS-VAVIGASEIEGKVGQSVMKNLLNF--KQHGGKVYPINKKY---NEVYGIKCYG 60 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM----VRVKAR 116 +V + E + +I +P A DA+ E + + IT G + R+K+ Sbjct: 61 SVLDIPE--TPDLVIISIPAEYAVDAMEECGRKGVKSAIIITAGFAETNNHVLEDRLKSI 118 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 +E+ R IGPNC G++ + G++ +S+SG + + + LG Sbjct: 119 IEQYGIRTIGPNCLGVINLHNHLNASFSKEFSNMGNIAFISQSGAIMTALLDIANYYNLG 178 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S V +G + ++L D T+ + + E +F+ K RK Sbjct: 179 FSKIVSMGNK--IDVQEYELLNYLENDPHTKVVALYIEGLKDE-----KFISAAKKISRK 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KP++ +GK+ + ++G + A K++ + S + L Sbjct: 232 KPVIVLKSGKSEEGAKAASSHTGSLAGNSAVYD---AAFKKSRVFNVESFEDLVNLLK 286 >gi|45357816|ref|NP_987373.1| CoA-binding domain-containing protein [Methanococcus maripaludis S2] gi|45047376|emb|CAF29809.1| acetyl-CoA synthetase (ADP-forming), alpha and beta subunits [Methanococcus maripaludis S2] Length = 702 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 58/304 (19%), Positives = 113/304 (37%), Gaps = 28/304 (9%) Query: 1 MSIL---VDKNTKVLVQG---LTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV 54 M+ L + + V V G + GK G + + + Q G ++P Sbjct: 1 MNTLEGIFNPKS-VAVIGASEIEGKVGQSVMKNLLNF--KQHGGKVYPINKKY---NEVY 54 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM---- 110 + + +V + E + +I +P A DA+ E + + IT G + Sbjct: 55 GIKCYGSVLDVPE--TPDLVIISIPAEYAVDAMEECGRKGVKAAIIITAGFAETNNHVLE 112 Query: 111 VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 R+KA +++ R IGPNC G++ + G++ +S+SG + + Sbjct: 113 DRLKAIIDQYGIRTIGPNCLGVINLHNHLNASFSKEFSNMGNIAFISQSGAIMTALLDIA 172 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + LG S V +G + ++L D T+ + + E +F+ Sbjct: 173 NYYNLGFSKIVSMGNK--IDVQEYELLNYLENDPHTKVVALYIEGLKDE-----KFISAA 225 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 K RKKP++ +GK+ + ++G + A K++ + S + Sbjct: 226 KKISRKKPVIVLKSGKSEEGAKAASSHTGSLAGNNAVYD---AAFKKSRVFNVESFEDLV 282 Query: 291 RSLV 294 L Sbjct: 283 NLLK 286 >gi|171060913|ref|YP_001793262.1| GCN5-like N-acetyltransferase [Leptothrix cholodnii SP-6] gi|170778358|gb|ACB36497.1| GCN5-related N-acetyltransferase [Leptothrix cholodnii SP-6] Length = 904 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 49/230 (21%), Positives = 95/230 (41%), Gaps = 13/230 (5%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 A+ ++I +P A+ + + ++ G+PV + A + L+G Sbjct: 75 AHARADLAIIALPHERITAALEIAGRIRCRAALVLSSGVPVQPCAELHAIARRHGVHLLG 134 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN G P G + G + ++S+SG LT + + G+G S+ + +G + Sbjct: 135 PNSLGFQRPHLKLNASTAGRLANAGPLALVSQSGALTASMLDWAACNGVGFSSVISLGAN 194 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + VL+ D AT+SI++ E A +F+ KP+V AG+ Sbjct: 195 --TAVDLPQVLDFLANDAATQSILVYLE----GIHNARRFMSALRAAASAKPVVVMKAGR 248 Query: 247 TAPPGR-TMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARIGRSLV 294 R + H+ A++ G++D A ++ AG+ S ++ + Sbjct: 249 QPAGSRAALTHSAAIV-----GSDDVFEAVLRRAGVVRVRSFTQMFSAAK 293 >gi|325959383|ref|YP_004290849.1| CoA-binding domain-containing protein [Methanobacterium sp. AL-21] gi|325330815|gb|ADZ09877.1| CoA-binding domain protein [Methanobacterium sp. AL-21] Length = 695 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 116/298 (38%), Gaps = 29/298 (9%) Query: 1 MSILVDKNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVP 57 ++++ + + V V G + GK G + Y +V I+PK G + +P Sbjct: 2 LNVMFNAKS-VAVIGASETKGKIGNDLMISLLNYYHGDIV-PINPK------GGEVMGIP 53 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK--- 114 T++ + + +VI +P A+ + E I +V I+ G + Sbjct: 54 AHTSIKDY---GYVDLAVIVIPAPLVLRAVRDCGETGIKNVVVISAGFKEASEEGARLEK 110 Query: 115 ---ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + + L+GPNC GI+ + I KG +G +++SG + + Sbjct: 111 ELVEICNEFNINLVGPNCLGIMNTYNDMNASFSSDIAHKGKIGFMTQSGAIFAAILDYAD 170 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 ++ +G S + +G G + +E F+ DE T I E + F++ Sbjct: 171 KKNIGFSRLISLGNKA--GVNEKECMENFMEDENTGVITAYLE----GIVDGPGFIQASR 224 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 K +KKP+V +G TA + I+G + A + GI A S + Sbjct: 225 KASKKKPVVVIKSGTTAKGSEAVSSHTGTIAGSDSAYD---AAFSQCGILRASSLEEM 279 >gi|149036442|gb|EDL91060.1| succinate-CoA ligase, GDP-forming, alpha subunit, isoform CRA_c [Rattus norvegicus] Length = 129 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 71/109 (65%), Positives = 84/109 (77%), Gaps = 1/109 (0%) Query: 110 MVRVKARL-EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 MVRVK +L + +RLIGPNCPGI+ P CKIGIMPG I +KG +GI+SRSGTLTYEAV Sbjct: 1 MVRVKHKLTRQGKTRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVH 60 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 QT+Q GLGQS +GIGGDP GT FID L++FL D ATE IV++G I Sbjct: 61 QTTQVGLGQSLCIGIGGDPFNGTNFIDCLDVFLKDPATEGIVLIGVIVS 109 >gi|84685007|ref|ZP_01012906.1| acetyltransferase, GNAT family protein [Maritimibacter alkaliphilus HTCC2654] gi|84666739|gb|EAQ13210.1| acetyltransferase, GNAT family protein [Rhodobacterales bacterium HTCC2654] Length = 893 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 58/271 (21%), Positives = 106/271 (39%), Gaps = 23/271 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P GG P T V + +VI P I + EA I Sbjct: 40 FGGTIYPINPKHKKVGGLTCYPSATAVGR-----EIDLAVIATPARTVPGIIRDCGEAGI 94 Query: 96 PLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 + ++ G +KA +++ R +GPNC G++ P + + Sbjct: 95 RNAIVLSAGFGEGGNKGANFEADLKAAAKRAGIRFMGPNCVGLVRPWNKMNATFLRAGTP 154 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 +G + ++S+SG L LG S V +G +F D+L+ +D T++I Sbjct: 155 RGRLALISQSGALCSAISDWAGPHHLGFSALVSLGNS--IDIDFGDMLQYLASDHHTDAI 212 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 ++ E A F+ R KP++ +G+ + + A +G G++ Sbjct: 213 LLYVE----GVRHAPGFISALRYAARLKPVIVLKSGRHS----SSSEAAHTHTGALIGSD 264 Query: 270 DKINA-MKEAGICIAPSPARIGRSLVELLGS 299 +A ++ AG A + ++ + E+L S Sbjct: 265 AVFDAVLERAGAVRAMTFGQLFAA-AEILSS 294 >gi|288225756|gb|ADC44446.1| ATP citrate lyase [Felis catus] Length = 186 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 14/187 (7%) Query: 93 AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMP 144 ++I I I EGIP ++ + ++ +IGP G + P KIG I+ Sbjct: 2 SQIRTIAIIAEGIPEALTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILA 61 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 ++R GSV +SRSG ++ E S+ G V IGGD G+ F+D + + Sbjct: 62 SKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTP 121 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVI 261 + IV++GEIGG+ E + + +K+ KP+V + G A GHAGA Sbjct: 122 GVKMIVVLGEIGGTEEYKICRGIKEGRI---TKPVVCWCIGTCATMFSSEVQFGHAGACA 178 Query: 262 SGGKGGA 268 + A Sbjct: 179 NQASETA 185 >gi|70938995|ref|XP_740099.1| succinyl-CoA synthetase alpha subunit [Plasmodium chabaudi chabaudi] gi|56517575|emb|CAH77250.1| succinyl-CoA synthetase alpha subunit, putative [Plasmodium chabaudi chabaudi] Length = 147 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 76/136 (55%), Positives = 92/136 (67%), Gaps = 4/136 (2%) Query: 14 QGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--GNVNVPVFTTVAEAKERTAA 71 Q + G+FHT +A+ Y T++VGG++P K + WT +PVF +V EAKE+T Sbjct: 12 QYFSLFQGSFHTTEALKY-GTKMVGGVNPSKKGSTWTSIDNKYTLPVFGSVLEAKEKTNC 70 Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS-SSRLIGPNCP 130 ASVIYVP A +AIIESIEAEIPLIVCITEGI DM+ VKA L S SRLIGPNCP Sbjct: 71 YASVIYVPHQHAKNAIIESIEAEIPLIVCITEGICQHDMLEVKACLNMSNKSRLIGPNCP 130 Query: 131 GILTPDSCKIGIMPGS 146 GI+ P KIGI+P Sbjct: 131 GIIKPGESKIGILPSH 146 >gi|291614007|ref|YP_003524164.1| CoA-binding domain protein [Sideroxydans lithotrophicus ES-1] gi|291584119|gb|ADE11777.1| CoA-binding domain protein [Sideroxydans lithotrophicus ES-1] Length = 896 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 96/245 (39%), Gaps = 19/245 (7%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVR 112 + ++AE + VI PP I E + V IT G + + Sbjct: 60 YASIAEILQ--PVELVVIATPPQTVPGIIEECGIHGVKAAVIITAGFGEVGSEGASLERQ 117 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + ++ + RLIGPNC GI+ P + G++ ++S+SG L + ++ Sbjct: 118 LLENAQRYNIRLIGPNCLGIMRPSIGLNATFNKGVANNGNIALISQSGALCTAILDWANR 177 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 +G S+ V +G +F ++L+ ++D T SI+M E A F+ Sbjct: 178 NDVGFSSVVSMGSS--TDVDFGEILDYLVSDPNTRSILMYIE----GVRNARSFMSALRA 231 Query: 233 RGRKKPIVGFVAGKT-APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 R KP++ G+ A M H +++ G + A G+ + ++ Sbjct: 232 AARIKPVILVKVGRHPAGSKAAMSHTASLV----GADDVFDAAFSRVGVVRVQTVTQLFT 287 Query: 292 SLVEL 296 + L Sbjct: 288 AARAL 292 >gi|85858298|ref|YP_460500.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein [Syntrophus aciditrophicus SB] gi|85721389|gb|ABC76332.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein [Syntrophus aciditrophicus SB] Length = 899 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 59/304 (19%), Positives = 109/304 (35%), Gaps = 32/304 (10%) Query: 1 MSIL---VDKNTKVLVQGL---TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNV 54 M+IL D T L+ G TG G + ++ ++P++ + Sbjct: 1 MAILSSVFDPKTIALI-GASDRTGSVGRLLLTNLLSSKDRKIF-PVNPRR------STLL 52 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 N + + E + +VI P G D + + A + V I+ G + Sbjct: 53 NRACYPDIRGIPEH--VDLAVIATPAEGVPDVVEQCGRAGVDGAVIISAGFKETGAGGLL 110 Query: 115 ARLE------KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R++GPNC G + PD + G++ +S S +L + Sbjct: 111 RERRISDIRQRYGMRILGPNCLGFIRPDVGLNTTFIENTPPPGNIAFISESASLGSAILN 170 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 +G S +G + F D+++ D T+SI++ E G+ A +F+ Sbjct: 171 WAIDAHVGFSMFASLGS--MIDIGFGDLIDFLSDDWNTKSILIYMEGVGN----ARKFMS 224 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 +KPIV G+ + + A + G E A K G+ A Sbjct: 225 AARAFALRKPIVVLKPGRLTEMTKAAKYTDAAV-GNDAIYE---AAFKRVGVIRVKDIAG 280 Query: 289 IGRS 292 + ++ Sbjct: 281 LFQA 284 >gi|218778877|ref|YP_002430195.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760261|gb|ACL02727.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Desulfatibacillum alkenivorans AK-01] Length = 726 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 110/290 (37%), Gaps = 30/290 (10%) Query: 13 VQGLTGKAGTF---HTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT 69 V G T + G+ I T V+ ++P+ V + T+ + + Sbjct: 16 VIGATDRIGSVGRAVVTNIIEGGFTGVLYPVNPR------ARSVVANRAYPTIKDIPD-- 67 Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSR 123 + +V+ VP D + ++ E +V IT G + +KA +++ R Sbjct: 68 DVDMAVVIVPAPMVVDVVEQAAEKGASGVVVITAGFKEVGGEGVKLENELKAVVKERGIR 127 Query: 124 LIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 LIGPNC GI+ P ++ G++G +S+SG + + +G S + Sbjct: 128 LIGPNCLGIINTAPGFSMNASFAQAMPAPGNIGFISQSGAMCTAVLDLAMGRNIGFSKFI 187 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE--EAAQFLKDEAKRGRKKPI 239 G ID+LE D T+ I+M E + + A+ + KKP+ Sbjct: 188 SFGNKA--DVSEIDLLEYLGQDPDTDVILMYLEDITDGRKFMDVARKITW----KYKKPM 241 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + +G++ + + ++G + +++GI + Sbjct: 242 LAIKSGRSEEGAKAVSSHTGSLAGSDASYD---AIFQQSGIQRVEDVNEM 288 >gi|332527130|ref|ZP_08403209.1| GCN5-like N-acetyltransferase [Rubrivivax benzoatilyticus JA2] gi|332111560|gb|EGJ11542.1| GCN5-like N-acetyltransferase [Rubrivivax benzoatilyticus JA2] Length = 874 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 89/229 (38%), Gaps = 11/229 (4%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + A+ ++I +PP A+ + ++ G+P+ + ++ L+G Sbjct: 63 AASRADLALIALPPEQIPAALEIVGRIRCRAALIVSSGLPLEACSELHQVAKRYGVHLLG 122 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN G P G + G +G++S+SG LT + G+G S + +G Sbjct: 123 PNSMGFQRPSLKLNASALGPLAAPGPLGLISQSGALTASILDWARHNGIGFSNVISLG-- 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P + L+ D T+SI++ E A +F+ KP+V AG+ Sbjct: 181 PNTAVDLPQALDFLANDGQTQSILVYME----GIRHARRFMSALRAAAYAKPVVVMKAGR 236 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLV 294 HA S GA+D A++ AG+ + ++ + Sbjct: 237 KPAG----SHAALTHSASIVGADDVFDAALRRAGVVRVRTFVQLFSAAK 281 >gi|224367793|ref|YP_002601956.1| SucD1 [Desulfobacterium autotrophicum HRM2] gi|223690509|gb|ACN13792.1| SucD1 [Desulfobacterium autotrophicum HRM2] Length = 716 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 112/281 (39%), Gaps = 24/281 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + T ++ ++P + V + T+ + ++I Sbjct: 23 GKVGHDIFANILKGGYTGMLFPVNPGSK------SILCVRAYNTIMDI--EDPVELAIII 74 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPG 131 +PP A ++ ++IE + IV ++ G ++ A + + RL+GPNC G Sbjct: 75 LPPKLALTSVAQAIEKGVKGIVIVSAGFREVGGEGAEMEDKLIAMCKAAGVRLVGPNCLG 134 Query: 132 ILTP--DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 ++ P + + G + +S+SG L + + G S + IG Sbjct: 135 VINPLAGVRMNASFSARMPQAGHISFISQSGALCTAVLDFAANRDFGFSKFISIGNKA-- 192 Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP 249 + +D+L D T+ I++ E G E Q +K+ R PI+ +G+T+ Sbjct: 193 DVDELDLLRYLHEDMDTDVIMIYQEALGRGPE-FIQAVKEITSGSRPTPILAIKSGRTSA 251 Query: 250 PGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 + A A +G G+E +A +++GI + + Sbjct: 252 GAK----AAASHTGSLAGSEAVYDAIFEQSGIIRVDTIDEL 288 >gi|47198820|emb|CAF88047.1| unnamed protein product [Tetraodon nigroviridis] Length = 328 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 90/242 (37%), Gaps = 57/242 (23%) Query: 43 KKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCIT 102 K YW + +PV+ ++EA ++ +I I I Sbjct: 109 HKQKFYWGHKEILIPVYKNMSEAMKKHP-----------------------DIHTIAIIA 145 Query: 103 EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVG 154 EGIP ++ ++ +IGP G + P KIG I+ ++R GSV Sbjct: 146 EGIPEAFTRKIIKAADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVA 205 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVG- 213 +SRSG ++ E S+ G V IGGD G+ F D + + E IV++G Sbjct: 206 YVSRSGGMSNELNNIISRTTDGVFEGVAIGGDRYPGSVFTDHVLRYQDTPGVEMIVVLGE 265 Query: 214 ----------------------EIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +IGG+ E + + ++ KP+V + G A Sbjct: 266 VSNRQHADPCCFSLPDTHSVWVQIGGTEEYKICEAIQRGRI---TKPVVCWCIGTCATMF 322 Query: 252 RT 253 + Sbjct: 323 SS 324 >gi|809679|emb|CAA33792.1| unnamed protein product [Escherichia coli] Length = 117 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 67/121 (55%), Positives = 89/121 (73%), Gaps = 4/121 (3%) Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 ST VGIGGDP+ G+ FID+LE+F D TE+IVM+GEIGGSAEEEAA ++K+ K Sbjct: 1 STCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHV----TK 56 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 P+VG++AG TAP G+ MGHAGA+I+GGKG A++K A++ AG+ S A IG +L +L Sbjct: 57 PVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 116 Query: 298 G 298 Sbjct: 117 K 117 >gi|298675798|ref|YP_003727548.1| acetyl coenzyme A synthetase [Methanohalobium evestigatum Z-7303] gi|298288786|gb|ADI74752.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanohalobium evestigatum Z-7303] Length = 697 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 89/226 (39%), Gaps = 15/226 (6%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSR 123 + +VI +P + I + A + ++ I+ G + K K R Sbjct: 64 NIDLAVIVIPARFVPETIDKCGRAGVKSVIVISAGFKEAGVEGAKLERESVETARKYGIR 123 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPNC G++ S + KG++G++S+SG + + + +G S + + Sbjct: 124 MLGPNCLGLIDTTSNLNASFASFMAHKGNIGLMSQSGAICTSTLDWADKNRVGFSKFISL 183 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G D L+ D++T I E + +F+ + KP+V Sbjct: 184 GNKA--DLSENDFLQELCNDDSTAVIAAYLE----GVKNGPEFIDIARRVTSIKPVVMVK 237 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +G+T+ R + ++G E A +++GI A S + Sbjct: 238 SGRTSAGSRAVSSHTGTLAGSD---EAYNAAFRQSGIIRADSLQEM 280 >gi|112490214|pdb|2CSU|A Chain A, Crystal Structure Of Ph0766 From Pyrococcus Horikoshii Ot3 gi|112490215|pdb|2CSU|B Chain B, Crystal Structure Of Ph0766 From Pyrococcus Horikoshii Ot3 Length = 457 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 103/257 (40%), Gaps = 21/257 (8%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPL 97 G ++P V + +V + + + ++I VP D +I+ E + Sbjct: 37 GKVYPVNIKEE---EVQGVKAYKSVKDIPDE--IDLAIIVVPKRFVKDTLIQCGEKGVKG 91 Query: 98 IVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 +V IT G + + K R+IGPNC GI ++ +KG Sbjct: 92 VVIITAGFGETGEEGKREEKELVEIAHKYGXRIIGPNCVGIXNTHVDLNATF-ITVAKKG 150 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 +V +S+SG L V++T +E +G S + +G +F ++ E E ++I + Sbjct: 151 NVAFISQSGALGAGIVYKTIKEDIGFSKFISVGNXA--DVDFAELXEYLADTEEDKAIAL 208 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDK 271 E +F + + +KKPI+ AGK+ R ++G E Sbjct: 209 YIE----GVRNGKKFXEVAKRVTKKKPIIALKAGKSESGARAASSHTGSLAGSWKIYE-- 262 Query: 272 INAMKEAGICIAPSPAR 288 A K++G+ +A + Sbjct: 263 -AAFKQSGVLVANTIDE 278 >gi|74318042|ref|YP_315782.1| long-chain fatty-acid-CoA ligase [Thiobacillus denitrificans ATCC 25259] gi|74057537|gb|AAZ97977.1| long-chain fatty-acid-CoA ligase [Thiobacillus denitrificans ATCC 25259] Length = 892 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 109/301 (36%), Gaps = 25/301 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 L + ++ V V G + + + G ++P G + + Sbjct: 9 LFNASS-VAVFGASEREDSVAGTLFRNLRHAGYKGEVYPINPKHAEIFGER---CYARAS 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKARL 117 E ++I P + + E + I + ++ G ++ Sbjct: 65 ELPA--TPELALIATPATTVAAILEECGQRGIRHAIVLSAGFAETGTQGIELEAGLQRVA 122 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 ++ R IGPNC GI P + G + ++S+SG L + G+G Sbjct: 123 KQHGIRFIGPNCLGIQRPAIGLNATFSQGATQAGDLALVSQSGALCTAMLDWAEANGIGF 182 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S+ V G +F ++L+ D T+ I++ E +A +F+ R K Sbjct: 183 SSVVSTGASA--DLDFGEILDYLAYDRQTKGILLYIE----GIRDARRFMSALRATSRFK 236 Query: 238 PIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAM-KEAGICIAPSPARIGRSLVE 295 PIV G+ R + H GA++ G++ +A+ + AG+ + ++ S Sbjct: 237 PIVMVKVGRHEAGSRAVQSHTGALV-----GSDAVFDALVRRAGVVRVNTILQLFASARA 291 Query: 296 L 296 L Sbjct: 292 L 292 >gi|296242464|ref|YP_003649951.1| branched-chain acyl-CoA synthetase subunit alpha [Thermosphaera aggregans DSM 11486] gi|296095048|gb|ADG90999.1| branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit ;acetyl-CoA synthetase (ADP-forming) alpha subunit [Thermosphaera aggregans DSM 11486] Length = 456 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 100/276 (36%), Gaps = 19/276 (6%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + Y + + ++P + + + +++ + + +VI Sbjct: 21 GKIGHVVLKNIKFYGYSGKIYPVNPN------ADEILGLKAYPSISSIPDE--VDVAVIT 72 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----RVKARLEKSSSRLIGPNCPGIL 133 VP I E + + V IT G + V ++ K R++GPN G Sbjct: 73 VPAQEVPPVIEECARKGVKVAVVITAGFSEVGNVEVEEKMVETARKYGMRILGPNIFGYA 132 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 KG++ +++SG L + T +G S V +G + + Sbjct: 133 YTPLNINATFGPLELSKGNIAFITQSGALGIALMGWTIMNEIGLSALVSVGN--MADLDV 190 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 I++ E D T+ I + E +F++ K RKKP++ AG+T Sbjct: 191 IELSEYLADDPHTKVITIYLEGLKPG--YGREFVERMRKVTRKKPVIVIKAGRTQRGASA 248 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 ++G E A K+AGI + + Sbjct: 249 AASHTGSLAGSDSLYE---AAFKQAGIIRTYTVEDM 281 >gi|206889843|ref|YP_002249397.1| acetyl-CoA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206890566|ref|YP_002249447.1| acetyl-CoA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741781|gb|ACI20838.1| acetyl-CoA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742504|gb|ACI21561.1| acetyl-CoA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 695 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 100/270 (37%), Gaps = 23/270 (8%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 ++ T + ++P + +++P + +V+ +R + ++I +P D++ Sbjct: 31 LINGYTGKIYPVNPGR------TEILSLPCYPSVSAIPDR--VDLAIIVIPAKAVADSLK 82 Query: 89 ESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGI 142 + +A + +V IT G + + + +++GPNC G++ + Sbjct: 83 DCAKAGVKGVVVITAGFKEVGGDGVAREKEIVEIVRSAGIKMVGPNCLGVMNTKNKMNAS 142 Query: 143 MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA 202 + +G V S+SG L + + G S V G D LE F Sbjct: 143 FAAELPPEGRVAFFSQSGALGVAIIDWAIENNFGFSKFVSFGNKA--DLNETDFLEYFAK 200 Query: 203 DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 D T+ I+ E + +F++ + + KP++ +G T R ++ Sbjct: 201 DPDTDVILGYIEDV----IDGKRFIEIAKEVTKIKPVILIKSGATEAGARAASSHTGALA 256 Query: 263 GGKGGAEDKINAMKEAGICIAPSPARIGRS 292 G A ++ GI + + Sbjct: 257 GSD---RAFTEAFRKTGIIRTSGIQELFDT 283 >gi|9502268|gb|AAF88064.1|AF286346_1 acetyl-CoA synthetase [Entamoeba histolytica] Length = 713 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 15/233 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------AR 116 K + +VI +P IE EA + ++ IT G K A Sbjct: 58 KIGKIEEKVDLAVIAIPAKFVPGVCIECGEAGVKGLIIITAGFAEAGEEGKKMCIEIQAT 117 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 +K + R+IGPNC GI+ P + G V +S+SG L + + + +G Sbjct: 118 CQKYNMRMIGPNCLGIINPRDGVNASFASVMPEAGGVAFISQSGALCTAILDWAANQHVG 177 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S V IG T++ D+ E F D SI+M E + ++A +F+ + Sbjct: 178 FSYFVSIGSS--IDTDYADLFEFFAKDPKVTSILMYIE----SIKDAKKFVLRAREFAAD 231 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KPI+ AGK++ ++G + + G S + Sbjct: 232 KPIILLKAGKSSEGAAAAMSHTGSLAGNDAVYDAVFD---RCGCIRVDSICDL 281 >gi|67481881|ref|XP_656290.1| acetyl-CoA synthetase [Entamoeba histolytica HM-1:IMSS] gi|56473479|gb|EAL50904.1| acetyl-CoA synthetase, putative [Entamoeba histolytica HM-1:IMSS] Length = 713 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 109/292 (37%), Gaps = 22/292 (7%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 L + + V V G + + + + G ++P G + + Sbjct: 6 LFNPKS-VAVIGASDRKESVGYAVMNNMIKGGYKGNLYPVGRKPELFGKKC----YAKIG 60 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARL 117 + +E+ + +VI +P IE EA + ++ IT G K A Sbjct: 61 QIEEK--VDLAVIAIPAKFVPGVCIECGEAGVKGLIIITAGFAEAGEEGKKMCIEIQATC 118 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +K + R+IGPNC GI+ P + G V +S+SG L + + + +G Sbjct: 119 QKYNMRMIGPNCLGIINPRDGVNASFASVMPEAGGVAFISQSGALCTAILDWAANQHVGF 178 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V IG T++ D+ E F D SI+M E + ++A +F+ + K Sbjct: 179 SYFVSIGSS--IDTDYADLFEFFAKDPKVTSILMYIE----SIKDAKKFVLRAREFAADK 232 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 PI+ AGK++ ++G + + G S + Sbjct: 233 PIILLKAGKSSEGAAAAMSHTGSLAGNDAVYDAVFD---RCGCIRVDSICDL 281 >gi|92113219|ref|YP_573147.1| GCN5-related N-acetyltransferase [Chromohalobacter salexigens DSM 3043] gi|91796309|gb|ABE58448.1| GCN5-related N-acetyltransferase [Chromohalobacter salexigens DSM 3043] Length = 893 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 87/229 (37%), Gaps = 16/229 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-----PVLDMVR--VKARLEKSSSR 123 + ++I P I E E V I+ G P ++ + + R Sbjct: 70 PDLAIIATPAESVPGLIRELGERGCRAAVVISAGFGEGARPEGMALKQAMLDAAKPYLMR 129 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPNC GIL P KG V +++SG + + S G+G S V + Sbjct: 130 IVGPNCLGILAPHMGINASFAHLTPAKGDVAFVTQSGAVATSILDWASARGIGFSHVVSL 189 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G + +F D+L+ D T SI++ E A E +FL R KP+V Sbjct: 190 G--AMSDVDFGDMLDYLALDPKTRSILLYVE----AVTEVRKFLSAARMASRNKPVVVVK 243 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 G++ + ++G + A + AG+ + + ++ Sbjct: 244 TGRSTAGAKAALSHTGALAGADAVYD---AAFRRAGMLRVATLDELFQA 289 >gi|261886031|ref|ZP_06010070.1| succinyl-CoA synthetase, alpha subunit [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 153 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 70/158 (44%), Positives = 97/158 (61%), Gaps = 7/158 (4%) Query: 143 MPGSIFRKGS--VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 MP +F++ +G++S+SG+LTYE Q G G STAVGIG D V G + ++L +F Sbjct: 1 MPAMVFKRAGVYIGLISKSGSLTYEGANQILSAGYGISTAVGIGVDSVIGLTYSELLPMF 60 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAV 260 +IVM+GEIGGS EA +K KKP+V F+AG++AP G+ MGHAGA+ Sbjct: 61 ENGPDATAIVMIGEIGGSLGIEACSIIK-----NMKKPVVAFIAGQSAPKGKRMGHAGAI 115 Query: 261 ISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ISG A K+ A+ AG + SPA IG+ + EL+G Sbjct: 116 ISGEDSSAAGKMKALSAAGAHVVASPAHIGKKIKELIG 153 >gi|12621910|gb|AAB94002.2| succinyl-CoA synthetase [Sus scrofa] Length = 102 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 72/102 (70%), Positives = 83/102 (81%), Gaps = 1/102 (0%) Query: 91 IEAEIPLIVCITEGIPVLDMVRVKARL-EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 I+AE+PL+VCITEGIP DMVRVK RL + +RLIGPNCPG++ P CKIGIMPG I + Sbjct: 1 IDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRLIGPNCPGVINPGECKIGIMPGHIHK 60 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 KG +GI+SRSGTLTYEAV QT+Q GLGQS VGIGGDP GT Sbjct: 61 KGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGT 102 >gi|18313937|ref|NP_560604.1| hypothetical protein PAE3250 [Pyrobaculum aerophilum str. IM2] gi|18161508|gb|AAL64786.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2] Length = 461 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 65/307 (21%), Positives = 117/307 (38%), Gaps = 20/307 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGST-YWTGGNVNVPVF 59 +S L+D + V V G + K G+ + + G ++P + + Sbjct: 2 LSKLIDPQS-VAVIGASAKQGSV-GYVILENLVNRFQGSVYPVNPKYDEAELWGRKLKFY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----RVKA 115 ++ E +E + +VI P + E+ + + I+ G V+A Sbjct: 60 KSILEIQEA--VDVAVIATPAPTVPKVLEEAGRKGVSAAIIISSGFAEAGNAELENWVRA 117 Query: 116 RLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + R++GPNC GI D+ + G + ++S+SG + + + Sbjct: 118 VARQYGIRVLGPNCIGIYNAYSNFDTVFLPADRAGRPPPGPLALISQSGAVAAAIMDWAA 177 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + LG G I++LE F D+ + I + E E A +FL+ Sbjct: 178 RRRLGLGFMANYGNKA--DVTEIELLEAFANDDRVKVITVYIEGFKYFGE-ARRFLETAR 234 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 K KKPIV + AG+ + R + A ++ G E K+AGI A S + Sbjct: 235 KVAVKKPIVAYKAGRGSAAQRAVRSHTAAMA---GTYEMYHGLFKQAGIIEASSVREMFD 291 Query: 292 SLVELLG 298 + + L Sbjct: 292 -MAKALA 297 >gi|320354363|ref|YP_004195702.1| CoA-binding domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320122865|gb|ADW18411.1| CoA-binding domain protein [Desulfobulbus propionicus DSM 2032] Length = 701 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 95/246 (38%), Gaps = 17/246 (6%) Query: 50 TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 G + V+ T+A+ + VI VP A E+++ + IV + G Sbjct: 47 GGELFGLKVYPTIADYP--HPVDLVVIAVPAEMVPAAAREAVKKKAGAIVVVASGFKETG 104 Query: 110 MVRVK------ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLT 163 K + RL+GPNC GI+ I ++G + I S+SG L Sbjct: 105 PHGRKLEEELTEICRRGGVRLLGPNCLGIINTAIKLNASFSKRIPQRGHLAIFSQSGALC 164 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 + + LG S ++ IG +DVL D+ T+ IV E + Sbjct: 165 TAMMDIADERELGVSKSISIGNKA--DITEVDVLAALAQDDETKVIVGYLEDIS----DG 218 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 +F+K + +KP+V AG T + + V++G A K AGIC A Sbjct: 219 DKFVKAAQEASSRKPVVILKAGTTVAGTKAAANHTGVLAGKDTAYG---AAFKRAGICRA 275 Query: 284 PSPARI 289 S + Sbjct: 276 DSFEAL 281 >gi|302343107|ref|YP_003807636.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075] gi|301639720|gb|ADK85042.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075] Length = 489 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 106/260 (40%), Gaps = 29/260 (11%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 IHPK + + +T + + + + +++ +P GD + + + Sbjct: 50 PIHPK------ESTVLGLTAYTAIDQTPQAP--DLAILVLPTKIVGDVLEQCGRRGVKNA 101 Query: 99 VCITEGI----PVLDMVRVK--ARLEKSSSRLIGPNCPGILTPDSCKIGIMP-GSIFRKG 151 V ++ G P ++ + E+ R +GPNC G+ P CKI P G Sbjct: 102 VVVSGGFQESGPEGAAMQERLMRIAEQYGMRFLGPNCLGVANPH-CKINTTPLPYECGPG 160 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 +G+ S+SG+ + Q + LG STA+ +G + + +D LE D T+ I M Sbjct: 161 FIGLASQSGSFVTQMYDQLRRLSLGFSTALSVGNEAN--VDLVDCLEYLGDDPHTKVIGM 218 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDK 271 E +F++ + KKPIV F G G G A+ G DK Sbjct: 219 YVETI----RRGRRFVEVARRVALKKPIVAFYVG-----GSETGRRAALSHTGALAGPDK 269 Query: 272 IN--AMKEAGICIAPSPARI 289 + +++AG+ A + + Sbjct: 270 LYDGILRQAGVIRAQTITEL 289 >gi|301632056|ref|XP_002945107.1| PREDICTED: uncharacterized protein yfiQ-like [Xenopus (Silurana) tropicalis] Length = 900 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 93/224 (41%), Gaps = 11/224 (4%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 ++T A+ ++I +PP+ A+ + + ++ GI +++ + + L+G Sbjct: 65 KQTRADLAIIALPPAEQAAALEVAGHLHCRAALIVSSGIEAQQAAQLQRIARRENVHLLG 124 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN GI P G + GS+ ++S+SG LT + + G+G S+ + +G Sbjct: 125 PNSLGIQRPSLQLNASTVGPLAHAGSMALVSQSGALTAATLDWANGNGVGFSSVISVGPH 184 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 G + L+ D T SI + E + A +F+ KP+V +G+ Sbjct: 185 ASIGLT--EALDFLANDPHTHSIAVCMEGISN----ARRFMSALRSAAHSKPVVVLKSGR 238 Query: 247 T-APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 A + H+ ++ G + A++ AG S + Sbjct: 239 RSAGSAAALTHSATIV----GSDDVFDAALRRAGAVRVHSFVEL 278 >gi|307352932|ref|YP_003893983.1| CoA-binding domain-containing protein [Methanoplanus petrolearius DSM 11571] gi|307156165|gb|ADN35545.1| CoA-binding domain protein [Methanoplanus petrolearius DSM 11571] Length = 702 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 62/278 (22%), Positives = 103/278 (37%), Gaps = 27/278 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK GT E+ + ++P + +V + + + +VI Sbjct: 269 GKVGTTMAEKLAKFPGEFY--PVNP------TDDEIFGFKCYPSVMDIP--GSVDMAVIS 318 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPG 131 VP E E + + V I+ G K +K R++GPNC G Sbjct: 319 VPAPLVPGIAKECGEKGVKIAVIISAGFRETGEEGAKIEDIIAETGKKYGMRIVGPNCLG 378 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 +++P G++ +S+SG L + + GLG S +G Sbjct: 379 LISPYKGYDTTFLPITPLPGNIAFISQSGALLNAVIDWSLSYGLGYSLVASVGNQ--CDL 436 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D L +DE T +I+M E G + +F++ ++ +KP+V AG + Sbjct: 437 KFTDYLVWAQSDENTRAIIMYIEDVG----DGRRFMELVSEISPEKPVVVIKAGSSDKGH 492 Query: 252 -RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 H G++ G E I A KE G A S Sbjct: 493 LAAASHTGSLA----GSHEIYIEAFKECGAISASSIED 526 >gi|169831058|ref|YP_001717040.1| ATP-grasp domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169637902|gb|ACA59408.1| ATP-grasp domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 700 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 111/300 (37%), Gaps = 25/300 (8%) Query: 1 MSILVDKNTKVLVQ--GLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPV 58 +S L + + ++ G GK G + I + I+P+ P Sbjct: 4 LSALFNPASVAIIGASGKPGKIGNIILKNVISSGYGGQIIPINPR------EKEIEGYPA 57 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVR 112 + +V E + +VI VP +G + E A + +V I+ G Sbjct: 58 YASVTEVP--GSVEVAVIAVPAAGVLPVVEECGRAGVKHLVVISAGFKETGAEGLEREKE 115 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + A KS R++GPN GI+ + +G + +S+SG + + + Sbjct: 116 LVATARKSGMRVVGPNSVGIMDTHTPLNASFAAGFPGRGEITFISQSGAMLVAILDWSLI 175 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLG S + +G D + D T+ I+ E + +FL+ ++ Sbjct: 176 TGLGFSKFISLGNK--SDLNEADFIAAVADDPTTKVILCYIEDVA----DGLRFLEVSSQ 229 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 RKKPIV +G + + ++G E A ++AG+ P+ A + Sbjct: 230 VCRKKPIVVLKSGTSQAGAQAASSHTGALAGIDLAYEV---AFRQAGVIRVPTMAELFDL 286 >gi|126465359|ref|YP_001040468.1| acetyl-CoA synthetase (ADP-forming) alpha subunit / branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit [Staphylothermus marinus F1] gi|126014182|gb|ABN69560.1| acetyl-CoA synthetase (ADP-forming) alpha subunit / branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit [Staphylothermus marinus F1] Length = 467 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 110/277 (39%), Gaps = 21/277 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + I Y + I+PK + + +V E + + ++I Sbjct: 26 GKIGHTIMKNIIEYGYKGKIYPINPK------ADEILGYKAYKSVVEVPDE--IDMAIIV 77 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGPNCPGIL 133 VP E + + ++V IT G + V + +L + R++GPN GI Sbjct: 78 VPEQVVPKVAEECGKKGVKVLVVITSGFSEVGNVEAERKLVEIARRYGMRILGPNIFGIA 137 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 + +G + +++SG L + T E +G S V +G + + Sbjct: 138 YTPAKLNATFGPKDVLEGPIAFITQSGALGIALMGWTIMEEIGISALVSMGN--MADIDV 195 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 IDV + D T+ I + E +F+++ K KKP++ AG++ + Sbjct: 196 IDVSKYLANDPNTKVITIYLEGLKPG--TGRKFIEEMKKVTVKKPVIVIKAGRS----KR 249 Query: 254 MGHAGAVISGGKGGAED-KINAMKEAGICIAPSPARI 289 A A +G G+++ A K+AGI A + + Sbjct: 250 GAAAAASHTGSLAGSDNLYQAAFKQAGIIRAYTTEEM 286 >gi|296156217|ref|ZP_06839056.1| GCN5-related N-acetyltransferase [Burkholderia sp. Ch1-1] gi|295893723|gb|EFG73502.1| GCN5-related N-acetyltransferase [Burkholderia sp. Ch1-1] Length = 892 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 11/229 (4%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + A+ +VI +P A+ + + + I+ G+ + A K +L+G Sbjct: 63 AHSRADLAVIALPDDELPSALEVAGRIQCQAALIISTGVDQAHAKDLHAIARKHGIQLLG 122 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNC G P + G + ++G + ++S+SG LT + + +G ST V +G Sbjct: 123 PNCLGYQRPRLNINVGVVGPLAQQGPLALVSQSGALTSSILDWADKNAVGFSTVVSLG-- 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P + L+ D AT SIV+ E A +FL KP+V AG+ Sbjct: 181 PNTAVDLAQTLDFLATDPATHSIVIYME----GITNARRFLSALRAAAITKPVVVLKAGR 236 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLV 294 A A SG G+++ A++ AG S A++ + Sbjct: 237 KA----AASQAALTHSGNIIGSDEVFDAALRRAGAVRVRSFAQLFSAAK 281 >gi|91778593|ref|YP_553801.1| putative acetyl-CoA synthetase [Burkholderia xenovorans LB400] gi|91691253|gb|ABE34451.1| Putative acetyl-CoA synthetase [Burkholderia xenovorans LB400] Length = 892 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 11/229 (4%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + A+ +VI +P A+ + + + I+ G+ + A K +L+G Sbjct: 63 AHSRADLAVIALPDDELPSALEVAGRIQCQAALIISTGVDQAHAKELHAIARKHGIQLLG 122 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNC G P + G + ++G + ++S+SG LT + + +G ST V +G Sbjct: 123 PNCLGYQRPRLNINVSVVGPLAQQGPLALVSQSGALTASILDWADKNAVGFSTVVSLG-- 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P + L+ D AT SIV+ E A +FL KP+V AG+ Sbjct: 181 PNTAVDLAQTLDFLATDPATHSIVIYME----GITNARRFLSALRAAAITKPVVVLKAGR 236 Query: 247 T-APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 A + H+G +I G E A++ AG S A++ + Sbjct: 237 KSAASQAALTHSGNII----GSDEVFDAALRRAGAVRVKSFAQLFSAAK 281 >gi|240103258|ref|YP_002959567.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA) [Thermococcus gammatolerans EJ3] gi|239910812|gb|ACS33703.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA) [Thermococcus gammatolerans EJ3] Length = 463 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 112/292 (38%), Gaps = 26/292 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA-ANASVI 76 GK G + + Y + ++ KG G VF + + + +VI Sbjct: 25 GKIGYAIMKNLVEYGYEGKIYPVN-IKGVEIKIGNR----VFKSYKSILDVPDEVDMAVI 79 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCP 130 VP + E + + ++ I+ G L K K R++GPN Sbjct: 80 VVPAKFVPQVVEECGKKGVKVLPIISSGFGELGPEGKKIEQQLVETAHKYGMRILGPNIF 139 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G++ + G + ++S+SG L + T E +G S V IG Sbjct: 140 GVVYTPEKLNATFGPTDVMPGKLALISQSGALGIALMGWTILEKVGLSAVVSIGNK--SD 197 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 + D+LE F DE T++I++ E ++ +F++ K + KPIV AG++ Sbjct: 198 IDDADLLEYFETDENTKAILIYME----GVKDGRRFMEVAKKVSKVKPIVIIKAGRSERG 253 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL--VELLGSL 300 + ++G + A K+AGI A + IG + L +L Sbjct: 254 AKAAASHTGSLAGSDKIYD---AAFKQAGIIRALT---IGEAFDYARTLSNL 299 >gi|257053345|ref|YP_003131178.1| CoA-binding domain protein [Halorhabdus utahensis DSM 12940] gi|256692108|gb|ACV12445.1| CoA-binding domain protein [Halorhabdus utahensis DSM 12940] Length = 698 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 110/290 (37%), Gaps = 30/290 (10%) Query: 10 KVLVQGLTGKAGTF---HTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 +V V G T G+ E + + VV ++P G + ++A+ Sbjct: 12 RVAVVGATESEGSVGRAVMENLLDGYEGDVVA-VNPSS--ETVFG----LDCHDSIADV- 63 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL------DMVRVKARLEKS 120 + +++ VPP + E+ EA + + IT G +KA E Sbjct: 64 --GGVDLAIVVVPPQIVNGVLEEAGEAGVRDVAVITAGFGEAGSEGAARERDMKAIAEDH 121 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 L+GPNC G+L+ +G++ +S+SG + S +G + Sbjct: 122 DLNLVGPNCLGVLSTRRNMNATFSPKSAIEGNISFMSQSGAFITAVLDWASDHNVGFNDV 181 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 V +G V + D ++ + D T+ I+ E E F+ + + PIV Sbjct: 182 VSLGNKAV--LDEGDFIDYWGEDPETDVILGYLEDI----ENGRDFIDTAREVTKDTPIV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 +G+T A A +G G+E A +++AG+ A S + Sbjct: 236 AVKSGRTEAGA----SAAASHTGAIAGSERAYEAGLEQAGVLRATSVQEL 281 >gi|309790917|ref|ZP_07685459.1| acetyl coenzyme A synthetase subunit alpha [Oscillochloris trichoides DG6] gi|308227031|gb|EFO80717.1| acetyl coenzyme A synthetase subunit alpha [Oscillochloris trichoides DG6] Length = 696 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 102/265 (38%), Gaps = 20/265 (7%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 G ++P + + + +V E + VI +PP + E + Sbjct: 34 NDYRGVVYP---IHPTATSVLGLSAYPSVLNLPE--TPDLVVIVIPPQQVLAVVDECGQK 88 Query: 94 EIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI 147 + +V IT G + ++ A++++ R+IGPNC GI+ S + Sbjct: 89 GVRGLVVITAGFKEVGGEGKELERQLLAKVQQYGMRMIGPNCLGIIDTVSSLNVSFAALM 148 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 KG + ++S+SG + + + +GLG S V +G + + +L + D ++ Sbjct: 149 PFKGEIALMSQSGAMCTAILDWSKAQGLGFSRFVSLGNKA--DVDEVALLHAWNHDPHSK 206 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 I+ E + F+ + + P++ +G TA R ++G + Sbjct: 207 VILAYLE----GINDGPGFVNAAREVTKNTPVIAIKSGTTAAGTRAASSHTGSLAGSEAA 262 Query: 268 AEDKINAMKEAGICIAPSPARIGRS 292 E A ++GI A + + Sbjct: 263 YE---AAFHQSGILRARTMNELFDL 284 >gi|260220634|emb|CBA28370.1| hypothetical protein Csp_A06930 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 468 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 12/250 (4%) Query: 47 TYWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI 105 +TG + + +T A ++ A+ +VI +PP A+ + V ++ GI Sbjct: 75 QTFTGLLRFLDIHSTGTLADLAQSRADLAVIALPPEDLTAALEIAGRIACKAAVIVSSGI 134 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 + ++ +L+GPN G+ P + G + +G + ++S+SG L Sbjct: 135 SAELAASLAKIAKREGVQLLGPNSLGLQRPQLQLNASLAGPLAHRGPLALVSQSGALASS 194 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + + +G ST V +G P + VL+ D T+SIV+ E +A + Sbjct: 195 MLDWAANNAVGFSTVVSLG--PHTSVDLAHVLDFLANDAQTQSIVVYMEGIS----DARR 248 Query: 226 FLKDEAKRGRKKPIVGFVAG-KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 F+ KP+V AG + A H+GA++ G + A++ AG Sbjct: 249 FMSALRMAANAKPVVVLKAGRRPAGNEAAQTHSGAIV----GSDDVFDAALRRAGAVRVR 304 Query: 285 SPARIGRSLV 294 S + + Sbjct: 305 SFVELFSAAK 314 >gi|51244510|ref|YP_064394.1| acetyl-CoA synthetase [Desulfotalea psychrophila LSv54] gi|50875547|emb|CAG35387.1| probable acetyl-CoA synthetase [Desulfotalea psychrophila LSv54] Length = 701 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 100/247 (40%), Gaps = 19/247 (7%) Query: 50 TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 G + +PV+T++ E KE + ++I V D + +++ IV I G Sbjct: 47 GGTLLGLPVYTSLKEYKESL--DMAIIAVNKDLIIDVVQDALSKRCTTIVAIGAGFKESG 104 Query: 110 ------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLT 163 V ++S +RL+GPNC G + + G + RKG + I S+SG L Sbjct: 105 DEGAMLEQEVLTLCKRSGARLLGPNCLGFINTELKINASFAGPMPRKGGISIFSQSGALA 164 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 + Q Q GLG S + +G D+L F AD +T+ + E Sbjct: 165 TAMLDQAEQRGLGVSKLISVGNKA--DITENDLLSYFAADSSTKVVAGYLENI----VNG 218 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICI 282 FLK RKKP++ +G + ++ H GA G A K AGI Sbjct: 219 NNFLKHATHISRKKPVILLKSGTSEAGQKSATSHTGAFT----GTDTAYGAAFKRAGIVR 274 Query: 283 APSPARI 289 A + + Sbjct: 275 ADNFDDL 281 >gi|319763273|ref|YP_004127210.1| gcn5-related n-acetyltransferase [Alicycliphilus denitrificans BC] gi|330825468|ref|YP_004388771.1| GCN5-like N-acetyltransferase [Alicycliphilus denitrificans K601] gi|317117834|gb|ADV00323.1| GCN5-related N-acetyltransferase [Alicycliphilus denitrificans BC] gi|329310840|gb|AEB85255.1| GCN5-related N-acetyltransferase [Alicycliphilus denitrificans K601] Length = 901 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 100/250 (40%), Gaps = 12/250 (4%) Query: 47 TYWTGGNVNVPVFTTVAEA-KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI 105 +TG + TT A + A+ ++I PP A+ + + ++ G+ Sbjct: 43 QRFTGQLQFFDIHTTGTLADLAQIRADLAIIAQPPQDLPAALDVAGRMNCKSALVLSSGV 102 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 +++ + L+GPN G+ P G + R+GS+ ++ +SG LT Sbjct: 103 DAQLAEQLRKIARREGMHLLGPNSLGLQRPSLQLNASAAGPLAREGSLALVCQSGALTAS 162 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + + +G S+ + +G P + L+ D T+SIV+ E ++A + Sbjct: 163 ILDWAANNAVGFSSVISLG--PHTDVGLSEALDFLANDGRTQSIVVYME----GIQDARR 216 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAP 284 F+ KP+V AG+ P G SG G++D +A ++ AG Sbjct: 217 FMSALRSAAYAKPVVVLKAGRK-PAGNQAAQT---HSGAIVGSDDVFDAVLRRAGAVRVR 272 Query: 285 SPARIGRSLV 294 S + + Sbjct: 273 SFVELFSAAK 282 >gi|86748496|ref|YP_484992.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris HaA2] gi|86571524|gb|ABD06081.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris HaA2] Length = 907 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 97/247 (39%), Gaps = 16/247 (6%) Query: 59 FTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV---K 114 F TV E + VI P I E+ E + + I+ + Sbjct: 57 FKTVRSLGELAFVPDLIVITAPSRTVAKIITEAGERGVAGAIIISAEMGRGQGSYADAAN 116 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 KS RLIGPNC GI+ P S + R+G + ++S+SG + V + + Sbjct: 117 RAARKSGIRLIGPNCLGIMVPGSNLNASFAAHMPRRGHLALISQSGAIAAGMVDWAAVKN 176 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G S V IG + D+L+ + D T +I++ E A +A +F+ Sbjct: 177 IGFSGIVSIGDQ--LDVDIADMLDYYAGDIETRAILLYIE----AVTDARKFMSAARAAA 230 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSL 293 R KP+V +G+ A A A +G GA+ A + AG+ + Sbjct: 231 RVKPVVVVKSGRMAHGAL----AAATHTGALAGADAVYGAAFRRAGMLRVFDLRELFDC- 285 Query: 294 VELLGSL 300 E LG + Sbjct: 286 AETLGRV 292 >gi|254173588|ref|ZP_04880260.1| acetyl coenzyme A synthetase (ADP forming), alpha domain [Thermococcus sp. AM4] gi|214032280|gb|EEB73110.1| acetyl coenzyme A synthetase (ADP forming), alpha domain [Thermococcus sp. AM4] Length = 463 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 106/278 (38%), Gaps = 21/278 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA-ANASVI 76 GK G + + Y + ++ KG G VF + + + +VI Sbjct: 25 GKIGYAIMKNLVEYGYEGKIYPVN-IKGVEIKIGNR----VFKSYKSILDVPDEVDMAVI 79 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCP 130 VP + + + + ++ I+ G L K K R++GPN Sbjct: 80 VVPAKFVPQVVEDCGKKGVKVLPIISSGFGELGPEGKKVEEQLVQIARKYGMRILGPNIF 139 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G++ + G + ++S+SG L + T E +G S V IG Sbjct: 140 GVVYTPEKLNATFGPTDVMPGPLALISQSGALGIALMGWTILEKVGLSAVVSIGNK--SD 197 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 + D+LE F DE T++I++ E ++ +F++ K + KPIV AG++ Sbjct: 198 IDDADLLEYFEVDENTKAILIYME----GVKDGRRFMEVAKKVSKVKPIVVIKAGRSERG 253 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + ++G + A K+AG+ A + Sbjct: 254 AKAAASHTGSLAGSDKIYD---AAFKQAGVIRALTIGE 288 >gi|167383747|ref|XP_001736656.1| hypothetical protein [Entamoeba dispar SAW760] gi|165900837|gb|EDR27069.1| hypothetical protein, conserved [Entamoeba dispar SAW760] Length = 713 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 53/228 (23%), Positives = 88/228 (38%), Gaps = 15/228 (6%) Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSS 121 + +VI +P IE EA + ++ IT G K A +K + Sbjct: 63 EEKVDLAVIAIPAKFVPGVCIECGEAGVKGLIIITAGFAEAGEEGKKMCIEIQATCQKYN 122 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPNC GI+ P + G V +S+SG L + + + +G S V Sbjct: 123 MRMIGPNCLGIINPRDGVNASFASVMPEAGGVAFISQSGALCTAILDWAANQHVGFSYFV 182 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 IG T++ D+ E F D SI+M E + ++A +F+ + KPI+ Sbjct: 183 SIGSS--IDTDYADLFEFFAKDPKVTSILMYIE----SIKDAKKFVLRAREFAADKPIIL 236 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 AGK++ ++G + + G S + Sbjct: 237 LKAGKSSEGAAAAMSHTGSLAGNDAVYDAVFD---RCGCIRVDSICDL 281 >gi|150400008|ref|YP_001323775.1| CoA-binding domain-containing protein [Methanococcus vannielii SB] gi|150012711|gb|ABR55163.1| CoA-binding domain protein [Methanococcus vannielii SB] Length = 706 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 94/247 (38%), Gaps = 16/247 (6%) Query: 52 GNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM- 110 + + ++ ++ + ++ +P DA+ E + I + IT G D Sbjct: 52 EIYGIKCYNSILNIEDA--IDLVILAIPAEYTVDAMEECGKKGIKSAIIITAGFSESDNK 109 Query: 111 ---VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 +++K ++K R IGPNC G++ S + G++ +S+SG + + Sbjct: 110 DLELKLKNVIDKYKIRTIGPNCLGVINLYSNLNASFSKEFSKIGNIAFISQSGAILTALL 169 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 LG S V +G + ++L D T+ I + E +F+ Sbjct: 170 DIAEYSNLGFSKIVSMGNKIDIQED--EILRYLENDPNTKVIALYIEGLKDG-----KFI 222 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 + RKKP++ +G++ + + ++G +E A K++ + Sbjct: 223 SAAKRISRKKPVIVLKSGRSKEGAKAVSSHTGSLAGN---SEVYNAAFKKSRVFNVEGFE 279 Query: 288 RIGRSLV 294 + L Sbjct: 280 DLVNLLK 286 >gi|91773323|ref|YP_566015.1| Acyl-CoA synthetase [Methanococcoides burtonii DSM 6242] gi|91712338|gb|ABE52265.1| Acetyl-CoA synthetase (ADP-forming), alpha and beta subunits [Methanococcoides burtonii DSM 6242] Length = 696 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 115/283 (40%), Gaps = 24/283 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + + +++ I+PK + +P + T+ +A A +V+ Sbjct: 21 GKVGRAVLDNLLESYSGRII-PINPK------ADEILGLPCYPTILDAP--GGAELAVVV 71 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPG 131 VP DA+ + A + +V I+ G + K +++ R++GPNC G Sbjct: 72 VPAVLVPDALEKCGLAGVKNVVVISAGFKEAGIEGSKLERRCAEIVKEHGMRMVGPNCLG 131 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 I+ S S+ +KG++ ++S+SG + + G+G S + +G Sbjct: 132 IIDTASGLNASFAASMAKKGNISMMSQSGAICTSTLDWADARGVGFSKFISLGNKA--DL 189 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 D L DE T I E ++ +F++ K RKKPI+ +G+TA Sbjct: 190 SENDFLLEMEDDENTAVIAAYLE----GVKDGPKFMEIARKVSRKKPIIVIKSGRTAVGS 245 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 R + ++G E A ++ + A S ++ + Sbjct: 246 RAVSSHTGTLAGSD---EAYNAAFSQSNVIRADSVEQLMDLMR 285 >gi|215259799|gb|ACJ64391.1| ATP-citrate synthase [Culex tarsalis] Length = 315 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 6/153 (3%) Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 GSV +SRSG ++ E S G V IGGD GT F+D + + AD + IV Sbjct: 1 GSVAYVSRSGGMSNELNNIISLTTDGVFEGVAIGGDRYPGTTFMDHILRYQADPDAKMIV 60 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGG 267 ++GE+GG E E + L+D KP++ + G A GHAG+ + + Sbjct: 61 LLGEVGGVEEYEVCEALQDGRI---TKPLIAWCIGTCAGMFTSEVQFGHAGSCANSDRET 117 Query: 268 AEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 A K ++ AG + S +G + + L Sbjct: 118 ATAKNKSLAAAGAHVPDSFDTLGDLVGSVYADL 150 >gi|147678085|ref|YP_001212300.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI] gi|146274182|dbj|BAF59931.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI] Length = 700 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 100/274 (36%), Gaps = 23/274 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + I + ++PK +P + ++ A E A ++I Sbjct: 23 GKIGNVIVKNLIKSGYRGKIFPVNPK------EAEIEGIPCYPSIERAPE--PAGLAIIS 74 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKARLEKSSSRLIGPNCPG 131 VP + +A E + + +V I+ G R+ +K R++GPNC G Sbjct: 75 VPAAKVLEAAEECGKTGVKYLVVISAGFKETGKEGLELERRLVETCKKYKMRMLGPNCVG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 + K + +S+SG + + + Q GLG S V +G Sbjct: 135 FMDTHVPINASFAAGFPMKDEIAFISQSGAMVLSILDWSFQAGLGFSKFVSLGNKA--EL 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 ++E D T+ I+ E E FL+ + RKKP++ +G + Sbjct: 193 TEAHLIEDAAEDPYTKVILCYIEDV----ENGPHFLEVARRASRKKPVIILKSGTSQAGA 248 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + ++G E A ++ G+ A S Sbjct: 249 QAASSHTGALAGSDLAYET---AFRQCGVIRARS 279 >gi|14521901|ref|NP_127378.1| succinyl-coa synthetase alpha subunit related protein [Pyrococcus abyssi GE5] gi|5459121|emb|CAB50607.1| acdA-5 acetate--coA ligase (ADP-forming) (EC 6.2.1.13) alpha chain [Pyrococcus abyssi GE5] Length = 466 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 96/255 (37%), Gaps = 21/255 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++ K G G V+ +V E + + +VI VP D I E E + + Sbjct: 45 AVNVKGGEIEVNGKKFK--VYRSVKEIPDE--VDVAVIAVPAKFVPDVIDECGEKGVKGV 100 Query: 99 VCITEGIPVLDMVR----VKARLEKSSSRLIGPNCPGILTPDSCK--IGIMPGSIFRK-- 150 V I+ G + R K R++GPNC G+ ++ P R Sbjct: 101 VVISAGFKEAGRADLEEELVKRARKWGIRVVGPNCLGVTNIENGFDCNFNPPERQARPKF 160 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G + +S+SG + ++ +G S + +G + + D + D T+ I Sbjct: 161 GPIAFMSQSGAFGAAILDWAARHEVGMSKFISLGN--MADLDESDFMLYLKDDPKTKVIT 218 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 E ++ +F + + KP++ AG+T + ++G E Sbjct: 219 AYIE----GVKDGRKFFNAAKETTKVKPVIILKAGRTEAGAKAAASHTGSLAGSYKIYE- 273 Query: 271 KINAMKEAGICIAPS 285 A K++G+ +A S Sbjct: 274 --AAFKQSGVLMAKS 286 >gi|163849442|ref|YP_001637486.1| acetyl coenzyme A synthetase subunit alpha [Chloroflexus aurantiacus J-10-fl] gi|222527446|ref|YP_002571917.1| acetyl coenzyme A synthetase alpha domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163670731|gb|ABY37097.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Chloroflexus aurantiacus J-10-fl] gi|222451325|gb|ACM55591.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Chloroflexus sp. Y-400-fl] Length = 696 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 102/263 (38%), Gaps = 20/263 (7%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P G P V + +V+ +PP A+ E I Sbjct: 36 YQGNIYPIHPRATEVLGLCAYPSVLDVPN-----PIDLAVVVIPPQHVIAAVDECGRKGI 90 Query: 96 PLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 +V IT G + + A + + R+IGPN GI+ S ++ Sbjct: 91 KGLVVITAGFKEVGGAGRELERELLATVRRYGMRMIGPNSLGIIDTISKLNASFANAMPL 150 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 G++ ++S+SG + + + Q+G+G S V +G + + +LE + DE + I Sbjct: 151 PGNIALMSQSGAICTAILDWSHQQGIGFSRFVSLGNK--TDVDEVALLEAWNRDEHSRVI 208 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 + E A ++ F++ + + P+V +G TA R ++G + E Sbjct: 209 LAYLE----AIDDGPGFIRVAREVTKTTPVVAIKSGTTAAGTRAASSHTGSLAGSEAAYE 264 Query: 270 DKINAMKEAGICIAPSPARIGRS 292 A ++GI A + + Sbjct: 265 T---AFAQSGILRARTMNELFDL 284 >gi|294879337|ref|XP_002768651.1| succinyl-CoA synthetase alpha subunit, putative [Perkinsus marinus ATCC 50983] gi|239871349|gb|EER01369.1| succinyl-CoA synthetase alpha subunit, putative [Perkinsus marinus ATCC 50983] Length = 134 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 66/109 (60%), Positives = 81/109 (74%), Gaps = 5/109 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTKV+ QGLTGK GTFHT QAI Y T++VGG++PKK T N+P+F V Sbjct: 30 VWVDKNTKVICQGLTGKQGTFHTAQAIEY-GTKMVGGVNPKKAGTTHN----NLPIFANV 84 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV 111 EA++ T A+ASV+YVPP A A +E+IEAEIPL+VCITEGIP DMV Sbjct: 85 MEARQATGADASVVYVPPFAAASACLEAIEAEIPLLVCITEGIPQHDMV 133 >gi|292491665|ref|YP_003527104.1| CoA-binding protein [Nitrosococcus halophilus Nc4] gi|291580260|gb|ADE14717.1| CoA-binding domain protein [Nitrosococcus halophilus Nc4] Length = 895 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 106/259 (40%), Gaps = 25/259 (9%) Query: 57 PVFTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 P + VA + ++I PP+ I E E V +T G+P Sbjct: 49 PKYKAVAGVLAYPDIASLPETPDLAIIGTPPTTVPGIIAELGERGTKAAVVLTAGLPQTK 108 Query: 110 -------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTL 162 ++ + R++GPNC G++ P G + +G + +S+SG L Sbjct: 109 DEQGQNLQQKMLEAAQPHLLRILGPNCVGLMIPLLGFNGSFAHTQAMEGEIAFVSQSGAL 168 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 T + + +G S + +G +F DVL+ + T +I++ E + +E Sbjct: 169 TTVVLDWAKSKEIGFSYFISMGDSA--DIDFGDVLDYLGGEPNTHAILLYIE----SIKE 222 Query: 223 AAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGIC 281 A +F+ R KP++ +G+ AP G A A +G GA+D A++ AG+ Sbjct: 223 ARKFMSAARAAARNKPVLVVKSGR-APEG---AQAAASHTGALAGADDVYSAAIRRAGML 278 Query: 282 IAPSPARIGRSLVELLGSL 300 + + ++ L +L Sbjct: 279 RVVTIENLFGAVETLARAL 297 >gi|156101812|ref|XP_001616599.1| acetyl CoA synthetase [Plasmodium vivax SaI-1] gi|148805473|gb|EDL46872.1| acetyl CoA synthetase, putative [Plasmodium vivax] Length = 994 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 117/287 (40%), Gaps = 27/287 (9%) Query: 13 VQGLTGKAGTF---HTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT 69 V G T + G+ + + +T + ++ KG + + + TV + E Sbjct: 47 VIGATERPGSVGNSIVKNLMKGDETYRLYFVN-SKGGKVYNRES-----YKTVGDIPEE- 99 Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSR 123 + +VI VP + + + +V +T G K + + R Sbjct: 100 QIDLAVIAVPRDHVLGVMKDLKSKNVKGVVIVTAGFKETGSEGTKLEQQIIDVAKNNGIR 159 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 +IGPNC GI+ + KG+ +LS+SG + A+ + Q +G S + + Sbjct: 160 IIGPNCLGIIHSYHNMNASFADNQILKGNFSLLSQSGAICSAALDLSLQHNIGFSHFISV 219 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G + +F +++E DE T+ I++ E G + +F+ K KPI+ Sbjct: 220 GS--MCDVQFFELVEYLFYDENTKYILLYVESIG----DMNKFVAVCKKVCLYKPIILLK 273 Query: 244 AGKTAPPG-RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +GKTA + H G+++ G E +M++ G+ + + + Sbjct: 274 SGKTAKAAEAAISHTGSMV----GNYEIFYASMRKLGVLVVDNFEEL 316 >gi|220936220|ref|YP_002515119.1| acetyltransferase [Thioalkalivibrio sp. HL-EbGR7] gi|219997530|gb|ACL74132.1| acetyltransferase [Thioalkalivibrio sp. HL-EbGR7] Length = 897 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 90/238 (37%), Gaps = 19/238 (7%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVR 112 + VA +VI P + + EA + + ++ G Sbjct: 60 YPDVAAI--ERPPELAVIATPAETVPGIVRQCGEAGVAGAIVMSAGFAEAGSQGQRLQAA 117 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + ++ RLIGPNC G++ P + G + ++S+SG + + Sbjct: 118 MLEAARETGLRLIGPNCLGVIRPKHKINATFSRNTALPGHLALVSQSGAICTAILDWAED 177 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 + +G S +G +F DVL+ D T SI++ E A +F+ Sbjct: 178 QRIGFSLVASLG--DAADVDFGDVLDFLALDAETHSILLYVE----GIRHARRFMSGLRA 231 Query: 233 RGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 R KP++ AG+ R M H GA++ G + A++ AG A + ++ Sbjct: 232 AARMKPVIVIKAGRHEEGSRAAMSHTGALV----GADDVFDAALERAGAVRAQTVQQL 285 >gi|73748855|ref|YP_308094.1| acetyl-CoA synthetase [Dehalococcoides sp. CBDB1] gi|73660571|emb|CAI83178.1| acetyl-CoA synthetase [Dehalococcoides sp. CBDB1] Length = 891 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 112/298 (37%), Gaps = 30/298 (10%) Query: 3 ILVDKNTKVLVQGLTGKAGT---FHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVF 59 + + + LV G T K G+ + I + V ++P + + + Sbjct: 6 LFFNPKSVALV-GATDKEGSTGKIILQNLIKGKDRRAVYPVNPNR------ESVLEQKCY 58 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRV 113 T+ + E VP I ++ + ++ I+ G + ++ Sbjct: 59 PTLKDLPEVPDLVLV--VVPAKFVPQVIEDAGKVGTKSVIIISAGFKEVGSEGKALEEKI 116 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMP-GSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 ++ R+IGPNC G ++P S + + G+V LS+SG L + Sbjct: 117 AEIAKQYGIRIIGPNCMGTMSPASGFNATFARMEMPKTGNVAFLSQSGALGSAVLDWAIA 176 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 +G S IG + F D+++ F DE T+SI++ E G EA +F+ Sbjct: 177 RNVGFSGFASIGS--MMDVNFGDLIDYFGTDENTKSIIVYLETMG----EAKKFMSAARG 230 Query: 233 RGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 R KPI+ G+ + H G+++ G A + AG+ + + Sbjct: 231 FARTKPIIVIKPGRFEESAQAAKSHTGSMV----GNAMFVDAIFQRAGVVRVDNIGDL 284 >gi|115523752|ref|YP_780663.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris BisA53] gi|115517699|gb|ABJ05683.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris BisA53] Length = 902 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 13/233 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR---LEKSSSRLIGP 127 + VI P I E+ E + V I+ G+ +A K RLIGP Sbjct: 70 PDLIVITAPARTVPAIIAEAAELGVAGAVIISSGLGRGAGSYAEAANRTARKHGLRLIGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 NC G++ P SC + ++G + ++S+SG + V +++ +G S V IG Sbjct: 130 NCLGVIVPGSCLNASFAAHMPKEGHLALISQSGAIAAGMVDWAAEKSIGFSGLVSIGEQ- 188 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + D+L+ F D T +I++ E +A +F+ R KP+V +G+ Sbjct: 189 -LDVDIADLLDHFALDYKTRAILLYVESIT----DARKFMSAARAAARVKPVVVVKSGRM 243 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 A + ++G + A + AG+ + + E LG + Sbjct: 244 AAGAKAAATHTGALAGEDAVYD---AAFRRAGMLRVYNLRELFDC-AETLGRI 292 >gi|290559309|gb|EFD92645.1| CoA-binding domain protein [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 683 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 103/257 (40%), Gaps = 21/257 (8%) Query: 49 WTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV- 107 + + F +VA K++ + +VI VP + + E + +IPL V ++ G Sbjct: 46 FVDELQGLKAFKSVASVKKK--IDIAVIAVPAEMVLNILKECEKVKIPLAVILSAGFNEI 103 Query: 108 -----LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIM--PGSIFRKGSVGILSRSG 160 +K L K+ R+IGPNC GI+ D P S KG+ +S+SG Sbjct: 104 GGDGTKKEEAIKKFLSKAKIRIIGPNCLGIINTDPNFNATFLDPNSKVIKGNASFISQSG 163 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 L V S +G S + IG D++E F DE T+ + + E + Sbjct: 164 ALLSAIVDDASTNDIGFSKIISIGNA--TDISEADIIEAFKTDEKTKVLALYLEGLNNG- 220 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKTAP-PGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 + FLK + R+KP++ GK G H G++ G + A + AG Sbjct: 221 ---SDFLKASMEFSREKPLLILKGGKFKSTSGAVSSHTGSMA----GDYKAYELAFERAG 273 Query: 280 ICIAPSPARIGRSLVEL 296 + + + + Sbjct: 274 AISVDNIDDLFNFMRDA 290 >gi|115761337|ref|XP_001196395.1| PREDICTED: similar to ENSANGP00000012364 [Strongylocentrotus purpuratus] gi|115948420|ref|XP_799305.2| PREDICTED: similar to ENSANGP00000012364 [Strongylocentrotus purpuratus] Length = 588 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 49/227 (21%), Positives = 88/227 (38%), Gaps = 24/227 (10%) Query: 95 IPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPG------ILTPDSCKIGIM----- 143 I I+ + I + + +IGP+ ++ P S + + Sbjct: 333 IRCILMMVGHINEQQTRELIGLASRKRVLMIGPSSFKHGLQVNVIKPGSFRCNLFGDIGG 392 Query: 144 ------PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++R+GSV LSRSG L+ E ++ G + +GG G+ +D + Sbjct: 393 PLPDLVELKLYRQGSVVYLSRSGGLSTELCVSIARNSDGIYMGIALGGGRYTGSGIMDHI 452 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT---- 253 + A + +++GE+GG E E + LK K KP++ F G + Sbjct: 453 RFLQDNHAVKCFILIGEVGGLEEYEVCEALK---KGTITKPVIAFCIGTCTDLYKQEPAY 509 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GH+G + A K A+ +AG + + + L E+ L Sbjct: 510 FGHSGGGTDSERESAMVKNQALAQAGAIVPDTFDSMAVKLAEVYDKL 556 >gi|116749399|ref|YP_846086.1| CoA-binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116698463|gb|ABK17651.1| CoA-binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 712 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 110/287 (38%), Gaps = 19/287 (6%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + K G + + + G ++P + P + + + Sbjct: 13 VAVIGASTKPGKVGHDIFVNILKGNYQGTLYPVNPTAKSIQCVRAYPAISDIPD-----P 67 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRL 124 + +I +PP A A++ES I IV ++ G + K A ++ RL Sbjct: 68 VDLGIIILPPPEALKAVMESARVGIKGIVIVSAGFKEVGGEGRKIEEQITAICREAGMRL 127 Query: 125 IGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +GPNC G++ P + G + +S+SG L + + G S + Sbjct: 128 VGPNCLGVINPHPAVRLNASFSARMPAFGEISFISQSGALCTAVLDFAADRDFGFSKFIS 187 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IG + +D+L F D+ TE I++ E + Q +++ R PI+ Sbjct: 188 IGNKA--DVDELDLLRYFHKDKETEVIMIYLEELRRG-ADFIQEVREMTSGERPTPILVI 244 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +G+T+ ++G +G E +++GI A S + Sbjct: 245 KSGRTSAGAAAAASHTGSLAGSEGIYE---AIFQQSGIIRAESIEEL 288 >gi|332158520|ref|YP_004423799.1| hypothetical protein PNA2_0879 [Pyrococcus sp. NA2] gi|331033983|gb|AEC51795.1| hypothetical protein PNA2_0879 [Pyrococcus sp. NA2] Length = 467 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 96/255 (37%), Gaps = 21/255 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++ K G G V+ ++ + + + +VI VP D I E E + Sbjct: 45 AVNVKGGEIEVNGKKFK--VYKSIKDIPDE--VDVAVIAVPARFVPDVIDECGEKGVKGA 100 Query: 99 VCITEGIPVLDMVR----VKARLEKSSSRLIGPNCPGILTPDSCK--IGIMPGSIFRK-- 150 V I+ G + R +K R++GPNC G+ ++ P R Sbjct: 101 VVISAGFKEAGRADLEEELVKRAKKWGIRVVGPNCLGVTNLENGFDCNFNPPERQARPRF 160 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G + +S+SG + ++ +G S + +G + + D + D T+ I Sbjct: 161 GPIAFMSQSGAFGAAILDWAARHDVGMSKFISLGN--MADLDESDFMLYLKDDPKTKVIT 218 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 E ++ +F + + KP++ AG+T + ++G E Sbjct: 219 AYIE----GVKDGRKFFNVAKETTKVKPVIILKAGRTEAGAKAAASHTGSLAGSYRIYE- 273 Query: 271 KINAMKEAGICIAPS 285 A +++G+ +A S Sbjct: 274 --AAFEQSGVLMAKS 286 >gi|126460459|ref|YP_001056737.1| CoA-binding domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126250180|gb|ABO09271.1| CoA-binding domain protein [Pyrobaculum calidifontis JCM 11548] Length = 472 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 92/239 (38%), Gaps = 18/239 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----RVKARLEKSSSRLI 125 + +VI P + E+ + I V I+ G V VKA ++ RL+ Sbjct: 78 DIDVAVIATPAPTVPKILEEAGQKGIKAAVVISSGFAEAGNVELENWVKAVAKQYGIRLL 137 Query: 126 GPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 GPNC G+ D+ + + G + ++S+SG + + ++ LG V Sbjct: 138 GPNCIGVYNAYTNFDTQFLPVERAGRPPPGPIALISQSGAVATAIMDWAARRRLGMGFVV 197 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G +++LE F DE + I M E E A + L + KKPIV Sbjct: 198 NYGNKA--DVTEVELLEAFAEDERVKVITMYMEGLKYPGE-AKRLLDTVRRIAPKKPIVV 254 Query: 242 FVAGKTAPPGRTM--GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + AG+ + + H A+ G E K+AG A S + + + L Sbjct: 255 YKAGRGSTAAQRAVRSHTAAMA----GTYEMYHGLFKQAGAIEASSVREMFD-MAKALA 308 >gi|170290751|ref|YP_001737567.1| Acyl-CoA synthetase (NDP forming) [Candidatus Korarchaeum cryptofilum OPF8] gi|170174831|gb|ACB07884.1| Acyl-CoA synthetase (NDP forming) [Candidatus Korarchaeum cryptofilum OPF8] Length = 482 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 109/277 (39%), Gaps = 35/277 (12%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P+ +NVP + +V + + ++I P A+ E I Sbjct: 47 AVNPRS-----DEMILNVPTYKSVLDIPDVPE--LAIIVTPAPNTPQALEECGRKGIRNA 99 Query: 99 VCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTP----DSCKIGI------ 142 V I+ G + VK + R+IGPNC G+++P D+ + I Sbjct: 100 VVISGGFAEVGGEGVKLQNMLDEIRRRYGIRVIGPNCVGVISPSTGVDTLFLPIDKEIRG 159 Query: 143 ---MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL 199 + + GSV ++++SG + E +G S V G + +DV+E Sbjct: 160 NSYISSPRPKPGSVALITQSGAFGVACLDYMYGEDIGLSKFVSYGNK--LDVDEVDVIEY 217 Query: 200 FLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGA 259 D T I++ E + E+ +FL+ + R+KPIV AG+T+ R A Sbjct: 218 LKDDPMTRVILVYAE----SIEKGREFLELAREVTREKPIVVLKAGRTSAGARAASSHTA 273 Query: 260 VISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 I+G + A ++AG+ + + L Sbjct: 274 AIAGSDSIYD---AAFRQAGVIRVMDMEELFDAAKAL 307 >gi|92117458|ref|YP_577187.1| GCN5-related N-acetyltransferase [Nitrobacter hamburgensis X14] gi|91800352|gb|ABE62727.1| GCN5-related N-acetyltransferase [Nitrobacter hamburgensis X14] Length = 897 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 89/222 (40%), Gaps = 12/222 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 ++ P + + + E+ + ++ ++ G+ + RLIGP Sbjct: 70 PELVIVTTPAATVPEIVAEAGQLGSAGVIIVSAGLGHGAGSLAEAAERAARAYHMRLIGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 NC GIL P + R G++ ++S+SG + V ++ +G S V +G Sbjct: 130 NCLGILMPTINLNASFAAHMPRAGNLALISQSGAIATGMVDWAARRNVGFSGIVSVGDQ- 188 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + D+LE F D T++I+M E A ++A +F+ R KP+V +G+ Sbjct: 189 -LDVDIADLLEFFALDTDTKAILMYIE----AVKDARKFMSAARAAARVKPVVVVKSGRM 243 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 A + ++G + A + AGI + Sbjct: 244 AQGAKAAATHTGALAGSDAVYD---AAFRRAGILRVFDLREL 282 >gi|317154738|ref|YP_004122786.1| CoA-binding domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316944989|gb|ADU64040.1| CoA-binding domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 700 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 106/287 (36%), Gaps = 27/287 (9%) Query: 4 LVDKNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 L + ++ V V G + GK G + + ++P G + + ++ Sbjct: 10 LFNPDS-VAVIGASRNPGKLGHVVLANLVGAGYRGKLFPVNPA------GGEILGLKTYS 62 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVK 114 + + + +V+ +P + E EA + + IT G +R+ Sbjct: 63 AINRLP--HSPDLAVVVLPRQDVLRTLDELAEARVGAVCVITAGFRETGRDGFELEMRMA 120 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + + L+GPN G++ + + ++ +GS+G S+SG L + EG Sbjct: 121 DLARRKNITLLGPNSLGLINTECGLNATIAQAMPARGSIGFFSQSGALCSAILDWADGEG 180 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G S V +G DVLE D T I+ E E +FL+ Sbjct: 181 VGFSKFVSLGNKAA--LSEADVLEALGDDPDTRVIIGYLESVDDGE----KFLRKARAVT 234 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 KP++ AG T R ++G + A ++AGI Sbjct: 235 GTKPVIMIKAGTTPSGARATSSHTGSMAGSLVAS---TAAFRQAGII 278 >gi|91975831|ref|YP_568490.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris BisB5] gi|91682287|gb|ABE38589.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris BisB5] Length = 907 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 98/247 (39%), Gaps = 16/247 (6%) Query: 59 FTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV---K 114 F TV E + VI P + E+ E + + I+ + Sbjct: 57 FKTVRALAELSFVPDLIVITAPSRTVAKIVAEAGERGVAGAIIISAEMGRGKGSYAEAAN 116 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 KS RLIGPNC GI+ P S + R+G++ ++S+SG + V + + Sbjct: 117 RAARKSGIRLIGPNCLGIMVPSSNLNASFAAHMPRRGNLALISQSGAIAAGMVDWAAVKN 176 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G S V IG + D+L+ + AD T +I++ E A +A +F+ Sbjct: 177 IGFSGIVSIGDQ--LDVDIADMLDFYAADIETRAILLYIE----AVTDARKFMSAARAAA 230 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSL 293 R KP+V +G+ A A +G GA+ A + AG+ + Sbjct: 231 RVKPVVVVKSGRMAHGAM----AAETHTGALAGADAVYGAAFRRAGMLRVFDLRELFDC- 285 Query: 294 VELLGSL 300 E LG + Sbjct: 286 AETLGRV 292 >gi|302878607|ref|YP_003847171.1| CoA-binding domain-containing protein [Gallionella capsiferriformans ES-2] gi|302581396|gb|ADL55407.1| CoA-binding domain protein [Gallionella capsiferriformans ES-2] Length = 892 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 92/236 (38%), Gaps = 17/236 (7%) Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSS 121 VI PP D I E + + V IT G + +V + Sbjct: 67 EAEVELVVIATPPKTVPDIIEECGKHGVKAAVIITAGFGEIGAEGQELERQVLVNAARYG 126 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 RLIGPNC G++ P G++ ++S+SG L + +G S+ V Sbjct: 127 IRLIGPNCLGVMRPSIGLNATFNNGGANAGNLALVSQSGALCTAILDWAQINDVGFSSVV 186 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G +F + L+ ++D T+SI++ E E+ +F+ R KP++ Sbjct: 187 SMGSSA--DVDFGETLDYLVSDSNTQSILLYIE----GIRESRRFMSSLRAAARVKPVIL 240 Query: 242 FVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G+ + M H +++ G + A++ AG+ + ++ + L Sbjct: 241 IKVGRHEAGSKAAMSHTASLV----GSDDAFDAAVRRAGVVRVETVTQLFSAAKAL 292 >gi|91200872|emb|CAJ73927.1| strongly similar to acetyl-CoA synthetase (ADP-forming) gene [Candidatus Kuenenia stuttgartiensis] Length = 706 Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 115/295 (38%), Gaps = 27/295 (9%) Query: 4 LVDKNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 T V V G + GK G + + Y + ++PK V + + Sbjct: 7 FFSPKT-VAVIGASREKGKVGHDIVKNLVQYGYQGTIYPVNPK------AEDIVGLRTYA 59 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA----- 115 + + ++ + ++I VP + E E +I IV I+ G + Sbjct: 60 NLKDIRD--TIDMAIIVVPARYVVKIVDECAEKKIDSIVVISAGFKESGIEGAIREKELC 117 Query: 116 -RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 ++ + + RL+GPNC G++ SC + +G++ S+SG L + E Sbjct: 118 QKITRHAIRLLGPNCLGLIDTQSCLNASFAADMPERGNIAFFSQSGALCTAILDWAVVEC 177 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G S V +G +D++ DE T+ I+ E + F+ K Sbjct: 178 VGFSKFVSMGNKA--DINEVDLINAMYEDENTKVILGYLE----GVKNGKDFIATTGKIT 231 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +KKP++ +G TA + ++G + + A K++G+ A + ++ Sbjct: 232 KKKPLIVVKSGGTAAGSKAASSHTGTLAGSERAFD---AAFKQSGVIRANTIEQL 283 >gi|311742661|ref|ZP_07716470.1| GNAT family acetyltransferase [Aeromicrobium marinum DSM 15272] gi|311314289|gb|EFQ84197.1| GNAT family acetyltransferase [Aeromicrobium marinum DSM 15272] Length = 903 Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 102/252 (40%), Gaps = 21/252 (8%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 +P + TV + + +++ VP D +++ + +V I+ G + + Sbjct: 249 GLPAYKTVQDIP--GEVDVAIVAVPAESVADVVLDCAAKGVHGLVVISAGFAEEGVEGRR 306 Query: 115 A------RLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 RLIGPNC G++ P + ++ +G VG +SG L Sbjct: 307 RQRALVGLSRSYGLRLIGPNCLGVINTAPGVQLNASLSPAMPPQGRVGFFCQSGALGTAI 366 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + S+ GLG ST V G D+L+ + D++TE +++ E G+ +F Sbjct: 367 LESVSRRGLGLSTFVSAGNRA--DVSGNDLLQYWQEDDSTEVVLLYLESIGNP----RKF 420 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 + + KPIV +G++ G +GH S + + ++AG+ + Sbjct: 421 SRIARRVSSTKPIVAVKSGRS-TQGVPVGHTVRRTSAPQSAVD---AMFRQAGVIQVDTL 476 Query: 287 ARIGRSLVELLG 298 + + ++L Sbjct: 477 DEMFD-VAQVLA 487 >gi|119871998|ref|YP_930005.1| CoA-binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119673406|gb|ABL87662.1| CoA-binding domain protein [Pyrobaculum islandicum DSM 4184] Length = 461 Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 64/308 (20%), Positives = 119/308 (38%), Gaps = 22/308 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGST-YWTGGNVNVPVF 59 +S L D + LV G + K G+ + T+ G ++P + + Sbjct: 2 ISKLFDPQSVALV-GASTKQGSV-GYVILENLVTRFKGVVYPVNPKYDEVELWGRRIKFY 59 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----RVKA 115 ++ E +A VI P + E+ +P+ + ++ G V KA Sbjct: 60 KSILEIDA--PIDAVVIATPAPTVPKILEEAGLKGVPVAIVVSSGFAEAGNVELENWTKA 117 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTS 171 ++ R++GPNC G+ + I G + ++S+SG + + + Sbjct: 118 VAKQYGIRVLGPNCIGVYNAYTNFDTIFLPADRAGRPPPGPLALISQSGAVAAAIMDWAA 177 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + +G V G +++LE F AD+ + I + E E A++FL+ Sbjct: 178 RRKIGLGLMVNYGNK--IDITEVELLEAFAADDRIKVITLYIEGFKYPGE-ASRFLESVR 234 Query: 232 KRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 K KKP+V + AG+ R + H A+ G E ++AG+ A S + Sbjct: 235 KIVPKKPVVVYKAGRGRAAQRAVKSHTAAMA----GTYEMYHGLFQQAGVIEASSVREMF 290 Query: 291 RSLVELLG 298 + + L Sbjct: 291 D-MAKALA 297 >gi|82594846|ref|XP_725597.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23480664|gb|EAA17162.1| CoA binding domain, putative [Plasmodium yoelii yoelii] Length = 949 Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 107/238 (44%), Gaps = 18/238 (7%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK---- 114 + ++ + K+ + + +VI VP A+ E + ++ IT G +K Sbjct: 90 YKSLKDIKDES-IHLAVIAVPRDYVLKAMEELKYKNVRGVIIITAGFKETGEEGLKLEKQ 148 Query: 115 --ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 +K++ R+IGPNC GI+ + KG +LS+SG + A+ + Q Sbjct: 149 IIDIAQKNNIRIIGPNCLGIIHSYHNMNASFADNEVLKGHFSLLSQSGAICSAALDLSLQ 208 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 +G S + +G + +F +++E D+ T+ I++ E G + +F++ + Sbjct: 209 HNIGFSHFISVGS--MCDVQFYELIEYLFYDDNTKYILLYVESIG----DMDKFMETCKR 262 Query: 233 RGRKKPIVGFVAGKTAPPG-RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KPI+ +GKTA + H G+++ G E +MK+ G+ +A + + Sbjct: 263 ICLYKPIIILKSGKTAKAAEAAISHTGSMV----GNYEIFYASMKKLGVLVAENFEEL 316 >gi|257388337|ref|YP_003178110.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Halomicrobium mukohataei DSM 12286] gi|257170644|gb|ACV48403.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Halomicrobium mukohataei DSM 12286] Length = 699 Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 117/299 (39%), Gaps = 30/299 (10%) Query: 1 MSILVDKNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVP 57 +S L + +V V G T G G TE +V ++P K + + Sbjct: 4 LSTLFSPD-RVAVVGATDSDGAVGRAITENLQASFAGDIVA-VNPYK------ESVLGLH 55 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMV 111 TVA+ + +VI VPP A D+I E+ EA I +V IT G Sbjct: 56 CHDTVADV--EADIDVAVIVVPPDVAVDSIREAGEAGIENVVVITAGFGETGAEGAAREK 113 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 ++ + L+GPN GI++ + + G + +S+SG + + Sbjct: 114 DLRETAAEYDLNLVGPNSLGIMSTPTGLNATFGNEMATSGGISFMSQSGAFVTAVLDWAA 173 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + +G V +G + + D ++ + D T+ I+ E E+ A F++ Sbjct: 174 ERDVGFKDIVSLGNKAI--LDERDFIDEWGTDPDTDVILGYLEDI----EDGAGFVQTAR 227 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 + + PIV +G+T A A +G G+E A ++++G + + Sbjct: 228 EVTQDTPIVLVKSGRTDAGA----SAAASHTGAMAGSEAAYEAGLEQSGAIRVETVQEL 282 >gi|302342119|ref|YP_003806648.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075] gi|301638732|gb|ADK84054.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075] Length = 738 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 64/299 (21%), Positives = 125/299 (41%), Gaps = 29/299 (9%) Query: 1 MSILVDKNTKVLVQG---LTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVP 57 M+ L N+ V G + GK G + V ++PK G P Sbjct: 243 MAALFHPNS-VAYIGASDVFGKWGNRLFTDTLHGGFPGQVHLVNPK------GGVIAGRP 295 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI----PVLDMVR- 112 V +V + E + +V+ VP + I E + + +V ++ G P ++ Sbjct: 296 VHKSVLDIAE--PVDLAVVTVPAAKVLALIPELKQKGVTSVVLVSSGFAEVGPEGQAMQD 353 Query: 113 -VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + ++ ++GPN G+ P G+ G+ +++SG + + +F Sbjct: 354 ELVRAAREAGILILGPNTMGLCNPHHKFYCSGAGARPAPGATAFVAQSGNMGVQLLFFAE 413 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +G+G G G + + E D L+ F AD+ T+++++ E ++ +F + + Sbjct: 414 DQGIGIRAFAGSGNEAMLTVE--DALDGFEADKLTKTVLLYLESV----KDGRRFFQSAS 467 Query: 232 KRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + R+KP+V G+TA G+ H GA+ S + A ++AG+ +A P + Sbjct: 468 RLSRRKPVVALKGGRTAIGGKAAASHTGALASNNR----VFEAACRQAGVVLADQPMDM 522 >gi|221059978|ref|XP_002260634.1| acetyl CoA synthetase [Plasmodium knowlesi strain H] gi|193810708|emb|CAQ42606.1| acetyl CoA synthetase, putative [Plasmodium knowlesi strain H] Length = 995 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 117/287 (40%), Gaps = 27/287 (9%) Query: 13 VQGLTGKAGTF---HTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT 69 V G T +AG+ + + ++ + ++ K Y + T+ + E Sbjct: 48 VIGATERAGSVGNSIVKNLMQGEESYKLYFVNSKGNKVYNRDS------YKTIGDVPEE- 100 Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSR 123 + +VI VP + + + + +V +T G K + + R Sbjct: 101 NIDLAVIAVPRNHVLGVMKDLKSKNVKGVVIVTAGFKETGSEGTKLEQQIIDVAKTNGIR 160 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 +IGPNC GI+ + KG+ +LS+SG + A+ + Q +G S + + Sbjct: 161 IIGPNCLGIIHSYHNMNASFADNTILKGNFSLLSQSGAICSAALDLSLQHNIGFSHFISV 220 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G + +F +++E DE T+ I++ E G + +F+ K KPI+ Sbjct: 221 GS--MCDVQFYELVEYLFYDENTKYILLYVESIG----DMNKFMAVCKKVCLYKPIILLK 274 Query: 244 AGKTAPPG-RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +GKTA + H G+++ G E +MK+ G+ + + + Sbjct: 275 SGKTAKAAEAAISHTGSMV----GNYEIFYASMKKLGVLVVDNFEEL 317 >gi|292655160|ref|YP_003535057.1| acetyl-CoA synthetase [Haloferax volcanii DS2] gi|291372641|gb|ADE04868.1| acetyl-CoA synthetase [Haloferax volcanii DS2] Length = 697 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 107/298 (35%), Gaps = 28/298 (9%) Query: 10 KVLVQGLTGKAGTFHTEQA--ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 ++ V G T + G ++ V ++PK + + V Sbjct: 12 RIAVVGATEREGAIGRAIMDNLIDEFDGEVVPVNPK------YDELFGLQCYGDVG---- 61 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR------LEKSS 121 T A+ +VI VPP A+ + EA I +V IT G E+ Sbjct: 62 ETDADLAVIVVPPKVVLPAMKSAGEAGIQNVVVITAGFGETGSEGAAREQELRDIAEEYD 121 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 ++GPN GI+ D + G++ +S+SG + + E +G V Sbjct: 122 LNVVGPNSLGIMNTDVGMNATFGPDMALDGNMSFMSQSGAFITAVIDWANDEDIGFKDIV 181 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G V + D +E + D TE I+ E + E F+ + PIV Sbjct: 182 SLGNKAV--LDEADFIETWNDDPDTEVIIGYLEGISAGRE----FIDSARDVTKDTPIVL 235 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 +GKT + I+G E +++AG+ A S + + +LG Sbjct: 236 VKSGKTDAGAQAASSHTGTIAGSDAAYE---AGLEQAGVIRADSVQHLFDT-ARVLGD 289 >gi|124267252|ref|YP_001021256.1| hypothetical protein Mpe_A2065 [Methylibium petroleiphilum PM1] gi|124260027|gb|ABM95021.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 897 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 100/282 (35%), Gaps = 16/282 (5%) Query: 9 TKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKER 68 + V V G + + G+ G + G VP + Sbjct: 13 SSVAVIGASDRIGSVGGTVWRNLRAGGFQGPVLAVNPHHAVLDGQPVVPNIGALLVV--- 69 Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPN 128 + +V+ PP + E + +T G+ + + R++GPN Sbjct: 70 --PDLAVLCTPPETLPPLVAELGARGTRAAIVMTAGLDAMRKQALLDAARPHLLRVLGPN 127 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 C G+LTP + G + +S+SG L + LG S V +G Sbjct: 128 CLGLLTPAIGLNASFAHADALPGDIAFVSQSGALVTAVLDWARSRRLGFSHLVSLGEHA- 186 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 +F D+L+ +D T SI++ E + E +F+ R KP+V AG+ Sbjct: 187 -DVDFGDLLDYLASDPQTRSILLYIE----SIESPRKFMSAARAAARNKPVVVVKAGRAG 241 Query: 249 PPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARI 289 HA A +G G++ A++ AG+ + + Sbjct: 242 NGI----HAAASHTGALAGSDVVFDAAIRRAGMLRVDTLQEL 279 >gi|89901129|ref|YP_523600.1| GCN5-like protein N-acetyltransferase [Rhodoferax ferrireducens T118] gi|89345866|gb|ABD70069.1| GCN5-related N-acetyltransferase [Rhodoferax ferrireducens T118] Length = 892 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 11/221 (4%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 T A+ ++I +P + A+ + + + I+ GI + + L+G Sbjct: 63 AHTEADLAIIALPAAEVAAALEIAGRIKCRAALVISSGIDAALAAELNKIARRDGMHLLG 122 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNC G P + G + G + ++S+SG LT + + G+G ST V +G Sbjct: 123 PNCLGFQRPHLLLNASVAGVLSAPGPLALVSQSGALTSSILDWAQKNGVGFSTVVSLG-- 180 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 P + VL+ +D T SIV+ E S A +F+ KP+V G+ Sbjct: 181 PNTAVDMAQVLDFLASDAHTHSIVVYLEGISS----ARRFMSALRAAANAKPVVVLKGGR 236 Query: 247 TAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 A R + H+GA++ G + A++ AG S Sbjct: 237 KAAGNRAALTHSGAIV----GSDDVFDAALRRAGAVRVRSF 273 >gi|297526363|ref|YP_003668387.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Staphylothermus hellenicus DSM 12710] gi|297255279|gb|ADI31488.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Staphylothermus hellenicus DSM 12710] Length = 461 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 107/277 (38%), Gaps = 21/277 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + I Y + I+PK + + +V E + + ++I Sbjct: 20 GKIGHTIMKNIIEYGYKGRIYPINPK------ADKILGYKAYKSVLEVPDE--IDMAIIV 71 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGPNCPGIL 133 VP E + ++V I G + + + +L + R++GPN GI Sbjct: 72 VPEQIVLKVAEECGRKGVKVLVVIASGFSEVGNIEAERKLVEIARRYGMRVLGPNIFGIT 131 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 + +G + +++SG L + T E +G S V +G + + Sbjct: 132 YTPAKLNATFGPKDVLEGPIAFITQSGALGIALMGWTIMEEIGISALVSMGN--MADIDV 189 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 IDV + D T I + E +F+++ K KKP++ AG++ + Sbjct: 190 IDVSKYLAGDPNTRVITIYLEGLKPG--TGRKFIEEMKKVTAKKPVIVIKAGRS----KR 243 Query: 254 MGHAGAVISGGKGGAED-KINAMKEAGICIAPSPARI 289 A A +G G+++ A K+AGI A + + Sbjct: 244 GAAAAASHTGSLAGSDNLYQAAFKQAGIIRAYTTEEM 280 >gi|212224816|ref|YP_002308052.1| archaeal succinyl-CoA synthetase (NDP forming), large subunit [Thermococcus onnurineus NA1] gi|212009773|gb|ACJ17155.1| archaeal succinyl-CoA synthetase (NDP forming), large subunit [Thermococcus onnurineus NA1] Length = 469 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 97/265 (36%), Gaps = 23/265 (8%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 + Y + KG PV+ ++ E + + +VI VP D I Sbjct: 37 LKYEGKVYAVNV---KGGE-VEVNGKKFPVYRSIKEISDE--IDVAVIAVPAKFVPDVID 90 Query: 89 ESIEAEIPLIVCITEGIPVLDMVR----VKARLEKSSSRLIGPNCPGILTPDSCK--IGI 142 E E + V I+ G + R K RL+GPNC G+ ++ Sbjct: 91 ECGEKGVKGAVVISAGFKEAGRADLEEEIVKRARKWGIRLVGPNCLGVTNLENGFDCNFN 150 Query: 143 MPGSIFRK--GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 P R G + +S+SG + + +G S + +G + + D + Sbjct: 151 PPERQARPPAGKIAFMSQSGAFGAAILDWAASHKIGMSKFISLGN--MADLDESDFMAYL 208 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAV 260 D ++ V+ G I G ++ +F + KKP++ +G+T + Sbjct: 209 GEDP--KTGVITGYIEG--VKDGRKFFNTAKEVTLKKPVIILKSGRTEAGAKAAASHTGS 264 Query: 261 ISGGKGGAEDKINAMKEAGICIAPS 285 ++G + A K+AG+ A S Sbjct: 265 LAGSYAIYQ---AAFKQAGVLEAKS 286 >gi|242280507|ref|YP_002992636.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242123401|gb|ACS81097.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 708 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 96/262 (36%), Gaps = 23/262 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P+ G + + +++ T + +V+ VP E +E + + Sbjct: 41 PVNPR------GGDINGISAYKKISDI--GTPVDLAVVAVPRDLVLGIFKELLELGVSSV 92 Query: 99 VCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 V IT G +D V++ E+ L+GPNC G++ GS Sbjct: 93 VVITAGFKEVDHEGWLLEVQLAKLAEEHGVNLLGPNCLGVINSRGGVNASFATGNPLPGS 152 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 +G S+SG L + E +G S + +G V ++E D T+ I+ Sbjct: 153 MGFFSQSGALCVAVLDWALGEKVGFSKFISLGNKAVI--NEASMIEYLGNDPETKVILGY 210 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 E E+ +F+ AK KKPI+ AG T R ++G + Sbjct: 211 VENI----EDGREFMAQAAKVSMKKPILMMKAGTTPAGARAASSHTGAMAGSD---QACD 263 Query: 273 NAMKEAGICIAPSPARIGRSLV 294 A +++G+ + Sbjct: 264 AAFRQSGVIRVEKLDELFNLAK 285 >gi|147678572|ref|YP_001212787.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI] gi|146274669|dbj|BAF60418.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI] Length = 701 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 98/263 (37%), Gaps = 20/263 (7%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P G P ++V+ E +V+ VP +A E EA + Sbjct: 38 YRGSIYPINPREKEIEGLACYPAVSSVSGEVE-----LAVLSVPAGRVLEAARECGEAGV 92 Query: 96 PLIVCITEGIPVLDMVRV------KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 ++ +T G + + R++GPNC G++ + + Sbjct: 93 KALIVVTAGFKEIGREGMELEKELVETCRTYGMRMLGPNCVGLMDASTPLNASFSSTFTT 152 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 G + LS+SG + + +S GLG + V +G ID +E D+ T I Sbjct: 153 GGRIAFLSQSGAMLLAILDWSSSVGLGFNKVVSLGNKA--DLNEIDFIEDAANDDYTRVI 210 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 + E + +FL+ ++ RKKP++ + +G + R ++G E Sbjct: 211 LCYIEDI----VDGRRFLEVASEAARKKPVIVYKSGISQSGARAASSHTGALAGSDLAYE 266 Query: 270 DKINAMKEAGICIAPSPARIGRS 292 A + GI A S + Sbjct: 267 T---AFNDCGIIRAHSMTELFDL 286 >gi|300697554|ref|YP_003748215.1| fused acyl-CoA synthetase: NAD(P)-binding subunit; ATP-binding subunit [Ralstonia solanacearum CFBP2957] gi|299074278|emb|CBJ53823.1| fused acyl-CoA synthetase: NAD(P)-binding subunit; ATP-binding subunit [Ralstonia solanacearum CFBP2957] Length = 903 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 88/248 (35%), Gaps = 20/248 (8%) Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------- 109 P +V + ++I P I + ++ G Sbjct: 58 PCHASVDDLPA--CPELALICTPAPTVPGLIAALGRRGCRAAIVLSAGFEQQADAAGGSL 115 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 V R++GPNC G++ P ++ G + S+SG LT + Sbjct: 116 RQAVLDASRPYQLRILGPNCVGLIVPGIGLNASFASTMALPGKLAFASQSGALTTAVLDW 175 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + +G S + +G + DVL+ D AT +I++ E A +F+ Sbjct: 176 SRSRQIGFSYFISLGDS--TDVDLADVLDYLAGDPATHAILLYVE----AVRSGRKFMSA 229 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPAR 288 R KP++ AG+ + A A +G GA+D A++ AG+ S Sbjct: 230 ARAAARNKPVLIVKAGRVPEGAK----AAASHTGALAGADDVYDAAIRRAGMLRVDSTED 285 Query: 289 IGRSLVEL 296 + ++ L Sbjct: 286 LFDAVETL 293 >gi|57640879|ref|YP_183357.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus kodakarensis KOD1] gi|57159203|dbj|BAD85133.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus kodakarensis KOD1] Length = 474 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 111/307 (36%), Gaps = 31/307 (10%) Query: 11 VLVQGLT---GKAGTFHTE-QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 V + G T GK G E + + G I+P V+ +V E Sbjct: 18 VAIIGATDKKGKVGNVIFENFRMNKERGIFKGNIYPVNPK---LDEIEGYKVYHSVKELP 74 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKS 120 + T + +VI +P + E E I +V IT G L + + Sbjct: 75 DDT--DLAVISIPAKFVPATMREVAEKGIKAVVIITGGFGELGEEGKRMEQEILEIARAN 132 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGS----IFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 R+IGPNC G+ PD+ + + G + +S+SG + + G+G Sbjct: 133 GIRVIGPNCVGVYVPDTGVDTVFLPEEKMDRPKSGPIAFVSQSGAFAAAMLDWAAMAGIG 192 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 V G + D++E F+ D+ + + E ++ +F++ K + Sbjct: 193 IGKMVSYGNK--LDVDDADLMEYFIHDDEIKVVTFYIE----GVKDGRKFMEAAKKITKV 246 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA---RIGRSL 293 KP++ +G+T + ++G + K+ GI A + ++ Sbjct: 247 KPVIALKSGRTEYGAKAASSHTGSLAGADTIYDAV---FKQTGIIRAEDFEHMFDLAKAF 303 Query: 294 VELLGSL 300 LL L Sbjct: 304 AALLHKL 310 >gi|57641815|ref|YP_184293.1| succinyl-CoA synthetase (NDP forming), large subunit [Thermococcus kodakarensis KOD1] gi|57160139|dbj|BAD86069.1| archaeal succinyl-CoA synthetase (NDP forming), large subunit [Thermococcus kodakarensis KOD1] Length = 469 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 98/267 (36%), Gaps = 22/267 (8%) Query: 29 ILYCQTQVVGGIHPK--KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA 86 + + G ++P KG V+ +V E + + +VI VP D Sbjct: 32 MRSITLRFDGKVYPVNVKGGE-IEVNGKKFKVYRSVKEIPDE--VDVAVIAVPAKFVPDV 88 Query: 87 IIESIEAEIPLIVCITEGIPVLDMVR----VKARLEKSSSRLIGPNCPGILTPDSCK--I 140 I E E + V I+ G + R K R++GPNC G+ ++ Sbjct: 89 IDECGEKGVKAAVVISAGFKEAGRADLEEELVRRARKWGIRVVGPNCLGVTNLENGFDCN 148 Query: 141 GIMPGSIFRK--GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 P R G V +S+SG + + +G S + +G + + D + Sbjct: 149 FNPPERQARPPFGKVAFMSQSGAFGAAILDWAASHKIGMSKFISLGN--MADLDESDFMA 206 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D ++ V+ G I G ++ +F + KKP+V +G+T + Sbjct: 207 YLGDDP--KTGVITGYIEG--VKDGRKFFNTAKEVTLKKPVVVLKSGRTEAGAKAAASHT 262 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPS 285 ++ G + A ++ G+ A S Sbjct: 263 GSLA---GSYKIYQAAFEQTGVLEAKS 286 >gi|20094682|ref|NP_614529.1| Acyl-CoA synthetase (NDP forming) [Methanopyrus kandleri AV19] gi|19887846|gb|AAM02459.1| Acyl-CoA synthetase (NDP forming) [Methanopyrus kandleri AV19] Length = 446 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 93/241 (38%), Gaps = 20/241 (8%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPL 97 G ++P + + ++ E ER + +VI VP + + E+ EA +P Sbjct: 36 GPVYPVNP---HADELLGRRCYPSLLELPER--VDLAVIAVPARVVPEVVREAGEAGVPY 90 Query: 98 IVCITEGIPVLDM----VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSV 153 V I+ G + K RL+GPNC GI+ G++ Sbjct: 91 CVVISAGFSEAGNEDLERELVRTARKVGVRLVGPNCLGIINARIGLNASFAAESPPPGNI 150 Query: 154 GILSRSGTLTYEAVFQTSQ-----EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 +++SG L + S G+G S V +G +F D LE D+ T+ Sbjct: 151 AFVTQSGALATSVIDWFSSGDVGTVGVGFSKFVSLGNAA--DLDFPDFLEYLAEDDDTDV 208 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 +V+ E ++ +FL ++ +KP++ G+T +G ++G Sbjct: 209 VVLYLE----GVKDGPRFLDALSECAGRKPVIVLKGGRTEAGAEAVGTHTGSLAGSGEVY 264 Query: 269 E 269 E Sbjct: 265 E 265 >gi|150400473|ref|YP_001324239.1| acetyl coenzyme A synthetase subunit alpha [Methanococcus aeolicus Nankai-3] gi|150013176|gb|ABR55627.1| Acetyl coenzyme A synthetase (ADP forming) alpha domain [Methanococcus aeolicus Nankai-3] Length = 714 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 109/281 (38%), Gaps = 19/281 (6%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + +++ + I+P G + + +V + + +VI Sbjct: 34 GKVGYAIMKNLMVFKEQNKERKIYPINPKYEEVFG---LKCYKSVLDV--ENNIDLAVIA 88 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV----KARLEKSSSRLIGPNCPGIL 133 +P A+ E + I + IT G + ++ K +K + R+IGPNC GI+ Sbjct: 89 IPSKFVPMALEECGKKGIKGAIIITAGFSEVGNNKLEEELKEIAKKYNIRIIGPNCLGII 148 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 + F++G+V +S+SG + + + +G S V G + Sbjct: 149 NMHNKLNASFSKEYFKEGTVAFISQSGAILTAILDISPLINVGFSKIVSTGNK--MDIQE 206 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 D++E D+ T IVM E +F++ K + KPI+ +GK+ + Sbjct: 207 SDLMEYLANDDNTSVIVMYIEGLKDK-----KFIESAKKLSKTKPIIILKSGKSEKGKKA 261 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 + ++G + K++ + A + + + Sbjct: 262 VSSHTGSLAGDNQIYDAV---FKKSNVIEAETFEELVNMMH 299 >gi|332186597|ref|ZP_08388340.1| acetyltransferase family protein [Sphingomonas sp. S17] gi|332013249|gb|EGI55311.1| acetyltransferase family protein [Sphingomonas sp. S17] Length = 876 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 61/287 (21%), Positives = 106/287 (36%), Gaps = 27/287 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPK---KGSTYWTGGNVNVPVFTTVAEAKERTAANAS 74 G G I + +HP+ + W ++P +A + + Sbjct: 25 GSIGDTVLRNVIAGGFGGPIFAVHPEPVERPGVTWVSHIADLP-----------SAPDIA 73 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA-RLEKSSSRLIGPNCPGIL 133 VI P + + V + +G+ E RL+GP+ G+L Sbjct: 74 VICCPSPKLAEIVEALGRRGTRTGVILADGLGDRGARGALRGIAEAHGMRLLGPDSVGLL 133 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 P R G + LS+SG L + G+G S V +G + +F Sbjct: 134 VPSVRLNASFAARAARPGRLAFLSQSGALVTAMLDWADARGVGFSGVVALG--DMIDVDF 191 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 D+++L+ AD T++I++ E G +AA+FL KP++ AG+T RT Sbjct: 192 ADLIDLYTADPHTDAILLYVEEIG----DAARFLSAARAATLIKPVIAIKAGRTWASHRT 247 Query: 254 M-GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 H A+ G + A + GI + A + + ++L Sbjct: 248 DPRHRSAMH----GDYDAYAAAFRRGGIVMVDMMADLFDA-AQVLSR 289 >gi|147676825|ref|YP_001211040.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI] gi|146272922|dbj|BAF58671.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI] Length = 700 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 100/288 (34%), Gaps = 20/288 (6%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + K G ++ G I P + +P F +VA+ E Sbjct: 13 VAVIGASNKPGKIGCALVSNLIESGYQGRIFPVN---SREKEILGLPCFPSVADIPEE-- 67 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV---KARL---EKSSSRL 124 +V VP DA + +V +T G + + K L ++ R+ Sbjct: 68 VETAVFAVPAPKVLDAAAGCGRKGVKNLVVLTAGFKEMGREGMELEKKFLGVCKEYGMRM 127 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPNC G L + +G + +S+SG + + + G+G S +G Sbjct: 128 LGPNCVGFLDTHTPINATFLKGFPARGEIAFISQSGAMLAAILDWSKSAGIGYSKIYSLG 187 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 +D + D T+ I+ E E FL+ ++ RKKP++ + Sbjct: 188 NKA--DLNEVDCIAEAADDPNTKVILCYIEDVACGPE----FLRVVSQATRKKPVIILKS 241 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 G + + ++G A K G+ S + + Sbjct: 242 GTSQAGAQAASSHTGALAGSDLAY---NTAFKRCGVIRVDSMSELFDL 286 >gi|90425520|ref|YP_533890.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris BisB18] gi|90107534|gb|ABD89571.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris BisB18] Length = 899 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 100/267 (37%), Gaps = 23/267 (8%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPL 97 G ++P+ P ++AE + V+ P + E+ Sbjct: 45 GVVNPR------YQDIGGTPTMRSLAEL--SFVPDLVVVTAPARTVPAIVAEAGRLGAAG 96 Query: 98 IVCITEGI---PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 V I+ G+ + RLIGPNC G++ P + G + Sbjct: 97 AVIISSGLGRGKGSFGDAAERAARAHGIRLIGPNCLGVMLPGVHLNASFAAHMPNAGHLA 156 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++S+SG + V +++ +G S V IG + D+L+ F D T +I++ E Sbjct: 157 LISQSGAIAAGMVDWAAEKSIGFSGIVSIGDQ--LDVDIADLLDHFALDVQTRAILLYIE 214 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-N 273 A ++A +F+ R KP+V +G+ A + A A +G GA+ Sbjct: 215 ----AVKDARKFMSAARAAARIKPVVVVKSGRMAQGAK----AAATHTGALAGADAVYDA 266 Query: 274 AMKEAGICIAPSPARIGRSLVELLGSL 300 A AG+ + E LG + Sbjct: 267 AFHRAGMLRVFDLRELFDC-AETLGRI 292 >gi|217970451|ref|YP_002355685.1| CoA-binding protein [Thauera sp. MZ1T] gi|217507778|gb|ACK54789.1| CoA-binding domain protein [Thauera sp. MZ1T] Length = 895 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 56/269 (20%), Positives = 102/269 (37%), Gaps = 25/269 (9%) Query: 21 GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPP 80 G+ + + I+PK V + +V + +R + V+ + Sbjct: 29 GSVLMRNMLEAGYKGKLFAINPK------HEKVHGVACYKSVEDVPQRL--DLVVMAIRA 80 Query: 81 SGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILT 134 + A + ++ ++ G +V + RL+GPNC G++ Sbjct: 81 EKTPALMEACGRAGVKAVILLSGGFSESGARGALLERQVVEAAHRHRIRLLGPNCLGVMR 140 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 P + KGS+G++S+SG L + +G ST V +G +F Sbjct: 141 PQLGVNATFAHASALKGSIGLISQSGALCAAILDWAKPNNVGFSTVVSLGSS--SDIDFG 198 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM 254 +VLE ++D TESI + E +A +F+ R KP++ AG+ R + Sbjct: 199 EVLEYMISDPRTESIFLYVE----GIRDARRFMSALRGAARVKPVLLVKAGRHPGASRAI 254 Query: 255 GHAGAVISGGKGGAEDKI-NAMKEAGICI 282 SG G + A++ AG+ Sbjct: 255 L----SHSGAPMGEDAVFDAALRRAGVIR 279 >gi|5851949|emb|CAB53456.3| ATP-citrate lyase [Gallus gallus] Length = 170 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 10/165 (6%) Query: 43 KKGSTYWTGGNVNVPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVC 100 + YW + +PV+ +++A + + + + A D+ +E++ +I I Sbjct: 5 HRQKFYWGHKEILIPVYKNMSDAMRKHPEVDVLINFASLRSAYDSTVETMNYPQIRTIAI 64 Query: 101 ITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGS 152 I EGIP ++ +K +IGP G + P KIG I+ ++R GS Sbjct: 65 IAEGIPEALTRKLIKAADKKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGS 124 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 V +SRSG ++ E S+ G V IGGD G+ F+D + Sbjct: 125 VAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHV 169 >gi|313126866|ref|YP_004037136.1| acyl-CoA synthetase (ndp forming) [Halogeometricum borinquense DSM 11551] gi|312293231|gb|ADQ67691.1| acyl-CoA synthetase (NDP forming) [Halogeometricum borinquense DSM 11551] Length = 697 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 112/296 (37%), Gaps = 24/296 (8%) Query: 10 KVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT 69 ++ V G T + G+ + G + P G VP V + Sbjct: 12 RIAVVGATEREGSV-GRAIMENLVADFDGDVVPVNPKYDEVFG---VPAVADVG----ES 63 Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR------LEKSSSR 123 A+ +VI VPP A DA+ ES +A I +V +T G E+ Sbjct: 64 DADLAVIVVPPHIAVDAVRESGKAGIRNVVVVTAGFGETGSEGASREQELTEVAEEYDLN 123 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPN G+++ + G++ +S+SG + + +G+G V + Sbjct: 124 LVGPNSLGLMSTPTGLNATFGPDNALPGNMSFMSQSGAFITAVLDWANDQGIGFKDVVSL 183 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G V + D ++ + DE TE I+ E E +F+ + + PIV Sbjct: 184 GNKAV--LDEADFVDAWGDDEDTEVIIGYLEGIS----EGREFIDTAREVTQDTPIVLVK 237 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 +G+T + I+G E ++ +AG+ A S + + +L S Sbjct: 238 SGRTDAGAQAASSHTGTIAGSDQAYEAGLD---QAGVIRAESVQELFDA-ARVLES 289 >gi|297569084|ref|YP_003690428.1| CoA-binding domain protein [Desulfurivibrio alkaliphilus AHT2] gi|296924999|gb|ADH85809.1| CoA-binding domain protein [Desulfurivibrio alkaliphilus AHT2] Length = 699 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 63/279 (22%), Positives = 107/279 (38%), Gaps = 25/279 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G I V ++P + +P + T+ A + + VI Sbjct: 23 GKVGHDILANLIAGGFAGRVLPVNP------VADEILGLPCWPTLKGAGAQ--IDLGVIA 74 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPG 131 VP S +A+ + + A + IT G +D ++ AR + RL+GPNC G Sbjct: 75 VPRSLVEEAVEDCLAAGARAVAVITAGFKEMDATGAELEKKLAARCRQQQVRLLGPNCLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ G + G++ ++S+SG L + ++ LG + V IG Sbjct: 135 LINSHHRLNASFAGEMPACGNISVISQSGALATAILDLAAERHLGLAKLVSIGNKA--DL 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +D+L DE T IV E S + F+K + KP++ +G T Sbjct: 193 NEVDLLSALTDDEQTGVIVAYLEDISSGD----DFVKAATEASNHKPVIILKSGTTEAG- 247 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARI 289 A +G GA+ A + AG+ A + + Sbjct: 248 ---RQAATSHTGVLAGADIAYGAAFRRAGVIRADTFESL 283 >gi|89898829|ref|YP_521300.1| GCN5-like protein N-acetyltransferase [Rhodoferax ferrireducens T118] gi|89343566|gb|ABD67769.1| GCN5-related N-acetyltransferase [Rhodoferax ferrireducens T118] Length = 890 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 102/278 (36%), Gaps = 16/278 (5%) Query: 13 VQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAAN 72 V G + + G+ G ++ + G + PV ++ E A Sbjct: 17 VFGASLRVGSVGATVWHNLSSGHYQGALYAVNPKHHKLGNH---PVVAKASDLPEVPA-- 71 Query: 73 ASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGI 132 +VI PP+ I V +T G+ + R++GPNC G+ Sbjct: 72 LAVICTPPASVPGLIETLGRLGTRAAVVMTAGMNDQQKQAMLDAAGAHLLRILGPNCIGL 131 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 L P + G V +S+SG L + G+G S V +G + Sbjct: 132 LAPHQGLNASFSHIDAQPGEVAFVSQSGALVTAMLDWAQGRGIGFSYFVSLGEHA--DVD 189 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 F D+L+ +D T +I++ E + E +F+ R KP++ AG++A Sbjct: 190 FGDMLDYLASDAKTRAILLYAE----SIESPRKFMSAARAAARNKPVIVVKAGRSALGQL 245 Query: 253 TMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARI 289 A A +G G++ A+ AG+ + + Sbjct: 246 ----AAASHTGALAGSDMVFEAAIARAGMLRVNTLQEL 279 >gi|261856448|ref|YP_003263731.1| CoA-binding protein [Halothiobacillus neapolitanus c2] gi|261836917|gb|ACX96684.1| CoA-binding domain protein [Halothiobacillus neapolitanus c2] Length = 900 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 57/289 (19%), Positives = 95/289 (32%), Gaps = 26/289 (8%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V + G + + G T G I P G VP Sbjct: 15 VAIFGASERKGAVGTMVLANLVDAGFKGAIVPVNPKYTQVQGLPCVP-----DLLHLDQP 69 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV----------LDMVRVKARLEKS 120 + +VI P + + A + V ++ G M ++ Sbjct: 70 VDLAVIATPSVSVPGILRQCGMAGVKSAVILSAGFGEGGEADRSDGKRLMRESLELAQQF 129 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 RL+GPNC G++ P + G + ++S+SG L + G+G S Sbjct: 130 GMRLMGPNCLGLMRPSIGLNATFSHNQAFPGKLALVSQSGALVTAVLDWAQSRGVGFSAI 189 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 G +F D+L+ D T I++ E ++A FL R KP++ Sbjct: 190 ASTG--DAADLDFGDLLDYLALDTQTTGILLYIE----GIKDARHFLSGLRAAARMKPVI 243 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPAR 288 + + A A A +G GA+D A+ AG+ + Sbjct: 244 VLKSARHAAG----SKAAATHTGALIGADDVFDAALTRAGVVRVERITQ 288 >gi|159900267|ref|YP_001546514.1| acetyl coenzyme A synthetase subunit alpha [Herpetosiphon aurantiacus ATCC 23779] gi|159893306|gb|ABX06386.1| Acetyl coenzyme A synthetase (ADP forming) alpha domain [Herpetosiphon aurantiacus ATCC 23779] Length = 697 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 96/238 (40%), Gaps = 17/238 (7%) Query: 60 TTVAEAKERTAANA--SVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK--- 114 T + A+ +V+ +PP + + E + + +V IT G + VK Sbjct: 53 QTAYPSVAAVPADVELAVLVIPPQHVLNVVEECGQKGVRGLVVITAGFKEVGGEGVKLEH 112 Query: 115 ---ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 +++ R++GPNC G++ S + G + +S+SG + + + Sbjct: 113 QLVEIVQRYGMRMVGPNCLGVIDTVSDLNASFAALMPADGEIAFMSQSGAVCTAILDWSK 172 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + +G S V +G + + +L+ + D + I+ E + F++ Sbjct: 173 EANIGFSRFVSLGNK--SDVDEVALLQAWGNDPQNKVILAYLEGIS----DGPGFIQAAR 226 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + ++ P++ +G TA R + ++G + E A ++GI A + ++ Sbjct: 227 EVTKRTPVIAIKSGTTAAGTRAISSHTGSLAGSESAYES---AFGQSGIIRARTMEQL 281 >gi|307824195|ref|ZP_07654421.1| CoA-binding domain protein [Methylobacter tundripaludum SV96] gi|307734575|gb|EFO05426.1| CoA-binding domain protein [Methylobacter tundripaludum SV96] Length = 893 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 63/306 (20%), Positives = 114/306 (37%), Gaps = 24/306 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 ++ + +V G + + + + + GG++P G P Sbjct: 6 LNRFFTPKSVAIV-GASEREESVGYRLLLNMQEAGFKGGLYPVNNKRDTLLGLKAYPDLN 64 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ 114 V E + VI P + + E + ++ I+ G L + + Sbjct: 65 AVPE-----DLDLVVIATPAPSVPGVVRQCGEKGVTSVIIISAGFGELGVEGKRLQQEVL 119 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + S R+IGPNC G+ P + G++ +LS+SG + + + Sbjct: 120 DIAHRYSIRIIGPNCLGVARPSGHLNATFGDGTIKDGNLALLSQSGAVCTAILDWAKSQD 179 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G ST V +GG +F +VL+ D T I+M E +A +FL Sbjct: 180 IGFSTVVSMGGAA--DIDFGEVLDYLATDSKTTGILMYVE----GIRDARRFLSGLKAAA 233 Query: 235 RKKPIVGFVAGKT-APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 R KP++ +G+ A M H GA++ GG A+ AG+ S + + Sbjct: 234 RLKPVILIKSGRHEAGCKAAMSHTGAMV----GGDNVFDAAIARAGVVRVYSINELFSA- 288 Query: 294 VELLGS 299 +L + Sbjct: 289 ARVLAN 294 >gi|224368786|ref|YP_002602947.1| SucD3 [Desulfobacterium autotrophicum HRM2] gi|223691502|gb|ACN14785.1| SucD3 [Desulfobacterium autotrophicum HRM2] Length = 708 Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 107/280 (38%), Gaps = 21/280 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + + ++PK + V +T+V + + +++ Sbjct: 23 GKVGHDIFANILFGGFKGTIYPVNPK------AKSIIGVKCYTSVTNIPD--PIDLAMVI 74 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPG 131 +PP A +A+ E I + +V ++ G + ++KA ++ RL+GPNC G Sbjct: 75 LPPKLALNAVKECIAKGVKGVVIVSAGFKEVRGEGAEIEEQIKAVCRAANIRLVGPNCLG 134 Query: 132 ILTP--DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 ++ P D + G+V +S+SG L + + +G G S + IG Sbjct: 135 VINPSPDVSLNASFSSRMPTAGNVSFISQSGALCTAVLDFAADKGFGFSKFISIGNKA-- 192 Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP 249 + +D+L + D T+ +++ E EE +++ P++ +G + Sbjct: 193 DVDELDLLRYYHKDPNTDVVMIYMEELSRGAEEFISEVREMTSGVNPTPVIAIKSGTSVA 252 Query: 250 PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 ++G + ++GI + + Sbjct: 253 GAAAAASHTGALAGSDAIYDS---IFFQSGIVRCHTVNEL 289 >gi|159487889|ref|XP_001701955.1| ATP citrate lyase, subunit B [Chlamydomonas reinhardtii] gi|158281174|gb|EDP06930.1| ATP citrate lyase, subunit B [Chlamydomonas reinhardtii] Length = 534 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 111/302 (36%), Gaps = 67/302 (22%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPKKGSTY----WTGGNVNVP 57 L +K T+ + K + V + P + + + +P Sbjct: 5 LFNKETQAIFFNYKEKPVQRMLDFDFVCGRETPSVAALVTPGSSGGFQKLFFGKNEIAIP 64 Query: 58 VFTTVAE-AKERTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 V+ ++AE ++ A+ + Y A ++ ++++ A + +I I EG+P D + A Sbjct: 65 VYGSIAEATRKHPKADVFINYASFRSAYESSLQALNSATLRVIAIIAEGVPEKDTKHLIA 124 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ +IGP G + + KIG I+ + R GSVG +S+SG ++ E Sbjct: 125 VARANNKVIIGPATVGGVQAGAFKIGDTAGTLDNIVACKLHRPGSVGFVSKSGGMSNEMY 184 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 A + IV++GE+GG+ E + + Sbjct: 185 NHI---------------------------------PAIKMIVVLGELGGADEYGLVEAI 211 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAG--ICIAPS 285 K KP+V +V+G A ++ + + + AG + A Sbjct: 212 KA---GAVTKPVVAWVSGTCAKLVKSE-------------VQSVYDRLVAAGTLVPAADV 255 Query: 286 PA 287 PA Sbjct: 256 PA 257 >gi|222444971|ref|ZP_03607486.1| hypothetical protein METSMIALI_00587 [Methanobrevibacter smithii DSM 2375] gi|261350455|ref|ZP_05975872.1| acetate--CoA ligase [Methanobrevibacter smithii DSM 2374] gi|222434536|gb|EEE41701.1| hypothetical protein METSMIALI_00587 [Methanobrevibacter smithii DSM 2375] gi|288861238|gb|EFC93536.1| acetate--CoA ligase [Methanobrevibacter smithii DSM 2374] Length = 698 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 104/279 (37%), Gaps = 25/279 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + I V I+PK G + + + + E+ + ++ Sbjct: 23 GKVGYIIIDNIISGGYKGKVYPINPKSG------EIQGLKAYENIKDVPEK--VDLVIMS 74 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPG 131 +P + ++I + EA + +V I+ G + K A ++ +IGPN G Sbjct: 75 IPAAFVNESIKDCGEAGVENMVVISAGFKEIGEEGAKLEEELVALSKEYGINIIGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 I + + KG++ +S+SG + + + G+G S + +G G Sbjct: 135 ITDSHTPLNSSFAQMMPPKGNIAFISQSGAMMVALLDWSLTSGIGFSKVISLGNKA--GV 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG-KTAPP 250 +++ D T I+ E + F+K + KKPIV +G A Sbjct: 193 SETELMNYLAEDPETAVIICYLESISDDD----NFVKAMRQTTAKKPIVVLKSGSSNAGA 248 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 H GA+ G A +++GI S A + Sbjct: 249 EAASSHTGALA----GSDLAFDTAFEQSGILRVSSMAEL 283 >gi|85716128|ref|ZP_01047104.1| hypothetical protein NB311A_11130 [Nitrobacter sp. Nb-311A] gi|85697127|gb|EAQ35009.1| hypothetical protein NB311A_11130 [Nitrobacter sp. Nb-311A] Length = 883 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 49/234 (20%), Positives = 91/234 (38%), Gaps = 13/234 (5%) Query: 60 TTVAEAKERT-AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD---MVRVKA 115 +TV E ++ P + + + E+ V I+ G+ + Sbjct: 44 STVKRLAELPFVPELVIVTTPAATVPEIVAEAGRIGSAGAVIISAGLGQGTGSLAEAAER 103 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 RLIGPNC GIL P + R G++ ++S+SG + + ++ + Sbjct: 104 AARAHHMRLIGPNCLGILMPTIDLNASFAAHMPRAGNLALISQSGAIATGMIEWAARRNV 163 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S + +G + D+L+ F D T++I+M E A ++A +F+ R Sbjct: 164 GFSGIISVGDQ--LDVDVADLLDFFALDTETKAILMYIE----AVKDARKFMSAARAAAR 217 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KP+V +G+ A + ++G + A + AGI + Sbjct: 218 VKPVVVVKSGRMAQGAKAAATHTGALAGSDAVYD---AAFRRAGILRVFDLREL 268 >gi|269987073|gb|EEZ93347.1| CoA-binding domain protein [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 683 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 97/256 (37%), Gaps = 19/256 (7%) Query: 49 WTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL 108 + + + +V KE+ + ++I +P + E +A+IPL V ++ G + Sbjct: 46 FVDELQGLKAYKSVLSVKEK--IDVAIIAIPAQMVLSTLKECEKAKIPLAVILSAGFNEI 103 Query: 109 DMVRVKA------RLEKSSSRLIGPNCPGILTPDSCKIGIM--PGSIFRKGSVGILSRSG 160 K L K+ R+IGPNC GI+ D P S KG+ G +S+SG Sbjct: 104 GGEGAKREEEIRKFLSKAKIRIIGPNCLGIINTDPSFNATFLDPNSRVIKGNAGFISQSG 163 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 L V S +G S + IG D++E F DE T+ + + E + Sbjct: 164 ALLSAVVDDASTNNIGFSKIISIGNA--TDISEADIIESFKTDEKTKVLALYLEGLNNG- 220 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 FLK ++KP++ GK + ++ G + A G Sbjct: 221 ---KDFLKAGMSFSQEKPLLILKGGKFKSTSTAVSSHTGSMA---GDYKAYELAFNRIGA 274 Query: 281 CIAPSPARIGRSLVEL 296 + + + + Sbjct: 275 ISVENIDDLFNFMRDA 290 >gi|148643531|ref|YP_001274044.1| acyl-CoA synthetase [Methanobrevibacter smithii ATCC 35061] gi|148552548|gb|ABQ87676.1| acyl-CoA synthetase [Methanobrevibacter smithii ATCC 35061] Length = 698 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 104/279 (37%), Gaps = 25/279 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + I V I+PK G + + + + E+ + ++ Sbjct: 23 GKVGYIIIDNIISGGYKGKVYPINPKSG------EIQGLKAYENIKDVPEK--VDLVIMS 74 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPG 131 +P + ++I + EA + +V I+ G + K A ++ +IGPN G Sbjct: 75 IPAAFVNESIKDCGEAGVENMVVISAGFKEIGEEGAKLEEELVALSKEYGINIIGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 I + + KG++ +S+SG + + + G+G S + +G G Sbjct: 135 ITDSHTPLNSSFAQMMPPKGNIAFISQSGAMMVALLDWSLTSGIGFSKVISLGNKA--GV 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG-KTAPP 250 +++ D T I+ E + F+K + KKPIV +G A Sbjct: 193 SETELMNYLAEDPETAVIICYLESISDDD----NFVKAMRQTTAKKPIVVLKSGSSNAGA 248 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 H GA+ G A +++GI S A + Sbjct: 249 EAASSHTGALA----GSDLAFDTAFEQSGILRVSSMAEL 283 >gi|68068033|ref|XP_675930.1| acetyl CoA synthetase [Plasmodium berghei strain ANKA] gi|56495386|emb|CAH94920.1| acetyl CoA synthetase, putative [Plasmodium berghei] Length = 713 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 104/238 (43%), Gaps = 18/238 (7%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK---- 114 + ++ + K+ + +V+ VP + E + ++ IT G +K Sbjct: 90 YKSLKDIKDDF-IHLAVVAVPRDYVLKTMEELKYKNVRGVIIITAGFKETGEDGLKLEKK 148 Query: 115 --ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + ++ R+IGPNC GI+ S KG ++S+SG + A+ + Q Sbjct: 149 IIDIAKNNNIRIIGPNCLGIIHSYHNMNASFADSEILKGHFSLISQSGAICSAALDLSLQ 208 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 +G S + +G + +F +++E D+ T+ I++ E G + +F++ + Sbjct: 209 HNIGFSHFISVGS--MCDVQFYELIEYLFYDDNTKYILLYVESIG----DMNRFMETCKR 262 Query: 233 RGRKKPIVGFVAGKTAPPG-RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KPI+ +GKTA + H G+++ G E +MK+ G+ +A + + Sbjct: 263 ICLYKPIIVLKSGKTAKAAEAAISHTGSMV----GNYEIFYASMKKLGVLVAENFEEL 316 >gi|315231649|ref|YP_004072085.1| succinyl-CoA ligase subunit alpha [Thermococcus barophilus MP] gi|315184677|gb|ADT84862.1| archaeal succinyl-CoA ligase {ADP-forming} alpha chain [Thermococcus barophilus MP] Length = 463 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 91/250 (36%), Gaps = 20/250 (8%) Query: 44 KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE 103 KG V+ ++ E + + +VI +P D I E + + + I+ Sbjct: 46 KGGE-IEINGQRFKVYRSILEIPDE--VDVAVIAIPAKFVPDVIDECGQKGVKGAIVISA 102 Query: 104 GIPVLDMVR----VKARLEKSSSRLIGPNCPGILTPDSCK--IGIMPGSIFRK--GSVGI 155 G + R K R++GPNC G+ ++ P R G + Sbjct: 103 GFKEAGRADLEEELVKRARKWGIRIVGPNCLGVTNLENGFDCNFNPPERQARPKFGGIAF 162 Query: 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEI 215 +S+SG + ++ +G S + +G + + D + D T+ I E Sbjct: 163 MSQSGAFGAAILDWAAKHNVGMSKFISLGN--MADLDESDFMSYLKDDPKTKVITAYLE- 219 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 ++ +F K + + KP++ AG+T + ++G E A Sbjct: 220 ---GVKDGRKFFKIARETTKAKPVIILKAGRTEAGAKAAASHTGSLAGSYAIYE---AAF 273 Query: 276 KEAGICIAPS 285 ++ G+ A S Sbjct: 274 EQTGVLSAKS 283 >gi|154150457|ref|YP_001404075.1| CoA-binding domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153999009|gb|ABS55432.1| CoA-binding domain protein [Methanoregula boonei 6A8] Length = 687 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 103/266 (38%), Gaps = 22/266 (8%) Query: 27 QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA 86 A+++ G ++P + + T++ + +VI VP Sbjct: 256 YAVMHNLLHFPGQLYPVNNKR---PEIQGLKAYPTISAIPA--PVDMAVITVPAVNVPAV 310 Query: 87 IIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKI 140 + E + ++V IT G + RV + R+IGPNC G++ P Sbjct: 311 VEECGAKGVSMVVIITAGFKEMGPEGKALEDRVVQIAKGHGIRIIGPNCLGLIVPPRGID 370 Query: 141 GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 + G++ LS+SG + V + + +G S + +G +FID L Sbjct: 371 TTYVHQSPKPGNIAFLSQSGAIINTVVDWSLAQNIGFSNVISVGNQ--CDLDFIDYLRYV 428 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAV 260 D T++I+M E + F++ ++ + KP++ +G R A + Sbjct: 429 EKDPKTKAIIMYIE----QINDGKTFMEVVSEVAQSKPVIAIKSG----SSRRGSAAASS 480 Query: 261 ISGG-KGGAEDKINAMKEAGICIAPS 285 +G G E + A +++G+ + Sbjct: 481 HTGSLSGSYEVYMEAFRKSGVIAVHT 506 >gi|13475504|ref|NP_107068.1| hypothetical protein mlr6591 [Mesorhizobium loti MAFF303099] gi|14026256|dbj|BAB52854.1| mlr6591 [Mesorhizobium loti MAFF303099] Length = 893 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 108/293 (36%), Gaps = 32/293 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V + G +G+ G+ + ++ W P ++ VA + Sbjct: 15 VAIFGASGRDGSV--------GRVVFDNIVNGGFEGEIWPVN----PKYSQVAGRRCYAG 62 Query: 71 -------ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR--VKARLEKSS 121 + VI PP + E + V IT G+ + +R + + + Sbjct: 63 VADLPDIPDLGVIVTPPDTVPGIVRELGDKGTRAAVVITAGLTRENGLRQAMLDAAKPTL 122 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R+IGPN G++ P + G++ +LS+SG + + +G S V Sbjct: 123 FRIIGPNTVGLMIPPVKLNAGFAHMAAKPGNIALLSQSGAIATSLIDWAGDNNVGFSQIV 182 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G + + D L++ D T +IVM E +F+ R KP++ Sbjct: 183 SLG--DMADVDVGDCLDMLAGDMHTHAIVMYLETI----PNPRKFMSAARAAARLKPVIV 236 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSL 293 +G+ + A A +G GA+ + A++ AGI A + ++ Sbjct: 237 IKSGRHEQAAK----AAATHTGALSGADRVVDAALRRAGILRVEGLAELFDAV 285 >gi|15668770|ref|NP_247570.1| hypothetical protein MJ_0590 [Methanocaldococcus jannaschii DSM 2661] gi|2496062|sp|Q58010|Y590_METJA RecName: Full=Uncharacterized protein MJ0590 gi|1591298|gb|AAB98580.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 704 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 65/272 (23%), Positives = 105/272 (38%), Gaps = 19/272 (6%) Query: 27 QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA 86 AI+ G I+P + + +V + + +VI VP Sbjct: 31 YAIMKNLKDFNGKIYPINPKY---DEIFGIKCYKSVLDV--EDDIDLAVIVVPNIVVPKV 85 Query: 87 IIESIEAEIPLIVCITEGIPVLDMV----RVKARLEKSSSRLIGPNCPGILTPDSCKIGI 142 + E + + V IT G + ++K ++ + R+IGPNC GI+ Sbjct: 86 LEECGKKGVKGAVIITAGFSEVGNYELENKIKEIAKRYNIRIIGPNCLGIMNTHINLNAT 145 Query: 143 MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA 202 KG V I+S+SG + + +G S V IG + D+LE FL Sbjct: 146 FAKVFPPKGGVSIISQSGAVLNAILDIAPLLNIGFSKVVSIGNKA--DIQESDLLEYFLD 203 Query: 203 DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 DE T+ +V+ E +FLK K +KKPI+ +G+T + ++ Sbjct: 204 DEDTKIVVLYIEGLKDK-----RFLKVAKKLSKKKPIIALKSGRTEVGKKAAKSHTGSLA 258 Query: 263 GGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 G E A KEAGI A + + + Sbjct: 259 GEDVIYE---AAFKEAGIIRAYTFEELVDLIH 287 >gi|154151162|ref|YP_001404780.1| CoA-binding domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153999714|gb|ABS56137.1| CoA-binding domain protein [Methanoregula boonei 6A8] Length = 694 Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 110/279 (39%), Gaps = 21/279 (7%) Query: 27 QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA 86 AI G ++P + G P + + + +A VI +P +G Sbjct: 257 YAICRNMLAFPGALYPVNPGSADILGKTAYPSLSAIPDRV-----DAVVIAIPAAGVPAI 311 Query: 87 IIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKI 140 + E+ + +IPL V ++ G + +V A K R++GPNC G + P Sbjct: 312 VEEAGKKKIPLAVIVSSGFREIGPAGKVLEDQVLAAARKYGIRVMGPNCLGFMLPAQGIN 371 Query: 141 GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 R GS+ +S+SG + V + E +G S + +G F D + Sbjct: 372 TTFDPVSPRAGSIAFVSQSGAIITTIVDWSLPEEIGFSAVISVGNQ--LDLTFEDFVAWT 429 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAV 260 +D AT +I++ E + +FL ++ KP++ +G + + Sbjct: 430 GSDPATNAIILYVE----EIRDGRRFLDVVSRITPTKPVIVIKSGSSEIGQKAASSHTGS 485 Query: 261 ISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++G G + A +EAG+ S ++ ELL S Sbjct: 486 LAGSAG---VYLAAFREAGMIPVRSIREAFQA-AELLAS 520 >gi|83593139|ref|YP_426891.1| N-acetyltransferase [Rhodospirillum rubrum ATCC 11170] gi|83576053|gb|ABC22604.1| N-acetyltransferase [Rhodospirillum rubrum ATCC 11170] Length = 913 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 96/286 (33%), Gaps = 30/286 (10%) Query: 21 GTFHTEQAILYCQTQVVGGIHPK---KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + + ++PK G ++PV A + +++ Sbjct: 41 GHLVMRNLLSGGFGGPIMPVNPKYQAVGGVLAYADVASLPV-----------APDLAIVC 89 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA-------RLEKSSSRLIGPNCP 130 PP A+ E + + +TEG+ ++ + R++GPN Sbjct: 90 SPPDSVPMAVAELGDRGTKACIVMTEGLSRAREAGGRSLQQATLDAARRHMVRVLGPNSV 149 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G+L P G +S+SG L + G+G S V +G Sbjct: 150 GLLVPALGLNASFSHQPALPGKAAFISQSGALCTAVLDWAKGRGIGFSHFVSLGDKA--D 207 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 +F D ++ A ++++ E +A +F+ R KP++ +G+ Sbjct: 208 VDFGDAVDYLGAQPDVRAVLLYIETLT----DARKFMSAARSAARNKPVIVIKSGRGEEG 263 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 R ++G + A K AG+ S + ++ + Sbjct: 264 ARAAASHTGNLAGTDSIHDI---AFKRAGMLRVYSLEELFSAVETI 306 >gi|288959531|ref|YP_003449872.1| GCN5-related N-acetyltransferase [Azospirillum sp. B510] gi|288911839|dbj|BAI73328.1| GCN5-related N-acetyltransferase [Azospirillum sp. B510] Length = 898 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 93/273 (34%), Gaps = 19/273 (6%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G G V ++P G + TV + VI Sbjct: 25 GTVGAVVARNLFQAGFDGPVMPVNPT--ERAVEGVLT----YKTVDSLP--ITPDLGVIC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 PP I + ++ +T G+ + + R++GPN G + P Sbjct: 77 TPPDTVAATIDALGKRGTKAVIVMTNGMTADQTQAMLDAAKPHLMRVLGPNSLGAMVPGR 136 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 RKG V ++++S + + G+G S V +G +F D+L Sbjct: 137 GMNASFAPVAPRKGDVALVAQSSMVVTSIADWATSRGIGFSHLVSLGDR--GDVDFGDLL 194 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + +D +I++ E A +F+ R+KP++ AG++ A Sbjct: 195 DYLASDVTVRAILLYIESIT----HARKFMSAARSASRQKPVIVIKAGRSDEAQ----EA 246 Query: 258 GAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 A +G ++ +A + AG+ A + Sbjct: 247 AASHTGALAVSDAVYDAVFRRAGVLRVNDLAEL 279 >gi|258406251|ref|YP_003198993.1| CoA-binding domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257798478|gb|ACV69415.1| CoA-binding domain protein [Desulfohalobium retbaense DSM 5692] Length = 904 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 104/296 (35%), Gaps = 29/296 (9%) Query: 1 MSI-----LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN 55 MS+ L + +V G + + + + G I P G + Sbjct: 1 MSLKNLDALFRPKSVAIV-GASNRPMSIGAVVMHNLLKADFPGPIMPVNPKYRAVSGVLA 59 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------ 109 P + + + +VI PP + E + V ++ + + Sbjct: 60 YPNVSRLPVT-----PDLAVICTPPRTVPGFVEELGKRGAKAAVVMSTDLDTITDREGRT 114 Query: 110 -MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + A + R++GPNC G++ P + + G + +S+S +L+ + Sbjct: 115 LQENMLAAAREYGVRILGPNCLGLIIPGNGLNASFAHTDVLPGRIAFVSQSDSLSQAVLD 174 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 S G+G S V +G +F V++ D T+SI++ E + A F+ Sbjct: 175 WASSRGIGFSHFVSLGDS--SDIDFHGVIDYLGNDPFTKSILLYIEDI----KNARPFMS 228 Query: 229 DEAKRGRKKPIVGFVAGKTA-PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 R KPI+ G+ + HAG + S + A + AG+ Sbjct: 229 AVRSSSRNKPILVIKGGREELGKESRISHAGMLTSHD----DVYDAAFRRAGMLRV 280 >gi|332296249|ref|YP_004438172.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Thermodesulfobium narugense DSM 14796] gi|332179352|gb|AEE15041.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Thermodesulfobium narugense DSM 14796] Length = 702 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 99/264 (37%), Gaps = 22/264 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P + + + +V + + + V +P + E + + Sbjct: 41 YKGNIYPINPKADYI---LGYKCYKSVLDIPD--DLDLVVFVIPSKFVNPVMRECAQKGV 95 Query: 96 PLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 + IT G +K ++ ++ RL+GPN G++ + + + Sbjct: 96 KGAIVITAGFKETGLEGAKLERELKEIVKSNNIRLVGPNVLGLIDTHNSINASFASFMPK 155 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 KG++G +S+SG + + +G S + IG ID+LE+ D T+ I Sbjct: 156 KGNIGFISQSGAFATAIMDWAAANDIGFSKFISIGNKA--DVNEIDLLEVLKDDNDTDVI 213 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA-GKTAPPGRTMGHAGAVISGGKGGA 268 +M E + + F+ K + KPI+ + A H G++ G Sbjct: 214 LMYLE----SIDNGRAFMDIAYKTSKVKPIIVLKSGTTAAGAKAATSHTGSLA----GSD 265 Query: 269 EDKINAMKEAGICIAPSPARIGRS 292 + +A K+ G+ A + + Sbjct: 266 QAYTSAFKQCGVIRASTVEDLFDL 289 >gi|240102798|ref|YP_002959107.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA) [Thermococcus gammatolerans EJ3] gi|239910352|gb|ACS33243.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA) [Thermococcus gammatolerans EJ3] Length = 474 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 113/304 (37%), Gaps = 29/304 (9%) Query: 11 VLVQGLT---GKAGTFHTE-QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 V + G T GK G E + + G I+P V+ +V E Sbjct: 18 VAIIGATNKKGKVGNVIFENFRMNKERGIFKGNIYPVNPK---LDEIEGYKVYHSVEELP 74 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKS 120 + T + +VI +P D + + E I ++ IT G L K + + Sbjct: 75 DDT--DLAVISIPAPFVPDTMRQIAEKGIKAVIIITGGFGELGEEGKKLEREIYEIAKAN 132 Query: 121 SSRLIGPNCPGILTPDSC--KIGIMPGSIFRK--GSVGILSRSGTLTYEAVFQTSQEGLG 176 R+IGPNC G+ PD+ + + + R G + +S+SG + + G+G Sbjct: 133 GIRVIGPNCVGVYVPDTGVDTVFLPESKMDRPQSGPIAFVSQSGAFAAAMLDWAAMAGIG 192 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 V G + D+++ F+ D+ + E ++ +F++ + R Sbjct: 193 IGKMVSYGNK--IDVDDADLMDYFIHDDGINVVTFYIE----GVKDGRKFMESAKRITRV 246 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ +G+T + ++G + K+ GI A + L + Sbjct: 247 KPVIALKSGRTEYGAKAASSHTGSLAGADTIYDAV---FKQTGIIRAEDFEHMFD-LAKA 302 Query: 297 LGSL 300 +L Sbjct: 303 FAAL 306 >gi|332525600|ref|ZP_08401755.1| GCN5-like protein N-acetyltransferase [Rubrivivax benzoatilyticus JA2] gi|332109165|gb|EGJ10088.1| GCN5-like protein N-acetyltransferase [Rubrivivax benzoatilyticus JA2] Length = 885 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 104/286 (36%), Gaps = 28/286 (9%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGI---HPKK---GSTYWTGGNVNVPVFTTVAE 64 V V G + + + + G + +P++ G ++P Sbjct: 7 VAVFGASDRPASLGATVWANAAGSGFEGPVWAVNPRRPVLGGQRAYARAADLP------- 59 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 A +V+ PP + E + + +T G+ V+ R+ Sbjct: 60 ----EAPELAVLCTPPDTVAKLVAELGKRGTRAAIVMTAGLSPGQRRAVQDAARPHLLRV 115 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GP+C G+L P G++ +S+SG L + + G+G S +G Sbjct: 116 LGPDCLGLLNPRLKLNASFAHVTAAPGTLAFVSQSGALVTALLDWAAARGVGFSLFASLG 175 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 +F D+++ +D T +I++ E +A +F+ R KP++ A Sbjct: 176 EQ--LDVDFGDLIDHLASDAHTRAILLYVETVT----DARKFMSAARAAARNKPVLIVKA 229 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARI 289 G+T R A A +G ++ A++ AG+ + + Sbjct: 230 GRTQAGQR----AAASHTGVLATSDLVFDAAIRRAGMLRVQTLQEL 271 >gi|240102276|ref|YP_002958584.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA) [Thermococcus gammatolerans EJ3] gi|239909829|gb|ACS32720.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA) [Thermococcus gammatolerans EJ3] Length = 467 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 104/276 (37%), Gaps = 22/276 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G L + +V ++ K G G V+ ++ E + + +VI Sbjct: 23 GKVGNAIMRSITLRFEGKVYA-VNVKGGEIEVNGKKFK--VYRSIKEIPDE--VDVAVIA 77 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR----VKARLEKSSSRLIGPNCPGIL 133 VP D I E E + + I+ G + R K R++GPNC G+ Sbjct: 78 VPAKFVPDVIDECGEKGVKGAIVISAGFKEAGRADLEEELLKRARKWGIRVVGPNCLGVT 137 Query: 134 TPDSCK--IGIMPGSIFRK--GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 ++ P R G V +S+SG + ++E +G S + +G + Sbjct: 138 NLENGFDCNFNPPERQARPPFGKVAFMSQSGAFGAAILDWAAREKIGMSKFISLGN--MA 195 Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP 249 + D ++ DE T I E ++ +FL+ + KKP+V +G+T Sbjct: 196 DLDESDFMDYLGDDEKTGVITGYLE----GVKDGRKFLETAKRVTLKKPVVILKSGRTEA 251 Query: 250 PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + ++ G A +++G+ A + Sbjct: 252 GAKAAASHTGSLA---GSYAIYRAAFEQSGVLEATT 284 >gi|254173446|ref|ZP_04880119.1| AcdA-5 acetate--coA ligase (ADP-forming) alpha chain [Thermococcus sp. AM4] gi|214032855|gb|EEB73684.1| AcdA-5 acetate--coA ligase (ADP-forming) alpha chain [Thermococcus sp. AM4] Length = 467 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 103/276 (37%), Gaps = 22/276 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G L +V ++ K G G V+ ++ E + + +VI Sbjct: 23 GKVGNAIMRSITLRFNGKVYA-VNVKGGEIEVNGKKFK--VYRSIKEIPDE--IDVAVIA 77 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR----VKARLEKSSSRLIGPNCPGIL 133 VP D I E E + + I+ G + R K R++GPNC G+ Sbjct: 78 VPAKFVPDVIDECGEKGVKGAIVISAGFKEAGRADLEEELVKRARKWGIRVVGPNCLGVT 137 Query: 134 TPDSCK--IGIMPGSIFRK--GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 ++ P R G V +S+SG + ++E +G S + +G + Sbjct: 138 NLENGFDCNFNPPERQARPPFGKVAFMSQSGAFGAAILDWAAREKIGMSKFISLGN--MA 195 Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP 249 + D ++ DE T I E ++ +FL+ + KKP+V +G+T Sbjct: 196 DLDESDFMDYLGDDEKTGVITGYLE----GVKDGRKFLETAKRVTLKKPVVILKSGRTEA 251 Query: 250 PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + ++ G A +++G+ A + Sbjct: 252 GAKAAASHTGSLA---GSYAIYRAAFEQSGVLEATT 284 >gi|18976605|ref|NP_577962.1| hypothetical protein PF0233 [Pyrococcus furiosus DSM 3638] gi|18892170|gb|AAL80357.1| hypothetical protein PF0233 [Pyrococcus furiosus DSM 3638] Length = 465 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 97/268 (36%), Gaps = 24/268 (8%) Query: 29 ILYCQTQVVGGIHP---KKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGD 85 + G ++P K+G G V+ ++ E + + +VI VP D Sbjct: 31 MKSLAANFNGKVYPVNVKEGEIEINGKKFK--VYRSIKEIPDE--VDVAVIAVPAKFVPD 86 Query: 86 AIIESIEAEIPLIVCITEGIPVLDMVR----VKARLEKSSSRLIGPNCPGILTPDSCK-- 139 I E E + + I+ G + R K R++GPNC G+ ++ Sbjct: 87 VIDECGEKGVKGAIVISAGFKEAGRADLEEELVKRARKWGIRVVGPNCLGVTNLENGFDC 146 Query: 140 IGIMPGSIFRK--GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 P R G + +S+SG + ++ +G S + +G + + D + Sbjct: 147 NFNPPERQARPKFGPIAFMSQSGAFGAAILDWAARHEVGMSKFISLGN--MADLDESDFM 204 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 D T+ I E ++ +F + + KP++ AG+T + Sbjct: 205 LYLKDDPKTKVITAYIE----GVKDGRKFFNAAKETTKVKPVIILKAGRTEAGAKAAASH 260 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPS 285 ++ G + A ++ G+ A S Sbjct: 261 TGSLA---GSYKIYQAAFEQTGVLAAKS 285 >gi|332701952|ref|ZP_08422040.1| CoA-binding domain protein [Desulfovibrio africanus str. Walvis Bay] gi|332552101|gb|EGJ49145.1| CoA-binding domain protein [Desulfovibrio africanus str. Walvis Bay] Length = 697 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 101/283 (35%), Gaps = 23/283 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + I + ++PK G +P T+VAE + VI Sbjct: 22 GKIGHTVLKNMIDAGFPGRLIPVNPK------GGEIEGLPAVTSVAELPR--GLDLGVIC 73 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPG 131 +P D++ E + IT G + + L+GPNC G Sbjct: 74 IPRQFVLDSLRELAAIGARAAIVITAGFKEVGRSGYHLEQEMAGIAREHGMALLGPNCLG 133 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ + + GS+ S+SG L + + G+G S+ V +G V Sbjct: 134 LIDTAARVNATFATGKPQPGSIAFFSQSGALCVAILDWAAGAGVGFSSFVSLGNKAV--L 191 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 + D+L+ D+ T I+ E ++ FL + R KP++ +G TA Sbjct: 192 DEADMLQWLGRDDKTRVILGYLENV----QDGQTFLARATEVTRNKPVIMLKSGTTAAGA 247 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 R I+G + A +AGI A + + Sbjct: 248 RAASSHTGAIAGSD---QAYGAAFHKAGIIRAERVSELFDLAR 287 >gi|270208663|ref|YP_003329434.1| hypothetical protein pSmeSM11ap136 [Sinorhizobium meliloti] gi|76880937|gb|ABA56107.1| conserved hypothetical protein [Sinorhizobium meliloti] Length = 899 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 109/297 (36%), Gaps = 24/297 (8%) Query: 1 MSIL-----VDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN 55 MSI +D + ++ G + + G+ G I P G+ Sbjct: 1 MSIRNLHLAIDPRSVAII-GASDRDGSLGRVVIENVIGAGFEGEIWPINPKHNQVAGHR- 58 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR--V 113 + VA+ + +VI P I E V IT GI +R + Sbjct: 59 --CYRRVADVP--GVPDLAVIVTPALTVPTVIHELGIKGTRAAVIITAGISADKALRQAM 114 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + R++GPN G++ P + + G + +LS+SG +T + + Sbjct: 115 LDAAKPFLLRVVGPNTVGLIVPSAKLNASFAHLQAQPGGIALLSQSGAITTSLIDWAADN 174 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G S + +G + + D L+LF D T +I+M E S +FL Sbjct: 175 NVGFSKIISLG--DMADADAGDFLDLFAGDPETHAIIMYLETISSP----RKFLAAARAA 228 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARI 289 R KP+V AG+ + A A +G GA+ + A+ AGI + Sbjct: 229 ARVKPVVAIKAGRHTEAAK----AAATHTGALSGADRVVDAALHRAGILRIEGLGEL 281 >gi|91787102|ref|YP_548054.1| CoA-binding [Polaromonas sp. JS666] gi|91696327|gb|ABE43156.1| CoA-binding protein [Polaromonas sp. JS666] Length = 903 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 105/305 (34%), Gaps = 37/305 (12%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNV---PVFTTVAEAKE 67 V V G + + G+ + G + P + +V P + V + Sbjct: 15 VAVIGASDREGSLGSVVLRNLKLGGFKGPVWP------VNHRHASVDGGPAWPDVESLPQ 68 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV---------------LDMVR 112 + +V+ P I + + +T G+ Sbjct: 69 AP--DLAVVCTPAHTVPALIADLGRKGTRAAIVLTAGLKQPAAEGGSAGGLSGGLSLEQA 126 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + R++GPNC G L P + G + +++SG L + + Sbjct: 127 MLDAARPHLLRILGPNCIGALVPGVGLNASFAPGNAQPGRLAFVTQSGALATAMLDWANS 186 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+G S + +G +F DV++ +D T +I+M E + + A +F+ Sbjct: 187 RGVGFSHFISLGDSA--DVDFGDVIDYLASDGGTRAILMYAE----SIKAARKFMSAARA 240 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGR 291 R KP++ AG+ R A A +G G++ A++ AG+ + + Sbjct: 241 ASRNKPVIVVKAGRAPDGAR----AAASHTGALAGSDAVFDAAIRRAGMLRVDTLESLFD 296 Query: 292 SLVEL 296 + L Sbjct: 297 AAETL 301 >gi|325968247|ref|YP_004244439.1| CoA-binding protein [Vulcanisaeta moutnovskia 768-28] gi|323707450|gb|ADY00937.1| CoA-binding domain protein [Vulcanisaeta moutnovskia 768-28] Length = 484 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 59/309 (19%), Positives = 120/309 (38%), Gaps = 31/309 (10%) Query: 3 ILVDKNTKVLVQGLTGKA---GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVF 59 +L + + ++ G T + G T+ + + +V ++PK + + Sbjct: 26 LLFNPKSVAII-GATPRENSVGGVITKNLLTRFKGKVY-LVNPK------YDEVNGIKYY 77 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK----- 114 ++ + ++ + +VI VP E I+ + +++ I+ G + K Sbjct: 78 KSILDIQD--NIDLAVIAVPAPAVPKVADECIKKGVRIVIIISGGFSEVGEDGAKLEEEL 135 Query: 115 ARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 R+ ++ R++GPNC G+ D+ + + G V ++S+SG + + Sbjct: 136 RRVVQNRIRVLGPNCIGVYNAFNGLDTFFLPEDRMGRPKPGPVALISQSGAVAGAILDWA 195 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 ++ +G AV G ++LE F D + IVM E E + L+ Sbjct: 196 ARRNIGVGLAVNYGNK--LDINESELLEYFAKDNRVKVIVMYMEGLKY-IGEGKKLLEVM 252 Query: 231 AKRGRKKPIVGFVAGK-TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + KPIV + AG+ A G H A+ G E +++A + A + Sbjct: 253 KEVSSVKPIVTYKAGRTKAATGAVKSHTAALA----GNYEIYHAMLRQANVIEADNLTD- 307 Query: 290 GRSLVELLG 298 + + L Sbjct: 308 AFDMAKALA 316 >gi|147669618|ref|YP_001214436.1| CoA-binding domain-containing protein [Dehalococcoides sp. BAV1] gi|146270566|gb|ABQ17558.1| CoA-binding domain protein [Dehalococcoides sp. BAV1] Length = 375 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 110/295 (37%), Gaps = 24/295 (8%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + + + LV G T K G+ + + ++P + + + T+ Sbjct: 6 LFFNPKSVALV-GATDKEGSTGKIILQNLIKGKDRRAVYPVNPNRE---SVLEQKCYPTL 61 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKAR 116 + E VP I ++ + ++ I+ G + ++ Sbjct: 62 KDLPEVPDLVLV--VVPAKFVPQVIEDAGKVGTKSVIIISAGFKEVGSEGKALEEKIAEI 119 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMP-GSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 ++ R+IGPNC G ++P S + + G+V LS+SG L + + Sbjct: 120 AKQYGIRIIGPNCMGTMSPASGFNATFARMEMPKTGNVAFLSQSGALGSAVLDWAIARNV 179 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S IG + F D+++ F DE T+SI++ E G EA +F+ R Sbjct: 180 GFSGFASIGS--MMDVNFGDLIDYFGTDENTKSIIVYLETMG----EAKKFMSAARGFAR 233 Query: 236 KKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KPI+ G+ + H G+++ G A + AG+ + + Sbjct: 234 TKPIIVIKPGRFEESAQAAKSHTGSMV----GNAMFVDAIFQRAGVVRVDNIGDL 284 >gi|218886868|ref|YP_002436189.1| GCN5-related N-acetyltransferase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757822|gb|ACL08721.1| GCN5-related N-acetyltransferase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 898 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 86/233 (36%), Gaps = 16/233 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-------PVLDMVRVKARLEKSSSR 123 + ++I PP I E + V ++ G + + ++ R Sbjct: 71 PDLAIICSPPETIPGYIEELGKRGTRAAVIMSRGFFRFDRERREVQKAALLQAAQRWGVR 130 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPNC G +TP + G V LS+S +L + + +G+G S + + Sbjct: 131 VLGPNCLGFITPSVGVNASLAPREALPGKVAFLSQSDSLFTSVLDWATSKGIGFSHFIAL 190 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G F DVL+ D T ++++ E S A +F+ R KP++ Sbjct: 191 GDR--YDVHFNDVLDYLNGDVNTRAVLLYIETIDS----ARRFMSAARALARNKPVLVIK 244 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 AG++ ++ G + A + AG+ + ++ L Sbjct: 245 AGRSEAAAAAAAAHSGMLLGADEVYD---AAFRRAGMLRVADIDAMFDTVETL 294 >gi|257094819|ref|YP_003168460.1| CoA-binding domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047343|gb|ACV36531.1| CoA-binding domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 896 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 92/241 (38%), Gaps = 17/241 (7%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----- 109 V + ++ E R +V+ P I + + + + IT G Sbjct: 57 GVQAYKSIEEISAR--VELAVVVTRPQTVPKIIEQCGRSGVKNAIVITSGFAEAGHSGAA 114 Query: 110 -MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ RL+GPNC GI+ P+ G + ++S+SG + + Sbjct: 115 LERKMMEIARSYGVRLLGPNCLGIIRPNLGLNATFARVHANIGHLALVSQSGAICSAVLD 174 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + +G S+ + +GG +F ++L+ + D T I++ E +A +F+ Sbjct: 175 WATSNRIGFSSVISLGGTA--DVDFGEILDYLIYDNLTHYILLYVE----GIRDARRFMS 228 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 R KPIV AG+ A + + +G E A++ AG+ + + Sbjct: 229 ALRSAARIKPIVLLKAGRHAGGLAAVETHSGMAAGSDIVFE---AAVRRAGVVRVKNIGQ 285 Query: 289 I 289 + Sbjct: 286 L 286 >gi|289193036|ref|YP_003458977.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanocaldococcus sp. FS406-22] gi|288939486|gb|ADC70241.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Methanocaldococcus sp. FS406-22] Length = 699 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 70/286 (24%), Positives = 108/286 (37%), Gaps = 21/286 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + G AI+ G I+P + + +V + Sbjct: 12 VAVIGASKTEGKV--GYAIMKNLKDFNGKIYPINPKY---DEIFGIKCYKSVLDV--EDD 64 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----RVKARLEKSSSRLIG 126 + +VI VP + E E + V IT G + ++K + + R+IG Sbjct: 65 IDLAVIVVPNIVVPKVLEECGEKGVKGAVIITAGFSEVGNYELEEKIKEIAKIYNIRVIG 124 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNC GI+ KG V I+S+SG + + +G S V IG Sbjct: 125 PNCLGIMNTHINLNATFAKVFPPKGGVSIISQSGAVLNAILDIAPLLNIGFSKVVSIGNK 184 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + D+LE FL DE T+ +V+ E +FLK K +KKPI+ +G+ Sbjct: 185 A--DIQESDLLEYFLDDEDTKIVVLYIEGLKDK-----RFLKVAKKLSKKKPIIALKSGR 237 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 T + ++G E A KEAGI A + + Sbjct: 238 TEVGKKAAKSHTGSLAGEDVIYE---AAFKEAGIIRAYTFEELVDL 280 >gi|332535506|ref|ZP_08411284.1| protein acetyltransferase [Pseudoalteromonas haloplanktis ANT/505] gi|332035083|gb|EGI71599.1| protein acetyltransferase [Pseudoalteromonas haloplanktis ANT/505] Length = 889 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 110/297 (37%), Gaps = 26/297 (8%) Query: 1 MSI-----LVDKNTKVLVQ--GLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN 53 MS+ + ++ ++ ++ +AG + + + P + + Sbjct: 1 MSLKRITQFFNPSSVAVIGASNVSTRAGFVVMRNLLQGGFKGPIMPVTP-----SHSAVH 55 Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV 113 + + ++A+ + + +VI + D I + E + I +G+ + Sbjct: 56 GVL-AYPSIADLPKVP--DLAVICTNKNTLIDIIEQLGELGCKTAIVIADGLSGEQKSAL 112 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 KA + L+GPNC G+L P ++ G + +S+S + + + Sbjct: 113 KACAQAKQVTLLGPNCLGLLIPHIGLNASFSHTVASPGKIAFVSQSAAVCSTILDWAKNK 172 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G S V +G F ++L+ D T++I++ + E+ F+ Sbjct: 173 EIGFSYFVSVG--DCLDINFNELLDFLGRDAKTKAILLYIDNI----EDIRGFISAARAA 226 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 KP++ GKT A + +GGK ++ +A + AG+ + Sbjct: 227 AFSKPVIAIKTGKTTAGAL----AAEIHTGGKQSSDAVYDALFQRAGMLRVNDLREL 279 >gi|242399938|ref|YP_002995363.1| Succinyl-coa synthetase alpha subunit related protein [Thermococcus sibiricus MM 739] gi|242266332|gb|ACS91014.1| Succinyl-coa synthetase alpha subunit related protein [Thermococcus sibiricus MM 739] Length = 462 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 108/283 (38%), Gaps = 22/283 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + K G G I+P + + + +V E + + Sbjct: 12 VAVIGASNKEGKIGNAIMKNLINFGFKGRIYPVNVKEE---KVLGIKAYKSVLEIPD--S 66 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIG 126 + +VI +P + E + + V I+ G V ++ +L K + R++G Sbjct: 67 VDVAVISIPGRFVPQILEECGQKGVKGAVVISAGFKEAGNVELENKLLEVARKWNIRIVG 126 Query: 127 PNCPGILTPDSCKIGIM--PGSIFRK--GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 PNC G+ ++ P R G + +S+SG + ++ +G S + Sbjct: 127 PNCLGVTNIENGFDCTFNPPERQARPEFGGIAFMSQSGAFGAAILDWAARHEVGMSKFIS 186 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + D +E D+AT+ I E ++ +FLK +KKP+V Sbjct: 187 LGN--MADLDESDFMEYLKDDKATKVITAYLE----GVKDGKKFLKAARDATKKKPVVIL 240 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 +G+T + ++G + A ++ G+ A S Sbjct: 241 KSGRTEAGAKAAASHTGSLAGSYAIYQ---AAFEQTGVLEARS 280 >gi|154271826|ref|XP_001536766.1| hypothetical protein HCAG_08548 [Ajellomyces capsulatus NAm1] gi|150409436|gb|EDN04886.1| hypothetical protein HCAG_08548 [Ajellomyces capsulatus NAm1] Length = 138 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 48/103 (46%), Positives = 64/103 (62%), Gaps = 5/103 (4%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +TKV+ QG TGK GTFH +QAI Y T VVGG +PKK G PVF T Sbjct: 36 NLRINSDTKVIYQGFTGKQGTFHAQQAIDY-GTNVVGGTNPKKAGQTHLGK----PVFAT 90 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEG 104 V +A + T A AS I+VPP A +I E+IE+E+PL+V Sbjct: 91 VRDAVKETGATASAIFVPPPLAAKSIEEAIESEVPLVVWFVPH 133 >gi|119470555|ref|ZP_01613258.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding protein [Alteromonadales bacterium TW-7] gi|119446256|gb|EAW27533.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding protein [Alteromonadales bacterium TW-7] Length = 889 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 57/290 (19%), Positives = 106/290 (36%), Gaps = 17/290 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 +S + ++ V V G + A Q G I P S G + P Sbjct: 6 ISQFFNPSS-VAVIGASNNASRAGFVVMRNLLQGGFKGPIMPVTPSYSAVHGVLAYPCIN 64 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS 120 + + + +VI + D I + E + I +G+ +KA K Sbjct: 65 DLPKV-----PDLAVICTNKNTLFDIISQLGELGCKSAIIIADGLTNDQKSALKACAHKH 119 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 + L+GPN G+L P ++ G + +S+S + + + +G S Sbjct: 120 NVTLLGPNSLGLLIPHIGLNASFSHTVASPGKIAFVSQSAAVCSTILDWAKNKDIGFSYF 179 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 V +GG +F ++L+ D T++I++ + E+ F+ KP++ Sbjct: 180 VSVGG--CLDIDFDELLDFLGRDSKTKAILLYIDNI----EDIRGFISAARAAAFSKPVI 233 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 GKT A + SGGK ++ +A + AG+ + Sbjct: 234 AIKTGKT----NAGALAAEIHSGGKQSSDAVYDALFQRAGMLRVNDLREL 279 >gi|288931856|ref|YP_003435916.1| CoA-binding protein [Ferroglobus placidus DSM 10642] gi|288894104|gb|ADC65641.1| CoA-binding domain protein [Ferroglobus placidus DSM 10642] Length = 440 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 21/258 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P G + + V+ +V E + + +VI VP D + + + + Sbjct: 36 FKGKVYPINPK---GGEILGLKVYKSVLEVPDE--IDLAVIIVPAKLVPDVMEDLGKKGV 90 Query: 96 PLIVCITEGIPVLDMV----RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 V IT G +V + R++GPNC GI P I KG Sbjct: 91 KNAVIITGGFREAGNEELEEKVVEIARRYGIRIVGPNCQGINNTHHNFCASWPL-ITMKG 149 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 + I S+SGT+ + ++G+G ST V +G + +DV+ F D+ TE I + Sbjct: 150 KIAIASQSGTVAAALAEWSQRDGIGFSTFVSLGNKA--DVDEVDVINFFSEDKNTEVIAL 207 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDK 271 E + +F++ K KKPIV G T + + ++G + Sbjct: 208 YIE----GVRDGRKFMEAAKKS--KKPIVVLKPGVTERGAKAVQSHTKSMAGRNEVFD-- 259 Query: 272 INAMKEAGICIAPSPARI 289 A K++G+ A + + Sbjct: 260 -AACKQSGVIRAENLEEL 276 >gi|119774895|ref|YP_927635.1| acetyltransferase [Shewanella amazonensis SB2B] gi|119767395|gb|ABL99965.1| acetyltransferase, GNAT family [Shewanella amazonensis SB2B] Length = 911 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 108/286 (37%), Gaps = 26/286 (9%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +AG + + + + + PK + V + ++ + + ++I Sbjct: 26 RAGNVVMKNLLAGGFSGPIMPVTPK------YQAVMGVLAYPSIEALPIKP--DLAIICT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLD-------MVRVKARLEKSSSRLIGPNCPG 131 S + + + + + G+ + A ++ R++GPN G Sbjct: 78 RASRVPGIVETLAQFGCKVAIIMASGMANEMDGEGQSLLATTLANAKRYGMRILGPNSLG 137 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P+ + + + G + +S+S + + + +G+G S+ + +G Sbjct: 138 MMLPNLGLNASLAHTSAQPGKIAFVSQSAAVCTTVLDWANNKGIGFSSFISLG--DATDI 195 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F ++L+ D T +I++ + A E FL R KPI+ +G++ Sbjct: 196 DFDELLDFLGRDGRTSAIMLYMD----AINEKRHFLSAARAAARNKPILVIKSGRSQEGA 251 Query: 252 RTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVEL 296 R A + +GG G++ A + AG+ + +L L Sbjct: 252 R----AAKLHTGGVSGSDAVYEAAFRRAGMLRVNDLVEMFAALESL 293 >gi|88859157|ref|ZP_01133798.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding protein [Pseudoalteromonas tunicata D2] gi|88819383|gb|EAR29197.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding protein [Pseudoalteromonas tunicata D2] Length = 889 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 107/298 (35%), Gaps = 28/298 (9%) Query: 1 MSI-----LVDKNTKVLVQ--GLTGKAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGG 52 MS+ + ++ ++ T +AG + + + PK K Sbjct: 1 MSVKRISQFFNPSSVAVIGASNQTNRAGFVVMRNLLQGGFNGPIMPVTPKYKAVHGVLA- 59 Query: 53 NVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR 112 + T+A + + +++ + + I E E + I G Sbjct: 60 ------YPTIAALPQIP--DLAILCTNKHLSINLIKELGEKGCKHAILIASGFKTEQKQA 111 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + A ++ L+GPNC G+L P +I G + +S+S + + Sbjct: 112 LIATAKEYGVSLLGPNCLGLLIPSIGLNASFSHTIASPGKLAFISQSAAVCSTILDWAQN 171 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 +G+G S V +G +F ++++ D T++I++ + + A F+ Sbjct: 172 KGIGFSYFVSMG--DCCDLDFHELIDFLGRDPKTQAILLYIDNIAN----ARSFISAARA 225 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 KPI+ GKTA + +GG+ A+ +A + AG+ + Sbjct: 226 AAVNKPIIAIKTGKTALGAAAA----TLHTGGQTSADAVYDAMFQRAGMLRVNDLREL 279 >gi|46581373|ref|YP_012181.1| acetyltransferase [Desulfovibrio vulgaris str. Hildenborough] gi|120601450|ref|YP_965850.1| GCN5-related N-acetyltransferase [Desulfovibrio vulgaris DP4] gi|46450795|gb|AAS97441.1| acetyltransferase, GNAT family [Desulfovibrio vulgaris str. Hildenborough] gi|120561679|gb|ABM27423.1| GCN5-related N-acetyltransferase [Desulfovibrio vulgaris DP4] gi|311235031|gb|ADP87885.1| GCN5-related N-acetyltransferase [Desulfovibrio vulgaris RCH1] Length = 898 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 105/297 (35%), Gaps = 21/297 (7%) Query: 7 KNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 K T V+V G T T +G + P + G T+ Sbjct: 11 KPTSVVVVGATADENTPGNRIMRNLLAGTFLGPVLPVNDTGEAVAGMPGHTAIDTLPLT- 69 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-------PVLDMVRVKARLEK 119 + ++I PP + I E + +V +++G + V + Sbjct: 70 ----PDLAIICSPPESVAEHIAELGKRGTRAVVVLSQGFYRYDGERREVQRNAVLQAARR 125 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R++GPNC G ++P + G V +S+S +L + + + +G S Sbjct: 126 HGVRVLGPNCLGFVSPAVGINASLMPRKALPGKVAFVSQSDSLFSTVLDWATSKKIGFSH 185 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + +G F D+L+ +D T ++++ E ++A +F+ R KP+ Sbjct: 186 CIALGDR--YDIHFHDILDYLNSDVNTRAVLLYLETI----DKARRFMSAARALARNKPV 239 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + +G++A + G + A + AG+ + ++ L Sbjct: 240 LVVKSGRSAEGAAAAAAHSGM---PLGADDVYDAAFRRAGMLRVADIDTLFNAVEAL 293 >gi|156740102|ref|YP_001430231.1| acetyl coenzyme A synthetase subunit alpha [Roseiflexus castenholzii DSM 13941] gi|156231430|gb|ABU56213.1| Acetyl coenzyme A synthetase (ADP forming) alpha domain [Roseiflexus castenholzii DSM 13941] Length = 698 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 106/278 (38%), Gaps = 22/278 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 K G + + + +HP + P + +V + E + +VI Sbjct: 21 TKLGHRILKNILDAGYPGRIFPVHPG------ASHILGFPAYPSVEQVPE--PVDLAVIV 72 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPG 131 VP + + A + +V I+ G + +++ +++ R+IGPNC G Sbjct: 73 VPATVVPNVAEACGRAGVKGLVVISAGFKEVGPEGRALEMQLLEIVQRYGMRMIGPNCLG 132 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 I+ + G + +S+SG L + + +G+G S V +G Sbjct: 133 IIDTITRLNASFAALYPHPGQIAFMSQSGALCTAILDWSKAQGIGFSRFVSLGNKA--DV 190 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 + + +LE + D + V++ + G +A F+ + ++ P++ +G T Sbjct: 191 DEVTLLEAWGCD-QANNRVILAYLEGIGNGDA--FVAVARRVTKRIPVIAIKSGATQAGA 247 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 R ++G + E A ++G+ A S + Sbjct: 248 RAASSHTGALAGAEHACE---AAFDQSGVLRARSMQEL 282 >gi|11498537|ref|NP_069765.1| hypothetical protein AF0932 [Archaeoglobus fulgidus DSM 4304] gi|2649664|gb|AAB90306.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 666 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 103/251 (41%), Gaps = 24/251 (9%) Query: 52 GNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV 111 + + + +V E + +++ VP DA+ E+ EA + +V I+ G ++ Sbjct: 265 EILGLKAYPSVKSLPEVP--DIAIVTVPAEFVLDAVREAAEAGVKGVVIISSGFKEAEVE 322 Query: 112 RVKAR-------LEKSSSRLIGPNCPGILTPDSCKIGIMPG--SIFRKGSVGILSRSGTL 162 K R K R++GPN GI++ S +KG + ++S+SG + Sbjct: 323 EGKVREERLREIARKYGIRIVGPNTFGIVSVVGGINASFTPMFSEVKKGRIALVSQSGGI 382 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 + + + G S + +G +F DV+ DE T+ + + E + Sbjct: 383 CHYIIHKFRDS--GFSHILHLGNR--CDVDFPDVMRFLREDENTDVVAVYVE----GIDN 434 Query: 223 AAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGIC 281 ++ + +K +V +G+++ + H G++ G +AMK+AG Sbjct: 435 GRGLFEELKRLCSEKKVVVMKSGRSSVADKASVSHTGSMA----GDYRVFASAMKQAGAV 490 Query: 282 IAPSPARIGRS 292 + +P + + Sbjct: 491 VVETPTELIDT 501 >gi|153872224|ref|ZP_02001177.1| GCN5-related N-acetyltransferase [Beggiatoa sp. PS] gi|152071310|gb|EDN68823.1| GCN5-related N-acetyltransferase [Beggiatoa sp. PS] Length = 882 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 99/268 (36%), Gaps = 21/268 (7%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P + P ++ + ++I P + I E + Sbjct: 26 YKGNLYPINPKYEKIQDHTAYPSIRDISGQ----PVDLAIIITPAKTVPNIIEVCGEYGV 81 Query: 96 PLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 + I+ + K A + R +GPN GI+ P S + Sbjct: 82 KTAIIISSSFSEIGKQGAKLEKKVLANARRFGLRFLGPNSLGIMRPLIDLNATFTNSSAK 141 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 G + ++S+SG L + +G S+ + IG +F ++L+ ++D T I Sbjct: 142 SGHLALVSQSGALCSAILDWACPNDVGFSSIISIGTSA--DLDFGEILDYLVSDPQTHGI 199 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT-MGHAGAVISGGKGGA 268 ++ E +A F+ R KP++ G+ T M H+G I G+ A Sbjct: 200 LLYIEDI----HQARSFMSGLRAAARMKPVIVIKTGRHENVFNTVMSHSGTQI--GRDDA 253 Query: 269 EDKINAMKEAGICIAPSPARIGRSLVEL 296 D A++ AG+ + A++ + L Sbjct: 254 FD--AALQRAGVVRVSTFAQLFSAAKTL 279 >gi|288930684|ref|YP_003434744.1| CoA-binding protein [Ferroglobus placidus DSM 10642] gi|288892932|gb|ADC64469.1| CoA-binding domain protein [Ferroglobus placidus DSM 10642] Length = 459 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 123/291 (42%), Gaps = 30/291 (10%) Query: 11 VLVQGLT--GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKER 68 V V G T K FH +++ + ++P + V + +V + E Sbjct: 15 VAVIGATKNPKKMGFHALNSLVKTFKGKIYAVNPN------YDEILGVKAYRSVKDLPE- 67 Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------VKARLEKSS 121 + +++ VP +++ E +E V I+ G ++ +K ++ + Sbjct: 68 -TPDLAILAVPRDAIYNSVRELLEKGCRAFVIISAGFREAEIADGEELHKKLKELVDSYN 126 Query: 122 SRLIGPNCPGILTPDSCKIGIM--PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +IGPN G++ + S+ +KG + ++S+SG + + + +EG+G S Sbjct: 127 AVVIGPNTFGMVNLKADLNASFTPALSLLKKGDIALISQSGGVCHLIAPYSMREGIGFSK 186 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 VG+G +F D+LE D+ T+SI + E +E + + + R KP+ Sbjct: 187 IVGLGNR--LNVDFHDMLEYLKDDKETKSIALYIE----GIDEPKKLCEKIREVSRVKPV 240 Query: 240 VGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 V AG+ + H G++ G + ++A+K+ G IA + Sbjct: 241 VAMKAGRFEKADKASKSHTGSMA----GNYKLYVSALKQHGAVIAEDLIEL 287 >gi|14591671|ref|NP_143758.1| hypothetical protein PH1928 [Pyrococcus horikoshii OT3] gi|3258372|dbj|BAA31055.1| 466aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 466 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 95/255 (37%), Gaps = 21/255 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++ K G G V+ ++ + ++ + +VI VP + I E E + + Sbjct: 45 AVNVKGGEIEVNGKKFK--VYKSIKDVPDK--VDVAVIAVPAKFVPEVIDECGEKGVKGV 100 Query: 99 VCITEGIPVLDMVR----VKARLEKSSSRLIGPNCPGILTPDSCK--IGIMPGSIFRK-- 150 V I+ G + R +K R++GPNC G+ ++ P R Sbjct: 101 VVISAGFKEAGRADLEEELVKRAKKWGIRVVGPNCLGVTNLENGFDCNFNPPERQARPKF 160 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G + +S+SG + ++ +G S + +G + + D + D T+ I Sbjct: 161 GPIAFMSQSGAFGAAILDWAARHEVGMSKFISLGN--MADLDESDFMLYLKNDPKTKVIT 218 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 E ++ +F + + KP++ AG+T + ++G E Sbjct: 219 AYIE----GVKDGKKFFNVAKETTKVKPVIVLKAGRTEAGAKAAASHTGSLAGSYRIYEA 274 Query: 271 KINAMKEAGICIAPS 285 ++ GI A S Sbjct: 275 V---FEQTGILAAKS 286 >gi|16554478|ref|NP_444202.1| Acetyl-CoA synthetase [Halobacterium sp. NRC-1] gi|169235787|ref|YP_001688987.1| acyl-CoA synthetase ( acetate--CoA ligase (ADP-forming)) [Halobacterium salinarum R1] gi|167726853|emb|CAP13639.1| acyl-CoA synthetase (homolog to acetate--CoA ligase (ADP-forming)) [Halobacterium salinarum R1] Length = 700 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 109/300 (36%), Gaps = 26/300 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTF-HTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 L + +V V G T + G L V ++P + + P + + Sbjct: 10 LFTPD-RVAVVGATDRDGAIGRAIIDNLSDFDNDVIAVNPGR------DDVLGYPCYPDL 62 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL------DMVRVKAR 116 + + +V+ VPP DA+ ++ +A + +V IT G + A Sbjct: 63 G---DAPPVDLAVVVVPPQIVVDAVRDAGQAGVENVVVITAGFSETGGDGADRERDLVAV 119 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + L+GPN G+L+ + S G++ +S+SG + + +G+G Sbjct: 120 ADDYDINLVGPNSLGLLSTPTGLNATFGPSNALPGNLSFMSQSGAFITAVLDWANDQGIG 179 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 +G V D ++ + D T I+ E ++ +F+ D + + Sbjct: 180 FKDIASLGNKAVLSET--DFMQAWADDPDTNVILGYLE----GVDDGREFIDDAREVTQD 233 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 P V +G+T + I+G + E K+AG+ A + + L Sbjct: 234 TPAVVVKSGRTEAGAQAASSHTGTIAGSEAAYE---AGFKQAGVVRAENVQELFDFARAL 290 >gi|323700156|ref|ZP_08112068.1| CoA-binding domain protein [Desulfovibrio sp. ND132] gi|323460088|gb|EGB15953.1| CoA-binding domain protein [Desulfovibrio desulfuricans ND132] Length = 702 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 94/262 (35%), Gaps = 23/262 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P G + + + + A+ + +I +P A+ + +A + I Sbjct: 47 PVNPA------GGEILGLTAYPSTADLPR--PPDLGIIALPREQVLQAMRDLADARVDAI 98 Query: 99 VCITEGIPVLDM------VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 IT G + + + L+GPN G+ + ++ KGS Sbjct: 99 CVITAGFRETGRDGFELEMEMADLARRRDITLLGPNTLGLFNTAINLNASIAQTMPAKGS 158 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 + S+SG L + E +G S V +G G DVLE D T+ I+ Sbjct: 159 ISFFSQSGALCSAILDWAEGESIGFSKFVSLGNKA--GVSEADVLEALGDDPDTKVIIGY 216 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 E ++ +FL KKP++ AG TA R ++ G E + Sbjct: 217 LESV----DDGRRFLTRARAVTEKKPVIMIKAGTTAAGARATSSHTGSLA---GSVEAGL 269 Query: 273 NAMKEAGICIAPSPARIGRSLV 294 A K+AGI S + Sbjct: 270 AAFKQAGIIRVESLETLFDLAR 291 >gi|83311656|ref|YP_421920.1| hypothetical protein amb2557 [Magnetospirillum magneticum AMB-1] gi|82946497|dbj|BAE51361.1| Hypothetical protein yfiQ [Magnetospirillum magneticum AMB-1] Length = 903 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 93/246 (37%), Gaps = 20/246 (8%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-------PVLDMV 111 + VA + + ++I PP+ + E +T G+ + Sbjct: 60 YPDVACLPKAP--DLALICTPPATIPGILHTLGERGTKAACIMTGGLHLIQGEGGSTMLE 117 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + + RL+GPN GIL P G + +S+SG L + Sbjct: 118 QAMEVARQYDMRLLGPNSMGILVPGIGLNASSSHENVLPGKLAFVSQSGALCTAVLDWAR 177 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +G S + +G +G +F DVL+ +D +T +I++ E + E F+ Sbjct: 178 AREIGFSHFIHLG--DTEGVDFGDVLDYLGSDPSTRAILLYME----SIHERRNFMSAAR 231 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIG 290 R KP++ AG++ R A A +G G++ AM+ AG+ I Sbjct: 232 AAARNKPVLAIKAGRSREGAR----AAASHTGALAGSDLVFDAAMRRAGMLRVKDIEEIF 287 Query: 291 RSLVEL 296 ++ L Sbjct: 288 GAVETL 293 >gi|323702698|ref|ZP_08114359.1| CoA-binding domain protein [Desulfotomaculum nigrificans DSM 574] gi|323532361|gb|EGB22239.1| CoA-binding domain protein [Desulfotomaculum nigrificans DSM 574] Length = 701 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 99/281 (35%), Gaps = 23/281 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+ G + I Y T + + G + TV + + + +VI Sbjct: 23 GELGNVVLKNVIGYGFTGGIFPVT--SAEQEIEGIIC----YKTVRDIPAQ--VDLAVIC 74 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI----PVLDMVRVK--ARLEKSSSRLIGPNCPG 131 V + E + I IV ++ G P + K + K ++GPNC G Sbjct: 75 VSAPNCPAVVEECGQVGIKNIVVVSGGFKEIGPEGLELEKKLLSACHKYGISMVGPNCVG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 I+ +G + +S+S + + + LG S +G+G Sbjct: 135 IMNTHVPVNASCSSVFPYQGDIAFISQSSAMLTSIIDWSKSNHLGFSQVIGLGNKAH--L 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 + D +E D T+ I+ E + + FL+ + ++KP++ +G + Sbjct: 193 DEADFIEAIAKDPMTKVILCYIEDVNNGKH----FLEVVTRVAKQKPVIILKSGSSQAGA 248 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 + + ++G E A +AGI A S + Sbjct: 249 QAVSSHTGELAGSDLAYET---AFTQAGILRARSMTELFDL 286 >gi|254171864|ref|ZP_04878540.1| acetyl-CoA synthase [Thermococcus sp. AM4] gi|214033760|gb|EEB74586.1| acetyl-CoA synthase [Thermococcus sp. AM4] Length = 473 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 58/304 (19%), Positives = 111/304 (36%), Gaps = 29/304 (9%) Query: 11 VLVQGLT---GKAGTFHTE-QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 V + G T GK G E + + G ++P V+ +V E Sbjct: 18 VAIIGATNKKGKVGNVIFENFKMNKERGIFKGKVYPVNPK---LDEIDGYRVYHSVKELP 74 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKS 120 + T + +VI +P + + E I ++ IT G L K + + Sbjct: 75 DDT--DLAVISIPAPYVPATMRDIAEKGIKAVIIITGGFGELGEEGKKLEREIYEIAKAN 132 Query: 121 SSRLIGPNCPGILTPDSCK--IGIMPGSIFRK--GSVGILSRSGTLTYEAVFQTSQEGLG 176 R+IGPNC G+ PD+ + + + R G + +S+SG + + G+G Sbjct: 133 GIRVIGPNCVGVYVPDTGVDTVFLPESKMDRPESGPIAFVSQSGAFAAAMLDWAAGAGIG 192 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 V G + D+++ F+ D+ + E ++ +F++ + R Sbjct: 193 IGKMVSYGNK--LDVDDADLMDYFIHDDEINVVTFYIE----GVKDGRKFMESAKRITRV 246 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ +G+T + ++G + K+ GI A + L + Sbjct: 247 KPVIALKSGRTEYGAKAASSHTGSLAGADTIYDAV---FKQTGIIRAEDFEHMFD-LAKA 302 Query: 297 LGSL 300 L Sbjct: 303 FAQL 306 >gi|308271260|emb|CBX27869.1| Uncharacterized protein MJ0590 [uncultured Desulfobacterium sp.] Length = 729 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 102/282 (36%), Gaps = 36/282 (12%) Query: 36 VVGGIHPKKGSTYW-------TGGNVNVPV------------FTTVAEAKERTAANASVI 76 + P K V PV + ++ E + + ++I Sbjct: 25 IGASTTPGKVGHDIFANILKGGFAGVLYPVNPSAKSILCVRAYPSLNEIPDE--VDLAII 82 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCP 130 +PP+ A A E+IE ++ +V ++ G + + + K R+IGPNC Sbjct: 83 ILPPAVAIKAAHEAIEKKVKGLVIVSAGFREVGGKGLEIENEIVSVCRKEGIRIIGPNCL 142 Query: 131 GILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 G++ P+ + + G++ +S+SG L + + G S + IG Sbjct: 143 GVINPNPLVRLNASFSVRMPKFGNISFISQSGALCTAVLDFAADMDFGFSKFISIGNKA- 201 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT- 247 + +D+L+ D TE I++ E E K + PI+ +G+T Sbjct: 202 -DVDELDLLKYLHKDLDTEVIMIYLEELRRGPEFIEDVKKITLGNIKPTPIIAIKSGRTG 260 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 A H GA+ G +++GI S + Sbjct: 261 AGALAAASHTGALA----GTEAVYDAIFQQSGIIRVDSIHEL 298 >gi|271966183|ref|YP_003340379.1| acyl-CoA synthetase (NDP forming)-like protein [Streptosporangium roseum DSM 43021] gi|270509358|gb|ACZ87636.1| Acyl-CoA synthetase (NDP forming)-like protein [Streptosporangium roseum DSM 43021] Length = 883 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 93/258 (36%), Gaps = 18/258 (6%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P +PV+ V + +VI P + + + Sbjct: 223 FPGPVYPINP---HARQICGLPVYANVGSVP--GPIDLAVIATPARTVPEIARDCAGHGV 277 Query: 96 PLIVCITEGIPVLD----MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 +V +T G + ++ RL+GPNC GI+ + G Sbjct: 278 RNVVVVTSGFAETGGTSAQDELLRICREAGMRLVGPNCLGIVNTAARLNAGFLPHPPAPG 337 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 + ++S+SG + + + + +G S+ +G D+LE + D AT+ I + Sbjct: 338 RLALMSQSGAVAVALIDRANHLEIGISSFASVGNKA--DVSGNDLLEYWEDDPATDVITL 395 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDK 271 E G+ +F + + R+KPI+ +G+ R + A + + Sbjct: 396 YLESFGNP----RRFGRIARRVSRRKPIIAIKSGRGGSGERAVRSHTAAAATPDVAVDAL 451 Query: 272 INAMKEAGICIAPSPARI 289 +K +G+ + + Sbjct: 452 ---LKASGVIRVETVRDM 466 >gi|312139423|ref|YP_004006759.1| gnat acetyltransferase [Rhodococcus equi 103S] gi|325672688|ref|ZP_08152384.1| GNAT family acetyltransferase [Rhodococcus equi ATCC 33707] gi|311888762|emb|CBH48074.1| putative GNAT acetyltransferase [Rhodococcus equi 103S] gi|325556565|gb|EGD26231.1| GNAT family acetyltransferase [Rhodococcus equi ATCC 33707] Length = 898 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 100/264 (37%), Gaps = 27/264 (10%) Query: 35 QVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE 94 G ++P V + TV + + + +V+ VP + + + Sbjct: 244 NFSGPVYPVNAEHR---SVRGVRAYPTVRDIPD--DVDLAVVAVPAESIDAVLDDCLAKG 298 Query: 95 IPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDS--CKIGIMPGS 146 + +V ++ G R+ RLIGPN G+ D + Sbjct: 299 VKALVVVSAGFGETGPDGRDSERRLVHAARAHGMRLIGPNALGVANNDVAVSLNATLAPV 358 Query: 147 IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 + + G VG +SG L + Q ++ LG ST V G D+L+ + D T Sbjct: 359 LPKPGRVGFFCQSGALGIAILDQAAKRHLGLSTFVSAGNRA--DVSGNDLLQYWDTDPDT 416 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKG 266 E +++ E G+ +F + + R KPIV +G+ A P A+ + G Sbjct: 417 EVVLLYLESFGNP----RKFSRIARRVARNKPIVAVKSGRHAVP-------PALAATGVE 465 Query: 267 GAEDKINA-MKEAGICIAPSPARI 289 + + + ++AG+ S +++ Sbjct: 466 MDDSIVRSLFEQAGVVQVGSISQL 489 >gi|212224150|ref|YP_002307386.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus onnurineus NA1] gi|212009107|gb|ACJ16489.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus onnurineus NA1] Length = 472 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 111/304 (36%), Gaps = 29/304 (9%) Query: 11 VLVQGLT---GKAGTFHTE-QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 V + G T GK G E + + G I+P V+ +V E Sbjct: 18 VAIIGATNKKGKVGNVIFENFKMNKERGIFKGNIYPVNPK---LDEIDGYKVYKSVEELP 74 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKS 120 + T + +VI +P D + + + I ++ IT G L K ++ Sbjct: 75 DDT--DLAVISIPAPFVPDTMRQIAKKGIKAVIIITGGFGELGEEGKKLEREILEIAREN 132 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSI----FRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 R+IGPNC G+ PD+ + + G + +S+SG + + +G Sbjct: 133 GIRIIGPNCVGVYVPDTGVDTVFLPENKMDRPKSGPIAFVSQSGAFAAAMLDWAAMADIG 192 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 V G + D+++ F+ D++ + E ++ +F++ + + Sbjct: 193 IGKMVSYGNK--LDVDDADLMDYFIHDDSINVVTFYIE----GVKDGRKFMEAARRITKV 246 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ +G+T + ++G + K+ G+ A + L + Sbjct: 247 KPVIALKSGRTEYGAKAASSHTGSLAGADTIYDAV---FKQTGVIRAEDFEHMFD-LAKA 302 Query: 297 LGSL 300 +L Sbjct: 303 FAAL 306 >gi|71908331|ref|YP_285918.1| GCN5-related N-acetyltransferase:CoA-binding [Dechloromonas aromatica RCB] gi|71847952|gb|AAZ47448.1| GCN5-related N-acetyltransferase:CoA-binding protein [Dechloromonas aromatica RCB] Length = 905 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 19/238 (7%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVR 112 + ++ E R +VI P I + + + ++ I G + Sbjct: 61 YKSIEEIGAR--VEMAVIATRPQTVPQLIEQCGRSGVRNVIVIASGFSEAGHIGAALERK 118 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 V + R++GPNC GI+ PD + G++ ++S+SG + + Sbjct: 119 VLEIARSYNVRILGPNCLGIIRPDLGLNATFSKTTAAPGNLALVSQSGAMCSAVLDWAKS 178 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 +G S+ + IG +F ++L+ + D T I+M E + +F+ Sbjct: 179 NQVGFSSVISIG--MTADVDFGEILDYLIYDSRTHYILMYVE----GIRNSRRFMSALRS 232 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARI 289 R KPI+ AG+ A A SG ++ A++ AG+ + ++ Sbjct: 233 AARIKPIILLKAGRHEAGAM----ATATHSGMAAVSDSVFDAAVRRAGVVRVQNVGQL 286 >gi|307596479|ref|YP_003902796.1| CoA-binding domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307551680|gb|ADN51745.1| CoA-binding domain protein [Vulcanisaeta distributa DSM 14429] Length = 485 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 117/309 (37%), Gaps = 31/309 (10%) Query: 3 ILVDKNTKVLVQGLTGKA---GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVF 59 +L + + ++ G T + G T+ + + +V ++PK + + Sbjct: 27 LLFNPRSVAII-GATPRENSVGGVITKNLLTKFKGKVY-LVNPK------YDEVNGIKYY 78 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK----- 114 ++ + ++ + +VI VP E + + + I+ G + K Sbjct: 79 KSILDIQD--NIDLAVIVVPAPAVPKVADECARKGVKVAIIISGGFSEVGEEGAKLEEEL 136 Query: 115 ARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 ++ ++ R++GPNC G+ D+ + + G V ++S+SG + + Sbjct: 137 RKVVQNRIRVLGPNCIGVYNAFNGLDTFFLPEDRMGRPKPGPVALISQSGAVAGAILDWA 196 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 ++ +G AV G ++LE F D + IVM E E + L+ Sbjct: 197 ARRNIGVGLAVNYGNK--LDINEAELLEYFARDSRVKVIVMYMEGLKYPGE-GKKLLEVM 253 Query: 231 AKRGRKKPIVGFVAGK-TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + KP+V + AG+ A G H A+ G E +++A + A + Sbjct: 254 KEVSSVKPLVVYKAGRTRAATGAVKSHTAALA----GNYEIYRAMLRQANVIEADNLTD- 308 Query: 290 GRSLVELLG 298 + + L Sbjct: 309 AFDMAKALA 317 >gi|226366206|ref|YP_002783989.1| acetate--CoA ligase [Rhodococcus opacus B4] gi|226244696|dbj|BAH55044.1| putative acetate--CoA ligase [Rhodococcus opacus B4] Length = 891 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 104/263 (39%), Gaps = 27/263 (10%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P G V + TV + + + +V+ VP + + ++ + Sbjct: 240 FTGPVYPVNAEHRSVHG---VRAYPTVRDIPDE--VDLAVVAVPAESINAVLDDCLDKGV 294 Query: 96 PLIVCITEGIPVLDM------VRVKARLEKSSSRLIGPNCPGILTPDS--CKIGIMPGSI 147 +V ++ G M R+ RLIGPN G+ D + + Sbjct: 295 KALVVVSSGFSETGMDGRQSERRLVHAARAHGMRLIGPNALGVANNDRDVSLNATLAPVL 354 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 G+VG +SG L + + ++ +G S V G D+L+ + +D ATE Sbjct: 355 PSPGNVGFFCQSGALGIAILDEAARSRIGLSAFVSAGNRA--DVSGNDLLQYWDSDPATE 412 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 +++ E G+ +F + + R KPIV +G+ A P A+ + G Sbjct: 413 VVLLYLESFGNP----RKFSRIARRVARNKPIVAVKSGRHAVP-------PALAASGGEM 461 Query: 268 AEDKINA-MKEAGICIAPSPARI 289 + + A ++AG+ S +++ Sbjct: 462 DDSIVRALFEQAGVVQVGSISQL 484 >gi|328953425|ref|YP_004370759.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109] gi|328453749|gb|AEB09578.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109] Length = 676 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 58/286 (20%), Positives = 102/286 (35%), Gaps = 25/286 (8%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + AG + G I+P + + + + +A Sbjct: 16 VAVIGASTVAGKLGHDILYNLIHAGFPGPIYPINPK---ADQVLGLAAYKQIGDAPSSP- 71 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRL 124 + +VI +P AI + +A + + IT G K + + R+ Sbjct: 72 -DLAVIVIPARAVAGAIEQCGQAGVKGAIVITGGFAEAGEEGEKLQEELAQAARRHNVRV 130 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPNC GI P P + +G++ +S+SGT+ + SQE LG S V +G Sbjct: 131 IGPNCQGINNPHHNLCASWPL-LTTRGAMAFISQSGTVGAALMDWASQELLGVSVFVSLG 189 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + D ++ F D T+ I + E + KP+V A Sbjct: 190 NRA--DIDEADAIQYFNQDPHTKVIALYIEGVKRPVYFLDALAEA------TKPVVILKA 241 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 G+T + A + G + +A ++ + A + + Sbjct: 242 GRT----KQGRLAAESHTKSLAGQDAVYDAIFRKYKVHRAETIEEL 283 >gi|301059526|ref|ZP_07200439.1| putative acetyl coenzyme A synthetase (ADP forming), alpha domain protein [delta proteobacterium NaphS2] gi|300446421|gb|EFK10273.1| putative acetyl coenzyme A synthetase (ADP forming), alpha domain protein [delta proteobacterium NaphS2] Length = 895 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 95/242 (39%), Gaps = 18/242 (7%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKAR 116 + K + + +VI P +G + I E ++ + + ++ G + +R+ Sbjct: 62 SILKMKRPVDLAVIATPIAGVPEIIRECVKCSVASAIVLSAGGKEIGEKGRELELRILKE 121 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 K R+IGPNC GI++ + G + +S+SG + + + QEG+G Sbjct: 122 AAKGGLRIIGPNCMGIVSSGVRLNASFASIMPLPGKMAFISQSGAICGAILDLSIQEGIG 181 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S V IG + +F D++ D +SIV+ E +F+ R Sbjct: 182 FSHFVSIGS--MLDVDFGDLINYLGDDSDVKSIVLYIESLT----NVRKFMGAARAISRV 235 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI---GRSL 293 KPIV +G++ ++G + A K AG+ + + + + Sbjct: 236 KPIVLLKSGRSRAGAAAASSHTGALAGEDAIYD---AAFKRAGVQRVNTISELFDCAELM 292 Query: 294 VE 295 + Sbjct: 293 AK 294 >gi|74205208|dbj|BAE23135.1| unnamed protein product [Mus musculus] Length = 436 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 6/142 (4%) Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 ++ E S+ G V IGGD G+ F+D + + + IV++GEIGG+ E Sbjct: 1 MSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEY 60 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEA 278 + + +K+ KP+V + G A GHAGA + A K A+KEA Sbjct: 61 KICRGIKEGR---LTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEA 117 Query: 279 GICIAPSPARIGRSLVELLGSL 300 G+ + S +G + + L Sbjct: 118 GVFVPRSFDELGEIIQSVYEDL 139 >gi|322369639|ref|ZP_08044203.1| acetyl-CoA synthetase [Haladaptatus paucihalophilus DX253] gi|320550809|gb|EFW92459.1| acetyl-CoA synthetase [Haladaptatus paucihalophilus DX253] Length = 700 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 102/291 (35%), Gaps = 30/291 (10%) Query: 9 TKVLVQGLTGKAGTF----HTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 ++V V G T G+ T + V ++P + + +A Sbjct: 13 SRVAVVGATENEGSIGRAIVTNLRDEFDGETV--PVNPN------YDEVFGLDCYPDLAS 64 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLE 118 + +V+ VPP A D + + EA I +V IT G ++ Sbjct: 65 ---APDIDLAVVVVPPHIAVDVVRGAGEAGIKNVVVITAGFGETGSEGAERERELQDIAA 121 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + L+GPN GI++ GS+ +S+SG + + EGLG Sbjct: 122 EYDLNLVGPNSLGIMSTPVGMNATFGPENALPGSMSFMSQSGAFITAVLDWANDEGLGFK 181 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V +G V D + + D T+ I+ E E+ F+ + P Sbjct: 182 DVVSLGNKAVLDET--DFVRAWGEDPDTDVILGYLE----GVEDGGTFIDTAREVTDDTP 235 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 IV +G+T + + ++G E +++AG+ S + Sbjct: 236 IVMVKSGRTDAGAQAVSSHTGTLAGSDRAYE---AGLEQAGVLRVDSVQEL 283 >gi|158523073|ref|YP_001530943.1| CoA-binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158511899|gb|ABW68866.1| CoA-binding domain protein [Desulfococcus oleovorans Hxd3] Length = 711 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 101/278 (36%), Gaps = 30/278 (10%) Query: 37 VGGIHPKKGST---------YWTGGNVNV-PVFTTVAEAKERT-------AANASVIYVP 79 P K + G V P ++ K A + ++I +P Sbjct: 17 GASTTPGKVGHDLFENILRGRFNGTLYPVNPKADSILCVKAYPSLLEVPDAVDLAMIILP 76 Query: 80 PSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGIL 133 P AI + IE ++ +V ++ G + V A K+ R++GPNC G++ Sbjct: 77 PKATLAAIHDCIEKKVKGVVIVSAGFREVGGEGKQIEESVAALCRKAGIRVVGPNCLGVI 136 Query: 134 TPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 P+S + +G++ +S+SG L + S G+G S + G Sbjct: 137 NPNSKVRLNASFSRRMPSQGNISFISQSGALCTAVLDFASDMGVGFSKFISTGNKA--DV 194 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 + +D+L D AT+ I+M E +E ++ PI+ +G+T Sbjct: 195 DELDLLTYLHKDPATDVIMMYIEELKRGGQEFVDAVRKITSCKNPTPILAIKSGRTGAGA 254 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 I+G +G + E GI S + Sbjct: 255 AAASSHTGSIAGSEGVYD---AIFAETGIIRVDSVNEL 289 >gi|218884157|ref|YP_002428539.1| Acetyl-CoA synthetase [Desulfurococcus kamchatkensis 1221n] gi|218765773|gb|ACL11172.1| Acetyl-CoA synthetase [Desulfurococcus kamchatkensis 1221n] Length = 471 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 104/286 (36%), Gaps = 20/286 (6%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G Y V I+P + + ++ + + + +++ Sbjct: 31 GKIGYIVLRNIKGYGFQGKVYPINP------HADEILGYKAYPSILDVPDE--VDVAIVT 82 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR----LEKSSSRLIGPNCPGIL 133 VP + I ES + + V IT G + V ++ + K R++GPN G + Sbjct: 83 VPADNVPEVIEESGRKGVKVAVVITSGFSEVGNVELENKIVETARKYGMRILGPNIFGYV 142 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 S +GS+ ++S+SG L + T +G S + +G + + Sbjct: 143 YTPSNINATFGPLEVARGSIALISQSGALGIALMGWTIMNEIGLSALLSVGN--MADLDV 200 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 ++ E D T I + E +F+K + KKP+V AG++ Sbjct: 201 AELSEYLADDPNTRVITIYLEGIKPGR--GGEFIKKMREVTLKKPVVVIKAGRSRRGAAA 258 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++G E A K+AGI A + + + + + Sbjct: 259 AASHTGSLAGSDNLYE---AAFKQAGIIRAYTVEEMFD-IARVFAA 300 >gi|297538841|ref|YP_003674610.1| CoA-binding domain-containing protein [Methylotenera sp. 301] gi|297258188|gb|ADI30033.1| CoA-binding domain protein [Methylotenera sp. 301] Length = 892 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 100/283 (35%), Gaps = 25/283 (8%) Query: 21 GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPP 80 G + + + I+PK + ++ E E VI P Sbjct: 28 GQVVFQNMLQSGYQGKLYAINPK------HSTVQGYKAYASITEITE--PVELVVIATPA 79 Query: 81 SGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILT 134 D I ++ + + I+ G + RLIGPNC G++ Sbjct: 80 QSVPDIIEACGLNKVKVAIIISAGFGEAGAAGKLLEQSVLEKAHHYGIRLIGPNCLGVMC 139 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 PD G++ +S+SG L + + +G S V +G +F Sbjct: 140 PDIGLNATFNKGNAIAGNIAFISQSGALCTAILDWANANDVGFSNVVSMGAS--VDVDFG 197 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT-APPGRT 253 ++L+ ++D T SI++ E +A F+ R KP++ G+ A Sbjct: 198 EILDYLISDTKTRSILLYIE----GIHDARGFMSSIRAAARIKPVILVKVGRHPAASKAA 253 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + H A++ G + A++ AG+ + ++ + L Sbjct: 254 ISHTSAIV----GSDDAFDAAVRRAGVVRVQTITQLFAAAKAL 292 >gi|171186085|ref|YP_001795004.1| CoA-binding domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170935297|gb|ACB40558.1| CoA-binding domain protein [Thermoproteus neutrophilus V24Sta] Length = 461 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 101/274 (36%), Gaps = 18/274 (6%) Query: 34 TQVVGGIHPKKGST-YWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 T+ G ++P + + +V+E P + E+ Sbjct: 33 TRFRGAVYPVNPKYDEVELWGRKLKFYKSVSEIDATVDVVVV--ATPAPTVPSIVEEAGR 90 Query: 93 AEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGPNCPGILTP----DSCKIGIMP 144 IP V I+ G ++ RL + RL+GPNC G+ D+ + + Sbjct: 91 RGIPAAVVISSGFAEAGNQELEQRLASAARQYGVRLLGPNCIGVYNAFSNFDTLFLPLDR 150 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 G + ++S+SG + + ++ G+G V G ++++E F AD+ Sbjct: 151 AGRPPPGPLALISQSGAVAAAIMDWAARRGIGLGLVVNYGNKA--DVTEVELIEHFAADD 208 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 I + E EAA+FL K KKP+V + AG+ R + A ++ Sbjct: 209 RIRVITIYLEGFKY-RGEAAKFLNAVRKTVPKKPVVVYKAGRGRAAQRAVRSHTAAMA-- 265 Query: 265 KGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G E +AG A S + + + L Sbjct: 266 -GTYEMYKGLFSQAGALEASSVREMFD-MAKALA 297 >gi|329908056|ref|ZP_08274816.1| Protein acetyltransferase [Oxalobacteraceae bacterium IMCC9480] gi|327546789|gb|EGF31723.1| Protein acetyltransferase [Oxalobacteraceae bacterium IMCC9480] Length = 881 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 104/290 (35%), Gaps = 21/290 (7%) Query: 1 MSI-----LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN 55 MSI L + + L+ G T + G+ G I P G + Sbjct: 1 MSIRHLQALFNPASVALI-GATNRPGSIGNAVLHNLVAGGFAGRIMPVNPKHEVLAGLI- 58 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA 115 V+ VA + ++I PP+ + I E ++ ++ + + Sbjct: 59 --VWNDVASLP--VVPDLAIICTPPASVPELIAALGERGCKAVIVMSA-VTTAQREAMLL 113 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 + R++G G+L P G + +S+SG L + + GL Sbjct: 114 AAKPHLLRILGDISAGLLVPAIGLNASFSSGPALPGKLAFVSQSGGLMNGVLDWATTRGL 173 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S + +GG +F D+L+ D AT +I++ E A +F+ R Sbjct: 174 GFSKFISLGGGA--DIDFGDLLDFLAGDPATHAILLFLEDI----RLARKFMSAARSAAR 227 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 KPI+ AG++ R V++ + A++ AG+ S Sbjct: 228 GKPILVIRAGRSGEGQRAGASHTGVLASPDSIYD---AAIRRAGMLRVNS 274 >gi|296109612|ref|YP_003616561.1| CoA-binding domain protein [Methanocaldococcus infernus ME] gi|295434426|gb|ADG13597.1| CoA-binding domain protein [Methanocaldococcus infernus ME] Length = 667 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 113/292 (38%), Gaps = 22/292 (7%) Query: 8 NTKVL-VQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 N K + + G T K G +IL + G ++P G + + ++ + Sbjct: 3 NPKAIAIIGATPKEGK--AGYSILKNLLKFKGKLYPINPKYSEIFG---IKCYKSILDVD 57 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR----LEKSSS 122 ++ + ++I VP + E + + +V I+ G + V ++ + L+K + Sbjct: 58 DK--IDLAIIVVPNVVVPQVLEECGKKGVKYVVIISAGFSEVGNVELENKVRGILKKYNI 115 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R IGPNC G++ KG++ ++S+SG + + +G S V Sbjct: 116 RAIGPNCFGLINAHINLNATFSKVFPEKGNISLISQSGAVIDAILDILPLLNIGVSKVVS 175 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + D+LE+ DE T I + E FLK + +KKPI+ Sbjct: 176 LGNK--IDIQESDILEILKDDEETRVIGIYLESLKDK-----NFLKVAKEVAKKKPIIVL 228 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 AGK+ R ++G E K+ G I + +L Sbjct: 229 KAGKSEAGKRAAKSHTGALAGENELYE---AIFKQCGFIITETFEEFVDALH 277 >gi|315230937|ref|YP_004071373.1| acetyl-CoA synthetase subunit alpha [Thermococcus barophilus MP] gi|315183965|gb|ADT84150.1| acetyl-CoA synthetase (ADP-forming), alpha chain [Thermococcus barophilus MP] Length = 473 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 107/298 (35%), Gaps = 28/298 (9%) Query: 11 VLVQGLT---GKAGTFHTEQAILYCQTQVV-GGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 V + G T GK G E + + G I+P V+ +V E Sbjct: 19 VAIIGATNKKGKVGNVIFENFKRNKEQGIFKGNIYPVNPK---LDEIEGYKVYKSVKELP 75 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKS 120 + T + +VI +P + + E I ++ IT G L + + + Sbjct: 76 KDT--DLAVISIPAPFVPATMKDIAEKGIKAVIIITGGFGELGEEGKRLEREIYEIAKAN 133 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGS----IFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 R+IGPNC G+ PD+ + + G + +S+SG + + G+G Sbjct: 134 GIRVIGPNCVGVYVPDTGVDTVFLPEEKMDRPKSGPIAFVSQSGAFAAAMLDWAALAGIG 193 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 V G + D+++ F+ D+ + + E ++ +F++ + + Sbjct: 194 IGKMVSYGNK--IDVDDADLMDYFIYDDQIKVVTFYIE----GVKDGRKFIEAAKRITKV 247 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KP++ +G+T + ++G + K+ GI A + Sbjct: 248 KPVIALKSGRTEYGAKAASSHTGSLAGADVIYDAV---FKQTGIIRAEDFEHMFDVAK 302 >gi|307594764|ref|YP_003901081.1| CoA-binding domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307549965|gb|ADN50030.1| CoA-binding domain protein [Vulcanisaeta distributa DSM 14429] Length = 464 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 112/297 (37%), Gaps = 28/297 (9%) Query: 4 LVDKNTKVLVQGLTGKAGTF--HTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 L + + ++ G T + G+ + +L V ++P + V+ + Sbjct: 8 LFNPRSIAII-GATAREGSVGGVITRNLLTKFRGRVYLVNPS------YTELLGHRVYRS 60 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV-----LDMVRVKAR 116 V E + + +VI P + E + + V I+ G + R Sbjct: 61 VLEIPDE--VDLAVIVTPAPTVPRIMSECAAKGVKVAVVISGGFSETGEDGARLEREVRE 118 Query: 117 LEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + R++GPNC G+ D+ I R G + ++S+SG + + ++ Sbjct: 119 ASQGRVRILGPNCIGVYNAFNGLDTFFIPQGRMERPRAGPIALISQSGAVAAAILDWAAR 178 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 +G+G AV G +++LE +E +VM E E + L+ + Sbjct: 179 KGIGVGIAVNYGNK--LDISEVELLEALAGNEDLRVVVMYVEGLKYPGE-GRRLLEVMRR 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + KP++ + AG++ GR + H A+ G E +++AG + Sbjct: 236 VTKVKPVIVYKAGRSKSSGRAVKSHTAALA----GNYEIYRAMLRQAGAIEVNNLMD 288 >gi|326332639|ref|ZP_08198907.1| acetyltransferase, GNAT family [Nocardioidaceae bacterium Broad-1] gi|325949640|gb|EGD41712.1| acetyltransferase, GNAT family [Nocardioidaceae bacterium Broad-1] Length = 900 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 63/306 (20%), Positives = 119/306 (38%), Gaps = 31/306 (10%) Query: 4 LVDKNTKVLVQGLTGKA---GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 + + V V G + + G ++ T V ++P + +P + Sbjct: 200 FFNPRS-VAVIGASRRQETVGQALVRNLVIGDFTGRVYMVNPS------SSAVSGMPAYK 252 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVK 114 +V + + + +++ VP D +++ + +V I+ G R+ Sbjct: 253 SVQDIPD--DVDVAIVAVPADAVQDVVLDCAAKGVHGLVVISSGFAETGEEGRQRQRRLV 310 Query: 115 ARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 RLIGPN G++ P + ++ +G G +SG L + + + Sbjct: 311 NLSRSYGLRLIGPNALGVINTDPQVKINASLAPTMPPRGRAGFFCQSGALGSAILEKVNN 370 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLG ST V G D+L+ + D +TE ++M E G+ +F + + Sbjct: 371 RGLGLSTFVSAGNRA--DVSGNDLLQYWEEDVSTEVVMMYLESIGNP----RKFSRIARR 424 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 ++KPIV +G+T G MGHA IS + ++AGI + + Sbjct: 425 VSQRKPIVAVRSGRT-TQGVPMGHAVRKISAPPAAVD---AMFRQAGIIQVDTLDEMFD- 479 Query: 293 LVELLG 298 + +LL Sbjct: 480 VAQLLA 485 >gi|242398199|ref|YP_002993623.1| Acyl-CoA synthetase, subunit alpha [Thermococcus sibiricus MM 739] gi|242264592|gb|ACS89274.1| Acyl-CoA synthetase, subunit alpha [Thermococcus sibiricus MM 739] Length = 473 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 111/298 (37%), Gaps = 28/298 (9%) Query: 11 VLVQGLT---GKAGTFHTEQAILYCQTQVV-GGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 V + G T GK G E + + G I+P V+ V E Sbjct: 19 VAIIGATNKKGKVGNVIFENFKKNKEQGIFKGSIYPVNPK---LDEIEGYKVYKGVKELP 75 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKS 120 E T + +VI +P + E E I ++ IT G L K +++ Sbjct: 76 EDT--DLAVISIPAPFVPQTMKEIAEKGIKSVIIITGGFGELGEEGRKMEEEILKIAKEN 133 Query: 121 SSRLIGPNCPGILTPDSC----KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 R+IGPNC G+ PD+ + + GS+ +++SG + + G+G Sbjct: 134 GIRIIGPNCVGVYVPDTGVDTVFLPDEKMDRPKSGSIAFVTQSGAFAAAMLDWAAGAGIG 193 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 V G + D+++ F+ DE+ +++ + E +E +F++ + + Sbjct: 194 IGKMVSYGNK--LDVDDADLMDYFIYDESIKAVTLYIE----GVKEGRKFIEAAKRITKV 247 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KP++ +GKT + ++G + K+ GI A + Sbjct: 248 KPVIALKSGKTEYGAKAASSHTGSLAGADIIYDAV---FKQTGILRAEDFEHMFDVAK 302 >gi|76802071|ref|YP_327079.1| acetate--CoA ligase [Natronomonas pharaonis DSM 2160] gi|76557936|emb|CAI49520.1| acyl-CoA synthetase III (probable acetate--CoA ligase (ADP-forming)) [Natronomonas pharaonis DSM 2160] Length = 697 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 105/286 (36%), Gaps = 23/286 (8%) Query: 10 KVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT 69 +V V G T + G + G + P +T G + + T Sbjct: 12 RVAVVGATERDGAV-GRAVMENLVDDFDGEVVPVNPNTDSVFGRRS-------RDRVGET 63 Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA------RLEKSSSR 123 A+ +V+ VP A D + + +A I +V I+ G ++ Sbjct: 64 DADLAVVVVPAPEAVDVVAAAGDAGIKNVVVISAGFSETGSEGTAREEALVEAADRHGIN 123 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPNC GIL+ + R G++ +S+SG L + + G+G + V + Sbjct: 124 VVGPNCLGILSTPTGLNATFSPRNARPGNISFMSQSGALVTAVLDWAADRGIGFNDVVSL 183 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G V D ++ + D+ T+ ++ E + A F+ A P+ Sbjct: 184 GNKAVLDET--DFVDTWGEDDDTDVVLGYLEDI----QNGASFVDAAATATESTPVAVLK 237 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +G+T + ++G + E A ++AG+ S + Sbjct: 238 SGRTDAGAQAASSHTGAVTGSEVAYE---AAFEKAGVLPVASTEEL 280 >gi|124485685|ref|YP_001030301.1| hypothetical protein Mlab_0863 [Methanocorpusculum labreanum Z] gi|124363226|gb|ABN07034.1| CoA-binding domain protein [Methanocorpusculum labreanum Z] Length = 707 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 106/284 (37%), Gaps = 27/284 (9%) Query: 27 QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA 86 A+ Q G ++P V + T+++ + VI VP Sbjct: 281 YAVFRNILQFPGKVYPVNNKR---DEIQGVKCYPTLSDIPGH--VDMVVITVPAQLVPAI 335 Query: 87 IIESIEAEIPLIVCITEGIPVLDM------VRVKARLEKSSSRLIGPNCPGILTPDSCKI 140 + E + + V IT G +D R+ + R++GPNC G++ P Sbjct: 336 MSECGLKGVKMAVVITAGFKEMDEDGRALETRMVEIAKNYGIRIVGPNCLGLILPPFKLD 395 Query: 141 GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG--LGQSTAVGIGGDPVKGTEFIDVLE 198 + G + +S+SG + V + EG +G S V +G +F+D + Sbjct: 396 TTYVSTSPLPGDIAFISQSGAIVNAVVGISLSEGSEMGYSEVVSVGNQ--CDLDFLDYMS 453 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T+SI++ E + F++ + + KPIV AG + A Sbjct: 454 YAARDPHTKSIILYVE----EIKNGVAFMEMAKEITQTKPIVAIKAG----SSKRGQAAA 505 Query: 259 AVISGGK-GGAEDKINAMKEAGICIAPS-PARIGRSLVELLGSL 300 A +G G + + A ++ G+ + P + + LG L Sbjct: 506 ASHTGSLSGSFDVYMEAFRKCGVVPVKTLPG--AFQVAKALGDL 547 >gi|78044289|ref|YP_359136.1| acetyl-CoA synthase [Carboxydothermus hydrogenoformans Z-2901] gi|77996404|gb|ABB15303.1| acetyl-CoA synthase [Carboxydothermus hydrogenoformans Z-2901] Length = 716 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 96/259 (37%), Gaps = 23/259 (8%) Query: 37 VGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIP 96 V G++P+ + V+ V + +VI +P A A+ E+ EA + Sbjct: 53 VFGVNPR------VKKIQEIEVYPDVFSLP--YPVDLAVIVLPAEKAVVALKEAAEAGVK 104 Query: 97 LIVCITEGIPVLDMV------RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 V I+ G +K ++GPNC GI+ + + K Sbjct: 105 SAVVISGGFKETGNEGALLEEEIKKIALDFEMPVLGPNCVGIVNNNLQLNATFLRTAPLK 164 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G + +S+SG + + + +E LG S + +G V D L D T I+ Sbjct: 165 GEIAFVSQSGAILSTVLEWSLKEDLGFSYMISMGNKAV--LNEADFLPAIANDPGTAVIL 222 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + E E + FLK + KP+V F AG + + ++G G + Sbjct: 223 LYIEDV----VEGSSFLKKAYEASLLKPVVVFKAGISTAGAKAASSHTGALAGSIEGYKL 278 Query: 271 KINAMKEAGICIAPSPARI 289 A + G+ A + + Sbjct: 279 ---AFAKTGLIRAKTLEEM 294 >gi|134299927|ref|YP_001113423.1| CoA-binding domain-containing protein [Desulfotomaculum reducens MI-1] gi|134052627|gb|ABO50598.1| CoA-binding domain protein [Desulfotomaculum reducens MI-1] Length = 701 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 112/300 (37%), Gaps = 25/300 (8%) Query: 1 MSILVDKNTKVLVQG--LTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPV 58 +S L N+ ++ GK G + I T + ++P + Sbjct: 4 LSPLFTVNSVAIIGASKKAGKVGNVLMKNVINSGFTGKIFPVNPN------EYEIEGLTC 57 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVR 112 F+T++E + + +V+ VP + + E + I V I+ + R Sbjct: 58 FSTLSEIPNQ--IDLAVVCVPALNCPEVLEECGKHSIKNAVVISSYFSEIGPEGLQLEKR 115 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + + +K L+GPNC G++ + S ++G +G +S+SG + + + Sbjct: 116 LVSICKKYGIHLLGPNCEGMMDTRIPLNASISPSFPKRGDIGFISQSGAMLLSIMDWSRT 175 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 LG S +G D+++ D T+ I+ E ++ +FL+ +K Sbjct: 176 VSLGFSRVFSLGNKA--DVSETDLIKCLANDPLTKVILCYIEDV----QKGKEFLEVASK 229 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 +KKP++ +G + + G E A +AGI A + + Sbjct: 230 ATKKKPVIILKSGTSQAGTLAASSHTGALVGSDLAYET---AFTQAGILRARTMTELFDL 286 >gi|222478754|ref|YP_002564991.1| CoA-binding domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222451656|gb|ACM55921.1| CoA-binding domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 704 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 87/218 (39%), Gaps = 17/218 (7%) Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGI 132 PPS DAI EA + +V IT G R+ ++ L+GPN GI Sbjct: 73 PPSIVLDAIEACGEAGVRNVVVITAGFGETGEDGAARERRLAEIADEYDLNLVGPNSLGI 132 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG-T 191 ++ S G + +S+SG + + G+G V +G V T Sbjct: 133 MSTPSGMNATFGPENALPGGLSFMSQSGAFVTAVLDWANDNGIGFKDVVSLGNKAVLDET 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F+D + DE T+ I+ E E+ +F++ + + PIV +G+T+ Sbjct: 193 DFVDH---WGNDEETDVIIGYLE----GIEDGREFIEAARETTQDTPIVAVKSGRTSAGA 245 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + ++G E ++ +AG+ A S + Sbjct: 246 QAASSHTGTLAGSDKAYEAGLD---QAGVIRAESVDEL 280 >gi|52549001|gb|AAU82850.1| conserved hypothetical protein [uncultured archaeon GZfos1D1] Length = 448 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 100/265 (37%), Gaps = 20/265 (7%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P + + + + +V + + +I VP + E I Sbjct: 36 YSGEVYPVNPN---EDEVLGMRCYPSVLDLP--HRVDLGIIAVPAEIVPAVLEECGRKGI 90 Query: 96 PLIVCITEGIPVLDMVRVKAR----LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 +V ++ G + ++ + R+IGPN G + + + G Sbjct: 91 RGVVIVSAGFSEIGNSELENKVSDIARDYEMRMIGPNTFGFINTHLNLNASIIPQMPVIG 150 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 + +++SGT V + + +G VG+G + D+L AD T++I+M Sbjct: 151 GISFVTQSGTFGLALVDWAASQQMGLHLVVGVGNKA--DVDDSDILAYLSADRHTKTIMM 208 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDK 271 E E +F+ ++ +KP++ G++ + + ++G + Sbjct: 209 YIE----GIERGRRFIDVASRI--RKPVIALKTGRSLAGSKAVLSHTGSLAGTDRIYD-- 260 Query: 272 INAMKEAGICIAPSPARIGRSLVEL 296 A K+AG+ A + + S + L Sbjct: 261 -GAFKQAGVIRAWTIEELFDSALAL 284 >gi|116749894|ref|YP_846581.1| CoA-binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116698958|gb|ABK18146.1| CoA-binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 669 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 106/288 (36%), Gaps = 25/288 (8%) Query: 9 TKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKER 68 + V V G + AG E + G ++P + + F V + ++ Sbjct: 13 SSVAVIGASDSAGKLGHEILKNLIEGGFPGALYPINPKAE---KILGLTCFKNVKDIPDQ 69 Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSS 122 + +V+ +P A+ + E + V +T G K Sbjct: 70 --VDMAVVIIPARMVPQAVRDCGEKGVKGAVIVTGGFSEAGAEGAKLQEELVRVASNYDI 127 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RL+GPNC G+ P P + G V ++S+SGT+ + S E LG S+ V Sbjct: 128 RLVGPNCQGVNNPHHPMCASWPLLTHK-GRVAVISQSGTVGAAMMDWFSVEELGVSSFVS 186 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + +D++E F D T+ I + E + + KP+V Sbjct: 187 LGNRA--DIDEVDLIEYFEGDPNTKVIAVYIEGIKDPQR------FRDVLSTLSKPLVVL 238 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 +G+T P GR A + GA+ + + G+C A + Sbjct: 239 KSGRT-PGGRV---AAESHTKSLAGADAIYASLFRRHGVCRAETIEEF 282 >gi|154315096|ref|XP_001556871.1| hypothetical protein BC1G_04587 [Botryotinia fuckeliana B05.10] gi|150847550|gb|EDN22743.1| hypothetical protein BC1G_04587 [Botryotinia fuckeliana B05.10] Length = 384 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 59/131 (45%), Positives = 83/131 (63%), Gaps = 1/131 (0%) Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 T++ GLGQS +G+GGD + GT F+D L++F D+ T+ I+++GEIGG AE EAA ++K+ Sbjct: 8 TTRAGLGQSLCIGMGGDVLAGTNFVDALKIFEHDDDTDGIIIIGEIGGEAELEAADWIKE 67 Query: 230 EAKRG-RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 KR KPI VAG A PG+ MGHAGA G+ A KI A + G+ + PA+ Sbjct: 68 YKKRSPNPKPITALVAGVHAAPGKVMGHAGAFTLPGEPDALTKIKAFENVGVTMVNHPAK 127 Query: 289 IGRSLVELLGS 299 G ++ LL S Sbjct: 128 FGTAMKTLLES 138 >gi|297619719|ref|YP_003707824.1| CoA-binding domain-containing protein [Methanococcus voltae A3] gi|297378696|gb|ADI36851.1| CoA-binding domain protein [Methanococcus voltae A3] Length = 707 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 107/298 (35%), Gaps = 25/298 (8%) Query: 4 LVDKNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 + + + V V G T GK G + + + G ++P + + Sbjct: 12 IFNPKS-VAVIGATEIEGKVGQSLMKNLKSFMEK--GGNVYPINKKY---DEVYGLKCYG 65 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKAR 116 +V + + ++ +P + E + + + IT G + + Sbjct: 66 SVLDVP--GDIDLVLVSIPAKFVPGTMEECGKKGVKGSIIITAGFSEVGDHSLEEKTIEI 123 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 L+K R IGPNC G++ +KG++ +S+SG + + + LG Sbjct: 124 LKKYDIRTIGPNCLGVINMHDELNASFSKDFDQKGNIAFISQSGAIMTALMDISIPLNLG 183 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S V +G + ++L+ DE T+ +V+ E + +F+ K Sbjct: 184 YSKIVSMGNK--IDVQEDEILDYLADDEHTDVVVLYVEGLKNE-----KFIDSARALSHK 236 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KP++ +GK+ + ++G A+ A K+ + + + L Sbjct: 237 KPVIVLKSGKSDAGAKAASSHTGSLAGN---AQMYEAAFKKGMVFDVETFEEMVDLLK 291 >gi|297624838|ref|YP_003706272.1| GCN5-related N-acetyltransferase [Truepera radiovictrix DSM 17093] gi|297166018|gb|ADI15729.1| GCN5-related N-acetyltransferase [Truepera radiovictrix DSM 17093] Length = 883 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 89/236 (37%), Gaps = 21/236 (8%) Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK----- 114 +VA E + ++I +PP A+ A + +V +T G Sbjct: 261 PSVAALPE--PPDLAIIALPPEQVLAAVDACGAAGVRALVVVTTGFAETGAAGRALQEGI 318 Query: 115 -ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 R RLIGPN G++ + GSV + S+SG L + + Sbjct: 319 AERSRAHGMRLIGPNSLGVINLSVGLNASLAPHPPPAGSVAVSSQSGALGLAILEHAAAA 378 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 GLG S+ V +G + D+L+ + DEAT+ I++ G+ +F + + Sbjct: 379 GLGLSSFVSLGNKADVSSN--DLLQYWEDDEATKLILLYLASFGNP----RRFARLARRV 432 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 GRKKPI+ AG R A GG ++ G+ + + Sbjct: 433 GRKKPILAVKAG------RAPLDAATAAEGGL-SERAADALFQQTGVIRTETFEEL 481 >gi|212224787|ref|YP_002308023.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus onnurineus NA1] gi|212009744|gb|ACJ17126.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus onnurineus NA1] Length = 438 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 93/250 (37%), Gaps = 22/250 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK G+ G + K +A++I +P I E E I Sbjct: 40 PVNPKGGTVEIAGKAFEI-------RPKLEEPVDAAIIAIPAKFVPSLIDEIGEL-IKGA 91 Query: 99 VCITEGIPVLDMVRV----KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 V I+ G + V + + K R+IGPNC GI G + + G + Sbjct: 92 VVISAGFSEVGNVELERELVEKARKHGIRIIGPNCAGIFGVHGKFFGSFEVRV-KPGGLA 150 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++S+SG A+ + E +G S V G D L F D+ T++I + E Sbjct: 151 LISQSGAFGGAALAMGNDERIGFSAFVSYGNAA--DLNESDFLRYFADDKNTKAIALYIE 208 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 + +F++ KKP++ AGK+ R ++ G E A Sbjct: 209 ----GVRDGRRFMEALRYAAGKKPVIILKAGKSKSGARAAASHTGSLA---GSYEIYRAA 261 Query: 275 MKEAGICIAP 284 K+AG Sbjct: 262 FKQAGAIEVE 271 >gi|18978210|ref|NP_579567.1| hypothetical protein PF1838 [Pyrococcus furiosus DSM 3638] gi|18894021|gb|AAL81962.1| hypothetical protein PF1838 [Pyrococcus furiosus DSM 3638] Length = 473 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 105/298 (35%), Gaps = 28/298 (9%) Query: 11 VLVQGLT---GKAGTFHTEQAILYCQTQVV-GGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 V + G T GK G E + + G I+P V+ +V E Sbjct: 20 VAIIGATNKKGKVGNVIFENFKRNKERGIFKGNIYPVNPK---LDEIDGYKVYHSVEELP 76 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKS 120 + T + +V+ +P + + + E I +V IT G L + Sbjct: 77 DDT--DLAVVAIPAPAVPETMRKIAEKGIKAVVIITGGFGELGEEGKRMEQEILEIARAH 134 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGS----IFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 R+IGPNC G+ PD+ + + G + +S+SG + + G+G Sbjct: 135 GIRVIGPNCVGVYVPDTGVDTVFLPEEKMDRPKSGPIAFVSQSGAFAAAMLDWAAMAGIG 194 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 V G + D++E F DE + + E ++ +F++ + + Sbjct: 195 IGKMVSYGNK--IDVDDADLMEYFAQDEQIKVMTFYIE----GVKDGRRFMEVAKRVTKI 248 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KPI+ +G+T + ++G + K+ GI A + Sbjct: 249 KPIIALKSGRTEYGAKAASSHTGSLAGQDVIYDAV---FKQTGIIRAEDFEHMFDLAK 303 >gi|300712376|ref|YP_003738190.1| acetyl-CoA synthetase [Halalkalicoccus jeotgali B3] gi|299126059|gb|ADJ16398.1| acetyl-CoA synthetase [Halalkalicoccus jeotgali B3] Length = 695 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 61/289 (21%), Positives = 112/289 (38%), Gaps = 28/289 (9%) Query: 10 KVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 +V V G T G G T I +VVG ++P G G V Sbjct: 12 RVAVVGATPGEGSVGRAITANLIEGFSGEVVG-VNPNYG--TVLGVEC-------VDSLA 61 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL------DMVRVKARLEKS 120 + + +V+ VPP A + + E+ E + +V IT G ++ + Sbjct: 62 DAGEPDLAVVVVPPGIAIEVVREAGEVGVENVVVITAGFGETGSEGATRERELREVAREY 121 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 L+GPN GI++ +G++ +S+SG + + +G+G + Sbjct: 122 DLNLVGPNSLGIMSTSVGLNATFGPDDALEGNLSFMSQSGAFITAVIDWANDQGIGFNDV 181 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 V +G V + D +E + D+ T+ ++ E EE +F++ + R P+V Sbjct: 182 VSLGNKAV--LDEADFVEAWNEDDGTDVVIGYLE----GIEEGREFIETAREVTRDTPVV 235 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +G+T + I+G + E + +AG+ A S + Sbjct: 236 LVKSGRTDAGAQAASSHTGTIAGSERAYE---AGLAQAGVLRAESVQEL 281 >gi|288941452|ref|YP_003443692.1| CoA-binding domain-containing protein [Allochromatium vinosum DSM 180] gi|288896824|gb|ADC62660.1| CoA-binding domain protein [Allochromatium vinosum DSM 180] Length = 892 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 98/249 (39%), Gaps = 20/249 (8%) Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----- 111 P ++ + E ++ + ++I P + + + V + G Sbjct: 58 PCYSNLNELDKQ--IDLALIATPGECVPAILDQCGSYGVKAAVVHSAGFGEHGERGIALQ 115 Query: 112 -RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 ++ ++ R++GPNC G++ P + + R+G+V ++S+SG + + + Sbjct: 116 EKMVEAARRNRIRVMGPNCLGVMRPQHGLNASVGEDLPRRGNVALVSQSGAICTAMIDWS 175 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 G+G S V IG +F D+L+ D T+ I++ E A F+ Sbjct: 176 ESRGVGFSAVVSIG--AAADVDFGDILDYLALDTQTQCILLYVE----GIRHARHFMSGL 229 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 R KP+V AG+ R + H G + G AE AG+ + ++ Sbjct: 230 RAAARLKPVVIVKAGRHPAGTRAIKSHTGGFV----GSAEVFRAVTDRAGVVQVANLDQL 285 Query: 290 GRSLVELLG 298 + ++ G Sbjct: 286 FAA-AQVFG 293 >gi|319785961|ref|YP_004145436.1| CoA-binding protein [Pseudoxanthomonas suwonensis 11-1] gi|317464473|gb|ADV26205.1| CoA-binding domain protein [Pseudoxanthomonas suwonensis 11-1] Length = 904 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 105/286 (36%), Gaps = 21/286 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G G VG ++PK VP ++ + A V+ Sbjct: 25 GSVGRTVVHNLRQAGFAGAVGLVNPK------YRQIEGVPAVASLRDLP--FAPELVVVT 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGPNCPGILT 134 P + I +++ V ++ G+ P + +++ R++GPNC G++ Sbjct: 77 TPAATVPGVIAQAVAVGARAAVVVSAGLGQGPGSLLEHLRSEARPHGLRIVGPNCLGVMA 136 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 P G + ++S+SG + V + +G S V +G +F Sbjct: 137 PHVGLNASFAARSPLPGDLALVSQSGAIAAGLVEWGAARSIGFSAVVSLG--DALDVDFG 194 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM 254 D+L+ F D T +I++ E + +A +F+ R KP+V +G+ R Sbjct: 195 DLLDWFAQDPKTRAILLYIE----SIRDARKFMSAARAAARSKPVVVIKSGRHEQGARAA 250 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 ++G + A + AG+ + + + E LG L Sbjct: 251 ATHTGALAGSDAVYD---AAFRRAGLLRVHALDELFAA-AETLGHL 292 >gi|296241887|ref|YP_003649374.1| CoA-binding domain-containing protein [Thermosphaera aggregans DSM 11486] gi|296094471|gb|ADG90422.1| CoA-binding domain protein [Thermosphaera aggregans DSM 11486] Length = 459 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 119/297 (40%), Gaps = 25/297 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 + ++ ++ G + K G + + + G I+P + + + + +V Sbjct: 5 FFNPSSVAII-GASDKPG-KVGKVILENFLKKFNGKIYPVNPNYDVI---MGLKCYKSVR 59 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM-------VRVKAR 116 E E + +VI +P + + E ++ I+ G + +VK Sbjct: 60 ELPE--PPDLAVIVIPAPSVPEVLEELGAKGTKAVIIISGGFRETNTPQGEMLEEKVKEI 117 Query: 117 LEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 K R+IGPNC GI D+ + KG VG +S+SG + + Sbjct: 118 AAKYGIRIIGPNCIGIFDNWSGVDTFFLPEEKMKRPPKGYVGFISQSGAFASAIIDWMAY 177 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 +G S AV G + +D+L+ F++DE T+ ++M E G +F+K + Sbjct: 178 NNIGVSRAVSYGNK--VDVDDVDLLKFFMSDEKTKIVLMYLE--GLKTSRGKEFIKVARE 233 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + KP V + AGKT+ + + G +A+K++G+ A S I Sbjct: 234 LVKVKPAVIYKAGKTSRGSMAA---ASHTAALAGDYSLYKSAIKQSGLIEAESFDEI 287 >gi|117924405|ref|YP_865022.1| CoA-binding domain-containing protein [Magnetococcus sp. MC-1] gi|117608161|gb|ABK43616.1| CoA-binding domain protein [Magnetococcus sp. MC-1] Length = 706 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 113/300 (37%), Gaps = 30/300 (10%) Query: 4 LVDKNTKVLVQGLTGKAGTF-HTEQAILYCQTQ-VVGGIHPKKGSTYWTGGNVNVPVFTT 61 + + + +V G + + G+ H + L Q V+ ++P+ + V + + Sbjct: 8 IFNPQSIAVV-GASNRPGSVGHAIFSNLLGTFQGVIYPVNPR------NMAVLGVRAYPS 60 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKA 115 VAE E + V+ VP + + E+ + + + IT G +KA Sbjct: 61 VAELPE--TVDLVVVVVPTAQVAAVVDEAGQRGVRGAIVITAGFKEVGGEGLEHENHLKA 118 Query: 116 RLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + K L+GPNC G++ + G++ +S+SG L + Sbjct: 119 VVAKHGMALVGPNCLGVINAHNSVRMNASFATKSPSAGNIAFISQSGALCTAVLDYAMGR 178 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G S + G D+LE D T++I+M E + +F++ + Sbjct: 179 NIGFSKFISFGNKA--DVTECDLLEYLKDDPDTDAILMYLEDVS----DGRRFIETARRV 232 Query: 234 G--RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 KKP++ +G +A + ++G + + ++GI + + + Sbjct: 233 AWESKKPMLAIKSGTSAEGKKAATSHTGALAGSEAAYD---AIFLQSGIQRVETISELFE 289 >gi|167043891|gb|ABZ08579.1| putative CoA-binding domain protein [uncultured marine crenarchaeote HF4000_APKG3H9] Length = 700 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 117/299 (39%), Gaps = 26/299 (8%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 S+ + + + V G + K G+ G ++P + + + Sbjct: 4 SVFLSPKS-IAVIGASDKQGSV-GRAITSNIMNGYKGTVYPISPTRETVFDQKA---YKS 58 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKA 115 V + + + +V+ + + E + I + IT G +D ++K Sbjct: 59 VLDVPD--PIDLAVVITKNTIVPIVLEECGKKGIKGAIVITAGFKEVDEEGKKLEQKLKD 116 Query: 116 RLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 K ++IGPNC G++ P + + G + ++S+SG + V S + Sbjct: 117 IATKYGVKVIGPNCLGVMNLDPKTMMNSTFLKITPKSGQIALVSQSGAICAALVEDASAQ 176 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE--EAAQFLKDEA 231 G+G S V +G DVL++ E T+ IVM E G+ +E + + + Sbjct: 177 GIGFSAVVSMGNKA--DMTENDVLKMLADHEQTKVIVMYLEDMGNGQEFLKVCKQITKYN 234 Query: 232 KRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + KKP++ AG++ + M H GA++ G E +K++G + + Sbjct: 235 EI--KKPVLVLKAGRSPEGAKAAMSHTGALM----GSDEIYDAVLKQSGAIRVDTMEEL 287 >gi|119717172|ref|YP_924137.1| CoA-binding domain-containing protein [Nocardioides sp. JS614] gi|119537833|gb|ABL82450.1| CoA-binding domain protein [Nocardioides sp. JS614] Length = 899 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 110/296 (37%), Gaps = 24/296 (8%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + + T G ++ ++ G +P + TV + + Sbjct: 206 VAVIGASRRQETIGQALVRNLVMGDFAGRVYAVNPTSSAVSG---LPTYKTVGDIPD--D 260 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA------RLEKSSSRL 124 + +++ VP D +++ + +V I+ G RL Sbjct: 261 VDVAIVAVPAEAVQDVVLDCAAKGVHGLVVISSGFAETGEEGRVRQRKLVGLSRSYGLRL 320 Query: 125 IGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 IGPN GI+ + + + +G G +SG L + + GLG ST V Sbjct: 321 IGPNALGIINTAAEVSLNASLSPLMPPRGRAGFFCQSGALGTAILEKVYNRGLGLSTFVS 380 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 G D+L+ + D++TE +++ E G+ +F + + +KPI+ Sbjct: 381 AGNRA--DVSGNDLLQYWEEDDSTEVVLLYLESIGNP----RKFSRIARRVSLRKPIIAV 434 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +G+T G MGHA I + ++AG+ + + + +LL Sbjct: 435 RSGRT-TQGVPMGHAVRKIVAPPAAVD---AMFRQAGVIQVDTLEEMFD-VAQLLA 485 >gi|124809263|ref|XP_001348531.1| succinyl CoA ligase, putative [Plasmodium falciparum 3D7] gi|23497427|gb|AAN36970.1| succinyl CoA ligase, putative [Plasmodium falciparum 3D7] Length = 973 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 109/248 (43%), Gaps = 19/248 (7%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK---- 114 + ++ + KE + + +VI VP + + + E + +V IT G ++ Sbjct: 91 YKSLKDIKEDS-IDLAVIAVPRNNVVNVMHELKIKNVRGVVIITAGFKETGAEGLRLENE 149 Query: 115 --ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + ++ R+IGPNC GI+ S KG +LS+SG + A+ + Q Sbjct: 150 IINIGKTNNMRIIGPNCLGIIHSYHNMNASFASSDILKGHFSLLSQSGAICSAALDLSLQ 209 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 +G S + +G + +F +++E D T+ I++ E G + +F+ K Sbjct: 210 HNIGFSHFISVGS--MCDVQFYELVEYLFYDVNTKYILLYVESIG----DMNRFVAVCKK 263 Query: 233 RGRKKPIVGFVAGKTAPPG-RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 KPI+ +GKTA + H G+++ G E MK+ G+ + + + Sbjct: 264 VCLYKPIILLKSGKTAKAAEAAISHTGSMV----GNYEIFYATMKKLGVLVVDNFEEL-F 318 Query: 292 SLVELLGS 299 ++ ++L S Sbjct: 319 NMCKVLNS 326 >gi|147677842|ref|YP_001212057.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI] gi|146273939|dbj|BAF59688.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI] Length = 701 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 96/281 (34%), Gaps = 23/281 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G I + ++PK + + V +V+ Sbjct: 23 GKIGNAIVRNLIECGYQGKIYPVNPK------ESEIEGLVCYPQVTAVPAE--VEMAVLA 74 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR---VKARLE---KSSSRLIGPNCPG 131 VP + +A E + + + IT G + K LE K L+GPNC G Sbjct: 75 VPAAKVLEAAGECGKKGVRALTVITAGFKEVGKEGLDLEKKLLETCNKYGMLLLGPNCVG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ + + KG + S+SG + + +S GLG S V +G Sbjct: 135 LIDTHTPINATFAATFPYKGDIAFFSQSGAILLAILDWSSSTGLGFSKVVSLGNKA--SL 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 ID +E D T I+ E + +FL+ + +KKPI+ +G + Sbjct: 193 SEIDFIEDAADDPYTRVILCYIEDI----VDGPRFLEVARRAAKKKPIIVLKSGVSQAGA 248 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 ++G + A ++ G+ S + Sbjct: 249 LAASSHTGALAGSDLAYDT---AFQQCGVIRVRSMTELFDL 286 >gi|94313287|ref|YP_586496.1| hypothetical protein Rmet_4362 [Cupriavidus metallidurans CH34] gi|93357139|gb|ABF11227.1| conserved hypothetical protein with a putative CoA binding domain [Cupriavidus metallidurans CH34] Length = 709 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 110/296 (37%), Gaps = 25/296 (8%) Query: 1 MSILVDKNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVP 57 M+ ++ +T V V G + GK G + I + IHPK + + Sbjct: 254 MNRIMRPDT-VAVIGASAEDGKIGNSVMKNLINGGYQGKIYPIHPK------ADEIMGMT 306 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR----V 113 + +V + + +V +P A+ E + IP V I G V + Sbjct: 307 AYKSVLDVP--GDVDVAVFAIPAKFVAQALEEVGKKGIPGAVLIPSGFAETGNVEGQEEI 364 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 A K + RL+GPN G KG + S+SG + + + Sbjct: 365 VAIARKHNIRLMGPNIYGFYYTPKNLCATFCTPYDVKGKAALSSQSGGIGMAIIGFSRSA 424 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G S VG+G + D+L F D+ TE I E ++ F + + Sbjct: 425 KMGVSAIVGLGNKSDIDED--DLLTFFEQDDNTEIIAQHCEDL----KDGRSFAEVARRV 478 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +KKP+V AG+T+ R ++G ED K+AG+ A S + Sbjct: 479 SKKKPVVVLKAGRTSLGARAASSHTGALAGNDKIYEDV---FKQAGVIRARSLRDL 531 >gi|167044574|gb|ABZ09247.1| putative CoA-binding domain protein [uncultured marine crenarchaeote HF4000_APKG7F11] Length = 640 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 119/299 (39%), Gaps = 26/299 (8%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 S+ + + + V G + K G+ G ++P + + + Sbjct: 4 SVFLSPES-IAVIGASDKEGSI-GRAITSNIMKGFKGTVYPISPTRETVFDQKA---YKS 58 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKA 115 V + + + +VI + + E + +I + IT G +D ++K Sbjct: 59 VLDVPD--PIDLAVIITKNTIVPVVLEECGKKKIKGAIVITAGFKEVDEEGKKLEQKLKE 116 Query: 116 RLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 K ++IGPNC G++ P + + G + ++S+SG + V S + Sbjct: 117 IATKYDVKVIGPNCLGVMNLDPKTMMNSTFLKITPKSGQIALVSQSGAICAALVEDASAQ 176 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE--EAAQFLKDEA 231 G+G S V +G IDVL++ E T+ IVM E G+ +E + + + Sbjct: 177 GIGFSAVVSMGNKA--DMTEIDVLKMLADHEQTKVIVMYLEDIGNGQEFLKVCKQITKYN 234 Query: 232 KRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + KKP++ AG++ + M H GA++ G E +K++G + + Sbjct: 235 EI--KKPVLVLKAGRSPEGAKAAMSHTGALM----GSDEIYDAVLKQSGAIRVDTMEEL 287 >gi|218780872|ref|YP_002432190.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762256|gb|ACL04722.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 484 Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 17/237 (7%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVR 112 + TV E + +++ +P +A+ + I ++C+T G Sbjct: 64 YKTVEELPCAP--DLAIMVIPTRVVLEAMEACGKKGIKNVICVTAGFKEVGGEGPEREKE 121 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + EK R IGPNC G+ + + G +G+ S+SG+ + + Sbjct: 122 LVRIAEKYGIRFIGPNCIGVTNASAKLNTTFLADNSKPGCIGLASQSGSFVTQMFNYLDR 181 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G STA +G + +D LE A T+ I + E +F++ Sbjct: 182 MDQGFSTAFSVGNGANI--DLVDCLEYLGASPDTKVIALYVE----GIARGREFMETAKA 235 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KPIV G + R ++G + ++ GI A S + Sbjct: 236 IVPHKPIVAIYVGGSETGKRATFSHTGTMAGPDALYD---GMFRQCGIIRASSIVEL 289 >gi|11499106|ref|NP_070340.1| hypothetical protein AF1511 [Archaeoglobus fulgidus DSM 4304] gi|2649053|gb|AAB89736.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 881 Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 18/244 (7%) Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------ 107 + V + T++E + +V+ VP A + E + + ++ +T G Sbjct: 240 MGVRAYPTISEVPDE--VELAVLSVPVKYALEVAEECGKKGVKALLVLTAGFAEVGGEGV 297 Query: 108 LDMVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 ++ K RLIGPNC GI+ P++ + + +GS+ S+SG + Sbjct: 298 ERQKKLVEICRKYGMRLIGPNCMGIINTAPETRLLATFAPTPPNEGSIAFASQSGAVGLA 357 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + + + GLG S V +G + D++E + D T+ I++ E + + Sbjct: 358 LMDRVNNYGLGLSYFVSLGNSADITSN--DLIEFWEEDGRTKLIMLYQE----SIPNPRK 411 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 F + + +KKPI+ +G T + + I G A D + K+ GI A S Sbjct: 412 FARLAKRISKKKPILAIASGVTPAGAKAVASHTGAIVSSSGIAIDAL--FKQTGIIRASS 469 Query: 286 PARI 289 + Sbjct: 470 IDEL 473 >gi|114563099|ref|YP_750612.1| CoA-binding domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114334392|gb|ABI71774.1| CoA-binding domain protein [Shewanella frigidimarina NCIMB 400] Length = 900 Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 49/301 (16%), Positives = 107/301 (35%), Gaps = 29/301 (9%) Query: 7 KNTKVLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 K T V V G + +AG + + + + + PK + V + + Sbjct: 11 KPTSVAVIGASNGNKRAGKAVMKNLLSGGFSGPIMPVTPK------YTAVMGVLAYPNIE 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------VKAR 116 + + ++I + + + + + G+ + K Sbjct: 65 ALPIKP--DLAIICTNALKVPSIVERLAQFGCKVAIIMASGMASQTDEQGNNLLELTKQY 122 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ RL+GPN G++ P + + G + +S+S + + + +G+G Sbjct: 123 AKRYGMRLLGPNSLGMILPPIGLNASLAHAGANVGKIAFVSQSAAICTTVLDWANNKGIG 182 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+ + +G +F ++L+ D T +I++ + E FL R Sbjct: 183 FSSFISLG--DATDIDFDELLDYLGRDSKTSAIMLYIDSIN----EKRHFLSAARAASRN 236 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVE 295 KPI +G++ A + +GG GG + A + AG+ + ++ Sbjct: 237 KPIFVIKSGRSREGV----QAAMLHTGGIGGNDAVYEAAFRRAGMLRVNDLIELFAAVES 292 Query: 296 L 296 L Sbjct: 293 L 293 >gi|23013940|ref|ZP_00053786.1| COG1042: Acyl-CoA synthetase (NDP forming) [Magnetospirillum magnetotacticum MS-1] Length = 903 Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 93/246 (37%), Gaps = 20/246 (8%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-------PVLDMV 111 + VA + ++I P +G + E +T G+ + Sbjct: 60 YPDVACLPMAP--DLALICTPVAGIPATLRTLGERGTKAACVMTGGLHLTQGEDGTTMLE 117 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + A + RL+GPN GIL P G + +S+SG L + Sbjct: 118 QALAVARQFDMRLLGPNSMGILVPGIGLNASSSHENVLPGKLAFVSQSGALCTAVLDWAR 177 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +G S + +G +G +F DVL+ +D +T +I++ E + E F+ Sbjct: 178 AREIGFSHFIHLG--DTEGVDFGDVLDYLGSDPSTRAILLYME----SIHERRNFMSAAR 231 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIG 290 R KP++ +G++ R A A +G G++ AM+ AG+ I Sbjct: 232 AAARNKPVLAIKSGRSKEGAR----AAASHTGALAGSDLVFDAAMRRAGMLRVKDIEEIF 287 Query: 291 RSLVEL 296 ++ L Sbjct: 288 GAVETL 293 >gi|147677695|ref|YP_001211910.1| succinyl-CoA synthetase, alpha subunit [Pelotomaculum thermopropionicum SI] gi|146273792|dbj|BAF59541.1| succinyl-CoA synthetase, alpha subunit [Pelotomaculum thermopropionicum SI] Length = 113 Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 55/116 (47%), Positives = 80/116 (68%), Gaps = 5/116 (4%) Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GGD V G FIDVL++F D T+++V++GEIGG+AEE A++++K+ KP+V F Sbjct: 1 MGGDRVVGLTFIDVLKMFEKDPQTKAVVLLGEIGGNAEETASEYIKE-----MSKPVVAF 55 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +AGK+APPG+ MGHAGA+I GKG + K+ A+ AG +A P+ I + E LG Sbjct: 56 IAGKSAPPGKRMGHAGAIIERGKGTYQGKVEALTAAGAKVATLPSEIPALIKEALG 111 >gi|297190800|ref|ZP_06908198.1| acyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486] gi|197722581|gb|EDY66489.1| acyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486] Length = 716 Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 99/277 (35%), Gaps = 21/277 (7%) Query: 17 TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVI 76 GK G I + ++PK + + +V + + +V Sbjct: 275 QGKIGNSVMRNLIDGGFPGDIHPVNPK------ADDILGRKAYKSVMDVP--GEPDVAVF 326 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEKSSSRLIGPNCPGI 132 +P A+ E IP V I G + A E+ RL+GPN G Sbjct: 327 AIPAKFVASALEEVGRKGIPNAVLIPSGFAETGEHELQAEIVAIAERYGVRLLGPNIYGY 386 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 + KG V + S+SG + + G S VG+G + Sbjct: 387 YSTWQDLCATFCTPYDVKGGVALTSQSGGIGMAILGFARTTRTGVSAIVGLGNK--SDLD 444 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 D+L F D T+ I M E ++ F++ + RKKP+V AG+TA + Sbjct: 445 EDDLLTWFGEDPNTQCIAMHLEDL----KDGRAFVEAARETVRKKPVVVLKAGRTAAGAK 500 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G ++G +D +++AG+ AP + Sbjct: 501 AAGSHTGALAGDDAVYDDV---LRQAGVIRAPGLNEM 534 >gi|159029029|emb|CAO90015.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 908 Score = 108 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 102/267 (38%), Gaps = 24/267 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P +++P ++++ + + + +I P I +S+E ++ Sbjct: 62 LVNP------HPENWLDLPTYSSLEDIQAA--IDLVIITAPAPEIPAIIAQSVEKKVKCA 113 Query: 99 VCITEGIPVLDMV-----RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSV 153 + ++ G + R + R+IGP+ GI + + GS+ Sbjct: 114 LILSTGFRETGQMGENLLREIKAIAGQKLRIIGPHSSGICNLSQNLNATFSPILPKTGSI 173 Query: 154 GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVG 213 ++S+SG + + + E +G S + +G + ++ ++L D T+SIV+ Sbjct: 174 ALISQSGAIAAAVLDWSLSENVGFSHFISLG--VLLDVDWGELLYYLGDDPQTKSIVIYL 231 Query: 214 EIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN 273 E A FL + KPI+ T ++ HAG + S + Sbjct: 232 ESLN----NARSFLSSAREVALNKPIIAISRHSTDFDPTSLSHAGKLTSDQLTLS----A 283 Query: 274 AMKEAGICIAPSPARIGRSLVELLGSL 300 A GI A + ++ ++L + Sbjct: 284 AFARCGIVEVQRLADL-LNITQVLAKI 309 >gi|111023770|ref|YP_706742.1| acetyl-CoA synthetase [Rhodococcus jostii RHA1] gi|110823300|gb|ABG98584.1| possible acetyl-CoA synthetase [Rhodococcus jostii RHA1] Length = 920 Score = 108 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 104/263 (39%), Gaps = 27/263 (10%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P G V + +V + + + +V+ VP + + + + Sbjct: 269 FTGPVYPVNAEHRSVHG---VRAYPSVRDIPDE--VDLAVVAVPAESINAVLDDCLVKGV 323 Query: 96 PLIVCITEGIPVLDM------VRVKARLEKSSSRLIGPNCPGILTPDS--CKIGIMPGSI 147 +V ++ G M R+ RLIGPN G+ DS + + Sbjct: 324 KALVVVSSGFSETGMDGRQSERRLVHAARAHGMRLIGPNALGVANNDSEVSLNATLAPVL 383 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 G+VG +SG L + + ++ +G S V G D+L+ + +D ATE Sbjct: 384 PSPGNVGFFCQSGALGIAILDEAARSRIGLSAFVSAGNRA--DVSGNDLLQYWDSDPATE 441 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 +++ E G+ +F + + R KPIV +G+ A P A+ + G Sbjct: 442 VVLLYLESFGNP----RKFSRIARRVARNKPIVAVKSGRHAVP-------PALAASGGEM 490 Query: 268 AEDKINA-MKEAGICIAPSPARI 289 + + A ++AG+ S +++ Sbjct: 491 DDSIVRALFEQAGVVQVGSISQL 513 >gi|145592005|ref|YP_001154007.1| CoA-binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145283773|gb|ABP51355.1| CoA-binding domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 461 Score = 108 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 119/308 (38%), Gaps = 22/308 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGT--FHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPV 58 +S L+D + V V G + K G+ + + ++ + V I+PK G + Sbjct: 2 LSKLLDPES-VAVAGASPKQGSVGYVILENLVNRFGKKVFPINPKYDEVELWGRVIKF-- 58 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----RVK 114 + +++E + VI P + E+ + V ++ G VK Sbjct: 59 YKSISEVPDPVDV--VVIATPAPTVPKVLEEAGIKGVKAAVIVSSGFSEAGNTELENWVK 116 Query: 115 ARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 A ++ R++GPNC G+ D+ + G + ++S+SG + + Sbjct: 117 AVAKQYGVRVLGPNCIGVYNAYSGFDTVFLPAERAGRPPPGPLALISQSGAVAAAIMDWA 176 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 ++ LG V G ++LE F AD+ + I + E E A QFL+ Sbjct: 177 ARRRLGLGFLVNYGNKA--DITETELLEGFAADDRVKVITIYIEGFKYPGE-ARQFLETA 233 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 K KKP+V + AG+ G + + G E ++AG+ A S + Sbjct: 234 KKIAAKKPVVAYKAGR---GGAAQRAVKSHTAAMAGSYEMYHGLFQQAGVIEASSVREMF 290 Query: 291 RSLVELLG 298 + + L Sbjct: 291 D-MAKALA 297 >gi|297527188|ref|YP_003669212.1| CoA-binding domain protein [Staphylothermus hellenicus DSM 12710] gi|297256104|gb|ADI32313.1| CoA-binding domain protein [Staphylothermus hellenicus DSM 12710] Length = 461 Score = 108 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 67/305 (21%), Positives = 112/305 (36%), Gaps = 25/305 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 + + +V G T K G + + + G I+P + + + +V Sbjct: 5 FFNPKSVAIV-GATIKEG-KVGRVIVENFKKRFKGKIYPVNPKYK---EVLGLKCYPSVK 59 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------VKAR 116 + E + VI VP + ++ E + + I+ G +K Sbjct: 60 DIPE--PIDLVVIVVPAPVVPQVLRDAGEKGVKAAIIISGGFRETGTEEGKQLEDEIKRI 117 Query: 117 LEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + R+IGPNC GI D+ + +KG + +S+SG + + Sbjct: 118 SMEYGIRIIGPNCLGIYDNWSGVDTFFLPDEKMMRPKKGYISFISQSGAFASALLDWMAY 177 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 +G S A+ G + ID++E DE T+ I+M E F+ K Sbjct: 178 RNIGVSRAISYGNK--IDVDDIDLIEYLREDEKTKLIIMYLEGLKPGR--GRLFIDKARK 233 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIV + AGKTA + + G + A+K+AG+ A S I Sbjct: 234 VVEKKPIVIYKAGKTARGSMAA---ASHTAALAGNYQLYRAAIKQAGLIEASSFDEIMDL 290 Query: 293 LVELL 297 LL Sbjct: 291 SKTLL 295 >gi|166366010|ref|YP_001658283.1| acetyl-CoA synthetase [Microcystis aeruginosa NIES-843] gi|166088383|dbj|BAG03091.1| acetyl-CoA synthetase [Microcystis aeruginosa NIES-843] Length = 902 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 101/267 (37%), Gaps = 24/267 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P +++P ++++ + + + +I P I +S+E ++ Sbjct: 56 LVNP------HPENRLDLPSYSSLEDIQAA--IDLVIITAPAPEIPAIIAQSVEKKVKCA 107 Query: 99 VCITEGIPVLDMV-----RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSV 153 + ++ G + R + R+IGP+ GI + + GS+ Sbjct: 108 LILSTGFRETGQMGENLLREIKAIAGQKLRIIGPHSSGISNLSQNLNATFSPILPKTGSI 167 Query: 154 GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVG 213 ++S+SG + + + E +G S + +G + ++ ++L D T+SIV+ Sbjct: 168 ALISQSGAIAAAVLDWSLSENVGFSHFISLG--VLLDVDWGELLYYLGDDPQTKSIVIYL 225 Query: 214 EIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN 273 E A FL + KPI+ T + HAG + S + Sbjct: 226 ESLN----NARSFLSSAREVALNKPIIAISRHSTDFDPTALSHAGKLTSDQLTLS----A 277 Query: 274 AMKEAGICIAPSPARIGRSLVELLGSL 300 A GI A + ++ ++L + Sbjct: 278 AFARCGIVEVQRLADL-LNITQVLAKI 303 >gi|320101090|ref|YP_004176682.1| branched-chain acyl-CoA synthetase (ADP-forming) subunit alpha [Desulfurococcus mucosus DSM 2162] gi|319753442|gb|ADV65200.1| branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit [Desulfurococcus mucosus DSM 2162] Length = 461 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 101/276 (36%), Gaps = 19/276 (6%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G Y V ++P+ + + ++ + + + +++ Sbjct: 21 GKIGYVVLRNIKGYGFPGKVYPVNPQ------ADEILGYKAYPSILDVPDE--VDVAIVT 72 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR----LEKSSSRLIGPNCPGIL 133 VP + E + + V IT G + V ++ R K R++GPN G + Sbjct: 73 VPADAVPKVMEECGRKGVKVAVIITSGFSEVGNVELENRIVETARKYGMRILGPNIFGYV 132 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 S KG++ ++S+SG L + T +G S + +G + + Sbjct: 133 YTPSSINATFGPLEVAKGNIALISQSGALGIALMGWTIMNEIGLSALLSVGN--MADLDV 190 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 ++ E D T I + E + +F++ K KKP+V AG++ Sbjct: 191 AELSEYLADDPNTRVITIYLEGIKPG--KGGEFVEKMRKVTLKKPVVVIKAGRSRRGAAA 248 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 ++G E A K++GI A + + Sbjct: 249 AASHTGSLAGSDNLYE---AAFKQSGIIRAYTVEEM 281 >gi|327311345|ref|YP_004338242.1| CoA-binding domain-containing protein [Thermoproteus uzoniensis 768-20] gi|326947824|gb|AEA12930.1| CoA-binding domain protein [Thermoproteus uzoniensis 768-20] Length = 462 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 60/309 (19%), Positives = 119/309 (38%), Gaps = 24/309 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGT--FHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPV 58 M+ L+ + LV G + K + + + + ++PK Sbjct: 1 MTPLISPKSVALV-GASPKQASVGYVIFENLANRFRGKAYFVNPKY--DVVEAWGKQFKF 57 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV----K 114 + +++E + + +I VP + E+ + + I+ G + + + Sbjct: 58 YKSISEIPDA--IDVVIIAVPAQVVPQVLEEAGKKGAKAAIIISSGFAEVGNKELEDELR 115 Query: 115 ARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 A + RL+GPNC G+ D+ + G + ++S+SG + + Sbjct: 116 ALGKMYGIRLLGPNCLGVYNAFDGFDTVFLPAERAGRPPAGPLALISQSGAVAASIMDWA 175 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 ++ G+G S V G G +++L F D+ + I + E E A +FL Sbjct: 176 ARRGIGLSIMVNYGNKADVGD--VELLRYFEKDDRIKVITIYIEGFKYPGE-AKRFLDAA 232 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + +KKPI+ + AG+ A R + H A+ G E ++AGI A + + Sbjct: 233 REVAKKKPIIAYKAGRGAAAQRAVKSHTAALA----GSYEMYRGLFRQAGIIEAANLRDM 288 Query: 290 GRSLVELLG 298 + + L Sbjct: 289 FD-MAKALA 296 >gi|307325799|ref|ZP_07604999.1| CoA-binding domain protein [Streptomyces violaceusniger Tu 4113] gi|306888587|gb|EFN19573.1| CoA-binding domain protein [Streptomyces violaceusniger Tu 4113] Length = 691 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 100/245 (40%), Gaps = 20/245 (8%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL------DMVR 112 + ++A +R A+ +VI VP +G A+ +++ A IV IT G L Sbjct: 69 YRSMAALPQR--ADLAVIAVPAAGFESAVEDALAAGARAIVGITAGFAELGTEGEARQTA 126 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + R+ ++ + L+GPNC G+L S + + G VG++S+SG + E ++ Sbjct: 127 LARRVREAGAVLLGPNCLGVLDSGSELY--LSSNPLPPGPVGLISQSGNMALELSRILAE 184 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLG S +G D++ + T+ I + E G + A Sbjct: 185 RGLGFSRFASLGNQA--DITVADLIRAYTVHPETKLIAVYSEDFGDGRDFVAA---AAEA 239 Query: 233 RGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 KP+V G + R H GA++S A + AGI SP ++ Sbjct: 240 TTMGKPVVLLTVGASEASVRGAKSHTGALVSDSSVI----DAACRAAGIDRVASPRQMAS 295 Query: 292 SLVEL 296 L L Sbjct: 296 LLEAL 300 >gi|294141080|ref|YP_003557058.1| GNAT family acetyltransferase [Shewanella violacea DSS12] gi|293327549|dbj|BAJ02280.1| acetyltransferase, GNAT family [Shewanella violacea DSS12] Length = 896 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 107/304 (35%), Gaps = 30/304 (9%) Query: 4 LVDKNTKVLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 L + + ++ G + +AG + + + + PK + V + Sbjct: 9 LFNPKSVAII-GASNTEKRAGNVIMRNLLAGGFSGPIMPVTPK------YQAVLGVLAYP 61 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------V 113 ++ + + ++I + + + G+ Sbjct: 62 SIEALPLKP--DLAIICTAADKVPSIVETLAQFGCKTAIINASGMGQQVDEMGINLLTLA 119 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 K ++ RL+GPN G++ P+ + + G + +S+S + + + + Sbjct: 120 KNNAKRYGMRLLGPNSLGMMLPNLGLNASLAHTSALPGKIAFVSQSAAICTTVLDWANNK 179 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G+G S + +G +F ++L+ D T +I++ + E FL Sbjct: 180 GIGFSCFISLG--DTTDIDFDELLDYLGRDSRTSAIMLYIDSIS----EKRHFLSAARAA 233 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRS 292 R KPI+ +G++ + A + +GG+ G + A + AG+ + + Sbjct: 234 SRNKPILVIKSGRSLEGTK----AAKLHTGGRTGNDAVYEAAFRRAGMLRVNDLIELFAA 289 Query: 293 LVEL 296 + L Sbjct: 290 VETL 293 >gi|72161715|ref|YP_289372.1| hypothetical protein Tfu_1311 [Thermobifida fusca YX] gi|71915447|gb|AAZ55349.1| conserved hypothetical protein [Thermobifida fusca YX] Length = 886 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 55/233 (23%), Positives = 93/233 (39%), Gaps = 15/233 (6%) Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 +VA+ E + +V+ VPP D E + +V IT + + A Sbjct: 247 PSVADLPEVP--DLAVVSVPPDAVLDVARACGEQGVGALVVITADLDTETSQELLAVCRW 304 Query: 120 SSSRLIGPNCPGI--LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 RL+GPNC G+ L+ R G G++ +SG + + S+ +G Sbjct: 305 HGMRLVGPNCFGVASLSDGVRLQATFAAEAPRPGQAGLVVQSGGIGITLLEHLSRLDVGI 364 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S+ V G D+L+ + D T +M E G+ +F + + GR+K Sbjct: 365 SSFVSTGNK--LDVSSNDLLQWWEDDPDTAMAIMHVESFGNP----RKFSRIARRLGRRK 418 Query: 238 PIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 PI+ VAG++ R H GA ++ ++AG+ A S + Sbjct: 419 PILTVVAGRSTAGQRAAASHTGASLTPALTTESL----FEQAGVVAARSLDEL 467 >gi|157962145|ref|YP_001502179.1| GCN5-like N-acetyltransferase [Shewanella pealeana ATCC 700345] gi|157847145|gb|ABV87644.1| GCN5-related N-acetyltransferase [Shewanella pealeana ATCC 700345] Length = 898 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 103/285 (36%), Gaps = 24/285 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +AG + + + + + PK G + P + + ++I Sbjct: 26 RAGNVLMKNLLSGGFSGPIMPVTPK---YEAVMGVLAYPNIQALPLI-----PDLAIICT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIP-------VLDMVRVKARLEKSSSRLIGPNCPG 131 S I + + + + G+ V + +++ ++ R++GPN G Sbjct: 78 TASSVPSIIETLAQFGCKVAIVMASGMADEFNEEGVSLLSQMQQFADRYGMRILGPNSLG 137 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P+ + + G + +S+S + + + +G+G S+ + +G Sbjct: 138 MILPNLGLNASLAHTSALPGKIAFVSQSAAICTTVLDWANNKGIGFSSFISLG--DANDI 195 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 F ++L+ D T++I++ + E FL R KPI+ +G++ G Sbjct: 196 NFDELLDYLGRDSKTDAILLYIDSIN----EKRHFLSAARAASRNKPILVIKSGRSIEGG 251 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +SG E A + AG+ + ++ L Sbjct: 252 NAAQLHTGGVSGNDAVYE---AAFRRAGMLRVNDLIELFAAVETL 293 >gi|14520570|ref|NP_126045.1| succinyl-coa synthetase alpha chain related protein [Pyrococcus abyssi GE5] gi|5457786|emb|CAB49276.1| acdA-1 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain [Pyrococcus abyssi GE5] Length = 472 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 106/298 (35%), Gaps = 28/298 (9%) Query: 11 VLVQGLT---GKAGTFHTEQAILYCQTQVV-GGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 V + G T GK G E + + G I+P V+ V+E Sbjct: 19 VAIIGATNKKGKVGNVIFENFKRNKEKGIFKGNIYPVNPK---LDEIDGYKVYHDVSELP 75 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKS 120 + T + +VI +P + + + E I ++ IT G L + + Sbjct: 76 DDT--DLAVIAIPAPAVPETMKKIAEKGIKAVIIITGGFGELGEEGKRMEQEILEIARAN 133 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGS----IFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 R+IGPNC G+ PD+ + + G + +S+SG + + G+G Sbjct: 134 GIRVIGPNCVGVYAPDTGVDTVFLPEEKMDRPKSGPIAFISQSGAFAAAMLDWAAMAGIG 193 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 V G + D++E F D+ + + E ++ +F++ + + Sbjct: 194 IGKMVSYGNK--IDVDDADLMEYFAQDDEIKVMTFYIE----GVKDGRKFMETAKRVTKI 247 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KPI+ +G+T + ++G + K+ GI A + Sbjct: 248 KPIIALKSGRTEYGAKAASSHTGSLAGQDVIYDAV---FKQTGIIRAEDFEHMFDLAK 302 >gi|332158036|ref|YP_004423315.1| succinyl-coa synthetase alpha chain related protein [Pyrococcus sp. NA2] gi|331033499|gb|AEC51311.1| succinyl-coa synthetase alpha chain related protein [Pyrococcus sp. NA2] Length = 487 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 103/298 (34%), Gaps = 28/298 (9%) Query: 11 VLVQGLT---GKAGTFHTEQAILYCQTQVV-GGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 V + G T GK G E + + G I+P V+ V+E Sbjct: 34 VAIIGATNKKGKVGNVIFENFKRNKEKGIFKGNIYPVNP---RLDEIDGYKVYHDVSELP 90 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKS 120 + T + +VI +P + + + E I ++ IT G + Sbjct: 91 DDT--DLAVIAIPAPAVPETMRKIAEKGIKAVIIITGGFGELGEEGKRMEREILEIARSH 148 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGS----IFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 R+IGPNC G+ PD+ + G + +S+SG + + G+G Sbjct: 149 GIRVIGPNCVGVYAPDTGVDTVFLPEEKMDRPPSGPIAFISQSGAFAAAMLDWAAMAGIG 208 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 V G + D++E F D+ + + E ++ +F++ + + Sbjct: 209 IGKMVSYGNK--IDVDDADLMEYFANDDQIKVMTFYIE----GVKDGRKFMETAKRVTKI 262 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KP++ +G++ + ++G + K+ GI A + Sbjct: 263 KPVIALKSGRSEYGAKAASSHTGSLAGQDVIYDAV---FKQTGIIRAEDFEHMFDLAK 317 >gi|14591547|ref|NP_143629.1| hypothetical protein PH1789 [Pyrococcus horikoshii OT3] gi|3258225|dbj|BAA30908.1| 472aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 472 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 105/298 (35%), Gaps = 28/298 (9%) Query: 11 VLVQGLT---GKAGTFHTEQAILYCQTQVV-GGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 V + G T GK G E + + G I+P V+ V+E Sbjct: 19 VAIIGATNKKGKVGNVIFENFKKNKEKGIFKGNIYPVNPK---LDEIEGYKVYHDVSELP 75 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKS 120 + T + +VI +P + + + E I ++ IT G L + + Sbjct: 76 DDT--DLAVIAIPAPAVPETMRKIGEKGIKSVIIITGGFGELGEEGKRMEQEILEIARAN 133 Query: 121 SSRLIGPNCPGILTPDSC----KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 R+IGPNC G+ PD+ + G + +S+SG + + G+G Sbjct: 134 GIRVIGPNCVGVYVPDTGVDTVFLPDEKMDRPPSGPIAFISQSGAFAAAMLDWAAMAGIG 193 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 V G + D++E F D+ + + E ++ +F++ + + Sbjct: 194 IGKMVSYGNK--IDVDDADLMEYFAHDDEIKVMTFYIE----GVKDGRKFMETAKRVTKI 247 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 KPI+ +G+T + ++G + K+ GI A + Sbjct: 248 KPIIALKSGRTEYGAKAASSHTGSLAGQDVIYDAV---FKQTGIIRAEDFEHMFDLAK 302 >gi|126466132|ref|YP_001041241.1| CoA-binding domain-containing protein [Staphylothermus marinus F1] gi|126014955|gb|ABN70333.1| CoA-binding domain protein [Staphylothermus marinus F1] Length = 461 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 67/305 (21%), Positives = 112/305 (36%), Gaps = 25/305 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 + + +V G T K G + + + G I+P + + + +V Sbjct: 5 FFNPKSVAIV-GATIKEG-KVGRVIVENFKKRFKGKIYPVNPKYE---EVLGLKCYPSVK 59 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK---- 119 + E + +I VP + ++ E + + I+ G K E+ Sbjct: 60 DIPE--PIDLVIIVVPAPVVPQVLRDAGEKGVKAAIIISGGFRETGTEEGKRLEEEVKKI 117 Query: 120 ---SSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 R+IGPNC GI D+ + +KG + +S+SG + + Sbjct: 118 SMEYGIRIIGPNCLGIYDNWSGVDTFFLPDEKMMRPKKGYISFISQSGAFASALLDWMAY 177 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 +G S A+ G + ID++E DE T+ I+M E F+ K Sbjct: 178 RNIGVSRAISYGNK--IDVDDIDLIEYLGEDEKTKLIIMYLEGLKPGR--GRLFIDKARK 233 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KKPIV + AGKTA + + G + A+K+AG+ A S I Sbjct: 234 VVEKKPIVIYKAGKTARGSMAA---ASHTAALAGNYQLYKAAIKQAGLIEASSFDEIMDL 290 Query: 293 LVELL 297 LL Sbjct: 291 SKTLL 295 >gi|224370841|ref|YP_002605005.1| SucC4 [Desulfobacterium autotrophicum HRM2] gi|223693558|gb|ACN16841.1| SucC4 [Desulfobacterium autotrophicum HRM2] Length = 892 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 106/294 (36%), Gaps = 21/294 (7%) Query: 13 VQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAAN 72 V G + + G+ + G I+P + + + F V T + Sbjct: 17 VIGASERKGSVGESIMKNLVEKGYKGNIYPVNPNHK---TIMGITAFPNVGAINRET--D 71 Query: 73 ASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIG 126 +V+ P + A + + + +A I V I+ G + + S R+IG Sbjct: 72 LAVVATPIAMAPEIVADCAKASIAGCVVISAGGKETGAPGVAIERSILDAAKPSGIRVIG 131 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNC GI+ + G + LS+SG + + +E +G S V +G Sbjct: 132 PNCLGIINTAVNLNASFAHQLPLPGRIAFLSQSGAVCTSVLDLAMREKVGFSHFVSLGS- 190 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + +F D+++ + +SIVM E + F+ R KPI+ +G+ Sbjct: 191 -MADVDFADMIDYLGTIKEVDSIVMYVENITN----IRNFMSAARSVSRIKPIIALKSGR 245 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 +A R ++G + A + AGI + E L L Sbjct: 246 SAAGARAAASHTGAMAGDDAIYD---AAFRRAGILRVNDFEELFDC-AEFLAKL 295 >gi|84501897|ref|ZP_01000055.1| acetyl-CoA synthetase [Oceanicola batsensis HTCC2597] gi|84389892|gb|EAQ02526.1| acetyl-CoA synthetase [Oceanicola batsensis HTCC2597] Length = 699 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 107/292 (36%), Gaps = 29/292 (9%) Query: 11 VLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 V V G +G + G + I + + I+PK + + +++EA Sbjct: 10 VAVIGASGDPKRIGGRPVDFLIRHGFDGPILPINPKSPQV------QGLAAYPSISEAP- 62 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSS 121 T + +VI +P A A+ + + V + G +D R+ + Sbjct: 63 -TTPDMAVIALPAPLAVQAVEQCAARGVRGAVIFSSGFSEVDADGAALQARMVDIAREGG 121 Query: 122 SRLIGPNCPGILTPDSCKIGIMPG----SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 RL+GPNC GI + + G V I+S+SG + GLG Sbjct: 122 MRLVGPNCLGIANVRHNLYATFTPGVEKHLPKPGGVSIVSQSGAFGSYCMTLVRMRGLGV 181 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 + G +F D + D+ T I+ E G + + + L+ R R+K Sbjct: 182 NIWATTGNS--CDVDFADAVAYCAQDDDTRVIMGYLE-GATDRDRLVEALE--MARAREK 236 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 P+V G++A A ++G + A ++ G+ A S + Sbjct: 237 PVVMMKVGRSAVGAEAAQSHTASLAGADAVYD---AAFRQYGVYRAQSVDEM 285 >gi|297156125|gb|ADI05837.1| hypothetical protein SBI_02716 [Streptomyces bingchenggensis BCW-1] Length = 721 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 99/277 (35%), Gaps = 21/277 (7%) Query: 17 TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVI 76 GK G I + ++P+ + + + +V + + +V Sbjct: 283 QGKIGNSVMRNLIDGGFPGEIHPVNPR------SDDILGRKAYKSVTDVP--GEVDVAVF 334 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEKSSSRLIGPNCPGI 132 +P A+ E IP V I G R+ A E+ RL+GPN G Sbjct: 335 AIPAKFVPAALEEVGRKGIPNAVLIPSGFAETGEHELQDRIVAIAEEHGVRLLGPNIYGY 394 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 + KG V + S+SG + + G S VG+G + Sbjct: 395 YSTWQDLCATFCTPYDVKGPVALTSQSGGIGMAILGFARTTRTGVSAIVGLGNK--SDVD 452 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 D+L F D T+ I M E ++ F++ KKP+V AG+TA + Sbjct: 453 EDDLLTYFGEDPNTQCIAMHLEDL----KDGRAFVEAARATVPKKPVVVLKAGRTAAGAK 508 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G ++G +D +++AG+ AP + Sbjct: 509 AAGSHTGALAGDDAVYDD---ILRQAGVIRAPGLNEM 542 >gi|258510881|ref|YP_003184315.1| CoA-binding domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477607|gb|ACV57926.1| CoA-binding domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 637 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 101/266 (37%), Gaps = 24/266 (9%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 + G ++P S V + ++ + E + +V+ VP S I + I Sbjct: 35 NSDFRGTVYPVNPS---AQSVAAVRAYPSLRDVPE--PVDLAVLVVPASQVLSVIDDVIA 89 Query: 93 AEIPLIVCITEGIPVLDM------VRVKARLEKSSSRLIGPNCPGILTPDS--CKIGIMP 144 A I ++ ++ G +D + +L + RLIGPN G++ DS Sbjct: 90 AGIKHVMILSSGFSDMDKPGEELEREISEKLRAAGCRLIGPNSLGLIQMDSETRLNASFA 149 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 + G V I S SG L + + GLG ++ V +G D+L+ + D Sbjct: 150 PKVPEYGHVAIASHSGALGITILDYAAYIGLGVASFVSLGNRA--DVSGNDLLQYWGDDP 207 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 A E I++ E G+ F + + R+KPI+ + +T + Sbjct: 208 AIEMILLYLESFGNP----RNFSRLARRITRQKPILAVKSARTPVG----HDVANARTVS 259 Query: 265 KGGAEDKINA-MKEAGICIAPSPARI 289 + + A ++AG+ + + Sbjct: 260 VAAEDATVEAMFQQAGVIRVDTLQEL 285 >gi|154243927|ref|YP_001409500.1| CoA-binding domain-containing protein [Xanthobacter autotrophicus Py2] gi|154163049|gb|ABS70264.1| CoA-binding domain protein [Xanthobacter autotrophicus Py2] Length = 727 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 103/252 (40%), Gaps = 23/252 (9%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 +HPK ++ P + ++ + +VI PP +++ A +P+ Sbjct: 67 AVHPK------LTEILDRPAYANLSAVP--GGVDLAVIVAPPGEIPAIMVDCAAARVPVA 118 Query: 99 VCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 + I+ G R+ A RLIGPNC G+++ + + + +G Sbjct: 119 IIISGGFAETGDAGRMLEQRIVATARSGGVRLIGPNCFGVISASAGLNASLGIGMPAQGG 178 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 + + ++SG A Q+ +E +G S V G + DVL+ F D T I M+ Sbjct: 179 IALYTQSGAYGMAAFTQSQEELIGFSRVVACGNK--VDLDETDVLQAFGEDPETRVIAML 236 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 E G + +F + + ++KPIV G++ R A ++ + Sbjct: 237 LESIG----DGRRFFEAAREIAQRKPIVILKTGRSEAGRRAAASHTAALATDSAI---TL 289 Query: 273 NAMKEAGICIAP 284 +A+++AGI + Sbjct: 290 SALRQAGIRVVD 301 >gi|170739807|ref|YP_001768462.1| CoA-binding domain-containing protein [Methylobacterium sp. 4-46] gi|168194081|gb|ACA16028.1| CoA-binding domain protein [Methylobacterium sp. 4-46] Length = 722 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 108/296 (36%), Gaps = 25/296 (8%) Query: 1 MSILVDKNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVP 57 M+ ++ +T V V G + GK G + I + IHPK + + Sbjct: 267 MNRIMRPDT-VAVIGASAEEGKIGNSVMKNLINGGYKGKIYPIHPK------ADTVLGLK 319 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + +V + + +V +P A+ E E + V I G + L Sbjct: 320 AYRSVKDVP--GPVDVAVFAIPAQFVAAALTECGEKGVAGAVLIPSGFAETGNEAGQREL 377 Query: 118 ----EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + + RL+GPN G +G + S+SG + + + Sbjct: 378 QEIGRRYNIRLMGPNIYGFYYMAKSLCATFCTPFDVQGQAALSSQSGGIGMAIIGFSRST 437 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G S VG+G + D+L F D++T I E ++ F + + Sbjct: 438 KMGVSAIVGLGNKSDIDED--DLLTFFEQDDSTRVIAQHCEDL----KDGRSFAEAARRV 491 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +KKP++ AG+T+ R ++G ED K+ G+ A S ++ Sbjct: 492 SKKKPVIVLKAGRTSAGARAASSHTGALAGNDKIYEDV---FKQCGVIRARSLRQL 544 >gi|209885939|ref|YP_002289796.1| N-acetyltransferase [Oligotropha carboxidovorans OM5] gi|209874135|gb|ACI93931.1| N-acetyltransferase [Oligotropha carboxidovorans OM5] Length = 898 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 84/221 (38%), Gaps = 11/221 (4%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV--KARLEKSSSRLIGPN 128 + VI P + D I E E V IT GI + +R + R+IGPN Sbjct: 70 PDLGVIITPAAVVPDLIKELGEKGTRAAVVITAGITRENGLRQAILDASKPHLLRIIGPN 129 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 G++ P + G++ +LS+SG + + + G+G S V +G + Sbjct: 130 TLGLVLPLAKLNASFAHMGAAPGNIALLSQSGAIATSLIDWAAANGIGFSQIVSLG--DM 187 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 + D L + D T +IVM E +F+ R KP++ G+ A Sbjct: 188 ADVDVADCLNMLAGDAQTRAIVMYLESV----PNPRKFMTAARAAARVKPVIAIKPGRHA 243 Query: 249 PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + +SG + A++ AGI A + Sbjct: 244 EAAKAAATHTGALSGVDRVVD---AALRRAGILRVNELADL 281 >gi|254784830|ref|YP_003072258.1| long-chain-fatty-acid--CoA ligase [Teredinibacter turnerae T7901] gi|237687112|gb|ACR14376.1| long-chain-fatty-acid--CoA ligase [Teredinibacter turnerae T7901] Length = 897 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 90/238 (37%), Gaps = 19/238 (7%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VR 112 + ++ + + ++I P D + + + ++ V G D Sbjct: 63 YRSLDDIDDH--IELAIITTPAHTVKDILKQCGKHKVKAAVIFAGGFAQPDEPGKVSEQA 120 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + K R IGPN GI P + G++ ++S+SG + + + Sbjct: 121 LVEIARKYGIRFIGPNSLGIAHPSTNINATFGPGEVASGNLALVSQSGAVCTAVMDWAAV 180 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 + +G S+ V IG +F D+L+ ++D T SI++ E +A F+ Sbjct: 181 QDIGFSSVVSIG--ACADLDFGDILDFLVSDGKTRSILLYVE----GIRDARSFMCGLRA 234 Query: 233 RGRKKPIVGFVAGKT-APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 R KP++ AG+ A T H A + G + A+K AG+ + Sbjct: 235 VARVKPVIVIKAGRHKAAIEVTQSHNSARV----GDDDVFAAALKRAGVVRGMHLGDL 288 >gi|302039142|ref|YP_003799464.1| putative acyl-CoA synthetase [Candidatus Nitrospira defluvii] gi|300607206|emb|CBK43539.1| putative Acyl-CoA synthetase (NDP forming) [Candidatus Nitrospira defluvii] Length = 911 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 96/249 (38%), Gaps = 19/249 (7%) Query: 49 WTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL 108 + + ++ E + +VI VP + + + +V IT G + Sbjct: 249 HAATIAGIHTYPSLRALPE--PVDLAVIAVPKDAVLSVVDDCAATGVRALVVITAGFAEV 306 Query: 109 DMVRVK------ARLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSG 160 + ++ + R++GPNC GIL D + GS+ + S+SG Sbjct: 307 GAEGRRLQGQLLEKVRQQGLRMVGPNCFGILNTDPAVRLNATFTSTFPLAGSIAMSSQSG 366 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 L + + + LG ST V +G D+L+ + D AT I++ E G+ Sbjct: 367 ALGLALLAASERLQLGLSTFVSVGNKADVSVN--DLLQYWENDPATNVILLYVESFGNP- 423 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +F + + R KPIV AG+T+ R G A ++ E ++ GI Sbjct: 424 ---RRFAQIARRVSRNKPIVVLKAGRTSSGKRAAGSHTAALAANDVAVEAL---FQQTGI 477 Query: 281 CIAPSPARI 289 A + + Sbjct: 478 LRAETLEDM 486 >gi|294634931|ref|ZP_06713449.1| acetyltransferase, GNAT family [Edwardsiella tarda ATCC 23685] gi|291091640|gb|EFE24201.1| acetyltransferase, GNAT family [Edwardsiella tarda ATCC 23685] Length = 890 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 99/282 (35%), Gaps = 23/282 (8%) Query: 15 GLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANAS 74 G+ G + + V ++P+ V ++++ + + Sbjct: 22 NQAGRNGHLVMQNLLRGGFNGPVMPVNPR------YQAVCGVLAYSSIEALP--MVPDLA 73 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILT 134 ++ V P I E + + P +K ++ RL+GPN G+L Sbjct: 74 ILCVNPRRNLTLIAELGAKGCRAAIVLAS--PASQAQALKQCAQQHGVRLLGPNSLGVLA 131 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 P G + +S+S ++ + Q +G S V +G + Sbjct: 132 PWQKLNASFSPVPILPGRLAFISQSAAVSNTILDWARQREIGFSLFVALGDSLDSDVD-- 189 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM 254 ++L+ D T +I++ E +A +FL R KPI+ +G++ + Sbjct: 190 ELLDYLARDAKTGAILLYLEHL----HDARRFLSAARSAARNKPILVIKSGRSPQARHVL 245 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G A G A D A++ AG+ + + ++ L Sbjct: 246 GEA-----PGLDIAYD--AAIQRAGLLRVQNTHELFSAVETL 280 >gi|167042411|gb|ABZ07138.1| putative CoA-binding domain protein [uncultured marine crenarchaeote HF4000_ANIW97P9] Length = 451 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 117/299 (39%), Gaps = 26/299 (8%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 S+ + + + V G + K G+ G ++P + + + Sbjct: 4 SVFLSPKS-IAVIGASDKQGSV-GRAITSNIMNGYKGTVYPISPTRETVFDQKA---YKS 58 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKA 115 V + + + +V+ + + E + I + IT G +D ++K Sbjct: 59 VLDVPD--PIDLAVVITKNTIVPVVLEECGKKGIKGAIVITAGFKEVDEEGKKLEQKLKD 116 Query: 116 RLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 K ++IGPNC G++ P + + G + ++S+SG + V S + Sbjct: 117 IATKYGVKVIGPNCLGVMNLEPKTMMNSTFLKITPKSGQIALVSQSGAICAALVEDASAQ 176 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE--EAAQFLKDEA 231 G+G S V +G DVL++ E T+ IVM E G+ +E + + + Sbjct: 177 GIGFSAVVSMGNKA--DMTENDVLKMLADHEQTKVIVMYLEDMGNGQEFLKVCKQITKYN 234 Query: 232 KRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + KKP++ AG++ + M H GA++ G + +K++G + + Sbjct: 235 EI--KKPVLVLKAGRSPEGAKAAMSHTGALL-GKDEIYDAV---LKQSGAIRVDTMEEL 287 >gi|242280464|ref|YP_002992593.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242123358|gb|ACS81054.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 702 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 91/246 (36%), Gaps = 17/246 (6%) Query: 50 TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 + F++V++ + ++I +PP A AI + E + V + G Sbjct: 52 GAEVHGLGAFSSVSQLPR--GIDLALICLPPDEAIQAIDDLSEILVRAAVVTSGGFGETG 109 Query: 110 M------VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLT 163 + + ++GPNC G++ + KG++ LS+SG + Sbjct: 110 REGYRLERELARTAKNHDMIILGPNCMGLMNTALGMNASLDPDFTLKGNIAFLSQSGAMC 169 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 A+ + EG+G S + +G V G +L DE T+ IV E ++ Sbjct: 170 STALDWANSEGVGFSKFISLGNKAVLGEAT--MLNYLANDEDTKVIVGYCETL----KDG 223 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 FL+ KKP++ AG+T R ++G A + G+ A Sbjct: 224 QDFLRTAYDTTFKKPLILLRAGETPSGARAASAHAGHLTGATTAY---NAAFNQTGVMQA 280 Query: 284 PSPARI 289 + Sbjct: 281 VDIEDM 286 >gi|16263072|ref|NP_435865.1| hypothetical protein SMa1146 [Sinorhizobium meliloti 1021] gi|14523730|gb|AAK65277.1| conserved hypothetical protein [Sinorhizobium meliloti 1021] Length = 899 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 102/283 (36%), Gaps = 16/283 (5%) Query: 9 TKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKER 68 T + + G + + G+ + G I P G+ + VA+ Sbjct: 13 TSLAIIGASDRDGSLGRVVIENVIRAGFEGEIWPINPKHDQVAGHR---CYRRVADVP-- 67 Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR--VKARLEKSSSRLIG 126 + +VI PP I + V IT GI +R + + R+IG Sbjct: 68 GVPDLAVIVTPPQTVPALIHDLGIRGTRAAVIITAGISADQDLRQAMLDAAKPFLLRIIG 127 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN G++ P + + G + +LS+SG + + + +G S V +G Sbjct: 128 PNTVGLIVPSAKLNASFAHLQAQPGGIALLSQSGAIATSLIDWAADNDVGFSKVVSLG-- 185 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + + D L+L D T +IVM E + +FL R KPIV AG+ Sbjct: 186 DMADADAGDFLDLLAGDPETHAIVMYLEAISNP----RKFLSAARAAARVKPIVAIKAGR 241 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 A + +SG + A++ AGI + Sbjct: 242 HAEAAKAAATHTGALSGADRVVD---AALRRAGILRIEGLGEL 281 >gi|255513334|gb|EET89600.1| CoA-binding domain protein [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 479 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 93/247 (37%), Gaps = 19/247 (7%) Query: 51 GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM 110 G + + + + E K+ + +VI +P + I E +A + IV ++ G + Sbjct: 70 GKILGLESYRNITEIKK--PIDLAVIAIPAKFTSELITECHKAGVKSIVVVSSGYAEIGE 127 Query: 111 VRV----KARLEKSSSRLIGPNCPGIL----TPDSCKIGIMPGSIFRKGSVGILSRSGTL 162 V++ K L+GPNC G++ D+ + G V +S+SG + Sbjct: 128 VKLEQELIDLANKYKIPLLGPNCLGVMDLKSRVDTLFLPTFKIDRPSIGGVSFVSQSGAV 187 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 + + EG G S + G V D+L DE T+ I+ E + Sbjct: 188 GSSTLDIIANEGFGLSKFISYGNASVIDET--DILNYLAKDEDTKVILYYIE----GVKR 241 Query: 223 AAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 F++ K KKPIV G+T + A ++G + ++ G+ Sbjct: 242 GRAFIEAAKKATLKKPIVVLKGGRTEAGSKAAHSHTASLAGSYEAYDAV---FRQFGLIR 298 Query: 283 APSPARI 289 A Sbjct: 299 ADDIQDF 305 >gi|78358248|ref|YP_389697.1| acetyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220653|gb|ABB40002.1| acetyltransferase, GNAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 911 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 80/233 (34%), Gaps = 16/233 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-------PVLDMVRVKARLEKSSSR 123 + ++I + E + V ++ G + V + R Sbjct: 70 PDLAIICTDADSTPFYLAELGKRGTQAAVLLSHGYFRFDRDRREVQRATVMDIAQAHGMR 129 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPNC G + P + G + +S+S +L + + +G+G S + + Sbjct: 130 ILGPNCLGFINPSVGVNASLAHREALPGRIAFVSQSDSLFTSVLDWATSKGVGFSHFISL 189 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G F D+L+ D T ++++ E A +F+ R KP++ Sbjct: 190 GDR--YDINFADILDYLNNDPGTRAVLLYLETISG----ARRFMSAARALARNKPVLVMK 243 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +GK+ + G + A + AG+ + ++ L Sbjct: 244 SGKSEASATAAAAHSGM---PPGSDDVYDTAFRRAGMLRVFDIDSLFDTVETL 293 >gi|329765910|ref|ZP_08257475.1| CoA-binding domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137616|gb|EGG41887.1| CoA-binding domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 698 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 121/299 (40%), Gaps = 28/299 (9%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTE--QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVF 59 S+ + + ++ G + K G+ I+ +V + P + + ++ + Sbjct: 4 SVFLSPKSIAII-GASDKRGSVGATITSNIMNGFKGIVYPVSPTRPTVFYKTA------Y 56 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR--- 116 +V + + + +VI + D + E + ++ ++ IT G +D K Sbjct: 57 KSVMDIPK--PVDLAVIVINNLLVADVLEECGKKKVKGVIIITAGFKEVDEEGAKREQKI 114 Query: 117 ---LEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 +K ++IGPNC G++ P + + G + ++S+SG + V S Sbjct: 115 KDIAKKYKIQIIGPNCLGVMNLDPKTMMNSTFLKVTPKSGKIALVSQSGAICAALVEDAS 174 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +G+G S + +G +D+L++ T+ IVM E G +E + Sbjct: 175 AQGIGFSAVISMGNKAA--MSEVDILKILANHNQTKVIVMYLEDMGDGQEFL--KVCKNI 230 Query: 232 KRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + KKP++ +G++ + M H GA++ G E +K++G + + Sbjct: 231 TKKLKKPVLVLKSGRSPEGAKAAMSHTGALM----GSDEIYDALLKQSGAIRVDTMEEL 285 >gi|163752043|ref|ZP_02159252.1| acetyltransferase, GNAT family protein [Shewanella benthica KT99] gi|161328095|gb|EDP99264.1| acetyltransferase, GNAT family protein [Shewanella benthica KT99] Length = 896 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 107/304 (35%), Gaps = 30/304 (9%) Query: 4 LVDKNTKVLVQGLTGKA---GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 L + + ++ G + K G + + + + + PK + V + Sbjct: 9 LFNPKSVAII-GASNKEKRAGNIIMKNLLAGGFSGPIMPVTPK------YQAVLGVLAYP 61 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------V 113 + + + ++I + + + G+ Sbjct: 62 NIEALPLKP--DLAIICTAADKVPSIVATLAQFGCKTAIINASGMGQQVNDMGINLLTLA 119 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 K ++ R++GPN G++ P+ + + G + +S+S + + + + Sbjct: 120 KNNAQRYGMRILGPNSLGMMLPNLGLNASLAHTCALPGKIAFVSQSAAICTTVLDWANNK 179 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G+G S+ + +G +F ++L+ D T +I++ + E FL Sbjct: 180 GIGFSSFISLG--DTTDIDFDELLDYLGRDSRTSAIMLYIDSIS----EKRHFLSAARAA 233 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRS 292 R KPI+ +G++ +A + +GG+ G + A + AG+ + + Sbjct: 234 SRNKPILVIKSGRSLEG----TNAARLHTGGRTGNDAVYEAAFRRAGMLRVNDLIELFAA 289 Query: 293 LVEL 296 + L Sbjct: 290 VETL 293 >gi|167646420|ref|YP_001684083.1| CoA-binding domain-containing protein [Caulobacter sp. K31] gi|167348850|gb|ABZ71585.1| CoA-binding domain protein [Caulobacter sp. K31] Length = 893 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 111/283 (39%), Gaps = 27/283 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPK---KGSTYWTGGNVNVPVFTTVAEAKERTAANAS 74 G G E + + ++P+ W+ ++P + + Sbjct: 25 GSVGQVVVENLLSGGFAGPIYLVNPRALSVAGATWSATIADLP-----------QSPELA 73 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR--VKARLEKSSSRLIGPNCPGI 132 V+ VP + I + A + + V ++ G+ + +R + + R++GPN G+ Sbjct: 74 VVAVPAATVPQVIADLGAAGVKVAVILSAGLTEANGLRQAMLDAAKPFGLRIVGPNGLGL 133 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 L P + G + ++S+SG L + + LG S V +G + + Sbjct: 134 LAPHARLNASFARGAPTPGGLALISQSGALVSGLIDWANTRQLGFSGIVSVG--DMAEVD 191 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 D+++LF AD T++I++ E AA+F+ R KP++ AG+ G+ Sbjct: 192 LGDLIDLFAADPHTDAILLYVE----GVTNAAKFMSAARAAVRIKPVIALKAGRNPASGK 247 Query: 253 TM-GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 + H GA+ G + A + AGI + + + Sbjct: 248 AVRSHTGALA----GAYDVHACAFERAGIVQVETLTDLFDAAA 286 >gi|271968313|ref|YP_003342509.1| acyl-CoA synthetase (NDP forming)-like protein [Streptosporangium roseum DSM 43021] gi|270511488|gb|ACZ89766.1| Acyl-CoA synthetase (NDP forming)-like protein [Streptosporangium roseum DSM 43021] Length = 881 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 23/260 (8%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 G ++P V + +V + +V+ VP G + + E E Sbjct: 233 GADFTGPVYPV---HREARAVAGVRAYPSVTAI--DGEVDLAVLAVPADGVIEVVKECAE 287 Query: 93 AEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSC--KIGIMP 144 + ++ ++ G + R++GPNC G+ D + Sbjct: 288 KGVRGLIVVSSGFGETGAEGRARQDELVRIARAYGLRVVGPNCLGVANTDPAVRLNATLA 347 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 +I +G VG S+SG L + + +Q G+G S+ V G D+L+ + D Sbjct: 348 ATIPGRGRVGFFSQSGALGTALLQRVAQRGMGISSFVSAGNRA--DVSGNDLLQYWEEDP 405 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 T+ I++ E G+ +F + + R+KPIV +G T G GHA V+ G Sbjct: 406 QTDVILLYLESLGNP----RKFARLARRISRRKPIVVVKSGGT-TQGVPTGHAAPVL-GL 459 Query: 265 KGGAEDKINAMKEAGICIAP 284 A + ++AG+ Sbjct: 460 PDTALSSL--FEQAGVIRVD 477 >gi|270718872|ref|ZP_06223274.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae HK1212] gi|270315494|gb|EFA27730.1| succinyl-CoA synthetase alpha chain [Haemophilus influenzae HK1212] Length = 102 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 67/106 (63%), Positives = 79/106 (74%), Gaps = 4/106 (3%) Query: 143 MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA 202 MP I +KG VGI+SRSGTLTYEAV QT+ EG GQST VGIGGDP+ G+ FID+LE F Sbjct: 1 MPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTCVGIGGDPILGSSFIDILERFQQ 60 Query: 203 DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 D TE+IVM+GEIGGSA EEA F+KD KP+V ++AG TA Sbjct: 61 DPETEAIVMIGEIGGSAXEEAXIFIKDHV----TKPVVAYIAGITA 102 >gi|119184194|ref|XP_001243025.1| hypothetical protein CIMG_06921 [Coccidioides immitis RS] Length = 467 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 54/118 (45%), Positives = 78/118 (66%), Gaps = 1/118 (0%) Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPIVG 241 +GGD + GT+F+D L++F D+ T I++VGEIGG+AE +AA+++KD +R KPI+ Sbjct: 1 MGGDVLAGTDFVDALKVFEHDDDTHGIIIVGEIGGTAEMDAAEWIKDYRRRTANPKPIMA 60 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V G AP GR MGHAGA + G+ A+ KI A+++AG I P + G + LLGS Sbjct: 61 LVGGIEAPHGRIMGHAGAWTAPGEPDAQMKIKALQDAGAVIVDHPEKFGEGMKTLLGS 118 >gi|3767592|dbj|BAA33855.1| ORF1 [Staphylococcus aureus] Length = 120 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 59/109 (54%), Positives = 81/109 (74%), Gaps = 4/109 (3%) Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 V GT FIDVL+ F D+ T+++VM+GEIGG+AEEEAA+++K KP+VGF+ G+T Sbjct: 1 VNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIKANM----TKPVVGFIGGQT 56 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 APPG+ MGHAGA+ISGGKG AE+KI + G+ A +P+ IG +L+E Sbjct: 57 APPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIEA 105 >gi|167623888|ref|YP_001674182.1| GCN5-like N-acetyltransferase [Shewanella halifaxensis HAW-EB4] gi|167353910|gb|ABZ76523.1| GCN5-related N-acetyltransferase [Shewanella halifaxensis HAW-EB4] Length = 900 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 101/285 (35%), Gaps = 24/285 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +AG + + + + + PK G + P + + ++I Sbjct: 26 RAGNVLMKNLLSGGFSGPIMPVTPK---YEAVMGVLAYPNIQALPLI-----PDLAIICT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV-------RVKARLEKSSSRLIGPNCPG 131 I + + + + G+ +++ ++ R++GPN G Sbjct: 78 TAGSVPAIIETLAQFGCKVAIVMASGMADEFNEDGISLLSQMQQFADRYGMRILGPNSLG 137 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P+ + + G + +S+S + + + +G+G S+ + +G Sbjct: 138 MILPNLGLNASLAHTSALPGKIAFVSQSAAICTTVLDWANNKGIGFSSFISLG--DANDI 195 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F ++L+ D T++I++ + E FL R KPI+ +G++ G Sbjct: 196 DFDELLDYLGRDSKTDAILLYIDSVN----EKRHFLSAARAASRNKPILVIKSGRSIEGG 251 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +SG E A + AG+ + ++ L Sbjct: 252 NAAQLHTGGVSGNDAVYE---AAFRRAGMLRVNDLIELFAAVETL 293 >gi|159041659|ref|YP_001540911.1| CoA-binding domain-containing protein [Caldivirga maquilingensis IC-167] gi|157920494|gb|ABW01921.1| CoA-binding domain protein [Caldivirga maquilingensis IC-167] Length = 477 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 61/303 (20%), Positives = 112/303 (36%), Gaps = 32/303 (10%) Query: 9 TKVLVQGLTGKAGTFHTEQAILYCQTQVVGG----IHPKKGSTYWTGGNVNVPVFTTVAE 64 + V V G T K G H I+ G ++P+ + ++ E Sbjct: 22 SSVAVIGATPKPG--HVGYVIMSNLLSKFKGKVILVNPR------YDSINGAKCYKSITE 73 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLE 118 + + +VI VP E+++ + ++ I+ G + V+ ++ Sbjct: 74 VNDE--VDLAVIAVPAPVVPQVTAEAVKKNVKALIIISGGFSEVGDEGRRLEDEVREIVK 131 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + R++GPNC G+ D+ KG + ++S+SG + + S+ Sbjct: 132 NTQVRVLGPNCIGVYNADNGLDTFFLPEDRMGRPPKGPIALISQSGAVAAAILDWASRRR 191 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 LG AV G ++LE + + I + E E +FL+ K Sbjct: 192 LGIGLAVNYGNK--LDVNESELLEYLANNSNVKVITIYMEGLKYPGE-GLRFLETAKKVT 248 Query: 235 RKKPIVGFVAGK-TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 + KP++ + AG+ A G H A+ G E A ++AG+ A S + Sbjct: 249 QIKPVIVYKAGRTKASAGAVASHTAALA----GDYEIYRGAFRQAGLIEANSVREMFDLA 304 Query: 294 VEL 296 L Sbjct: 305 KAL 307 >gi|218288389|ref|ZP_03492679.1| CoA-binding domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218241362|gb|EED08536.1| CoA-binding domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 637 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 100/265 (37%), Gaps = 22/265 (8%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 + G ++P S V + ++ + E + +V+ VP S I + I Sbjct: 35 NSDFRGTVYPVNPS---AQSVAAVRAYPSLRDVPE--PVDLAVLVVPASQVLSVIDDVIA 89 Query: 93 AEIPLIVCITEGIPVLDM------VRVKARLEKSSSRLIGPNCPGILTPDS--CKIGIMP 144 A I ++ ++ G +D + +L + RLIGPN G++ DS Sbjct: 90 AGIKHVMILSSGFSDMDKPGEELEREISEKLRAAGCRLIGPNSLGLIQMDSETRLNASFA 149 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 + G V I S SG L + + GLG ++ V +G D+L+ + D Sbjct: 150 PKVPEYGHVAIASHSGALGITILDYAAYIGLGVASFVSLGNRA--DVSGNDLLQYWGDDP 207 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 A E I++ E G+ F + + R+KPI+ + +T ++ Sbjct: 208 AIEMILLYLESFGNP----RNFSRLARRITRQKPILAVKSARTPVGQDVANSRTVSVAAE 263 Query: 265 KGGAEDKINAMKEAGICIAPSPARI 289 E ++AG+ + + Sbjct: 264 DATVE---AMFQQAGVIRVDTLQEL 285 >gi|170726876|ref|YP_001760902.1| GCN5-like N-acetyltransferase [Shewanella woodyi ATCC 51908] gi|169812223|gb|ACA86807.1| GCN5-related N-acetyltransferase [Shewanella woodyi ATCC 51908] Length = 896 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 86/234 (36%), Gaps = 18/234 (7%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------VKARLEKSSSR 123 + ++I + + + + G+ + K ++ R Sbjct: 70 PDLAIICTAAFRVPAIAETLAQFGCKVAIIMASGMADQNNEDGQSLLEETKQNAQRYGMR 129 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPN G++ P+ + + G + +S+S + + + +G+G S+ + + Sbjct: 130 ILGPNSLGMMLPNLGLNASLAHTSALPGKIAFVSQSAAICTTVLDWANNKGIGFSSFISL 189 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G +F ++L+ D T +I++ + FL R KPI+ Sbjct: 190 G--DATDIDFDELLDYLGRDSRTSAILLYVDSINKK----RHFLSAARAAARNKPILVIK 243 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVEL 296 +G++ +A + +GG G + A + AG+ + ++ L Sbjct: 244 SGRSFEG----SNAAKLHTGGLTGNDAVYEAAFRRAGMLRVNDLIELFAAVETL 293 >gi|170289657|ref|YP_001736473.1| Acyl-CoA synthetase (NDP forming) [Candidatus Korarchaeum cryptofilum OPF8] gi|170173737|gb|ACB06790.1| Acyl-CoA synthetase (NDP forming) [Candidatus Korarchaeum cryptofilum OPF8] Length = 459 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 102/246 (41%), Gaps = 19/246 (7%) Query: 52 GNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM- 110 + + + ++++ E + + V+ V I E+ + + I+ G + Sbjct: 50 EILGIKCYKSISDIPE--SVDLVVVAVRADATPAVIEEAADKGARGALVISGGFSEVGNW 107 Query: 111 ---VRVKARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLT 163 ++ K R+IGPNC GI P D+ + +G + ++++SG+L Sbjct: 108 ELERKLVEVARKRGIRVIGPNCLGIFDPKDKIDTLFLPERVIPRPGEGKIAVITQSGSLG 167 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 + +EG+G S V G + ++LE + DE T+ I E + Sbjct: 168 STVLTMMRKEGMGISKFVSYGNRA--DVDEGELLEYLMEDEDTQVIAAYIESVA----DG 221 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 +F++ + R+KP+V GKT+ R + ++ G +E +A+K++G + Sbjct: 222 RKFMESMRRASRRKPVVVLKGGKTSSGDRAVRSHTGSMA---GSSEIFHSAVKQSGGIVV 278 Query: 284 PSPARI 289 S Sbjct: 279 SSLGEF 284 >gi|224367413|ref|YP_002601576.1| hypothetical protein HRM2_02900 [Desulfobacterium autotrophicum HRM2] gi|223690129|gb|ACN13412.1| conserved hypothetical protein [Desulfobacterium autotrophicum HRM2] Length = 730 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 56/269 (20%), Positives = 104/269 (38%), Gaps = 26/269 (9%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P+ G V+ +VAE + +V+ +P S I + + I + Sbjct: 287 LVNPR------GGTITGRRVYRSVAEI--EGEVDLAVVTIPASQVMGLIPQFRQKGIKSM 338 Query: 99 VCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 + IT G + ++ ++GPN GI P GS Sbjct: 339 LLITSGFGETGPKGLALERELVKEASRAGIIVLGPNTMGICNPHRGFFCSGAHVHPMPGS 398 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 ++ +SG + + + +Q+ +G G G + + D +E F D T ++V+ Sbjct: 399 TALVCQSGNMGTQLLAFATQQDIGIRAFSGSGNEAM--VTIEDYMEAFEIDALTSTVVLY 456 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDK 271 E ++ +F + + KKP+V G+T G+ H GA+ S A+ Sbjct: 457 LESV----KDGRRFFESATRVSTKKPVVVLNGGRTRAGGKAASSHTGAMAS----DAKVM 508 Query: 272 INAMKEAGICIAPSPARIGRSLVELLGSL 300 A+K+AG+ P + L + SL Sbjct: 509 RAALKQAGVIQVEQPMELLD-LSAVFSSL 536 >gi|290956178|ref|YP_003487360.1| hypothetical protein SCAB_16611 [Streptomyces scabiei 87.22] gi|260645704|emb|CBG68795.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 710 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 101/288 (35%), Gaps = 24/288 (8%) Query: 9 TKVLVQGL---TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEA 65 + V V G GK G + + ++PK + + +V + Sbjct: 262 SSVAVIGASNEQGKIGNSVMRNLVDGGFAGEIHPVNPK------ADDILGRKAYKSVTDV 315 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEKSS 121 + +V +P A+ E +P V I G + A E+ Sbjct: 316 P--GEVDVAVFAIPAKFVASALEEVGRKGVPNAVLIPSGFAETGEHALQDEIVAIAERHG 373 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 RL+GPN G + KG V + S+SG + + G S V Sbjct: 374 IRLLGPNIYGYYSTWQDLCATFCTPYDVKGGVALTSQSGGIGMAILGFARATKTGVSAIV 433 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G+G + D+L F D TE I M E ++ F++ KKP+V Sbjct: 434 GLGNK--SDLDEDDLLTWFGEDPRTECIAMHLEDL----KDGRAFVEAARATVPKKPVVV 487 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 AG+TA + G ++G ED +K+AG+ AP + Sbjct: 488 LKAGRTAAGAKAAGSHTGALAGDDAVYED---ILKQAGVIRAPGLNEM 532 >gi|325968971|ref|YP_004245163.1| CoA-binding protein [Vulcanisaeta moutnovskia 768-28] gi|323708174|gb|ADY01661.1| CoA-binding domain protein [Vulcanisaeta moutnovskia 768-28] Length = 464 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 59/304 (19%), Positives = 118/304 (38%), Gaps = 32/304 (10%) Query: 1 MSI----LVDKNTKVLVQGLTGKAGTF--HTEQAILYCQTQVVGGIHPKKGSTYWTGGNV 54 MS+ L++ + ++ G T + G+ + +L + ++P + Sbjct: 1 MSVGLDYLLNPRSVAII-GATAREGSVGGVITRNLLTKFRGRIYLVNPS------YNELL 53 Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV-----LD 109 V+ +V E + + +VI P + E + + + V I+ G Sbjct: 54 GHRVYRSVLEIPDE--VDLAVIVTPAPTVPKVMSECVAKGVRVAVIISGGFSEVGEDGTR 111 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 + R + + R++GPNC GI D+ I + R G + ++S+SG + Sbjct: 112 LEREVKEVAQGRVRILGPNCIGIYNAFNGLDTFFIPQVRMERPRPGPIALISQSGAVAAA 171 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + ++ +G AV G +++L ++E IV+ E A+E + Sbjct: 172 ILDWAARRSIGVGLAVNYGNK--LDISEVELLGALASNENVRVIVIYIEGLKYADE-GRK 228 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAP 284 L+ + R KPIV + AG++ R + H A+ G E +++AG Sbjct: 229 LLEVMRQVTRIKPIVVYKAGRSKSSSRAVKSHTAALA----GNYEIYRAMLRQAGAIEVN 284 Query: 285 SPAR 288 + Sbjct: 285 NLMD 288 >gi|315127653|ref|YP_004069656.1| acyl-CoA synthetase, NAD(P)-binding protein, ATP-binding protein [Pseudoalteromonas sp. SM9913] gi|315016167|gb|ADT69505.1| acyl-CoA synthetase, NAD(P)-binding protein, ATP-binding protein [Pseudoalteromonas sp. SM9913] Length = 888 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 103/293 (35%), Gaps = 23/293 (7%) Query: 1 MSILVDKNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVP 57 +S + ++ V V G + +AG + + + P T + + Sbjct: 6 ISQFFNPSS-VAVIGASNTPTRAGNVVMRNLLQGGFKGPIMPVTPN-----HTAVHGVL- 58 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + ++ + + +VI + I + + I +G+ +K Sbjct: 59 AYPSIEALPKVP--DLAVICTNKNTLMKIIEQLGTLGCHSAIIIADGLTSTQKQELKDNA 116 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 L+G NC G+L P ++ G + +S+S + + + +G Sbjct: 117 ANHKVTLLGSNCLGLLIPHIGLNASFSHTVATPGKLAFVSQSAAVCSTILDWAKNKEIGF 176 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V +G EF ++L+ D T++I++ + + F+ K Sbjct: 177 SYFVSMG--DCLDIEFDEILDFLGRDAKTKAILLYIDNIN----DIRSFISAARAAAFSK 230 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 P++ G+T+ A + +GGK ++ +A + AG+ + Sbjct: 231 PVIAIKTGRTSAGAL----AAEIHTGGKQSSDAVYDAMFQRAGMLRVNDLREL 279 >gi|253745065|gb|EET01173.1| Acetyl-CoA synthetase [Giardia intestinalis ATCC 50581] Length = 715 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 107/282 (37%), Gaps = 25/282 (8%) Query: 17 TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVI 76 TGK G T V I+P + + ++ E E + +V+ Sbjct: 22 TGKVGNTVVTNIKESGYTGKVFPINP------TAPEILGYKAYKSILEVPE--NVDVAVV 73 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCP 130 +P A E + ++ +V IT G + + + RL+GPNC Sbjct: 74 VIPSKAVLAAAKECAQKKVKSLVVITAGFKEIGGEGVQMEQDLIKVCKDAGIRLVGPNCL 133 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 GI+TP+ + KGS+ LS+SG + + G+G S + +G Sbjct: 134 GIVTPN--LNCTFASAKPSKGSIAFLSQSGAMLTSILDWALTNGIGFSNFISLGNKA--D 189 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 + +D++ D T+ I++ E + + +FL+ KKP++ +G +A Sbjct: 190 VDEVDLIMEVAEDPNTDIILLYLE----SIVDGRKFLEQIPTCVHKKPVIILKSGISAAG 245 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 ++G + A ++AG+ A + + + Sbjct: 246 AAAASSHTGALAGNDIAFDL---AFEKAGVLRAATMSDLFDL 284 >gi|319942556|ref|ZP_08016865.1| hypothetical protein HMPREF9464_02084 [Sutterella wadsworthensis 3_1_45B] gi|319803852|gb|EFW00774.1| hypothetical protein HMPREF9464_02084 [Sutterella wadsworthensis 3_1_45B] Length = 746 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 108/282 (38%), Gaps = 26/282 (9%) Query: 26 EQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGD 85 ++ + Y + ++PK G + +T+V E + + +VI V Sbjct: 70 KRLLEYGFKGHIYPVNPK------GGEIEGLRAYTSVNELPD--GVDLAVIVVNAKFVLS 121 Query: 86 AIIESIEAEIPLIVCITEGIPVLDMVRV------KARLEKSSSRLIGPNCPGILT--PDS 137 + E I +V I+ G A++ + R++GPNC G++ P+ Sbjct: 122 TVDECAARGIKGLVVISAGFKETGGEGRQLEEALAAKVRANGMRMVGPNCLGVVNTNPNV 181 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 S+ G +G +S+SG L + +G + + IG L Sbjct: 182 RLDACFAESLPVAGDIGFVSQSGALGGGILNILKDLNVGFAQFISIGNQA--DVNAETAL 239 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 E + D + I++ E + + A F K + +KKPIV AG++A Sbjct: 240 EYWENDPDVKQILLYME----SIPDPANFRKLATRISKKKPIVALKAGRSAAGASAASSH 295 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++GG A+ +K++G+ S + + ++ + Sbjct: 296 TGSLAGGDRAADAL---LKQSGVIREMSLKDLFST-AKVFAN 333 >gi|257056724|ref|YP_003134556.1| acyl-CoA synthetase (NDP forming) [Saccharomonospora viridis DSM 43017] gi|256586596|gb|ACU97729.1| acyl-CoA synthetase (NDP forming) [Saccharomonospora viridis DSM 43017] Length = 926 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 97/266 (36%), Gaps = 27/266 (10%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P V + +V E + +V+ VP + ++ + Sbjct: 247 FAGPVYPVNPEHV---AVRGVRAYKSVLEIP--GPVDLAVVAVPADEVEAVLDGALAKGV 301 Query: 96 PLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSI 147 +V ++ G +R+ R++GPN G+L D + + Sbjct: 302 QALVIVSAGFAESGPHGLHAELRLVKAARAHGMRVVGPNALGVLNTDPTVRLNATLAPRL 361 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 R+G G +SG L + GLG ST V G D+L+ + D T+ Sbjct: 362 PRRGRTGFFCQSGALGIAILADAEARGLGLSTFVSAGNRA--DVSGNDLLQYWETDPRTD 419 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 +++ E G+ +F + + R KPIV +G+ A + + Sbjct: 420 VVLLYLESFGNP----RKFARLARRLARSKPIVAVKSGRHAV-------RPQLAATSTEI 468 Query: 268 AEDKINA-MKEAGICIAPSPARIGRS 292 E + A ++AG+ + A++ + Sbjct: 469 DESSVQALFEQAGVVRVDTLAQLFDT 494 >gi|315231560|ref|YP_004071996.1| hypothetical protein TERMP_01798 [Thermococcus barophilus MP] gi|315184588|gb|ADT84773.1| hypothetical protein TERMP_01798 [Thermococcus barophilus MP] Length = 443 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 99/263 (37%), Gaps = 24/263 (9%) Query: 37 VGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIP 96 + I+PK G +G + E+T + ++I +P I E + I Sbjct: 40 ITPINPKGGEVEVSGKRFEIK-----KRLDEKT--DVAIIAIPAKLVPGLIEEIGDK-IR 91 Query: 97 LIVCITEGIPVLDMVRV----KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 V I+ G + + + + + R+IGPNC GI G + +KG Sbjct: 92 GAVVISAGFSEIGNMELERELVEKAREKGVRIIGPNCAGIFGVHGKFFGSFEVRV-KKGG 150 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 + ++S+SG A+ ++EG+G S V G D L F D T++I + Sbjct: 151 LALISQSGAFGGAALAMGNEEGIGFSAFVSYGNA--TDLTESDFLRYFADDRNTKAIALY 208 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDK 271 E ++ +F+ KKP++ AGK+ R H G++ G E Sbjct: 209 IE----GVKDGRKFIDALKYATPKKPVIILKAGKSRSGSRAAQSHTGSLA----GSYEIY 260 Query: 272 INAMKEAGICIAPSPARIGRSLV 294 A + G + + Sbjct: 261 KAAFNQFGAIEVEEMEELFDAAK 283 >gi|147919943|ref|YP_686304.1| acetyl-coa synthetase (ADP-forming), alpha subunit [uncultured methanogenic archaeon RC-I] gi|110621700|emb|CAJ36978.1| acetyl-coa synthetase (ADP-forming), alpha subunit [uncultured methanogenic archaeon RC-I] Length = 460 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 94/266 (35%), Gaps = 25/266 (9%) Query: 37 VGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIP 96 V ++P + G F V + + V+ VP A I + + Sbjct: 44 VFPVNPS--AQEILGKQC----FPDVTSIPDE--VDLGVVIVPAQAAPSVIDDCGRKGVG 95 Query: 97 LIVCITEGIPVLDMV------RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + IT G + +K + + R++GPN G + + + + Sbjct: 96 ALCVITSGFSEVGKEGAALEEDLKKKAKAYGMRMLGPNTMGFVNRSISLNASIVPRMPYR 155 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G + +S+SG L + LG + + G D+LE F DE T +I Sbjct: 156 GEISFISQSGALGLALTDWSIGSRLGLNCIISTGNKA--DVSEADLLEYFDQDEDTWTIS 213 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 M E ++ +F++ +K KKP++ AG + R ++G + Sbjct: 214 MYIE----GLKDGRRFIEAASKV--KKPMLAIKAGVSQAGARAAASHTGSLAGSDAVYDS 267 Query: 271 KINAMKEAGICIAPSPARIGRSLVEL 296 A ++ G+ + + + + Sbjct: 268 ---AFRQCGVIRVEGVEEMFDAAMAV 290 >gi|302525554|ref|ZP_07277896.1| acetyl-CoA synthetase [Streptomyces sp. AA4] gi|302434449|gb|EFL06265.1| acetyl-CoA synthetase [Streptomyces sp. AA4] Length = 947 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 98/266 (36%), Gaps = 27/266 (10%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P V + +V + + + +++ VP + + + Sbjct: 286 FAGAVYPVNPEHR---SVRGVRAYPSVLDIPD--PVDLALVAVPAEAVESVLDACLAKGV 340 Query: 96 PLIVCITEGIPVLDMVRVKARLE------KSSSRLIGPNCPGILTP--DSCKIGIMPGSI 147 +V ++ G + + A L R++GPN G+L D + + Sbjct: 341 KTLVIVSGGFAESGPLGLHAELRLVGEARAHGMRVVGPNALGVLNTAKDVRLNATLAPRL 400 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 ++G G +SG L + GLG ST V G D+L+ + D T+ Sbjct: 401 PKRGRTGFFCQSGALGTAILADAGSRGLGLSTFVSAGNRA--DVSGNDLLQYWETDPDTD 458 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 +++ E G+ +F + + R KPIV +G+ A + + Sbjct: 459 LVLLYLESFGNP----RKFARLARRLARSKPIVAVKSGRHAV-------RPQLAATSAEV 507 Query: 268 AEDKINA-MKEAGICIAPSPARIGRS 292 E + A ++AG+ S A++ + Sbjct: 508 DEASVQALFEQAGVVRVESLAQLFDT 533 >gi|212224246|ref|YP_002307482.1| acetyl-CoA synthetase I (NDP forming), alpha subunit [Thermococcus onnurineus NA1] gi|212009203|gb|ACJ16585.1| acetyl-CoA synthetase I (NDP forming), alpha subunit [Thermococcus onnurineus NA1] Length = 461 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 92/228 (40%), Gaps = 20/228 (8%) Query: 81 SGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILT 134 + E + + ++ I+ G L K K R++GPN G++ Sbjct: 81 RFVPQVVEECGKKGVKVLPIISSGFGELGEEGKKIERQLVETANKYGMRILGPNIFGVVY 140 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 + + G++ ++S+SG L + T E +G S V +G + Sbjct: 141 TPAKMNATFGPTDVMPGNLALISQSGALGIALMGWTILEKVGLSAVVSVGNK--SDIDDA 198 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM 254 D+LE F D+ T++I++ E ++ +F++ + +KPI+ AG++ + Sbjct: 199 DLLEFFKTDDNTKAILIYME----GVKDGRRFMEVAKEVSMEKPIIIIKAGRSERGAKAA 254 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL--VELLGSL 300 ++G E A K++G+ A + IG + L +L Sbjct: 255 ASHTGSLAGADKIYE---AAFKQSGVLRALT---IGEAFDWARTLSNL 296 >gi|127512967|ref|YP_001094164.1| GCN5-related N-acetyltransferase [Shewanella loihica PV-4] gi|126638262|gb|ABO23905.1| GCN5-related N-acetyltransferase [Shewanella loihica PV-4] Length = 900 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 104/286 (36%), Gaps = 26/286 (9%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +AG + + + + PK + V + + + + ++I Sbjct: 26 RAGNVVMRNLLSSGFSGPIMPVTPK------YDAVMGVLAYPNIEALPLKP--DLAIICT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIP-------VLDMVRVKARLEKSSSRLIGPNCPG 131 S + + + + G+ + + +A ++ R++GPN G Sbjct: 78 AASRVPAIVERLAQFGCKVAIINASGMANQLDEEGLNLLTLTRAHAKRYGMRILGPNSLG 137 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P+ + + G + +S+S + + + +G+G S+ + +G Sbjct: 138 MMLPNLGLNASLAHTSALPGKIAFVSQSAAICTTVLDWANNKGIGFSSFISLG--DATDI 195 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F ++L+ D T +I++ + E FL R KPI+ +G++ Sbjct: 196 DFDELLDFLGRDSRTTAIMIYIDSVN----EKRHFLSAARAAARNKPILVIKSGRSLEGT 251 Query: 252 RTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVEL 296 A + +GG+ G + A + AG+ + ++ L Sbjct: 252 T----AAKLHTGGEVGNDAVYEAAFRRAGMLRVNDLVELFAAVETL 293 >gi|254173177|ref|ZP_04879850.1| AcdA-4 acetate--coA ligase (ADP-forming) , alpha chain [Thermococcus sp. AM4] gi|214032586|gb|EEB73415.1| AcdA-4 acetate--coA ligase (ADP-forming) , alpha chain [Thermococcus sp. AM4] Length = 445 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 98/260 (37%), Gaps = 22/260 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK GS G + K + ++I +P I E I I Sbjct: 42 PVNPKGGSVEVAGKTFEI-------RKKLEEPVDTAIIAIPARLVPSLIEE-IGPLIKGA 93 Query: 99 VCITEGIPVLDMVRVKAR----LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 V I+ G + ++ +K R+IGPNC GI G + + G + Sbjct: 94 VVISAGFSEIGNEELERELVERAKKHGVRVIGPNCAGIFGVHGKFFGSFEVRV-KPGGLA 152 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++S+SG A+ + EG+G S V G D LE F DE T++I + E Sbjct: 153 LISQSGAFGGAALAMGNDEGIGFSAFVSYGNA--SDLNESDFLEYFADDENTKAIALYIE 210 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 ++ +FLK +KP++ AGK+A + ++ G E A Sbjct: 211 ----GVKDGRRFLKALRYASERKPVIVLKAGKSASGAKAAASHTGSLA---GSYEIYRAA 263 Query: 275 MKEAGICIAPSPARIGRSLV 294 K+AG + + Sbjct: 264 FKQAGAIEVEEMEELFDAAK 283 >gi|240102344|ref|YP_002958652.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA) [Thermococcus gammatolerans EJ3] gi|239909897|gb|ACS32788.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA) [Thermococcus gammatolerans EJ3] Length = 537 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 99/260 (38%), Gaps = 22/260 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK GS G + + + ++I +P I E I I Sbjct: 42 PVNPKGGSVEVAGRVFEI-------RERLDEPVDTAIIAIPAKFVPGLIDE-IGPRIKGA 93 Query: 99 VCITEGIPVLDM----VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 V I+ G + + + K RLIGPNC GI G + + G + Sbjct: 94 VVISAGFSEVGNADLERELVEKARKHGVRLIGPNCAGIFGVHGKFFGSFEVRV-KPGGLA 152 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++S+SG A+ ++EG+G S V G D LE F DE T++I + E Sbjct: 153 LISQSGAFGGAALAMGNEEGIGFSAFVSYGNAA--DLNESDFLEYFADDENTKAIALYIE 210 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 ++ FLK + ++KP++ AGK+A + ++ G E A Sbjct: 211 ----GVKDGRHFLKALSYASKRKPVIVLKAGKSASGAKAAASHTGSLA---GSYEIYRAA 263 Query: 275 MKEAGICIAPSPARIGRSLV 294 K+AG + + Sbjct: 264 FKQAGAIEVEEMEELFDAAK 283 >gi|254167988|ref|ZP_04874836.1| CoA binding domain protein [Aciduliprofundum boonei T469] gi|289595996|ref|YP_003482692.1| CoA-binding domain protein [Aciduliprofundum boonei T469] gi|197623031|gb|EDY35598.1| CoA binding domain protein [Aciduliprofundum boonei T469] gi|289533783|gb|ADD08130.1| CoA-binding domain protein [Aciduliprofundum boonei T469] Length = 464 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 105/256 (41%), Gaps = 30/256 (11%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P KG V+ ++ + E + SVI +P I E + + I Sbjct: 42 PVNP-KGGQILGFK-----VYPSINDVPEE--VDLSVITLPAE-VTVKIFEDVAKKSKFI 92 Query: 99 VCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIM----PGSIF 148 + I G ++ +K ++R+IGPN GI P + + Sbjct: 93 IPIAGGFGETGKEGKERERKILEIAKKYNARIIGPNTVGIYIPSTGVNTALVVPERSRFP 152 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 G + +++SG L + S +G S+ + +G ++L+ F DE ++ Sbjct: 153 GDGDIAFITQSGALGLLTMDSVSMYDVGFSSFINLGNR--VDVNENELLQYFGEDEKSKV 210 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 I+M E + E F++ RKKPIV AG+T G+ A ++ +G GG+ Sbjct: 211 IIMYIESFANGRE----FMRVAKNVSRKKPIVVLKAGRTKRGGK----AASLHTGALGGS 262 Query: 269 EDKIN-AMKEAGICIA 283 + + A K+ G+ A Sbjct: 263 DAVADGAFKQCGVIRA 278 >gi|260906704|ref|ZP_05915026.1| CoA-binding domain protein [Brevibacterium linens BL2] Length = 890 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 62/304 (20%), Positives = 110/304 (36%), Gaps = 36/304 (11%) Query: 9 TKVLVQGLTGK---AGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V+V G + K G T + +HP V + T+ + Sbjct: 198 TSVVVIGASRKRNSTGHLLIRNITAAKFTGDLWVVHP------EADQIAGVQAYRTLEDL 251 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEK 119 A+ +VI VP A + + E + ++ I+ G R+ A Sbjct: 252 P--GTADLAVIAVPAESATEVVQECAAHGVKAVLVISSGFAETGDEGAELQRRMVATSRA 309 Query: 120 SSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 R++GPN G++ D + + GS+G+ S+SG L + GLG Sbjct: 310 YGMRVVGPNSFGLVNEAADVSLNASLAPFLPDSGSLGLFSQSGALGTALLSAAKNRGLGI 369 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 ST V G DVL+ + D T+++ + E G+ +F + + R K Sbjct: 370 STFVSAGNRA--DMSGNDVLQYWEEDPDTKTVGLYLESIGNP----RKFSRIARRVSRVK 423 Query: 238 PIVGFV---AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 PI+ G+ PPG ++ + +AG+ A + ++ L Sbjct: 424 PIIVIKSDLTGRELPPGH-------IVRTSSLAPNTLDQVLGQAGVIRADTIHQLFD-LA 475 Query: 295 ELLG 298 ++ Sbjct: 476 QVFS 479 >gi|146342157|ref|YP_001207205.1| hypothetical protein BRADO5307 [Bradyrhizobium sp. ORS278] gi|146194963|emb|CAL78988.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278] Length = 897 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 15/234 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD---MVRVKARLEKSSSRLIGP 127 VI PP+ D I + + IT G+ D + + +K RL+GP Sbjct: 70 PEIIVITTPPASIPDLIERAGALGTAGALIITSGLGHGDGSVADQAERAAQKHGMRLVGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 NC GI+ P + G++ ++S+SG + V +Q G+G S V IG Sbjct: 130 NCLGIMMPTIKLNASFSAHMPVAGNLALISQSGAIAAGMVDWAAQRGVGFSGIVSIGDQL 189 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + L+ F D T +I++ E A ++A +F+ R KP+V +G+ Sbjct: 190 DVDLADL--LDHFALDGGTRAILLYIE----AVKDARKFMSAARAAARVKPVVVVKSGRG 243 Query: 248 APPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVELLGSL 300 A + A A +G GA+ A + AG+ + E LG + Sbjct: 244 AVGAK----AAATHTGALAGADAVYEAAFRRAGVLRVSDLRELFDC-AETLGRV 292 >gi|254168160|ref|ZP_04875007.1| CoA binding domain protein [Aciduliprofundum boonei T469] gi|197622926|gb|EDY35494.1| CoA binding domain protein [Aciduliprofundum boonei T469] Length = 451 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 30/256 (11%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P KG V+ ++ + E + SVI +P I E + + I Sbjct: 29 PVNP-KGGQILGFK-----VYPSINDVPEE--VDLSVITLPAE-VTVKIFEDVAKKSKFI 79 Query: 99 VCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIM----PGSIF 148 + I G ++ +K ++R+IGPN GI P + + Sbjct: 80 IPIAGGFGETGKEGKERERKILEIAKKYNARIIGPNTVGIYIPSTGVNTALVVPERSRFP 139 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 G + +++SG L + S +G S+ + +G ++L+ F DE ++ Sbjct: 140 GDGDIAFITQSGALGLLTMDSVSMYDVGFSSFINLGNR--VDVNENELLQYFGKDEKSKV 197 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 I+M E + E F++ RKKPIV AG+T GR A ++ +G GG+ Sbjct: 198 IIMYIESFANGRE----FMRVAKNVSRKKPIVVLKAGRTKRGGR----AASLHTGALGGS 249 Query: 269 EDKIN-AMKEAGICIA 283 + + A K+ G+ A Sbjct: 250 DAVADGAFKQCGVIRA 265 >gi|296270349|ref|YP_003652981.1| CoA-binding domain-containing protein [Thermobispora bispora DSM 43833] gi|296093136|gb|ADG89088.1| CoA-binding domain protein [Thermobispora bispora DSM 43833] Length = 887 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 97/262 (37%), Gaps = 27/262 (10%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P V + +V+ + +V+ VP G D + E E + Sbjct: 227 FTGPVYPV---HREVRAVAGVRAYKSVSAI--DGEVDLAVLAVPAEGVLDLVRECAEKGV 281 Query: 96 PLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSI 147 ++ ++ G + R++GPNC GI D + ++ Sbjct: 282 KGLIVVSSGFGETGPEGRARQQELVRIARAYGMRVVGPNCLGIANTDPAVRLNATLAATL 341 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 +G VG +SG L + + +Q G+G ST V G D L+ + D AT+ Sbjct: 342 PSRGRVGFFCQSGALGTALLQRVAQRGMGISTFVSAGNRA--DVSGNDCLQYWEEDPATD 399 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 I++ E G+ +F + + +KKPIV + PG GHA V+ Sbjct: 400 VILLYLESLGNP----RKFARLARRISKKKPIVMVKS-----PGVPPGHAAPVLGLPDDA 450 Query: 268 AEDKINAMKEAGICIAPSPARI 289 ++ G+ ++ Sbjct: 451 LRSL---FEQTGVIRVDDLTQL 469 >gi|332701485|ref|ZP_08421573.1| CoA-binding domain protein [Desulfovibrio africanus str. Walvis Bay] gi|332551634|gb|EGJ48678.1| CoA-binding domain protein [Desulfovibrio africanus str. Walvis Bay] Length = 893 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 51/233 (21%), Positives = 86/233 (36%), Gaps = 16/233 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD-------MVRVKARLEKSSSR 123 + +VI PPS D I + + + I G L+ + R Sbjct: 70 PDMAVICTPPSHTPDYIRKLGKRGTRAAIIIGPGFATLESEERGRLEYETHEAAKHYGMR 129 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPNC G+++P + + + +G + +++S +L + G+G S + + Sbjct: 130 LLGPNCMGLISPSAGLNASLAHTDAAQGRIAFVTQSDSLFTTVLDWAQGSGIGFSHFISL 189 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G F VL+ +D T SI++ E + +A F+ R KPI+ Sbjct: 190 GDQ--LDVNFAAVLDYLGSDTMTRSILLYVE----SICDARSFMSAARASARNKPILVIK 243 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G P R A A+ D A + AGI S + L Sbjct: 244 PGGNVPEYRPE-QACALRQEDADSVYDV--AFRRAGIVRVNSVDGLFDGARTL 293 >gi|307332145|ref|ZP_07611231.1| CoA-binding domain protein [Streptomyces violaceusniger Tu 4113] gi|306882210|gb|EFN13310.1| CoA-binding domain protein [Streptomyces violaceusniger Tu 4113] Length = 711 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 98/277 (35%), Gaps = 21/277 (7%) Query: 17 TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVI 76 GK G I + ++PK + + +V + + +V Sbjct: 273 QGKIGNSVMRNLIDGGFPGEIHPVNPK------ADDILGRKAYKSVTDVP--GEVDVAVF 324 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEKSSSRLIGPNCPGI 132 +P A+ E IP V I G R+ E+ R++GPN G Sbjct: 325 AIPAKFVPAALEEVGRKGIPNAVLIPSGFAETGEHELQRRIVEIAEEYGVRVLGPNIYGY 384 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 + KG V + S+SG + + G S VG+G + Sbjct: 385 YSTWQDLCATFCTPYDVKGPVALTSQSGGIGMAILGFARTTKTGVSAIVGLGNK--SDVD 442 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 D+L F D+ T+ I M E ++ F++ +KP+V AG+TA + Sbjct: 443 EDDLLTWFAEDDRTQCIAMHLEDL----KDGRAFVEAARATVPRKPVVVLKAGRTAAGAK 498 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G ++G +D +++AG+ AP + Sbjct: 499 AAGSHTGALAGDDAVYDD---ILRQAGVIRAPGLNEM 532 >gi|91793232|ref|YP_562883.1| GCN5-related N-acetyltransferase [Shewanella denitrificans OS217] gi|91715234|gb|ABE55160.1| GCN5-related N-acetyltransferase [Shewanella denitrificans OS217] Length = 899 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 52/307 (16%), Positives = 113/307 (36%), Gaps = 30/307 (9%) Query: 1 MSILVDKNTKVLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVP 57 M L + ++ + V G + +AG + + + + + PK + V Sbjct: 6 MQALFNPSS-IAVIGASANPERAGNLVMKNLLAGGFSGPIMPVSPK------YTAVMGVL 58 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR----- 112 + ++ + ++I S + + + + + G+ Sbjct: 59 AYPSI--MMLPIKPDLAIICTRASRVPELVETLAQFGCKTAIIMASGMAQESDETGQNLL 116 Query: 113 --VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 A ++ RL+GPN G+L P+ + + + G + LS+S + + Sbjct: 117 HLALAHAKRYGMRLLGPNSLGMLFPNIGLNASLTHTNAKLGKIAFLSQSSAICTTVLDWA 176 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + +G+G S + +G +F ++L+ D T +I++ + A E FL Sbjct: 177 NNKGIGFSAIISLG--DAADVDFDELLDYLGKDSQTSAIILYLD----AINEKRHFLSAA 230 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARI 289 R KPI+ +G++ A + +GG G + A + AG+ S + Sbjct: 231 RAASRNKPILVLKSGRSIEG----MQAAKLHTGGTQGNDAVYDAAFRRAGMLRVHSLVAL 286 Query: 290 GRSLVEL 296 ++ L Sbjct: 287 FAAVESL 293 >gi|320160964|ref|YP_004174188.1| putative acetyl-CoA synthetase [Anaerolinea thermophila UNI-1] gi|319994817|dbj|BAJ63588.1| putative acetyl-CoA synthetase [Anaerolinea thermophila UNI-1] Length = 701 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 86/226 (38%), Gaps = 15/226 (6%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI----PVLDMV--RVKARLEKSSSR 123 + +V V + + + I + I+ G P + + + K R Sbjct: 67 PVDLAVSVVASNLTPAVLEACGQRGIKAVTIISGGFREIGPEGEKLEKQCLEIAHKYGMR 126 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPNC G + S + KG +G LS+SG + V + +G S V + Sbjct: 127 LVGPNCVGTMDLYSGLNTTFIHGVPEKGHIGFLSQSGAICGGIVDYVRGKHIGFSNFVSL 186 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G + D++E D T I + E A ++ ++F+ + + KPIV Sbjct: 187 GNEA--DVTETDMIEYLADDPDTRVIALYVE----AIKDGSRFMGVCEQVAKSKPIVLLK 240 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 AGKT + + I+G + A K+ G+ + + Sbjct: 241 AGKTQAGAKAVSSHTGSIAGAITAYKT---AFKQCGVIEVDTVTDL 283 >gi|1122286|emb|CAA92426.1| succinyl coenzyme A synthetase [Homo sapiens] Length = 132 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 61/101 (60%), Positives = 73/101 (72%), Gaps = 5/101 (4%) Query: 3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 + VDKNTK++ QG TGK GTFH++QA+ Y T++VGG P KG G +PVF TV Sbjct: 37 LYVDKNTKIICQGFTGKQGTFHSQQALEY-GTKLVGGTTPGKGGQTHLG----LPVFNTV 91 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE 103 EAKE+T A ASVIYVPP A AI E+IEAEIPL+VCITE Sbjct: 92 KEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITE 132 >gi|212635205|ref|YP_002311730.1| GNAT family acetyltransferase [Shewanella piezotolerans WP3] gi|212556689|gb|ACJ29143.1| Acetyltransferase, GNAT family [Shewanella piezotolerans WP3] Length = 897 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 91/237 (38%), Gaps = 22/237 (9%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCIT---------EGIPVLDMVRVKARLEKS 120 + ++I S I + + + + +GI +L + ++ Sbjct: 69 KPDLAIICTAASKVPAIIETLAQFGCKVAIVMASGMADEFNKDGISLLHQMEQ--YADRY 126 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R++GPN G++ P+ + + G + +S+S + + + +G+G S+ Sbjct: 127 GMRILGPNSLGMILPNIGLNASLAHTSALPGKIAFVSQSAAICTTVLDWANNKGIGFSSF 186 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 + +G +F ++L+ D T++I++ + E FL R KPI+ Sbjct: 187 ISLG--DANDIDFDELLDYLGRDSKTDAIMLYIDSVN----EKRLFLSAARAASRNKPIL 240 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVEL 296 +G++ A + +GG G + A + AG+ + ++ L Sbjct: 241 VIKSGRSTEG----TSAAKLHTGGVAGNDAVYEAAFRRAGMLRVNDLIELFAAVETL 293 >gi|301059594|ref|ZP_07200506.1| CoA binding domain protein [delta proteobacterium NaphS2] gi|300446359|gb|EFK10212.1| CoA binding domain protein [delta proteobacterium NaphS2] Length = 493 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 59/285 (20%), Positives = 102/285 (35%), Gaps = 22/285 (7%) Query: 12 LVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAA 71 + G + + T+ + G I+P +N+ + +V + E Sbjct: 20 VFFGASNNVSSMGTQLLMTVQAGDFKGAIYPV---HLKEKRVLNLDAYRSVTDLPEVP-- 74 Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRLI 125 + +VI +P + + + I V ++ G + +K + +++ Sbjct: 75 DLAVIVLPTAVVNQTLEACGKKGIKQAVVVSGGFREMGEEGAILESVLKDIAAEYGMKIL 134 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 GPNC G+ P + G VG+ S+SG+ + S LG STA +G Sbjct: 135 GPNCLGVANPHQKINTTFVPNEGDPGFVGLSSQSGSFVTQMFEYLSGFNLGFSTAFSVGN 194 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF-VA 244 + V + +D + A T+ I + E F+K KPIV F V Sbjct: 195 EAV--LDIVDCMAYLGACPHTKVIALYIE----GIRRGDDFMKVARAIVPHKPIVAFYVG 248 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G A H GA+ E ++AGI A S + Sbjct: 249 GSKAGKAAGFSHTGAMAGPD----ELYDGMFRQAGIIRAASVEEM 289 >gi|311694111|gb|ADP96984.1| acetyltransferase, GNAT family [marine bacterium HP15] Length = 914 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 85/241 (35%), Gaps = 16/241 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD-------MVRVKA 115 +K + + ++I PP I EA + + +T G+ M V+ Sbjct: 63 KVSKMEFSPDLAIICTPPDTVAKTIKRLGEAGVRTAIVMTGGMSRTHSKTGQPLMYSVRE 122 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 ++ R++GPN G++ P G V + +SGT+ + G+ Sbjct: 123 AARETGIRVLGPNTIGLMVPARSLNATYAHMGAIPGRVAFVGQSGTIASSVIDWAFARGV 182 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S + +G + D+++ D T +I++ E A +F+ R Sbjct: 183 GFSYFLTLGDG--MDIDHDDLIDYLAQDTQTRAILLHIENI----PNARRFMSAVRVASR 236 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP++ +G+ + + ++ AG+ ++ +L Sbjct: 237 TKPVIAVKSGRVPESEWFPHDLPDGLKRSDPIYD---AMLQRAGVLRVDGLGQMFDALET 293 Query: 296 L 296 L Sbjct: 294 L 294 >gi|323700569|ref|ZP_08112481.1| CoA-binding domain protein [Desulfovibrio sp. ND132] gi|323460501|gb|EGB16366.1| CoA-binding domain protein [Desulfovibrio desulfuricans ND132] Length = 701 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 59/273 (21%), Positives = 98/273 (35%), Gaps = 25/273 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + T + ++PK G +PV T + + + +VI Sbjct: 26 GKVGHTVVTNMLSAGYTGKLLPVNPK------GGVIEGLPVITDIGDLPR--GLDLAVIS 77 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKARLEKSSSRLIGPNCPG 131 VPP +++ E + IT G +KA E+ L+GPNC G Sbjct: 78 VPPKAVIESVRRLGEIGTKSAIVITAGFKEASKEGYDLEQELKALCEEYRISLLGPNCLG 137 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ + + GS+ S+SG L + +G S V +G V Sbjct: 138 MINGAAGVNASFAAGLPGLGSIAFFSQSGALCVAILDWAMGANIGFSKFVSLGNKAV--L 195 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI-VGFVAGKTAPP 250 + D+L+ DEAT I+ E E FL++ + KP+ + A Sbjct: 196 DEADMLDYLNRDEATRVILGYIENV----EHGEAFLREARRASLNKPVIMIKAGTTAAGA 251 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 H GA+ G + A ++G+ Sbjct: 252 KAASSHTGAIA----GSDQSYTAAFHQSGVIRV 280 >gi|188584496|ref|YP_001927941.1| GCN5-related N-acetyltransferase [Methylobacterium populi BJ001] gi|179347994|gb|ACB83406.1| GCN5-related N-acetyltransferase [Methylobacterium populi BJ001] Length = 900 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 47/231 (20%), Positives = 87/231 (37%), Gaps = 14/231 (6%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIG 126 + ++ PP+ D + E+ V ++ + + +A + RLIG Sbjct: 69 PPDLVMVATPPAAVPDIVEEAGRIGAAAAVILSAHLGDGEAAPVGAAQAAARRHGLRLIG 128 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+ G+ P + + G + ++S+SGT+ + G+G S + +G Sbjct: 129 PDSIGLSVPARGLNATLLARPPKPGDLALISQSGTVASAIAEWGWRHGVGFSAVMTLGRS 188 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + D L+ F D T +I++ +A +FL R KP+V G+ Sbjct: 189 A--DVDIADCLDHFAEDYHTRAIILSLHHVA----DARKFLTAARAAARAKPVVVLRTGR 242 Query: 247 TAPPGRT-MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 PGR H GA+ G A + AG+ + ++ L Sbjct: 243 HEAPGRRPETHTGALARPGA----VYEAAFRRAGLLAVDGLDAMFSAVETL 289 >gi|308273328|emb|CBX29931.1| hypothetical protein N47_F16260 [uncultured Desulfobacterium sp.] Length = 899 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 111/293 (37%), Gaps = 21/293 (7%) Query: 13 VQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAAN 72 V G + K + + + G I+P S + + +VAE + + Sbjct: 19 VIGASEKKESVGFDIMRNLINGKFPGNIYPVNPSYKALWDKQS---YASVAEI--DSMVD 73 Query: 73 ASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV------KARLEKSSSRLIG 126 +V+ VP + A + E +++ + +V I+ G K E S R+IG Sbjct: 74 LAVVAVPIAVAPKIVNECVKSGVGGVVIISAGGKETGQKGKEIENAIKKEAESSGIRVIG 133 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PNC GI+ S G + G + +S+SG + + + +E +G S V +G Sbjct: 134 PNCLGIVCTKSNLNASFAGQMPIMGKMAFISQSGAICSSILDLSIKEQIGFSYFVSVGS- 192 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + +F D+++ D SIVM E + F+ R KPI+ +G+ Sbjct: 193 -MLDVDFGDMIDFIGQDPNVGSIVMYVENLTNLRY----FMSAARAVSRIKPIIALKSGR 247 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 T ++G + A K AGI + + ELL Sbjct: 248 TRAGAAAAASHTGALAGEDDIYD---AAFKRAGIVRVKTFEELFDC-AELLAK 296 >gi|157375215|ref|YP_001473815.1| GCN5-related N-acetyltransferase [Shewanella sediminis HAW-EB3] gi|157317589|gb|ABV36687.1| GCN5-related N-acetyltransferase [Shewanella sediminis HAW-EB3] Length = 896 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 103/286 (36%), Gaps = 26/286 (9%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +AG + + + + + PK + V + + + + ++I Sbjct: 26 RAGNVVMKNLLAGGFSGPIMPVTPK------YEAVLGVLAYPNIEALPLKP--DLAIICT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL-------EKSSSRLIGPNCPG 131 + + + + + G+ + L ++ R++GPN G Sbjct: 78 AAFRVPGVVETLAQFGCKVAIIMASGMASHFNDEGVSFLEEARLNAKRYGMRILGPNSLG 137 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P+ + + G + +S+S + + + +G+G S+ + +G Sbjct: 138 MMLPNLGLNASLAHASALPGKIAFVSQSAAICTTVLDWANNKGIGFSSFISLG--DATDI 195 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F ++L+ D T +I++ + E FL R KPI+ +G++ Sbjct: 196 DFDELLDYLGRDSRTNAIMLYVDSIN----EKRHFLSAARAASRNKPILVIKSGRSLEG- 250 Query: 252 RTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVEL 296 +A + +GG G + A + AG+ + ++ L Sbjct: 251 ---TNAAKLHTGGVTGNDAVYEAAFRRAGMLRVNDLIELFAAVETL 293 >gi|269104489|ref|ZP_06157185.1| protein acetyltransferase [Photobacterium damselae subsp. damselae CIP 102761] gi|268161129|gb|EEZ39626.1| protein acetyltransferase [Photobacterium damselae subsp. damselae CIP 102761] Length = 899 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 107/305 (35%), Gaps = 26/305 (8%) Query: 1 MSILVDKNTKVLVQ--GLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPV 58 +S L++ + ++ T + G + + + PK + Sbjct: 6 LSALLNPKSIAVIGASNQTHRTGFVIINNLLQSHFNGPIFPVTPK------YDSVAGILA 59 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD-------MV 111 + T+++ + +++ S I E E + V + G L Sbjct: 60 YPTISDLPR--TPDIAIVCTHASKTVKIIKELGEKGVKSAVILAAGTSTLKDETGTTVAD 117 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 ++ ++ RL+GPN GI+ P + KG++ +S+S + + Sbjct: 118 YLQQLAKRYQIRLLGPNSMGIILPWLNLNASFAPTPANKGNIAFISQSAAVCTTILDWAR 177 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + +G ST + +G F ++L+ D TE+I++ + A +FL Sbjct: 178 NKNIGFSTFISLGDG--LDINFAELLDALSQDGKTEAILLYLDSVN----NAREFLSAAR 231 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 R + I+ G+T + H G E A++ AG+ + + Sbjct: 232 AAARNRRILVVKGGRTLAGSEAVKHHTGSNLGADIVYE---AAIRRAGLLRVKNTHELFA 288 Query: 292 SLVEL 296 ++ L Sbjct: 289 AVETL 293 >gi|157382714|gb|ABV48795.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA26] gi|157382718|gb|ABV48797.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA29] gi|157382722|gb|ABV48799.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA36] gi|157382724|gb|ABV48800.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA37] gi|157382726|gb|ABV48801.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA39] gi|157382728|gb|ABV48802.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA40] Length = 348 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 52/121 (42%) Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + IGGD G++F+D + F + + +V++GE+GG E A+ +KD Sbjct: 1 CIAIGGDRFPGSDFLDHMLRFEKNPQVKMMVLLGEVGGELEYRVAEAIKDGRITKPVIAW 60 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 K GHAGA + A+ K A++EAG + S + + + Sbjct: 61 CIGTISKHFGGEVQFGHAGAKAGAERETADAKNEALREAGAYVPKSFNDLPELIRGVYEE 120 Query: 300 L 300 L Sbjct: 121 L 121 >gi|301061906|ref|ZP_07202636.1| CoA binding domain protein [delta proteobacterium NaphS2] gi|300444010|gb|EFK08045.1| CoA binding domain protein [delta proteobacterium NaphS2] Length = 458 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 109/294 (37%), Gaps = 24/294 (8%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ L D + V V G + + G + P G + F Sbjct: 1 MNSLFDPKS-VAVIGASDNPSKLGFHVMKSLVKGGYEGSLVPVNPGAERIFG---IKAFA 56 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD-------MVRV 113 +V+ + + +++ VP S + E A + IV IT G +D + Sbjct: 57 SVS--VSQVPIDLAIVVVPASLVAGVLKECAAARVKGIVLITAGFKEIDDPAGAVLHEEI 114 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--SIFRKGSVGILSRSGTLTYEAVFQTS 171 ++ +IGPN G++ + S+ G + ++S+SG +++ F Sbjct: 115 AEIANQAKIPVIGPNTFGMVNLRAKLNASFTPEFSMANPGDIALVSQSGGISHLLGFLAM 174 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +G+G S VG+G +F + + + D T +I + E ++ + L Sbjct: 175 GDGVGFSKIVGLGNR--LNVDFAQMADYLMDDPDTRAIALYVE----GIDDPGELLAAAK 228 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + KKPIV F +G + ++G +A K+AGI P Sbjct: 229 RHAGKKPIVAFKSGSGSVGDAAARSHTGTMAGRHEIYS---HAFKQAGILTVPR 279 >gi|158520155|ref|YP_001528025.1| CoA-binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158508981|gb|ABW65948.1| CoA-binding domain protein [Desulfococcus oleovorans Hxd3] Length = 492 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 87/242 (35%), Gaps = 17/242 (7%) Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------ 107 + F +V E + +VI +P + + + I + ++ G Sbjct: 59 QGLTAFDSVESLPEAP--DLAVIVLPTRIVCETMEACGKKGIRNAIVVSGGFKEVGPEGA 116 Query: 108 LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 + A K +IGPNC G+ + + G +G++S+SG+ + Sbjct: 117 EREKELAAIAGKYGISIIGPNCLGVTNAHARLNTTPHRYYGKPGFIGLVSQSGSFVTQMF 176 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 Q LG STA IG + T+ +D LE A T+ I + E A +F+ Sbjct: 177 AYLDQLHLGFSTAFSIGNEVN--TDLVDCLEFLGACPDTKVIALYVE----AIRRGRKFV 230 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 + K KPIV G + + +SG +++G+ S Sbjct: 231 ETARKIVPHKPIVALYVGGSETGRKAALSHTGSMSGPDDLYS---GIFRQSGVIRVSSIT 287 Query: 288 RI 289 + Sbjct: 288 EL 289 >gi|330466462|ref|YP_004404205.1| CoA-binding domain-containing protein [Verrucosispora maris AB-18-032] gi|328809433|gb|AEB43605.1| CoA-binding domain-containing protein [Verrucosispora maris AB-18-032] Length = 851 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 100/252 (39%), Gaps = 21/252 (8%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------L 108 +P + + A+ + +V+ VPP A + + ++ +A + +V I+ G Sbjct: 241 GLPAYPSAAD--AGLPVDLAVVAVPPESAPEVVADAAKAGVHGLVVISAGFAESGVEGAA 298 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + + R+IGPNC G+ D + + G VGI S+SG Sbjct: 299 AQRALVRAAHAAGMRVIGPNCLGVANTDPTVRLNATLAPRLPVPGRVGIFSQSGAFGVAL 358 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + + GLG S+ V G D+L+ + D AT+ I++ E G+ +F Sbjct: 359 LAEADRRGLGLSSFVSAGNRA--DVSGNDLLQYWQDDPATDVIMLYLETFGNP----RKF 412 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPP-----GRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 + + GR KP+V + P G A+ + D + + + G+ Sbjct: 413 ARLARRIGRDKPVVALASPARPPGVGDSVGPDEAAVSALFAQSGVIRVDTVAELLDVGVL 472 Query: 282 IAPSPARIGRSL 293 +A P G + Sbjct: 473 LANQPLPAGDRV 484 >gi|302557244|ref|ZP_07309586.1| acetyl coenzyme A synthetase (ADP forming) [Streptomyces griseoflavus Tu4000] gi|302474862|gb|EFL37955.1| acetyl coenzyme A synthetase (ADP forming) [Streptomyces griseoflavus Tu4000] Length = 715 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 97/276 (35%), Gaps = 21/276 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + + ++P+ + + +V + + +V Sbjct: 275 GKIGNSVMRNLVDGGFAGEIHPVNPR------ADDILGRKAYKSVTDVP--GEVDVAVFA 326 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEKSSSRLIGPNCPGIL 133 +P A+ E IP V I G + A E+ RL+GPN G Sbjct: 327 IPARFVASALEEVGRKRIPNAVLIPSGFAETGEHGLQEEIVAIAERHGVRLLGPNIYGYY 386 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 + KG V + S+SG + + G S VG+G + Sbjct: 387 STWQDLCATFCTPYDVKGPVALTSQSGGIGMAILGFARTTKTGVSAIVGLGNK--SDLDE 444 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 D+L F D TE I M E ++ F++ KKP+V AG+TA + Sbjct: 445 DDLLTWFGEDPHTECIAMHLEDL----KDGRAFVEAARATVPKKPVVVLKAGRTAAGAKA 500 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G ++G +D +++AG+ AP + Sbjct: 501 AGSHTGALAGDDAVYDD---ILRQAGVIRAPGLHDM 533 >gi|227358562|ref|ZP_03842887.1| acyl-CoA synthetase/acetyltransferase [Proteus mirabilis ATCC 29906] gi|227161273|gb|EEI46347.1| acyl-CoA synthetase/acetyltransferase [Proteus mirabilis ATCC 29906] Length = 886 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 100/280 (35%), Gaps = 25/280 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AGT + + V ++P + S + ++ + + + ++I Sbjct: 25 GRAGTTMMKNLLSGGFNGPVFPVNPTRNSVSGVFT------YPSIDKLPQVP--DLAIIC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + + ++ ++ ++ +K ++ RL+GPN G+L P Sbjct: 77 THHRRNLELLEQLGQSGCKAVIVLSA--QSEQFQAIKTLCQQYHIRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 +KG + +S+S + + +G S + +G + + D+L Sbjct: 135 GLNASFSPLPVKKGKLAFISQSAAVANTILDWAYYRNIGFSYFIALGDNQDIQVD--DLL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G+ Sbjct: 193 DFLARDSKTSAILLHLEHI----HDARRFMSASRSASRNKPILVIKSGR--------TQK 240 Query: 258 GAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 ++ G + A + AG+ + ++ L Sbjct: 241 AQLLLGDTPSYDVAYDAAFQRAGLLRVQDTHEMFSAVETL 280 >gi|197284298|ref|YP_002150170.1| acyl-CoA synthetase/acetyltransferase [Proteus mirabilis HI4320] gi|194681785|emb|CAR41007.1| putative acyl-CoA synthetase/acetyltransferase [Proteus mirabilis HI4320] Length = 886 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 100/280 (35%), Gaps = 25/280 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AGT + + V ++P + S + ++ + + + ++I Sbjct: 25 GRAGTTMMKNLLSGGFNGPVFPVNPTRNSVSGVFT------YPSIDKLPQVP--DLAIIC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + + ++ ++ ++ +K ++ RL+GPN G+L P Sbjct: 77 THHRRNLELLEQLGQSGCKAVIVLSA--QSEQFQAIKTLCQQYHIRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 +KG + +S+S + + +G S + +G + + D+L Sbjct: 135 GLNASFSPLPVKKGKLAFISQSAAVANTILDWAYYRNIGFSYFIALGDNQDIQVD--DLL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G+ Sbjct: 193 DFLARDSKTSAILLHLEHI----HDARRFMSASRSASRNKPILVIKSGR--------TQK 240 Query: 258 GAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 ++ G + A + AG+ + ++ L Sbjct: 241 AQLLLGDTPSYDVAYDAAFQRAGLLRVQDTHEMFSAVETL 280 >gi|194367674|ref|YP_002030284.1| GCN5-related N-acetyltransferase [Stenotrophomonas maltophilia R551-3] gi|194350478|gb|ACF53601.1| GCN5-related N-acetyltransferase [Stenotrophomonas maltophilia R551-3] Length = 906 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 105/290 (36%), Gaps = 26/290 (8%) Query: 17 TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE-RTAANASV 75 AG V I+P+ + + TV K+ + V Sbjct: 24 QRSAGRAVMRNLRGTGFPGKVAWINPR---------HAEIDGIRTVKRLKDLDWVPDLVV 74 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGPNCPGI 132 I P S + + E + + +T + P +V+A K R++GP+C G+ Sbjct: 75 ITAPASIVPQVVRTAAERGVQAAIILTAHLGDGPGSLSAQVEAVARKHGLRILGPHCLGV 134 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 + P + + + G + ++S S + V +G S V +G + Sbjct: 135 IAPHARLNASIAAHFPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLG--DTMDVD 192 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK--TAPP 250 F D+L+ F D T +I++ E ++A +F+ R KP+V +G+ P Sbjct: 193 FGDLLDYFATDYRTRAILLYVE----QIKDARKFMSAARAAARAKPVVVVKSGRAERVQP 248 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 G H A+ + A AG+ + + + E LG L Sbjct: 249 GSRDTHVQALARAD----DVYGAAFNRAGLLRVGALDEL-FTAAESLGRL 293 >gi|126174324|ref|YP_001050473.1| CoA-binding domain-containing protein [Shewanella baltica OS155] gi|125997529|gb|ABN61604.1| CoA-binding domain protein [Shewanella baltica OS155] Length = 905 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 107/301 (35%), Gaps = 29/301 (9%) Query: 7 KNTKVLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 K T V + G + +AG + + + + + PK + V + + Sbjct: 15 KPTSVAIIGASNTEKRAGNVLMKNLLSSGFSGPIMPVTPK------YRAVMGVLAYPNIE 68 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------VKAR 116 + + +VI + + + + + G+ Sbjct: 69 ALPIKP--DLAVICTRACRVPAIVETLAQFGCKVAIIMASGMAQEFNEDGVSLLDLTMQN 126 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ R++GPN G+L P + + G + +S+S + + + +G+G Sbjct: 127 AKRYGMRILGPNSLGMLLPPLGLNASLAHASALPGKIAFVSQSAAICTTVLDWANNKGIG 186 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+ + +G F ++L+ D T +I++ + E FL R Sbjct: 187 FSSFISLG--DATDINFDELLDYLGRDSRTSAIMLYIDSVN----EKRHFLSAARAASRN 240 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVE 295 KPI+ +G++A R A + +GG GG + A + AGI + ++ Sbjct: 241 KPILVIKSGRSAEGAR----AAKLHTGGVGGNDAVYEAAFRRAGILRVNDLIELFAAVES 296 Query: 296 L 296 L Sbjct: 297 L 297 >gi|21224882|ref|NP_630661.1| hypothetical protein SCO6582 [Streptomyces coelicolor A3(2)] gi|3288603|emb|CAA19775.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)] Length = 714 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 99/283 (34%), Gaps = 18/283 (6%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G +G+ G G IHP + + +V + Sbjct: 264 VAVIGASGEPGKIGNSVMRNLVDGGFAGEIHPVNPK---ADDILGRKAYKSVTDVP--GE 318 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----RVKARLEKSSSRLIG 126 + +V +P A+ E IP V I G + A E+ RL+G Sbjct: 319 VDVAVFAIPARFVAAALEEVGRKRIPNAVLIPSGFAETGEQALQDEIVAVAERHGVRLLG 378 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN G + KG V + S+SG + + G S VG+G Sbjct: 379 PNIYGYYSTWQDLCATFCTPYDVKGGVALTSQSGGIGMAILGFARTTKTGVSAIVGLGNK 438 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + D+L F D TE I M E ++ F++ +KP+V AG+ Sbjct: 439 --SDLDEDDLLTWFGEDPHTECIAMHLEDL----KDGRAFVEAARATVPRKPVVVLKAGR 492 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 TA + G ++G +D +++AG+ AP + Sbjct: 493 TAAGAKAAGSHTGALAGDDAVYDD---ILRQAGVIRAPGLNEM 532 >gi|146341824|ref|YP_001206872.1| hypothetical protein BRADO4953 [Bradyrhizobium sp. ORS278] gi|146194630|emb|CAL78655.1| conserved hypothetical protein with a putative CoA binding domain; putative succinyl-CoA (or acyl-CoA) synthetase [Bradyrhizobium sp. ORS278] Length = 713 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 102/276 (36%), Gaps = 21/276 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + I + IHPK + + +V + + +V Sbjct: 277 GKIGNSVMKNLINGGYKGQIYPIHPK------ASEILGYKAYKSVKDVP--GVIDTAVFA 328 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEKSSSRLIGPNCPGIL 133 +P A+ E E +IP V I G + + +K + RL+GPN G Sbjct: 329 IPAKFVAGALTECGEKQIPGAVLIPSGFAEANEPELQAEIVEIGKKYNVRLMGPNIYGFY 388 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 + + KG + S+SG + + + +G S VG+G + Sbjct: 389 YTPANLCATFCTAYDVKGHAALSSQSGGIGMAIIGFSRSAKMGVSAIVGLGNKSDIDED- 447 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 D+L F D T I E ++ F + + +KKP++ AG+T+ + Sbjct: 448 -DLLAFFEQDPNTNLIAQHCEDL----KDGRAFAEAAKRVSKKKPVIVLKAGRTSAGAKA 502 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 ++G ED +K++G+ A S ++ Sbjct: 503 ASSHTGALAGNDKIYEDV---LKQSGVIRARSLRQL 535 >gi|226362826|ref|YP_002780604.1| acyl-CoA synthetase [Rhodococcus opacus B4] gi|226241311|dbj|BAH51659.1| putative acyl-CoA synthetase [Rhodococcus opacus B4] Length = 690 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 108/279 (38%), Gaps = 26/279 (9%) Query: 27 QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA 86 QA+ T+ V ++ + G P +++E ER + VI VP G +A Sbjct: 37 QALRMKGTRAVHLVN--RRGERILGH----PSLKSLSELDER--VDLVVITVPAQGFEEA 88 Query: 87 IIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRLIGPNCPGILTPDSCKI 140 + +++ A IV +T G L RV AR+ ++ + L+GPNC G+L + Sbjct: 89 VDDALAAGATAIVGVTAGFAELGAAGKAVQDRVVARVREAGAVLLGPNCLGVLDSGTAL- 147 Query: 141 GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 + + G + +LS+SG + E G G S +G G D++ Sbjct: 148 -TLASNPLPAGRIALLSQSGNMALELSQFLEARGHGFSRFASLGNQADLGA--ADLIRSC 204 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGA 259 + + TE I + E G + KP++ G + R H G+ Sbjct: 205 VEHDDTELIAVYCEDFGDGRAFVDAAARASRAG---KPVLLLTVGGSEASIRGAQSHTGS 261 Query: 260 VISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + S A + AG+ SP ++ LLG Sbjct: 262 LTSDSAVI----DAACRAAGVYRVSSPRQLADVAATLLG 296 >gi|190576336|ref|YP_001974181.1| putative acyl-CoA synthetase [Stenotrophomonas maltophilia K279a] gi|190014258|emb|CAQ47905.1| putative acyl-CoA synthetase [Stenotrophomonas maltophilia K279a] Length = 908 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 105/290 (36%), Gaps = 26/290 (8%) Query: 17 TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE-RTAANASV 75 AG V I+P+ + + TV K+ + V Sbjct: 24 QRSAGRAVMRNLRGTGFPGKVAWINPR---------HAEIDGIRTVKRLKDLDWVPDLVV 74 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGPNCPGI 132 I P S + + E + + +T + P +V+A K R++GP+C G+ Sbjct: 75 ITAPASIVPQVVRTAAERGVQAAIILTAHLGEGPGSLSAQVEAVARKHGLRILGPHCLGV 134 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 + P + + + G + ++S S + V +G S V +G + Sbjct: 135 IAPHARLNASIAAHFPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLG--DTMDVD 192 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK--TAPP 250 F D+L+ F D T +I++ E ++A +F+ R KP+V +G+ P Sbjct: 193 FGDLLDYFATDYRTRAILLYVE----QIKDARKFMSAARAAARAKPVVVVKSGRAERVQP 248 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 G H A+ + A AG+ + + + E LG L Sbjct: 249 GSRDTHVQALARAD----DVYGAAFNRAGLLRVGALDEL-FTAAESLGRL 293 >gi|29828363|ref|NP_822997.1| acyl-CoA synthetase (NDP forming type) [Streptomyces avermitilis MA-4680] gi|29605466|dbj|BAC69532.1| putative acyl-CoA synthetase [Streptomyces avermitilis MA-4680] Length = 715 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 98/276 (35%), Gaps = 21/276 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G I + + ++PK V + +V + + ++ Sbjct: 275 GKIGNSVMRNLIDGGFSGEIHPVNPK------ADDIVGRKAYKSVTDIP--GEVDVALFA 326 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEKSSSRLIGPNCPGIL 133 +P + A+ E IP V I G V A E+ RL+GPN G Sbjct: 327 IPATFVAAALEEVGRKGIPNAVLIPSGFAETGEHELQDEVVAIAERHGVRLLGPNIYGYY 386 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 + KG V + S+SG + + G S VG+G + Sbjct: 387 STWHDLCATFCTPYDVKGGVALTSQSGGIGMAILGFARTTKTGVSAIVGLGNK--SDLDE 444 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 D+L F D TE I M E ++ F+ +KP+V AG+TA + Sbjct: 445 DDLLTWFGEDPHTECIAMHLEDL----KDGRAFVAAARATVPRKPVVVLKAGRTAAGAKA 500 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G ++G +D +K+AG+ AP + Sbjct: 501 AGSHTGALAGDDAVYDD---ILKQAGVIRAPGLNDM 533 >gi|220919960|ref|YP_002495263.1| CoA-binding domain protein [Methylobacterium nodulans ORS 2060] gi|219952380|gb|ACL62771.1| CoA-binding domain protein [Methylobacterium nodulans ORS 2060] Length = 722 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 108/296 (36%), Gaps = 25/296 (8%) Query: 1 MSILVDKNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVP 57 M+ ++ T V V G + GK G + I + IHPK + + Sbjct: 267 MNRIMRPET-VAVIGASAEDGKIGNSVMKNLISGGYKGTIYPIHPK------ADTILGLK 319 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + +V + + +V +P A+ E E + V I G + + Sbjct: 320 AYRSVRDVP--GPIDVAVFAIPAQFVAAALTECGEKGVAGAVLIPSGFAETGNEAGQQEI 377 Query: 118 ----EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + + RL+GPN G +G + S+SG + + + Sbjct: 378 QEIGRRYNIRLMGPNIYGFYYMAKNLCATFCTPFDVQGQAALSSQSGGIGMAIIGFSRST 437 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G S VG+G + D+L F D++T+ I E ++ F + + Sbjct: 438 KMGVSAIVGLGNKSDIDED--DLLAFFEQDDSTKVIAQHCEDL----KDGRSFAEVARRV 491 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +KKP++ AG+T+ + ++G ED K+ G+ A S ++ Sbjct: 492 SKKKPVIVLKAGRTSAGAKAASSHTGALAGNDKIYEDV---FKQCGVIRARSLRQL 544 >gi|256783952|ref|ZP_05522383.1| hypothetical protein SlivT_05646 [Streptomyces lividans TK24] Length = 714 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 99/283 (34%), Gaps = 18/283 (6%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G +G+ G G IHP + + +V + Sbjct: 264 VAVIGASGEPGKIGNSVMRNLVDGGFAGEIHPVNPK---ADDILGRKAYKSVTDVP--GE 318 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----RVKARLEKSSSRLIG 126 + +V +P A+ E IP V I G + A E+ RL+G Sbjct: 319 VDVAVFAIPARFVAAALEEVGRKRIPNAVLIPSGFAETGEQALQDEIVAVAERHGVRLLG 378 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN G + KG V + S+SG + + G S VG+G Sbjct: 379 PNIYGYYSTWQDLCATFCTPYDVKGGVALTSQSGGIGMAILGFARTTKTGVSAIVGLGNK 438 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + D+L F D TE I M E ++ F++ +KP+V AG+ Sbjct: 439 --SDLDEDDLLTWFGEDPHTECIAMHLEDL----KDGRAFVEAARATVPRKPVVVLKAGR 492 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 TA + G ++G +D +++AG+ AP + Sbjct: 493 TAAGAKAAGSHTGALAGDDAVYDD---ILRQAGVIRAPGLNEM 532 >gi|299133571|ref|ZP_07026765.1| CoA-binding domain protein [Afipia sp. 1NLS2] gi|298591407|gb|EFI51608.1| CoA-binding domain protein [Afipia sp. 1NLS2] Length = 710 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 101/276 (36%), Gaps = 21/276 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + I + +HPK + + +V + + +V Sbjct: 273 GKIGNSVMKNLINGGYKGNIYPVHPK------AADILGHKAYKSVKDIP--GEVDVAVFA 324 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEKSSSRLIGPNCPGIL 133 +P A+ E E +IP V I G + + ++ RL+GPN G Sbjct: 325 IPAKFVAGALKECGEKKIPGAVLIPSGFAEANEPELQEEIVKIGKQYDIRLMGPNIYGFY 384 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 + + KGS + S+SG + + + +G S VG+G + Sbjct: 385 YTPANLCATFCTAFDVKGSAALSSQSGGIGMAIIGFSRSAKMGVSAIVGLGNKSDIDED- 443 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 D+L F D+ T I M E ++ F + +KKP++ G+T+ + Sbjct: 444 -DLLAFFEQDKNTNVIAMHCEDL----KDGRAFANAARRVSKKKPVIVLKGGRTSAGAKA 498 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 ++G ED K+AG+ A S ++ Sbjct: 499 AASHTGALAGNDKIYEDV---FKQAGVIRARSLRQL 531 >gi|289767834|ref|ZP_06527212.1| acyl-CoA synthetase [Streptomyces lividans TK24] gi|289698033|gb|EFD65462.1| acyl-CoA synthetase [Streptomyces lividans TK24] Length = 715 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 99/283 (34%), Gaps = 18/283 (6%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G +G+ G G IHP + + +V + Sbjct: 265 VAVIGASGEPGKIGNSVMRNLVDGGFAGEIHPVNPK---ADDILGRKAYKSVTDVP--GE 319 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----RVKARLEKSSSRLIG 126 + +V +P A+ E IP V I G + A E+ RL+G Sbjct: 320 VDVAVFAIPARFVAAALEEVGRKRIPNAVLIPSGFAETGEQALQDEIVAVAERHGVRLLG 379 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN G + KG V + S+SG + + G S VG+G Sbjct: 380 PNIYGYYSTWQDLCATFCTPYDVKGGVALTSQSGGIGMAILGFARTTKTGVSAIVGLGNK 439 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + D+L F D TE I M E ++ F++ +KP+V AG+ Sbjct: 440 --SDLDEDDLLTWFGEDPHTECIAMHLEDL----KDGRAFVEAARATVPRKPVVVLKAGR 493 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 TA + G ++G +D +++AG+ AP + Sbjct: 494 TAAGAKAAGSHTGALAGDDAVYDD---ILRQAGVIRAPGLNEM 533 >gi|118575233|ref|YP_874976.1| acyl-CoA synthetase (NDP forming) [Cenarchaeum symbiosum A] gi|118193754|gb|ABK76672.1| acyl-CoA synthetase (NDP forming) [Cenarchaeum symbiosum A] Length = 701 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 58/286 (20%), Positives = 108/286 (37%), Gaps = 23/286 (8%) Query: 13 VQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAAN 72 V G + K G+ G ++P + G F TV + + Sbjct: 14 VIGASDKEGSV-GRTITSNIMKGFTGTVYPISPTRQEVFGKKA---FKTVLDVP--GNID 67 Query: 73 ASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRLIG 126 +VI + + + E + I + IT G + +++ K + +IG Sbjct: 68 LAVIVIKNTFVPAVLEECGKKGIRGAIVITAGFKEVGKEGAILEGQLRDIAAKHNMGIIG 127 Query: 127 PNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 PNC G++ P + + G + ++S+SG + S +G+G S + +G Sbjct: 128 PNCLGVMNLDPKTMMNATFLKITPKTGHIALVSQSGAICAALCEDASAQGIGFSAIISMG 187 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 I+VL++ E T IVM E G +E + R KKPI+ + Sbjct: 188 NKAA--MTEIEVLKMLADHEQTRVIVMYLEDMGDGQEFLR--VARHITRELKKPILVLKS 243 Query: 245 GKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G++ + M H GA++ G E ++++G + + Sbjct: 244 GRSPEGAKAAMSHTGALM----GSDEIYDALLRQSGAIRVDTMEEL 285 >gi|284164917|ref|YP_003403196.1| CoA-binding protein [Haloterrigena turkmenica DSM 5511] gi|284014572|gb|ADB60523.1| CoA-binding domain protein [Haloterrigena turkmenica DSM 5511] Length = 709 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 62/304 (20%), Positives = 114/304 (37%), Gaps = 29/304 (9%) Query: 4 LVDKNTKVLVQGLTGKAGTF---HTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 L D T V V G T + G T +VV I+P + + + ++ Sbjct: 7 LFDPET-VAVVGATDREGAVGRAITANLRDRFDGEVV-PINPGR------DEVLGLECYS 58 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL------DMVRVK 114 V+ + +V+ VPP DA+ + EA +V IT G R++ Sbjct: 59 DVSS---APPIDLAVVVVPPDAVIDALNDLGEAGTRNVVVITAGFSETGGEGADRERRLR 115 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 E+ ++GPN G++ S +GS+ +S+SG + +++ Sbjct: 116 EVAEEYDLNVVGPNSLGVMATPSGMNATFGPEHALEGSISFMSQSGAFITAVLDWANEQE 175 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G V +G V D + + D T+ I+ E ++ +F++ + Sbjct: 176 IGFQDVVSLGNKAVLDET--DFVREWGDDPDTDVIIGYLEDI----DDGQEFIEAAREVT 229 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 PIV +G+T + I+G + E +++AG+ A S + Sbjct: 230 DDTPIVLVKSGRTDAGAQAASSHTGAIAGSERAYE---AGLEQAGVLRARSVQELFDYAR 286 Query: 295 ELLG 298 L G Sbjct: 287 ALAG 290 >gi|226306290|ref|YP_002766250.1| acetate--CoA ligase [Rhodococcus erythropolis PR4] gi|226185407|dbj|BAH33511.1| putative acetate--CoA ligase [Rhodococcus erythropolis PR4] Length = 901 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 104/263 (39%), Gaps = 27/263 (10%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P G V + TV + + + +V+ VP + + ++ + Sbjct: 250 FTGPVYPVNAEHRSVHG---VRAYPTVRDIPD--DVDLAVVAVPAESINSVLDDCLDKGV 304 Query: 96 PLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSI 147 +V ++ G ++ RLIGPN G+ P + + Sbjct: 305 KALVVVSSGFSESGPDGRSSERKLVHAARAHGMRLIGPNALGVANNDPSISLNATLAPVL 364 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 G+VG +SG L + + ++ +G S V G D+L+ + +D++TE Sbjct: 365 PVAGNVGFFCQSGALGIAILDEAARSRIGLSAFVSAGNRA--DVSGNDLLQYWDSDQSTE 422 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 +++ E G+ +F + + RKKPIV +G+ A P + + G Sbjct: 423 VVLLYLESFGNP----RKFSRIARRVARKKPIVAVKSGRHAVPPV-------LAATGVEI 471 Query: 268 AEDKINA-MKEAGICIAPSPARI 289 + + A ++AG+ S +++ Sbjct: 472 DDSIVRALFEQAGVIQVGSISQL 494 >gi|256830195|ref|YP_003158923.1| CoA-binding domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256579371|gb|ACU90507.1| CoA-binding domain protein [Desulfomicrobium baculatum DSM 4028] Length = 697 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 87/231 (37%), Gaps = 15/231 (6%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSR 123 + +V+ + P +A+ + + + ++ + G + + E+ + Sbjct: 63 GVDLAVVCLAPEFVLEALEQVADMGVKAVIITSAGFREIGGQGYYLEESIIQLAERRNLT 122 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPNC G+ + + + +G++ S SG++ + + E +G S + Sbjct: 123 LLGPNCLGVASWADHLNASLIARLPSQGNIAFFSPSGSMCNAILDWAASEEIGFSKFASL 182 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G V + +L+ D T I+ E +F + +KP++ Sbjct: 183 GNRAVI--DEASMLQFLAEDPQTSVIIGYLE----GMNNGRRFARISQTITHEKPVIMLQ 236 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 AG T + + ++G + + A+K+AGI + + + Sbjct: 237 AGMTEHGQKAISSHVGALTGSERAYQT---ALKQAGIIQVDNLSSLFDLAR 284 >gi|218778995|ref|YP_002430313.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760379|gb|ACL02845.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 486 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 67/295 (22%), Positives = 109/295 (36%), Gaps = 32/295 (10%) Query: 11 VLVQGLT--GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKER 68 G+T G F + Y G I+P + G + VP + + Sbjct: 19 AFYGGVTKFGSFANFVMLSIMKYG---YAGKIYP---ISDKGGDVLGVPAIAGLEQ--AD 70 Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK------SSS 122 + + I VP + + + ++ + + T G + A ++ Sbjct: 71 GPVDLASISVPAKAVPEILEQCLQNGVAGVQVHTSGFAEMGDEEGIALQKQLEEYAAKGL 130 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIF--RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R++GPNC GI P ++PG F + GS ++S+SG L + + + GLG S Sbjct: 131 RIVGPNCFGIHCPKGGLT-VLPGFDFNKQPGSCSMISQSGGLANDFGHEAALAGLGISKV 189 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 V G + I ++E D TE I E +A FL K KKP++ Sbjct: 190 VSFGNG--CDLDAIALMEYLADDPQTEYIAAYIE----GVADAGAFLDVVRKTAAKKPVI 243 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN--AMKEAGICIAPSPARIGRSL 293 + G T GR + G G E KI A+ +AG + +L Sbjct: 244 IWKGGLTPLGGR-----ATLSHTGSMGGESKIWEGALAQAGAYAVQGLDEMMDTL 293 >gi|318081425|ref|ZP_07988757.1| putative acyl-CoA synthetase [Streptomyces sp. SA3_actF] Length = 657 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 92/250 (36%), Gaps = 20/250 (8%) Query: 51 GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV--- 107 G VP F TV E E + +V+ VP +A+ E E + +V I+ G Sbjct: 285 GTLDGVPAFRTVKEIGE--DVDLAVVVVPAERVPEAVAECGEHGVRGLVVISAGYGESVT 342 Query: 108 ---LDMVRVKARLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTL 162 R+ + RL+GPN G++ D + + +G VG+ ++SG + Sbjct: 343 AGRARQRRLVRQARSYGMRLVGPNAFGLVNTDPAVRLNASLAPELAPRGRVGLFTQSGAI 402 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 + + Q G G ST V G DVL+ + D T+ +M E G+ Sbjct: 403 GIALLSELHQRGTGLSTFVSAGNRA--DVSGNDVLQYWYDDPDTDVALMYLESIGNP--- 457 Query: 223 AAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +F + + KP+V + HA A + +AG+ Sbjct: 458 -RKFTRLARRAAATKPLVVVQGARH-SAATPPSHAVAETRLPHATVSALLA---QAGVIR 512 Query: 283 APSPARIGRS 292 + + + Sbjct: 513 VETVTDLVDT 522 >gi|159111022|ref|XP_001705744.1| Acetyl-CoA synthetase [Giardia lamblia ATCC 50803] gi|5514636|gb|AAD44021.1|AF107206_1 acetyl-CoA synthetase [Giardia intestinalis] gi|157433833|gb|EDO78070.1| Acetyl-CoA synthetase [Giardia lamblia ATCC 50803] Length = 726 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 111/288 (38%), Gaps = 22/288 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + AG ++ G ++P + + + +V + + + Sbjct: 24 VAVIGASPNAGKVGNTVVTNIKESGYTGKVYPINPTAT---EILGYKTYKSVLDVPD--S 78 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRL 124 + ++ +P A E + ++ +V IT G + + + RL Sbjct: 79 IDVVIVVIPSKAVLAAAKECAQKKVKSLVVITAGFKEIGGEGVQMEQDLTKICKDAGIRL 138 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPNC GI+TP+ + KGS+ LS+SG + + G+G S + +G Sbjct: 139 VGPNCLGIVTPN--LNCTFASAKPSKGSIAFLSQSGAMLTSILDWALTNGIGFSNFISLG 196 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + +D++ D T+ I++ E + + +FL+ KKP++ + Sbjct: 197 NKA--DVDEVDLIMEVAEDPNTDIILLYLE----SIVDGRKFLEQIPTCVHKKPVIILKS 250 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 G +A ++G + A ++AG+ A + + + Sbjct: 251 GTSAAGAAAASSHTGALAGNDIAFDL---AFEKAGVLRAATMSDLFDL 295 >gi|308161477|gb|EFO63922.1| Acetyl-CoA synthetase [Giardia lamblia P15] Length = 715 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 111/288 (38%), Gaps = 22/288 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + AG ++ G ++P + + + +V + + + Sbjct: 13 VAVIGASPNAGKVGNTVVTNIKESGYTGKVYPINPTAT---EILGYKTYKSVLDVPD--S 67 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRL 124 + ++ +P A E + ++ +V IT G + + + RL Sbjct: 68 IDVVIVVIPSKAVLAAAKECAQKKVKSLVVITAGFKEVGGEGVQMEQDLTKICKDAGIRL 127 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPNC GI+TP+ + KGS+ LS+SG + + G+G S + +G Sbjct: 128 VGPNCLGIVTPN--LNCTFASAKPSKGSIAFLSQSGAMLTSILDWALTNGIGFSNFISLG 185 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + +D++ D T+ I++ E + + +FL+ KKP++ + Sbjct: 186 NKA--DVDEVDLIMEVAEDPNTDIILLYLE----SIVDGRKFLEQIPTCVHKKPVIILKS 239 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 G +A ++G + A ++AG+ A + + + Sbjct: 240 GTSAAGAAAASSHTGALAGNDIAFDL---AFEKAGVLRAATMSDLFDL 284 >gi|20091986|ref|NP_618061.1| acetate-CoA ligase (ADP-forming), subunit alpha [Methanosarcina acetivorans C2A] gi|19917192|gb|AAM06541.1| acetate-CoA ligase (ADP-forming), subunit alpha [Methanosarcina acetivorans C2A] Length = 468 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 54/230 (23%), Positives = 92/230 (40%), Gaps = 20/230 (8%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSR 123 + ++ VP + + S+E I V ++ G + K A L++ R Sbjct: 80 RIDIAIFAVPAKAVLEILKGSVEN-IKGAVIVSSGFREMGAGGKKMEEELRALLKEKGIR 138 Query: 124 LIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +GPNC GI D+ I +G + +L++SG+ + + + EG G + Sbjct: 139 AMGPNCLGIYDTISKVDTFFIEGEKIERPARGGISVLTQSGSFAAVIMDELANEGAGVAR 198 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V G + D L+ DEAT+++ + E G + +FL+ + +KKP+ Sbjct: 199 VVSYGNK--VDLDESDCLDFLAQDEATKAVALYIESVG----DGRRFLEAASNCVKKKPV 252 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 V GK P R ISG E A ++ GI S + Sbjct: 253 VALKVGKREPGARAASSHTGAISGRYEAYE---AAFRKTGIIEVASYEEL 299 >gi|317152576|ref|YP_004120624.1| CoA-binding domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316942827|gb|ADU61878.1| CoA-binding domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 706 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 98/279 (35%), Gaps = 25/279 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G I + ++P KG T + V +A+ + +V+ Sbjct: 26 GKIGHTVMTNMIGAGFRGKLFPVNP-KGGTIEG-----MAVVRDIADLPR--GLDLAVLA 77 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKARLEKSSSRLIGPNCPG 131 VP +I + ++ IT G + +KA E S ++GPNC G Sbjct: 78 VPRDHVEPSIQALAGIGVKSVIVITAGFKEVGKDGYRLEQELKALCEAHSIAMLGPNCLG 137 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P + GS+ S+SG L + E +G S + +G V Sbjct: 138 MMNPAHGVNASFAAGQPKAGSIAFFSQSGALCVAILDWALGENIGFSKFISLGNKAVI-- 195 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI-VGFVAGKTAPP 250 + D+L D T+ I+ E E FL+ R KP+ + A Sbjct: 196 DEADMLGYLGGDAQTKVILGYIENV----EHGEAFLRQARAVCRNKPVIMIKAGTTAAGA 251 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 H GA+ G + A +++G+ A + Sbjct: 252 KAASSHTGAIA----GSDQTYTAAFRQSGVIRVADVASL 286 >gi|209885673|ref|YP_002289530.1| CoA-binding [Oligotropha carboxidovorans OM5] gi|209873869|gb|ACI93665.1| CoA-binding [Oligotropha carboxidovorans OM5] Length = 710 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 102/276 (36%), Gaps = 21/276 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + I + +HPK + + +V + + +V Sbjct: 273 GKIGNSVMKNLINGGYKGQIYPVHPK------AADILGHKAYKSVKDIP--GDVDVAVFA 324 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEKSSSRLIGPNCPGIL 133 +P A+ E E +IP V I G + + +K RL+GPN G Sbjct: 325 IPAKFVAGALTECGEKKIPGAVLIPSGFAEANEPELQEEIVKIGKKYDIRLMGPNIYGFY 384 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 + + KGS + S+SG + + + +G S VG+G + Sbjct: 385 YTPANLCATFCTAFDVKGSAALSSQSGGIGMAIIGFSRSAKMGVSAIVGLGNKSDIDED- 443 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 D+L F D+ T I M E ++ F + + +KKP++ G+T+ + Sbjct: 444 -DLLAFFEQDKNTNVIAMHCEDL----KDGRAFAEAARRVSKKKPVIVLKGGRTSAGAKA 498 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 ++G ED K++G+ A S ++ Sbjct: 499 AASHTGALAGNDKIYEDV---FKQSGVIRARSLRQL 531 >gi|304408813|ref|ZP_07390434.1| CoA-binding domain protein [Shewanella baltica OS183] gi|307302816|ref|ZP_07582571.1| CoA-binding domain protein [Shewanella baltica BA175] gi|304352634|gb|EFM17031.1| CoA-binding domain protein [Shewanella baltica OS183] gi|306913176|gb|EFN43598.1| CoA-binding domain protein [Shewanella baltica BA175] Length = 901 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 107/301 (35%), Gaps = 29/301 (9%) Query: 7 KNTKVLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 K T V + G + +AG + + + + + PK G + P ++ Sbjct: 11 KPTSVAIIGASNTEKRAGNVLMKNLLSSGFSGPIMPVTPK---YRAVMGVLAYPNIESLP 67 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------VKAR 116 + +VI + + + + + G+ Sbjct: 68 I-----KPDLAVICTRACRVPAIVETLAQFGCKVAIIMASGMAQEFNEDGVSLLDLTMQN 122 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ R++GPN G+L P + + G + +S+S + + + +G+G Sbjct: 123 AKRYGMRILGPNSLGMLLPPLGLNASLAHASALPGKIAFVSQSAAICTTVLDWANNKGIG 182 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+ + +G F ++L+ D T +I++ + E FL R Sbjct: 183 FSSFISLG--DATDINFDELLDYLGRDSRTSAIMLYIDSVN----EKRHFLSAARAASRN 236 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVE 295 KPI+ +G++A R A + +GG GG + A + AG+ + ++ Sbjct: 237 KPILVIKSGRSAEGAR----AAKLHTGGVGGNDAVYEAAFRRAGMLRVNDLIELFAAVES 292 Query: 296 L 296 L Sbjct: 293 L 293 >gi|261342110|ref|ZP_05969968.1| protein FdrA [Enterobacter cancerogenus ATCC 35316] gi|288315441|gb|EFC54379.1| protein FdrA [Enterobacter cancerogenus ATCC 35316] Length = 513 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK AN +VI V + A +++E ++ ++ ++ + + D + +K Sbjct: 99 YATIASAKAHRPDANLAVISVNGTFAAREARQALENDLN-VMLFSDNVSLDDELALKQLA 157 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + G+ + +GS+GI+ SGT + E + + G G Sbjct: 158 HQKGLLMMGPDCGTAIINGA---GLCFANAVCRGSIGIVGASGTGSQELSVRIHEFGGGV 214 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + ADE T++IV++ + A E R Sbjct: 215 SQLIGTGGRDLSEKIGGLMMLDAIAMLEADENTQAIVLISKPPAPAVAEKVL----ARAR 270 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP++ G+ APP G + +G E + A+ GI Sbjct: 271 ACRKPVIACFLGRNAPPADEDG-----LQFARGTKEAALKAVLLTGIK 313 >gi|197103925|ref|YP_002129302.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein [Phenylobacterium zucineum HLK1] gi|196477345|gb|ACG76873.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein [Phenylobacterium zucineum HLK1] Length = 889 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 89/279 (31%), Gaps = 25/279 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G G + ++PK G F +VA+ A + +VI Sbjct: 25 GSVGDVVARNLKAGGFPGPLMFVNPK--GKTILGETA----FRSVADLP--HAPDLAVIA 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPG 131 P + + V I+ G D + R++GPNC G Sbjct: 77 TPAPTLPGLVSDLGARGCRAAVVISAGFEAQDEATARLRQALLDAARPHLLRIVGPNCLG 136 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++P G V ++++SG + + G+G S V +G Sbjct: 137 FMSPRRGINASFARGSAPPGGVALVAQSGAVASALLDWAPAHGVGFSHVVTLGNA--LDV 194 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF-VAGKTAPP 250 + D+L+ D T++I++ E EA +F+ R KP+V A Sbjct: 195 DVADMLDHLGRDPETKAILLYLE----GLREARKFMSAARFAARSKPVVVIKGGRGAAGA 250 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 H GA+ A + AG+ + Sbjct: 251 KAAFSHTGALAGADAVYAAA----FRRAGLLQVAELSDF 285 >gi|87118828|ref|ZP_01074727.1| predicted Acetyl-CoA synthetase [Marinomonas sp. MED121] gi|86166462|gb|EAQ67728.1| predicted Acetyl-CoA synthetase [Marinomonas sp. MED121] Length = 727 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 95/239 (39%), Gaps = 21/239 (8%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK---- 114 + +VA + ++I P I + ++ + + G +D K Sbjct: 74 YASVA--MMPPHVDMALICTPAKTIPSLIEQCGAMKVKGAIILASGFGEVDEAGAKLEQD 131 Query: 115 --ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 +++ R+IGPN G+ K+ ++ + G VGI+S+SG + + Sbjct: 132 VLDAAKQAGVRIIGPNTSGLFNLHK-KVNLLALDNVKPGDVGIISQSGNMLLSLALEAQS 190 Query: 173 EG-LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 G +G ST VG G F D L D+ T E ++ FL + Sbjct: 191 NGHIGFSTYVGPGNQ--TDVGFADYLAYLGDDQNTGVATFYVEGF----KDGRAFLDEAR 244 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMG-HAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 K +KKP+V + +G T + H GA+ G + ++ +++AG+ + + I Sbjct: 245 KTSQKKPVVVYKSGSTEAGQKAASSHTGALA----GSYQMTVDLLEQAGVSVVANSDEI 299 >gi|297562237|ref|YP_003681211.1| CoA-binding protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846685|gb|ADH68705.1| CoA-binding domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 976 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 103/265 (38%), Gaps = 23/265 (8%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 + G ++P V V + +V + ++ + +V+ V D + + + Sbjct: 292 GGEFQGPVYPVHPEAK---AVVGVRAYPSVLDIPDQ--VDLAVVAVRADMVVDVVEQCAD 346 Query: 93 AEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMP 144 + +V ++ G + + R++GPNC GI P+ + Sbjct: 347 KGVHGLVVVSSGFGETGPEGRARQDELVRTARAAGMRVVGPNCLGIANTDPEISLNATLS 406 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 + G++G S+SG L + + ++ G+G ST V G D+++ + D Sbjct: 407 PDLPPSGTIGFFSQSGALGRAILQRVAERGMGLSTFVSAGNRA--DVSGNDLMQYWQEDP 464 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 ATE ++ E G+ +F + + ++KP+V +G +A T AG + Sbjct: 465 ATEVVLQYLESLGNP----RKFTRLARRLAKQKPVVAVRSGGSARTTPTGHAAGGLSLPD 520 Query: 265 KGGAEDKINAMKEAGICIAPSPARI 289 + ++AG+ ++ Sbjct: 521 ----YAVTSLFQQAGVVRVDDITQM 541 >gi|302555344|ref|ZP_07307686.1| acyl-CoA synthetase [Streptomyces viridochromogenes DSM 40736] gi|302472962|gb|EFL36055.1| acyl-CoA synthetase [Streptomyces viridochromogenes DSM 40736] Length = 582 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 97/277 (35%), Gaps = 21/277 (7%) Query: 17 TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVI 76 GK G + + ++PK + + +V + + +V Sbjct: 274 QGKIGNSVMRNLVDGGFAGDIHPVNPK------ADDILGRKAYRSVTDVP--GEVDVAVF 325 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEKSSSRLIGPNCPGI 132 +P A+ E +IP V I G + E+ RL+GPN G Sbjct: 326 AIPARFVASALEEVGRKKIPNAVLIPSGFAETGEHELQAEIVTIAERHGVRLLGPNIYGY 385 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 + KG V + S+SG + + G S VG+G + Sbjct: 386 YSTWQDLCATFCTPYDVKGGVALTSQSGGIGMAILGFARTTRTGVSAIVGLGNK--SDLD 443 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 D+L F D T+ I M E ++ F++ KKP+V AG+TA + Sbjct: 444 EDDLLTWFGEDPNTQCIAMHLEDL----KDGRAFVEAARATVPKKPVVVLKAGRTAAGAK 499 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G ++G +D +++AG+ AP + Sbjct: 500 AAGSHTGALAGDDAVYDD---ILRQAGVIRAPGLNDM 533 >gi|298252223|ref|ZP_06976026.1| CoA-binding domain protein [Ktedonobacter racemifer DSM 44963] gi|297546815|gb|EFH80683.1| CoA-binding domain protein [Ktedonobacter racemifer DSM 44963] Length = 486 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 89/244 (36%), Gaps = 15/244 (6%) Query: 52 GNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD-- 109 + P + ++ + + +VI +I + I + IV IT G Sbjct: 55 EILGRPTYPSLRDVP--GQVDLAVIATSFPHVPGSIEDCIAKGVKGIVLITAGFSETGPE 112 Query: 110 ----MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 + AR + R+IG NC G+ S + +G +G++S+SG L Sbjct: 113 GRALEQDLVARCREHGIRIIGSNCMGLYVRRSKLNALGMVFPLPEGPIGLVSQSGNLGMY 172 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 Q +G G +T + +G F + ++ D T V+ G + EE Q Sbjct: 173 FYAQAHLDGCGFTTFLSVGNS--VDVSFPECMQYLADDPET--SVIAGYVESIEEETLRQ 228 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 +D RG KP V ++G T R + + ++ + A +G+ Sbjct: 229 VTRDMHARGHYKPAVILLSGATEVGVRASLAHTGSQARVRPDSDTGLFA---SGVVRVLR 285 Query: 286 PARI 289 + Sbjct: 286 SDEL 289 >gi|157382712|gb|ABV48794.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA25] Length = 348 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 52/121 (42%) Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + IGGD G++F+D + + + + +V++GE+GG E A+ +KD Sbjct: 1 CIAIGGDRFPGSDFLDHMLRYEKNPQVKMMVLLGEVGGELEYRVAEAIKDGRITKPVIAW 60 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 K GHAGA + A+ K A++EAG + S + + + Sbjct: 61 CIGTISKHFGGEVQFGHAGAKAGAERETADAKNEALREAGAYVPKSFNDLPELIRGVYEE 120 Query: 300 L 300 L Sbjct: 121 L 121 >gi|320161060|ref|YP_004174284.1| acetyl-CoA synthetase [Anaerolinea thermophila UNI-1] gi|319994913|dbj|BAJ63684.1| acetyl-CoA synthetase [Anaerolinea thermophila UNI-1] Length = 703 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 102/276 (36%), Gaps = 23/276 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G I + I+P + + + +V + E +A+VI Sbjct: 25 GKIGYTVLSNLINQGYKGKIFPINPG------AEEILGLKAYPSVLDVPE--DIDAAVIT 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV----KARLEKSSSRLIGPNCPGIL 133 +P A+ E + + +V IT G + + + + + R++GPN G+L Sbjct: 77 IPAKIVIPAVEECGKKGVKGLVIITSGFSEVGKRELEEELVQKAHEYNMRILGPNIVGVL 136 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 S + G ++S+SG L T G+G + IG + +F Sbjct: 137 ANSSGMNASFAPYLPLPGKASLVSQSGALLIAIDASTYVRGVGFDKLISIGN--MSDLDF 194 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 D++E D T +I + E + +F+ + KPI+ AG ++ Sbjct: 195 ADIIEWLNDDPNTTAITLYIEGF----KNGRRFMDVCRR--TNKPIIALKAGVSSHGAAA 248 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 ++ G A+ A ++AG+ A + Sbjct: 249 AASHTGSLA---GAAKVYGAAFQQAGVVQASDLDNL 281 >gi|318061281|ref|ZP_07980002.1| acyl-CoA synthetase [Streptomyces sp. SA3_actG] Length = 1004 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 92/250 (36%), Gaps = 20/250 (8%) Query: 51 GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV--- 107 G VP F TV E E + +V+ VP +A+ E E + +V I+ G Sbjct: 285 GTLDGVPAFRTVKEIGE--DVDLAVVVVPAERVPEAVAECGEHGVRGLVVISAGYGESVT 342 Query: 108 ---LDMVRVKARLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTL 162 R+ + RL+GPN G++ D + + +G VG+ ++SG + Sbjct: 343 AGRARQRRLVRQARSYGMRLVGPNAFGLVNTDPAVRLNASLAPELAPRGRVGLFTQSGAI 402 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 + + Q G G ST V G DVL+ + D T+ +M E G+ Sbjct: 403 GIALLSELHQRGTGLSTFVSAGNRA--DVSGNDVLQYWYDDPDTDVALMYLESIGNP--- 457 Query: 223 AAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +F + + KP+V + HA A + +AG+ Sbjct: 458 -RKFTRLARRAAATKPLVVVQGARH-SAATPPSHAVAETRLPHATVSALLA---QAGVIR 512 Query: 283 APSPARIGRS 292 + + + Sbjct: 513 VETVTDLVDT 522 >gi|229491257|ref|ZP_04385083.1| CoA-binding domain protein [Rhodococcus erythropolis SK121] gi|229321796|gb|EEN87591.1| CoA-binding domain protein [Rhodococcus erythropolis SK121] Length = 734 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 104/263 (39%), Gaps = 27/263 (10%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P G V + TV + + + +V+ VP + + ++ + Sbjct: 83 FTGPVYPVNAEHRSVHG---VRAYPTVRDIPD--DVDLAVVAVPAESINSVLDDCLDKGV 137 Query: 96 PLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSI 147 +V ++ G ++ RLIGPN G+ P + + Sbjct: 138 KALVVVSSGFSESGPDGRSSERKLVHAARAHGMRLIGPNALGVANNDPAISLNATLAPVL 197 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 G+VG +SG L + + ++ +G S V G D+L+ + +D++TE Sbjct: 198 PVAGNVGFFCQSGALGIAILDEAARSRIGLSAFVSAGNRA--DVSGNDLLQYWDSDQSTE 255 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 +++ E G+ +F + + RKKPIV +G+ A P + + G Sbjct: 256 VVLLYLESFGNP----RKFSRIARRVARKKPIVAVKSGRHAVPPV-------LAATGVEI 304 Query: 268 AEDKINA-MKEAGICIAPSPARI 289 + + A ++AG+ S +++ Sbjct: 305 DDSIVRALFEQAGVIQVGSISQL 327 >gi|117920666|ref|YP_869858.1| CoA-binding domain-containing protein [Shewanella sp. ANA-3] gi|117612998|gb|ABK48452.1| CoA-binding domain protein [Shewanella sp. ANA-3] Length = 904 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 108/301 (35%), Gaps = 29/301 (9%) Query: 7 KNTKVLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 K T V + G + +AG + + + + + PK + V + + Sbjct: 11 KPTSVAIIGASNSEKRAGNVLMKNLLSSGFSGPIMPVTPK------YRAVMGVLAYPNIE 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------VKAR 116 + + +VI S + + + + + G+ Sbjct: 65 ALPIKP--DLAVICTRASRVPAIVETLAQFGCKVAIIMASGMAQEMNEEGVSLLNLAMQH 122 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ R++GPN G+L P + + G + +S+S + + + +G+G Sbjct: 123 AKRYGMRILGPNSLGMLLPPLGLNASLAHASALPGKIAFVSQSAAICTTVLDWANNKGIG 182 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+ + +G F ++L+ D T +I++ + E FL R Sbjct: 183 FSSFISLG--DATDINFDELLDFLGRDSRTSAIMLYIDSVN----EKRHFLSAARAASRN 236 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVE 295 KPI+ +G++A R A + +GG GG + A + AG+ + ++ Sbjct: 237 KPILVIKSGRSAEGVR----AAKLHTGGIGGNDAVYEAAFRRAGMLRVNDLIELFAAVES 292 Query: 296 L 296 L Sbjct: 293 L 293 >gi|289664731|ref|ZP_06486312.1| putative acetyltransferase (GNAT) family protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 902 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 89/233 (38%), Gaps = 13/233 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 + VI P + + + + +T G+ P R++A R++GP Sbjct: 70 PDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGSGPGSPAARMEASARAKGMRILGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 +C G++ P + + + G + ++S S + V +G S V +G Sbjct: 130 HCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLG--D 187 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 +F D+L+ F D T +I++ E G +A +F+ R KP+V +G+ Sbjct: 188 TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVVKSGRQ 243 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 R +AG G A AG+ + + + E LG L Sbjct: 244 Y---RINPNAGTHAQALAGSDAVYGAAFARAGLLRVGALDELFAA-AETLGRL 292 >gi|254503300|ref|ZP_05115451.1| acetyltransferase, GNAT family [Labrenzia alexandrii DFL-11] gi|222439371|gb|EEE46050.1| acetyltransferase, GNAT family [Labrenzia alexandrii DFL-11] Length = 910 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 89/242 (36%), Gaps = 15/242 (6%) Query: 60 TTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKA 115 T+V+ E + A + + I E + ++ + G P M + Sbjct: 58 TSVSSLAELKHAPDLVIYLAKAEKLPRVIEELGDRGTRAVLIPSPGYEYWPEPIMQACRE 117 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 K++ RLIGP GI P ++ + KG + SRSG + + Sbjct: 118 AARKTTLRLIGPGSLGISVPAKGLNALLSAEVPGKGDIAFFSRSGAVLNATLSWAKTHNT 177 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S+ V +G + D+++ F D T +IV+ E +F+ R Sbjct: 178 GFSSIVSLGAR--IDVDVSDLIDYFAQDYRTRAIVLHLEGVAVPH----KFMSAARAAAR 231 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGICIAPSPARIGRSLV 294 KP++ +G++ R G G +G ++ A + AG+ + +L Sbjct: 232 GKPVIVLRSGRS----RDTGGTGRTHAGRLAKSDLVYETAFRRAGLLRVYDLDEMFEALE 287 Query: 295 EL 296 L Sbjct: 288 TL 289 >gi|219852506|ref|YP_002466938.1| CoA-binding domain protein [Methanosphaerula palustris E1-9c] gi|219546765|gb|ACL17215.1| CoA-binding domain protein [Methanosphaerula palustris E1-9c] Length = 676 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 83/209 (39%), Gaps = 15/209 (7%) Query: 86 AIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCK 139 I E+ + ++ + V I+ G A +S R++GPN GI+ P + Sbjct: 309 VIREAAKKQVRIAVIISAGFRETGEAGRVLEEEVIALATANSIRVVGPNSLGIMLPGARI 368 Query: 140 IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL 199 + G + +S+SG + V + G+G S +G G F D L+L Sbjct: 369 NTTFDPVTPKGGYLAFISQSGAVITMIVDWSLPVGIGFSLVASVGNQADLG--FQDYLKL 426 Query: 200 FLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGA 259 D AT+++++ E + FLK + KP++ AG +A + Sbjct: 427 AEQDPATKAVILYIEEL----RDGCGFLKVARRITVTKPVIAVKAGSSAIGRTSASSHTG 482 Query: 260 VISGGKGGAEDKINAMKEAGICIAPSPAR 288 ++G A+ +AG+ +A S Sbjct: 483 SLAGDDPVYR---AALTQAGVVMARSLTE 508 >gi|14590516|ref|NP_142584.1| hypothetical protein PH0625 [Pyrococcus horikoshii OT3] gi|3257031|dbj|BAA29714.1| 440aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 440 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 97/261 (37%), Gaps = 24/261 (9%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK G +G + + K + S+I +P I E ++ Sbjct: 40 PVNPKGGEVEVSGRRFII-------KRKLDEFVDVSIIVIPAKLVPGLIRE-LKGLTKGA 91 Query: 99 VCITEGIPVLDMVRV----KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 V I+ G + V + ++S R+IGPNC GI G + G + Sbjct: 92 VVISAGFSEVGNVELEEELIRAAKESGIRIIGPNCAGIFGVHGKFFGSFEVRV-NPGGLA 150 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++S+SG A+ ++E +G S V G + D L F DE T+ I + E Sbjct: 151 LISQSGAFGGAALAMGNEENVGFSAFVSYGNAA--DLDESDFLRYFADDENTKVIALYIE 208 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKIN 273 ++ +F + KKP++ AGK+ + H G++ G E Sbjct: 209 ----GVKDGRKFFEALKYATSKKPVIILKAGKSKSGAKAAQSHTGSLA----GSYEIYQA 260 Query: 274 AMKEAGICIAPSPARIGRSLV 294 A K+A + + Sbjct: 261 AFKQANAIEVEEMEELFDAAK 281 >gi|59713751|ref|YP_206526.1| fused acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Vibrio fischeri ES114] gi|59481999|gb|AAW87638.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Vibrio fischeri ES114] Length = 892 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 105/286 (36%), Gaps = 35/286 (12%) Query: 36 VVGGIHPKKGSTYWT---------GGNVNV-PVFTTVAEAKERTA-------ANASVIYV 78 + IHP + T G + V P + +V + +++ Sbjct: 16 IGASIHPDRAGHIVTRNLLEGGFNGPIMPVHPSYKSVCGILAYKQISELPITPDFAILCT 75 Query: 79 PPSGAGDAIIESIEAEIPLIVCIT-------EGIPVLDMVRVKARLEKSSSRLIGPNCPG 131 I E E + + ++ GI K K + R++GPN G Sbjct: 76 EAKKNIAIIEELGEKGVRCAIILSSDMNLYCNGIGEPLPYEAKRIAAKYNMRILGPNSLG 135 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 I+ P KG++ +S+S + + +++ +G S V +G Sbjct: 136 IILPWINLNASFSPINANKGNIAFISQSAAVCTTILDWANEKNIGFSAFVSLGDG--LDI 193 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F ++L+ D TE+I++ + + ++A QF+ R + I+ +G++ Sbjct: 194 DFSELLDTLCTDSKTEAILLYID----SIKDARQFMSAARAAARNRRILVVKSGRS---- 245 Query: 252 RTMGHAGAVISGGKGGAEDKIN-AMKEAGICIAPSPARIGRSLVEL 296 A + + G+ + + A++ AG+ + + ++ L Sbjct: 246 VAGSKAAQLHTNGQLSLDAVYDSAIRRAGMLRVSNTHELFAAVETL 291 >gi|333023988|ref|ZP_08452052.1| putative acyl-CoA synthetase [Streptomyces sp. Tu6071] gi|332743840|gb|EGJ74281.1| putative acyl-CoA synthetase [Streptomyces sp. Tu6071] Length = 988 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 92/250 (36%), Gaps = 20/250 (8%) Query: 51 GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV--- 107 G VP F TV E E + +V+ VP +A+ E E + +V I+ G Sbjct: 269 GTLDGVPAFRTVKEIGE--DVDLAVVVVPAERVPEAVAECGEYGVRGLVVISAGYGESVT 326 Query: 108 ---LDMVRVKARLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTL 162 R+ + RL+GPN G++ D + + +G VG+ ++SG + Sbjct: 327 AGRARQRRLVRQARSYGMRLVGPNAFGLVNTDPAVRLNASLAPELAPRGRVGLFTQSGAI 386 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 + + Q G G ST V G DVL+ + D T+ +M E G+ Sbjct: 387 GIALLSELHQRGTGLSTFVSAGNRA--DVSGNDVLQYWYDDPDTDVALMYLESIGNP--- 441 Query: 223 AAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +F + + KP+V + HA A + +AG+ Sbjct: 442 -RKFTRLARRAAATKPLVVVQGARH-SAATPPSHAVAETRLPHATVSALLA---QAGVIR 496 Query: 283 APSPARIGRS 292 + + + Sbjct: 497 VETVTDLVDT 506 >gi|119871805|ref|YP_929812.1| CoA-binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119673213|gb|ABL87469.1| CoA-binding domain protein [Pyrobaculum islandicum DSM 4184] Length = 461 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 99/267 (37%), Gaps = 22/267 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK G + + ++ E VI P A + E+ + + + Sbjct: 51 AVNPKYSVEKIYGKEIQF--YKDISSLPEVPE--LVVIATPAEVALGILEEAGRSGVKAV 106 Query: 99 VCITEGIPVLDMVRV----KARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRK 150 + ++ G + V + K R++GPNC G+ D+ + I + R Sbjct: 107 IVVSGGFAEVGRVDLENELIKIARKYGVRILGPNCIGVYNAFNGLDTMFLPIEKAARPRP 166 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G + LS+SG + + + E +G AV G D+++ E + + Sbjct: 167 GPIAFLSQSGAVMTAVLDWAAGEEIGVGIAVNFGNR--SDITEADLIQYLGGVEEIKVVA 224 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAE 269 + E +A +F+K + KKP+V + AG++ R H A+ G + Sbjct: 225 IYLEGFRW-RGDAMRFIKA--VKSLKKPVVVYKAGRSDDSKRAAVSHTAAMA----GDYK 277 Query: 270 DKINAMKEAGICIAPSPARIGRSLVEL 296 K+AG+ A + L Sbjct: 278 MYRALFKQAGVIEAEDLVELFDIAKAL 304 >gi|258568988|ref|XP_002585238.1| hypothetical protein UREG_05927 [Uncinocarpus reesii 1704] gi|237906684|gb|EEP81085.1| hypothetical protein UREG_05927 [Uncinocarpus reesii 1704] Length = 486 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 53/118 (44%), Positives = 76/118 (64%), Gaps = 1/118 (0%) Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKPIVG 241 +GGD + GT+F+D L++F D+ T I++VGEIGG+AE +AA+++KD A+ KPI+ Sbjct: 1 MGGDVLAGTDFVDALKVFEHDDDTHGIIIVGEIGGAAELDAAEWIKDYHARTANPKPIMA 60 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V G AP GR MGHAGA + G+ A+ KI A++ AG I P + G + LL S Sbjct: 61 LVGGIEAPQGRIMGHAGAWAAPGEADAQTKIKALQNAGAVIVDHPEKFGEGMKILLSS 118 >gi|295836105|ref|ZP_06823038.1| GNAT family acetyltransferase [Streptomyces sp. SPB74] gi|295825867|gb|EFG64535.1| GNAT family acetyltransferase [Streptomyces sp. SPB74] Length = 698 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 93/250 (37%), Gaps = 20/250 (8%) Query: 51 GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV--- 107 G VP F TVAE E + +V+ VP +A+ E E + +V I+ G Sbjct: 303 GTLDGVPAFRTVAETGE--DIDLAVVVVPAERVPEAVAECGEHGVRGLVVISAGYGESVT 360 Query: 108 ---LDMVRVKARLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTL 162 R+ + RL+GPN G++ D + + +G VG+ ++SG + Sbjct: 361 AGRARQRRLVRQARSYGMRLVGPNAFGLVNTDPAVRLNASLAPELAPRGRVGLFTQSGAI 420 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 + + Q G G ST V G DVL+ + D T+ +M E G+ Sbjct: 421 GIALLSELHQRGTGLSTFVSAGNRA--DVSGNDVLQYWYDDPGTDVALMYLESIGNP--- 475 Query: 223 AAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +F + + KP+V + HA A + +AG+ Sbjct: 476 -RKFTRLARRAAATKPLVVVQGARH-SAATPPSHAVAETRLPHATVSALLA---QAGVIR 530 Query: 283 APSPARIGRS 292 + + + Sbjct: 531 VETVTDLVDT 540 >gi|217973269|ref|YP_002358020.1| CoA-binding domain-containing protein [Shewanella baltica OS223] gi|217498404|gb|ACK46597.1| CoA-binding domain protein [Shewanella baltica OS223] Length = 901 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 107/301 (35%), Gaps = 29/301 (9%) Query: 7 KNTKVLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 K T V + G + +AG + + + + + PK + V + + Sbjct: 11 KPTSVAIIGASNTEKRAGNVLMKNLLSSGFSGPIMPVTPK------YRAVMGVLAYPNIE 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------VKAR 116 + + +VI + + + + + G+ Sbjct: 65 ALPIKP--DLAVICTRACRVPAIVETLAQFGCKVAIIMASGMAQEFNEDGVSLLELTMQN 122 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ R++GPN G+L P + + G + +S+S + + + +G+G Sbjct: 123 AKRYGMRILGPNSLGMLLPPLGLNASLAHASALPGKIAFVSQSAAICTTVLDWANNKGIG 182 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+ + +G F ++L+ D T +I++ + E FL R Sbjct: 183 FSSFISLG--DATDINFDELLDYLGRDSRTSAIMLYIDSVN----EKRHFLSAARAASRN 236 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVE 295 KPI+ +G++A R A + +GG GG + A + AG+ + ++ Sbjct: 237 KPILVIKSGRSAEGAR----AAKLHTGGVGGNDAVYEAAFRRAGMLRVNDLIELFAAVES 292 Query: 296 L 296 L Sbjct: 293 L 293 >gi|119719253|ref|YP_919748.1| CoA-binding domain-containing protein [Thermofilum pendens Hrk 5] gi|119524373|gb|ABL77745.1| CoA-binding domain protein [Thermofilum pendens Hrk 5] Length = 508 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 99/257 (38%), Gaps = 29/257 (11%) Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM----VRV 113 VF +V + + +VI +P AI + I + I+ G + V Sbjct: 63 VFPSVKDIP--GEVDLAVIVIPAEHVKRAIEDLGVKGIKAAIIISAGFSEIGRSDLEREV 120 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIM--------------PGSIFRKGSVGILSRS 159 +K R+IGPNC G+ +P S I KG V ++S+S Sbjct: 121 AETAKKHGIRIIGPNCIGVYSPWSGVDTIFLPYTKVLEDGREVLNAPRPSKGFVALISQS 180 Query: 160 GTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSA 219 G + A+ EG+G S V IG + ++++E D+ T I++ E Sbjct: 181 GAVGTAALDYMYGEGIGLSHFVSIGNKA--DVDEVELVEYLGGDDRTRVILLYLENI--- 235 Query: 220 EEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 + +F++ K KKP+V AG+T+ R A ++G + A + +G Sbjct: 236 -KRGREFIEVAGKVTLKKPVVVLKAGRTSAGRRAAASHTAALAGVDEVYD---AAFRRSG 291 Query: 280 ICIAPSPARIGRSLVEL 296 + A + L Sbjct: 292 VIRANDIEELFDYAKAL 308 >gi|298530844|ref|ZP_07018246.1| GCN5-related N-acetyltransferase [Desulfonatronospira thiodismutans ASO3-1] gi|298510218|gb|EFI34122.1| GCN5-related N-acetyltransferase [Desulfonatronospira thiodismutans ASO3-1] Length = 901 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 95/290 (32%), Gaps = 38/290 (13%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA------- 70 G G+ + + ++P+ + VA Sbjct: 25 GSIGSVVMHNMLRGGLPGPILPVNPR---------------YDAVAGILAYPGVRELPLV 69 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP-------VLDMVRVKARLEKSSSR 123 + +++ PP + E ++ ++ + RV ++ S R Sbjct: 70 PDLALVCTPPDTVPGLMQELGIKGTRTVLIMSRDLNKQLDESGQTLQQRVLKTAKEHSMR 129 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GP+C GI+ P S + +G + +S+S L + +G+G S + + Sbjct: 130 ILGPDCLGIIVPRSGLNASFGHTDIAQGKIAFVSQSDALGIAVLDWAGSKGIGFSHFISL 189 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G +F D+++ D + SI++ E + A +F+ R KP+V Sbjct: 190 G--DCLDIDFGDIIDYLKGDPHSTSILLYMESVSN----ARKFISAARSASRNKPLVVIK 243 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 K + I + + AG+ A + ++ Sbjct: 244 GDKFNISAVRD---ASYIDSPVSTDDIYDGVFRRAGMLRVFDLAELFDAV 290 >gi|160875481|ref|YP_001554797.1| CoA-binding domain-containing protein [Shewanella baltica OS195] gi|160861003|gb|ABX49537.1| CoA-binding domain protein [Shewanella baltica OS195] gi|315267668|gb|ADT94521.1| CoA-binding domain protein [Shewanella baltica OS678] Length = 901 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 107/301 (35%), Gaps = 29/301 (9%) Query: 7 KNTKVLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 K T V + G + +AG + + + + + PK + V + + Sbjct: 11 KPTSVAIIGASNTEKRAGNVLMKNLLSSGFSGPIMPVTPK------YRAVMGVLAYPNIE 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------VKAR 116 + + +VI + + + + + G+ Sbjct: 65 ALPIKP--DLAVICTRACRVPAIVETLAQFGCKVAIIMASGMAQEFNEDGVSLLDLTMQN 122 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ R++GPN G+L P + + G + +S+S + + + +G+G Sbjct: 123 AKRYGMRILGPNSLGMLLPPLGLNASLAHASALPGKIAFVSQSAAICTTVLDWANNKGIG 182 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+ + +G F ++L+ D T +I++ + E FL R Sbjct: 183 FSSFISLG--DATDINFDELLDYLGRDSRTSAIMLYIDSVN----EKRHFLSAARAASRN 236 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVE 295 KPI+ +G++A R A + +GG GG + A + AG+ + ++ Sbjct: 237 KPILVIKSGRSAEGAR----AAKLHTGGVGGNDAVYEAAFRRAGMLRVNDLIELFAAVES 292 Query: 296 L 296 L Sbjct: 293 L 293 >gi|153006019|ref|YP_001380344.1| GCN5-ike N-acetyltransferase [Anaeromyxobacter sp. Fw109-5] gi|152029592|gb|ABS27360.1| GCN5-related N-acetyltransferase [Anaeromyxobacter sp. Fw109-5] Length = 812 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 95/254 (37%), Gaps = 23/254 (9%) Query: 45 GSTYWTGGNVNVP--VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCIT 102 G + G +P V + A+ + +++ PP+ + + E + V Sbjct: 41 GPIHVVGEAAELPAGVRRCASLAELEGEVDLAIVAAPPASIPEIVGACAERHVAGAVIAA 100 Query: 103 -------EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGI 155 G P D + RL+GPN G+ PD+ GS+G+ Sbjct: 101 SASGSVGPGEPDPDAAAALLAAARGGVRLLGPNSVGLARPDARLNATFTSGSASPGSIGL 160 Query: 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEI 215 +S+SG L A+ + +G S V +G +F +VLE D AT+S+++ E Sbjct: 161 VSQSGALCATALDWAAAHRIGFSAVVSLG--DALDVDFGEVLEYLALDPATKSVLLYVET 218 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 + A FL R KP+V AG+ AGA + + A+ Sbjct: 219 LRA----ARPFLSGLRLAARLKPVVVVKAGR--------HGAGADGAPPASSDDAFDAAL 266 Query: 276 KEAGICIAPSPARI 289 AG S R+ Sbjct: 267 ARAGAVRVESMDRM 280 >gi|153000772|ref|YP_001366453.1| CoA-binding domain-containing protein [Shewanella baltica OS185] gi|151365390|gb|ABS08390.1| CoA-binding domain protein [Shewanella baltica OS185] Length = 901 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 107/301 (35%), Gaps = 29/301 (9%) Query: 7 KNTKVLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 K T V + G + +AG + + + + + PK + V + + Sbjct: 11 KPTSVAIIGASNTEKRAGNVLMKNLLSSGFSGPIMPVTPK------YRAVMGVLAYPNIE 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------VKAR 116 + + +VI + + + + + G+ Sbjct: 65 ALPIKP--DLAVICTRACRVPAIVETLAQFGCKVAIIMASGMAQEFNEDGVSLLDLTMQN 122 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ R++GPN G+L P + + G + +S+S + + + +G+G Sbjct: 123 AKRYGMRILGPNSLGMLLPPLGLNASLAHASALPGKIAFVSQSAAICTTVLDWANNKGIG 182 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+ + +G F ++L+ D T +I++ + E FL R Sbjct: 183 FSSFISLG--DATDINFDELLDYLGRDSRTSAIMLYIDSVN----EKRHFLSAARAASRN 236 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVE 295 KPI+ +G++A R A + +GG GG + A + AG+ + ++ Sbjct: 237 KPILVIKSGRSAEGAR----AAKLHTGGVGGNDAVYEAAFRRAGMLRVNDLIELFAAVES 292 Query: 296 L 296 L Sbjct: 293 L 293 >gi|289670853|ref|ZP_06491928.1| putative acetyltransferase (GNAT) family protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 514 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 89/233 (38%), Gaps = 13/233 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 + VI P + + + + +T G+ P R++A R++GP Sbjct: 70 PDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGSGPGSPAARMEASARAKGMRILGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 +C G++ P + + + G + ++S S + V +G S V +G Sbjct: 130 HCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLG--D 187 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 +F D+L+ F D T +I++ E G +A +F+ R KP+V +G+ Sbjct: 188 TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVVKSGRQ 243 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 R +AG G A AG+ + + + E LG L Sbjct: 244 Y---RINPNAGTHAQALAGSDAVYGAAFARAGLLRVGALDELFAA-AETLGRL 292 >gi|307726310|ref|YP_003909523.1| CoA-binding domain-containing protein [Burkholderia sp. CCGE1003] gi|307586835|gb|ADN60232.1| CoA-binding domain protein [Burkholderia sp. CCGE1003] Length = 731 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 19/293 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ ++ + +V V G + + G G I+P G+ + Sbjct: 276 MNRIMKPD-RVAVIGASAEEGKIGNSVMKNLINGGYQGEIYPIHPKADEIMGHKA---YK 331 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR----VKAR 116 +V + + +V +P A+ E + IP V I G V + A Sbjct: 332 SVLDVP--GDIDVAVFAIPAKFVAGALTEVGKKHIPGAVLIPSGFAETGNVEGQQEIVAI 389 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + RL+GPN G +G + S+SG + + + +G Sbjct: 390 AREYGIRLMGPNIYGFYYTPKNLCATFCTPYDVQGKAALSSQSGGIGMAIIGFSRSAKMG 449 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S VG+G + D+L F D+ T+ I E ++ F + A+ +K Sbjct: 450 VSAIVGLGNKSDIDED--DLLTFFEQDDNTDIIAQHCEDL----KDGRAFAEAAARVSKK 503 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KP+V AG+T+ R ++G ED ++ G+ A S + Sbjct: 504 KPVVVLKAGRTSLGARAASSHTGALAGNDRIYEDV---FRQCGVIRARSLRDL 553 >gi|152990670|ref|YP_001356392.1| hypothetical protein NIS_0924 [Nitratiruptor sp. SB155-2] gi|151422531|dbj|BAF70035.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 636 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 98/256 (38%), Gaps = 26/256 (10%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P+ + V+ +V E + + +VI +PP D + + + + + Sbjct: 256 FVNPR------LNTLFDQKVYHSVEEL---PSIDTAVIAIPPGYVLDLLEQLGQKGVKNV 306 Query: 99 VCITEGIPVLDMVRVKARL----EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 V I+ G + + ++ +K ++GPNC GI + G +G Sbjct: 307 VVISAGFKESGNEQAEEQMSETAQKYGMNIVGPNCLGIYNASKRLNLTFAKTDILPGDIG 366 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++S+SG + + + + +G S + +G + +F D +E A E Sbjct: 367 LVSQSGAVLAALIDKATSHSIGFSHIISLGN--MADFDFADAIEELNAKEECH----FIN 420 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKIN 273 I ++ ++LK + KKPI + +GKT + H G + G E + Sbjct: 421 IYAEGLKDGKRYLKAIRES--KKPIFVYKSGKTKEAKKAAFSHTGNI----SGSYEMLVG 474 Query: 274 AMKEAGICIAPSPARI 289 AG I + Sbjct: 475 LSFAAGALIKKDIDEL 490 >gi|237732570|ref|ZP_04563051.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226908109|gb|EEH94027.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 886 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 104/280 (37%), Gaps = 27/280 (9%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPNINSLP-----FSPDLAVLC 76 Query: 78 VPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD 136 S A++E++ E + ++ P + A + + RL+GPN G+L P Sbjct: 77 TNASRNL-ALLEALGEKGCKTCIILSA--PAAQHAELLACASRYNIRLLGPNSLGLLAPW 133 Query: 137 SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 ++G + +S+S ++ + Q +G S + +G + ++ Sbjct: 134 QGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--EL 191 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGH 256 L+ D T +I++ E +A +F+ R KPI+ +G++ P + + H Sbjct: 192 LDYLARDSKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLH 246 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 247 TSAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|113867997|ref|YP_726486.1| Acyl-CoA synthetase (NDP forming) [Ralstonia eutropha H16] gi|113526773|emb|CAJ93118.1| Acyl-CoA synthetase (NDP forming) [Ralstonia eutropha H16] Length = 898 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 88/251 (35%), Gaps = 19/251 (7%) Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI--PVLDMVRVK 114 P + V + +V+ P I E A + +T G P Sbjct: 58 PCYARVGALPA--PPDLAVLCTPAPTIPGLIAELGAAGTRAAIVLTAGFEGPEDSAAGAL 115 Query: 115 A-----RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 R++GPNC G++ R+G + ++SG L + Sbjct: 116 RQAMLDAARPHLLRILGPNCVGLIASGISLNASFAPGAARQGKLAFATQSGALATAVLDW 175 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + +G S + +G + DVL+ D T +I++ E A A+F+ Sbjct: 176 SRSRQIGFSHFISLGNSA--DVDAADVLDYLAGDAGTHAILLYVE----AIRHGAKFMSA 229 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 R KP++ G++A R ++G + A++ AG+ S + Sbjct: 230 ARAAARNKPVLIVKGGRSAQAARAAASHTGAMAGADDVYD---AAIRRAGMLRVDSTEGL 286 Query: 290 GRSLVELLGSL 300 ++ E+L + Sbjct: 287 FDAV-EMLARM 296 >gi|77361528|ref|YP_341103.1| acyl-CoA synthetase, NAD(P)-binding, ATP-binding [Pseudoalteromonas haloplanktis TAC125] gi|76876439|emb|CAI87661.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding [Pseudoalteromonas haloplanktis TAC125] Length = 888 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 103/297 (34%), Gaps = 31/297 (10%) Query: 1 MSILVDKNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVP 57 +S + ++ V V G + +AG + + + P G + P Sbjct: 6 ISQFFNPSS-VAVIGASNTPTRAGYVVMRNLLQSGFKGPIMPVTPN---HTAVHGVLAYP 61 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + + + +VI + I + + + I +G+ +K Sbjct: 62 SIDALPKV-----PDLAVICTNKNTLDLIIEQLGKLGCHNAIIIADGLSNAQKQTLKECA 116 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 L+GPN G+L P ++ G + +S+S + + + +G Sbjct: 117 RSHQVTLLGPNSLGLLIPHIGLNASFSHTVASPGKLAFVSQSAAVCSTILDWAKNKEIGF 176 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V +G +F ++L+ D T +I++ + E++ F+ K Sbjct: 177 SYFVSMG--DCLDIKFTELLDFLGRDAKTTAILLYIDNI----EDSRSFISAARAAAFSK 230 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGG----AEDKINA-MKEAGICIAPSPARI 289 P++ G+ HAGA+ + + G ++ +A + AG+ + Sbjct: 231 PVIVIKTGR--------THAGAIAAEAQSGIAHSSDAVYDALFQRAGMLRVNDLREL 279 >gi|218783011|ref|YP_002434329.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764395|gb|ACL06861.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 725 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 101/300 (33%), Gaps = 32/300 (10%) Query: 5 VDKNTKVLVQ----GLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 + + +V ++G AG F + I+PK + Sbjct: 258 FNAESVAVVGATKPNISGFAGMFGCMHLFGFKGRLY--PINPK------LDEIYGHKAYP 309 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD-------MVRV 113 + E+ + ++ VP + E + I T G + Sbjct: 310 NLTALPEK--VDLVIVSVPAQVVPGVLRECVATGNKTIHIFTAGFKESGEEEGVRLQKEM 367 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS-Q 172 K + R+IGPNC G P+ + S + G + ++S+SG E + + Sbjct: 368 KQIAVEGGLRVIGPNCMGFYVPNRRMLTWQKASK-KSGPIALISQSGGNAQEITHYATGR 426 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+G + V G E D L+ D+ TE I M E + +FLK + Sbjct: 427 YGIGFNKVVSYGNA--LTVESADFLDYLAGDDETEIITMYLE----GLKNGRRFLKLAEE 480 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 +KKPI+ + G + + + ++GG ++ G + S + Sbjct: 481 TNKKKPILIYKGGLSETGAQAVSSHTGALAGGPKIWHSF---FRQTGCVLVESVEELAEV 537 >gi|113970435|ref|YP_734228.1| CoA-binding domain-containing protein [Shewanella sp. MR-4] gi|113885119|gb|ABI39171.1| CoA-binding domain protein [Shewanella sp. MR-4] Length = 913 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 108/301 (35%), Gaps = 29/301 (9%) Query: 7 KNTKVLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 K T V + G + +AG + + + + + PK + V + + Sbjct: 20 KPTSVAIIGASNSEKRAGNVLMKNLLSSGFSGPIMPVTPK------YRAVMGVLAYPNIE 73 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------VKAR 116 + + +VI S + + + + + G+ Sbjct: 74 ALPIKP--DLAVICTRASRVPAIVETLAQFGCKVAIIMASGMAQEVNEEGVSLLDLAMQH 131 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ R++GPN G+L P + + G + +S+S + + + +G+G Sbjct: 132 AKRYGMRILGPNSLGMLLPPLGLNASLAHASALPGKIAFVSQSAAICTTVLDWANNKGIG 191 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+ + +G F ++L+ D T +I++ + E FL R Sbjct: 192 FSSFISLG--DATDINFDELLDFLGRDSRTSAIMLYIDSVN----EKRHFLSAARAASRN 245 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVE 295 KPI+ +G++A R A + +GG GG + A + AG+ + ++ Sbjct: 246 KPILVIKSGRSAEGVR----AAKLHTGGIGGNDAVYEAAFRRAGMLRVNDLIELFAAVES 301 Query: 296 L 296 L Sbjct: 302 L 302 >gi|114047372|ref|YP_737922.1| CoA-binding domain-containing protein [Shewanella sp. MR-7] gi|113888814|gb|ABI42865.1| CoA-binding domain protein [Shewanella sp. MR-7] Length = 913 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 108/301 (35%), Gaps = 29/301 (9%) Query: 7 KNTKVLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 K T V + G + +AG + + + + + PK + V + + Sbjct: 20 KPTSVAIIGASNSEKRAGNVLMKNLLSSGFSGPIMPVTPK------YRAVMGVLAYPNIE 73 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------VKAR 116 + + +VI S + + + + + G+ Sbjct: 74 ALPIKP--DLAVICTRASRVPAIVETLAQFGCKVAIIMASGMAQEVNEEGVSLLDLAMQH 131 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ R++GPN G+L P + + G + +S+S + + + +G+G Sbjct: 132 AKRYGMRILGPNSLGMLLPPLGLNASLAHASALPGKIAFVSQSAAICTTVLDWANNKGIG 191 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+ + +G F ++L+ D T +I++ + E FL R Sbjct: 192 FSSFISLG--DATDINFDELLDFLGRDSRTSAIMLYIDSVN----EKRHFLSAARAASRN 245 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVE 295 KPI+ +G++A R A + +GG GG + A + AG+ + ++ Sbjct: 246 KPILVIKSGRSAEGVR----AAKLHTGGIGGNDAVYEAAFRRAGMLRVNDLIELFAAVES 301 Query: 296 L 296 L Sbjct: 302 L 302 >gi|158426281|ref|YP_001527573.1| GCN5-related N-acetyltransferase [Azorhizobium caulinodans ORS 571] gi|158333170|dbj|BAF90655.1| GCN5-related N-acetyltransferase [Azorhizobium caulinodans ORS 571] Length = 898 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 51/242 (21%), Positives = 90/242 (37%), Gaps = 16/242 (6%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + +V + + +V+ PP I + V + D + L+ Sbjct: 60 YHSVGDLP--IQVDLAVLTGPPETLPQTIADLGAKGCRAAVLLASSPGSADAALRQRMLD 117 Query: 119 KSS---SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 + RL+GP+C G ++ + RKG V LS+S L + G+ Sbjct: 118 AARPNLMRLLGPSCLGFISTGPRINASYAHLMPRKGDVAFLSQSAALATAVLDWAEGRGV 177 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 G S +G +F D+L+ D AT +IV+ E +A +F+ R Sbjct: 178 GFSHVASLGDKA--DIDFGDLLDHLAMDSATRAIVLYVESIT----DARKFMSAGRIAAR 231 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLV 294 KP++ AG++A A +G GA+ A + AG+ + ++ Sbjct: 232 AKPVIVIKAGRSAAGA----QAAVSHTGRLAGADAVYDAAFRRAGMLRVYDLRELFEAVT 287 Query: 295 EL 296 L Sbjct: 288 TL 289 >gi|283852914|ref|ZP_06370174.1| CoA-binding domain protein [Desulfovibrio sp. FW1012B] gi|283571672|gb|EFC19672.1| CoA-binding domain protein [Desulfovibrio sp. FW1012B] Length = 702 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 54/273 (19%), Positives = 103/273 (37%), Gaps = 23/273 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G T + ++PK + +PV + + E + +VI Sbjct: 26 GKVGHTVVANMQDAGYTGTLIPVNPK------ADEILGLPVTKRIEDLPE--GLDLAVIV 77 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKARLEKSSSRLIGPNCPG 131 VP ++ I ++ ++ IT G + ++ + ++GPNC G Sbjct: 78 VPVGAVVPSVEALIARKVRSVIIITAGFKEVGKEGYVLEQKLIELCTANDVAMVGPNCLG 137 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 +++ + ++GS+ S+SG L + E +G S + +G V Sbjct: 138 LISTQNHNNASFAAGYPKEGSIAFFSQSGALCTAILDWALGENVGFSKFISLGNKAVI-- 195 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 ++LE D T+ I+ E E A F+++ AK R+KP++ +G T Sbjct: 196 NEANMLEFLRTDPDTKVILGYIENV----EHGAAFIEEAAKITREKPVIMIKSGTTTAGA 251 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 + I+G A ++ G+ A Sbjct: 252 KAASSHTGAIAGSDAAYS---AAFRKTGVIRAE 281 >gi|311898788|dbj|BAJ31196.1| putative acyl-CoA synthetase [Kitasatospora setae KM-6054] Length = 924 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 95/266 (35%), Gaps = 24/266 (9%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPL 97 G ++ +P +V + + +VI VP A+ E + Sbjct: 242 GPVYAVNRGAAPGTDLEGLPAHRSVLDVP--GPVDLAVIAVPEPSVPGAVAECGAHGVQG 299 Query: 98 IVCITEGIPVL------DMVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFR 149 +V ++ G + + + R+IGPN G+L P + ++ Sbjct: 300 LVVVSAGYAETGPDGRDRQRALVRQARAAGMRVIGPNAFGLLNTDPGHRLNASLAPALPD 359 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 +G G+ +SG + + + G G S+ +G D+L+ + D+ATE + Sbjct: 360 RGPFGVFCQSGAIGVALLEAAHRRGTGLSSFASVGNRA--DVSGNDLLQYWEEDDATEVV 417 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT---APPGRTMGHAGAVISGGKG 266 ++ E G+ +F + + KP+V + PPG + A + Sbjct: 418 LLYLESFGNP----RKFTRIARRLAAAKPVVVLKGARHTGSLPPGHAVQPAATRLRDATV 473 Query: 267 GAEDKINAMKEAGICIAPSPARIGRS 292 A ++AG+ + + + Sbjct: 474 DAL-----FQQAGVIRVDTITELFDT 494 >gi|226331065|ref|ZP_03806583.1| hypothetical protein PROPEN_04995 [Proteus penneri ATCC 35198] gi|225201860|gb|EEG84214.1| hypothetical protein PROPEN_04995 [Proteus penneri ATCC 35198] Length = 889 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +AGT + V I+P +GS + ++ + + + ++I Sbjct: 26 RAGTTMMRNLLSGGFNGPVFPINPSRGSVSGVFT------YPSIDKLPQIP--DLAIICT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 + + + E+ ++ ++ +K ++ RL+GPN G+L P Sbjct: 78 HHHRNLELLKQLGESGCKAVIVLSA--QPEQFQPIKLLCQQYHIRLLGPNSLGLLAPWQG 135 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 +KG + +S+S + + +G S + +G + + D+L+ Sbjct: 136 LNASFSPLPVKKGKLAFISQSAAVANTILDWAYYRNIGFSYFIALGDNQDIQVD--DLLD 193 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E ++A +F+ R KPI+ +G+ Sbjct: 194 FLARDSKTSAILLHLEHI----KDARRFMSASRSASRNKPILVIKSGR--------TQKA 241 Query: 259 AVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 ++ G + A + AG+ + ++ L Sbjct: 242 QLLLGDTPSYDVAYDAAFQRAGLLRVQDTHEMFSAVETL 280 >gi|282163119|ref|YP_003355504.1| acetyl-CoA synthetase alpha subunit [Methanocella paludicola SANAE] gi|282155433|dbj|BAI60521.1| acetyl-CoA synthetase alpha subunit [Methanocella paludicola SANAE] Length = 458 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 85/233 (36%), Gaps = 17/233 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSR 123 + ++I VP S A + E ++ + IT G + ++K + R Sbjct: 69 EVDLAIIIVPASAALQVVDECGAKKVKALCVITAGFSEVGPDGAVLEEKLKQKAASYGMR 128 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPN G + + + KG + +++SG L V LG + V Sbjct: 129 MLGPNTMGFVNNSISLNASIVPRMPPKGEISFITQSGALGLSLVDWAIGSNLGMNCVVST 188 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G D+LE F D+ T +I M E ++ +F++ K + K + Sbjct: 189 GNKA--DVSEADLLEFFEQDKGTWTIAMYIE----GLKDGRKFMEAARKVKKAK--LAIK 240 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 AG + R ++G + A ++ G+ + + + L Sbjct: 241 AGVSQAGARAAASHTGSLAGSDAVYD---AAFRQCGVVRVEGVEEMFDAAMAL 290 >gi|148254555|ref|YP_001239140.1| hypothetical protein BBta_3116 [Bradyrhizobium sp. BTAi1] gi|146406728|gb|ABQ35234.1| hypothetical protein BBta_3116 [Bradyrhizobium sp. BTAi1] Length = 713 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 101/276 (36%), Gaps = 21/276 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + + + IHPK + + +V + + +V Sbjct: 277 GKIGNSVMKNLVNGGYKGEIYPIHPK------ASEILGYKAYKSVKDVP--GVIDTAVFA 328 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEKSSSRLIGPNCPGIL 133 +P A+ E E +IP V I G + +K + RL+GPN G Sbjct: 329 IPAKFVAAALAECGEKKIPGAVLIPSGFAEAGAPELQAEIVEVGKKYNIRLMGPNIYGFY 388 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 + + KG + S+SG + + + +G S VG+G + Sbjct: 389 YTPANLCATFCTAYDVKGHAALSSQSGGIGMAIIGFSRSAKMGVSAIVGLGNKSDIDED- 447 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 D+L F D T I E ++ F + + +KKP++ AG+T+ + Sbjct: 448 -DLLAFFEQDPNTNLIAQHCEDL----KDGRAFAEAAKRVSKKKPVIVLKAGRTSAGAKA 502 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 ++G ED +K++G+ A S ++ Sbjct: 503 ASSHTGALAGNDKIYEDV---LKQSGVIRARSLRQL 535 >gi|303245359|ref|ZP_07331643.1| CoA-binding domain protein [Desulfovibrio fructosovorans JJ] gi|302493208|gb|EFL53070.1| CoA-binding domain protein [Desulfovibrio fructosovorans JJ] Length = 703 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 109/283 (38%), Gaps = 28/283 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + + + ++PK + + +PV + + E + +VI Sbjct: 26 GKVGHTVVQNMLDAEFKGTLIPVNPK------SDTILGLPVTKNIEDLPE--GLDLAVIV 77 Query: 78 VPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDM------VRVKARLEKSSSRLIGPNCP 130 VP + +E++ A ++ ++ IT G + ++ K+ ++GPNC Sbjct: 78 VPVKAVVPS-MEALAARKVRSVIIITAGFKEVGREGAVLEQQLIEICTKNDIAMVGPNCL 136 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G+L+ +KGS+ S+SG L + E +G S V +G V Sbjct: 137 GLLSTHDDNNASFAAGYPKKGSIAFFSQSGALCTAILDWALGEEVGFSKFVSMGNMAV-- 194 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 ++LE D T+ I+ E + A F++ AK R+KP++ +G T Sbjct: 195 VNEANMLEYLRTDPNTKVILGYIENVSNG----ADFIEQAAKVCREKPVIMIKSGTTTAG 250 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 + I+G A ++ G+ A +G Sbjct: 251 AKAASSHTGAIAGSDAAY---TAAFRKTGVIRA---GDMGTLF 287 >gi|120555413|ref|YP_959764.1| GCN5-related N-acetyltransferase [Marinobacter aquaeolei VT8] gi|120325262|gb|ABM19577.1| GCN5-related N-acetyltransferase [Marinobacter aquaeolei VT8] Length = 915 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 86/233 (36%), Gaps = 16/233 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD-------MVRVKARLEKSSSR 123 + ++I PP I + E + + +T G+ M V+ ++ R Sbjct: 71 PDLAIICTPPDTVPKMIRKLGECGVRTAIVMTGGMSRTHSKTGQPLMYSVRDAARETGIR 130 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPN G++ P G V + +SGT+ + G+G S + + Sbjct: 131 VLGPNTIGLMVPARHLNATYAHMGAIPGRVAFVGQSGTIASSVLDWAFARGVGFSYFLTL 190 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G + D+++ D T +I++ E +F+ R KP++ Sbjct: 191 GDG--MDIDHDDLIDYLAQDTQTRAILLHIENI----PNPRRFMSAVRVASRTKPVIAVK 244 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +G+ P H A+ +G K ++ AG+ ++ +L L Sbjct: 245 SGRV-PESEWFTH--ALPAGIKRSDPVYDAMLQRAGVLRVDGLGQMFDALETL 294 >gi|149374317|ref|ZP_01892091.1| Acyl-CoA synthetase (NDP forming) [Marinobacter algicola DG893] gi|149361020|gb|EDM49470.1| Acyl-CoA synthetase (NDP forming) [Marinobacter algicola DG893] Length = 914 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 83/233 (35%), Gaps = 16/233 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD-------MVRVKARLEKSSSR 123 + ++I PP I EA + + +T G+ M V+ ++ R Sbjct: 71 PDLAIICTPPDTVPKMIKRLGEAGVRTAIVMTGGMSRSHSKTGQPLMYSVRDAARETGIR 130 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPN G++ P G V + +SGT+ + G+G S + + Sbjct: 131 VLGPNTIGLMVPARSLNATYAHMGAIPGKVAFVGQSGTIASSVIDWAFARGVGFSYFLTL 190 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G + D+++ D T +I++ E +F+ R KP++ Sbjct: 191 GDG--MDIDHDDLIDYLAQDSQTRAILLHIENI----PNPRRFMSAVRVASRTKPVIAVK 244 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +G+ A ++ + ++ AG+ ++ +L L Sbjct: 245 SGRVPESEWFPHELPAGLTQSDPIYD---AMLQRAGVLRVDGLGQMFDALETL 294 >gi|78049719|ref|YP_365894.1| putative acetyltransferase (GNAT) family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038149|emb|CAJ25894.1| putative acetyltransferase (GNAT) family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 902 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 89/234 (38%), Gaps = 15/234 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 + VI P + + + + +T G+ P R+++ R++GP Sbjct: 70 PDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGSGPGSPAARMESAARAKGMRILGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 +C G++ P + + + G + ++S S + V +G S V +G Sbjct: 130 HCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLG--D 187 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 +F D+L+ F D T +I++ E G +A +F+ R KP+V +G+ Sbjct: 188 TLDVDFSDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVVKSGRQ 243 Query: 248 APPG-RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 HA A+ G A AG+ + + + E LG L Sbjct: 244 YRINPNADTHAQALA----GSDAVYGAAFARAGLLRVGALDELFAA-AETLGRL 292 >gi|325927513|ref|ZP_08188751.1| acyl-CoA synthetase (NDP forming) [Xanthomonas perforans 91-118] gi|325542106|gb|EGD13610.1| acyl-CoA synthetase (NDP forming) [Xanthomonas perforans 91-118] Length = 902 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 89/234 (38%), Gaps = 15/234 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 + VI P + + + + +T G+ P R+++ R++GP Sbjct: 70 PDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGSGPGSPAARMESAARAKGMRILGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 +C G++ P + + + G + ++S S + V +G S V +G Sbjct: 130 HCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLG--D 187 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 +F D+L+ F D T +I++ E G +A +F+ R KP+V +G+ Sbjct: 188 TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVVKSGRQ 243 Query: 248 APPG-RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 HA A+ G A AG+ + + + E LG L Sbjct: 244 YRINPNADTHAQALA----GSDAVYGAAFARAGLLRVGALDELFAA-AETLGRL 292 >gi|288560826|ref|YP_003424312.1| ADP-dependent acetyl-CoA synthetase Acs [Methanobrevibacter ruminantium M1] gi|288543536|gb|ADC47420.1| ADP-dependent acetyl-CoA synthetase Acs [Methanobrevibacter ruminantium M1] Length = 699 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 105/292 (35%), Gaps = 21/292 (7%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 + + ++ +V G + G G I+P + + V+ Sbjct: 7 MFNPDSVAIV-GASNSEGKVGYIIVNNMINDGFKGNIYPINPK---DDEIQGLKAYKNVS 62 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARL 117 + E + ++ +P + E E + +V IT G ++ A Sbjct: 63 DLPEVP--DLVIVSIPSVLVNPVVEECGEFGVKNMVVITAGFKEIGGDGVERENQLVALG 120 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 EK +IGPN GI + + +G++ +S+SG + + + G+G Sbjct: 121 EKYGINIIGPNSLGITDSHTPLNASFSQIMPPEGNIAFISQSGAMMVAIIDWSVTSGIGF 180 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S + +G GT I+++E D+ T ++ E + F++ K KK Sbjct: 181 SKIISLGNKA--GTTEIELIEYLSYDDETAVVICYLESITEDD----DFVRTLRKVSYKK 234 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 P++ +G ++ ++G + A K++G+ + + Sbjct: 235 PVIILKSGSSSAGAEAASSHTGALAGSDIAFDT---AFKQSGVFRVTTMDEL 283 >gi|16082167|ref|NP_394609.1| acetyl-CoA synthetase [Thermoplasma acidophilum DSM 1728] gi|10640464|emb|CAC12278.1| probable acetyl-CoA synthetase [Thermoplasma acidophilum] Length = 698 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 98/263 (37%), Gaps = 24/263 (9%) Query: 36 VVGGIHP--KKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 G ++P +KG + V+ ++ + ++ + ++I VP +A E + Sbjct: 42 YQGKVYPVNRKGG-----NILGYTVYPSIGDVPDK--VDLAIISVPAEHTPEAAEECGKK 94 Query: 94 EIPLIVCITEGIPVLDMV----RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 + I+ + G + ++ K + RL+GPN G++ + Sbjct: 95 GVFGIIVVASGFSEVGRKDLEDQLVEVCRKYNMRLLGPNVVGLMNNVLKLNASFAPYLPY 154 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 G++G++S+SG L T G S + IG + +F D++ D I Sbjct: 155 PGTIGMVSQSGALIVGLDAMTWSNKTGTSFLISIGN--MADLDFSDLVSFLAEDNNVSCI 212 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 + E + +F+ KKPIV +G + ++G + Sbjct: 213 SLYTE----GLKAGRRFIDTAR--SIKKPIVMLKSGISKHGSVAAASHTGSLAGSHRVYD 266 Query: 270 DKINAMKEAGICIAPSPARIGRS 292 A+K+AG+ A S + Sbjct: 267 ---GALKQAGVVRANSIEELFDL 286 >gi|27378270|ref|NP_769799.1| hypothetical protein blr3159 [Bradyrhizobium japonicum USDA 110] gi|27351417|dbj|BAC48424.1| blr3159 [Bradyrhizobium japonicum USDA 110] Length = 790 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 99/276 (35%), Gaps = 21/276 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + I + IHPK + + +V + + +V Sbjct: 354 GKIGNSVMKNLINGGYKGDIYPIHPK------ATEILGYKAYKSVKDVP--GVIDTAVFA 405 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEKSSSRLIGPNCPGIL 133 +P A+ E E +IP V I G + +K RL+GPN G Sbjct: 406 IPAKFVAAALTECGEKKIPGAVLIPSGFAEAGAPELQAEIVEVGKKYDIRLMGPNIYGFY 465 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 + + KG + S+SG + + + +G S VG+G + Sbjct: 466 YTPANLCATFCTAYDVKGHAALSSQSGGIGMAIIGFSRSAKMGVSAIVGLGNKSDIDED- 524 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 D+L F D T I E ++ F + + +KKP+V AG+T+ + Sbjct: 525 -DLLAFFEQDPNTNLIAQHCEDL----KDGRAFAEAAKRVSKKKPVVVLKAGRTSAGAKA 579 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 ++G ED + ++G+ A S ++ Sbjct: 580 ASSHTGALAGNDKIYEDVLA---QSGVIRARSLRQL 612 >gi|284030093|ref|YP_003380024.1| CoA-binding domain-containing protein [Kribbella flavida DSM 17836] gi|283809386|gb|ADB31225.1| CoA-binding domain protein [Kribbella flavida DSM 17836] Length = 714 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 102/283 (36%), Gaps = 18/283 (6%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + + G G I+P G + F ++ + Sbjct: 266 VAVIGASNEDGKIGNSVMKNLVNGGYQGEIYPINPK---GGEVLGRKAFASITDVP--GD 320 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR----VKARLEKSSSRLIG 126 + +V VP G A+ + + + + I G V A K R++G Sbjct: 321 VDVAVFAVPAKFVGGALEQCGQKGVAGAILIPSGFAETGEQELQDEVVAIARKHGVRILG 380 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN G +GSV + S+SG + + + +G S VG+G Sbjct: 381 PNIYGYYYLPESLCATFCTPYDVRGSVALSSQSGGIGMAILGFSRSSRMGVSAIVGVGNK 440 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + D+L F D+ T I M E ++ F + ++ +KKP+V AG+ Sbjct: 441 ADIDED--DLLTFFENDDNTNLIAMHLEDL----KDGRAFAETASRVSKKKPVVVLKAGR 494 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 TA R ++G +D ++++G+ AP + Sbjct: 495 TAMGARAASSHTGALAGNDKVYDD---ILRQSGVVRAPGLNEM 534 >gi|254521505|ref|ZP_05133560.1| acetyltransferase, GNAT family [Stenotrophomonas sp. SKA14] gi|219719096|gb|EED37621.1| acetyltransferase, GNAT family [Stenotrophomonas sp. SKA14] Length = 908 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 104/288 (36%), Gaps = 26/288 (9%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE-RTAANASVIY 77 AG V I+P+ + + TV K+ + VI Sbjct: 26 SAGRAVMRNLRGTGFPGKVAWINPR---------HAEIDGIRTVKRLKDLDWVPDLVVIT 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGPNCPGILT 134 P + + + E + + +T + P +V+A R++GP+C G++ Sbjct: 77 APATIVPQVVRTAAERGVQAAIILTAHLGEGPGSLSAQVEAVARAHGLRILGPHCLGVIA 136 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 P + + + G + ++S S + V +G S V +G +F Sbjct: 137 PHARLNASIAAHFPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLG--DTMDVDFG 194 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK--TAPPGR 252 D+L+ F D T +I++ E ++A +F+ R KP+V +G+ PG Sbjct: 195 DLLDYFATDYRTRAILLYVE----QIKDARKFMSAARAAARAKPVVVVKSGRAERVQPGS 250 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 H A+ + A AG+ + + + E LG L Sbjct: 251 RDTHVQALARAD----DVYGAAFNRAGLLRVGALDEL-FTAAESLGRL 293 >gi|197337208|ref|YP_002158131.1| acetyltransferase family protein [Vibrio fischeri MJ11] gi|197314460|gb|ACH63909.1| acetyltransferase family protein [Vibrio fischeri MJ11] Length = 892 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 103/286 (36%), Gaps = 35/286 (12%) Query: 36 VVGGIHPKKGSTYW-------TGGNVNVPV---FTTVAEAKERTA-------ANASVIYV 78 + IHP + +PV + +V + +++ Sbjct: 16 IGASIHPDRAGHIVMRNLLEGGFNGPIMPVHPSYKSVCGILAYKEISELPITPDFAILCT 75 Query: 79 PPSGAGDAIIESIEAEIPLIVCIT-------EGIPVLDMVRVKARLEKSSSRLIGPNCPG 131 + E E + + ++ GI K K + R++GPN G Sbjct: 76 EAKKNVSILEELGEKGVRCAIILSSDMNLYCNGIGEPLPYEAKRIAAKYNMRILGPNSLG 135 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 I+ P KG++ +S+S + + +++ +G S V +G Sbjct: 136 IILPWINLNASFSPINANKGNIAFISQSAAVCTTILDWANEKNIGFSAFVSLGDG--LDI 193 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F ++L+ D TE+I++ + + ++A QF+ R + I+ +G++ Sbjct: 194 DFSELLDTLCTDSKTEAILLYID----SIKDARQFMSAARAAARNRRILVVKSGRS---- 245 Query: 252 RTMGHAGAVISGGKGGAEDKIN-AMKEAGICIAPSPARIGRSLVEL 296 A + + G+ + + A++ AG+ + + ++ L Sbjct: 246 VAGSKAAQLHTNGQLSLDAVYDSAIRRAGMLRVSNTHELFAAVETL 291 >gi|242281138|ref|YP_002993267.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242124032|gb|ACS81728.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 902 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 90/251 (35%), Gaps = 21/251 (8%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEG---IPVLDMVRVKA 115 + V+E + + ++I +P + + I G IP + VR++A Sbjct: 60 YKDVSELPKVP--DLAIICLPLEECPPLLERLRNIGVKACALIGPGFSAIPENERVRLRA 117 Query: 116 ----RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 R++GP G + P + + G + +S+S + + + Sbjct: 118 ELLRAANSPQMRILGPKSLGFIVPAMNLNASLAPLPAKAGKIAFVSQSDSFIPTVLDWAA 177 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +G S V +G F DVL+ +D T SI++ E + +A F+ Sbjct: 178 TNDIGFSHVVSLGSR--IDLTFGDVLDYLGSDAQTRSILLYIE----SIHDARDFMSAAR 231 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHA--GAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 R KP++ G+ A+I+ + A + AG+ + + Sbjct: 232 AASRNKPVLAIRPGQALQHVTQELARLENAMIARADEVYDV---AFRRAGMLRVQTIDGM 288 Query: 290 GRSLVELLGSL 300 + + L SL Sbjct: 289 FDA-AQTLASL 298 >gi|323529473|ref|YP_004231625.1| CoA-binding domain-containing protein [Burkholderia sp. CCGE1001] gi|323386475|gb|ADX58565.1| CoA-binding domain protein [Burkholderia sp. CCGE1001] Length = 731 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 105/293 (35%), Gaps = 19/293 (6%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M+ ++ + +V V G + + G G I+P G+ + Sbjct: 276 MNRIMKPD-RVAVIGASAEEGKIGNSVMKNLINGGYQGEIYPIHPKADEIMGHKA---YK 331 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR----VKAR 116 +V + + +V +P A+ E + IP V I G V + A Sbjct: 332 SVLDVP--GDIDVAVFAIPAKFVAGALTEVGKKRIPGAVLIPSGFAETGNVEGQQEIVAI 389 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + RL+GPN G +G + S+SG + + + +G Sbjct: 390 AREYDIRLMGPNIYGFYYTPKNLCATFCTPYDVQGKAALSSQSGGIGMAIIGFSRSAKMG 449 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S VG+G + D+L F D+ T+ I E ++ F + A+ +K Sbjct: 450 VSAIVGLGNKSDIDED--DLLTFFEQDDNTDIIAQHCEDL----KDGRAFAEAAARVSKK 503 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KP+V AG+T+ R ++G ED K+ G+ A S + Sbjct: 504 KPVVVLKAGRTSLGARAASSHTGALAGNDRIYEDV---FKQCGVIRARSLRDL 553 >gi|325917233|ref|ZP_08179457.1| acyl-CoA synthetase (NDP forming) [Xanthomonas vesicatoria ATCC 35937] gi|325536528|gb|EGD08300.1| acyl-CoA synthetase (NDP forming) [Xanthomonas vesicatoria ATCC 35937] Length = 902 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 88/233 (37%), Gaps = 13/233 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 + VI P + + + + +T G+ P R++A R++GP Sbjct: 70 PDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGSGPGSPAARMEASARAKGMRILGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 +C G++ P + + + G + ++S S + V +G S V +G Sbjct: 130 HCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLG--D 187 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 +F D+L+ F D T +I++ E G +A +F+ R KP+V +G+ Sbjct: 188 TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVVKSGRQ 243 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 R +A G A AG+ + + + E LG L Sbjct: 244 ---FRINPNADTHAQALAGSDAVYGAAFARAGLLRVGALDELFAA-AETLGRL 292 >gi|325920186|ref|ZP_08182145.1| acyl-CoA synthetase (NDP forming) [Xanthomonas gardneri ATCC 19865] gi|325549326|gb|EGD20221.1| acyl-CoA synthetase (NDP forming) [Xanthomonas gardneri ATCC 19865] Length = 902 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 88/233 (37%), Gaps = 13/233 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 + VI P + + + + +T G+ P R++A R++GP Sbjct: 70 PDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGSGPGSPAARMEASARAKGMRILGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 +C G++ P + + + G + ++S S + V +G S V +G Sbjct: 130 HCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLG--D 187 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 +F D+L+ F D T +I++ E G +A +F+ R KP+V +G+ Sbjct: 188 TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVVKSGRQ 243 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 R +A G A AG+ + + + E LG L Sbjct: 244 ---FRINPNADTHAQALAGSDAVYGAAFARAGLLRVGALDELFAA-AETLGRL 292 >gi|331645506|ref|ZP_08346610.1| putative oxidoreductase subunit [Escherichia coli M605] gi|330910128|gb|EGH38638.1| putative oxidoreductase subunit [Escherichia coli AA86] gi|331045668|gb|EGI17794.1| putative oxidoreductase subunit [Escherichia coli M605] Length = 515 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YGTIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAISMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|281177508|dbj|BAI53838.1| conserved hypothetical protein [Escherichia coli SE15] Length = 515 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YGTIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAISMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|57642062|ref|YP_184540.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus kodakarensis KOD1] gi|57160386|dbj|BAD86316.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus kodakarensis KOD1] Length = 440 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 96/260 (36%), Gaps = 22/260 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK G+ +G + K + ++I VP I E I I Sbjct: 42 PVNPKGGTVEVSGKTFEI-------REKLDEQVDTAIIAVPAKIVPALIDE-IGPLIKGA 93 Query: 99 VCITEGIPVLDM----VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 V I+ G + + + K RLIGPNC GI G + + G + Sbjct: 94 VVISAGFSEVGNEELERELVKKARKHGVRLIGPNCAGIFGVHGKFFGSFEVRV-KPGGLA 152 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++S+SG A+ + E +G S V G D LE F DE T++I + E Sbjct: 153 LISQSGAFGGAALAMGNDERIGFSAFVSYGNAA--DLNESDFLEYFADDENTKAIALYIE 210 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 ++ +FL KKPI+ AGK+A + ++ G E A Sbjct: 211 ----GVKDGRRFLNALRYASSKKPIIVLKAGKSASGAKAAASHTGSLA---GSYEIYRAA 263 Query: 275 MKEAGICIAPSPARIGRSLV 294 K+AG + + Sbjct: 264 FKQAGAIEVEEMEELFDAAK 283 >gi|224824771|ref|ZP_03697878.1| GCN5-related N-acetyltransferase [Lutiella nitroferrum 2002] gi|224603264|gb|EEG09440.1| GCN5-related N-acetyltransferase [Lutiella nitroferrum 2002] Length = 893 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 104/270 (38%), Gaps = 21/270 (7%) Query: 35 QVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE 94 G + P + GG VP +V +V+ + + + Sbjct: 39 NFQGKLFPVNLNHKVVGGMRAVP---SVRLI--EGEVELAVVTTALRALPAILRDCGKKG 93 Query: 95 IPLIVCI-----TEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 + ++ +E + + + R++GPN G++ P + S R Sbjct: 94 VKAVLLAKEFADSEQLEREILKESLSIARHFGIRVLGPNVLGLMRPVAGFNASNYSSKVR 153 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 G++ ++S+S L + +G+G S+ + +G +F ++L+ +AD T+ I Sbjct: 154 PGNLALVSQSSALCTAMLDWADSKGIGFSSVISVGEG--LDVDFGEILDYLVADTFTQGI 211 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 ++ +A +F+ R KP+V +G+ + H+ ++ A+ Sbjct: 212 LLHVHHI----HDARRFISALRAAARTKPVVVIKSGRYEDDVTGLTHSSNLV----ESAD 263 Query: 270 DKINAMKEAGICIAPSPARIGRSLVELLGS 299 A+ AG+ S +++ + ++L + Sbjct: 264 VFDAALSRAGVLRVGSISQL-FTAAKVLAA 292 >gi|323976202|gb|EGB71295.1| FdrA protein [Escherichia coli TW10509] Length = 515 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 102/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEHG-----LQFARGTKEAALKAVMLCGVK 315 >gi|120598980|ref|YP_963554.1| CoA-binding domain-containing protein [Shewanella sp. W3-18-1] gi|146292935|ref|YP_001183359.1| CoA-binding domain-containing protein [Shewanella putrefaciens CN-32] gi|120559073|gb|ABM25000.1| CoA-binding domain protein [Shewanella sp. W3-18-1] gi|145564625|gb|ABP75560.1| CoA-binding domain protein [Shewanella putrefaciens CN-32] Length = 899 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 49/301 (16%), Positives = 106/301 (35%), Gaps = 29/301 (9%) Query: 7 KNTKVLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 K T V + G + +AG + + + + + PK + V + + Sbjct: 11 KPTSVAIIGASNTEKRAGNVLMKNLLSSGFSGPIMPVTPK------YRAVMGVLAYPNIE 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------VKAR 116 + + +VI + + + + + G+ Sbjct: 65 ALPIKP--DLAVICTRACRVPAIVETLAQFGCKVAIIMASGMAQEFNEEGVSLLELTMQH 122 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ R++GPN G+L P + + G + +S+S + + + +G+G Sbjct: 123 AKRYGMRILGPNSLGMLLPPLGLNASLAHASALPGKIAFVSQSAAICTTVLDWANNKGIG 182 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+ + +G F ++L+ D T +I++ + E FL R Sbjct: 183 FSSFISLG--DATDINFDELLDYLGRDSRTSAIMLYIDSVN----EKRHFLSAARAASRN 236 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVE 295 KPI+ +G++ R A + +GG GG + A + AG+ + ++ Sbjct: 237 KPILVIKSGRSPEGAR----AAKLHTGGVGGNDAVYEAAFRRAGMLRVNDLIELFAAVES 292 Query: 296 L 296 L Sbjct: 293 L 293 >gi|254391073|ref|ZP_05006281.1| acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064] gi|197704768|gb|EDY50580.1| acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064] Length = 650 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 94/258 (36%), Gaps = 26/258 (10%) Query: 43 KKGSTYWTGGNVNVPVFTTVAEAKERTA--ANASVIYVPPSGAGDAIIESIEAEIPLIVC 100 G T G VP F +VAE T + +V+ VP +A+ + E + +V Sbjct: 251 GGGRTEVEG----VPAFRSVAEIAAATGEAVDLAVVAVPVERVPEAVADCGEHGVRGLVV 306 Query: 101 ITEGIPVLDM------VRVKARLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGS 152 +T G + R R+IGPN GI++ + G Sbjct: 307 LTAGYAESGAEGRRRQRELVRRARSYGMRIIGPNSLGIISTADAVRLNASLAPGSPAPGR 366 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 +G+ ++SG + + + + G G ST + G D L+ + D T+ ++M Sbjct: 367 IGLFTQSGAIGIALLSELHRRGAGLSTFISSGNRA--DVSGNDFLQYWYDDPDTDVVLMY 424 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 E G+ +F + + KP+V + + A + + Sbjct: 425 LESIGNP----RKFTRLARRTAAVKPLVVVKGARHSGSEPPGHAVPATR-----IPDAAV 475 Query: 273 NA-MKEAGICIAPSPARI 289 A +++AG+ + + Sbjct: 476 GALLRQAGVIRVDTVTEL 493 >gi|332295195|ref|YP_004437118.1| CoA-binding domain protein [Thermodesulfobium narugense DSM 14796] gi|332178298|gb|AEE13987.1| CoA-binding domain protein [Thermodesulfobium narugense DSM 14796] Length = 711 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 111/298 (37%), Gaps = 26/298 (8%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + K G+ IL G + P + + + + ++ + E Sbjct: 27 VAVLGASRKPGSV--GYTILENLLDFKGQVFPINPNAT---EILGMRAYASLQDLFE--P 79 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----RVKARLEKSSSRLIG 126 + ++I VP + ++ A V +T G + ++ K S R+IG Sbjct: 80 IDLAIISVPREIVPIVLEDAGRAGCLGAVIVTSGFKEVGRKDLEDQLLEIARKYSMRIIG 139 Query: 127 PNCPGILTPDSCKIGIMPGSI----FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 PNC GI S G++ LS+SG + + E +G S + Sbjct: 140 PNCLGIYDAKSRLDTSFLSKQKQARPGPGNIAFLSQSGAFLAAIMDWAASEKIGISKGIS 199 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 G +D+++ + D+ TE I + E +E F + + +KKPI+ Sbjct: 200 YGNK--VDVNELDLIDYLIEDDDTEVICLYIE----GVDEPRVFFEKASIASKKKPILIM 253 Query: 243 VAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 +G T + H G++ G +A K+AG+ + + + L+ S Sbjct: 254 KSGLTEEGTKAAASHTGSMAGSGLL----FKSACKQAGLIMVKDYRELFNAAKALVKS 307 >gi|18977457|ref|NP_578814.1| hypothetical protein PF1085 [Pyrococcus furiosus DSM 3638] gi|18893154|gb|AAL81209.1| hypothetical protein PF1085 [Pyrococcus furiosus DSM 3638] Length = 442 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 97/260 (37%), Gaps = 22/260 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK G G N+ + K + S+I +P + I ++ Sbjct: 40 PVNPKGGEVEVAGKKFNI-------KEKLDEPVDVSIIAIPAKLVPELIR-GLKGLTKGA 91 Query: 99 VCITEGIPVLDMVRV----KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 V I+ G + V + +++ R+IGPNC GI + G + G + Sbjct: 92 VVISAGFSEVGNVELEKELIKAAKEAGIRVIGPNCAGIFGVHAKFYGSFEVRV-NPGGLA 150 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++S+SG A+ ++EG+G S V G + D L F DE T I + E Sbjct: 151 LISQSGAFGGAALAMGNEEGIGFSAFVSYGNAA--DLDESDFLRFFADDENTRVIGLYIE 208 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 ++ +FL KKP++ AGK+ R ++ G E A Sbjct: 209 ----GVKDGRKFLDALRYAASKKPVIILKAGKSRAGARAAASHTGSLA---GSYEIYRAA 261 Query: 275 MKEAGICIAPSPARIGRSLV 294 ++AG + + Sbjct: 262 FRQAGAIEVEEMEELFDAAK 281 >gi|24373676|ref|NP_717719.1| acetyltransferase [Shewanella oneidensis MR-1] gi|24348029|gb|AAN55163.1|AE015653_4 acetyltransferase, GNAT family [Shewanella oneidensis MR-1] Length = 903 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 103/300 (34%), Gaps = 27/300 (9%) Query: 7 KNTKVLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 K T V + G + +AG + + + + + PK + V + + Sbjct: 11 KPTSVAIIGASNSEKRAGNVLMKNLLSSGFSGPIMPVTPK------YRAVMGVLAYPNIE 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------VKAR 116 + + +VI S + + + + + G+ Sbjct: 65 ALPIKP--DLAVICTRASRVPAIVETLAQFGCKVAIIMASGMAQEVNDDGVSLLDLAMQH 122 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ R++GPN GIL P + + G + +S+S + + + +G+G Sbjct: 123 AKRYGMRILGPNSLGILLPPLGLNASLAHASALSGKIAFVSQSAAICTTVLDWANNKGIG 182 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+ + +G F ++L+ D T +I++ + E FL R Sbjct: 183 FSSFISLGDG--TDINFDELLDYLGRDSRTSAIMLYIDSVN----EKRHFLSAARAASRN 236 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KPI+ +G++A R I G E A + AG+ + ++ L Sbjct: 237 KPILVIKSGRSAEGVRAAKQHTGGIGGNDAVYE---AAFRRAGMLRVNDLIELFAAVESL 293 >gi|27983596|gb|AAM94652.1| acetyl-CoA synthetase [Spironucleus barkhanus] Length = 710 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 54/302 (17%), Positives = 104/302 (34%), Gaps = 23/302 (7%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 T + V G + AG + G ++P + + Sbjct: 3 FFTNPTSIAVIGASSAAGKVGYTVVDNIKTSGYTGKVYPINPK---APEINGFKAYPNIT 59 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARL 117 E +V +P E + + V I+ G + ++ A Sbjct: 60 ACPE--TPELAVFVIPAKHCLATAEECGQKGVRGCVIISAGFKEVGGDGIELEQKLVAIG 117 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 +K R++GPN G+ TP RKG + LS+SG + + + +G Sbjct: 118 KKYDMRIVGPNVLGVSTP--SFNCTFASRHPRKGPIAFLSQSGAMLTSILDWSFANNIGF 175 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S + +G +++E D+ T+ I++ E + + FL+ + RKK Sbjct: 176 SNFISLGNK--CDVHETELIEEVCEDDNTKIILLYLE----SIVDGPAFLERVSVASRKK 229 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 PI+ +G + ++G + A +AG+ A + + + SL L Sbjct: 230 PIIILKSGTSLAGAAAASSHTGALAGNDIAFDL---AFAQAGVIRAKTMSEL-FSLARLF 285 Query: 298 GS 299 + Sbjct: 286 SN 287 >gi|126665977|ref|ZP_01736957.1| Acyl-CoA synthetase (NDP forming) [Marinobacter sp. ELB17] gi|126629299|gb|EAZ99916.1| Acyl-CoA synthetase (NDP forming) [Marinobacter sp. ELB17] Length = 914 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 81/233 (34%), Gaps = 16/233 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD-------MVRVKARLEKSSSR 123 ++I PP I +A + +T G+ M V+ +S R Sbjct: 71 PELAIICTPPKTVPKMIRRLGKAGARTAIVMTGGMSRSHSKTGRPLMYSVRDAARESGIR 130 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPN G++ P G V + +SGT+ + G+G S + + Sbjct: 131 VLGPNTIGLMVPARKLNATYAHMGAIPGRVAFVGQSGTIASAVLDWAFARGVGFSYFLTL 190 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G + D+++ D T +I++ E +F+ R KP++ Sbjct: 191 GDG--MDIDHDDLIDYLAQDTRTRAILLHLENV----PNPRRFMSSVRVASRTKPVIALK 244 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +G+ + A I E +K AG+ ++ +L L Sbjct: 245 SGRVPESEWFVHELPAGIKHSDPIYE---AMLKRAGVLRVDGLGQMFDALETL 294 >gi|34499131|ref|NP_903346.1| acetyl-CoA synthetase [Chromobacterium violaceum ATCC 12472] gi|34104982|gb|AAQ61338.1| probable acetyl-CoA synthetase [Chromobacterium violaceum ATCC 12472] Length = 891 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 117/301 (38%), Gaps = 22/301 (7%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 L T V V G + + G+ + G + P + GG +P +V Sbjct: 9 LFSPRT-VAVVGASDRPGSIGQAVFANLLASSFQGKLFPVNLNHKVVGG---MPAVASVR 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCI-----TEGIPVLDMVRVKARLE 118 + E + +V+ + + + + ++ +E + + ++ Sbjct: 65 QIDE--PVDLAVVVTAIRSLPAVVKDCGKKGVKAVLLAKEFSDSEQLEQELINEAQSIAR 122 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R++GPN G++ P + R G++ ++S S L + + +G S Sbjct: 123 HFGVRILGPNVLGLMRPVAGFNASNYSGKVRPGNLALVSESSALCAAMLDWADSKEIGFS 182 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 + + +GG F ++L+ +AD AT+ I++ +A +F+ R KP Sbjct: 183 SVISLGGA--LDVGFGEILDYLVADNATQGILLHVHHI----HDARRFMSALRAAARTKP 236 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V +G+ + HA +++ G + A+ AG+ S A++ + ++L Sbjct: 237 VVVIKSGRFENDASGLTHASNLVASG----DAFDAALARAGVLRVSSIAQL-FTAAKVLA 291 Query: 299 S 299 + Sbjct: 292 A 292 >gi|319426536|gb|ADV54610.1| CoA-binding domain protein [Shewanella putrefaciens 200] Length = 899 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 49/301 (16%), Positives = 106/301 (35%), Gaps = 29/301 (9%) Query: 7 KNTKVLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 K T V + G + +AG + + + + + PK + V + + Sbjct: 11 KPTSVAIIGASNTEKRAGNVLMKNLLSSGFSGPIMPVTPK------YRAVMGVLAYPNIE 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------VKAR 116 + + +VI + + + + + G+ Sbjct: 65 ALPIKP--DLAVICTRACRVPAIVETLAQFGCKVAIIMASGMAQEFNEEGVSLLELTMQH 122 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ R++GPN G+L P + + G + +S+S + + + +G+G Sbjct: 123 AKRYGMRILGPNSLGMLLPPLGLNASLAHASALPGKIAFVSQSAAICTTVLDWANNKGIG 182 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S+ + +G F ++L+ D T +I++ + E FL R Sbjct: 183 FSSFISLG--DATDINFDELLDYLGRDSRTSAIMLYIDSVN----EKRHFLSAARAASRN 236 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVE 295 KPI+ +G++ R A + +GG GG + A + AG+ + ++ Sbjct: 237 KPILVIKSGRSPEGAR----AAKLHTGGVGGNDAVYEAAFRRAGMLRVNDLIELFAAVES 292 Query: 296 L 296 L Sbjct: 293 L 293 >gi|315287711|gb|EFU47114.1| bacterial FdrA protein [Escherichia coli MS 110-3] Length = 515 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 52/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + L+GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLLMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|144899932|emb|CAM76796.1| GCN5-related N-acetyltransferase:CoA-binding [Magnetospirillum gryphiswaldense MSR-1] Length = 907 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 99/294 (33%), Gaps = 23/294 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + KA + Q G I P G + +A E Sbjct: 15 VAVIGASTKANSPGAVVMRNLIQGNFQGPIMPVGTEKSICGVLA----YPDIASLPEAP- 69 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP--------VLDMVRVKARLEKSSS 122 + +++ P + E +T G+ + V+A + Sbjct: 70 -DLALVCSPAPEMVATMRALGEKGAKAACIMTAGLQHSADSSSGLSVFDSVRAEAKIHGI 128 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPN G+L P I G + +S+SG L + +G+G S + Sbjct: 129 RVLGPNSMGMLVPGIGLNASFAPDIAPAGKIAFVSQSGALCSAVLDWACAKGIGFSHFIH 188 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 G +F +L+ +D T +I++ + +E F+ R KPI+ Sbjct: 189 TGES--MDVDFGHILDYLGSDPHTRAILLYLQTV----DERRNFMSAARAAARNKPILAI 242 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 AG++ ++G + A++ +G+ I ++ L Sbjct: 243 KAGRSTEGALAASSHTGALAGSDLVFD---AAIRRSGMLRVQDIEEIFGAVETL 293 >gi|323967628|gb|EGB63041.1| acetyltransferase [Escherichia coli M863] gi|327252294|gb|EGE63966.1| acetyltransferase family protein [Escherichia coli STEC_7v] Length = 886 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 101/279 (36%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ PV ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PVSQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|299132942|ref|ZP_07026137.1| CoA-binding domain protein [Afipia sp. 1NLS2] gi|298593079|gb|EFI53279.1| CoA-binding domain protein [Afipia sp. 1NLS2] Length = 711 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 101/276 (36%), Gaps = 21/276 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + I + +HP K + + +V + + +V Sbjct: 274 GKIGNSVMKNLINGGYKGEIYPVHP-KAAEILGHK-----AYKSVKDIP--GVVDVAVFA 325 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEKSSSRLIGPNCPGIL 133 +P A+ E E +IP V I G + + +K RL+GPN G Sbjct: 326 IPAKFVAGALTECGEKKIPGAVLIPSGFAEANEPELQEEIVKIGQKYDIRLMGPNIYGFY 385 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 + + KGS + S+SG + + + +G S VG+G + Sbjct: 386 YTPANLCATFCTAFDVKGSAALSSQSGGIGMAIIGFSRSAKMGVSAIVGLGNKSDIDED- 444 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 D+L F D+ T I M E ++ F + +KKP++ G+T+ + Sbjct: 445 -DLLAFFEQDKNTNVIAMHCEDL----KDGRAFANAAKRVSKKKPVIVLKGGRTSAGAKA 499 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 ++G ED K++G+ A S ++ Sbjct: 500 AASHTGALAGNDKIYEDV---FKQSGVIRARSLRQL 532 >gi|315502624|ref|YP_004081511.1| CoA-binding domain protein [Micromonospora sp. L5] gi|315409243|gb|ADU07360.1| CoA-binding domain protein [Micromonospora sp. L5] Length = 851 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 25/243 (10%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------L 108 +P + + A+A + + +V+ VPP D + ++ A +V I+ G Sbjct: 241 GLPAYPSAADAGQ--DVDLAVVAVPPDAVTDVVHDAARAGAHGLVVISAGFAESGPAGAA 298 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + + R++GPNC G+ D + + G VG+ S+SG Sbjct: 299 AQRALVRAAHLAGMRVVGPNCLGVANTDPAVRLNATLAPVLPAAGRVGVFSQSGAFGVAL 358 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + S+ GLG S+ V G D+L+ + D AT+ I + E G+ +F Sbjct: 359 LAEASRRGLGLSSFVSAGNRA--DVSGNDLLQYWQDDPATDVITLYLETFGNP----RKF 412 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 + + GR+KP+V A PPG G A A+ A ++G+ + Sbjct: 413 ARLARRIGRRKPVVAL-ASLARPPGV--GDAPAL------DAAAVSALFAQSGVIRVDTV 463 Query: 287 ARI 289 + + Sbjct: 464 SEL 466 >gi|90417805|ref|ZP_01225717.1| acetyltransferase, GNAT family [Aurantimonas manganoxydans SI85-9A1] gi|90337477|gb|EAS51128.1| acetyltransferase, GNAT family [Aurantimonas manganoxydans SI85-9A1] Length = 897 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 91/244 (37%), Gaps = 18/244 (7%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL-----DMVRV 113 +V E + +VI P I E + I+ G+ +V Sbjct: 60 HRSVETLPEVP--DLAVIATPARTVPGIISALGERGCCAAIVISAGLGEAVDGATLRQQV 117 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 R++GPNC G+++P + + R G + ++S+SG + + + Sbjct: 118 LDAARPHLMRIVGPNCLGLISPAAGINASFAHLMPRAGDIALVSQSGAMLTSVIDWADER 177 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G S + +G + +F D+L+ D T SI++ E EA +FL Sbjct: 178 RIGFSHLLSVG--DMSDVDFGDMLDYLATDRTTRSILLYVENVT----EAQKFLSAARLA 231 Query: 234 GRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 R P++ AG++A R H GA+ G A + AGI + + Sbjct: 232 ARSMPVLVIKAGRSAAGARAAQSHTGALA----GSDVVYDAAFRRAGILRVREIEELFEA 287 Query: 293 LVEL 296 L Sbjct: 288 AATL 291 >gi|218780519|ref|YP_002431837.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218761903|gb|ACL04369.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 729 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 99/258 (38%), Gaps = 20/258 (7%) Query: 50 TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 G + V+ +V+E + + I +P + E I + IT G Sbjct: 288 GGEILGRKVYKSVSEIP--GPVDMACITIPAAHVMGLFPEFQAKGIRYALLITSGFGETG 345 Query: 110 ------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLT 163 + A+ + ++GPN G+ P + G+ +S+SG + Sbjct: 346 PEGKVLEKELVAKAREHDIIILGPNTMGLNNPHNTFYCTGTHIRPEPGATAFVSQSGNMG 405 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 + + ++G+G G G + + E D +E F DE T ++V+ E + Sbjct: 406 GQLMGFALEQGIGLRAFCGSGNEAMISIE--DSMEAFEVDELTRTVVLYLESV----KNG 459 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +F + + G+ KP++ G+T G+ H GA+ S + A K+AG+ Sbjct: 460 RRFYESARRLGKMKPVIVLKGGRTEAGGKAAASHTGAMASN----VKVFDAACKQAGVVS 515 Query: 283 APSPARIGRSLVELLGSL 300 P + L + +L Sbjct: 516 VEKPMDLLD-LSAVFSAL 532 >gi|145588727|ref|YP_001155324.1| GCN5-related N-acetyltransferase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047133|gb|ABP33760.1| GCN5-related N-acetyltransferase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 895 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 86/223 (38%), Gaps = 11/223 (4%) Query: 73 ASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGI 132 ++I +P A+ + + V I+ GI +K + +L+GPN G Sbjct: 68 LAIIALPHHELVAALELAGRLKHQSAVLISTGIDKSTSDELKDLAKHYGIQLLGPNTMGF 127 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 P + G + G + ++++SG LT + G+G S +G + + Sbjct: 128 QRPYLHLNASVMGDLASPGPLALIAQSGALTSAMLDWAKTNGVGFSFVASVGQNA--SVD 185 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG-KTAPPG 251 ++L+ D T+SIV+ E S+ +F+ KP++ +G K A Sbjct: 186 IAELLDFLGNDAKTQSIVLYLEGITSS----RKFMSALRAAANIKPVIVLKSGHKPAGNE 241 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 H G+++ G A++ AG S + + Sbjct: 242 AAKTHCGSIV----GTDAVFDAAIRRAGAVRVKSFVDLFSAAK 280 >gi|21226460|ref|NP_632382.1| Acetyl-CoA synthetase subunit alpha [Methanosarcina mazei Go1] gi|20904723|gb|AAM30054.1| Acetyl-CoA synthetase, alpha subunit [Methanosarcina mazei Go1] Length = 468 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 96/265 (36%), Gaps = 25/265 (9%) Query: 35 QVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE 94 G I+P + ++ A + + ++ +P D + E Sbjct: 50 NFKGKIYPVNPGYE---EIEGLKCYS--APGEINNRIDIAIFAIPARAVLDTLKE-PAGN 103 Query: 95 IPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTP----DSCKIGIMP 144 I V ++ G + +K L++ R +GPNC GI D+ I Sbjct: 104 IKGAVIVSSGFREMGPGGMKMEDELRDLLKEKGIRAMGPNCLGIYDTVSNVDTFFIEREK 163 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 + V +L++SG+ + + + EG G + V G D LE DE Sbjct: 164 IERPVRDGVSVLTQSGSFAAMIMDELANEGAGVARVVSYGNK--VDVNESDCLEFLAEDE 221 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 AT+++ + E + +FLK + +KKP+V GK P R IS Sbjct: 222 ATKAVALYIESVS----DGRKFLKAASGCVKKKPVVALKVGKREPGARAASSHTGAIS-- 275 Query: 265 KGGAEDKINAMKEAGICIAPSPARI 289 G E A ++ GI S + Sbjct: 276 -GMYEAYEAAFRKTGIIEVASYEEL 299 >gi|302349008|ref|YP_003816646.1| Acetyl coenzym A synthetase (ADP-forming) [Acidilobus saccharovorans 345-15] gi|302329420|gb|ADL19615.1| Acetyl coenzym A synthetase (ADP-forming) [Acidilobus saccharovorans 345-15] Length = 712 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 84/241 (34%), Gaps = 19/241 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR-------LEKSSS 122 + V+ V + + ++ + + + + G ++ S Sbjct: 68 DVDLVVVAVNAALTPSVLEDAGKKGVRGAIIFSGGFAETGTEEGIRLQEEVVSIAKRYSM 127 Query: 123 RLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R++GPNC G+ D+ + R G + I+S+SG L + + +G S Sbjct: 128 RILGPNCIGVYNSANGVDTFFLPEERMRRPRPGPIAIISQSGALLATLMDWAAANNVGIS 187 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 A+ G + ID L + I+M E E K G +KP Sbjct: 188 KAINFGNK--VDIDEIDSLNYLAGASDVKVILMYLEGVTKGRELVDAIRK--VTYGSRKP 243 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 ++ G+TA R A I+ G + AM EA + + + ++L Sbjct: 244 VLVLKGGRTAEGSRATLSHTASIA---GSYDVFKEAMSEANAIVVEDLQEMFDA-AKVLS 299 Query: 299 S 299 S Sbjct: 300 S 300 >gi|124027867|ref|YP_001013187.1| hypothetical protein Hbut_0995 [Hyperthermus butylicus DSM 5456] gi|123978561|gb|ABM80842.1| universally conserved protein [Hyperthermus butylicus DSM 5456] Length = 476 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 112/297 (37%), Gaps = 25/297 (8%) Query: 11 VLVQGLTGKAGTFHTEQAILYC-QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT 69 V V G + K G +LY + G I+P + + + + T+ + + Sbjct: 21 VAVIGASRKPGKV--GYMVLYNLKNSYEGPIYPVNPN---ADEILGLKAYPTIMDVPD-- 73 Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV---LDMVRVKARL---EKSSSR 123 + +V+ VP D + ++ + ++ I+ G + K L K R Sbjct: 74 PVDLAVVTVPAKMVPDVVDQAGRRGVRAVIVISAGFREVGGEGVELEKRLLEVVRKHGIR 133 Query: 124 LIGPNCPGILTPDSCKIGIMPGSI----FRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GPNC G+ +P + KG + +S+SG L + G S Sbjct: 134 MLGPNCLGVYSPSTGINATFLDPEKQGLPGKGPIAFISQSGALGAALLDWLDANQFGISK 193 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + IG + D+L D T+SI M I G A E +F + + +KP+ Sbjct: 194 FISIGNKA--DIDEADLLAYLRKDPETKSIAMY--IEGVAPGEGGRFRRALEETTHEKPV 249 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 V +G+TA R ++ G + K+ G+ A A++ + L Sbjct: 250 VILKSGRTAAGARAASSHTGSLA---GSYQLYETIFKQTGVIPAYDTAQLFEMALAL 303 >gi|124028190|ref|YP_001013510.1| hypothetical protein Hbut_1336 [Hyperthermus butylicus DSM 5456] gi|123978884|gb|ABM81165.1| universally conserved protein [Hyperthermus butylicus DSM 5456] Length = 477 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 84/216 (38%), Gaps = 13/216 (6%) Query: 85 DAIIESIEAEIPLIVCITEGIPVLDMVRVKAR----LEKSSSRLIGPNCPGILTPDSCKI 140 + I ++ +A V I G + V ++ + K R++GPN G + S Sbjct: 82 EVIEDAGKAGAKFAVIIASGFREVGNVELEKKVVETARKYGIRVLGPNVFGYVYTPSRIN 141 Query: 141 GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 G V +++SG L + T EG+G S + +G + D LE F Sbjct: 142 ATFGPRDVIPGGVAFITQSGALGIALMGTTIMEGIGVSAIISLGNKA--DLDDADFLEFF 199 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAV 260 D T +++ E + +F++ ++ KKPIV +G+T R Sbjct: 200 EKDPNTNIVLIYMEGVS----DGRKFVEVASRVTLKKPIVVIKSGRTEAGARAAASHTGS 255 Query: 261 ISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++G E A K++GI A S + L Sbjct: 256 LAGNIAFYE---AAFKQSGILFAKSIEEAFDWVKAL 288 >gi|302866068|ref|YP_003834705.1| CoA-binding domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|302568927|gb|ADL45129.1| CoA-binding domain protein [Micromonospora aurantiaca ATCC 27029] Length = 851 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 25/243 (10%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------L 108 +P + + A+A + + +V+ VPP D + ++ A +V I+ G Sbjct: 241 GLPAYPSAADAGQ--DVDLAVVAVPPDAVTDVVHDAARAGAHGLVVISAGFAESGPAGAA 298 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + + R++GPNC G+ D + + G VG+ S+SG Sbjct: 299 AQRALVRAAHLAGMRVVGPNCLGVANTDPAVRLNATLAPVLPAAGRVGVFSQSGAFGVAL 358 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + S+ GLG S+ V G D+L+ + D AT+ I + E G+ +F Sbjct: 359 LAEASRRGLGLSSFVSAGNRA--DVSGNDLLQYWQDDPATDVITLYLETFGNP----RKF 412 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 + + GR+KP+V A PPG G A A+ A ++G+ + Sbjct: 413 ARLARRIGRRKPVVAL-ASLARPPGV--GDAPAL------DAAAVSALFAQSGVIRVDTV 463 Query: 287 ARI 289 + + Sbjct: 464 SEL 466 >gi|119719515|ref|YP_920010.1| CoA-binding domain-containing protein [Thermofilum pendens Hrk 5] gi|119524635|gb|ABL78007.1| CoA-binding domain protein [Thermofilum pendens Hrk 5] Length = 704 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 54/242 (22%), Positives = 98/242 (40%), Gaps = 15/242 (6%) Query: 52 GNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV 111 + + + +V+E + + V+ VP + ++ + + IT G + V Sbjct: 54 EILGLKCYKSVSEIPYQ--VDLVVVAVPAPAVPGVLEDAGRKGVKAVAVITSGFKEIGNV 111 Query: 112 RVKAR----LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 ++ R + RL+GPN GI + + G + +++SG L V Sbjct: 112 DLEQRIASIAKNYGMRLLGPNIVGICDTVKRVNASFCQGLPKPGEIAFITQSGALGIALV 171 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 T +G+G S V IG + D++E F D+ T+ I E + +FL Sbjct: 172 GWTKLKGIGLSDLVSIGNKA--DVDETDLVEFFGEDQYTKVITAYLEGVS----DGRRFL 225 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 + + R+KPI+ AG+ RT+G + G A K++GI +A S Sbjct: 226 EAARRVARRKPIIVLKAGR---GVRTIGAIKSHTGSLAGSFAAYEAAFKQSGILLARSFV 282 Query: 288 RI 289 + Sbjct: 283 EL 284 >gi|224369288|ref|YP_002603452.1| hypothetical protein HRM2_21900 [Desulfobacterium autotrophicum HRM2] gi|223692005|gb|ACN15288.1| conserved hypothetical protein [Desulfobacterium autotrophicum HRM2] Length = 487 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 93/269 (34%), Gaps = 27/269 (10%) Query: 28 AILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAI 87 A+ Y +HPK F V++ E + + I +P + + Sbjct: 42 AMGYAGKIY--PVHPK------DREIKGFQAFQRVSDLPEIP--DLAYIVLPTPVVVETL 91 Query: 88 IESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCKIG 141 + I V ++ G + + A EK R +GPNC G++ Sbjct: 92 EACGQLGIRHAVIVSAGFNEVGGQGKQLQSELTAVAEKYGIRFLGPNCIGVINTHLNLNA 151 Query: 142 IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFL 201 +G +G+ S+SG+ + S+ G+G ST IG + + +D + Sbjct: 152 TFLPYEAGRGYIGMASQSGSFITQMSPHMSRLGMGFSTGFSIGNEAN--VDIVDCMAYLG 209 Query: 202 ADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT-MGHAGAV 260 A T I + E + F+ KKPIV F G + R H GA+ Sbjct: 210 ACPNTRVIALYIE----SIRRGRAFIDTARAIVPKKPIVAFYVGGSDEGRRAGFSHTGAL 265 Query: 261 ISGGKGGAEDKINAMKEAGICIAPSPARI 289 +++G+ A S + Sbjct: 266 AGPDPL----YNGVFRQSGVIRASSIEEL 290 >gi|224367560|ref|YP_002601723.1| SucC2 [Desulfobacterium autotrophicum HRM2] gi|223690276|gb|ACN13559.1| SucC2 [Desulfobacterium autotrophicum HRM2] Length = 709 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 103/258 (39%), Gaps = 25/258 (9%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P+ + +P + ++ + + ++I P + E E ++ Sbjct: 42 PVNPR------EDSVLGIPCYDSITSIDQE--VDLALITTPAKTIPALLKECGEKKVAGA 93 Query: 99 VCITEGIPVLDM------VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 V + G L V ++S R+IGPN G++ S ++ +G Sbjct: 94 VIVAGGFRELGTEGKALEALVVETAKESGVRIIGPNTSGMINMKSNMN-LVGIKNAPRGG 152 Query: 153 VGILSRSGTLT-YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 + ++ +SG + ++ G + +G+G + +F + LE D T+SI+M Sbjct: 153 IALICQSGNMALTLITEAMIRKHEGFTYYIGVGNEA--DIKFHEYLEFLRNDPETKSILM 210 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDK 271 E +FL+ + +KKPIV +G++A R+ G ++ G +E Sbjct: 211 YVEGMSQG----RKFLQQAYETTKKKPIVLLKSGRSATGKRSAGSHTGSLA---GMSEVA 263 Query: 272 INAMKEAGICIAPSPARI 289 A AGI + + + Sbjct: 264 NAAYGRAGITVIENSDEL 281 >gi|116748154|ref|YP_844841.1| CoA-binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116697218|gb|ABK16406.1| CoA-binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 682 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 107/287 (37%), Gaps = 34/287 (11%) Query: 11 VLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 V+V G++ G G + + + + P KG ++ + + + + Sbjct: 10 VVVVGVSNAPGNLGRLMAANLMEFHFQGNIFLVGP-KGGSFLGHK-----IHARITDVDD 63 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR------VKARLEKSS 121 + + I VP + + + E IP ++ + G L R V+ LE Sbjct: 64 A--IDLATILVPAPAVPEVLRQCGEKGIPRVIVQSAGFRELGEERLELEGKVRDLLEHYR 121 Query: 122 SRLIGPNCPGILTPDSCK-IGIMP-GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R+IGPNC G++ + + P + G + I+S+SG + V E LG S Sbjct: 122 MRMIGPNCLGVINRRTGLAVPFFPLAANVGAGPISIISQSGGVGAMMVNLLEAENLGLSR 181 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 +G D+LE F D TE I+ E + + ++ R KP+ Sbjct: 182 FASVGNK--LDVSENDLLEYFARDPETEMILCYLE----GIADGRKLMR--ITRETPKPV 233 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI--NAMKEAGICIAP 284 + + G A A ++D++ A +++GI Sbjct: 234 IVHKSNTG-----KCGAAIARSHSASLSSDDRVVDAAFRQSGIIRVR 275 >gi|134098360|ref|YP_001104021.1| acetyl-CoA synthetase [Saccharopolyspora erythraea NRRL 2338] gi|291006938|ref|ZP_06564911.1| acetyl-CoA synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133910983|emb|CAM01096.1| possible acetyl-CoA synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 891 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 99/268 (36%), Gaps = 25/268 (9%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 G ++P V + +V + + + +V+ +P +G + + + Sbjct: 233 TADFAGPVYPVNPEHR---SVRGVRAYPSVLDIPD--DVDLAVVAIPAAGVDEVLDACLA 287 Query: 93 AEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMP 144 + +V ++ G R+ R++GPN G++ P + Sbjct: 288 KGVKALVIVSSGFSEAGPDGREIERRMVRAARVHGMRVVGPNALGVVNTDPGYRVNATLA 347 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 + +G G +SG L + ++ GLG ST V G D+L+ + D Sbjct: 348 PRLPGRGRTGFFCQSGALGVAILATAAERGLGLSTFVSAGNRA--DVSGNDLLQYWQTDP 405 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 T+ +++ E G+ +F + + R KPIV +G+ A G A + Sbjct: 406 GTDVVLLYLESFGNP----RKFARLARRLARTKPIVVVKSGRNA---VRPGLAATSVQVD 458 Query: 265 KGGAEDKINAMKEAGICIAPSPARIGRS 292 + + + ++G+ S A + + Sbjct: 459 ETSVQALFD---QSGVIRVESVAEMFDT 483 >gi|217969921|ref|YP_002355155.1| CoA-binding protein [Thauera sp. MZ1T] gi|217507248|gb|ACK54259.1| CoA-binding domain protein [Thauera sp. MZ1T] Length = 886 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 100/279 (35%), Gaps = 19/279 (6%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G G + + ++PK G + P +V + + ++I Sbjct: 26 GSVGRVIFRNLVEGGYRGTLYAVNPK------YGSIQDHPCHRSVEDIGR--PVDLAIIA 77 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 P + + + V I+ R+ ++ RLIGP GI P S Sbjct: 78 TPARMLHSVTAQCGRSGVRNAVIISAS-GNALERRIVETARETRLRLIGPGSLGIARPGS 136 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 + + G + ++S+SG + + +G S+ + +GG ++ + L Sbjct: 137 GINAALTRIAVKPGEIALISQSGAMCSVVLDWALTNDVGFSSVISLGGT--VDIDYGETL 194 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 E + D T I++ + A QF+ R KPI+ AG+ GR+ +A Sbjct: 195 EYLIHDTQTRYILLHVDHI----RNARQFMSALRSAARVKPIILLKAGRH---GRSDNNA 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + G AM+ AG+ + ++ + L Sbjct: 248 ADADNAGLADV-VFDAAMRRAGVVRVQNIDQLFFAAKAL 285 >gi|170289825|ref|YP_001736641.1| Acyl-CoA synthetase (NDP forming) [Candidatus Korarchaeum cryptofilum OPF8] gi|170173905|gb|ACB06958.1| Acyl-CoA synthetase (NDP forming) [Candidatus Korarchaeum cryptofilum OPF8] Length = 464 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 102/274 (37%), Gaps = 19/274 (6%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 K G+ + Y V I+P + + + V++ ++ + +VI V Sbjct: 24 KIGSQILRNLLSYGFKGKVYPINPT------ADELMGLKCYPKVSDVPDK--VDVAVISV 75 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV----KARLEKSSSRLIGPNCPGILT 134 P I + +A + V IT G + + R R++GPN G L Sbjct: 76 PSDKVLGVIDDCGKAGVKFAVVITSGFKEVGNEELEEELVRRAHSYGMRVLGPNIFGYLY 135 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 + G+V +S+SG L + T E +G S+ V +G + Sbjct: 136 APARLNATFGPKDVLSGNVAFISQSGALGIALMGYTVVENIGISSIVSVGNKADLDDVDL 195 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM 254 L+ F D T I++ E G A F+ ++ +KPI+ AG+T R Sbjct: 196 --LDFFDKDPNTGVIMIYLE--GIAPGRGRMFIDVASRVSLRKPIIVIKAGRTEVGARAA 251 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 I+G E A K++GI +A S Sbjct: 252 ASHTGSIAGSVAIYES---AFKQSGILMAKSVED 282 >gi|89093109|ref|ZP_01166060.1| acetyltransferase, GNAT family protein [Oceanospirillum sp. MED92] gi|89082759|gb|EAR61980.1| acetyltransferase, GNAT family protein [Oceanospirillum sp. MED92] Length = 914 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 82/233 (35%), Gaps = 16/233 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD-------MVRVKARLEKSSSR 123 + ++I PP D I + + + +T G+ + D VK + R Sbjct: 71 PDLAIICSPPESVADIIRGLGASMVKAAMILTGGLSIADGDSSQTLRDEVKEAAKPYGIR 130 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GP+C G+L P KG V + +SG L + + + +G S + + Sbjct: 131 ILGPDCMGLLVPGHNMNASYSHVNILKGKVAYVGQSGILGTAMIDWATGQEIGFSHFLTL 190 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G + V++ D T +I++ + A FL R K ++ Sbjct: 191 GDGA--DVDMPSVIDYLAQDPYTHAILLQLN---RVDGSARDFLSAVRSASRNKLVLVLK 245 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 T ++ I + A++ AG+ + + +L L Sbjct: 246 N-DTFVGEKSGTELAPGIHDDDQVYD---AALRRAGVVRVETSDELFNALETL 294 >gi|307941775|ref|ZP_07657130.1| CoA-binding domain-containing protein [Roseibium sp. TrichSKD4] gi|307775383|gb|EFO34589.1| CoA-binding domain-containing protein [Roseibium sp. TrichSKD4] Length = 910 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 84/236 (35%), Gaps = 15/236 (6%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLI 125 + + P I + E ++ + G P + + + RL Sbjct: 69 HDIDLVIYLGPQLRVPQTIRDLCEKGTRAVLIPSPGFETWPEALLQECREAARPKAIRLT 128 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 GP G+ +P S ++ GS G + +SRSG + + Q G S+ V +G Sbjct: 129 GPGSLGVASPGSNFNALLSGSDPEAGDIAFISRSGAILNATLSWAQQNKTGFSSVVSLGT 188 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 + D+++ F D T SIV+ E + +FL R KP++ G Sbjct: 189 R--LDVDIGDLIDYFAQDYKTRSIVLHMEGISAP----RKFLSAARAAARSKPVIVIRTG 242 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARIGRSLVELLGSL 300 ++ +G +G + +A + G+ + ++ E L L Sbjct: 243 RSRDTF----GSGRTHAGKLASPDWVYDAVFRRTGMMRVSDLDEMFEAV-ETLSRL 293 >gi|283832024|ref|ZP_06351765.1| acetyltransferase, GNAT family [Citrobacter youngae ATCC 29220] gi|291071641|gb|EFE09750.1| acetyltransferase, GNAT family [Citrobacter youngae ATCC 29220] Length = 886 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 102/280 (36%), Gaps = 27/280 (9%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPNINSLP-----FSPDLAVLC 76 Query: 78 VPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD 136 S A++E++ E + ++ P + A + RL+GPN G+L P Sbjct: 77 TNASRNL-ALLEALGEKGCKTCIILSA--PAAQHADLLACASRYKIRLLGPNSLGLLAPW 133 Query: 137 SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 ++G + +S+S ++ + Q +G S + +G + ++ Sbjct: 134 QGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--EL 191 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGH 256 L+ D T +I++ E +A +F+ R KPI+ +G++ P + + Sbjct: 192 LDYLARDSKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLR 246 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 247 TSAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|91209396|ref|YP_539382.1| hypothetical protein UTI89_C0350 [Escherichia coli UTI89] gi|117622601|ref|YP_851514.1| acyl-CoA synthetase [Escherichia coli APEC O1] gi|218557246|ref|YP_002390159.1| enzyme with acyl-CoA domain [Escherichia coli S88] gi|237707681|ref|ZP_04538162.1| acyl-CoA synthetase [Escherichia sp. 3_2_53FAA] gi|91070970|gb|ABE05851.1| hypothetical protein YahF [Escherichia coli UTI89] gi|115511725|gb|ABI99799.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli APEC O1] gi|218364015|emb|CAR01680.1| putative enzyme with acyl-CoA domain [Escherichia coli S88] gi|226898891|gb|EEH85150.1| acyl-CoA synthetase [Escherichia sp. 3_2_53FAA] gi|294491061|gb|ADE89817.1| bacterial FdrA protein [Escherichia coli IHE3034] gi|307628195|gb|ADN72499.1| putative enzyme with acyl-CoA domain [Escherichia coli UM146] gi|323953052|gb|EGB48920.1| FdrA protein [Escherichia coli H252] gi|323958750|gb|EGB54451.1| FdrA protein [Escherichia coli H263] Length = 515 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|111020602|ref|YP_703574.1| succinate--CoA ligase (ADP-forming) [Rhodococcus jostii RHA1] gi|110820132|gb|ABG95416.1| probable succinate--CoA ligase (ADP-forming) [Rhodococcus jostii RHA1] Length = 690 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 90/236 (38%), Gaps = 18/236 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSR 123 + VI VP G +A+ +++ A IV +T G L RV R+ + + Sbjct: 72 RVDLVVITVPAQGFEEAVDDALAAGATAIVGVTAGFAELGAAGKAVQDRVVERVRAAGAV 131 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPNC G+L + + + G V +LS+SG + E G G S + Sbjct: 132 LLGPNCLGVLDSSTAL--TLASNALPAGRVALLSQSGNMALELSQFLEARGHGFSRFASL 189 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G G D++ + + T+ I + E G + KP++ Sbjct: 190 GNQADLGA--ADLIRSCVEHDDTDLIAVYCEDFGDGRAFVDAAAQASRAG---KPVLLLT 244 Query: 244 AGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G +A R H G++ S A + AG+ SP ++ LLG Sbjct: 245 VGGSAASIRGAQSHTGSLTSDSAVI----DAACRAAGVYRVSSPRQLADVAATLLG 296 >gi|157154800|ref|YP_001461492.1| acyl-CoA synthetase [Escherichia coli E24377A] gi|157076830|gb|ABV16538.1| bacterial FdrA protein [Escherichia coli E24377A] Length = 515 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGF 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|242399812|ref|YP_002995237.1| Acyl-CoA synthetase, subunit alpha [Thermococcus sibiricus MM 739] gi|242266206|gb|ACS90888.1| Acyl-CoA synthetase, subunit alpha [Thermococcus sibiricus MM 739] Length = 448 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 90/240 (37%), Gaps = 19/240 (7%) Query: 37 VGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIP 96 V ++PK G + + E K + ++I +P I E + + Sbjct: 38 VTPVNPKGGEVEVANVRLKI-------EKKLEKNVDVAIIAIPAKFVPPLIDEIGDK-VK 89 Query: 97 LIVCITEGIPVLDMVRV----KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 V I+ G + V + + ++IGPNC GI + G + KG Sbjct: 90 GAVVISAGFSEVGNVDLEKELIEKARNKGVKVIGPNCAGIFGVHANFFGSFEVRV-NKGG 148 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 + ++S+SG A+ ++EG+G S V G D L+ F D+ T+ I + Sbjct: 149 LALISQSGAFGGAALAMGNEEGIGFSAFVSYGNAA--DLTESDFLKYFADDKNTKVIALY 206 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 E ++ +F++ KKP++ AGK+ + ++G Sbjct: 207 IE----GVKDGRKFIEALKYATSKKPVIVLKAGKSKSGSKAAQSHTGSMAGSYEIYRATF 262 >gi|320182091|gb|EFW56995.1| Protein acetyltransferase [Shigella boydii ATCC 9905] Length = 886 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 101/279 (36%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 INASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|15921831|ref|NP_377500.1| hypothetical protein ST1537 [Sulfolobus tokodaii str. 7] gi|15622618|dbj|BAB66609.1| 659aa long conserved hypothetical protein [Sulfolobus tokodaii str. 7] Length = 659 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 101/248 (40%), Gaps = 20/248 (8%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV--- 111 V + +V E + + VI VP + E++E + + IT G + Sbjct: 52 GVKAYKSVKEIPD--PIDMVVITVPREAVPQVMEEAVEKNVKAAIVITAGFKEVGEAELE 109 Query: 112 -RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 +V + K R++GPN GI+TP+ + ++G++ ++ +SG L + Sbjct: 110 DKVISIARKGGIRVLGPNTFGIITPE--FNATFAYTDVKRGNIALVVQSGGLGVYMLNWA 167 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + +G S V +G + +V+E D T +I + E + FL+ Sbjct: 168 QKYRVGISYMVSLGNQA--DVKEYEVIEYLSRDPETRAIFVYLEGVS----DGNSFLETL 221 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + ++KP+V G T+ H G++ G E A++ G + + + Sbjct: 222 PEATKRKPVVFLKGGTTSNGAAAAKTHTGSLA----GSFEVFKAAVRTVGGILVDNLHDM 277 Query: 290 GRSLVELL 297 +L +LL Sbjct: 278 -LNLAKLL 284 >gi|289583123|ref|YP_003481589.1| CoA-binding protein [Natrialba magadii ATCC 43099] gi|289532676|gb|ADD07027.1| CoA-binding domain protein [Natrialba magadii ATCC 43099] Length = 699 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 60/302 (19%), Positives = 109/302 (36%), Gaps = 23/302 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 +S L T V V G T + G + + VG + P S G P Sbjct: 4 LSELFAPET-VGVIGATEREGAV-GRAILENLHQEFVGEVVPINPSHETVLGLEAYP--- 58 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-- 118 + + +V+ VPP + I E E +V IT G + E Sbjct: 59 ---DVASAPPLDLAVVVVPPPAVLETIREIGEVGTQHVVVITAGFAESGGEGARREAELR 115 Query: 119 ----KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + ++GPN G+++ R GS+ +S+SG + +++G Sbjct: 116 EIAAEYDLNVVGPNSLGVMSTPVSMNATFGPESARDGSISFMSQSGAFITAVLDWANEQG 175 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G V +G + D + + D T+ I+ E + +E F++ + Sbjct: 176 IGFQDVVSLGNKTILDET--DFVREWGEDPETDVIIGYLEDIDAGDE----FIRTAREVT 229 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 + PIV +G+T + I+G + E +++AG+ A S + + Sbjct: 230 EETPIVLVKSGRTDAGAQAASSHTGAIAGSERAYE---AGLEQAGVIRASSVQELFDAAR 286 Query: 295 EL 296 L Sbjct: 287 AL 288 >gi|323698665|ref|ZP_08110577.1| CoA-binding domain protein [Desulfovibrio sp. ND132] gi|323458597|gb|EGB14462.1| CoA-binding domain protein [Desulfovibrio desulfuricans ND132] Length = 715 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 91/247 (36%), Gaps = 16/247 (6%) Query: 50 TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---- 105 G P + + + ++I + P + + +E + + ++ G Sbjct: 49 GGEIFGRPTYPDILAVP--GEVDLAIIAIAPKHILPIMEQCVEKGVKCAIVVSTGFGETG 106 Query: 106 PVLDMVRVK--ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLT 163 P + K K + R+ GPNC G + + G + ++ +SG Sbjct: 107 PEGKELERKMLEIARKGNMRVQGPNCMGTYSSAKSMNASI--IDLAPGPMSLVLQSGNFG 164 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG-SAEEE 222 + F LG S IG F D +E DE T+ +++ E +EE+ Sbjct: 165 IDINFNAKSRNLGYSCWATIGNQ--MDMRFHDFVEYIEEDENTKVLLLYMEGLRVESEED 222 Query: 223 AAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +FL+ K + PI G++A R ++G + + A+++AGI Sbjct: 223 GRKFLEAAKKTAARVPIAAIKIGRSAAGARAAASHTGSLAGSEKIFD---AALRQAGIIR 279 Query: 283 APSPARI 289 SP + Sbjct: 280 VDSPGEL 286 >gi|170767638|ref|ZP_02902091.1| CoA binding domain/acetyltransferase domain protein [Escherichia albertii TW07627] gi|170123972|gb|EDS92903.1| CoA binding domain/acetyltransferase domain protein [Escherichia albertii TW07627] Length = 886 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 100/280 (35%), Gaps = 27/280 (9%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--GNVNVPVFTTVAEAKERTAANASVI 76 +AG + V + P W G + P +++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTP-----TWKAVLGVLAWPDISSLP-----FTPDLAVL 75 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD 136 S + E + ++ P ++ ++ + RL+GPN G+L P Sbjct: 76 CTNASRNLSLLEELGAKGCKTCIILSA--PASQHEELRTCAQRHNMRLLGPNSLGLLAPW 133 Query: 137 SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 ++G + +S+S ++ + Q +G S + +G + ++ Sbjct: 134 QGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--EL 191 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGH 256 L+ D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 192 LDYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLN 246 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 247 TTAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|315300560|gb|EFU59789.1| CoA binding domain protein [Escherichia coli MS 16-3] Length = 886 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P A+ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWP-----DIARLPFTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAW------NAAIQRAGLLRVQDTHELFSAVETL 280 >gi|331658729|ref|ZP_08359673.1| putative CoA binding domain protein [Escherichia coli TA206] gi|331054394|gb|EGI26421.1| putative CoA binding domain protein [Escherichia coli TA206] Length = 886 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P A+ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWP-----DIARLPFTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAW------NAAIQRAGLLRVQDTHELFSAVETL 280 >gi|331671878|ref|ZP_08372674.1| putative oxidoreductase subunit [Escherichia coli TA280] gi|331070867|gb|EGI42226.1| putative oxidoreductase subunit [Escherichia coli TA280] Length = 515 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 52/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + L+GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLLMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|320176118|gb|EFW51185.1| Protein acetyltransferase [Shigella dysenteriae CDC 74-1112] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQRKMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|300920752|ref|ZP_07137158.1| CoA binding domain protein [Escherichia coli MS 115-1] gi|300412323|gb|EFJ95633.1| CoA binding domain protein [Escherichia coli MS 115-1] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQRKMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|301021929|ref|ZP_07185888.1| CoA binding domain protein [Escherichia coli MS 196-1] gi|299881396|gb|EFI89607.1| CoA binding domain protein [Escherichia coli MS 196-1] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQRKMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|260856678|ref|YP_003230569.1| fused putative acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli O26:H11 str. 11368] gi|260869270|ref|YP_003235672.1| fused putative acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli O111:H- str. 11128] gi|257755327|dbj|BAI26829.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli O26:H11 str. 11368] gi|257765626|dbj|BAI37121.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli O111:H- str. 11128] gi|323156244|gb|EFZ42403.1| acetyltransferase family protein [Escherichia coli EPECa14] gi|323177285|gb|EFZ62873.1| acetyltransferase family protein [Escherichia coli 1180] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQRKMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|170019133|ref|YP_001724087.1| GCN5-related N-acetyltransferase [Escherichia coli ATCC 8739] gi|169754061|gb|ACA76760.1| GCN5-related N-acetyltransferase [Escherichia coli ATCC 8739] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQRKMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|987653|dbj|BAA10925.1| hypothetical 67KD protein [Escherichia coli K-12] Length = 612 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQRKMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|82545039|ref|YP_408986.1| hypothetical protein SBO_2616 [Shigella boydii Sb227] gi|187731968|ref|YP_001881365.1| acetyltransferase, GNAT family protein [Shigella boydii CDC 3083-94] gi|81246450|gb|ABB67158.1| conserved hypothetical protein [Shigella boydii Sb227] gi|187428960|gb|ACD08234.1| acetyltransferase, GNAT family protein [Shigella boydii CDC 3083-94] gi|320186387|gb|EFW61121.1| Protein acetyltransferase [Shigella flexneri CDC 796-83] gi|332092615|gb|EGI97687.1| acetyltransferase family protein [Shigella boydii 3594-74] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQRKMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|16130509|ref|NP_417079.1| inhibiting acetyltransferase for acetyl-CoA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|89109390|ref|AP_003170.1| fused predicted acyl-CoA synthetase NAD(P)-binding subunit and ATP-binding subunit [Escherichia coli str. K-12 substr. W3110] gi|157162064|ref|YP_001459382.1| CoA-binding domain/acetyltransferase domain-containing protein [Escherichia coli HS] gi|170082193|ref|YP_001731513.1| fused acyl-CoA synthetase: NAD(P)-binding subunit; ATP-binding subunit [Escherichia coli str. K-12 substr. DH10B] gi|238901749|ref|YP_002927545.1| fused putative acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli BW2952] gi|256021729|ref|ZP_05435594.1| fused putative acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia sp. 4_1_40B] gi|300951695|ref|ZP_07165515.1| CoA binding domain protein [Escherichia coli MS 116-1] gi|300958773|ref|ZP_07170886.1| CoA binding domain protein [Escherichia coli MS 175-1] gi|301648349|ref|ZP_07248089.1| CoA binding domain protein [Escherichia coli MS 146-1] gi|307139222|ref|ZP_07498578.1| fused putative acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli H736] gi|312973170|ref|ZP_07787342.1| acetyltransferase family protein [Escherichia coli 1827-70] gi|331643208|ref|ZP_08344343.1| putative CoA binding domain protein [Escherichia coli H736] gi|2495644|sp|P76594|YFIQ_ECOLI RecName: Full=Uncharacterized protein yfiQ gi|1788938|gb|AAC75637.1| inhibiting acetyltransferase for acetyl-CoA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|85675472|dbj|BAE76754.1| fused predicted acyl-CoA synthetase NAD(P)-binding subunit and ATP-binding subunit [Escherichia coli str. K12 substr. W3110] gi|157067744|gb|ABV06999.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli HS] gi|169890028|gb|ACB03735.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit; ATP-binding subunit [Escherichia coli str. K-12 substr. DH10B] gi|238861220|gb|ACR63218.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli BW2952] gi|260448336|gb|ACX38758.1| GCN5-related N-acetyltransferase [Escherichia coli DH1] gi|300314581|gb|EFJ64365.1| CoA binding domain protein [Escherichia coli MS 175-1] gi|300449057|gb|EFK12677.1| CoA binding domain protein [Escherichia coli MS 116-1] gi|301073625|gb|EFK88431.1| CoA binding domain protein [Escherichia coli MS 146-1] gi|309702970|emb|CBJ02301.1| putative acyl-CoA synthetase [Escherichia coli ETEC H10407] gi|310331765|gb|EFP99000.1| acetyltransferase family protein [Escherichia coli 1827-70] gi|315137208|dbj|BAJ44367.1| fused putative acyl-CoA synthetase:NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli DH1] gi|315615846|gb|EFU96478.1| acetyltransferase family protein [Escherichia coli 3431] gi|323936324|gb|EGB32615.1| acetyltransferase [Escherichia coli E1520] gi|331040006|gb|EGI12226.1| putative CoA binding domain protein [Escherichia coli H736] gi|332344459|gb|AEE57793.1| acetyltransferase [Escherichia coli UMNK88] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQRKMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|324010171|gb|EGB79390.1| bacterial FdrA protein [Escherichia coli MS 57-2] Length = 515 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YGTIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|170692634|ref|ZP_02883796.1| CoA-binding domain protein [Burkholderia graminis C4D1M] gi|170142290|gb|EDT10456.1| CoA-binding domain protein [Burkholderia graminis C4D1M] Length = 731 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 107/296 (36%), Gaps = 25/296 (8%) Query: 1 MSILVDKNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVP 57 M+ ++ ++ V V G + GK G + I + IHP K Sbjct: 276 MNRIMKPDS-VAVIGASAEDGKIGNSVMKNLINGGYKGDIYPIHP-KADEIMGHK----- 328 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR----V 113 + +V + + +V +P A+ E + IP V I G V + Sbjct: 329 AYKSVLDVP--GNIDVAVFAIPAKFVAGALTEVGKKHIPGAVLIPSGFAETGNVEGQQEI 386 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 A + RL+GPN G +G + S+SG + + + Sbjct: 387 VAIAREYDIRLMGPNIYGFYYTPKNLCATFCTPYDVQGKAALSSQSGGIGMAIIGFSRSA 446 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G S VG+G + D+L F DE T+ I E ++ F + A+ Sbjct: 447 KMGVSAIVGLGNKSDIDED--DLLTFFEQDENTDIIAQHCEDL----KDGRAFAETAARV 500 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +KKP+V AG+T+ R ++G ED K+ G+ A S + Sbjct: 501 SKKKPVVVLKAGRTSLGARAASSHTGALAGNDRIYEDV---FKQCGVIRARSLRDL 553 >gi|296128164|ref|YP_003635414.1| CoA-binding domain protein [Cellulomonas flavigena DSM 20109] gi|296019979|gb|ADG73215.1| CoA-binding domain protein [Cellulomonas flavigena DSM 20109] Length = 707 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 110/281 (39%), Gaps = 27/281 (9%) Query: 24 HTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGA 83 H L + ++P+ G + V ++ E + + +V+ VPP Sbjct: 37 HAMVRALRDFPGTLHLVNPR------GGEVLGRAVIPSLR---EASDVDLAVLVVPPDAV 87 Query: 84 GDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTP-D 136 A+ ++ A V G RV A ++ RL+GPN G + P D Sbjct: 88 PGALEDARAAGTRAAVVCAGGFAESGPAGARVQERVVAVAREAGIRLLGPNTSGFVNPVD 147 Query: 137 SCKIGIMPG-SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 MP + G+VG++++SG + F ++ G+G VG+G +F + Sbjct: 148 RTTANFMPAVADLPPGTVGLVAQSGGVNLALAFLLARAGVGLRLGVGLGNA--VDVDFPE 205 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 VL+ D+AT ++ + E + L + +KP+V G++ Sbjct: 206 VLDHLALDDATTAVGLHVE----GVADGPALLAALRRTTARKPVVALKVGRSDVSEFARS 261 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 H GA+ G A++++G + S + +LV L Sbjct: 262 HTGALT----GSYAVTRAALQQSGAVVVDSLEELVAALVAL 298 >gi|215485431|ref|YP_002327862.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli O127:H6 str. E2348/69] gi|215263503|emb|CAS07830.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli O127:H6 str. E2348/69] Length = 515 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGT---ALCFGNAVRRGNIGIVGASGTGSQELSVRIYEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|293408468|ref|ZP_06652307.1| conserved hypothetical protein [Escherichia coli B354] gi|291471646|gb|EFF14129.1| conserved hypothetical protein [Escherichia coli B354] Length = 515 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGTKEAALKAVMLSGVK 315 >gi|333000444|gb|EGK20026.1| acetyltransferase family protein [Shigella flexneri VA-6] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|332766586|gb|EGJ96791.1| acetyltransferase family protein [Shigella flexneri 2930-71] Length = 865 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 5 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 55 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 56 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 113 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 114 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 171 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 172 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 226 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 227 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 259 >gi|332088096|gb|EGI93221.1| acetyltransferase family protein [Shigella boydii 5216-82] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|325496338|gb|EGC94197.1| CoA-binding domain/acetyltransferase domain-containing protein [Escherichia fergusonii ECD227] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|324113110|gb|EGC07086.1| acetyltransferase [Escherichia fergusonii B253] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|323978386|gb|EGB73471.1| acetyltransferase [Escherichia coli TW10509] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|323188301|gb|EFZ73593.1| acetyltransferase family protein [Escherichia coli RN587/1] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|323173097|gb|EFZ58728.1| acetyltransferase family protein [Escherichia coli LT-68] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|320662741|gb|EFX30080.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O55:H7 str. USDA 5905] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|320657076|gb|EFX24895.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|331684234|ref|ZP_08384830.1| putative CoA binding domain protein [Escherichia coli H299] gi|331079186|gb|EGI50388.1| putative CoA binding domain protein [Escherichia coli H299] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|331664153|ref|ZP_08365063.1| putative CoA binding domain protein [Escherichia coli TA143] gi|331059952|gb|EGI31929.1| putative CoA binding domain protein [Escherichia coli TA143] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|331654047|ref|ZP_08355048.1| putative CoA binding domain protein [Escherichia coli M718] gi|331048896|gb|EGI20972.1| putative CoA binding domain protein [Escherichia coli M718] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|331648331|ref|ZP_08349420.1| putative CoA binding domain protein [Escherichia coli M605] gi|330912352|gb|EGH40862.1| protein acetyltransferase [Escherichia coli AA86] gi|331042880|gb|EGI15021.1| putative CoA binding domain protein [Escherichia coli M605] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|293411000|ref|ZP_06654576.1| yfiQ protein [Escherichia coli B354] gi|291471468|gb|EFF13952.1| yfiQ protein [Escherichia coli B354] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|293415853|ref|ZP_06658496.1| hypothetical protein ECDG_02420 [Escherichia coli B185] gi|291433501|gb|EFF06480.1| hypothetical protein ECDG_02420 [Escherichia coli B185] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|293446939|ref|ZP_06663361.1| hypothetical protein ECCG_01089 [Escherichia coli B088] gi|291323769|gb|EFE63197.1| hypothetical protein ECCG_01089 [Escherichia coli B088] Length = 881 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 21 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 71 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 72 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 129 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 130 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 187 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 188 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 242 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 243 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 275 >gi|222034289|emb|CAP77030.1| Uncharacterized protein yfiQ [Escherichia coli LF82] gi|312947156|gb|ADR27983.1| hypothetical protein NRG857_12835 [Escherichia coli O83:H1 str. NRG 857C] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|218701099|ref|YP_002408728.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli IAI39] gi|218371085|emb|CAR18914.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli IAI39] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|218555168|ref|YP_002388081.1| acyl-CoA synthetase NAD(P)-binding/ATP-binding subunit [Escherichia coli IAI1] gi|218696213|ref|YP_002403880.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli 55989] gi|218352945|emb|CAU98744.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli 55989] gi|218361936|emb|CAQ99537.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli IAI1] gi|320200148|gb|EFW74737.1| Protein acetyltransferase [Escherichia coli EC4100B] gi|324118206|gb|EGC12102.1| acetyltransferase [Escherichia coli E1167] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|215487927|ref|YP_002330358.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli O127:H6 str. E2348/69] gi|312965500|ref|ZP_07779732.1| acetyltransferase, GNAT family [Escherichia coli 2362-75] gi|215265999|emb|CAS10409.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli O127:H6 str. E2348/69] gi|312289920|gb|EFR17808.1| acetyltransferase, GNAT family [Escherichia coli 2362-75] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|209920064|ref|YP_002294148.1| hypothetical protein ECSE_2873 [Escherichia coli SE11] gi|300817638|ref|ZP_07097853.1| CoA binding domain protein [Escherichia coli MS 107-1] gi|300820735|ref|ZP_07100885.1| CoA binding domain protein [Escherichia coli MS 119-7] gi|331678581|ref|ZP_08379256.1| putative CoA binding domain protein [Escherichia coli H591] gi|209913323|dbj|BAG78397.1| conserved hypothetical protein [Escherichia coli SE11] gi|300526488|gb|EFK47557.1| CoA binding domain protein [Escherichia coli MS 119-7] gi|300529626|gb|EFK50688.1| CoA binding domain protein [Escherichia coli MS 107-1] gi|323184536|gb|EFZ69910.1| acetyltransferase family protein [Escherichia coli 1357] gi|323944584|gb|EGB40653.1| acetyltransferase [Escherichia coli H120] gi|324019982|gb|EGB89201.1| CoA binding domain protein [Escherichia coli MS 117-3] gi|331075041|gb|EGI46361.1| putative CoA binding domain protein [Escherichia coli H591] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|110806528|ref|YP_690048.1| hypothetical protein SFV_2647 [Shigella flexneri 5 str. 8401] gi|110616076|gb|ABF04743.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|82778012|ref|YP_404361.1| hypothetical protein SDY_2827 [Shigella dysenteriae Sd197] gi|309784594|ref|ZP_07679229.1| acetyltransferase, GNAT family [Shigella dysenteriae 1617] gi|81242160|gb|ABB62870.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|308927491|gb|EFP72963.1| acetyltransferase, GNAT family [Shigella dysenteriae 1617] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|15803112|ref|NP_289143.1| hypothetical protein Z3869 [Escherichia coli O157:H7 EDL933] gi|168752073|ref|ZP_02777095.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC4113] gi|168768690|ref|ZP_02793697.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC4486] gi|168773486|ref|ZP_02798493.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC4196] gi|168778564|ref|ZP_02803571.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC4076] gi|168790386|ref|ZP_02815393.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC869] gi|168801704|ref|ZP_02826711.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC508] gi|195936732|ref|ZP_03082114.1| hypothetical protein EscherichcoliO157_09760 [Escherichia coli O157:H7 str. EC4024] gi|208808315|ref|ZP_03250652.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. EC4206] gi|208812815|ref|ZP_03254144.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. EC4045] gi|208819903|ref|ZP_03260223.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. EC4042] gi|209400567|ref|YP_002272059.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. EC4115] gi|217327406|ref|ZP_03443489.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. TW14588] gi|254794536|ref|YP_003079373.1| putative acyl-CoA synthetase: NAD(P)-binding subunit and ATP-binding subunit [Escherichia coli O157:H7 str. TW14359] gi|261222980|ref|ZP_05937261.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and ATP-binding subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261259470|ref|ZP_05952003.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and ATP-binding subunit [Escherichia coli O157:H7 str. FRIK966] gi|291283861|ref|YP_003500679.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O55:H7 str. CB9615] gi|12517006|gb|AAG57701.1|AE005488_12 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|187770740|gb|EDU34584.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC4196] gi|188013994|gb|EDU52116.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC4113] gi|189003230|gb|EDU72216.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC4076] gi|189362335|gb|EDU80754.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC4486] gi|189370148|gb|EDU88564.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC869] gi|189376180|gb|EDU94596.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. EC508] gi|208728116|gb|EDZ77717.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. EC4206] gi|208734092|gb|EDZ82779.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. EC4045] gi|208740026|gb|EDZ87708.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. EC4042] gi|209161967|gb|ACI39400.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. EC4115] gi|217319773|gb|EEC28198.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7 str. TW14588] gi|254593936|gb|ACT73297.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and ATP-binding subunit [Escherichia coli O157:H7 str. TW14359] gi|290763734|gb|ADD57695.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O55:H7 str. CB9615] gi|320188925|gb|EFW63584.1| Protein acetyltransferase [Escherichia coli O157:H7 str. EC1212] gi|320640833|gb|EFX10327.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. G5101] gi|320651474|gb|EFX19870.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H- str. H 2687] gi|320667561|gb|EFX34481.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H7 str. LSU-61] gi|326340390|gb|EGD64194.1| Protein acetyltransferase [Escherichia coli O157:H7 str. 1125] gi|326345073|gb|EGD68817.1| Protein acetyltransferase [Escherichia coli O157:H7 str. 1044] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|24113925|ref|NP_708435.1| hypothetical protein SF2646 [Shigella flexneri 2a str. 301] gi|30063985|ref|NP_838156.1| hypothetical protein S2819 [Shigella flexneri 2a str. 2457T] gi|24053028|gb|AAN44142.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30042241|gb|AAP17966.1| hypothetical protein S2819 [Shigella flexneri 2a str. 2457T] gi|281601996|gb|ADA74980.1| putative Acyl-CoA synthetase (NDP forming) [Shigella flexneri 2002017] gi|313648263|gb|EFS12707.1| acetyltransferase, GNAT family [Shigella flexneri 2a str. 2457T] gi|332753994|gb|EGJ84368.1| acetyltransferase family protein [Shigella flexneri 4343-70] gi|332755832|gb|EGJ86190.1| acetyltransferase family protein [Shigella flexneri 2747-71] gi|332761978|gb|EGJ92251.1| acetyltransferase family protein [Shigella flexneri K-671] gi|333000855|gb|EGK20427.1| acetyltransferase family protein [Shigella flexneri K-218] gi|333001677|gb|EGK21244.1| acetyltransferase family protein [Shigella flexneri K-272] gi|333016835|gb|EGK36161.1| acetyltransferase family protein [Shigella flexneri K-304] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|13362921|dbj|BAB36873.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] Length = 484 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|194432051|ref|ZP_03064340.1| CoA binding domain/acetyltransferase domain protein [Shigella dysenteriae 1012] gi|194419580|gb|EDX35660.1| CoA binding domain/acetyltransferase domain protein [Shigella dysenteriae 1012] gi|332089194|gb|EGI94301.1| acetyltransferase family protein [Shigella dysenteriae 155-74] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|188491676|ref|ZP_02998946.1| acetyltransferase, GNAT family protein [Escherichia coli 53638] gi|188486875|gb|EDU61978.1| acetyltransferase, GNAT family protein [Escherichia coli 53638] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|157157254|ref|YP_001463908.1| CoA-binding domain/acetyltransferase domain-containing protein [Escherichia coli E24377A] gi|191167989|ref|ZP_03029791.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli B7A] gi|193068407|ref|ZP_03049370.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli E110019] gi|194429281|ref|ZP_03061808.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli B171] gi|256017266|ref|ZP_05431131.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Shigella sp. D9] gi|260845270|ref|YP_003223048.1| fused putative acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli O103:H2 str. 12009] gi|300904232|ref|ZP_07122091.1| CoA binding domain protein [Escherichia coli MS 84-1] gi|300927039|ref|ZP_07142791.1| CoA binding domain protein [Escherichia coli MS 182-1] gi|301330314|ref|ZP_07222961.1| CoA binding domain protein [Escherichia coli MS 78-1] gi|307313845|ref|ZP_07593461.1| GCN5-related N-acetyltransferase [Escherichia coli W] gi|309794361|ref|ZP_07688784.1| CoA binding domain protein [Escherichia coli MS 145-7] gi|332278258|ref|ZP_08390671.1| CoA-binding domain/acetyltransferase domain-containing protein [Shigella sp. D9] gi|157079284|gb|ABV18992.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli E24377A] gi|190901996|gb|EDV61743.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli B7A] gi|192958359|gb|EDV88799.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli E110019] gi|194412689|gb|EDX28984.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli B171] gi|257760417|dbj|BAI31914.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli O103:H2 str. 12009] gi|300403765|gb|EFJ87303.1| CoA binding domain protein [Escherichia coli MS 84-1] gi|300416923|gb|EFK00234.1| CoA binding domain protein [Escherichia coli MS 182-1] gi|300843648|gb|EFK71408.1| CoA binding domain protein [Escherichia coli MS 78-1] gi|306906346|gb|EFN36861.1| GCN5-related N-acetyltransferase [Escherichia coli W] gi|308121817|gb|EFO59079.1| CoA binding domain protein [Escherichia coli MS 145-7] gi|315061903|gb|ADT76230.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli W] gi|315256612|gb|EFU36580.1| CoA binding domain protein [Escherichia coli MS 85-1] gi|323159157|gb|EFZ45148.1| acetyltransferase family protein [Escherichia coli E128010] gi|323377516|gb|ADX49784.1| GCN5-related N-acetyltransferase [Escherichia coli KO11] gi|332100610|gb|EGJ03956.1| CoA-binding domain/acetyltransferase domain-containing protein [Shigella sp. D9] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|312964646|ref|ZP_07778897.1| bacterial FdrA family protein [Escherichia coli 2362-75] gi|312290667|gb|EFR18545.1| bacterial FdrA family protein [Escherichia coli 2362-75] Length = 515 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGT---ALCFGNAVRRGNIGIVGASGTGSQELSVRIYEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|306813193|ref|ZP_07447386.1| putative enzyme with acyl-CoA domain [Escherichia coli NC101] gi|331656389|ref|ZP_08357351.1| putative oxidoreductase subunit [Escherichia coli TA206] gi|305853956|gb|EFM54395.1| putative enzyme with acyl-CoA domain [Escherichia coli NC101] gi|315300312|gb|EFU59548.1| bacterial FdrA protein [Escherichia coli MS 16-3] gi|331054637|gb|EGI26646.1| putative oxidoreductase subunit [Escherichia coli TA206] Length = 515 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YGTIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIYEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|323191444|gb|EFZ76706.1| bacterial FdrA family protein [Escherichia coli RN587/1] Length = 515 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 102/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGAVL---CFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|300927711|ref|ZP_07143279.1| CoA binding domain protein [Escherichia coli MS 187-1] gi|300464264|gb|EFK27757.1| CoA binding domain protein [Escherichia coli MS 187-1] gi|323941153|gb|EGB37338.1| acetyltransferase [Escherichia coli E482] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALMEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|253772516|ref|YP_003035347.1| GCN5-related N-acetyltransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162559|ref|YP_003045667.1| acyl-CoA synthetase NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli B str. REL606] gi|242378184|emb|CAQ32959.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit, ATP-binding subunit [Escherichia coli BL21(DE3)] gi|253323560|gb|ACT28162.1| GCN5-related N-acetyltransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974460|gb|ACT40131.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli B str. REL606] gi|253978627|gb|ACT44297.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli BL21(DE3)] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALMEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|194437641|ref|ZP_03069737.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli 101-1] gi|194423447|gb|EDX39438.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli 101-1] gi|323961199|gb|EGB56812.1| acetyltransferase [Escherichia coli H489] gi|323971089|gb|EGB66336.1| acetyltransferase [Escherichia coli TA007] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALMEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|254507734|ref|ZP_05119866.1| acetyltransferase, GNAT family [Vibrio parahaemolyticus 16] gi|219549431|gb|EED26424.1| acetyltransferase, GNAT family [Vibrio parahaemolyticus 16] Length = 893 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 41/264 (15%), Positives = 97/264 (36%), Gaps = 22/264 (8%) Query: 46 STYWTGGNVNVPVFTTVAEAKER-------TAANASVIYVPPSGAGDAIIESIEAEIPLI 98 + P +++V + +++ S + E ++ + Sbjct: 36 GGFEGAIMPVTPRYSSVCGVLAYRSIDELPVVPDVAIVCTNASRNIAIFRQLAEKQVKSV 95 Query: 99 VCITEGIPVLDMV------RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 + ++ + + D + ++ R++GPN G++ P +KG Sbjct: 96 IVLSADMHLADEEGSSIQSTCLEIAKAANMRMLGPNSLGLVLPWINFNASFSPVTAQKGK 155 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 + +S+S + + + + +G S V +G +F D+L+ D TE+I++ Sbjct: 156 IAFISQSAAMCTTILDWANDKDIGFSAFVSLGNA--LDVDFADLLDYLSRDSQTEAILLY 213 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 + ++A +F+ R K I+ G+TA + A A GG Sbjct: 214 IDTI----KDARRFMSAARAASRNKRILVLKGGRTAAGRKA---AKAHTGGGDTLDIIYD 266 Query: 273 NAMKEAGICIAPSPARIGRSLVEL 296 +A++ G+ + + ++ L Sbjct: 267 SAIRRTGMLRVNNSHELFAAVETL 290 >gi|117624806|ref|YP_853719.1| acyl-CoA synthetase (NDP forming) [Escherichia coli APEC O1] gi|218559506|ref|YP_002392419.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli S88] gi|237705094|ref|ZP_04535575.1| acyl-CoA synthetase [Escherichia sp. 3_2_53FAA] gi|115513930|gb|ABJ02005.1| acyl-CoA synthetase (NDP forming) [Escherichia coli APEC O1] gi|218366275|emb|CAR04022.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli S88] gi|226901460|gb|EEH87719.1| acyl-CoA synthetase [Escherichia sp. 3_2_53FAA] gi|294493259|gb|ADE92015.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli IHE3034] gi|307625867|gb|ADN70171.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli UM146] gi|315288000|gb|EFU47402.1| CoA binding domain protein [Escherichia coli MS 110-3] gi|323949238|gb|EGB45129.1| acetyltransferase [Escherichia coli H252] gi|323955820|gb|EGB51578.1| acetyltransferase [Escherichia coli H263] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P A+ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWP-----DIARLPFTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|91211912|ref|YP_541898.1| hypothetical protein UTI89_C2907 [Escherichia coli UTI89] gi|91073486|gb|ABE08367.1| hypothetical protein YfiQ [Escherichia coli UTI89] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P A+ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWP-----DIARLPFTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|110642746|ref|YP_670476.1| hypothetical protein ECP_2586 [Escherichia coli 536] gi|191174006|ref|ZP_03035523.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli F11] gi|300974111|ref|ZP_07172461.1| CoA binding domain protein [Escherichia coli MS 200-1] gi|110344338|gb|ABG70575.1| hypothetical protein YfiQ [Escherichia coli 536] gi|190905697|gb|EDV65319.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli F11] gi|300308934|gb|EFJ63454.1| CoA binding domain protein [Escherichia coli MS 200-1] gi|324014371|gb|EGB83590.1| CoA binding domain protein [Escherichia coli MS 60-1] Length = 886 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P A+ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWP-----DIARLPFTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|331661693|ref|ZP_08362616.1| putative oxidoreductase subunit [Escherichia coli TA143] gi|331060115|gb|EGI32079.1| putative oxidoreductase subunit [Escherichia coli TA143] Length = 515 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGTKEAALKAVMLSGVK 315 >gi|117653829|gb|ABK55329.1| p22 [Caenorhabditis remanei] gi|117653831|gb|ABK55330.1| p22 [Caenorhabditis remanei] Length = 199 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 16/164 (9%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + +TK +V G K G + VV +P K Y+ + +P Sbjct: 36 LFEDDTKAIVWGQQAKAIQGMLDFDYVCRRNSPSVVASTYPFTGDNKQKYYFGQKEILIP 95 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A+ V + + ++E++E +I +I I EG+P ++ Sbjct: 96 AYKSMAKAFATHPEASVMVTFASMRSVFETVLEALEFPQIKVIAIIAEGVPENQTRKLLK 155 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKG 151 LIGP G + P + KIG I+ ++R G Sbjct: 156 IAHDRGVTLIGPATVGGIKPGAFKIGNTGGMMDNILASKLYRPG 199 >gi|157382716|gb|ABV48796.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA28] Length = 346 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 50/119 (42%) Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 IGGD G++F+D + F + + +V++GE+GG A+ +KD Sbjct: 1 AIGGDRFPGSDFLDHMLRFEKNPQVKMMVLLGEVGGELGYRVAEAIKDGRITKPVIAWCI 60 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 K GHAGA + A+ K A++EAG + S + + + L Sbjct: 61 GTISKHFGGEVQFGHAGAKAGAERETADAKNEALREAGAYVPKSFNDLPELIRGVYEEL 119 >gi|301024871|ref|ZP_07188508.1| CoA binding domain protein [Escherichia coli MS 69-1] gi|300396402|gb|EFJ79940.1| CoA binding domain protein [Escherichia coli MS 69-1] Length = 886 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEELRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|117653795|gb|ABK55312.1| p22 [Caenorhabditis remanei] gi|117653817|gb|ABK55323.1| p22 [Caenorhabditis remanei] gi|117653819|gb|ABK55324.1| p22 [Caenorhabditis remanei] gi|117653825|gb|ABK55327.1| p22 [Caenorhabditis remanei] gi|117653833|gb|ABK55331.1| p22 [Caenorhabditis remanei] gi|117653837|gb|ABK55333.1| p22 [Caenorhabditis remanei] gi|117653841|gb|ABK55335.1| p22 [Caenorhabditis remanei] gi|117653845|gb|ABK55337.1| p22 [Caenorhabditis remanei] gi|117653855|gb|ABK55342.1| p22 [Caenorhabditis remanei] gi|117653859|gb|ABK55344.1| p22 [Caenorhabditis remanei] Length = 199 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 16/164 (9%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + +TK +V G K G + VV +P K Y+ + +P Sbjct: 36 LFEDDTKAIVWGQQAKAIQGMLDFDYVCRRNSPSVVASTYPFTGDNKQKYYFGQKEILIP 95 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A+ V + + ++E++E +I +I I EG+P ++ Sbjct: 96 AYKSMAKAFATHPEASVMVTFASMRSVFETVLEALEFPQIKVIAIIAEGVPENQTRKLLK 155 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKG 151 LIGP G + P + KIG I+ ++R G Sbjct: 156 IAHDRGVTLIGPATVGGIKPGAFKIGNTGGMMDNILASKLYRPG 199 >gi|218547831|ref|YP_002381622.1| hypothetical protein EFER_0419 [Escherichia fergusonii ATCC 35469] gi|218355372|emb|CAQ87979.1| putative enzyme with acyl-CoA domain [Escherichia fergusonii ATCC 35469] Length = 515 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGTKEAALKAVMLSGVK 315 >gi|328953924|ref|YP_004371258.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109] gi|328454248|gb|AEB10077.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109] Length = 888 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 98/270 (36%), Gaps = 24/270 (8%) Query: 37 VGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIP 96 V I+PK + +P + V E + +VI +P + + + + + Sbjct: 44 VFPINPK------IQEILGLPAYPAVTEVP--GTIDLAVIAIPIADIPPVLRQCGQVGVK 95 Query: 97 LIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 V I+ G ++A E++ R +G + G++ P + Sbjct: 96 TAVIISVGGKEVGAEGDRIEAEIQAAAEEAGIRYLGHSSLGLICPWVGLHASLARQAVHP 155 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G + +S+SG L + +++ +G S + +G +F D+++ E SI+ Sbjct: 156 GHLAFISQSGALCSSVLGWAARKNIGFSHFISVGSK--TDLDFADLIDYLGNQEPARSII 213 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + E +F+ R KPI+ AG+ RT H + E Sbjct: 214 IYMESLT----RHRKFMSAARSVSRIKPIIVIKAGRQQTKTRTGEHRNDPLISEDTAYE- 268 Query: 271 KINAMKEAGICIAPSPARIGRSLVELLGSL 300 + AGI + ++ E LG + Sbjct: 269 --AFFRRAGIVRVDTIGQLFDC-AETLGKI 295 >gi|218547889|ref|YP_002381680.1| acyl-CoA synthetase NAD(P)-binding subunit/ATP-binding subunit [Escherichia fergusonii ATCC 35469] gi|218355430|emb|CAQ88038.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia fergusonii ATCC 35469] Length = 886 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGESLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|320638495|gb|EFX08206.1| putative acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli O157:H7 str. G5101] Length = 515 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVILVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE I ++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGTKEAALKAVMLSGVK 315 >gi|300937783|ref|ZP_07152581.1| bacterial FdrA protein [Escherichia coli MS 21-1] gi|300457224|gb|EFK20717.1| bacterial FdrA protein [Escherichia coli MS 21-1] Length = 515 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 52/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + L+GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLLMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|300786454|ref|YP_003766745.1| acyl-CoA synthetase [Amycolatopsis mediterranei U32] gi|299795968|gb|ADJ46343.1| acyl-CoA synthetase [Amycolatopsis mediterranei U32] Length = 708 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 103/283 (36%), Gaps = 18/283 (6%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + +AG G IHP ++ + ++ + Sbjct: 262 VAVIGASAEAGKIGNSVLKNLVNGGYAGEIHPINPK---AAEILDRKAYASITDVP--GD 316 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----RVKARLEKSSSRLIG 126 + +V +P A+ E+ E + + I G + V A K R++G Sbjct: 317 VDVAVFAIPAKFVPAALEEAGEKGVAGAILIPSGFGETGNIALQDEVVAIARKHGVRILG 376 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN G KG V + S+SG + + + +G S+ VG+G Sbjct: 377 PNIYGYYYTPENLSATFCTPYDVKGGVALSSQSGGIGMAILGFSRSAKMGVSSIVGVGNK 436 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + D+L D+ TE I M E ++ F + + ++KP+V AG+ Sbjct: 437 ADLDED--DLLTFCEQDDNTELIAMHLEDL----KDGRAFAETAKRVSQRKPVVVLKAGR 490 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 T+ R ++G +D ++++G+ AP + Sbjct: 491 TSQGARAASSHTGALAGNDKVYDD---ILRQSGVIRAPGLNDM 530 >gi|284042768|ref|YP_003393108.1| CoA-binding protein [Conexibacter woesei DSM 14684] gi|283946989|gb|ADB49733.1| CoA-binding domain protein [Conexibacter woesei DSM 14684] Length = 904 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 91/244 (37%), Gaps = 18/244 (7%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVR 112 + ++ E + + +V+ VP A E + + + G Sbjct: 255 YRSLDEVPDE--IDLAVLAVPAGEVLGAARACGERGVRALAVLAAGFAESGPDGAARQRE 312 Query: 113 VKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 + + RL+GPNC G+L P S G +G+LS+SG + + Q Sbjct: 313 LLRACRGAGMRLVGPNCLGVLNTDPRVRLDATFAPSHPPAGGIGLLSQSGGVGIALLEQA 372 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 G+G ST V +G D LE DE T +I++ E G+ +F + Sbjct: 373 RALGIGVSTFVSVGNKA--DLSGNDFLEWSEQDERTRAILLYLESFGNP----RKFARIA 426 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 + G++KPIV AG+TA R + A + ++AG+ + + Sbjct: 427 RRVGQRKPIVAVKAGRTAAGARAASSHTGALLASSELAVAAL--FRQAGVLRVDTLGELF 484 Query: 291 RSLV 294 Sbjct: 485 DLAA 488 >gi|281179633|dbj|BAI55963.1| conserved hypothetical protein [Escherichia coli SE15] Length = 886 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 98/281 (34%), Gaps = 29/281 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KG--STYWTGGNVNVPVFTTVAEAKERTAANASV 75 +AG + V + P K N+P + +V Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPDIANLP-----------FTPDLAV 74 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 75 LCTNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAP 132 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 ++G + +S+S ++ + Q +G S + +G + + Sbjct: 133 WQGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--E 190 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +L+ D T +I++ E +A +F+ R KPI+ +G++ P + + Sbjct: 191 LLDYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLL 245 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + A + A++ AG+ + ++ L Sbjct: 246 NTTAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|117653803|gb|ABK55316.1| p22 [Caenorhabditis remanei] gi|117653805|gb|ABK55317.1| p22 [Caenorhabditis remanei] gi|117653827|gb|ABK55328.1| p22 [Caenorhabditis remanei] gi|117653839|gb|ABK55334.1| p22 [Caenorhabditis remanei] Length = 199 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 16/164 (9%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + +TK +V G K G + VV +P K Y+ + +P Sbjct: 36 LFEDDTKAIVWGQQAKAIQGMLDFDYVCRRNSPSVVASTYPFTGDNKQKYYFGQKEILIP 95 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A+ V + + ++E++E +I +I I EG+P ++ Sbjct: 96 AYKSMAKAFATHPEASVMVTFASMRSVFETVLEALEFPQIKVIAIIAEGVPENQTRKLLK 155 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKG 151 LIGP G + P + KIG I+ ++R G Sbjct: 156 IAHDRGVTLIGPATVGGIKPGAFKIGNTGGMMDNILASKLYRPG 199 >gi|117653815|gb|ABK55322.1| p22 [Caenorhabditis remanei] Length = 199 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 16/164 (9%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + +TK +V G K G + VV +P K Y+ + +P Sbjct: 36 LFEDDTKAIVWGQQAKAIQGMLDFDYVCRRNSPSVVASTYPFTGDNKQKYYFGQKEILIP 95 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A+ V + + ++E++E +I +I I EG+P ++ Sbjct: 96 AYKSMAKAFATHPEASVMVTFASMRSVFETVLEALEFPQIKVIAIIAEGVPENQTRKLLK 155 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKG 151 LIGP G + P + KIG I+ ++R G Sbjct: 156 IAHDRGVTLIGPATVGGIKPGAFKIGNTGGMMDNILASKLYRPG 199 >gi|117653849|gb|ABK55339.1| p22 [Caenorhabditis remanei] Length = 199 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 16/164 (9%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + +TK +V G K G + VV +P K Y+ + +P Sbjct: 36 LFEDDTKAIVWGQQAKAIQGMLDFDYVCRRNSPSVVASTYPFTGDNKQKYYFGQKEILIP 95 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A+ V + + ++E++E +I +I I EG+P ++ Sbjct: 96 AYKSMAKAFATHPEASVMVTFASMRSVFETVLEALEFPQIKVIAIIAEGVPENQTRKLLK 155 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKG 151 LIGP G + P + KIG I+ ++R G Sbjct: 156 IAHDRGVTLIGPATVGGIKPGAFKIGNTGGMMDNILASKLYRPG 199 >gi|331669335|ref|ZP_08370183.1| putative CoA binding domain protein [Escherichia coli TA271] gi|331064529|gb|EGI36440.1| putative CoA binding domain protein [Escherichia coli TA271] Length = 652 Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|300903418|ref|ZP_07121345.1| bacterial FdrA protein [Escherichia coli MS 84-1] gi|300923786|ref|ZP_07139808.1| bacterial FdrA protein [Escherichia coli MS 182-1] gi|301301465|ref|ZP_07207600.1| bacterial FdrA protein [Escherichia coli MS 124-1] gi|301325026|ref|ZP_07218573.1| bacterial FdrA protein [Escherichia coli MS 78-1] gi|300404560|gb|EFJ88098.1| bacterial FdrA protein [Escherichia coli MS 84-1] gi|300419942|gb|EFK03253.1| bacterial FdrA protein [Escherichia coli MS 182-1] gi|300842962|gb|EFK70722.1| bacterial FdrA protein [Escherichia coli MS 124-1] gi|300848074|gb|EFK75834.1| bacterial FdrA protein [Escherichia coli MS 78-1] gi|315256141|gb|EFU36109.1| bacterial FdrA protein [Escherichia coli MS 85-1] gi|324117045|gb|EGC10957.1| FdrA protein [Escherichia coli E1167] Length = 515 Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|256020295|ref|ZP_05434160.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Shigella sp. D9] gi|300820448|ref|ZP_07100600.1| bacterial FdrA protein [Escherichia coli MS 119-7] gi|331666627|ref|ZP_08367501.1| putative oxidoreductase subunit [Escherichia coli TA271] gi|331675981|ref|ZP_08376693.1| putative oxidoreductase subunit [Escherichia coli H591] gi|332281461|ref|ZP_08393874.1| bacterial FdrA protein [Shigella sp. D9] gi|300527233|gb|EFK48302.1| bacterial FdrA protein [Escherichia coli MS 119-7] gi|331065851|gb|EGI37735.1| putative oxidoreductase subunit [Escherichia coli TA271] gi|331076039|gb|EGI47321.1| putative oxidoreductase subunit [Escherichia coli H591] gi|332103813|gb|EGJ07159.1| bacterial FdrA protein [Shigella sp. D9] Length = 515 Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|333015953|gb|EGK35288.1| acetyltransferase family protein [Shigella flexneri K-227] Length = 886 Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----MLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|320646179|gb|EFX15119.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli O157:H- str. 493-89] Length = 652 Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|114055013|gb|ABI50081.1| ATP citrate lyase alpha subunit [Thermovibrio ammonificans] Length = 348 Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 6/124 (4%) Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + IGGD G++F+D L F + A + +VM+GE+GG E + L+ K KP+ Sbjct: 1 CIAIGGDRFPGSDFLDHLLRFQKNPAVKYMVMLGEVGGELEYMVVEALE---KGLITKPL 57 Query: 240 VGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + G A GHAGA + A+ K A++EAG + S I + ++ Sbjct: 58 IAWCIGTIAKHFGGEVQFGHAGAKAGADRETADAKNRALREAGALVPESFNDIPDLIRKV 117 Query: 297 LGSL 300 L Sbjct: 118 YEDL 121 >gi|146312710|ref|YP_001177784.1| GCN5-related N-acetyltransferase [Enterobacter sp. 638] gi|145319586|gb|ABP61733.1| GCN5-related N-acetyltransferase [Enterobacter sp. 638] Length = 887 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 102/279 (36%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +AG + V + P + G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVMPVTP---AYKAVQGVLAWPDIDSLPFV-----PDLAVLCT 77 Query: 79 PPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 ++E++ E + ++ P + A + RL+GPN G+L P Sbjct: 78 HAKR-NITLLEALGEKGCKTCIILSS--PPEQQAELMACASRYQMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 RKG + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIRKGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + H+ Sbjct: 193 DFLARDSKTSAILLYLEHLS----DARRFVSAARSAARNKPILVIKSGRS-PAAQRLLHS 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 SG + A++ AG+ + ++ L Sbjct: 248 ---HSGMDPAWD---AAIQRAGLLRVQDTHELFSAVETL 280 >gi|319790348|ref|YP_004151981.1| CoA-binding domain protein [Thermovibrio ammonificans HB-1] gi|317114850|gb|ADU97340.1| CoA-binding domain protein [Thermovibrio ammonificans HB-1] Length = 663 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 94/258 (36%), Gaps = 27/258 (10%) Query: 37 VGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIP 96 V ++PK ++ + ++ E + +++ +P G + I E + + Sbjct: 250 VFPVNPK------HEKVLDFKCYPSILAVPE--PVDCALVAIPAKGVPEVIRECGKKGVK 301 Query: 97 LIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 L V I+ G +K +S R++GPN G + P Sbjct: 302 LAVVISAGFGETGEEGRKLQEELKRAAAESGIRVLGPNTLGFIVPGLKLNASFSTVTPPP 361 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G LS+SG L + + ++E G S + +G E + LEL D +T+ ++ Sbjct: 362 GETSFLSQSGALITAVIDKAAEERFGFSEIISLGNQA--DIEITETLELATRDPSTKVVL 419 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 E + A+ L + KP + AG++ R ++G + Sbjct: 420 SYVE----GLKLGAELLNFLNR----KPCIFIKAGRSESGRRAAASHTGSLAGN---YKL 468 Query: 271 KINAMKEAGICIAPSPAR 288 +A++ G + S Sbjct: 469 FKDAVETKGGIVVDSLEE 486 >gi|317487436|ref|ZP_07946223.1| CoA binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316921295|gb|EFV42594.1| CoA binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 716 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 92/247 (37%), Gaps = 16/247 (6%) Query: 50 TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 G + P + + + ++I + P I + +E + + ++ G Sbjct: 49 GGEILGQPTYPDILSVP--GEVDLAIIAIAPKHILPIIEQCVEKGVKTGIVVSTGFGETG 106 Query: 110 ------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLT 163 R+ K + R++GPNC G+ + + G + ++ +SG Sbjct: 107 PEGKEIERRMLEIARKGNMRIMGPNCMGMYSSAVSLNASI--IDLAPGPMSLVLQSGNFG 164 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSA-EEE 222 + F + G+G S IG F D + D+ T+ +++ E EE+ Sbjct: 165 IDLNFNAKKRGMGYSCWATIGNQ--MDVRFNDFVRYIEQDDHTKVMLLYMEGLRVENEED 222 Query: 223 AAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 +FL+ + KPI G++A R ++G + + A+ +AG+ Sbjct: 223 GRKFLEAARRTSVSKPIAAIKIGRSAAGARAAASHTGSLAGSERIFD---AALAQAGVVR 279 Query: 283 APSPARI 289 +P + Sbjct: 280 VNTPNEL 286 >gi|301019972|ref|ZP_07184106.1| bacterial FdrA protein [Escherichia coli MS 69-1] gi|300399002|gb|EFJ82540.1| bacterial FdrA protein [Escherichia coli MS 69-1] Length = 515 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|117653853|gb|ABK55341.1| p22 [Caenorhabditis remanei] Length = 199 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 16/164 (9%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + +TK +V G K G + VV +P K Y+ + +P Sbjct: 36 LFEDDTKAIVWGQQAKAIQGMLDFDYVCRRNSPSVVASTYPFTGDNKQKYYFGQKEILIP 95 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A+ V + + ++E++E +I +I I EG+P ++ Sbjct: 96 AYKSMAKAFATHPEASVMVTFASMRSVFETVLEALEFPQIKVIAIIAEGVPENQTRKLLK 155 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKG 151 LIGP G + P + KIG I+ ++R G Sbjct: 156 IAHDRGVTLIGPATVGGIKPGAFKIGNTGGMMDNILASKLYRPG 199 >gi|117653797|gb|ABK55313.1| p22 [Caenorhabditis remanei] gi|117653799|gb|ABK55314.1| p22 [Caenorhabditis remanei] gi|117653807|gb|ABK55318.1| p22 [Caenorhabditis remanei] gi|117653809|gb|ABK55319.1| p22 [Caenorhabditis remanei] gi|117653811|gb|ABK55320.1| p22 [Caenorhabditis remanei] gi|117653813|gb|ABK55321.1| p22 [Caenorhabditis remanei] gi|117653821|gb|ABK55325.1| p22 [Caenorhabditis remanei] gi|117653835|gb|ABK55332.1| p22 [Caenorhabditis remanei] gi|117653847|gb|ABK55338.1| p22 [Caenorhabditis remanei] gi|117653851|gb|ABK55340.1| p22 [Caenorhabditis remanei] gi|117653857|gb|ABK55343.1| p22 [Caenorhabditis remanei] Length = 199 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 16/164 (9%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + +TK +V G K G + VV +P K Y+ + +P Sbjct: 36 LFEDDTKAIVWGQQAKAIQGMLDFDYVCRRNSPSVVASTYPFTGDNKQKYYFGQKEILIP 95 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A+ V + + ++E++E +I +I I EG+P ++ Sbjct: 96 AYKSMAKAFATHPEASVMVTFASMRSVFETVLEALEFPQIKVIAIIAEGVPENQTRKLLK 155 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKG 151 LIGP G + P + KIG I+ ++R G Sbjct: 156 IAHDRGVTLIGPATVGGIKPGAFKIGNTGGMMDNILASKLYRPG 199 >gi|320662485|gb|EFX29874.1| Bacterial FdrA protein [Escherichia coli O55:H7 str. USDA 5905] Length = 515 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE I ++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGTKEAALKAVMLSGVK 315 >gi|15800044|ref|NP_286056.1| putative oxidoreductase subunit [Escherichia coli O157:H7 EDL933] gi|15829623|ref|NP_308396.1| oxidoreductase subunit [Escherichia coli O157:H7 str. Sakai] gi|168749187|ref|ZP_02774209.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4113] gi|168755890|ref|ZP_02780897.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4401] gi|168761981|ref|ZP_02786988.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4501] gi|168769691|ref|ZP_02794698.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4486] gi|168775363|ref|ZP_02800370.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4196] gi|168782688|ref|ZP_02807695.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4076] gi|168788608|ref|ZP_02813615.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC869] gi|168799743|ref|ZP_02824750.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC508] gi|195937815|ref|ZP_03083197.1| putative oxidoreductase subunit [Escherichia coli O157:H7 str. EC4024] gi|208809406|ref|ZP_03251743.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4206] gi|208815953|ref|ZP_03257132.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4045] gi|208823146|ref|ZP_03263464.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4042] gi|209400839|ref|YP_002268951.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4115] gi|217324539|ref|ZP_03440623.1| bacterial FdrA protein [Escherichia coli O157:H7 str. TW14588] gi|254791494|ref|YP_003076331.1| putative acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli O157:H7 str. TW14359] gi|261223795|ref|ZP_05938076.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli O157:H7 str. FRIK2000] gi|261256003|ref|ZP_05948536.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli O157:H7 str. FRIK966] gi|12513137|gb|AAG54664.1|AE005210_8 putative oxidoreductase subunit [Escherichia coli O157:H7 str. EDL933] gi|13359826|dbj|BAB33792.1| putative oxidoreductase subunit [Escherichia coli O157:H7 str. Sakai] gi|187769113|gb|EDU32957.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4196] gi|188016454|gb|EDU54576.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4113] gi|188999874|gb|EDU68860.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4076] gi|189356915|gb|EDU75334.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4401] gi|189361304|gb|EDU79723.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4486] gi|189367649|gb|EDU86065.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4501] gi|189371673|gb|EDU90089.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC869] gi|189377895|gb|EDU96311.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC508] gi|208729207|gb|EDZ78808.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4206] gi|208732601|gb|EDZ81289.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4045] gi|208737339|gb|EDZ85023.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4042] gi|209162239|gb|ACI39672.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4115] gi|209744876|gb|ACI70745.1| putative oxidoreductase subunit [Escherichia coli] gi|209744878|gb|ACI70746.1| putative oxidoreductase subunit [Escherichia coli] gi|209744882|gb|ACI70748.1| putative oxidoreductase subunit [Escherichia coli] gi|217320760|gb|EEC29184.1| bacterial FdrA protein [Escherichia coli O157:H7 str. TW14588] gi|254590894|gb|ACT70255.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli O157:H7 str. TW14359] gi|320192341|gb|EFW66985.1| Putative oxidoreductase subunit [Escherichia coli O157:H7 str. EC1212] gi|326343396|gb|EGD67160.1| Putative oxidoreductase subunit [Escherichia coli O157:H7 str. 1044] gi|326347215|gb|EGD70941.1| Putative oxidoreductase subunit [Escherichia coli O157:H7 str. 1125] Length = 515 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE I ++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGTKEAALKAVMLSGVK 315 >gi|148258919|ref|YP_001243504.1| putative Acetyl-CoA synthetase [Bradyrhizobium sp. BTAi1] gi|146411092|gb|ABQ39598.1| putative Acetyl-CoA synthetase [Bradyrhizobium sp. BTAi1] Length = 903 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 9/182 (4%) Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + RL+GPNC G+L P + + G + ++S+SG + V SQ Sbjct: 117 RSARAAGLRLVGPNCLGVLAPGARLNASFASRMPLAGDLAVVSQSGAIAAGMVEWASQRT 176 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G S + IG +F D+L+ F D AT ++++ E ++A +F+ Sbjct: 177 VGFSAIISIGDQ--LDVDFGDLLDFFAFDRATRAVLLYVESV----KDARKFMSAARAAA 230 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 R KP+V +G+ A + ++G + A + AG+ + + Sbjct: 231 RTKPVVVVKSGRHAAAAKAAATHTGAMAGSDAVYD---AAFRRAGLLRVLDLGELFDAAE 287 Query: 295 EL 296 L Sbjct: 288 TL 289 >gi|320196420|gb|EFW71044.1| Protein acetyltransferase [Escherichia coli WV_060327] Length = 886 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PSSQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|302344175|ref|YP_003808704.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075] gi|301640788|gb|ADK86110.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075] Length = 709 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 99/274 (36%), Gaps = 20/274 (7%) Query: 25 TEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAG 84 T Q + + G + P + G+ V+ T+A+ A + +++ VP Sbjct: 29 TMQMLNIVASGFPGQVLPVHPTEKEIFGHK---VYPTIADLP--FAPDLALLVVPTKLVP 83 Query: 85 DAIIESIEAEIPLIVCITEGIPV-----LDMVRVK-ARLEKSSSRLIGPNCPGILTPDSC 138 I + + V +T G D+ K R +GPNC G++ Sbjct: 84 QMIDDLGKLGTRHAVVVTAGFKETGPDGQDLEWQVVDIANKHGLRFVGPNCMGVVNAHLP 143 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 + G + ++S+SGT + + Q G+ S V +G + + +D LE Sbjct: 144 LNTAVSPLCAPPGGLSLVSQSGTYVTQTNYYLGQRGVRISKGVSVGNEA--SIDLVDCLE 201 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I + E +E FL ++ R KPIV G R+ Sbjct: 202 YLGDDPQTTAIGLYIECIRRPKE----FLAVASRISRDKPIVAQYVGGNEFGARSGSSHT 257 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 ++G + +AG+ P+ + R Sbjct: 258 GALAGPDFIYDGL---FAQAGVIRVPTIEDVYRL 288 >gi|300935718|ref|ZP_07150687.1| CoA binding domain protein [Escherichia coli MS 21-1] gi|300459107|gb|EFK22600.1| CoA binding domain protein [Escherichia coli MS 21-1] Length = 886 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PSSQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|170681301|ref|YP_001744773.1| CoA-binding domain/acetyltransferase domain-containing protein [Escherichia coli SMS-3-5] gi|170519019|gb|ACB17197.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli SMS-3-5] Length = 886 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PSSQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|206891146|ref|YP_002247894.1| acetyl-CoA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206743084|gb|ACI22141.1| acetyl-CoA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 898 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 110/298 (36%), Gaps = 31/298 (10%) Query: 1 MSI-----LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN 55 MSI + ++ V G GT + G ++P + Sbjct: 1 MSIYNLEYFFNPR-RIAVIGADNTPGTIGYTVFRNLIGEEYKGIVYPVNPKS---DSVQG 56 Query: 56 VPVFTTVAEAKERTAANASVIYVP-PSGAGDAIIESIEAEIPLIVCITEGI--PVLDMVR 112 V + + + + + V+ D + E + ++ + V + + Sbjct: 57 VEAYKRLNDISKE--IDLVVLAEECGGNVLDILEECGQKGAKGVILLCPDFRTKVKEAMH 114 Query: 113 VKARL----EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 ++ ++ K RL+GPN G + P + KG++ ++++S TL+ + Sbjct: 115 LEEKIEEIHRKYGFRLLGPNSLGFIRPGINLNVSLFRRKLNKGNIALIAQSATLSVALLD 174 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + + + +G S V +G D +F D+++ F D +T +IV+ + + + +F+ Sbjct: 175 RAADKNIGFSYFVSLGSD--IDIDFADLIDFFGVDPSTRAIVIYMQ----SIKNGRKFMT 228 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI--NAMKEAGICIAP 284 KPIV +GK A+ G EDK+ A K AG Sbjct: 229 SARSFAFSKPIVIVKSGKFVESLEV-----ALTHSGLLAGEDKVYDTAFKRAGAVRVD 281 >gi|218703605|ref|YP_002411124.1| hypothetical protein ECUMN_0359 [Escherichia coli UMN026] gi|293403440|ref|ZP_06647531.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298379051|ref|ZP_06988932.1| yahF protein [Escherichia coli FVEC1302] gi|300896300|ref|ZP_07114844.1| bacterial FdrA protein [Escherichia coli MS 198-1] gi|218430702|emb|CAR11574.1| putative enzyme with acyl-CoA domain [Escherichia coli UMN026] gi|291429293|gb|EFF02313.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298280164|gb|EFI21668.1| yahF protein [Escherichia coli FVEC1302] gi|300359841|gb|EFJ75711.1| bacterial FdrA protein [Escherichia coli MS 198-1] Length = 515 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|70953624|ref|XP_745901.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56526366|emb|CAH74294.1| hypothetical protein PC000023.00.0 [Plasmodium chabaudi chabaudi] Length = 287 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 13/202 (6%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK---- 114 + ++ + K+ + + +VI VP A+ E + +V IT G +K Sbjct: 90 YKSLKDIKDDS-IHLAVIAVPRDYVLAAMEELKCKNVRGVVIITAGFKETGEEGLKLEKQ 148 Query: 115 --ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 +K++ R+IGPNC GI+ S KG +LS+SG + A+ + Q Sbjct: 149 IIDIAKKNNIRIIGPNCLGIIHSYHNMNASFADSDILKGHFSLLSQSGAICSAALDLSLQ 208 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 +G S + +G + +F +++E D+ T+ I++ E G + +F++ + Sbjct: 209 HNIGFSHFISVGS--MCDVQFYELIEYLFYDDNTKYILLYVESIG----DMDRFMETCKR 262 Query: 233 RGRKKPIVGFVAGKTAPPGRTM 254 KPI+ +GKTA Sbjct: 263 ICLYKPIIVLKSGKTAKAAEAA 284 >gi|324111285|gb|EGC05267.1| FdrA protein [Escherichia fergusonii B253] Length = 515 Score = 99.3 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|94499635|ref|ZP_01306172.1| Acyl-CoA synthetase (NDP forming) [Oceanobacter sp. RED65] gi|94428389|gb|EAT13362.1| Acyl-CoA synthetase (NDP forming) [Oceanobacter sp. RED65] Length = 910 Score = 99.3 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 97/280 (34%), Gaps = 25/280 (8%) Query: 33 QTQVVGGI--HPKKGSTYWTGGNVNVPVFTTVA--EAKERTA-----ANASVIYVPPSGA 83 T + G + + K + VN+ + TV + + ++I P Sbjct: 24 TTSMGGAVIQNLKSAGFKGSVYAVNIRRYKTVHGVPCVSKIGRLPKDIDLAIICTPAPTI 83 Query: 84 GDAIIESIEAEIPLIVCITEGIP---VLDMVRVKARLEK----SSSRLIGPNCPGILTPD 136 I + + I ++ +T GI K L + R++GP+C G+L PD Sbjct: 84 EKIIKQLGKIGIHAVIILTGGISRKRAEQFRPSKNPLRQLSREYDVRIMGPDCLGLLIPD 143 Query: 137 SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 G V L +SGTL + G+G S + IG D Sbjct: 144 LKLNASYSHIQALPGKVAYLGQSGTLASALLDWAHGRGIGFSHFLTIGDSA--DVAMPDA 201 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGH 256 ++ + ++I++ E +A F++ R K ++ +G+ ++ Sbjct: 202 IDYLSSQRQVKAIMLHLE----QVHDAKAFVRAVRNASRSKLVLAIKSGRFP---QSQSP 254 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + +G + + AG+ S + S+ L Sbjct: 255 VDLIPAGLRHRDMVYEAILLRAGVLRVDSTEELFESVESL 294 >gi|291281222|ref|YP_003498040.1| Bacterial FdrA protein [Escherichia coli O55:H7 str. CB9615] gi|209744874|gb|ACI70744.1| putative oxidoreductase subunit [Escherichia coli] gi|290761095|gb|ADD55056.1| Bacterial FdrA protein [Escherichia coli O55:H7 str. CB9615] gi|320644062|gb|EFX13142.1| Bacterial FdrA protein [Escherichia coli O157:H- str. 493-89] gi|320649345|gb|EFX17896.1| Bacterial FdrA protein [Escherichia coli O157:H- str. H 2687] gi|320656907|gb|EFX24767.1| Bacterial FdrA protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320665301|gb|EFX32391.1| Bacterial FdrA protein [Escherichia coli O157:H7 str. LSU-61] Length = 515 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE I ++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGTKEAALKAVMLSGVK 315 >gi|209744880|gb|ACI70747.1| putative oxidoreductase subunit [Escherichia coli] Length = 515 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE I ++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGTKEAALKAVMLSGVK 315 >gi|293413570|ref|ZP_06656219.1| yahF protein [Escherichia coli B185] gi|291433628|gb|EFF06601.1| yahF protein [Escherichia coli B185] Length = 515 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE I ++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGTKEAALKAVMLSGVK 315 >gi|284920130|emb|CBG33189.1| conserved hypothetical protein [Escherichia coli 042] Length = 515 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|227887620|ref|ZP_04005425.1| CoA-binding domain/acetyltransferase domain protein [Escherichia coli 83972] gi|227835970|gb|EEJ46436.1| CoA-binding domain/acetyltransferase domain protein [Escherichia coli 83972] gi|307554603|gb|ADN47378.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli ABU 83972] Length = 886 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 98/281 (34%), Gaps = 29/281 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KG--STYWTGGNVNVPVFTTVAEAKERTAANASV 75 +AG + V + P K G +P + +V Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPGIARLP-----------FTPDLAV 74 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 75 LCTNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAP 132 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 ++G + +S+S ++ + Q +G S + +G + + Sbjct: 133 WQGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--E 190 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +L+ D T +I++ E +A +F+ R KPI+ +G++ P + + Sbjct: 191 LLDYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLL 245 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + A + A++ AG+ + ++ L Sbjct: 246 NTTAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|26248950|ref|NP_754990.1| hypothetical protein c3109 [Escherichia coli CFT073] gi|300982308|ref|ZP_07176016.1| CoA binding domain protein [Escherichia coli MS 45-1] gi|301047223|ref|ZP_07194315.1| CoA binding domain protein [Escherichia coli MS 185-1] gi|26109356|gb|AAN81558.1|AE016764_240 Hypothetical protein yfiQ [Escherichia coli CFT073] gi|300300900|gb|EFJ57285.1| CoA binding domain protein [Escherichia coli MS 185-1] gi|300408795|gb|EFJ92333.1| CoA binding domain protein [Escherichia coli MS 45-1] gi|315294519|gb|EFU53867.1| CoA binding domain protein [Escherichia coli MS 153-1] Length = 886 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 98/281 (34%), Gaps = 29/281 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KG--STYWTGGNVNVPVFTTVAEAKERTAANASV 75 +AG + V + P K G +P + +V Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPGIARLP-----------FTPDLAV 74 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 75 LCTNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAP 132 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 ++G + +S+S ++ + Q +G S + +G + + Sbjct: 133 WQGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--E 190 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +L+ D T +I++ E +A +F+ R KPI+ +G++ P + + Sbjct: 191 LLDYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLL 245 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + A + A++ AG+ + ++ L Sbjct: 246 NTTAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|193064379|ref|ZP_03045461.1| bacterial FdrA protein [Escherichia coli E22] gi|194427625|ref|ZP_03060173.1| bacterial FdrA protein [Escherichia coli B171] gi|209917532|ref|YP_002291616.1| hypothetical protein ECSE_0341 [Escherichia coli SE11] gi|218552883|ref|YP_002385796.1| hypothetical protein ECIAI1_0318 [Escherichia coli IAI1] gi|260842524|ref|YP_003220302.1| putative acyl-CoA synthetase [Escherichia coli O103:H2 str. 12009] gi|293418392|ref|ZP_06660827.1| yahF protein [Escherichia coli B088] gi|307312298|ref|ZP_07591934.1| FdrA family protein [Escherichia coli W] gi|192929041|gb|EDV82653.1| bacterial FdrA protein [Escherichia coli E22] gi|194414395|gb|EDX30669.1| bacterial FdrA protein [Escherichia coli B171] gi|209910791|dbj|BAG75865.1| conserved hypothetical protein [Escherichia coli SE11] gi|218359651|emb|CAQ97192.1| putative enzyme with acyl-CoA domain [Escherichia coli IAI1] gi|257757671|dbj|BAI29168.1| predicted acyl-CoA synthetase [Escherichia coli O103:H2 str. 12009] gi|291324920|gb|EFE64335.1| yahF protein [Escherichia coli B088] gi|306907800|gb|EFN38302.1| FdrA family protein [Escherichia coli W] gi|315059604|gb|ADT73931.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli W] gi|323184619|gb|EFZ69991.1| bacterial FdrA family protein [Escherichia coli 1357] gi|323379832|gb|ADX52100.1| putative acyl-CoA synthetase [Escherichia coli KO11] gi|323945501|gb|EGB41555.1| bacterial FdrA protein [Escherichia coli H120] gi|324020436|gb|EGB89655.1| bacterial FdrA protein [Escherichia coli MS 117-3] Length = 515 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|226365191|ref|YP_002782974.1| acyl-CoA synthetase [Rhodococcus opacus B4] gi|226243681|dbj|BAH54029.1| putative acyl-CoA synthetase [Rhodococcus opacus B4] Length = 687 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 85/229 (37%), Gaps = 14/229 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + + VP D + E++ + + IT GIP + AR+ + +RL+G N Sbjct: 76 PDLVALCVPAPFVSDVVDEALALGVRGFLGITSGIPAE--ADLAARIRSAGARLVGTNSL 133 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 GI + + F G + I+S+SG L E ++ G+G S V IG Sbjct: 134 GIYDSATDL--SLAWGRFTPGPLAIVSQSGQLGSELATLGARHGVGVSRFVSIGNQ--SD 189 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 ++L + T I + E E L+ GR P + G +A Sbjct: 190 VTAAELLADLGNHDPTRVIALYLESFSDGESLFR-TLRALRDTGR--PTLLLTVGASAAS 246 Query: 251 GR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 R H G++ S + A + AG+ +P + L Sbjct: 247 TRLARSHTGSLTSAT----DVVDAACRAAGVLRVHTPDELITVARAFLS 291 >gi|254470932|ref|ZP_05084335.1| succinyl-CoA synthetase, alpha subunit [Pseudovibrio sp. JE062] gi|211960074|gb|EEA95271.1| succinyl-CoA synthetase, alpha subunit [Pseudovibrio sp. JE062] Length = 94 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 66/90 (73%), Positives = 84/90 (93%) Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 M+GEIGGSAEEEAA++LK++A +GRKKP+VGF+AG+TAPPGRTMGHAGAVISGGKGGA+D Sbjct: 1 MIGEIGGSAEEEAAEWLKEQAAKGRKKPMVGFIAGRTAPPGRTMGHAGAVISGGKGGADD 60 Query: 271 KINAMKEAGICIAPSPARIGRSLVELLGSL 300 KI AM++AGI ++PSPA++G++LV LL L Sbjct: 61 KIAAMEDAGIRVSPSPAKLGKTLVALLEEL 90 >gi|117653823|gb|ABK55326.1| p22 [Caenorhabditis remanei] gi|117653843|gb|ABK55336.1| p22 [Caenorhabditis remanei] Length = 199 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 16/164 (9%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + +TK +V G K G + VV +P K Y+ + +P Sbjct: 36 LFEDDTKAIVWGQQAKAIQGMLDFDYVCRRNSPSVVASTYPFTGDNKQKYYFGQKEILIP 95 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A+ V + + ++E++E +I +I I EG+P ++ Sbjct: 96 AYKSMAKAFATHPEASVMVTFASMRSVFETVLEALEFPQIKVIAIIAEGVPENQTRKLLK 155 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKG 151 LIGP G + P + KIG I+ ++R G Sbjct: 156 IAHDRGVTLIGPATVGGIKPGAFKIGNTGGMMDNILSSKLYRPG 199 >gi|324998636|ref|ZP_08119748.1| acetyl-CoA synthetase [Pseudonocardia sp. P1] Length = 904 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 106/295 (35%), Gaps = 30/295 (10%) Query: 9 TKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEA 65 + V V G + K G + T V ++P V + +V + Sbjct: 224 SSVAVIGASADETKIGHAVLVNLLRAGFTGPVYPVNP------DARSVRGVRAYPSVIDI 277 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEK 119 + + +V+ VP + + + + + ++V I+ G R+ A Sbjct: 278 PDE--VDLAVVAVPAANIDEVMDSCLAKGVKVLVVISSGFADAGGGGKVAERRLVAEARA 335 Query: 120 SSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 R++GPN G+ PD + ++ G G +SG L + GLG Sbjct: 336 HGMRVVGPNALGVANPDPSVRLNATLAPAMPGPGRTGFFCQSGALGTAILANARSRGLGL 395 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S+ V G D+++ + D T+ +++ E G+ +F + + R K Sbjct: 396 SSFVSAGNRA--DVSGNDLMQYWQTDPGTDQVLLYLESFGNP----RKFARVARRLARTK 449 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 PIV +G+ P ++ A I +++G+ + ++ + Sbjct: 450 PIVAVKSGRHTGPLPSLAGTAAQI-----DESSVQVLFEQSGVIRVQTLPQLFDT 499 >gi|170683991|ref|YP_001742455.1| acyl-CoA synthetase [Escherichia coli SMS-3-5] gi|170521709|gb|ACB19887.1| bacterial FdrA protein [Escherichia coli SMS-3-5] Length = 515 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 52/228 (22%), Positives = 102/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + L+GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLLMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMFDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|74310907|ref|YP_309326.1| putative oxidoreductase subunit [Shigella sonnei Ss046] gi|73854384|gb|AAZ87091.1| putative oxidoreductase subunit [Shigella sonnei Ss046] Length = 515 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE I ++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAVLKAVMLSGVK 315 >gi|117653801|gb|ABK55315.1| p22 [Caenorhabditis remanei] Length = 199 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 16/164 (9%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 L + +TK +V G K G + VV +P K Y+ + +P Sbjct: 36 LFEDDTKAIVWGQQAKAIQGMLDFDYVCRRNSPSVVASTYPFTGDNKQKYYFGQKEILIP 95 Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIE-AEIPLIVCITEGIPVLDMVRVKA 115 + ++A+A A+ V + + ++E++E +I +I I EG+P ++ Sbjct: 96 AYKSMAKAFATHPEASVMVTFASMRSVFETVLEALEFPQIKVIAIIAEGVPENQTRKLLK 155 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGSIFRKG 151 LIGP G + P + KIG I+ ++R G Sbjct: 156 IAHDRGVTLIGPATVGGIKPGAFKIGNTGGMMDNILASKLYRPG 199 >gi|74313147|ref|YP_311566.1| hypothetical protein SSON_2710 [Shigella sonnei Ss046] gi|73856624|gb|AAZ89331.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|323167777|gb|EFZ53472.1| acetyltransferase family protein [Shigella sonnei 53G] Length = 886 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGSFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|325496296|gb|EGC94155.1| bacterial FdrA protein [Escherichia fergusonii ECD227] Length = 515 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|294815543|ref|ZP_06774186.1| Putative acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064] gi|326443893|ref|ZP_08218627.1| putative acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294328142|gb|EFG09785.1| Putative acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064] Length = 1203 Score = 98.9 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 94/258 (36%), Gaps = 26/258 (10%) Query: 43 KKGSTYWTGGNVNVPVFTTVAEAKERTA--ANASVIYVPPSGAGDAIIESIEAEIPLIVC 100 G T G VP F +VAE T + +V+ VP +A+ + E + +V Sbjct: 251 GGGRTEVEG----VPAFRSVAEIAAATGEAVDLAVVAVPVERVPEAVADCGEHGVRGLVV 306 Query: 101 ITEGIPVLDM------VRVKARLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGS 152 +T G + R R+IGPN GI++ + G Sbjct: 307 LTAGYAESGAEGRRRQRELVRRARSYGMRIIGPNSLGIISTADAVRLNASLAPGSPAPGR 366 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 +G+ ++SG + + + + G G ST + G D L+ + D T+ ++M Sbjct: 367 IGLFTQSGAIGIALLSELHRRGAGLSTFISSGNRA--DVSGNDFLQYWYDDPDTDVVLMY 424 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI 272 E G+ +F + + KP+V + + A + + Sbjct: 425 LESIGNP----RKFTRLARRTAAVKPLVVVKGARHSGSEPPGHAVPATR-----IPDAAV 475 Query: 273 NA-MKEAGICIAPSPARI 289 A +++AG+ + + Sbjct: 476 GALLRQAGVIRVDTVTEL 493 >gi|324008441|gb|EGB77660.1| CoA binding domain protein [Escherichia coli MS 57-2] Length = 886 Score = 98.9 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDID--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|306814352|ref|ZP_07448514.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli NC101] gi|305851746|gb|EFM52198.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli NC101] Length = 886 Score = 98.9 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDID--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|301307259|ref|ZP_07213277.1| acetyltransferase, GNAT family [Escherichia coli MS 124-1] gi|300837552|gb|EFK65312.1| acetyltransferase, GNAT family [Escherichia coli MS 124-1] Length = 830 Score = 98.9 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 87/226 (38%), Gaps = 15/226 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + +V+ S + E E + ++ P ++A + + RL+GPN Sbjct: 14 PDLAVLCTNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSL 71 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G+L P ++G + +S+S ++ + Q +G S + +G Sbjct: 72 GLLAPWQGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDID 131 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 + ++L+ D T +I++ E +A +F+ R KPI+ +G++ P Sbjct: 132 VD--ELLDYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PA 184 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + + A + A++ AG+ + ++ L Sbjct: 185 AQRLLNTTAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 224 >gi|269125872|ref|YP_003299242.1| CoA-binding domain-containing protein [Thermomonospora curvata DSM 43183] gi|268310830|gb|ACY97204.1| CoA-binding domain protein [Thermomonospora curvata DSM 43183] Length = 821 Score = 98.9 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 105/286 (36%), Gaps = 27/286 (9%) Query: 21 GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPP 80 G + T V +HP V + TV + + + +V+ V Sbjct: 216 GQTVLRHLLAGDFTGPVYPVHP------TATAVAGVRAYRTVLDIPD--PVDLAVVAVRA 267 Query: 81 SGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILT 134 + + + + +V ++ G + + R++GPNC GI Sbjct: 268 EAVHEVVEQCAGKGVHGLVVVSAGFGETGEEGRARQRELVRLARANGMRVVGPNCLGIAN 327 Query: 135 PDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 D + ++ +G +G S+SG L + + ++ GLG ST V G Sbjct: 328 TDPAVRLNASLAPTMPGRGPIGFFSQSGALGIAILQRAAERGLGLSTFVSAGNRA--DVS 385 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 D+L+ + D AT +++ E G+ +F + + R KPIV G++ G Sbjct: 386 GNDLLQYWEEDPATGVVLLYLESIGNP----RKFTRLARRISRAKPIVAVKTGRS-TQGV 440 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +GHA ++ +AG+ ++ + +LL Sbjct: 441 PLGHAARALTLPDHAVSAL---FAQAGVIRVDDLDQLFD-VAQLLA 482 >gi|110634576|ref|YP_674784.1| GCN5-related N-acetyltransferase [Mesorhizobium sp. BNC1] gi|110285560|gb|ABG63619.1| GCN5-related N-acetyltransferase [Chelativorans sp. BNC1] Length = 893 Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 98/282 (34%), Gaps = 19/282 (6%) Query: 17 TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVI 76 G G E + V ++PK + T E +VI Sbjct: 24 QGSVGRIVLENILAGGFVGDVWPVNPK------YREIDGRRCYATANELPAAPH--LAVI 75 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR--VKARLEKSSSRLIGPNCPGILT 134 P I + + V I+ G+ + +R + + R+IGPN G++ Sbjct: 76 ATPARTVPGIIGALGKNGTRIAVVISAGLTRENGLRQAMLEAAKPYLFRVIGPNTVGLIV 135 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 P + + G + +LS+SG + + + EG+G S V +G + + Sbjct: 136 PPAKLNASFAHMNPQAGGIALLSQSGAIATTLIDWAADEGIGFSHVVSLG--DMADVDVG 193 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM 254 D L+L D T +I++ E + +F+ R KP++ G+ A + Sbjct: 194 DYLDLLAGDARTRAILLYLE----SIPNPRKFMSAARAAARLKPVIAVKTGRHAAAAKAA 249 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +SG E A+ AGI + + + Sbjct: 250 TTHTGALSGSDKVVE---AALGRAGILRVRGLRELFDAAETV 288 >gi|156932875|ref|YP_001436791.1| hypothetical protein ESA_00676 [Cronobacter sakazakii ATCC BAA-894] gi|156531129|gb|ABU75955.1| hypothetical protein ESA_00676 [Cronobacter sakazakii ATCC BAA-894] Length = 887 Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 104/280 (37%), Gaps = 27/280 (9%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + + V + P K G + P VA + +V+ Sbjct: 27 RAGFLMMRNLLAGGFSGPVLPVTPAWKA----VCGVLAWP---DVASLP--FTPDLAVLC 77 Query: 78 VPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD 136 A++E++ E + ++ P + A + RL+GPN G+L P Sbjct: 78 THAKRNL-ALLEALGEKGCKTCLVLSS--PPEQHAELLACAARFQMRLLGPNSLGLLAPW 134 Query: 137 SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 RKG + +S+S ++ + Q LG S + +G P + ++ Sbjct: 135 QGLNASFSPVPIRKGKLAFISQSAAVSNTILDWAQQRQLGFSWFIALGDSPDIDVD--EL 192 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGH 256 L+ D T +I++ E +A +F+ R KPI+ +G++ P R + + Sbjct: 193 LDYLARDSKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRS-PSARRLLN 247 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G A D A++ AG+ + ++ L Sbjct: 248 T----HAGLDTAWD--AAIQRAGLLRVQDTHELFSAVETL 281 >gi|222032139|emb|CAP74878.1| Uncharacterized protein yahF [Escherichia coli LF82] gi|312944918|gb|ADR25745.1| putative enzyme with acyl-CoA domain [Escherichia coli O83:H1 str. NRG 857C] Length = 515 Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 52/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A +S++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQSLQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|157159834|ref|YP_001457152.1| acyl-CoA synthetase [Escherichia coli HS] gi|193068623|ref|ZP_03049584.1| bacterial FdrA protein [Escherichia coli E110019] gi|260853548|ref|YP_003227439.1| putative acyl-CoA synthetase [Escherichia coli O26:H11 str. 11368] gi|157065514|gb|ABV04769.1| bacterial FdrA protein [Escherichia coli HS] gi|192957986|gb|EDV88428.1| bacterial FdrA protein [Escherichia coli E110019] gi|257752197|dbj|BAI23699.1| predicted acyl-CoA synthetase [Escherichia coli O26:H11 str. 11368] gi|323158127|gb|EFZ44225.1| bacterial FdrA family protein [Escherichia coli EPECa14] Length = 515 Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE I ++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|296269560|ref|YP_003652192.1| CoA-binding domain-containing protein [Thermobispora bispora DSM 43833] gi|296092347|gb|ADG88299.1| CoA-binding domain protein [Thermobispora bispora DSM 43833] Length = 697 Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 93/247 (37%), Gaps = 19/247 (7%) Query: 60 TTVAEAKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL----DMVRVK 114 +V ++ + V+ VP +G + E+++ + IT G+ + Sbjct: 65 QSVPSVRDVPGELDLVVLCVPAAGVPQVVREALDKGARGFLGITAGLDRALHPGAERELA 124 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + + +R++GPNC GI + + F G +GI+S+SG L E + G Sbjct: 125 REIRRRGARIVGPNCLGIYDAATDL--QLAWGEFTPGPLGIVSQSGQLGSELANLAADSG 182 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK-R 233 LG S V +G + L E T + + E + + ++ + R Sbjct: 183 LGVSRFVSVGNQ--VDVTAEEALADLAEHEQTRVVALYVESF----IDGRRMIRTLRRLR 236 Query: 234 GRKKPIVGFVAG-KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 KP + G A H GA+ S + A + AG +PAR+ Sbjct: 237 DAGKPTIVLTVGASEASRAAARSHTGAMTSAL----DVVDAACRAAGAIRVDTPARLVAV 292 Query: 293 LVELLGS 299 LLG+ Sbjct: 293 AQALLGA 299 >gi|260866489|ref|YP_003232891.1| putative acyl-CoA synthetase [Escherichia coli O111:H- str. 11128] gi|257762845|dbj|BAI34340.1| predicted acyl-CoA synthetase [Escherichia coli O111:H- str. 11128] gi|323178421|gb|EFZ63999.1| bacterial FdrA family protein [Escherichia coli 1180] Length = 515 Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE I ++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|323965265|gb|EGB60723.1| FdrA protein [Escherichia coli M863] gi|327254629|gb|EGE66245.1| bacterial FdrA family protein [Escherichia coli STEC_7v] Length = 515 Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGI 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|323164121|gb|EFZ49928.1| bacterial FdrA family protein [Shigella sonnei 53G] Length = 515 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE I ++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|331674033|ref|ZP_08374796.1| putative CoA binding domain protein [Escherichia coli TA280] gi|331069306|gb|EGI40698.1| putative CoA binding domain protein [Escherichia coli TA280] Length = 886 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ R Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRSPAAQR----- 243 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +++ +G A++ AG+ + ++ L Sbjct: 244 --LLNTTEGMDPAWDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|218693780|ref|YP_002401447.1| putative enzyme with acyl-CoA domain [Escherichia coli 55989] gi|300817150|ref|ZP_07097368.1| bacterial FdrA protein [Escherichia coli MS 107-1] gi|309796662|ref|ZP_07691067.1| bacterial FdrA protein [Escherichia coli MS 145-7] gi|218350512|emb|CAU96200.1| putative enzyme with acyl-CoA domain [Escherichia coli 55989] gi|300530126|gb|EFK51188.1| bacterial FdrA protein [Escherichia coli MS 107-1] gi|308119674|gb|EFO56936.1| bacterial FdrA protein [Escherichia coli MS 145-7] gi|320201093|gb|EFW75676.1| Putative oxidoreductase subunit [Escherichia coli EC4100B] Length = 515 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE I ++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|312970410|ref|ZP_07784591.1| bacterial FdrA family protein [Escherichia coli 1827-70] gi|310337059|gb|EFQ02197.1| bacterial FdrA family protein [Escherichia coli 1827-70] Length = 515 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE I ++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|218706090|ref|YP_002413609.1| acyl-CoA synthetase NAD(P)-binding/ATP-binding subunit [Escherichia coli UMN026] gi|293406027|ref|ZP_06650019.1| yfiQ protein [Escherichia coli FVEC1412] gi|298381827|ref|ZP_06991426.1| hypothetical protein ECFG_01567 [Escherichia coli FVEC1302] gi|300895653|ref|ZP_07114253.1| CoA binding domain protein [Escherichia coli MS 198-1] gi|218433187|emb|CAR14085.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli UMN026] gi|284922536|emb|CBG35623.1| putative acyl-CoA synthetase [Escherichia coli 042] gi|291428235|gb|EFF01262.1| yfiQ protein [Escherichia coli FVEC1412] gi|298279269|gb|EFI20783.1| hypothetical protein ECFG_01567 [Escherichia coli FVEC1302] gi|300360413|gb|EFJ76283.1| CoA binding domain protein [Escherichia coli MS 198-1] Length = 886 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNANRNLVLLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|323097745|emb|CBJ18434.1| ATP citrate lyase [uncultured bacterium] Length = 339 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 6/124 (4%) Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + IGGD G+ FID L + + ++++GE+GG+ E + + +K+ KPI Sbjct: 1 CIAIGGDRFVGSVFIDNLLRLEKNPDVKYMILLGEVGGTEEYKVIEAIKE---GKLTKPI 57 Query: 240 VGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + G A G GHAGA + + AE K AM EAGI + S + + + E+ Sbjct: 58 IAWCIGTIAKHYDSGVQFGHAGASANDDRETAEAKNRAMAEAGIHVPESFNELPQVINEV 117 Query: 297 LGSL 300 L Sbjct: 118 YTKL 121 >gi|323699487|ref|ZP_08111399.1| CoA-binding domain protein [Desulfovibrio sp. ND132] gi|323459419|gb|EGB15284.1| CoA-binding domain protein [Desulfovibrio desulfuricans ND132] Length = 901 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 58/311 (18%), Positives = 107/311 (34%), Gaps = 31/311 (9%) Query: 1 MSI----LVDKNTKVLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN 53 MS+ + K T V V G T AG + +G + P G Sbjct: 1 MSVTNLEYLFKPTSVAVIGATNDPRNAGNIVMRNIMAGG---FLGPVMPVSSQAEAIAGV 57 Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV-- 111 + P +V + + +V+ P + I E V + G + Sbjct: 58 LTHP---SVRHLPK--TPDLAVVCSPLEEVPEVIHSLKERGTRAAVIMGAGFASMSYEES 112 Query: 112 -----RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + + + R++GP G + P + + G V +S+S +L Sbjct: 113 QDIKSTILSIAQPPDIRILGPKSLGFMVPSLNLNASLAHARVEPGKVAFISQSDSLFATV 172 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + +G+G S V +G F D+L+ +D T SI++ E + ++A +F Sbjct: 173 LDWAIDKGVGFSHMVALGSR--IDVTFADILDYLGSDPLTRSIMLYVE----SIKDAREF 226 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISG-GKGGAEDKINAMKEAGICIAPS 285 + R KP++ G+ +G +G G+ E A + AG+ Sbjct: 227 MSAARAASRNKPVLVIRPGQALD--TVLGDLKLRETGDGRHSDEIYDVAFRRAGMLRVED 284 Query: 286 PARIGRSLVEL 296 + + L Sbjct: 285 IDGLFDAAQTL 295 >gi|226939292|ref|YP_002794363.1| acetyl-CoA synthetase [Laribacter hongkongensis HLHK9] gi|226714216|gb|ACO73354.1| Probable acetyl-CoA synthetase [Laribacter hongkongensis HLHK9] Length = 897 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 94/250 (37%), Gaps = 18/250 (7%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVC---ITEGIPVLDMV 111 +P ++V + +V+ + E + + ++ + P+ V Sbjct: 56 GMPAVSSVRSI--EAPIDLAVVTTAVRTWPGIMKECGKKGVKAVLFAKEFGDADPLAHEV 113 Query: 112 RV--KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 A + R++GPN G++ P R G++ ++S S L + Sbjct: 114 MQESLAIAREYRIRVLGPNMLGLMRPTIGLNASNYNGTVRAGNLALVSHSSALCAAMLDW 173 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 +G+G ++ + +G +F ++L+ + D T+ I++ +A +F+ Sbjct: 174 ADAKGIGFTSVISMGDS--VDLDFGEILDYLVYDNQTQGILLHLHHI----HDARRFMSA 227 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 R KP+V +G+ A P S + A++ AG+ + A++ Sbjct: 228 LRMASRTKPVVVIKSGRAAEP----LSGVTTSSHLTASEDVYDAALERAGVLRVNTIAQL 283 Query: 290 GRSLVELLGS 299 + +L + Sbjct: 284 -FTAARVLAA 292 >gi|325965303|ref|YP_004243208.1| acyl-CoA synthetase (NDP forming) [Arthrobacter phenanthrenivorans Sphe3] gi|323471390|gb|ADX75074.1| acyl-CoA synthetase (NDP forming) [Arthrobacter phenanthrenivorans Sphe3] Length = 677 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 89/238 (37%), Gaps = 18/238 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSR 123 + +V+ VP + A+ +S + G +VK + + R Sbjct: 65 GPDLAVLCVPAAATAQALRDSAAHGAKAALVCAGGFEEAGGPGIEYSAQVKDAVRDTGIR 124 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFR--KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 L+GPN G P + GSV +++ SG + + F + G G S AV Sbjct: 125 LLGPNTSGFFVPGRNLRASFVPGVAELEPGSVAVVAASGGVNHVLAFHLQRSGAGVSLAV 184 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 GIG DVL+ + D+ T+++ + E + + ++ KP+V Sbjct: 185 GIGAG--TDITAPDVLDYLITDQQTKAVALHLETVS----DGPALIDAVSRLSAVKPVVA 238 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V G+ H GA+ + + +K+AG I ++ ++ L G Sbjct: 239 LVVGRNDVSEFAQSHTGALATSWRTTRSV----LKQAGAVIVDDENQLVAAVTALAGR 292 >gi|237803499|ref|ZP_04591084.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025481|gb|EGI05537.1| succinyl-CoA synthetase subunit alpha [Pseudomonas syringae pv. oryzae str. 1_6] Length = 101 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 56/101 (55%), Positives = 74/101 (73%), Gaps = 4/101 (3%) Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 +LF D TE+IVM+GEIGGSAEEEAA ++K KP+V ++AG TAPPG+ MGHA Sbjct: 1 KLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKAHV----TKPVVSYIAGVTAPPGKRMGHA 56 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 GA+ISGGKG A++K A+++AG+ S A IG++L EL G Sbjct: 57 GAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTG 97 >gi|302339818|ref|YP_003805024.1| CoA-binding protein [Spirochaeta smaragdinae DSM 11293] gi|301637003|gb|ADK82430.1| CoA-binding domain protein [Spirochaeta smaragdinae DSM 11293] Length = 467 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 99/256 (38%), Gaps = 22/256 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 +HP + +VP + +V+ E +++ V + E I + + Sbjct: 44 PVHPSR------SEIFSVPAYPSVSALPEVPE--LALVTVARQRVIPVVEECIACGVKAV 95 Query: 99 VCITEGIPVLD--MVRVKARLEK--SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 V I+ G D ++ RL++ S R+IGPNC G+ + + R+G V Sbjct: 96 VIISAGFAEADDYGRSLQRRLKELSSRIRIIGPNCAGLADVKNSFFMTRLFAKPRRGGVS 155 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 +S SG L + G+G +G E +V++ +L D T + E Sbjct: 156 FVSSSGALMMALFGSFAGRGIGLRYLASLGNQVDVCME--EVMDYYLDDPETTVLTAFIE 213 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKIN 273 GS + K KR P+V +G++ R H ++ S G+ Sbjct: 214 GVGSGDSFVRLLQKAGRKR---IPLVAVKSGRSELGSRIAATHTASLASSGR----VFEA 266 Query: 274 AMKEAGICIAPSPARI 289 ++ G + SPA++ Sbjct: 267 VFRQYGAILVDSPAQM 282 >gi|268592358|ref|ZP_06126579.1| putative oxidoreductase subunit [Providencia rettgeri DSM 1131] gi|291312144|gb|EFE52597.1| putative oxidoreductase subunit [Providencia rettgeri DSM 1131] Length = 516 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 12/207 (5%) Query: 51 GGNVNVPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 GG + + T+ AK AN +VI V A ++E ++ ++ ++ + + D Sbjct: 94 GGGQHEAKYATINSAKTHIPDANLAVISVNGQFAAREARIALENDLN-VMLFSDNVSIED 152 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 + +K K ++GP+C + + + G+ R+GS+GI+ SGT + E + Sbjct: 153 ELALKQLASKKGLLMMGPDCGTAIINGT---ALCFGNSVRRGSIGIIGASGTGSQELSVR 209 Query: 170 TSQEGLGQSTAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + G G S +G GG + G ID L++ AD+ T+ I ++ + A+ Sbjct: 210 IHEFGAGVSQLIGTGGRDLSEKIGGIMMIDALKMLDADDETQVIALISKPPAP---NVAK 266 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGR 252 + ++A++ K +V F+ + P + Sbjct: 267 KVLEQAEKCHKPVVVCFLGSQPLPEDK 293 >gi|294625678|ref|ZP_06704300.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600047|gb|EFF44162.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 902 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 49/234 (20%), Positives = 89/234 (38%), Gaps = 15/234 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 + VI P + + + + +T G+ P R++A R++GP Sbjct: 70 PDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGSGPGSPAARMEAAARAKGMRILGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 +C G++ P + + + G + ++S S + V +G S V +G Sbjct: 130 HCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLG--D 187 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 +F D+L+ F D T +I++ E G +A +F+ R KP+V +G+ Sbjct: 188 TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVVKSGRQ 243 Query: 248 APPG-RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 HA A+ G A AG+ + + + E LG L Sbjct: 244 YRINPNADTHAQALA----GSDAVYGAAFARAGLLRVGALDELFAA-AETLGRL 292 >gi|332158874|ref|YP_004424153.1| hypothetical protein PNA2_1235 [Pyrococcus sp. NA2] gi|331034337|gb|AEC52149.1| hypothetical protein PNA2_1235 [Pyrococcus sp. NA2] Length = 439 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 96/260 (36%), Gaps = 22/260 (8%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK G G T+ + + S+I +P D I + ++ Sbjct: 40 PVNPKGGEVEIAGKRF------TIKRELDE-KVDVSIIVIPAKLVPDLIRK-LKGLTKGA 91 Query: 99 VCITEGIPVLDMVRV----KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 V I+ G + V + ++ R+IGPNC GI G + G + Sbjct: 92 VVISAGFSEVGNVELEDELVRAAREAGIRVIGPNCAGIFGVHGKFFGSFEVRV-NPGGLA 150 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++S+SG A+ ++EG+G S V G + D L F DE T+ I + E Sbjct: 151 LISQSGAFGGAALAMGNEEGVGFSAFVSYGNAA--DLDESDFLRYFAEDENTKVIALYIE 208 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 ++ +F + ++KP++ AGK+ + ++ G E Sbjct: 209 ----GVKDGRKFFEALKYASKRKPVIILKAGKSKSGAKAAASHTGSLA---GSYEIYRAV 261 Query: 275 MKEAGICIAPSPARIGRSLV 294 K++ + + + Sbjct: 262 FKQSNVIEVEEMEELFDAAK 281 >gi|311277405|ref|YP_003939636.1| FdrA family protein [Enterobacter cloacae SCF1] gi|308746600|gb|ADO46352.1| FdrA family protein [Enterobacter cloacae SCF1] Length = 516 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 49/228 (21%), Positives = 101/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T++ A +N +VI V + A +++E ++ ++ ++ + + D + +K Sbjct: 102 YATLSSAHTHIPESNLAVISVNGAFAAREARQALENDLN-VMLFSDNVSLEDELALKQLA 160 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + G+ + R+GS+GI+ SGT + E + + G G Sbjct: 161 HQKGLLMMGPDCGTAIINGA---GLCFANEVRRGSIGIIGASGTGSQELSVRIHEFGGGI 217 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L++ D TE I ++ + A A + L+ + Sbjct: 218 SQLIGTGGRDLSEKIGGIMMLDALQMLEEDAQTEVIALISKPPAPAV--ARKVLE--RAK 273 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ G+ Sbjct: 274 SCRKPVVVCFLGRGEPQADEEG-----LQFARGTKEAALKAVLLTGVK 316 >gi|218690701|ref|YP_002398913.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli ED1a] gi|218428265|emb|CAR09184.2| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit [Escherichia coli ED1a] Length = 886 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 99/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + R +GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRQLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|225181233|ref|ZP_03734678.1| CoA-binding domain protein [Dethiobacter alkaliphilus AHT 1] gi|225168013|gb|EEG76819.1| CoA-binding domain protein [Dethiobacter alkaliphilus AHT 1] Length = 716 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 97/278 (34%), Gaps = 25/278 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 K GT H + +HP G + TV + + ++ V Sbjct: 26 KMGTLHALNILKGGYGGKFFPLHPT--EETVLGHKA----YRTVDQLPQVPE--LVMLIV 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR------LEKSSSRLIGPNCPGI 132 P A + E + +T G K + + R +GPNC G+ Sbjct: 78 PTDAALHLLDEFGRLGTRRAIVVTSGFRETGAAGQKKEEELQEIARRHNIRFLGPNCIGM 137 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 + + + G +G+ S+SGT + + G+ S A+ +G + + Sbjct: 138 MNSQISLNTTVMPLSGQPGRLGMASQSGTYVTQTFSYLKERGIHFSKAISVGNE--TDID 195 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG-FVAGKTAPPG 251 D LE DE T++I + E ++ A+F+ K KP++ +V G A Sbjct: 196 ITDALEYLGQDEETKAIALYIE----GIKDGARFIDVAQKITPHKPVIAQYVGGSAAGAR 251 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 M H G++ K+AGI + + Sbjct: 252 AGMSHTGSMAGPDFL----YEGIFKQAGIIRVDTVEDL 285 >gi|148658610|ref|YP_001278815.1| CoA-binding domain-containing protein [Roseiflexus sp. RS-1] gi|148570720|gb|ABQ92865.1| CoA-binding domain protein [Roseiflexus sp. RS-1] Length = 698 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 107/278 (38%), Gaps = 24/278 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 K G + + + + IHP+ +N+P + +V + E + +V+ V Sbjct: 22 KLGHRILKNILDAGYSGRIFPIHPR------ATQILNLPAYPSVEQVPE--PIDLAVVVV 73 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGI----PVLDMVRVK--ARLEKSSSRLIGPNCPGI 132 P + + + + +V I+ G P ++ + + + R+IGPNC G+ Sbjct: 74 PAAVTLEVAEACGKRGVRGLVVISAGFKEIGPEGRVLEERLLEITRRYNMRMIGPNCLGV 133 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 + + G + +S+SG L + + +G+G S V +G + Sbjct: 134 IDTTTRLNASFAALYPHAGQIAFMSQSGALCTAILDWSRVQGIGFSRFVSLGNKA--DVD 191 Query: 193 FIDVLELFLADE-ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 + +L+ + D+ I+ E G+ +E F+ + + P++ +G T Sbjct: 192 EVTLLQAWGCDKVHNRVILAYLEGIGNGDE----FVAVARQVTKHIPVIAIKSGATQAGA 247 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 R ++G + E A + G+ A S + Sbjct: 248 RAASSHTGALAGAEHAYE---AAFDQCGVLRARSMQEL 282 >gi|146304165|ref|YP_001191481.1| CoA-binding domain-containing protein [Metallosphaera sedula DSM 5348] gi|145702415|gb|ABP95557.1| CoA-binding domain protein [Metallosphaera sedula DSM 5348] Length = 660 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 99/263 (37%), Gaps = 24/263 (9%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 + G ++P + V + ++ + ++ + ++I VP + E+ E Sbjct: 34 STFRGKVYPVNNKSE---TIEGVQSYKSLKDIQD--DVDLAIISVPRESVPGVMEEAGEK 88 Query: 94 EIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI 147 + + IT G + K + K R +GPN G+LTPD G + Sbjct: 89 GVRSAIVITSGFREVGEEGEKLEREVASIANKYGIRFLGPNTMGLLTPD--YNGTFAFAD 146 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 ++G + ++ +SG + + + G S V +G + +V++ D T+ Sbjct: 147 VKRGEIALVVQSGGIGAYMLNWAQKSRTGVSFLVSLGNQ--TDVKEYEVIDYLAKDPETK 204 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKG 266 +I + E E +FL + +KP++ G +A + H G++ G Sbjct: 205 AIFVYIEGVSDGE----KFLNVVPEATSRKPVIFIKGGASAQSAEAVKTHTGSLA----G 256 Query: 267 GAEDKINAMKEAGICIAPSPARI 289 E A+K G + Sbjct: 257 SYEVFKAAIKTVGGIFVENLKDF 279 >gi|261822730|ref|YP_003260836.1| GCN5-related N-acetyltransferase [Pectobacterium wasabiae WPP163] gi|261606743|gb|ACX89229.1| GCN5-related N-acetyltransferase [Pectobacterium wasabiae WPP163] Length = 882 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 101/279 (36%), Gaps = 22/279 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AG + + + V + PK V + TVA T + +VI Sbjct: 25 GRAGFLMMKNLLDGHFSGPVLPVTPK------YRAVCGVLAYPTVASLP--TTPDLAVIC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E + ++ ++ P +KA + RL+GPN G+L P Sbjct: 77 TNASRNLTLLEELGQKGCKTVIILSA--PPTQFSELKACAVRYHMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 KG + +S+S ++ + Q G+G S + +G + + L Sbjct: 135 GLNASFSPVPIMKGKLAFISQSAAVSNTILDWAQQRGIGFSYFIALGDSLDIDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +FL R KPI+ +G++ + Sbjct: 193 DFLARDGKTSAILLHLEHIS----DARRFLSASRSASRNKPILVIKSGRS----QQAQQL 244 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G A D A++ AG+ + ++ L Sbjct: 245 LNDQRHGLDAAYD--AAIQRAGLLRVRDTHELFSAVETL 281 >gi|239906640|ref|YP_002953381.1| CoA-binding domain protein [Desulfovibrio magneticus RS-1] gi|239796506|dbj|BAH75495.1| CoA-binding domain protein [Desulfovibrio magneticus RS-1] Length = 701 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 98/274 (35%), Gaps = 25/274 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + + ++PK + +PV + + E + Sbjct: 26 GKVGHTVVANMLEAGYKGTLIPVNPK------ADEILGLPVTKKIEDLPEGLD---MAVI 76 Query: 78 VPPSGAGDAIIESIEA-EIPLIVCITEGIPVLDM------VRVKARLEKSSSRLIGPNCP 130 V P A +E++ ++ V IT G + R+ + ++GPNC Sbjct: 77 VVPVAAVVPSMEALAKRKVRSAVIITAGFKEVGKEGYALEQRLIELCTEHEIAMVGPNCL 136 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G+++ KGS+ S+SG L + E +G S V +G V Sbjct: 137 GLISTHDNNNASFAAGYPEKGSIAFFSQSGALCTAILDWALGENVGFSKFVSLGNKAVI- 195 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 ++LE D T I+ E E A F++ AK ++KP++ +G T Sbjct: 196 -NEGNMLEYLRTDPNTSVILGYIENV----EHGADFIEQAAKVTQEKPVIMIKSGTTTAG 250 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 + I+G + A ++ G+ A Sbjct: 251 AKAASSHTGAIAGSD---QAYTAAFRKTGVIRAN 281 >gi|21233410|ref|NP_639327.1| hypothetical protein XCC3988 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770375|ref|YP_245137.1| hypothetical protein XC_4078 [Xanthomonas campestris pv. campestris str. 8004] gi|21115250|gb|AAM43209.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575707|gb|AAY51117.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 902 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 87/233 (37%), Gaps = 13/233 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 + VI P + + + + +T G+ RV+A R++GP Sbjct: 70 PDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGSGAGSPAARVEATARAKGMRILGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 +C G++ P + + + G + ++S S + V +G S V +G Sbjct: 130 HCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLG--D 187 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 +F D+L+ F D T +I++ E G +A +F+ R KP+V +G+ Sbjct: 188 TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVVKSGRQ 243 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 R +A G A AG+ + + + E LG L Sbjct: 244 ---FRIDPNADTHAQALAGSDAVYGAAFARAGLLRVGALDELFAA-AETLGRL 292 >gi|218688193|ref|YP_002396405.1| putative enzyme with acyl-CoA domain [Escherichia coli ED1a] gi|218425757|emb|CAR06561.1| putative enzyme with acyl-CoA domain [Escherichia coli ED1a] Length = 436 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 91/193 (47%), Gaps = 13/193 (6%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 22 YATIASAKKYIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 80 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 81 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 137 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 138 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 193 Query: 234 GRKKPIVGFVAGK 246 +KP+V G+ Sbjct: 194 ACRKPVVACFLGR 206 >gi|188993575|ref|YP_001905585.1| Putative acetyltransferase (GNAT) family protein [Xanthomonas campestris pv. campestris str. B100] gi|167735335|emb|CAP53549.1| Putative acetyltransferase (GNAT) family protein [Xanthomonas campestris pv. campestris] Length = 902 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 87/233 (37%), Gaps = 13/233 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 + VI P + + + + +T G+ RV+A R++GP Sbjct: 70 PDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGSGAGSPAARVEATARAKGMRILGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 +C G++ P + + + G + ++S S + V +G S V +G Sbjct: 130 HCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLG--D 187 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 +F D+L+ F D T +I++ E G +A +F+ R KP+V +G+ Sbjct: 188 TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVVKSGRQ 243 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 R +A G A AG+ + + + E LG L Sbjct: 244 ---FRIDPNADTHAQALAGSDAVYGAAFARAGLLRVGALDELFAA-AETLGRL 292 >gi|11498792|ref|NP_070021.1| hypothetical protein AF1192 [Archaeoglobus fulgidus DSM 4304] gi|2649402|gb|AAB90053.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 664 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 103/268 (38%), Gaps = 25/268 (9%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P + G + + +V ++ + +VI VP A + + E E + Sbjct: 252 FRGKVYPVNPN---AGEILGYKCYPSVRAIPDK--VDLAVIAVPSKNAIEVVKECAEKGV 306 Query: 96 PLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG-SIF 148 I+ ++ G ++ KS R++GPN GIL P+S Sbjct: 307 KGIIVLSAGFAEGWEQGKELERQIVEIARKSGMRIVGPNTMGILDPESGLTSFFSVLRKI 366 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 +G++G+L++SG + + +G S V IG G ++VL L DE T Sbjct: 367 GQGNIGVLAQSGAVANFIL--LPLWHVGFSKIVAIGNKADVGE--VEVLNFLLKDEKTRV 422 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 + E + + E + KPIV +G+T R+ A IS + Sbjct: 423 VAAYLEGFTNGRK------FYELMKASTKPIVVLKSGRTEAGKRSALSHTASISTSEEIF 476 Query: 269 EDKINAMKEAGICIAPSPARIGRSLVEL 296 E A K+AG+ + + L Sbjct: 477 E---AACKQAGVAKVYDFEELVDAAKAL 501 >gi|110640602|ref|YP_668330.1| YahF/FdrA-like protein [Escherichia coli 536] gi|191173577|ref|ZP_03035103.1| bacterial FdrA protein [Escherichia coli F11] gi|300977143|ref|ZP_07173759.1| bacterial FdrA protein [Escherichia coli MS 200-1] gi|110342194|gb|ABG68431.1| YahF/FdrA-like protein [Escherichia coli 536] gi|190906172|gb|EDV65785.1| bacterial FdrA protein [Escherichia coli F11] gi|300308395|gb|EFJ62915.1| bacterial FdrA protein [Escherichia coli MS 200-1] gi|324010945|gb|EGB80164.1| bacterial FdrA protein [Escherichia coli MS 60-1] Length = 515 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 91/193 (47%), Gaps = 13/193 (6%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKYIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGK 246 +KP+V G+ Sbjct: 273 ACRKPVVACFLGR 285 >gi|21244794|ref|NP_644376.1| hypothetical protein XAC4077 [Xanthomonas axonopodis pv. citri str. 306] gi|21110493|gb|AAM38912.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 902 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 49/234 (20%), Positives = 89/234 (38%), Gaps = 15/234 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 + VI P + + + + +T G+ P R++A R++GP Sbjct: 70 PDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGSGPGSPAARMEAAARAKGMRILGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 +C G++ P + + + G + ++S S + V +G S V +G Sbjct: 130 HCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLG--D 187 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 +F D+L+ F D T +I++ E G +A +F+ R KP+V +G+ Sbjct: 188 TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVVKSGRQ 243 Query: 248 APPG-RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 HA A+ G A AG+ + + + E LG L Sbjct: 244 YRINPNADTHAQALA----GSDAVYGAAFARAGLLRVGALDELFAA-AETLGRL 292 >gi|26246339|ref|NP_752378.1| hypothetical protein c0441 [Escherichia coli CFT073] gi|227884661|ref|ZP_04002466.1| bacterial FdrA protein [Escherichia coli 83972] gi|300977217|ref|ZP_07173778.1| bacterial FdrA protein [Escherichia coli MS 45-1] gi|301045946|ref|ZP_07193131.1| bacterial FdrA protein [Escherichia coli MS 185-1] gi|26106737|gb|AAN78922.1|AE016756_105 Hypothetical protein yahF [Escherichia coli CFT073] gi|227838262|gb|EEJ48728.1| bacterial FdrA protein [Escherichia coli 83972] gi|300302063|gb|EFJ58448.1| bacterial FdrA protein [Escherichia coli MS 185-1] gi|300409910|gb|EFJ93448.1| bacterial FdrA protein [Escherichia coli MS 45-1] gi|307552245|gb|ADN45020.1| FdrA-like protein [Escherichia coli ABU 83972] gi|315295190|gb|EFU54525.1| bacterial FdrA protein [Escherichia coli MS 153-1] Length = 515 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKYIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIYEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVACFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|320449194|ref|YP_004201290.1| 6-carboxyhexanoate-CoA ligase [Thermus scotoductus SA-01] gi|320149363|gb|ADW20741.1| 6-carboxyhexanoate-CoA ligase [Thermus scotoductus SA-01] Length = 765 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 93/250 (37%), Gaps = 19/250 (7%) Query: 36 VVGGIHP-----KKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIES 90 G ++P K + V + +VI VP +A+ S Sbjct: 233 FQGPVYPVNEAIGKEGGTVGPLLA----YPRVESIP--GPVDLAVIAVPKERVWEALEAS 286 Query: 91 IEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD-SCKIGIMPGSIFR 149 + V +T G + + + + RL+GP G++ ++ + + Sbjct: 287 GRRGVRASVVLTTGFQDQEARELADKARRLGMRLLGPGSLGLVHTHPEVRLAAGLAPLPK 346 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 G + I S+SGTL + GLG S+ V +G + D+L+ + DE T I Sbjct: 347 PGPLAISSQSGTLGRAVMAYAEGMGLGISSFVSLGAKADISSN--DLLQFWEEDERTRVI 404 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 ++ E G+ +F + + G+KKPI+ + AG + + A Sbjct: 405 LLYLESFGNP----RRFSRLARRIGKKKPILAVHPSRDPLVRTLFAQAGVIRANSLEEAF 460 Query: 270 DKINAMKEAG 279 D + A+ G Sbjct: 461 D-VAALLALG 469 >gi|297520254|ref|ZP_06938640.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli OP50] Length = 430 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ ++ +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 16 YATIASAKKHIPESSLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 74 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 75 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 131 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 132 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 187 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 188 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGVK 230 >gi|146312785|ref|YP_001177859.1| FdrA family protein [Enterobacter sp. 638] gi|145319661|gb|ABP61808.1| FdrA family protein [Enterobacter sp. 638] Length = 513 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 101/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK +N ++I V A +++E + ++ ++ + + D + +K Sbjct: 99 YATLASAKTHRPESNLAIISVNGLFAAREARQALENGLN-VMLFSDNVSLDDELALKQLA 157 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G +GI+ SGT + E + + G G Sbjct: 158 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGPIGIVGASGTGSQELSARIHEFGGGI 214 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D +++ AD+AT+ I ++ + + E R Sbjct: 215 SQLIGTGGRDLSEKIGGLMMLDAIDMLEADDATQVITLISKPPAPSVAEKVL----ARAR 270 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ APP G + +G E + A+ GI Sbjct: 271 ACRKPVVVCFLGRNAPPADEDG-----LQFARGTKEAALKAVLLTGIK 313 >gi|84622094|ref|YP_449466.1| hypothetical protein XOO_0437 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84366034|dbj|BAE67192.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 902 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 88/233 (37%), Gaps = 13/233 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 + VI P + + + + +T G+ P R++A R++GP Sbjct: 70 PDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGRGPGSPAARMEAAARAKGMRILGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 +C G++ P + + + G + ++S S + V +G S V +G Sbjct: 130 HCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLG--D 187 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 +F D+L+ F D T +I++ E G +A +F+ R KP+V +G+ Sbjct: 188 TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVVKSGRQ 243 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 R +A G A AG+ + + + E LG L Sbjct: 244 ---FRINPNADTHAQALAGSDAVYGAAFARAGLLRVGALDELFAA-AETLGRL 292 >gi|323969026|gb|EGB64338.1| FdrA protein [Escherichia coli TA007] Length = 515 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 101/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ + ++ ++ + + D + +K Sbjct: 101 YATIASAKKHAPESNLAVISVNGLFAAREARQALQNNLN-VMLFSDNVSLEDELELKHLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIIGASGTGSQELSVRIHEFGGGI 216 Query: 178 STAVGIGGDPVK----GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + AD TE I ++ + A A + L+ R Sbjct: 217 SQLIGTGGRDMSEKIGGLMMLDAISMLEADPQTEIITLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 KP+V G+ + P G + +G E + A+ G+ Sbjct: 273 TCHKPVVVCFLGRESTPADEEG-----LQFARGTKEAALKAVLLTGVK 315 >gi|323097755|emb|CBJ18439.1| ATP citrate lyase [uncultured bacterium] Length = 248 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 6/124 (4%) Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + IGGD G+ FID L + + ++++GE+GG+ E + + +K KPI Sbjct: 1 CIAIGGDRFVGSVFIDNLLRMQENPDVKYMILLGEVGGTEEYKVIEAVK---SGKITKPI 57 Query: 240 VGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + G A G GHAGA +G AE K NAMKEAGI + + + + E+ Sbjct: 58 IAWCIGTIAKYYDSGVQFGHAGASANGEMETAEYKNNAMKEAGIHVPDTFNDLPAKIKEV 117 Query: 297 LGSL 300 SL Sbjct: 118 YESL 121 >gi|56476649|ref|YP_158238.1| Acetyl-CoA synthetase [Aromatoleum aromaticum EbN1] gi|56312692|emb|CAI07337.1| predicted Acetyl-CoA synthetase [Aromatoleum aromaticum EbN1] Length = 727 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 95/262 (36%), Gaps = 24/262 (9%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P + V + T+ + + ++I P + + + + Sbjct: 47 YPGAIYPINPK---VDNVLGVRTYATLDDIP--GPVDLALICTPAATVPGLVADCGRKGV 101 Query: 96 PLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 + G +V A + RLIGPN G+ K+ ++ + + Sbjct: 102 KGAAILASGFRETGPAGARLEQQVLAAAREGGVRLIGPNTSGMFNLHK-KVNLLALANVK 160 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEG-LGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 G++G +S+SG + V + G +G ST VG G G F D L D T Sbjct: 161 PGNIGFISQSGNMLLSLVLEAEHNGHVGFSTYVGPGNQTDIG--FNDYLRYLGEDPDTRV 218 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGG 267 E + +FL + + KP+V + +G T + H GA+ G Sbjct: 219 ATFYVEGF----RDGQRFLHNAREITAVKPVVVYKSGATEQGKKAASSHTGALA----GS 270 Query: 268 AEDKINAMKEAGICIAPSPARI 289 ++ +++ G+ + I Sbjct: 271 YAMTVDLLRQVGVSVVQHSNEI 292 >gi|193064096|ref|ZP_03045181.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli E22] gi|192929331|gb|EDV82940.1| CoA binding domain/acetyltransferase domain protein [Escherichia coli E22] Length = 886 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALLEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQL----CDARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 TAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|84060830|ref|YP_444032.1| putative oxidoreductase subunit [Escherichia coli] gi|83743410|gb|ABC42288.1| putative oxidoreductase subunit [Escherichia coli] Length = 450 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 101/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ + ++ ++ + + D + +K Sbjct: 36 YATIASAKKHAPESNLAVISVNGLFAAREARQALQNNLN-VMLFSDNVSLEDELELKHLA 94 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 95 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIIGASGTGSQELSVRIHEFGGGI 151 Query: 178 STAVGIGGDPVK----GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + AD TE I ++ + A A + L+ R Sbjct: 152 SQLIGTGGRDMSEKIGGLMMLDAISMLEADPQTEIITLISKPPAPAV--ARKVLE--RAR 207 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 KP+V G+ + P G + +G E + A+ G+ Sbjct: 208 TCHKPVVVCFLGRESTPADEEG-----LQFARGTKEAALKAVLLTGVK 250 >gi|315300332|gb|EFU59568.1| bacterial FdrA protein [Escherichia coli MS 16-3] Length = 497 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 101/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ + ++ ++ + + D + +K Sbjct: 83 YATIASAKKHAPESNLAVISVNGLFAAREARQALQNNLN-VMLFSDNVSLEDELELKHLA 141 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 142 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIIGASGTGSQELSVRIHEFGGGI 198 Query: 178 STAVGIGGDPVK----GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + AD TE I ++ + A A + L+ R Sbjct: 199 SQLIGTGGRDMSEKIGGLMMLDAISMLEADPQTEIITLISKPPAPAV--ARKVLE--RAR 254 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 KP+V G+ + P G + +G E + A+ G+ Sbjct: 255 TCHKPVVVCFLGRESTPADEEG-----LQFARGTKEAALKAVLLTGVK 297 >gi|331681713|ref|ZP_08382346.1| putative oxidoreductase subunit [Escherichia coli H299] gi|331080915|gb|EGI52080.1| putative oxidoreductase subunit [Escherichia coli H299] Length = 515 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 13/197 (6%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVTVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPP 250 +KP+V G+ P Sbjct: 273 ACRKPVVVCFLGRGETP 289 >gi|188578925|ref|YP_001915854.1| acetyltransferase, gnat family [Xanthomonas oryzae pv. oryzae PXO99A] gi|188523377|gb|ACD61322.1| acetyltransferase, gnat family [Xanthomonas oryzae pv. oryzae PXO99A] Length = 902 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 49/234 (20%), Positives = 89/234 (38%), Gaps = 15/234 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 + VI P + + + + +T G+ P R++A R++GP Sbjct: 70 PDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGRGPGSPAARMEAAARAKGMRILGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 +C G++ P + + + G + ++S S + V +G S V +G Sbjct: 130 HCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLG--D 187 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 +F D+L+ F D T +I++ E G +A +F+ R KP+V +G+ Sbjct: 188 TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVVKSGRQ 243 Query: 248 APPG-RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 HA A+ G A AG+ + + + E LG L Sbjct: 244 YRINPNADTHAQALA----GSDAVYGAAFARAGLLRVGALDELFAA-AETLGRL 292 >gi|58580095|ref|YP_199111.1| hypothetical protein XOO0472 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58424689|gb|AAW73726.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 902 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 88/233 (37%), Gaps = 13/233 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 + VI P + + + + +T G+ P R++A R++GP Sbjct: 70 PDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGRGPGSPAARMEAAARAKGMRILGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 +C G++ P + + + G + ++S S + V +G S V +G Sbjct: 130 HCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLG--D 187 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 +F D+L+ F D T +I++ E G +A +F+ R KP+V +G+ Sbjct: 188 TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVVKSGRQ 243 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 R +A G A AG+ + + + E LG L Sbjct: 244 ---FRINPNADTHAQALAGSDAVYGAAFARAGLLRVGALDELFAA-AETLGRL 292 >gi|154245686|ref|YP_001416644.1| GCN5-related N-acetyltransferase [Xanthobacter autotrophicus Py2] gi|154159771|gb|ABS66987.1| GCN5-related N-acetyltransferase [Xanthobacter autotrophicus Py2] Length = 903 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 53/286 (18%), Positives = 100/286 (34%), Gaps = 24/286 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G G + ++PK+ + + + +VA+ A + +V+ Sbjct: 25 GSIGAVIARNLFEAGFEGPILTVNPKERAIRSSLN------YASVADLP--IAVDLAVVA 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEG-------IPVLDMVRVKARLEKSSSRLIGPNCP 130 PP I + E V + G + R++GPN Sbjct: 77 APPDTVPAIITQLGEKGCRAAVVLRAGYGPGEQIETAQQRQAMLDAARPYLLRVLGPNGL 136 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G ++ + + KG V +S+SG +T + G G S V +G Sbjct: 137 GFISTRPHINASIAHLMPAKGDVAFVSQSGAMTSAVLDWAHTRGFGFSHVVSLGESA--D 194 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 +F D+L+ D T +I++ E ++A +F+ R KP++ AG+ A Sbjct: 195 VDFGDMLDYLALDNTTRAILLYVEHV----KDARKFMSAGRIAARSKPVIVIKAGRGAAG 250 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 R V++G + A + AG+ + ++ L Sbjct: 251 ARAAQSHTGVLAGSDLVYD---AAFRRAGMLRVHELRELFEAVSTL 293 >gi|194438180|ref|ZP_03070272.1| bacterial FdrA protein [Escherichia coli 101-1] gi|253774691|ref|YP_003037522.1| FdrA family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160395|ref|YP_003043503.1| putative acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli B str. REL606] gi|300927644|ref|ZP_07143214.1| bacterial FdrA protein [Escherichia coli MS 187-1] gi|194422844|gb|EDX38839.1| bacterial FdrA protein [Escherichia coli 101-1] gi|253325735|gb|ACT30337.1| FdrA family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972296|gb|ACT37967.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli B str. REL606] gi|253976505|gb|ACT42175.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli BL21(DE3)] gi|300464316|gb|EFK27809.1| bacterial FdrA protein [Escherichia coli MS 187-1] gi|313848542|emb|CAQ30796.2| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli BL21(DE3)] gi|323963491|gb|EGB59052.1| FdrA protein [Escherichia coli H489] gi|323972496|gb|EGB67703.1| FdrA protein [Escherichia coli TA007] Length = 515 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 103/228 (45%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ ++ +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESSLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRVETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|331697761|ref|YP_004334000.1| GCN5-like N-acetyltransferase [Pseudonocardia dioxanivorans CB1190] gi|326952450|gb|AEA26147.1| GCN5-related N-acetyltransferase [Pseudonocardia dioxanivorans CB1190] Length = 951 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 97/266 (36%), Gaps = 25/266 (9%) Query: 35 QVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE 94 G ++P V + +V E + + +V+ VP +G + + + Sbjct: 289 NFTGPVYPVNPDAR---SVRGVRAYASVTEIPD--DVDLAVVAVPAAGIDEVMDSCLAKG 343 Query: 95 IPLIVCITEGIP------VLDMVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGS 146 + ++ ++ G ++ R+ R++GPN G+ + + Sbjct: 344 VKALIVVSSGFADAGSHGLVAERRMVEAARAHGMRVVGPNALGVANTAAGVRLNATLAPA 403 Query: 147 IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 + G VG S+SG L + ++ GLG ST V G D+L+ + +D T Sbjct: 404 LPGAGRVGFFSQSGALGIALLQAATERGLGLSTFVSAGNRA--DVSGNDLLQYWQSDPDT 461 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKG 266 + +++ E G+ + + R P+V +G+ P A + Sbjct: 462 DVVLLYLETFGNPRKFGRL----ARRLARTTPVVAVKSGRRVPLPARSSRAVPI------ 511 Query: 267 GAEDKINAMKEAGICIAPSPARIGRS 292 +++G+ + A++ + Sbjct: 512 DDSSVQALFEQSGVIRVATVAQLFDT 537 >gi|157382720|gb|ABV48798.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA30] Length = 348 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 52/121 (42%) Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + IGGD GT+F+D + + + + +V++GE+GG+ E + A+ +K+ Sbjct: 1 CIAIGGDRYPGTDFLDHMLRYEQNPQVKFMVLLGEVGGTLELKVAEAIKEGKITKPVIAW 60 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 K GHAGA A+ K +++AG + S + + + Sbjct: 61 CIGTISKHFGGEVQFGHAGAKAGAETETADAKNEILRQAGAYVPKSFNELPELIKGVYEE 120 Query: 300 L 300 L Sbjct: 121 L 121 >gi|296104338|ref|YP_003614484.1| FdrA family protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058797|gb|ADF63535.1| FdrA family protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 513 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 52/227 (22%), Positives = 101/227 (44%), Gaps = 18/227 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK +N +VI V A +++E ++ ++ ++ + + D + +K Sbjct: 99 YATLASAKAHRPDSNLAVISVNGMFAAREARKALENDLN-VMLFSDNVSLDDELALKQLA 157 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + G+ + R+GS+GI+ SGT + E + + G G Sbjct: 158 HQKGLLMMGPDCGTATINGA---GLCFANAVRRGSIGIVGASGTGSQELSVRIHEFGGGV 214 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D +++ AD+AT+ I ++ + A E R Sbjct: 215 SQLIGTGGRDLSEKIGGLMMLDAIDMLEADDATQVIALISKPPAPAVAEKVL----ARAR 270 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +KP++ G+ PP G + +G E + A+ GI Sbjct: 271 ACRKPVIACFLGRNEPPADEDG-----LQFARGTKEAALKAVLLTGI 312 >gi|332664762|ref|YP_004447550.1| GCN5-like N-acetyltransferase [Haliscomenobacter hydrossis DSM 1100] gi|332333576|gb|AEE50677.1| GCN5-related N-acetyltransferase [Haliscomenobacter hydrossis DSM 1100] Length = 890 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 97/236 (41%), Gaps = 16/236 (6%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEG----IPVLDMVRVKAR--LEKSSS 122 T + ++I PP + E +A + + + VL R KA+ + Sbjct: 67 TRVDLAMISTPPDQWEAHLNECGKAGVGSVALVASDQFYPEEVLHAYRQKAQQICRQHQI 126 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GPN G + P + G++ ++S+SG L + + ++ +G S VG Sbjct: 127 RMLGPNSMGFIAPHQRLNASFSTKMPLPGNLALISQSGALLSSILDWSVEQRVGFSYVVG 186 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 G + +F D+++ F +D T I++ E + A +F+ R KPI+ Sbjct: 187 PG--AMTNIDFADLIDYFGSDSQTSCILIYMESL----KNARRFMSAARAFARYKPIIVL 240 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG++ + A ++G + AG+ + A++ +L + L Sbjct: 241 KAGRSEEGVKAAFSHTATLTGNDAAFDAAFR---RAGVIRVNTVAQL-FNLAQALA 292 >gi|295097254|emb|CBK86344.1| Succinyl-CoA synthetase, alpha subunit [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 513 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 52/228 (22%), Positives = 101/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK +N +VI V + A +++E ++ ++ ++ + + D + +K Sbjct: 99 YATIASAKTHRPDSNLAVISVNGTFAAREARQALENDLN-VMLFSDNVSLDDELALKQLA 157 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + G+ + R+G +GI+ SGT + E + + G G Sbjct: 158 HEKGLLMMGPDCGTAIINGA---GLCFANAVRRGQIGIVGASGTGSQELSVRIHEFGGGV 214 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D +++ AD+AT I ++ + A E R Sbjct: 215 SQLIGTGGRDLSEKIGGLMMLDAIDMLEADDATRVIALISKPPAPAVAEKVL----ARAR 270 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ PP G + +G E + A+ GI Sbjct: 271 ACRKPVVVCFLGRNEPPADEDG-----LQFARGTKEAALKAVLLTGIK 313 >gi|268323256|emb|CBH36844.1| putative acetyl-CoA synthetase, alpha subunit [uncultured archaeon] Length = 455 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 104/239 (43%), Gaps = 29/239 (12%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAI--IESIEAEIPLIVCITEGIPV------LDM 110 ++++AE K+ + +++ +P S A+ +E + + ++ G Sbjct: 61 YSSMAEIKD--DIDVAILALPASKVLGALKPVE----NVKGAIIVSAGFKEVGDSGRQME 114 Query: 111 VRVKARLEKSSSRLIGPNCPGILT----PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 +K + + R+IGPNC GI D+ I + ++G + IL++SG+ Sbjct: 115 EALKEIVARKGIRIIGPNCLGIYDTVSKMDTFFIPVERVKRLKRGRISILTQSGSFAEMI 174 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 V + + EG+G + V G G + L + D+AT+ +V+ E ++ +F Sbjct: 175 VDELASEGIGVARIVSYGNRVDVGET--ECLNFLVDDDATKVVVLYMESV----DDGRRF 228 Query: 227 LKDEAKRGRKKPIVGFVAG-KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 ++ ++ ++KP+V G + A H GA+ G E A K+AGI Sbjct: 229 VEVASRCTKRKPVVALKVGKREAGVHAAKSHTGAI----SGRYEIYRAAFKKAGIIEVD 283 >gi|331651237|ref|ZP_08352262.1| putative oxidoreductase subunit [Escherichia coli M718] gi|331050978|gb|EGI23030.1| putative oxidoreductase subunit [Escherichia coli M718] Length = 515 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 49/228 (21%), Positives = 101/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ +G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVHRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE I ++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|293606624|ref|ZP_06688980.1| 6-carboxyhexanoate-CoA ligase [Achromobacter piechaudii ATCC 43553] gi|292815009|gb|EFF74134.1| 6-carboxyhexanoate-CoA ligase [Achromobacter piechaudii ATCC 43553] Length = 717 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 94/262 (35%), Gaps = 27/262 (10%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P G +P + +V + A +++ VP S A+ + + Sbjct: 48 YAGAVYPINPK---GGVIQGLPAYASVRDTP--VAPELAILAVPASATPAALRDCAARGV 102 Query: 96 PLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP----G 145 + ++ G + + R++GPNC G + IG Sbjct: 103 KAAIVLSAGFTEAGPDGAALQAELVHIAREHGMRVLGPNCLGAVNVADRLIGSFSIALEE 162 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 + G VGI+S+SG + + ++ G+G S + G + + D + D Sbjct: 163 HMPPAGHVGIVSQSGNVGSHTMQSVARRGMGVSRFIATGNEA--DVDVADGIAALADDPD 220 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 T I+ E +A + + R R KP++ G T A A +G Sbjct: 221 THIILCCMETC----RDATKLISALRGARERGKPVIVLKIGSTEKGQ----QAAASHTGA 272 Query: 265 KGGAEDKINA-MKEAGICIAPS 285 G++ I+A + G+ S Sbjct: 273 LTGSDAVIDAVFRRHGVLRVRS 294 >gi|224371769|ref|YP_002605933.1| SucD4 [Desulfobacterium autotrophicum HRM2] gi|223694486|gb|ACN17769.1| SucD4 [Desulfobacterium autotrophicum HRM2] Length = 897 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 94/273 (34%), Gaps = 33/273 (12%) Query: 36 VVGGIHPKKGSTYWTG-------GNVNVPV---FTTVAEAKERTA-------ANASVIYV 78 + P G PV F T+ K + +VI Sbjct: 18 IGASQTPGTIGRVVAGNLFSAGFKGEIFPVSTEFKTIEGVKTYPDVASLPRAPDLAVIVT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIP-------VLDMVRVKARLEKSSSRLIGPNCPG 131 PP + I + + V +T+G + + A R++GP+ G Sbjct: 78 PPDTIPEMIAQLGKRGTRAAVVLTDGFTNDTDPHHQELNMAMLAAARPHLFRIVGPSSLG 137 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P + G++ ++++SGT+ + + +G+G S V +G + Sbjct: 138 VMVPGIGLNASFGHAPPLSGNLALVAQSGTVLTAVLDWGTSQGIGFSKCVALGE--MADG 195 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D +T++I++ E A +F+ R KP++ AG+ Sbjct: 196 DFGDMLDYLAYDYSTQAILLYIEEITG----ARKFISAARAVARIKPVIVVKAGRHGENV 251 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 +G + A + G+ Sbjct: 252 LAPASHTGFPTGSDAFYD---AAFRRTGMLRVK 281 >gi|37525239|ref|NP_928583.1| hypothetical protein plu1272 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784666|emb|CAE13566.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 880 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 96/278 (34%), Gaps = 23/278 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +AG+ + + I P + G + P + + +VI Sbjct: 26 RAGSVMMRNLLAGGFAGPILPITPN---SRSVQGVLAYPSIDKLPIT-----PDLAVICT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 + + + ++ ++ P +K + S RL+GPN G+L P Sbjct: 78 HHRRNLQCLEQLGQLGCKTVIILSS--PTSQFAELKQCCQHYSIRLLGPNSLGVLAPWQG 135 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 KG + +S+S ++ + G+G S + +G + +L+ Sbjct: 136 LNASFSPVPILKGKLAFISQSAAVSNTILDWAKHRGVGFSYFIALGDSVDIDIDH--LLD 193 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E +A +FL R KPI+ +G+T + +G Sbjct: 194 FLARDSKTSAILLYLEHI----HDARRFLSASRSASRNKPILVVKSGRTKRAQKLLGEQQ 249 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + A++ AG+ + ++ L Sbjct: 250 NLDA-------AYDAAIQRAGLLRVQDTHEMFSAVETL 280 >gi|295696582|ref|YP_003589820.1| CoA-binding domain protein [Bacillus tusciae DSM 2912] gi|295412184|gb|ADG06676.1| CoA-binding domain protein [Bacillus tusciae DSM 2912] Length = 799 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 95/248 (38%), Gaps = 24/248 (9%) Query: 57 PVFTTVAEAKERT-------AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 PV +VA + +V+ VPP + + + + ++ IT G+P + Sbjct: 226 PVARSVAGVRAFPSLRELPEPVELAVVAVPPDQVSPVVDDCVTTGVRSVIIITSGLPEEE 285 Query: 110 MVRVKARLEKSSSRLIG------PNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGT 161 V E ++ PN G++ P R+G++ I S SG Sbjct: 286 EKGVPTPAELAARLRRAGARLLGPNSLGLVNTDPKVRLNASFAPRFPRRGALAIASHSGA 345 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 L + + G+G S+ +G D+L+ + D T+ I + E G+ Sbjct: 346 LGITILEYAGRMGIGVSSFASMGVKA--DVSGNDLLQYWEDDPETDMIALYLESFGNP-- 401 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +F + + RKKPIV V G + G + G+V+ + D + ++AGI Sbjct: 402 --RKFSRITRRITRKKPIVA-VKGASTESGTAVSLTGSVLPRARDVLVDAL--FRQAGII 456 Query: 282 IAPSPARI 289 + + Sbjct: 457 RVNTLQEM 464 >gi|82523922|emb|CAI78644.1| Acyl-CoA synthetase (NDP forming) [uncultured delta proteobacterium] Length = 504 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 96/249 (38%), Gaps = 23/249 (9%) Query: 50 TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 G + + ++ +V + ++ + + +P + ++ + + I T G ++ Sbjct: 77 GGKIMGMKIYKSVKDIPDK--IDFVISAIPSRYTPQLMADAAQKGVKAIHFFTSGFSEIE 134 Query: 110 MVRVK-------ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK--GSVGILSRSG 160 V K AR + R++GPNC G+ P G+ + F K G V ++S+SG Sbjct: 135 NVEGKHLQADIIARAKAGGIRVVGPNCLGLYCPSG---GLSFNADFDKTSGPVAMISQSG 191 Query: 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 V + + G+ S + +G D LE DE T+ I E Sbjct: 192 GNAAHCVQEGNDRGVLFSKVISMGNGA--DLNESDYLEYLTHDEETKIITAYIE----GV 245 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 E +FL+ + KP++ G + A ++G E A+++AG+ Sbjct: 246 REGPRFLRALKSATKSKPVIILKVGTSVSGAEAAVSHTAAMAGSNQVWE---GALRQAGV 302 Query: 281 CIAPSPARI 289 S + Sbjct: 303 IRTSSIEEM 311 >gi|283835366|ref|ZP_06355107.1| putative oxidoreductase subunit [Citrobacter youngae ATCC 29220] gi|291068533|gb|EFE06642.1| putative oxidoreductase subunit [Citrobacter youngae ATCC 29220] Length = 515 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 101/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ + ++ ++ + + D + +K Sbjct: 101 YATLASAKKHVPDSNLAVISVNGLFAAREARQALQNNLN-VMLFSDNVSLEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGI 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + AD TE I ++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLEADPQTEIIALISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 KP+V G+ A P G + +G E + A+ G+ Sbjct: 273 ACHKPVVVCFLGREAAPADEKG-----LQFARGTKEAALKAVLLTGVK 315 >gi|157144483|ref|YP_001451802.1| hypothetical protein CKO_00200 [Citrobacter koseri ATCC BAA-895] gi|157081688|gb|ABV11366.1| hypothetical protein CKO_00200 [Citrobacter koseri ATCC BAA-895] Length = 886 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 102/280 (36%), Gaps = 27/280 (9%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD 136 S A++E++ E + ++ P + A ++ RL+GPN G+L P Sbjct: 77 TNASR-NIALLEALGEKGCKTCIILSA--PAAQHAELLACAQRYKMRLLGPNSLGLLAPW 133 Query: 137 SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 ++G + +S+S ++ + Q +G S + +G + ++ Sbjct: 134 QGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--EL 191 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGH 256 L+ D T +I++ E +A +F+ R KPI+ +G++ R Sbjct: 192 LDYLARDSKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRSPAAQR---- 243 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +++ G A++ AG+ + ++ L Sbjct: 244 ---LLNTSVGMDPAWDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|119946003|ref|YP_943683.1| GCN5-related N-acetyltransferase [Psychromonas ingrahamii 37] gi|119864607|gb|ABM04084.1| GCN5-related N-acetyltransferase [Psychromonas ingrahamii 37] Length = 897 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 89/248 (35%), Gaps = 18/248 (7%) Query: 57 PVFTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 P +++V +VI S D + E + +T Sbjct: 49 PKYSSVHGVLAYKDISQLPITPELAVICTNESRITDILQALAEKGCSRAIVVTTEKDQQI 108 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 V ++ RL+G + GI+ P + + G++ +S+S + + Sbjct: 109 ADAVYKTAKELGIRLLGMSSIGIINPYTKLNASLAHCNALPGNIAFISQSAAVCTSILDW 168 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + +G+G S + IG F ++L+ D T+SI++ + +A FL Sbjct: 169 ANSKGIGFSAFISIGDGQ--DISFAELLDYLARDAKTQSILLYIDSIS----DARAFLSA 222 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPAR 288 + K +V AG++ + A A+ S G+ G + A K G+ Sbjct: 223 ARAISQHKSVVVIKAGRSFLGAK----AAALHSNGQYGHDRVYDAAFKRVGMLRVYDFHE 278 Query: 289 IGRSLVEL 296 + ++ L Sbjct: 279 LFAAVETL 286 >gi|261212350|ref|ZP_05926635.1| protein acetyltransferase [Vibrio sp. RC341] gi|260838281|gb|EEX64937.1| protein acetyltransferase [Vibrio sp. RC341] Length = 893 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 104/300 (34%), Gaps = 35/300 (11%) Query: 22 TFHTEQAIL-YCQTQVVGGIHPKKGSTYW-------TGGNVNVPV---FTTVAEAKERTA 70 H Q + + I P + +PV + +V Sbjct: 1 MNHLNQLLKPKSVAVIGASIRPFRAGNIVMKNLLQGGFDGAIMPVTPYYPSVCGVLAYKT 60 Query: 71 -------ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARL 117 + +++ S + + + ++ ++ + + A Sbjct: 61 ISDLPIVPDIAILCTHASRNVTLFKQLADKGVKQVIVLSSDMYSLDAQGEEYQAQCMAVA 120 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + R++GPN G++ P G KG++ +S+S + + + +G+G Sbjct: 121 KPVGMRILGPNSLGLMLPWIQFNGSFSPVSALKGNIAFISQSAAVCTTILDWANDKGIGF 180 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S + +G +F D+L+ D+ T++I++ + +A +F+ R + Sbjct: 181 SAFISLGNA--SDVDFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNR 234 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 I+ G+T + A + +GG + +A++ G+ + + ++ L Sbjct: 235 RILVLKGGRT----KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|254167991|ref|ZP_04874839.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Aciduliprofundum boonei T469] gi|289595997|ref|YP_003482693.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Aciduliprofundum boonei T469] gi|197623034|gb|EDY35601.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Aciduliprofundum boonei T469] gi|289533784|gb|ADD08131.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Aciduliprofundum boonei T469] Length = 711 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 97/266 (36%), Gaps = 24/266 (9%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK + + +V + ++ + ++I VP E + + + Sbjct: 44 PVNPK------ADEVAGLKCYHSVLDIPDK--VDIALIVVPAKLVPAVTEECGKKGVKGL 95 Query: 99 VCITEGIPVLDMVRVKAR----LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 V I G + ++ K R++GPN GI+ + G Sbjct: 96 VIIASGFSEVGREDLEREVVDIAHKYGMRILGPNVVGIMNNPLHMNASFGPYLPYPGKAA 155 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++S+SG L +T + +G S + IG + +F D++ F DE T I + E Sbjct: 156 MISQSGALLIAMDARTWVDKVGISHMISIGN--MADLDFGDLINYFNKDEDTNVISLYIE 213 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 ++ +FL A + KKPI+ AG + ++G E A Sbjct: 214 ----GVKDGRKFL--NACKNSKKPIIALKAGTSKRGAAAAASHTGSLAGSTKIYE---AA 264 Query: 275 MKEAGICIAPSPARIG-RSLVELLGS 299 K+ + A + + ++ L Sbjct: 265 FKQGHVVWAENLDALFDETMALALQK 290 >gi|330834697|ref|YP_004409425.1| CoA-binding domain-containing protein [Metallosphaera cuprina Ar-4] gi|329566836|gb|AEB94941.1| CoA-binding domain-containing protein [Metallosphaera cuprina Ar-4] Length = 660 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 98/263 (37%), Gaps = 24/263 (9%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 + G ++P + G V F ++ + ++ + V+ VP + + E+ E Sbjct: 34 STFRGKVYPVNNKSEVIEG---VKSFKSLKDIQD--DIDLVVVSVPRESVKEVMEEAGEK 88 Query: 94 EIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI 147 + + IT G + + K R +GPN G+LTPD G + Sbjct: 89 NVKSAIVITSGFREVGEDGERLEKELVEVAHKHGIRFLGPNTMGLLTPD--YNGTFAFAD 146 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 R+G + ++ +SG + + + G S V +G ++++ D T+ Sbjct: 147 VRRGEIALVVQSGGIGAYMLNWAQRSRTGISFLVSLGNQ--SDVREYEIIDYLSRDPETK 204 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKG 266 +I + E E +FL+ +KP++ G TA + H G++ G Sbjct: 205 AIFVYIEGISDGE----KFLQTMPDATSRKPVIFIKGGATAQSAEAVKTHTGSLA----G 256 Query: 267 GAEDKINAMKEAGICIAPSPARI 289 E A++ G + Sbjct: 257 SYEIFKAAIRTVGGIFVENLRDF 279 >gi|320197223|gb|EFW71839.1| Putative oxidoreductase subunit [Escherichia coli WV_060327] Length = 515 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 91/193 (47%), Gaps = 13/193 (6%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKYIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGK 246 +KP+V G+ Sbjct: 273 ACRKPVVACFLGR 285 >gi|91203594|emb|CAJ71247.1| similar to acetyl-CoA synthetase (ADP-forming) alpha subunit [Candidatus Kuenenia stuttgartiensis] Length = 462 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 63/307 (20%), Positives = 112/307 (36%), Gaps = 27/307 (8%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M + + ++ ++ G T K G+ G I+P G P + Sbjct: 7 MDVFFNPSSVAII-GATEKTGSVPGIILKNLLDMGFAGRIYPVNPKYREVFGLQCFPALS 65 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVK 114 ++E +VI +P S + + + + + V I+ G ++ Sbjct: 66 DISEEIA-----LTVIAIPASFVLEIVKQQAQKGVHYAVIISAGFREMGAEGIQMEEDIR 120 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPG----SIFRKGSVGILSRSGTLTYEAVFQT 170 +++ R+IGPNC G+L + + ++G++ ILS+SG + Sbjct: 121 KVALENNIRIIGPNCLGVLDNYANFTTSFLSWERITKPKRGALSILSQSGAFAITVLDLA 180 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 +QEG+G + V G G D+L D T+ + + E + +F++ Sbjct: 181 AQEGIGIAKMVNYGNRMDVGES--DLLPFLKEDHHTKVVAIYMESV----DHGRRFIEAA 234 Query: 231 AKRGRKKPIVGF-VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 R+KPIV V A H GA+ G E A +AGI A Sbjct: 235 KACSREKPIVALKVGKGAAGVAAAKSHTGAIA----GNYEIYKAAFLKAGIIEANGLEEF 290 Query: 290 GRSLVEL 296 + L Sbjct: 291 IDGIKAL 297 >gi|237729817|ref|ZP_04560298.1| FdrA family protein [Citrobacter sp. 30_2] gi|226908423|gb|EEH94341.1| FdrA family protein [Citrobacter sp. 30_2] Length = 515 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 101/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ + ++ ++ + + D + +K Sbjct: 101 YATLASAKKHVPESNLAVISVNGLFAAREARQALQNNLN-VMLFSDNVSLEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIIGASGTGSQELSVRIHEFGGGI 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + AD TE I ++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLEADPQTEIIALISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 KP+V G+ A P G + +G E + A+ G+ Sbjct: 273 ACHKPVVVCFLGREAAPADEKG-----LQFARGTKEAALKAVLLTGVK 315 >gi|284991969|ref|YP_003410523.1| CoA-binding domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284065214|gb|ADB76152.1| CoA-binding domain protein [Geodermatophilus obscurus DSM 43160] Length = 902 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 105/280 (37%), Gaps = 27/280 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + Y G I+P + VP + + E + + +++ Sbjct: 225 GKLGHAALRHLLDYG---FQGPIYPVNPGSRHV---RGVPAYAGIEEVPD--DVDLAIVA 276 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPG 131 VP + + ++ +V IT G + A S R++GPNC G Sbjct: 277 VPAEEVAAVVEAARRKKVRGLVVITGGFGESGAEGRARERALVAAARASGMRVVGPNCLG 336 Query: 132 ILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 I+ D + + +G VG ++SG L + Q LG ST V G Sbjct: 337 IVNTDPAVRLNASLAPRVPGRGRVGFFAQSGALGSALLEQARTRNLGLSTFVSAGNRA-- 394 Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP 249 D+L+ + D TE +++ E G+ +F + + GR KP+V +G+ Sbjct: 395 DVSGNDLLQYWATDPGTEVVLLHLESFGNP----RKFARLARQVGRTKPVVAVKSGRHVR 450 Query: 250 PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 T G AG ++ + AG+ + A++ Sbjct: 451 M--TEGLAGTSVAVPEESVAAL---FASAGVIRVETLAQL 485 >gi|253990662|ref|YP_003042018.1| hypothetical protein PAU_03188 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782112|emb|CAQ85276.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 880 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 98/278 (35%), Gaps = 23/278 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +A + + + I P K V + ++ + + +VI Sbjct: 26 RASSVMMRNLLAGGFAGPILPITPNK------SSVQGVLAYPSIDKLP--ITPDLAVICT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 S + + + ++ ++ P +K ++ S RL+GPN G+L P Sbjct: 78 HHSRNLQCLEQLGKRGCKTVIILSS--PRPQFAELKQCCQRYSIRLLGPNSLGLLAPWQG 135 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 KG + +S+S ++ + G+G S + +G + +L+ Sbjct: 136 LNASFSPVPILKGKLAFISQSAAVSNTILDWAQHRGVGFSYFIALGDSVDIDIDH--LLD 193 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E +A +FL R KPI+ +G+T + +G Sbjct: 194 FLARDSKTSAILLYLEHI----HDARRFLSASRSASRNKPILVVKSGRTKQAQKLLGEQQ 249 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + A++ AG+ + ++ L Sbjct: 250 NLDA-------AYDAAIQRAGLLRVQDTHEMFSAVETL 280 >gi|126665000|ref|ZP_01735983.1| predicted Acetyl-CoA synthetase [Marinobacter sp. ELB17] gi|126630370|gb|EBA00985.1| predicted Acetyl-CoA synthetase [Marinobacter sp. ELB17] Length = 714 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 96/262 (36%), Gaps = 24/262 (9%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P G P ++ A ++I P D + + Sbjct: 39 YEGAIYPINPKADTILGYKAYPSMESLPG-----PAALALICTPAKTIPDLLGQCGRNGT 93 Query: 96 PLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 + + G +D K +K++ R++GPN G+ K+ ++ + Sbjct: 94 KGAIILASGFGEVDEAGAKLGQEVLEAAQKANVRIVGPNTSGVFNLHK-KVNLLALDNVK 152 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEG-LGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 G +GI+S+SG + + G +G ST VG G F D L+ DE T Sbjct: 153 PGDIGIISQSGNMLLALALEAESNGHVGFSTYVGPGNQ--IDLGFADYLQYLGEDENTRV 210 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGG 267 + E ++ FL + + KP+V + +G T + H GA+ G Sbjct: 211 ATLYVEGF----KDGRVFLNVAKEIAKTKPVVVYKSGSTEAGQKAAKSHTGALA----GS 262 Query: 268 AEDKINAMKEAGICIAPSPARI 289 ++ +++ G+ + I Sbjct: 263 YAMTVDLLRQVGVTVVSQSDEI 284 >gi|218533112|ref|YP_002423928.1| GCN5-related N-acetyltransferase [Methylobacterium chloromethanicum CM4] gi|218525415|gb|ACK86000.1| GCN5-related N-acetyltransferase [Methylobacterium chloromethanicum CM4] Length = 900 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 87/230 (37%), Gaps = 14/230 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS---RLIGP 127 + +I PP+ + E+ + V ++ + V + A + RLIGP Sbjct: 70 PDLVMIATPPAAVPGIVEEAGQIGAAAAVILSAHLGVGEAAPAGAAHAAARRHGLRLIGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + G+ P + + G + ++S+SGT+ + G+G S + +G Sbjct: 130 DSVGLSVPARGLNASLLARPPKPGDLALISQSGTVASAIAEWGWRHGVGFSAVMTLGRSA 189 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + D L+ F D T +I++ +A +FL R KP+V G+ Sbjct: 190 --DIDIADCLDHFAEDFHTRAIILSLHHIT----DARKFLTAARAAARAKPVVVLRTGRH 243 Query: 248 -APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 AP R H GA+ G A + AG+ + ++ L Sbjct: 244 DAPGRRPETHTGALARPGA----VYEAAFRRAGLLAVDGLDAMFSAVETL 289 >gi|163854167|ref|YP_001642210.1| GCN5-related N-acetyltransferase [Methylobacterium extorquens PA1] gi|163665772|gb|ABY33139.1| GCN5-related N-acetyltransferase [Methylobacterium extorquens PA1] Length = 900 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 87/230 (37%), Gaps = 14/230 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS---RLIGP 127 + +I PP+ + E+ + V ++ + V + A + RLIGP Sbjct: 70 PDLVMIATPPAAVPGIVEEAGQIGAAAAVILSAHLGVGEAAPAGAAHAAARRHGLRLIGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + G+ P + + G + ++S+SGT+ + G+G S + +G Sbjct: 130 DSVGLSVPARGLNASLLARPPKPGDLALISQSGTVASAIAEWGWRHGVGFSAVMTLGRSA 189 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + D L+ F D T +I++ +A +FL R KP+V G+ Sbjct: 190 --DIDIADCLDHFAEDFHTRAIILSLHHIT----DARKFLTAARAAARAKPVVVLRTGRH 243 Query: 248 -APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 AP R H GA+ G A + AG+ + ++ L Sbjct: 244 DAPGRRPETHTGALARPGA----VYEAAFRRAGLLAVDGLDAMFSAVETL 289 >gi|308187859|ref|YP_003931990.1| hypothetical protein Pvag_2368 [Pantoea vagans C9-1] gi|308058369|gb|ADO10541.1| Uncharacterized protein yfiQ [Pantoea vagans C9-1] Length = 885 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 99/279 (35%), Gaps = 23/279 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AG F + + V + PK G + P ++ A + +VI Sbjct: 25 GRAGYFMMRNLLAGGFSGPVLPVTPK---YKAVSGVLAWPTIDSLP-----FAPDLAVIC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + + E + ++ P +KA + RL+GPN G+L P Sbjct: 77 THSKRNLELLQQLGEKGCKACIILSA--PASQSAELKACASQWQIRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 KG + +S+S ++ + Q LG S + +G + + L Sbjct: 135 GLNASFSPVPIEKGRIAFISQSAAVSNTILDWAQQRNLGFSWFIALGDSLDTDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G+ A Sbjct: 193 DFLARDGKTSAILLYLEHLS----DARRFVSASRSASRNKPILVIKSGR-------SREA 241 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A++ G A++ AG+ + ++ L Sbjct: 242 QALLGTHSGLDAAWDAAIQRAGLLRVQDTHELFSAVESL 280 >gi|55377722|ref|YP_135572.1| succinyl-CoA synthetase [Haloarcula marismortui ATCC 43049] gi|55230447|gb|AAV45866.1| succinyl-Coa synthetase [Haloarcula marismortui ATCC 43049] Length = 701 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 61/289 (21%), Positives = 112/289 (38%), Gaps = 25/289 (8%) Query: 10 KVLVQGLTGKAGTF-HT-EQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 +V V G T G+ H +L T V ++P K G +P + +A + Sbjct: 12 RVAVVGATDSEGSVGHAVTTNLLDSFTGEVVAVNPNK--ETVLG----LPCYDNLARLDD 65 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSS 121 + + +V+ VPP+ A + I + EA I +V IT G R++ + Sbjct: 66 PGSVDVAVVVVPPTVAVEVIENAGEAGIENVVVITAGFGETGSDGAEREKRLREAASEYD 125 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 L+GPN G+++ + G + +S+SG + ++ +G V Sbjct: 126 LNLVGPNSLGVMSTPVGLNATFGNEMASDGDISFMSQSGAFITAVLDWAAERDVGFKDIV 185 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G V D + + D T+ I+ E + + F++ + ++ PIV Sbjct: 186 SLGNKAVLDES--DFVAEWGDDPDTDVILGYLEDIN----DGSSFVQTAREVTQETPIVL 239 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 +G+T A A +G G+E A + +AG S + Sbjct: 240 VKSGRTDAGA----SAAASHTGAMAGSERAYEAGLDKAGTLRVESVQEL 284 >gi|254564134|ref|YP_003071229.1| hypothetical protein METDI5826 [Methylobacterium extorquens DM4] gi|254271412|emb|CAX27425.1| conserved hypothetical protein; putative acyl-CoA synthetase and acetyltransferase domains [Methylobacterium extorquens DM4] Length = 900 Score = 96.6 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 87/230 (37%), Gaps = 14/230 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS---RLIGP 127 + +I PP+ + E+ + V ++ + V + A + RLIGP Sbjct: 70 PDLVMIATPPAAVPGIVEEAGQIGAAAAVILSAHLGVGEAAPAGAAHAAARRHGLRLIGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + G+ P + + G + ++S+SGT+ + G+G S + +G Sbjct: 130 DSVGLSVPARGLNASLLARPPKPGDLALISQSGTVASAIAEWGWRHGVGFSAVMTLGRSA 189 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + D L+ F D T +I++ +A +FL R KP+V G+ Sbjct: 190 --DIDIADCLDHFAEDFHTRAIILSLHHIT----DARKFLTAARAAARAKPVVVLRTGRH 243 Query: 248 -APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 AP R H GA+ G A + AG+ + ++ L Sbjct: 244 DAPGRRPETHTGALARPGA----VYEAAFRRAGLLAVDGLDAMFSAVETL 289 >gi|240141627|ref|YP_002966107.1| hypothetical protein MexAM1_META1p5228 [Methylobacterium extorquens AM1] gi|240011604|gb|ACS42830.1| conserved hypothetical protein with putative acyl-CoA synthetase and acetyltransferase domains [Methylobacterium extorquens AM1] Length = 900 Score = 96.6 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 87/230 (37%), Gaps = 14/230 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS---RLIGP 127 + +I PP+ + E+ + V ++ + V + A + RLIGP Sbjct: 70 PDLVMIATPPAAVPGIVEEAGQIGAAAAVILSAHLGVGEAAPAGAAHAAARRHGLRLIGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + G+ P + + G + ++S+SGT+ + G+G S + +G Sbjct: 130 DSVGLSVPARGLNASLLARPPKPGDLALISQSGTVASAIAEWGWRHGVGFSAVMTLGRSA 189 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + D L+ F D T +I++ +A +FL R KP+V G+ Sbjct: 190 --DIDIADCLDHFAEDFHTRAIILSLHHIT----DARKFLTAARAAARAKPVVVLRTGRH 243 Query: 248 -APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 AP R H GA+ G A + AG+ + ++ L Sbjct: 244 DAPGRRPETHTGALARPGA----VYEAAFRRAGLLAVDGLDAMFSAVETL 289 >gi|166710314|ref|ZP_02241521.1| hypothetical protein Xoryp_02235 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 902 Score = 96.6 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 49/234 (20%), Positives = 89/234 (38%), Gaps = 15/234 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 + VI P + + + + +T G+ P R++A R++GP Sbjct: 70 PDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGSGPDSPAARMEAAARAKGLRILGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 +C G++ P + + + G + ++S S + V +G S V +G Sbjct: 130 HCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLG--D 187 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 +F D+L+ F D T +I++ E G +A +F+ R KP+V +G+ Sbjct: 188 TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVVKSGRQ 243 Query: 248 APPG-RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 HA A+ G A AG+ + + + E LG L Sbjct: 244 YRINPNADTHAQALA----GSDAVYGAAFARAGLLRVGALDELFAA-AETLGRL 292 >gi|212710074|ref|ZP_03318202.1| hypothetical protein PROVALCAL_01127 [Providencia alcalifaciens DSM 30120] gi|212687281|gb|EEB46809.1| hypothetical protein PROVALCAL_01127 [Providencia alcalifaciens DSM 30120] Length = 516 Score = 96.6 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 112/258 (43%), Gaps = 23/258 (8%) Query: 51 GGNVNVPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 GG + + T+ AK AN ++I V A ++E ++ ++ ++ + + D Sbjct: 94 GGGQHEAKYATINSAKTHIPEANLAIISVNGQFAAREARIALENDLN-VMLFSDNVSIED 152 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 + +K ++GP+C + + + G+ R+GS+GI+ SGT + E + Sbjct: 153 ELALKQLASHKGLLMMGPDCGTAIINGT---ALCFGNNVRRGSIGIIGASGTGSQELSVR 209 Query: 170 TSQEGLGQSTAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + G G S +G GG + G ID L++ AD+ T+ IV++ + A+ Sbjct: 210 IHEFGAGVSQLIGTGGRDLSEKIGGIMMIDALKMLDADDETQVIVLISKPPAPM---VAK 266 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP- 284 + ++A++ K +V F+ + P + ++ +G E + A+ GI Sbjct: 267 KVLEQAEKCHKPVVVCFLGSQPLPDDKPG------LTFAQGTKEAALKAVLLTGIRKEDL 320 Query: 285 --SPARIG--RSLVELLG 298 P + + ELL Sbjct: 321 DLHPLNLPLIDEVRELLK 338 >gi|48477608|ref|YP_023314.1| acyl-CoA synthetase [Picrophilus torridus DSM 9790] gi|48430256|gb|AAT43121.1| acyl-CoA synthetase [Picrophilus torridus DSM 9790] Length = 657 Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 90/239 (37%), Gaps = 20/239 (8%) Query: 59 FTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------V 111 + + K+ + +++ VP D I ++I++ + IT G D Sbjct: 52 YKSYKSLKDINENVDLAIVAVPRDSVPDVIQDAIDSGTGAAIIITSGFKETDQHGAELEE 111 Query: 112 RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 R+K+ KS R +GPN GI+TP G S KG ++++SG L + Sbjct: 112 RIKSMASKSGLRFLGPNTIGIITP--SFNGTFAFSDNIKGGAALVAQSGGLGVYMLNWAQ 169 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + G S V +G + D+ E D T++I E + FL Sbjct: 170 KTRTGISYFVSLGNQ--TDIKESDIFEFLANDVETKAIFSYLEGVS----DGDAFLNTVP 223 Query: 232 KRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + +KKP++ G + H G+V G + A++ G S + Sbjct: 224 EVTKKKPLIFLKGGTGKSGTAAIKTHTGSVA----GSVDIFKAAVRACGGIFVESLEDM 278 >gi|117927728|ref|YP_872279.1| CoA-binding domain-containing protein [Acidothermus cellulolyticus 11B] gi|117648191|gb|ABK52293.1| CoA-binding domain protein [Acidothermus cellulolyticus 11B] Length = 911 Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 93/248 (37%), Gaps = 19/248 (7%) Query: 50 TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV-- 107 VP + ++A+ + ++ VP + ++ + +V I+ G Sbjct: 249 GHRVAGVPAYASLADLPASP--DVVIVAVPAAEVLAVARQAAQRHPAGLVVISAGFAEAG 306 Query: 108 ----LDMVRVKARLEKSSSRLIGPNCPGI--LTPDSCKIGIMPGSIFRKGSVGILSRSGT 161 + A + RLIGPNC GI + P+ ++ G + ++S+SG Sbjct: 307 AEGAERQRELLAICRAAGMRLIGPNCMGIANIDPEISLNATFCATMPPPGGISLMSQSGA 366 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 + A+ ++ G+G +T + G DVL + +D T + E G+ Sbjct: 367 VGIAALNHAARSGVGLATFISAGNKA--DVSGNDVLCAWESDPRTRVCALYLESFGNP-- 422 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +F + + G+ KPIV AG+T R A + + +AG+ Sbjct: 423 --RKFARIARRVGKAKPIVAVKAGRTLAGIRGAASHTAAAATPDVVVDSL---FAQAGVT 477 Query: 282 IAPSPARI 289 S + Sbjct: 478 RVDSLEDL 485 >gi|294631872|ref|ZP_06710432.1| acetyltransferase, GNAT family protein [Streptomyces sp. e14] gi|292835205|gb|EFF93554.1| acetyltransferase, GNAT family protein [Streptomyces sp. e14] Length = 559 Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 87/256 (33%), Gaps = 29/256 (11%) Query: 51 GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV--- 107 VP +V E + +V+ VP + E E + +V I+ G Sbjct: 276 TEIAGVPAHRSVREI--DGPVDLAVVAVPAEHVPGVVTECGEHGVQGLVVISAGYAESGP 333 Query: 108 ---LDMVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTL 162 + R+IGPN GI+ P + + R G +G+ ++SG + Sbjct: 334 EGRERQRALVRHARAYGMRIIGPNAFGIVNTSPGVRLNASLAPEMPRPGRIGMFAQSGAI 393 Query: 163 TYEAVFQTSQE------GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIG 216 + + + G ST V G DVL+ + D T+ +M E Sbjct: 394 GIALLSRLHRRGGGVTGTTGVSTFVSSGNRA--DVSGNDVLQYWYDDPDTDVALMYLESI 451 Query: 217 GSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMK 276 G+ +F + + KP+V +AP G + + ++ Sbjct: 452 GNP----RKFTRLARRTAAAKPLVVVQGAGSAPQGHAVRATRLPHATVSAL-------LR 500 Query: 277 EAGICIAPSPARIGRS 292 +AG+ + + + Sbjct: 501 QAGVIRVDTITELVDT 516 >gi|256829259|ref|YP_003157987.1| GCN5-like N-acetyltransferase [Desulfomicrobium baculatum DSM 4028] gi|256578435|gb|ACU89571.1| GCN5-related N-acetyltransferase [Desulfomicrobium baculatum DSM 4028] Length = 896 Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 109/308 (35%), Gaps = 28/308 (9%) Query: 1 MSI-----LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVN 55 MS+ L N+ ++ G + + + +G + P G+ G Sbjct: 1 MSVKHLDLLFKPNSLAII-GASRDPNSVSAILMRNLMSGKFLGPVLPVSGAQEAIFG--- 56 Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV-- 113 V + V A + ++I P D ++E ++ + V + G +L+ Sbjct: 57 --VLSYVDVASLPLTPDMAIICSPAHEIPDRLVELVDNGTHVAVIMDPGYALLEAKERAL 114 Query: 114 -----KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + L + R++GP G++ P S + ++G + +++S +L + Sbjct: 115 MDEKIRKVLREKDIRVLGPGSLGMIVPASGVNASLSRVGAKEGRIAFVTQSDSLFESVLD 174 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 +G S + +G +F VL+ +D AT++I++ E ++A +F+ Sbjct: 175 WARTNNVGFSHCISLGRQ--LDVDFSCVLDYLGSDPATKAILLYVENI----QDARRFMS 228 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 R KPI+ + P A + A + AG+ Sbjct: 229 ATRASARNKPILVIRP-RRLPCDLRD---AASELTEMDQDQIYDAAFRRAGMVRVDDIDS 284 Query: 289 IGRSLVEL 296 + L Sbjct: 285 LFEGARTL 292 >gi|33603770|ref|NP_891330.1| putative acetyl-CoA synthetase [Bordetella bronchiseptica RB50] gi|33577895|emb|CAE35160.1| putative acetyl-CoA synthetase [Bordetella bronchiseptica RB50] Length = 713 Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 101/277 (36%), Gaps = 31/277 (11%) Query: 24 HTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGA 83 H Y T + ++P++ +P ++A + +++ +P Sbjct: 45 HYVTRNGYRGTVI--PVNPRRA------EVAGLPAVPSIAHL---GPVDVAILALPVDMI 93 Query: 84 GDAIIESIEAEIPLIVCITEGIPVL------DMVRVKARLEKSSSRLIGPNCPGILTPDS 137 AI E A + V ++ G L R+ ++ RL+GPNC GI+ P Sbjct: 94 EQAIGECAAAGVGACVIVSAGFAELGDEGVARQDRIVRIAREAGMRLVGPNCMGIINPHH 153 Query: 138 CKIGI----MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 + G++G++S+SG L + +E + S V +G E Sbjct: 154 RMALTSSLVVEQGELLPGNIGLISQSGALMVSMYDRACREQIRFSACVSLGNQ--CDLEI 211 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 D E + D T I M E A+ + + G KP++ G+TA Sbjct: 212 CDFFEYMIDDPLTRVITMYVEGF-VDTGRFAELARRAQRAG--KPVLLTKTGRTAAGAEA 268 Query: 254 MGHAGAVISGGKGGAEDKINAMKEA-GICIAPSPARI 289 A ++G + A+ EA G+ I P + Sbjct: 269 ARSHTASLAGN----YRALEALCEATGVTIVDDPDGM 301 >gi|227113629|ref|ZP_03827285.1| putative acyl-CoA synthetase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 803 Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 100/279 (35%), Gaps = 22/279 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AG + + + V + PK V + TVA + +VI Sbjct: 25 GRAGFLMMKNLLDGHFSGPVLPVTPK------YRAVCGVLAYPTVASLP--MTPDLAVIC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E + ++ ++ P +KA + RL+GPN G+L P Sbjct: 77 TNASRNLTLLEELGQKGCKTVIILSA--PPTQFSELKACAVRYHMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 KG + +S+S ++ + Q G+G S + +G + + L Sbjct: 135 GLNASFSPVPIMKGKLAFISQSAAVSNTILDWAQQRGIGFSYFIALGDSLDIDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +FL R KPI+ +G++ + Sbjct: 193 DFLARDGKTSAILLHLEHIS----DARRFLSASRSASRNKPILVIKSGRS----QQAQQL 244 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G A D A++ AG+ + ++ L Sbjct: 245 LNDQRHGLDAAYD--AAIQRAGLLRVRDTHELFSAVETL 281 >gi|304398702|ref|ZP_07380574.1| GCN5-related N-acetyltransferase [Pantoea sp. aB] gi|304353913|gb|EFM18288.1| GCN5-related N-acetyltransferase [Pantoea sp. aB] Length = 891 Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 99/279 (35%), Gaps = 23/279 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AG F + + V + PK G + P ++ A + +VI Sbjct: 25 GRAGYFMMRNLLAGGFSGPVLPVTPK---YKAVSGVLAWPTIDSLP-----FAPDLAVIC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + + E + ++ P +KA K RL+GPN G+L P Sbjct: 77 THSKRNLELLQQLGEKGCKACIILSA--PASQSAELKACAGKWQIRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 KG + +S+S ++ + Q LG S + +G + + L Sbjct: 135 GLNASFSPVPIEKGRIAFISQSAAVSNTILDWAQQRNLGFSWFIALGDSLDTDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G+ A Sbjct: 193 DFLARDGKTSAILLYLEHLS----DARRFVSASRSASRNKPILIIKSGR-------SREA 241 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A++ G A++ AG+ + ++ L Sbjct: 242 QALLGTHSGLDAAWDAAIQRAGLLRVQDTHELFSAVESL 280 >gi|253689699|ref|YP_003018889.1| GCN5-related N-acetyltransferase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756277|gb|ACT14353.1| GCN5-related N-acetyltransferase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 882 Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 100/279 (35%), Gaps = 22/279 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AG + + + V + PK V + TVA + +VI Sbjct: 25 GRAGFLMMKNLLDGHFSGPVLPVTPK------YRAVCGVLAYPTVASLP--MTPDLAVIC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E + ++ ++ P +KA + RL+GPN G+L P Sbjct: 77 TNASRNLTLLEELGQKGCKTVIILSA--PPTQFSELKACAVRYHMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 KG + +S+S ++ + Q G+G S + +G + + L Sbjct: 135 GLNASFSPVPIMKGKLAFISQSAAVSNTILDWAQQRGIGFSYFIALGDSLDIDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +FL R KPI+ +G++ + Sbjct: 193 DFLARDGKTSAILLHLEHIS----DARRFLSASRSASRNKPILVIKSGRS----QQAQQL 244 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G A D A++ AG+ + ++ L Sbjct: 245 LNDQRHGLDAAYD--AAIQRAGLLRVRDTHELFSAVETL 281 >gi|86147979|ref|ZP_01066282.1| hypothetical protein MED222_06745 [Vibrio sp. MED222] gi|85834203|gb|EAQ52358.1| hypothetical protein MED222_06745 [Vibrio sp. MED222] Length = 893 Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 95/254 (37%), Gaps = 24/254 (9%) Query: 57 PVFTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 P + +VA + +++ + E E I ++ ++ + Sbjct: 47 PKYDSVAGVLSYKNILSLPIVPDLAILCTNATRNVAIFEELAEKGIASVIVLSSDMQQQS 106 Query: 110 M------VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLT 163 R A + ++ R++G N G++ P G + +S+S + Sbjct: 107 NSGGTFDERCIAIAKANNIRVLGSNSLGVIVPWLNLNASFSPVTALPGKIAFVSQSAAVC 166 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 + + + +G S + IG EF ++L+ D TE+I++ + + ++A Sbjct: 167 TTILDWANDKEIGFSAFISIGNG--SDIEFSELLDYLSTDSHTEAILLYVD----SIKDA 220 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE-DKINAMKEAGICI 282 +F+ R + I+ G+TA A + +GG + +A++ +G+ Sbjct: 221 RRFISAARAASRNRRILVLKGGRTAKG----RAAAMLHTGGADTLDIIYDSAIRRSGMLR 276 Query: 283 APSPARIGRSLVEL 296 + + ++ L Sbjct: 277 VKNLHELFAAVETL 290 >gi|323097749|emb|CBJ18436.1| ATP citrate lyase [uncultured bacterium] Length = 335 Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 6/124 (4%) Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + IGGD G+ FID L + + ++++GE+GG+ E + + +K KPI Sbjct: 1 CIAIGGDRFVGSVFIDNLLRMEKNPDVKYMILLGEVGGTEEYKVIEAVK---SGKITKPI 57 Query: 240 VGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + G A G GHAGA +G AE K AM EAGI + + + + E+ Sbjct: 58 IAWCIGTIAKYYDSGVQFGHAGASANGEMETAEYKNKAMAEAGIHVPKTFNDLPAKIKEV 117 Query: 297 LGSL 300 SL Sbjct: 118 FTSL 121 >gi|218676512|ref|YP_002395331.1| Acyl-CoA synthetase [Vibrio splendidus LGP32] gi|218324780|emb|CAV26462.1| Acyl-CoA synthetase [Vibrio splendidus LGP32] Length = 893 Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 96/254 (37%), Gaps = 24/254 (9%) Query: 57 PVFTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP--- 106 P + +VA A+ +++ + E E I ++ ++ + Sbjct: 47 PKYDSVAGVLSYKNILSLPIVADLAILCTNATRNVAIFEELAEKGIASVIVLSSDMQQQS 106 Query: 107 ---VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLT 163 R A + ++ R++G N G++ P G + +S+S + Sbjct: 107 DSGETFDERCIAIAKANNIRVLGSNSLGVIVPWLNLNASFSPVTALPGKIAFVSQSAAVC 166 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 + + + +G S + IG EF ++L+ D TE+I++ + + ++A Sbjct: 167 TTILDWANDKEIGFSAFISIGNG--SDIEFSELLDYLSTDSHTEAILLYVD----SIKDA 220 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE-DKINAMKEAGICI 282 +F+ R + I+ G+TA A + +GG + +A++ +G+ Sbjct: 221 RRFISAARAASRNRRILVLKGGRTAKG----RAAAMLHTGGADTLDIIYDSAIRRSGMLR 276 Query: 283 APSPARIGRSLVEL 296 + + ++ L Sbjct: 277 VKNLHELFAAVETL 290 >gi|72161706|ref|YP_289363.1| 6-carboxyhexanoate--COA ligase [Thermobifida fusca YX] gi|71915438|gb|AAZ55340.1| probable 6-carboxyhexanoate--COA ligase [Thermobifida fusca YX] Length = 692 Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 115/297 (38%), Gaps = 27/297 (9%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILY-CQTQVVGGIHPKKGSTYWTGGNVNVPVFTTV 62 L++ ++ ++ G + H + + +T G I+P G + + + Sbjct: 8 LINPDSVAII-GASPNEAG-HAGRCLANLERTGYPGRIYPVNPKYDRIGAHT---CYPSA 62 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL------DMVRVKAR 116 + E+ +A+ + VP A+ + +E I + + G L R+ R Sbjct: 63 RDLPEQ--VDAAYLLVPARAVESALEDCLERGIRTVTICSAGYAELGAEGAERQRRLVER 120 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIG---IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + R++GPNC G+L P +G + GS+ +LS+SG + + Sbjct: 121 ARERGVRILGPNCIGVLNPVDTYVGCPTFNITYSYTPGSIALLSQSGGMAAALFNRAQGR 180 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G T V +G + + ++L+ F+AD T I + E + E R Sbjct: 181 TIGIRTMVSLGNEA--DIQMGELLDAFVADPQTRVIAIYIE---QLRDAERFAAAAERAR 235 Query: 234 GRKKPIVGFVAGKTAPPGRT-MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KPIV G + RT +GH GA+ G + M+ G+ S + Sbjct: 236 AAGKPIVLLKVGGSEAGRRTVLGHTGAMA----GEQAVFSSMMRHLGVVEVHSIDDL 288 >gi|84392311|ref|ZP_00991738.1| hypothetical protein V12B01_14145 [Vibrio splendidus 12B01] gi|84376431|gb|EAP93311.1| hypothetical protein V12B01_14145 [Vibrio splendidus 12B01] Length = 893 Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 92/254 (36%), Gaps = 24/254 (9%) Query: 57 PVFTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 P + +VA + +++ + E E I ++ ++ + Sbjct: 47 PKYDSVAGVLSYKNILSLPIVPDLAILCTNATRNVAIFEELAEKGIASVIVLSSDMQQQS 106 Query: 110 M------VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLT 163 R A +K + R++G N GI+ P G + +S+S + Sbjct: 107 DNGETYDARCLAIAKKHNIRVLGSNSLGIIVPWLNLNASFSPVTALPGKIAFVSQSAAVC 166 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 + + + +G S + IG EF ++L+ D TE+I++ + +A Sbjct: 167 TTILDWANDKEIGFSAFISIGNG--SDIEFSELLDYLSTDSHTEAILLYVDSIT----DA 220 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE-DKINAMKEAGICI 282 +F+ R + I+ G+TA A +GG + +A++ +G+ Sbjct: 221 RRFISAARAASRNRRILVLKGGRTAKG----RAAAMAHTGGADTLDIIYDSAIRRSGMLR 276 Query: 283 APSPARIGRSLVEL 296 + + ++ L Sbjct: 277 VKNLHELFAAVETL 290 >gi|283786199|ref|YP_003366064.1| acyl-CoA synthetase [Citrobacter rodentium ICC168] gi|282949653|emb|CBG89272.1| putative acyl-CoA synthetase [Citrobacter rodentium ICC168] Length = 886 Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 101/280 (36%), Gaps = 27/280 (9%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P VA + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWP---DVASLP--FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD 136 S A++E++ E + ++ + + + RL+GPN G+L P Sbjct: 77 TNASR-HLALLEALGEKGCKTCIILSAPASLHHELMT--CAARYKMRLLGPNSLGLLAPW 133 Query: 137 SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 ++G + +S+S ++ + Q +G S + +G + ++ Sbjct: 134 QGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--EL 191 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGH 256 L+ D T +I++ E +A +F+ R KPI+ +G++ P + + H Sbjct: 192 LDYLARDSKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLH 246 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + A++ AG+ + ++ L Sbjct: 247 TSSGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|218698776|ref|YP_002406405.1| putative enzyme with acyl-CoA domain [Escherichia coli IAI39] gi|218368762|emb|CAR16506.1| putative enzyme with acyl-CoA domain [Escherichia coli IAI39] Length = 515 Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIASAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFCGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE IV++ + A A + L+ R Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAV--ARKVLE--RAR 272 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 +KP+V G+ P G + +G E + A+ +G+ Sbjct: 273 ACRKPVVVCFLGRGETPVDEQG-----LQFARGSKEAALKAVMLSGVK 315 >gi|262089323|gb|ACY24543.1| CoA-binding domain-containing protein [uncultured crenarchaeote 76h13] Length = 706 Score = 95.9 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 63/309 (20%), Positives = 114/309 (36%), Gaps = 30/309 (9%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M + + + L+ G + + G + G ++P Y + V + Sbjct: 249 MDLFFNAKSVALI-GASPEEGKIGNSVMESLVKHDYKGKVYPVNAKGY--PEIMGVKAYK 305 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL---DMVRVKA-- 115 + + +E + ++ V D ++E + I +V I+ G L K Sbjct: 306 NLMDIEE--PVDVVIVTVDLKFVPDLLVECGKKNIHNMVVISGGGKELGGERAAIEKRVQ 363 Query: 116 -RLEKSSSRLIGPNCPGILT----PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 R+IGPNC GI D G + ++G+V LS+SGT+ F Sbjct: 364 DLSRDLKVRIIGPNCIGIFNGENRLDCAFQGHLRMLRPKQGNVSFLSQSGTVG--IAFME 421 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL--K 228 + + G S + G + D++ D +T I + E G + +F+ Sbjct: 422 TSDAFGLSKMISYGNR--SDVDEADMIHYLAQDPSTNVIGLYVEGLG----DGRKFMNSA 475 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPA 287 + +KPIV F G++ + A +G GG+ I A ++ GI S Sbjct: 476 KNVIKQYQKPIVVFKNGRSTRGAKQ----AASHTGSLGGSFAVIIGAFEQTGIISVDSYE 531 Query: 288 RIGRSLVEL 296 + +L L Sbjct: 532 ELTSALKAL 540 >gi|161527714|ref|YP_001581540.1| CoA-binding domain-containing protein [Nitrosopumilus maritimus SCM1] gi|160339015|gb|ABX12102.1| CoA-binding domain protein [Nitrosopumilus maritimus SCM1] Length = 698 Score = 95.9 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 104/240 (43%), Gaps = 19/240 (7%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR-- 116 + +V + + + + +VI + + + E + +I ++ IT G +D K Sbjct: 56 YKSVLDVPK--SIDLAVIVIKNTLVTPVLEECGKKKIKGVIIITAGFKEVDEEGAKREQQ 113 Query: 117 ----LEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 +K + +++GPNC G++ DS + G + ++S+SG + V Sbjct: 114 VIDIAKKYNMQVVGPNCLGVMNLDSKTMMNSTFLKVTPKSGKIALVSQSGAICAALVEDA 173 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 S +G+G S V +G V +DVL++ + TE IVM E G +E + Sbjct: 174 SAQGIGFSAVVSLGNKAV--MSEVDVLKILANHKQTEVIVMYLEDMGDGQEFL--KVCKN 229 Query: 231 AKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + KKP++ +G++ + M H GA++ G E +K++G + + Sbjct: 230 ITKKLKKPVLVLKSGRSPEGAKAAMSHTGALM----GSDEIYDALLKQSGAIRVDTMEEL 285 >gi|261344578|ref|ZP_05972222.1| putative oxidoreductase subunit [Providencia rustigianii DSM 4541] gi|282567492|gb|EFB73027.1| putative oxidoreductase subunit [Providencia rustigianii DSM 4541] Length = 516 Score = 95.9 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 94/210 (44%), Gaps = 18/210 (8%) Query: 45 GSTYWTGGNVNVPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE 103 G + + T+ AK +N ++I V A ++E ++ ++ ++ Sbjct: 94 GGSTHEAK------YATLNSAKSHIPESNLAIISVNGQFAAREARIALENDLN-VMLFSD 146 Query: 104 GIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLT 163 + + D + +K + ++GP+C + + + G+ R+G++GI+ SGT + Sbjct: 147 NVSIEDELALKQLASRKGLLMMGPDCGTAIINGT---ALCFGNDVRRGNIGIIGASGTGS 203 Query: 164 YEAVFQTSQEGLGQSTAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSA 219 E + + G G S +G GG + G ID L++ AD+ T I ++ + + Sbjct: 204 QELSVRIHEFGAGVSQLIGTGGRDLSEKIGGIMMIDALKMLDADDETHVIALISKPPAPS 263 Query: 220 EEEAAQFLKDEAKRGRKKPIVGFVAGKTAP 249 A+ + ++AK+ K +V F+ + P Sbjct: 264 ---VAKKVLEQAKKCHKPVVVCFLGSQPLP 290 >gi|72162527|ref|YP_290184.1| hypothetical protein Tfu_2128 [Thermobifida fusca YX] gi|71916259|gb|AAZ56161.1| conserved hypothetical protein [Thermobifida fusca YX] Length = 907 Score = 95.9 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 97/262 (37%), Gaps = 26/262 (9%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 V +HP V + +V + + + +++ V D + + + Sbjct: 228 PVFPVHP------EATAVAGVKAYPSVLDIPD--PVDLAIVAVRADMVADVVDQCARKGV 279 Query: 96 PLIVCITEGIPVLDMVRVKA------RLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSI 147 +V ++ G K + R++GPNC G+ P + ++ Sbjct: 280 HGLVVVSSGFGETGPEGKKRQDELVRAARAAGMRVVGPNCLGVANTDPKVSLNATLSPNL 339 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 +G +G S+SG L + + +Q GLG ST V G D+L+ + D ATE Sbjct: 340 PPRGRIGFFSQSGALGRAILERVAQRGLGLSTFVSAGNRA--DVSGNDLLQYWEEDPATE 397 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 ++ E G+ +F + + R+KP+V +G + AG + Sbjct: 398 VVLQYLESLGNP----RKFTRLARRLARRKPVVVVRSGGSVRGVPRGHAAGTLSLPD--- 450 Query: 268 AEDKINAMKEAGICIAPSPARI 289 + +++G+ ++ Sbjct: 451 -YAVTSLFEQSGVVRVEDITQM 471 >gi|85858899|ref|YP_461101.1| acetyl-CoA synthetase subunit beta [Syntrophus aciditrophicus SB] gi|85721990|gb|ABC76933.1| acetyl-CoA synthetase beta subunit [Syntrophus aciditrophicus SB] Length = 697 Score = 95.9 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 108/288 (37%), Gaps = 32/288 (11%) Query: 17 TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVI 76 TG E + Y + I+PK + F ++ E E N +I Sbjct: 19 TGPDTYNGVEMMLRYGYQGRIYPINPK------ADEICGLRAFPSITEVPE--TVNLVII 70 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCP 130 + A E I++ + ++ +++G D + +S R++GPN Sbjct: 71 SMGRDQVVAAFKECIQSGVKRVMIVSQGFADADPHGEKLQNEIVRLARESGIRVVGPNTL 130 Query: 131 GILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 GIL + + ++ V +++++G + A + G++ +G Sbjct: 131 GILNNFRNFSTSFVDLIKPKKIPP--VSLIAQTG-MIQVASHNLAYHDWGKALDIGNAC- 186 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 +F+D LE F AD T IV+ E +FLK ++ KPI+ F G+ Sbjct: 187 ---DVDFVDALEYFGADPETRVIVVHME----GIIRGREFLKAASRISPDKPIIIFKTGR 239 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 T + A ++G AE A AG+ + + + ++ Sbjct: 240 TTAGAKAALSHTASLTGEDEIAE---AAFNRAGLIRVKNGSELKDAIR 284 >gi|294664797|ref|ZP_06730121.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605428|gb|EFF48755.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 902 Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 15/234 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 + VI P + + + + +T G+ P R++A R++GP Sbjct: 70 PDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGSGPGSPAARMEAAARAKGMRILGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 +C G++ + + + G + ++S S + V +G S V +G Sbjct: 130 HCLGVIASHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFSAVVSLG--D 187 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 +F D+L+ F D T +I++ E G +A +F+ R KP+V +G+ Sbjct: 188 TLDVDFGDLLDYFATDYRTRAILLYVERIG----DARKFMSAARAAARAKPVVVVKSGRQ 243 Query: 248 APPG-RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 HA A+ G A AG+ + + + E LG L Sbjct: 244 YRINPNADTHAQALA----GSDAVYGAAFARAGLLRVGALDELFAA-AETLGRL 292 >gi|297582496|ref|YP_003698276.1| FdrA family protein [Bacillus selenitireducens MLS10] gi|297140953|gb|ADH97710.1| FdrA family protein [Bacillus selenitireducens MLS10] Length = 519 Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 95/233 (40%), Gaps = 16/233 (6%) Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 T ++ AN ++I V A +++ + ++ ++ + V D R+K Sbjct: 105 NTKEALRDHEEANLAIISVSGEFAAREAEIALKKGLH-VMIFSDNVSVEDERRLKELGRN 163 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + + G+ + R+G++G+++ SGT E Q + G G S Sbjct: 164 KGLFVMGPDCGTAILNGT---GLCFANSVRRGNIGLVAASGTGLQEVTVQIDRLGGGVSQ 220 Query: 180 AVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 +G GG + G + ++ D T+ IV++ + ++ + ++ K R Sbjct: 221 GIGTGGRDLSKDIGGLMMLQGIKALEEDPDTDVIVLISKPPAKEVQD---LVLEQVKASR 277 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 K ++ F+ G A AGA+ K A+ + G PA Sbjct: 278 KPVVISFIDGDPA----AAVSAGAIFGYSLTDTAIKAVALSK-GEEAPDKPAD 325 >gi|262089241|gb|ACY24463.1| CoA-binding domain-containing protein [uncultured crenarchaeote 29d5] Length = 706 Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 63/309 (20%), Positives = 114/309 (36%), Gaps = 30/309 (9%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M + + + L+ G + + G + G ++P Y + V + Sbjct: 249 MDLFFNAKSVALI-GASPEIGKIGNSVMESLAKHDYKGKVYPVNAKGY--PEIMGVKAYK 305 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL---DMVRVKA-- 115 + + + ++ V D ++E + I +V I+ G L K Sbjct: 306 NLMDI--EDPVDVVIVTVDLKYVPDLLVECGKKNIHNMVIISGGGKELGGERAAIEKRVQ 363 Query: 116 -RLEKSSSRLIGPNCPGILT----PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 + R+IGPNC GI D G + ++G+V LS+SGT+ F Sbjct: 364 DLSRELKVRIIGPNCIGIFNGENRLDCAFQGHLRMLRPKQGNVSFLSQSGTVG--IAFME 421 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL--K 228 + + G S + G + D++ D +T I + E G + +F+ Sbjct: 422 TSDAFGLSKMISYGNR--SDVDEADMIHYLAQDPSTNVIGLYVEGLG----DGRKFMNSA 475 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGICIAPSPA 287 + +KPIV F G++ + A +G GG+ I+ A ++ GI S Sbjct: 476 KNVIKQYQKPIVVFKNGRSTKGAKQ----AASHTGSLGGSFAVISGAFEQTGIISVDSYE 531 Query: 288 RIGRSLVEL 296 + SL L Sbjct: 532 ELTSSLKAL 540 >gi|332797732|ref|YP_004459232.1| acetyl coenzyme A synthetase alpha domain-containing protein [Acidianus hospitalis W1] gi|332695467|gb|AEE94934.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Acidianus hospitalis W1] Length = 660 Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 92/239 (38%), Gaps = 20/239 (8%) Query: 59 FTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK--- 114 + KE + ++I VP A + + +++E + + IT G + K Sbjct: 53 MKSYKTLKEIPGDVDLAIISVPRQFAVEVMEDAVEKGVKASIVITSGFREVGDEGAKLEE 112 Query: 115 ---ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + +K R++GPN G+++PD G + ++G + ++ +SG + + Sbjct: 113 ELISTAKKGGIRVLGPNTMGLISPD--FNGTFAYANVQRGEIALVVQSGGIGAYMLDWAQ 170 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + G S V +G + +V++ D T +I + E E +FL Sbjct: 171 RTRTGISFLVSMGNQA--DVKEYEVIDYLSRDPETRAIFVYLEGVADGE----KFLDVVP 224 Query: 232 KRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +KP+V G TA + H G++ G E A+K G + Sbjct: 225 DAASRKPVVFIKGGATAKGAEAVKTHTGSLA----GSYEVFKAAIKTVGGIFVEDLSDF 279 >gi|16128305|ref|NP_414854.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli str. K-12 substr. MG1655] gi|89107193|ref|AP_000973.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli str. K-12 substr. W3110] gi|170021298|ref|YP_001726252.1| FdrA family protein [Escherichia coli ATCC 8739] gi|170079943|ref|YP_001729263.1| acyl-CoA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|256024055|ref|ZP_05437920.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia sp. 4_1_40B] gi|300916506|ref|ZP_07133239.1| bacterial FdrA protein [Escherichia coli MS 115-1] gi|300946449|ref|ZP_07160724.1| bacterial FdrA protein [Escherichia coli MS 116-1] gi|300955472|ref|ZP_07167840.1| bacterial FdrA protein [Escherichia coli MS 175-1] gi|301017802|ref|ZP_07182451.1| bacterial FdrA protein [Escherichia coli MS 196-1] gi|301645426|ref|ZP_07245366.1| bacterial FdrA protein [Escherichia coli MS 146-1] gi|307136968|ref|ZP_07496324.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli H736] gi|331640837|ref|ZP_08341972.1| putative oxidoreductase subunit [Escherichia coli H736] gi|2495512|sp|P77187|YAHF_ECOLI RecName: Full=Uncharacterized protein yahF gi|1657518|gb|AAB18046.1| FdrA-like protein [Escherichia coli str. K-12 substr. MG1655] gi|1786513|gb|AAC73423.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli str. K-12 substr. MG1655] gi|85674463|dbj|BAE76103.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli str. K12 substr. W3110] gi|169756226|gb|ACA78925.1| FdrA family protein [Escherichia coli ATCC 8739] gi|169887778|gb|ACB01485.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli str. K-12 substr. DH10B] gi|260450488|gb|ACX40910.1| FdrA family protein [Escherichia coli DH1] gi|299882658|gb|EFI90869.1| bacterial FdrA protein [Escherichia coli MS 196-1] gi|300317611|gb|EFJ67395.1| bacterial FdrA protein [Escherichia coli MS 175-1] gi|300416180|gb|EFJ99490.1| bacterial FdrA protein [Escherichia coli MS 115-1] gi|300453910|gb|EFK17530.1| bacterial FdrA protein [Escherichia coli MS 116-1] gi|301076295|gb|EFK91101.1| bacterial FdrA protein [Escherichia coli MS 146-1] gi|309700585|emb|CBI99881.1| conserved hypothetical protein [Escherichia coli ETEC H10407] gi|315135006|dbj|BAJ42165.1| predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain [Escherichia coli DH1] gi|323938726|gb|EGB34974.1| bacterial FdrA protein [Escherichia coli E1520] gi|323943400|gb|EGB39553.1| FdrA protein [Escherichia coli E482] gi|331037635|gb|EGI09855.1| putative oxidoreductase subunit [Escherichia coli H736] gi|332341682|gb|AEE55016.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 515 Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 47/228 (20%), Positives = 99/228 (43%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 101 YATIGSAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 160 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 216 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE I ++ + A A+ + + A+ Sbjct: 217 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPA---VARKVLERARA 273 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 RK +V F+ P +G E + A+ +G+ Sbjct: 274 CRKPVVVCFLDRGETPVDEQGLQFA------RGTKEAALKAVMLSGVK 315 >gi|317151925|ref|YP_004119973.1| CoA-binding domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316942176|gb|ADU61227.1| CoA-binding domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 901 Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 86/245 (35%), Gaps = 16/245 (6%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL---DMVRVKA 115 + +V + + +V+ P + I E V + G + + + +KA Sbjct: 60 YPSVKMLPK--TPDLAVVCSPLDEVPEIIHSLKEGGTRGAVLMGSGFSGMSKEERLDIKA 117 Query: 116 ----RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 R++GP G + P + + G V +S+S +L + Sbjct: 118 TILKIANPPDIRILGPKSLGFMVPSLNLNASLAHANATPGKVAFISQSDSLFATVLDWAL 177 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +G+G S V +G F D+L+ +D T SI++ E + ++A F+ Sbjct: 178 AKGVGFSHMVALGSR--IDVSFADILDYLASDPLTRSIMLYVE----SIKDARAFMSAAR 231 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 R KP++ G+ A G A A + AG+ + + Sbjct: 232 AASRNKPVLVIRPGQALDTVLDEHKAWESGDHRLGDA-IYDVAFRRAGMLRVENIDGLFD 290 Query: 292 SLVEL 296 + L Sbjct: 291 AAQTL 295 >gi|295700722|ref|YP_003608615.1| GCN5-related N-acetyltransferase [Burkholderia sp. CCGE1002] gi|295439935|gb|ADG19104.1| GCN5-related N-acetyltransferase [Burkholderia sp. CCGE1002] Length = 821 Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 101/276 (36%), Gaps = 43/276 (15%) Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 PV + V++ + +VI PP+ I + ++ + E D + ++ Sbjct: 58 PVISDVSDLPQAP--TVAVICTPPATWPSLIHKLGGMGTRAVIIVGEVRSDEDRLELRHA 115 Query: 117 L---EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 L R++GP G+++P P + G V +S+S LT + Sbjct: 116 LSAARPHLLRIVGPGSLGVVSPALGAHLGAPSCTVKAGGVAWVSQSNALTNAVLGWARAR 175 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 GLG S AV +G + + DVL+ +D T +I++ + + A +F+ Sbjct: 176 GLGFSHAVALGAEA--DVDAGDVLDYLASDPGTRAILIELDSVRA----ARKFMSAARAA 229 Query: 234 GRKKPIVGFVAGKTAP--------------------------------PGRTMGHAGAVI 261 R KP++ +G+ P G +I Sbjct: 230 ARNKPVLALRSGRDDPADGLYTAAFRRAGLVRVDALDDLLDEIETLGVGRVAAGATATLI 289 Query: 262 SGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 + +G A +A AG +AP PA +L E L Sbjct: 290 TSDRGLATLARDAFSAAGGLLAPWPAAASDALREAL 325 >gi|256375606|ref|YP_003099266.1| CoA-binding domain protein [Actinosynnema mirum DSM 43827] gi|255919909|gb|ACU35420.1| CoA-binding domain protein [Actinosynnema mirum DSM 43827] Length = 902 Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 105/264 (39%), Gaps = 27/264 (10%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPL 97 G ++P V + +V + + + +V+ VP +G + + + + Sbjct: 230 GPVYPVNAEHR---AVRGVRAYPSVLDIPD--DVDLAVVAVPAAGVDEVMDACLAKGVKA 284 Query: 98 IVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFR 149 +V +T G R+ R++GPN G++ PD + ++ Sbjct: 285 LVVVTSGFGETGPDGRTAERRLVTEARAHGMRVVGPNALGVVNTDPDVRLNATLAPTLPA 344 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 +G G +SG L + ++ GLG ST V G D+L+ + D AT+ + Sbjct: 345 RGRTGFFCQSGALGSAILATAAERGLGLSTFVSAGNRA--DVSGNDLLQYWETDPATDVV 402 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 ++ E G+ +F + + GR KPIV +G+ A A+ + E Sbjct: 403 LLYLESFGNP----RKFARLARRLGRSKPIVAVKSGRHAV-------TPALAATSVHVDE 451 Query: 270 DKINA-MKEAGICIAPSPARIGRS 292 + A ++AG+ S A++ + Sbjct: 452 QSVQALFEQAGVIRVESLAQLFDT 475 >gi|148978387|ref|ZP_01814881.1| hypothetical protein VSWAT3_02471 [Vibrionales bacterium SWAT-3] gi|145962413|gb|EDK27692.1| hypothetical protein VSWAT3_02471 [Vibrionales bacterium SWAT-3] Length = 894 Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 94/254 (37%), Gaps = 24/254 (9%) Query: 57 PVFTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 P + +VA + +++ + E E I ++ ++ + Sbjct: 47 PKYDSVAGVLSYKNILSLPIVPDLAILCTNATRNIAIFEELAEKGIASVIVLSSDMQQPS 106 Query: 110 MV------RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLT 163 R A +K + R++G N G++ P G + +S+S + Sbjct: 107 DNGETYDSRCLAIAKKHNIRMLGSNSLGVIIPWLNLNASFSPVTALPGKIAFVSQSAAVC 166 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 + + + +G S + IG EF ++L+ D TE+I++ + + ++A Sbjct: 167 TTILDWANDKEIGFSAFISIGNG--TDIEFSELLDYLSTDSHTEAILLYVD----SIKDA 220 Query: 224 AQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE-DKINAMKEAGICI 282 +F+ R + I+ G+TA A +GG + +A++ +G+ Sbjct: 221 RRFISAARAASRNRRILVLKGGRTAKG----RAAAMAHTGGADTLDIIYDSAIRRSGMLR 276 Query: 283 APSPARIGRSLVEL 296 + + ++ L Sbjct: 277 VKNLHELFAAVETL 290 >gi|315616747|gb|EFU97364.1| bacterial FdrA family protein [Escherichia coli 3431] Length = 497 Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 47/228 (20%), Positives = 99/228 (43%), Gaps = 18/228 (7%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ AK+ +N +VI V A ++++ ++ ++ ++ + V D + +K Sbjct: 83 YATIGSAKKHIPESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLA 141 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + + + G+ R+G++GI+ SGT + E + + G G Sbjct: 142 HEKGLLMMGPDCGTAIINGA---ALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGV 198 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + D TE I ++ + A A+ + + A+ Sbjct: 199 SQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPA---VARKVLERARA 255 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 RK +V F+ P +G E + A+ +G+ Sbjct: 256 CRKPVVVCFLDRGETPVDEQGLQFA------RGTKEAALKAVMLSGVK 297 >gi|262403617|ref|ZP_06080175.1| protein acetyltransferase [Vibrio sp. RC586] gi|262350121|gb|EEY99256.1| protein acetyltransferase [Vibrio sp. RC586] Length = 893 Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 103/286 (36%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q T V +P ++P+ + +++ Sbjct: 26 GNIVMKNLLQGGFDGATMPVTPYYPAVCGVLAYKTISDLPI-----------TPDIAILC 74 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 S + E + ++ ++ + + + S+ R++GPN G Sbjct: 75 THASRNVSLFKQLAEKGVKQVIVLSSDMYSLDAQGEEIQRQCMMIAKASNMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWIQFNGSFSPVSALKGNIAFISQSAAVCTTILDWANDKGIGFSAFISLGNA--SDV 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D+ T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTDKYTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|111022681|ref|YP_705653.1| acid--CoA ligase [Rhodococcus jostii RHA1] gi|110822211|gb|ABG97495.1| probable acid--CoA ligase [Rhodococcus jostii RHA1] Length = 687 Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 85/229 (37%), Gaps = 14/229 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + + VP D + E++ + + +T G+P + AR+ + +RL+G N Sbjct: 76 PDLVALCVPAPFVSDVVDEALTLGVRGFLGVTAGVP--GEAELAARIRSAGARLVGTNSL 133 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 GI + + F G + I+S+SG L E ++ G+G S V IG Sbjct: 134 GIYDSATDL--SLAWGRFTPGPLAIISQSGQLGSELAALGARHGVGVSRFVSIGNQ--SD 189 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 ++L + T I + E E L+ GR P + G +A Sbjct: 190 VTAAELLAELGGHDPTRVIALYLESFSDGESLFR-TLRALRDTGR--PTLLLTVGASAAS 246 Query: 251 GR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 R H G++ S + A + AG+ SP + L Sbjct: 247 TRLARSHTGSLTSAL----DVVDAACRAAGVLRVSSPDELITVARAFLS 291 >gi|261340883|ref|ZP_05968741.1| acetyltransferase, GNAT family [Enterobacter cancerogenus ATCC 35316] gi|288317315|gb|EFC56253.1| acetyltransferase, GNAT family [Enterobacter cancerogenus ATCC 35316] Length = 887 Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 99/278 (35%), Gaps = 23/278 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +AG + + V + P + +VP + + +V+ Sbjct: 26 RAGYLMMHNLLAGGFSGPVLPVTPAYKAVLGVLAWPDVPSLPFI--------PDLAVLCT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 + + + + ++ P + A + R++GPN G+L P Sbjct: 78 HAKRNLELLESLGQKGCKTCIILSS--PPEQQAELLACAGRFQMRILGPNSLGLLAPWQG 135 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 RKG + +S+S ++ + Q +G S + +G + ++L+ Sbjct: 136 LNASFSPVPIRKGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELLD 193 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E +A +F+ R KPI+ +G++ P + + H+ Sbjct: 194 FLARDSKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLHS- 247 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 SG + A++ AG+ + ++ L Sbjct: 248 --HSGMDPAWD---AAIQRAGLLRVQDTHELFSAVETL 280 >gi|258622705|ref|ZP_05717724.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258585018|gb|EEW09748.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 893 Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 103/286 (36%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q V +P ++P+ +A + N S+ Sbjct: 26 GNIVMKNLLQGGFDGAIMPVTPYYPAVCGVLAYKTIADLPIIPDIAILCTHASRNVSLF- 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 + E + ++ ++ + + A + + R++GPN G Sbjct: 85 ----------NQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMAIAKPAGMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWIHFNGSFSPVSALKGNIAFISQSAAVCTTILDWANDKGIGFSAFISLGNA--SDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D+ T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|258626981|ref|ZP_05721780.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258580734|gb|EEW05684.1| conserved hypothetical protein [Vibrio mimicus VM603] Length = 893 Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 103/286 (36%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q V +P ++P+ +A + N S+ Sbjct: 26 GNIVMKNLLQGGFDGAIMPVTPYYPAVCGVLAYKTIADLPIIPDIAILCTHASRNVSLF- 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 + E + ++ ++ + + A + + R++GPN G Sbjct: 85 ----------NQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMAIAKPAGMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWIHFNGSFSPVSALKGNIAFISQSAAVCTTILDWANDKGIGFSAFISLGNA--SDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D+ T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|262173767|ref|ZP_06041444.1| protein acetyltransferase [Vibrio mimicus MB-451] gi|261891125|gb|EEY37112.1| protein acetyltransferase [Vibrio mimicus MB-451] Length = 893 Score = 95.5 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 103/286 (36%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q V +P ++P+ +A + N S+ Sbjct: 26 GNIVMKNLLQGGFDGAIMPVTPYYPAVCGVLAYKTIADLPIIPDIAILCTHASRNVSLF- 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 + E + ++ ++ + + A + + R++GPN G Sbjct: 85 ----------NQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMAIAKPAGMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWIHFNGSFSPVSALKGNIAFISQSAAVCTTILDWANDKGIGFSAFISLGNA--SDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D+ T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|254168144|ref|ZP_04874991.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Aciduliprofundum boonei T469] gi|197622910|gb|EDY35478.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Aciduliprofundum boonei T469] Length = 711 Score = 95.5 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 95/266 (35%), Gaps = 24/266 (9%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK + + ++ + + + ++I VP E + + + Sbjct: 44 PVNPK------ADEVAGLKCYHSILDIPDE--VDIALIVVPAKIVPAVTEECGKKGVKGL 95 Query: 99 VCITEGIPVLDM----VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 V I G + V K R++GPN GI+ + G Sbjct: 96 VIIASGFSEVGREDLEREVVEIAHKYGMRILGPNVVGIMNNPLHMNASFGPYLPYPGKAA 155 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++S+SG L +T + +G S + IG + +F D++ F DE T I + E Sbjct: 156 MISQSGALLIAMDARTWVDKVGISHMISIGN--MADLDFGDLINYFNKDEDTNVISLYIE 213 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 ++ +FL A + KKPI+ AG + ++G E A Sbjct: 214 ----GVKDGRKFL--NACKNSKKPIIALKAGTSKRGAAAAASHTGSLAGSTKIYE---AA 264 Query: 275 MKEAGICIAPSPARIG-RSLVELLGS 299 K+ + A + + ++ L Sbjct: 265 FKQGHVVWAENLDALFDETMALALQK 290 >gi|317049244|ref|YP_004116892.1| GCN5-like N-acetyltransferase [Pantoea sp. At-9b] gi|316950861|gb|ADU70336.1| GCN5-related N-acetyltransferase [Pantoea sp. At-9b] Length = 885 Score = 95.5 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 99/279 (35%), Gaps = 23/279 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AG F + + V + PK G + P ++ A + ++I Sbjct: 25 GRAGYFMMRNLLAGGFSGPVLPVTPK---YKAVSGVLAWPDIASLP-----FAPDLAIIC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + E + ++ P + +KA + RL+GPN G+L P Sbjct: 77 THAKRNLTLLQQLGEKGCKACIILSA--PPDQLDELKACASQWQIRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 KG + +S+S ++ + Q LG S + +G + + L Sbjct: 135 GLNASFSPVPIAKGRIAFISQSAAVSNTILDWAQQRNLGFSWFIALGDSLDIDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G+ A Sbjct: 193 DFLARDGKTSAILLYLEHLS----DARRFVSASRSASRNKPILVIKSGR-------SHQA 241 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A+I G A++ AG+ + ++ L Sbjct: 242 QAMIGTRSGLDAAWDAAIQRAGLLRVQDTHELFSAVESL 280 >gi|254285192|ref|ZP_04960158.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|150425195|gb|EDN16972.1| conserved hypothetical protein [Vibrio cholerae AM-19226] Length = 893 Score = 95.5 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 103/286 (36%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q V +P ++P+ +A + N S+ Sbjct: 26 GNIVMKNLLQGGFDGAIVPVTPYYPAVCGVLAYKTISDLPIVPDIAILCTHASRNVSLF- 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 + E + ++ ++ + + A + + R++GPN G Sbjct: 85 ----------KQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMAIAKSVNMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWMQFNGSFSPVSALKGNIAFVSQSAAVCTTILDWANDKGIGFSAFISLGNA--SDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D+ T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|184201077|ref|YP_001855284.1| putative acetate--CoA ligase [Kocuria rhizophila DC2201] gi|183581307|dbj|BAG29778.1| putative acetate--CoA ligase [Kocuria rhizophila DC2201] Length = 896 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 89/233 (38%), Gaps = 24/233 (10%) Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSS 121 + ++I VP DA+ + A + +V +T G R+ + Sbjct: 261 EGPVDLALIAVPREAVEDAVTDCGRAGVRAVVVMTGGYAEDGLEGATAQRRLVRIARAAG 320 Query: 122 SRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R++GP G++ P+ + + R+G +G+ S+SG + + G+G S+ Sbjct: 321 MRVVGPASLGLINTDPEVSLNASVLPELPRRGGLGLFSQSGAVGTMLYGAALRHGVGVSS 380 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + G D+++ + D T + + G+ +F + + KP+ Sbjct: 381 YLSAGNRA--DVSGNDLMQHWEDDPGTTVCGLYLQSVGNP----RKFSRIARRLSLTKPV 434 Query: 240 VGF---VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + V G PPG H G V G + ++AG+ A + ++ Sbjct: 435 IVAKSEVTGLRLPPG----HTGRVTQAPAGALD---AMFRQAGVIRAATTEQL 480 >gi|323097747|emb|CBJ18435.1| ATP citrate lyase [uncultured bacterium] Length = 335 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 6/124 (4%) Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + IGGD G+ FID L + + ++++GE+GGS E + + +K KPI Sbjct: 1 CIAIGGDRFVGSVFIDNLLRLEKNPEVKYMILLGEVGGSEEYKVIEAIKA---GKLTKPI 57 Query: 240 VGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + G A G GHAGA + + AE K AM AG+ + S + + E+ Sbjct: 58 IAWCIGTIAKHYDSGVQFGHAGASANDDRETAETKNKAMAAAGMHVPASFNDLPAKIREV 117 Query: 297 LGSL 300 SL Sbjct: 118 YESL 121 >gi|85059888|ref|YP_455590.1| hypothetical protein SG1910 [Sodalis glossinidius str. 'morsitans'] gi|84780408|dbj|BAE75185.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 885 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 98/279 (35%), Gaps = 23/279 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AG + + V + PK V + +VA + +V+ Sbjct: 25 GRAGNLMMRNLLDGGFSGPVLPVTPK------YPAVCGVLSYPSVAALP--LPPDLAVVC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 D + E + ++ P ++A ++ RL+GPN G+L P Sbjct: 77 THGRRNVDLLTALGERGCKTAIVLSA--PATQFDDLRACAQRFGMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 +G + +S+S ++ + Q G S + +G + D+L Sbjct: 135 DLNASFSPVPIHRGKLAFISQSAAVSNTVLDWAQQRATGFSYFIALGDSIDIYVD--DML 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +FL R KPI+ +G+T A Sbjct: 193 DFLARDGKTSAILLHLEHLS----DARRFLSAARGAARNKPILVIKSGRTI-------QA 241 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +++ G A++ AG+ + ++ L Sbjct: 242 QRLLNYPPGRDAAYDAAIQRAGLLRVRDTHELFSAVETL 280 >gi|269124770|ref|YP_003298140.1| CoA-binding domain-containing protein [Thermomonospora curvata DSM 43183] gi|268309728|gb|ACY96102.1| CoA-binding domain protein [Thermomonospora curvata DSM 43183] Length = 887 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 99/259 (38%), Gaps = 19/259 (7%) Query: 35 QVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE 94 V ++P+ G VP +VAE E + +V+ VP A E Sbjct: 232 FPVYAVNPR-AGRELEGVRC-VP---SVAELPE--PPDLAVLTVPAHIVPQAAEECGRRG 284 Query: 95 IPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 +V I+ G+ R+ + RL+GPNC G+ P + R G+ G Sbjct: 285 ARALVVISSGLTEPQARRLLEACHRYGMRLVGPNCIGVADPGAGLDATFTPRDPRPGTAG 344 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++ +SG + S+ G+G S+ +G D+L + +D T V+ E Sbjct: 345 VVVQSGGVGIALQDHLSRLGIGISSFASVGDK--LDVSANDMLMWWESDGVTRLGVLHLE 402 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 G+ +F + + GRK P++ +AG++ R A ++ + Sbjct: 403 SFGNP----RKFARTARRVGRKMPLLTVIAGRSQAGRRAAASHTAAVATPEVTRRAL--- 455 Query: 275 MKEAGICIAPSPARIGRSL 293 +AGI +G + Sbjct: 456 FAQAGIVATD---DLGELV 471 >gi|163855516|ref|YP_001629814.1| Acetyl-CoA synthetase [Bordetella petrii DSM 12804] gi|163259244|emb|CAP41544.1| Acetyl-CoA synthetase [Bordetella petrii] Length = 704 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 92/264 (34%), Gaps = 23/264 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P G P T V + + ++I VP A+ + + Sbjct: 44 YSGPIYPINPKRDAIHGLKCYPSITAVDD-----DIDLAIISVPAQEVLSAVESCVAKRV 98 Query: 96 PLIVCITEGIPVLDMV------RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG---- 145 ++ + G +D R+ + L+GPNC G + + Sbjct: 99 SGVLIFSSGFSEVDEAGRILQERIVQLASEGGVALLGPNCAGTFNTRAGLLATFSSGILD 158 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 + GS+ +S+SG + + LG S + G + + L D Sbjct: 159 KPPQPGSISFVSQSGAFGINMLVLAGERDLGLSMCLTSGNQA--DVDVAEALAYMAQDPE 216 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK 265 TE I + I G + + + A+R R KP++ G++ R + A I+G Sbjct: 217 TEVIGVC--IEGIPDFDRFLAAIELARRNR-KPVIVLKLGRSEVGARAVASHTASIAGSD 273 Query: 266 GGAEDKINAMKEAGICIAPSPARI 289 + +++ +C A S + Sbjct: 274 EVFD---AILRQYSVCRAHSIEEL 294 >gi|14521625|ref|NP_127101.1| hypothetical protein PAB1431 [Pyrococcus abyssi GE5] gi|5458844|emb|CAB50331.1| acdA-4 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain [Pyrococcus abyssi GE5] Length = 442 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 94/261 (36%), Gaps = 24/261 (9%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK G+ G + + + S++ +P I E ++ Sbjct: 40 PVNPKGGTVEVAGRRFEI-------RKRLEEEVDVSIVVIPAKLVPGLIRE-LKGLTKGA 91 Query: 99 VCITEGIPVLDMVRV----KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 V I+ G + V + +++ R+IGPNC GI G + G + Sbjct: 92 VVISAGFSEVGNVDLEEELIKAAKEAGIRIIGPNCAGIFGVHGKFFGSFEVRV-NPGGLA 150 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++S+SG A+ ++E +G S V G + D L F DE T+ I + E Sbjct: 151 LISQSGAFGGAALAMGNEENVGFSAFVSYGNAA--DLDESDFLRYFADDENTKVIALYIE 208 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKIN 273 ++ +F + KKP++ AGK+ + H G++ G E Sbjct: 209 ----GVKDGRKFFEALKYATSKKPVIILKAGKSESGAKAAQSHTGSLA----GSYEIYKA 260 Query: 274 AMKEAGICIAPSPARIGRSLV 294 K+ + + Sbjct: 261 VFKQGNAIEVEEMEELFDAAK 281 >gi|62199504|gb|AAX76834.1| ATP citrate lyase alpha subunit [Sulfurimonas denitrificans] Length = 339 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 6/124 (4%) Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + IGGD G+ FID L A+ + ++++GE+GG+ E + + +K KKPI Sbjct: 1 CIAIGGDRFVGSVFIDNLLRMEANPEVKYMLLLGEVGGTEEYKVIEAVK---SGKIKKPI 57 Query: 240 VGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + G A G GHAGA +G AE K AMKE GI + S + + L Sbjct: 58 IAWCIGTIAKYYDSGVQFGHAGASANGDMETAEAKNRAMKEVGIHVPASFNDLPEIISAL 117 Query: 297 LGSL 300 L Sbjct: 118 YHEL 121 >gi|13542064|ref|NP_111752.1| Acyl-CoA synthetase (NDP forming) [Thermoplasma volcanium GSS1] gi|14325495|dbj|BAB60399.1| succinyl CoA synthetase alpha subunit [Thermoplasma volcanium GSS1] Length = 693 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 94/263 (35%), Gaps = 24/263 (9%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P G + + ++ + + + +++ +P A E + Sbjct: 37 YKGKIYPIN---TKDGTILGYKAYPSILDVPDE--VDLAILSIPAKYTPQAAEECGRKGV 91 Query: 96 PLIVCITEGIPVLDMV----RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 I+ + G + ++ +K RL+GPN G++ + G Sbjct: 92 FGIIVVASGFSEVGNKDLEDQLANTCKKYGVRLLGPNVVGLMNNVIKLNASFAPYLPYPG 151 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 ++G++S+SG L T G S + IG + +F D++ DE I + Sbjct: 152 TIGMISQSGALIVGLDAMTWANKTGTSFLISIGN--MADLDFSDLVTFLADDENVSCISL 209 Query: 212 VGEIGGSAEE--EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 E + + + A+ + KPIV +G + ++G + Sbjct: 210 YAEGLKAGRKFVDTARLI--------NKPIVMLKSGVSKHGSVAAASHTGSLAGSHRVYD 261 Query: 270 DKINAMKEAGICIAPSPARIGRS 292 A+K+AG+ A S + Sbjct: 262 ---GALKQAGVIRAYSIEELFDL 281 >gi|297563049|ref|YP_003682023.1| CoA-binding protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847497|gb|ADH69517.1| CoA-binding domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 719 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 93/276 (33%), Gaps = 21/276 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + + V ++PK Y + +V + + +V Sbjct: 283 GKIGHSVIKNIVDGGYAGEVYPVNPKSPEVYGRTA------YASVLDIP--GEVDVAVFA 334 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR----VKARLEKSSSRLIGPNCPGIL 133 +P A+ E V I G V A + RL+GPN G Sbjct: 335 IPAKFVAGALEEVGTKGAAAAVLIPSGFAETGEQELQDEVLAVARRHGVRLLGPNIYGYY 394 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 G + S+SG + + + G S VG+G + Sbjct: 395 YTPEKLSATFCTPYDVSGGTALTSQSGGIGMAILGYSRSTSTGVSAIVGVGNKADIDED- 453 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 D+L F DE T ++ M E ++ F++ + KP++ AG+T R Sbjct: 454 -DLLTFFGQDENTNAVAMHLEDL----KDGRAFVEAAREVVPHKPVIVLKAGRTDAGARA 508 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G ++G +D +++AG+ AP + Sbjct: 509 AGSHTGALAGDDKVYDD---ILRQAGVVRAPGLNEL 541 >gi|218782210|ref|YP_002433528.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218763594|gb|ACL06060.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 694 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 93/266 (34%), Gaps = 28/266 (10%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 GGI+P +++ + +V + + + ++++VP + E E I Sbjct: 35 FKGGIYPINPGY---DSILDLKCYPSVKDVPD--PVDLAILFVPAKAVPKMVEECGERGI 89 Query: 96 PLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI-- 147 ++ + G A ++ R+ GPNC G++ + + Sbjct: 90 RAVMIQSAGFSETGPEGKALQDEVDAVAQRHGIRVWGPNCLGMVDSVNHNVFSFAAPSMW 149 Query: 148 ---FRKGSVGILSRSGTL-TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLAD 203 G+V ++ +SG L + S +G S IG + D+LE ++D Sbjct: 150 DVGHIPGNVSLIVQSGMLAGGFLIDNMSHGTMGMSKVCSIGNK--SDVDECDLLEYLISD 207 Query: 204 EATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISG 263 T++I M E A E R KPIV G + + A +SG Sbjct: 208 PDTQAIGMYLEAIPRGRRFA------ELCRQSPKPIVVLKGGTSTAGAKAAASHTASMSG 261 Query: 264 GKGGAEDKINAMKEAGICIAPSPARI 289 + + G+ A ++ Sbjct: 262 DGAIVSGVLA---QCGVVEARDFKQM 284 >gi|323497224|ref|ZP_08102244.1| hypothetical protein VISI1226_01655 [Vibrio sinaloensis DSM 21326] gi|323317799|gb|EGA70790.1| hypothetical protein VISI1226_01655 [Vibrio sinaloensis DSM 21326] Length = 894 Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 96/265 (36%), Gaps = 24/265 (9%) Query: 46 STYWTGGNVNVPVFTTVAEAKER-------TAANASVIYVPPSGAGDAIIESIEAEIPLI 98 + P +++V + +VI S E + + Sbjct: 36 GGFEGAIMPVTPKYSSVCGVLAYRSIVDLPVVPDVAVICTNASRNVALFRELAIKNVKTV 95 Query: 99 VCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 + ++ + + D A + + R++GPN GI+ P + +KG Sbjct: 96 IVLSADMHLADTDGGSIQDACLAIAKAADMRVLGPNSLGIILPWANFNASFSPVTAQKGK 155 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 + +S+S + + + + +G S V +G +F D+L+ D TE+I++ Sbjct: 156 IAFISQSAAMCTTILDWANDKDIGFSAFVSLGNA--LDIDFADLLDFLSTDSHTEAILLY 213 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED-K 271 + ++A +F+ R + I+ G+TA A +GG + Sbjct: 214 VDTI----KDARRFMSAARAASRNRRILVLKGGRTAAG----RKAAKAHTGGTDTLDVIY 265 Query: 272 INAMKEAGICIAPSPARIGRSLVEL 296 +A++ G+ + + ++ L Sbjct: 266 DSAIRRTGMLRVNNSHELFAAVETL 290 >gi|229527571|ref|ZP_04416962.1| protein acetyltransferase [Vibrio cholerae 12129(1)] gi|229333933|gb|EEN99418.1| protein acetyltransferase [Vibrio cholerae 12129(1)] Length = 893 Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 103/286 (36%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q V +P ++P+ +A + N S+ Sbjct: 26 GNIVMKNLLQGGFDGAIMPVTPYYPAVCGVLAYKTISDLPIVPDIAILCTHASRNVSLF- 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 + E + ++ ++ + + A + + R++GPN G Sbjct: 85 ----------KQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMAIAKSVNMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWMQFNGSFSPVSALKGNIAFVSQSAAVCTTILDWANDKGIGFSAFISLGNA--SDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D+ T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|50122440|ref|YP_051607.1| putative acyl-CoA synthetase [Pectobacterium atrosepticum SCRI1043] gi|49612966|emb|CAG76417.1| putative acyl-CoA synthetase [Pectobacterium atrosepticum SCRI1043] Length = 882 Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 101/279 (36%), Gaps = 22/279 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AG + + + V + PK V ++TVA + +VI Sbjct: 25 GRAGFLMMKNLLDGHFSGPVLPVTPK------YRAVCGVLAYSTVASLP--ITPDLAVIC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E + ++ ++ P +K + + RL+GPN G+L P Sbjct: 77 TNASRNLTLLEELGQKGCKTVIILSA--PPTQFSELKTCAVRYNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 KG + +S+S ++ + Q G+G S + +G + + L Sbjct: 135 GLNASFSPVPIMKGKLAFISQSAAVSNTILDWAQQRGIGFSYFIALGDSLDIDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +FL R KPI+ +G++ + Sbjct: 193 DFLARDGKTSAILLHLEHIS----DARRFLSASRSASRNKPILVIKSGRS----QQAQQL 244 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G A D A++ AG+ + ++ L Sbjct: 245 LNDQRHGLDAAYD--AAIQRAGLLRVRDTHELFSAVETL 281 >gi|204929498|ref|ZP_03220572.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321217|gb|EDZ06417.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|322613368|gb|EFY10310.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620428|gb|EFY17293.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625104|gb|EFY21933.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629452|gb|EFY26228.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633839|gb|EFY30578.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635445|gb|EFY32156.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639879|gb|EFY36558.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644235|gb|EFY40779.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649927|gb|EFY46347.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654890|gb|EFY51207.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658182|gb|EFY54448.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661746|gb|EFY57964.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669727|gb|EFY65873.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673266|gb|EFY69371.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322674945|gb|EFY71032.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682968|gb|EFY78986.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685629|gb|EFY81624.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323191943|gb|EFZ77181.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200424|gb|EFZ85505.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201323|gb|EFZ86390.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208394|gb|EFZ93334.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211531|gb|EFZ96369.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215962|gb|EGA00694.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221743|gb|EGA06151.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225649|gb|EGA09876.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229367|gb|EGA13491.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235318|gb|EGA19402.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237496|gb|EGA21559.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245251|gb|EGA29252.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246476|gb|EGA30457.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253993|gb|EGA37815.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259043|gb|EGA42691.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261966|gb|EGA45531.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267749|gb|EGA51230.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269692|gb|EGA53144.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 886 Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 95/279 (34%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +++ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVMAWPDIASLP-----FTPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + + ++ P + A RL+GPN G+L P Sbjct: 77 TNASRNLALVDALGAKGCKTCIILSA--PTSQHEELLACARHYKMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 SAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|297565072|ref|YP_003684044.1| GCN5-like N-acetyltransferase [Meiothermus silvanus DSM 9946] gi|296849521|gb|ADH62536.1| GCN5-related N-acetyltransferase [Meiothermus silvanus DSM 9946] Length = 775 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 96/271 (35%), Gaps = 39/271 (14%) Query: 30 LYCQTQVVGGIHPK----KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGD 85 +Y + G G + P +V + +VI VPP Sbjct: 240 VYPVNPAASQVTAGSAQANGEVLVVGSILAYP---SVKAIP--GPVDLAVITVPPDQVIA 294 Query: 86 AIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD-SCKIGIMP 144 A + + +V +T G+ + + RL+GP G++ ++ Sbjct: 295 AAESCGQRGVRALVVVTVGLCAGQIKSLGEVCRSYGMRLVGPGSLGLVHTHPEVRLAAGL 354 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 + +G + + S+SG L + + GLG S+ V +G + D+++ + D Sbjct: 355 AGMPPRGRLALSSQSGALGLAVLEYAREMGLGISSFVSLGAKADVSSN--DLIQFWEDDP 412 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 T I++ E G+ +F + + GR+KPI+ G+ Sbjct: 413 ETGVILLYIENFGNP----RRFARLARRVGRQKPILVVRPGR------------------ 450 Query: 265 KGGAEDKINA-MKEAGICIAPSPARIGRSLV 294 + ++ A ++ G+ A S + + Sbjct: 451 ----DPRVEALFQQTGVIRADSLEEVFDTAA 477 >gi|220912390|ref|YP_002487699.1| CoA-binding protein [Arthrobacter chlorophenolicus A6] gi|219859268|gb|ACL39610.1| CoA-binding domain protein [Arthrobacter chlorophenolicus A6] Length = 894 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 92/231 (39%), Gaps = 24/231 (10%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP------VLDMVRVKARLEKSSSR 123 +VI VP + + A + +V + G + + + S R Sbjct: 261 PVQLAVIAVPYEEVLSVVEDCAAAGVKGLVIASAGFADDGERGLQRQRNLVRQARASGMR 320 Query: 124 LIGPNCPGIL--TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +IGP GI+ P+ M ++ R+G +G+ S+S + +S+ LG ST + Sbjct: 321 VIGPASLGIINTHPEVRLNASMAPTLPRRGGLGLFSQSAAIGVSLYAASSRRRLGISTFL 380 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G D+++ + D T ++ + E G+ +F + + R KP++ Sbjct: 381 SAGNRA--DVSGNDIMQYWEDDADTSAVGLYLESIGNP----RKFSRIARRLARTKPVIV 434 Query: 242 FVA---GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + G PPG + A GGA D + ++++G+ + ++ Sbjct: 435 AKSDTMGLRLPPGHAVRTTQA-----PGGALDSM--LRQSGVIRVETIEQL 478 >gi|297580378|ref|ZP_06942305.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297536024|gb|EFH74858.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 893 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 102/286 (35%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q V +P ++P+ +A + N S+ Sbjct: 26 GNIVMKNLLQGSFDGAIMPVTPYYPAVCGVLAYKTISDLPIVPDIAILCTHASRNVSLF- 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 + E + ++ ++ + + + + R++GPN G Sbjct: 85 ----------KQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMTIAKSVNMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWMQFNGSFSPVSALKGNIAFVSQSAAVCTTILDWANDKGIGFSAFISLGNA--SDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D+ T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|34604716|gb|AAQ79811.1| acetyl-CoA synthetase (ADP-forming) alpha subunit [Haloarcula sp. D1] Length = 453 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 57/289 (19%), Positives = 106/289 (36%), Gaps = 33/289 (11%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G A+ + ++P G VP +V + + + ++ Sbjct: 17 GKIGYEAMANAMEFDGPVY--PVNPSS-----DGDLFGVPFVDSVTDIDD--DVDLALCC 67 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPG 131 VP D + E EA + +V G V E+ L+GPN G Sbjct: 68 VPGPATPDVVAECGEAGVGAVVIYAGGFAEAGDEGERLQRAVVETAEEYGISLLGPNTSG 127 Query: 132 ILTPDSCKIGIMPGSIFR--KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 + P + + + +G+ ++++SG + + FQ+ ++G G S VG+G Sbjct: 128 FVVPATDLLCSFASGAEKLPEGNTAVIAQSGGIAHVLAFQSRRQGRGVSAMVGLGNRANV 187 Query: 190 GTEFIDVLELFLADEATESIVMV--GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 G F + +E F D+ T++IV+ G G EA + P++ + G++ Sbjct: 188 G--FTETIEYFDGDDRTDAIVLHVEGTDDGRGLLEACR--------DSDTPVIAYKVGQS 237 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 H GA+ G E + G+ + + + L Sbjct: 238 DVGEFAESHTGALT----GDHELYTAGFAQYGVPTVTATDELLDAAAAL 282 >gi|326332439|ref|ZP_08198715.1| acetyltransferase, GNAT family [Nocardioidaceae bacterium Broad-1] gi|325949752|gb|EGD41816.1| acetyltransferase, GNAT family [Nocardioidaceae bacterium Broad-1] Length = 763 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 87/229 (37%), Gaps = 19/229 (8%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSR 123 + +V+ VP + + E + + +V ++ G V A S R Sbjct: 108 PVDLAVLAVPAAEVAKVVRECAQGGVRDVVILSSGFAEAGPEGQRLQDEVLAIARGSGMR 167 Query: 124 LIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 ++GPNC G+ PD +G V ++++SG + A+ + + G+G S + Sbjct: 168 VVGPNCLGVANTDPDVRLDATFSPMSAGRGRVAMMTQSGAVGIAALQRAEELGVGLSAFI 227 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G D+L D AT+ + + E G+ +F + + KP+V Sbjct: 228 SSGNKADVSCN--DLLMYAAEDHATDVVALYLESFGNP----RKFSRLARRLSADKPVVA 281 Query: 242 FVAG-KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 V G A +GH + ++ A+ ++ G+ ++ Sbjct: 282 LVGGSSHAGRQGALGHTASAVT----SADAVDALFRQCGVIGVDGLEQL 326 >gi|295395840|ref|ZP_06806028.1| GNAT family acetyltransferase [Brevibacterium mcbrellneri ATCC 49030] gi|294971375|gb|EFG47262.1| GNAT family acetyltransferase [Brevibacterium mcbrellneri ATCC 49030] Length = 901 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 56/271 (20%), Positives = 100/271 (36%), Gaps = 31/271 (11%) Query: 43 KKGSTYWTGGNVNVPVFTTVAEAKE----RTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 KG + + PV + K + ++I VP D + ++ + + Sbjct: 225 FKGDLHIVHPHA--PVVAGMPTVKSLQDIEGTIDLAIIAVPAPAVVDVVKDAASRGVRAV 282 Query: 99 VCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTP--DSCKIGIMPGSIFRK 150 V I+ G V A R++GPN GI D + Sbjct: 283 VVISSGFAETGPEGQELQREVVATARSHGMRVVGPNSFGIANTSTDVALNASLSPFFPEP 342 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G +G+ S+SG L + GLG ST V G D+L+ + DE+T+ + Sbjct: 343 GPLGLFSQSGALGTGLLAAAKSRGLGISTFVSAGNRA--DLSGNDLLQFWEEDESTQIVG 400 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV---AGKTAPPGRTMGHAGAVISGGKGG 267 + E G+ +F + + R+KP++ G+ PPG + +S G Sbjct: 401 LYLESIGNP----RKFARIARRVARQKPVIVIKSDLTGRELPPGHQVR-----VSSLSGS 451 Query: 268 AEDKINAMKEAGICIAPSPARIGRSLVELLG 298 A + +AG+ A S ++ + ++ Sbjct: 452 A--LNQVLTQAGVIRADSIHQMFD-VAQVFA 479 >gi|145591207|ref|YP_001153209.1| CoA-binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282975|gb|ABP50557.1| CoA-binding domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 484 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 97/268 (36%), Gaps = 21/268 (7%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK G V + + E V+ P + ++ A Sbjct: 40 AVNPKYRRGEVGGVEVQF--YESATNLPEAPE--LVVVATPAEITPRVVDDAGRAGAKAA 95 Query: 99 VCITEGIPVLDMVRVKARL----EKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRK 150 + ++ G + ++ L +K R++GPNC G+ D+ + + + Sbjct: 96 IVVSGGFSEIGRRDLENELVKTAQKHGMRVLGPNCIGVYNAFNGLDTMFLPVEKAARPPP 155 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G + LS+SG + A+ + EG+G AV G D +E + I Sbjct: 156 GPIAFLSQSGAVMTAALDWAAGEGIGVGIAVNFGNRA--DVTEADFIEFLANSKEISVIA 213 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + E +AA+FLK + KP+V + AG+ + A + + G E Sbjct: 214 LYLEGFRWK-GDAARFLKVAKRSS--KPVVVYKAGR---GSDSARAAASHTAAMAGAYEM 267 Query: 271 KINAMKEAGICIAPSPARIGRSLVELLG 298 ++AG+ A + + + L Sbjct: 268 YHALFRQAGVIEADDLVELFD-MAKALA 294 >gi|300784326|ref|YP_003764617.1| acetyl-CoA synthetase [Amycolatopsis mediterranei U32] gi|299793840|gb|ADJ44215.1| acetyl-CoA synthetase [Amycolatopsis mediterranei U32] Length = 893 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 95/265 (35%), Gaps = 25/265 (9%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P V + +V + + + +V+ VP + + + Sbjct: 231 FTGTVYPVNQEHR---SVRGVRAYPSVLDIPD--PVDLAVVAVPAEAVESVLDACLAKGV 285 Query: 96 PLIVCITEGIPVLDMVRVKARLE------KSSSRLIGPNCPGILT--PDSCKIGIMPGSI 147 ++ ++ G + A L R++GPN G+L P + + Sbjct: 286 KTLLILSSGFAEAGPRGLHAELRLVGEARAHGMRVVGPNALGVLNTAPGIRLNATLAPRL 345 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 +G G +SG L + GLG ST V G D+L+ + D T+ Sbjct: 346 PGRGRTGFFCQSGALGTAILADAEARGLGLSTFVSAGNRA--DVSGNDLLQYWETDPDTD 403 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 +++ E G+ +F + + R KPIV +G+ A A + Sbjct: 404 LVLLYLESFGNP----RKFARLARRLARTKPIVAVKSGRHAV----RPQLAATSTEIDEA 455 Query: 268 AEDKINAMKEAGICIAPSPARIGRS 292 + + ++AG+ S A++ + Sbjct: 456 SVQTL--FEQAGVVRVESLAQLFDT 478 >gi|145594009|ref|YP_001158306.1| GCN5-related N-acetyltransferase [Salinispora tropica CNB-440] gi|145303346|gb|ABP53928.1| GCN5-related N-acetyltransferase [Salinispora tropica CNB-440] Length = 868 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 104/287 (36%), Gaps = 34/287 (11%) Query: 21 GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPP 80 G Y T V +HP +P + + AE + +V+ VPP Sbjct: 213 GAAVLGHLRDYGFTGAVVPVHPS------ARMVAGLPAYPSAAE--AGLPVDLAVVAVPP 264 Query: 81 SGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILT 134 + + ++ A +V I+ G R+ + R+IGPNC G+ Sbjct: 265 AAMETVVADAAGAGAHGLVVISAGFAEAGVDGAVAQRRLVRAAHAAGMRIIGPNCLGMAN 324 Query: 135 PDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 + + + G VG+ S+SG + + + GLG S+ V G Sbjct: 325 TSTEVRLNATLAPRLPIPGRVGLFSQSGAFGVALLAEVERRGLGLSSFVSAGNRA--DVS 382 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA---- 248 D+L+ + D +T+ I++ E G+ +F + GR+KPIV A Sbjct: 383 GNDLLQYWQDDPSTDVILLYLETFGNP----RKFARLARGIGREKPIVALAPSAHAFDLG 438 Query: 249 ------PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 MG AG +G A + ++G+ + A + Sbjct: 439 PLTGLDEVTAGMGAAGPSAAGPDEAAVSAL--FAQSGVIRVDTVAEL 483 >gi|50084972|ref|YP_046482.1| pimeloyl-CoA synthetase [Acinetobacter sp. ADP1] gi|49530948|emb|CAG68660.1| pimeloyl-CoA synthetase [Acinetobacter sp. ADP1] Length = 701 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 81/229 (35%), Gaps = 20/229 (8%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRL 124 A+ +++ VP S A+ E + I + + G + ++S+ RL Sbjct: 70 ADVALLAVPASATVQAVRECAQKGIQTAIVFSAGFAEAGEDGHQMQQEMLNAAKESNLRL 129 Query: 125 IGPNCPGILTPDSCKIGIMP----GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +GPNC G+ G G G+V I+S+SG Q GLG Sbjct: 130 LGPNCLGVFNAYKKFYGTFSTVLDGDFIEPGAVSIVSQSGAYGSHIAHLCRQRGLGIGYW 189 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 V G + + D L + + ++ E +F++ K R + Sbjct: 190 VTTGNE--CDIDLSDALNWVVDQPEVKVVLAYAE----GIRHRDRFIQALEKAQRNNVAI 243 Query: 241 GFV-AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 F+ G++ + A ++G + +++ G+ A + Sbjct: 244 IFMKVGRSEVGAKAASSHTAALAGSNAVFDAV---LRQYGVIRAKTTTE 289 >gi|33591854|ref|NP_879498.1| putative acetyl-CoA synthetase [Bordetella pertussis Tohama I] gi|33571497|emb|CAE44987.1| putative acetyl-CoA synthetase [Bordetella pertussis Tohama I] gi|332381271|gb|AEE66118.1| putative acetyl-CoA synthetase [Bordetella pertussis CS] Length = 713 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 100/277 (36%), Gaps = 31/277 (11%) Query: 24 HTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGA 83 H Y T + ++P++ G + VP + +++ +P Sbjct: 45 HYVTRNGYRGTVI--PVNPRRAE---VAGLLAVP------SIAHLGPVDVAILALPVDMI 93 Query: 84 GDAIIESIEAEIPLIVCITEGIPVL------DMVRVKARLEKSSSRLIGPNCPGILTPDS 137 AI E A + V ++ G L R+ ++ RL+GPNC GI+ P Sbjct: 94 EQAIGECAAAGVGACVIVSAGFAELGDEGVARQDRIVRIAREAGMRLVGPNCMGIINPHH 153 Query: 138 CKIGI----MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 + G++G++S+SG L + +E + S V +G E Sbjct: 154 RMALTSSLVVEQGELLPGNIGLISQSGALMVSMYDRACREQIRFSACVSLGNQ--CDLEI 211 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 D E + D T I M E A+ + + G KP++ G+TA Sbjct: 212 CDFFEYMIDDPLTRVITMYVEGF-VDTGRFAKLARRAQRAG--KPVLLTKTGRTAAGAEA 268 Query: 254 MGHAGAVISGGKGGAEDKINAMKEA-GICIAPSPARI 289 A ++G + A+ EA G+ I P + Sbjct: 269 ARSHTASLAGN----YRALEALCEATGVTIVDDPDGM 301 >gi|254254733|ref|ZP_04948050.1| Acyl-CoA synthetase (NDP forming) [Burkholderia dolosa AUO158] gi|124899378|gb|EAY71221.1| Acyl-CoA synthetase (NDP forming) [Burkholderia dolosa AUO158] Length = 819 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 99/289 (34%), Gaps = 31/289 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + +AG+ G + P G+ VP V + Sbjct: 43 VAVVGASSRAGSIGAMVWSRVLDGAFDGPVWPVNPKYRELNGHTVVP---DVDRLPAAPS 99 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS---SRLIGP 127 +V+ P+ + + E + V + + D + L+ + R++GP Sbjct: 100 --VAVVCTRPATWAGIVRKLGELGTRVAVIVGDARTESDRAALDRALKAAKPFVLRIVGP 157 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G+LTP P R G V +S+S LT + GLG S V +G + Sbjct: 158 GSLGVLTPARRAHFGAPAYTVRPGGVAWVSQSNALTNAVLGWADARGLGFSHVVALGSEA 217 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + DVL+ +D T +I++ + + A +F+ R KP++ G+T Sbjct: 218 --DVDAGDVLDYLASDPGTRAILLELDTVSA----ARKFMSAARAAARNKPVLALRTGRT 271 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 P A + AG+ + + + L Sbjct: 272 DPGD-----------------ALYTAAFQRAGMVRVDALDDLLDEIETL 303 >gi|167948589|ref|ZP_02535663.1| succinyl-CoA synthetase, alpha subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] gi|110589290|gb|ABG77154.1| succinyl-CoA synthetase alpha subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 144 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 60/107 (56%), Positives = 76/107 (71%), Gaps = 4/107 (3%) Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 DP+ GT FID LELF DE TE I+MVGEI GSAEEEAA+++K KP+V ++AG Sbjct: 1 DPINGTSFIDCLELFEKDEQTEGIIMVGEIAGSAEEEAAEYIKAHVS----KPVVAYIAG 56 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 TAPPG+ MGHAGA+ISGGKG A K A++ AG + SP+ G++ Sbjct: 57 VTAPPGKRMGHAGAIISGGKGTANAKFEALEAAGAHVVRSPSGDGQT 103 >gi|153828761|ref|ZP_01981428.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|148875808|gb|EDL73943.1| conserved hypothetical protein [Vibrio cholerae 623-39] Length = 893 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 41/300 (13%), Positives = 103/300 (34%), Gaps = 35/300 (11%) Query: 22 TFHTEQAIL-YCQTQVVGGIHPKKGSTYW-------TGGNVNVPV---FTTVAEAKERTA 70 H Q + + + P + +PV + V Sbjct: 1 MDHLNQLLRPKSVVVIGASVRPFRAGNIVMKNLLQGGFDGAIMPVTPYYPAVCGVLAYKT 60 Query: 71 -------ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARL 117 + +++ S + E + ++ ++ + + Sbjct: 61 ISDLPIVPDIAILCTHASRNVSLFKQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMMIA 120 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + + R++GPN G++ P G KG++ +S+S + + + +G+G Sbjct: 121 KSVNMRILGPNSLGLILPWMQFNGSFSPVSALKGNIAFVSQSAAVCTTILDWANDKGIGF 180 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S + +G +F D+L+ D+ T++I++ + +A +F+ R + Sbjct: 181 SAFISLGNA--SDIDFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNR 234 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 I+ G+T + A + +GG + +A++ G+ + + ++ L Sbjct: 235 RILVLKGGRT----KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|114762750|ref|ZP_01442184.1| CoA-binding protein [Pelagibaca bermudensis HTCC2601] gi|114544660|gb|EAU47666.1| CoA-binding protein [Roseovarius sp. HTCC2601] Length = 706 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 91/282 (32%), Gaps = 26/282 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+ G + + ++PK+ +P + +V + E A ++I Sbjct: 26 GRIGGRPIAAMLKAGYEGRILPVNPKR------DTVQGLPCYASVGDLPEAPEA--ALIA 77 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPG 131 VP I + G + A K RL+GPN G Sbjct: 78 VPAKLVPQTIEALGRKGCKAATLFSAGFAETGAEGEAAQRELVALAGKHGMRLLGPNTLG 137 Query: 132 ILTPDSCKIGIMPGS----IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + D G S R G++GI S+SG +GLG S + G + Sbjct: 138 VYNVDIGYYGTFSSSLDTGFPRPGNIGIASQSGAFGAHLGALARDQGLGCSVLITTGNEA 197 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 D + ++ + I E A A + R KP++ +G++ Sbjct: 198 --DITVADAIRWMAESDSIDVICTYMEAVNDAPALLAAL---DVARAAGKPVLALKSGRS 252 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 A R A ++G A+ + + G I P + Sbjct: 253 AVGARAAASHTASLTGDAVVADAV---LTDHGAIILRDPESM 291 >gi|295097885|emb|CBK86975.1| Acyl-CoA synthetase (NDP forming) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 887 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 98/278 (35%), Gaps = 23/278 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +AG + V + P + G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVMPVTP---AYKAVQGVLAWPDVQSLPFV-----PDLAVLCT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 + + + + ++ P + A + R++GPN G+L P Sbjct: 78 HAKRNLELLESLGQKGCKTCIILSS--PPEQQPELLACASRYQMRILGPNSLGLLAPWQG 135 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 RKG + +S+S ++ + Q +G S + +G + ++L+ Sbjct: 136 LNASFSPVPIRKGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELLD 193 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E +A +F+ R KPI+ +G++ P + + H+ Sbjct: 194 FLARDSKTSAILLYLEHLS----DARRFVSASRSASRNKPILVIKSGRS-PAAQRLLHSR 248 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + A++ AG+ + ++ L Sbjct: 249 SGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|260598965|ref|YP_003211536.1| hypothetical protein CTU_31730 [Cronobacter turicensis z3032] gi|260218142|emb|CBA32955.1| Uncharacterized protein yfiQ [Cronobacter turicensis z3032] Length = 887 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 98/279 (35%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + + V + P K G + P VA + +V+ Sbjct: 27 RAGFLMMRNLLAGGFSGPVLPVTPAWKA----VCGVLAWP---DVASLP--FTPDLAVLC 77 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + E + ++ P + A + RL+GPN G+L P Sbjct: 78 TNAKRNLTLLEALGEKGCKTCLVLSS--PPEQHAELLACAARFQMRLLGPNSLGLLAPWQ 135 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 RKG + +S+S ++ + Q LG S + +G + ++L Sbjct: 136 GLNASFSPVPIRKGKLAFISQSAAVSNTILDWAQQRQLGFSWFIALGDSLDIDVD--ELL 193 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P R + + Sbjct: 194 DYLARDSKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRS-PSARRLLNT 248 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G A D A++ AG+ + ++ L Sbjct: 249 ----HAGLDAAWD--AAIQRAGLLRVQDTHELFSAVETL 281 >gi|229523066|ref|ZP_04412478.1| protein acetyltransferase [Vibrio cholerae TM 11079-80] gi|229339916|gb|EEO04926.1| protein acetyltransferase [Vibrio cholerae TM 11079-80] Length = 893 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 102/286 (35%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q V +P ++P+ +A + N S+ Sbjct: 26 GNIVMKNLLQGGFDGAIVPVTPYYPAVCGVLAYKTISDLPIVPDIAILCTHASRNVSLF- 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 + E + ++ ++ + + + + R++GPN G Sbjct: 85 ----------KQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMTIAKSVNMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWMQFNGSFSPVSALKGNIAFVSQSAAVCTTILDWANDKGIGFSAFISLGNA--SDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D+ T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|323529124|ref|YP_004231276.1| GCN5-like N-acetyltransferase [Burkholderia sp. CCGE1001] gi|323386126|gb|ADX58216.1| GCN5-related N-acetyltransferase [Burkholderia sp. CCGE1001] Length = 808 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 60/318 (18%), Positives = 108/318 (33%), Gaps = 55/318 (17%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPK---KGSTYWTGGNVNVPVFTTVAEAKERTAANAS 74 G G + + + ++PK G ++P TVA Sbjct: 25 GSTGAMVWARVLEGGFDGPLWPVNPKYDTLGGHAVIHDAGDLPQAPTVA----------- 73 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL---EKSSSRLIGPNCPG 131 +I PP+ I + + + E D + ++ L + R++GP G Sbjct: 74 LICTPPASWPSIIRKLGGLGTRAAIIVGEVRSDDDRLALRHALSAARPNLLRIVGPGSLG 133 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 +++P P + G V +S+S LT + GLG S AV +G + Sbjct: 134 VVSPTLRAHLGAPSCTVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVALGDEA--DV 191 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP-- 249 + DVL+ +D T +I++ + + A +F+ R KP++ +G+ P Sbjct: 192 DAGDVLDYLASDPGTRAILLELDSVRA----ARKFMSAARAAARNKPVLALRSGRADPAD 247 Query: 250 ------------------------------PGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 G +I+ +G A +A AG Sbjct: 248 ALYTAAFRRAGLVRVDALDDLLDEIETLGVGRVAAGATATLITSDRGLATLACDAFAAAG 307 Query: 280 ICIAPSPARIGRSLVELL 297 +AP P +L + L Sbjct: 308 GTLAPWPDEASEALRQAL 325 >gi|254473547|ref|ZP_05086943.1| N-acetyltransferase [Pseudovibrio sp. JE062] gi|211957259|gb|EEA92463.1| N-acetyltransferase [Pseudovibrio sp. JE062] Length = 905 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 93/239 (38%), Gaps = 15/239 (6%) Query: 59 FTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 F VA E + A+ +++ + A + I + E +V G + A L Sbjct: 57 FKGVASIAEVESKADLAILLGDHTTAAEDIKQLGEQGTRAVVIPASGFDSWRDEHLDALL 116 Query: 118 EKS---SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + + + R++GP GI +P S ++ KG + ++SRSGT+ + Sbjct: 117 KAAHPFNIRILGPGSLGIASPHSKLSTLLTSEQALKGELALISRSGTIFNTTLAWAKANS 176 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G S V +G + D+L+ + D T++I++ E + +F+ Sbjct: 177 IGFSGVVSLGRR--LDVDVSDLLDWYAQDYRTKAILVHLETIANP----RKFMSAARAAA 230 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRS 292 R KP++ +G R +G S + A++ AG+ + + Sbjct: 231 RSKPVIVIRSG----ASRDQHISGTAHSSRLATRDSVYDAALQRAGVLRVYDLDEMFEA 285 >gi|296104257|ref|YP_003614403.1| GCN5-related N-acetyltransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058716|gb|ADF63454.1| GCN5-related N-acetyltransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 887 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 100/278 (35%), Gaps = 23/278 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +AG + V + P + G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVMPVTP---AYKAVQGVLAWPDVQSLPFV-----PDLAVLCT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 + + + + ++ P + A + R++GPN G+L P Sbjct: 78 NAKRNPELLESLGKKGCKTCIILSS--PPEQQPELLACASRYQMRILGPNSLGLLAPWQG 135 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 RKG + +S+S ++ + Q +G S + +G + ++L+ Sbjct: 136 LNASFSPVPIRKGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELLD 193 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E +A +F+ R KPI+ +G++ P +++ H+ Sbjct: 194 FLARDSKTSAILLYLEHLS----DARRFVSASRSASRNKPILVIKSGRS-PAAQSLLHS- 247 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 SG + A++ AG+ + ++ L Sbjct: 248 --HSGMDPAWD---AAIQRAGLLRVQDTHELFSAVETL 280 >gi|163841148|ref|YP_001625553.1| acetyl-CoA synthetase [Renibacterium salmoninarum ATCC 33209] gi|162954624|gb|ABY24139.1| acetyltransferase (GNAT) family protein [Renibacterium salmoninarum ATCC 33209] Length = 813 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 83/245 (33%), Gaps = 26/245 (10%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVR 112 + +++ T + ++I V + E A + ++ T G Sbjct: 257 YPSISAI--ETTIDLAIIAVSYEQVPGVVRECAAAGVKGVLIATGGFADEGDLGLSVQRE 314 Query: 113 VKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 + RLIGP G++ P + + ++GS+G+ S+S L Sbjct: 315 LVREARSGGMRLIGPASLGLVNTRPRVSLNASLAPQLPKRGSLGLFSQSAALGAALYASC 374 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 ++ GLG S+ G D+++ + D T M E G+ +F + Sbjct: 375 AKRGLGMSSIFSAGNRA--DVSGNDLMQYWEDDADTAVCGMYLESIGNP----RKFSRLA 428 Query: 231 AKRGRKKPIVGFVA---GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 + R KP++ + G P G + A ++++G+ + Sbjct: 429 RRLSRTKPVIVAKSDALGLQLPAGHAVRTTQAPAGALD-------AMLRQSGVIRVTTID 481 Query: 288 RIGRS 292 + Sbjct: 482 ELADV 486 >gi|161502246|ref|YP_001569358.1| hypothetical protein SARI_00274 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863593|gb|ABX20216.1| hypothetical protein SARI_00274 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 886 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 96/279 (34%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +++ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVMAWPDIASLP-----FTPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + + ++ P + A + RL+GPN G+L P Sbjct: 77 TNASRNLALLDALGANGCKTCIILSA--PTSQHEELLACARRHKMRLLGPNSLGLLAPWL 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 SAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|312114586|ref|YP_004012182.1| CoA-binding protein [Rhodomicrobium vannielii ATCC 17100] gi|311219715|gb|ADP71083.1| CoA-binding domain protein [Rhodomicrobium vannielii ATCC 17100] Length = 887 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 85/239 (35%), Gaps = 16/239 (6%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 + TVA+ +VI P I + + + + + D + A Sbjct: 60 YKTVADLP--LCPELAVICTPGPAVPGVIEDLGKRGTRAAIVAAD---MSDPDALLAAAR 114 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + RL+G G+ P + G V +S+SG L A+ G+G S Sbjct: 115 RYDLRLLGGASLGVCVPKANLYANFAHMQAHPGRVAFVSQSGALCAAALDWAKPRGIGFS 174 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 V +G +F D+++ DE T++I++ E E F+ R KP Sbjct: 175 CVVSLG--DAVEIDFADMMDYLSKDEETKAILLHIETI----RERRGFVSAARAAARNKP 228 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARIGRSLVEL 296 ++ G + T G +S + +A ++ AG S + ++ L Sbjct: 229 VLILKGGNRS----TNHPIGQFLSETLASPDGAFDATVRRAGALRVYSIDELFSAVETL 283 >gi|121610426|ref|YP_998233.1| CoA-binding domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121555066|gb|ABM59215.1| CoA-binding domain protein [Verminephrobacter eiseniae EF01-2] Length = 711 Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 87/250 (34%), Gaps = 21/250 (8%) Query: 51 GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV--- 107 + +P + T+ + + +++ VP AI + +E E+ +CIT G Sbjct: 65 TELMGLPAYRTLPDCPAA--VDLAILLVPREHVYAAIEDCVEKEVGCALCITAGFAETGP 122 Query: 108 ---LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG-----SIFRKGSVGILSRS 159 D + A RLIGPNC G++ G +G+ S+S Sbjct: 123 KGCADEQALVALARAGGVRLIGPNCMGLMNTHHRLCATTAVVMGGIDTLPAGGIGLASQS 182 Query: 160 GTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSA 219 G L + + G G S+ + +G + D E + D T+ + + E A Sbjct: 183 GALMGAMISRGVDIGTGFSSTISVGNQ--SDLDLNDFFEYLIDDPMTDVVCLYMEAVKDA 240 Query: 220 EEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 +KP+ +G++ R A ++G E + G Sbjct: 241 ---PRFTALLARAAAVRKPVCIVKSGRSEAGARAAASHTASLAGAWPAFE---AICRRWG 294 Query: 280 ICIAPSPARI 289 + + + + Sbjct: 295 VYLFETIYDL 304 >gi|271967931|ref|YP_003342127.1| succinyl-CoA synthetase subunit alpha [Streptosporangium roseum DSM 43021] gi|270511106|gb|ACZ89384.1| putative enzyme, putative succinyl-CoA synthetase, alpha subunit [Streptosporangium roseum DSM 43021] Length = 492 Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 59/253 (23%), Positives = 102/253 (40%), Gaps = 19/253 (7%) Query: 43 KKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCIT 102 G P TV A AA +++ VP A +++IEA + ++ + Sbjct: 88 GLAGRTGGGTAAEHPP-RTVRTAARGRAATLALVSVPGEHAFAEAMDAIEAGLS-VMIFS 145 Query: 103 EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTL 162 + +PV V +K R + ++GP+C + + G+ ++ R G VG+++ SGT Sbjct: 146 DNVPVEQEVLLKRRAGERGVLVMGPDCGTAVIAGA---GLGFANVLRPGPVGLVAASGTG 202 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGS 218 + Q G+G S +G+GG V G + LE AD ATE IV+V + Sbjct: 203 AQQVSCLLDQAGVGVSHVLGVGGRDLSEEVGGLSTLRALEALDADPATELIVLVSKPPAP 262 Query: 219 AEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEA 278 E A+ +++ + + + P + A G A + A + Sbjct: 263 ---EVARTVREAVAKLGTPVVTALLG----PGQDDLTAAAGSALRALGVA---VPAWRSW 312 Query: 279 GICIAPSPARIGR 291 + PSP R Sbjct: 313 PAPVPPSPGDRPR 325 >gi|327485604|gb|AEA80010.1| Protein acetyltransferase [Vibrio cholerae LMA3894-4] Length = 864 Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 102/286 (35%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q V +P ++P+ +A + N S+ Sbjct: 26 GNIVMKNLLQGGFDGAIMPVTPYYPAVCGVLAYKTISDLPIVPDIAILCTHASRNVSLF- 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 + E + ++ ++ + + + + R++GPN G Sbjct: 85 ----------KQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMTIAKSVNMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWMQFNGSFSPVSALKGNIAFVSQSAAVCTTILDWANDKGIGFSAFISLGNA--SDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D+ T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|238912716|ref|ZP_04656553.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 886 Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 95/279 (34%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +++ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVMAWPDIASLP-----FTPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + + ++ P + A RL+GPN G+L P Sbjct: 77 TNASRNLALLDALGAKGCKTCIILSA--PTSQHEELLACARHYKMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 SAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|207858005|ref|YP_002244656.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206709808|emb|CAR34160.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 886 Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 95/279 (34%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +++ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVMAWPDIASLP-----FTPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + + ++ P + A RL+GPN G+L P Sbjct: 77 TNASRNLALLDALGAKGCKTCIILSA--PTSQHEELLACARHYKMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 SAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|205353694|ref|YP_002227495.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273475|emb|CAR38452.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628799|gb|EGE35142.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 886 Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 95/279 (34%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +++ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVMAWPDIASLP-----FTPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + + ++ P + A RL+GPN G+L P Sbjct: 77 TNASRNLALLDALGAKGCKTCIILSA--PTSQHEELLACARHYKMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 SAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|200387306|ref|ZP_03213918.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199604404|gb|EDZ02949.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 886 Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 95/279 (34%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +++ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVMAWPDIASLP-----FTPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + + ++ P + A RL+GPN G+L P Sbjct: 77 TNASRNLALLDALGAKGCKTCIILSA--PTSQHEELLACARHYKMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 SAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|168262179|ref|ZP_02684152.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205349001|gb|EDZ35632.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 886 Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 95/279 (34%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +++ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVMAWPDIASLP-----FTPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + + ++ P + A RL+GPN G+L P Sbjct: 77 TNASRNLALLDALGAKGCKTCIILSA--PTSQHEELLACARHYKMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 SAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|197251689|ref|YP_002147555.1| CoA binding domain/acetyltransferase domain-containing protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197215392|gb|ACH52789.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 886 Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 95/279 (34%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +++ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVMAWPDIASLP-----FTPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + + ++ P + A RL+GPN G+L P Sbjct: 77 TNASRNLALLDALGAKGCKTCIILSA--PTSQHEELLACARHYKMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 SAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|168232179|ref|ZP_02657237.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194468756|ref|ZP_03074740.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194455120|gb|EDX43959.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333679|gb|EDZ20443.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 886 Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 95/279 (34%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +++ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVMAWPDIASLP-----FTPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + + ++ P + A RL+GPN G+L P Sbjct: 77 TNASRNLALLDALGAKGCKTCIILSA--PTSQHEELLACARHYKMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 SAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|197263395|ref|ZP_03163469.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198241823|ref|YP_002216666.1| CoA-binding domain/acetyltransferase domain-containing protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197241650|gb|EDY24270.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197936339|gb|ACH73672.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326624422|gb|EGE30767.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 886 Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 95/279 (34%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +++ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVMAWPDIASLP-----FTPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + + ++ P + A RL+GPN G+L P Sbjct: 77 TNASRNLALLDALGAKGCKTCIILSA--PTSQHEELLACARHYKMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 SAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|62181226|ref|YP_217643.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128859|gb|AAX66562.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715714|gb|EFZ07285.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 886 Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 95/279 (34%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +++ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVMAWPDIASLP-----FTPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + + ++ P + A RL+GPN G+L P Sbjct: 77 TNASRNLALLDALGAKGCKTCIILSA--PTSQHEELLACARHYKMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 SAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|56412526|ref|YP_149601.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194442623|ref|YP_002041918.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197361461|ref|YP_002141097.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56126783|gb|AAV76289.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194401286|gb|ACF61508.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197092937|emb|CAR58366.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 886 Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 95/279 (34%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +++ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVMAWPDIASLP-----FTPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + + ++ P + A RL+GPN G+L P Sbjct: 77 TNASRNLALLDALGAKGCKTCIILSA--PTSQHEELLACARHYKMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 SAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|16765971|ref|NP_461586.1| acetyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161612629|ref|YP_001586594.1| hypothetical protein SPAB_00324 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168245085|ref|ZP_02670017.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168468065|ref|ZP_02701902.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194449788|ref|YP_002046660.1| CoA binding domain/acetyltransferase domain-containing protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|16421201|gb|AAL21545.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161361993|gb|ABX65761.1| hypothetical protein SPAB_00324 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194408092|gb|ACF68311.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195628872|gb|EDX48286.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205336131|gb|EDZ22895.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|261247849|emb|CBG25678.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994792|gb|ACY89677.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159202|emb|CBW18717.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913645|dbj|BAJ37619.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226006|gb|EFX51059.1| Protein acetyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130989|gb|ADX18419.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989580|gb|AEF08563.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 886 Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 95/279 (34%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +++ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVMAWPDIASLP-----FTPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + + ++ P + A RL+GPN G+L P Sbjct: 77 TNASRNLALLDALGAKGCKTCIILSA--PTSQHEELLACARHYKMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 SAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|262164170|ref|ZP_06031908.1| protein acetyltransferase [Vibrio mimicus VM223] gi|262026550|gb|EEY45217.1| protein acetyltransferase [Vibrio mimicus VM223] Length = 893 Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 102/286 (35%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q V +P ++P+ +A + N S+ Sbjct: 26 GNIVMKNLLQGGFDGAIMPVTPYYPAVCGVLAYKTIADLPIIPDIAILCTHASRNVSLF- 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 + E + ++ ++ + + A + + R++GPN G Sbjct: 85 ----------NQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMAIAKPAGMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWIHFNGSFSPVSALKGNIAFISQSAAVCTTILDWANDKGIGFSAFISLGNA--SDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ + T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTHKHTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|291618558|ref|YP_003521300.1| YfiQ [Pantoea ananatis LMG 20103] gi|291153588|gb|ADD78172.1| YfiQ [Pantoea ananatis LMG 20103] Length = 895 Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 99/279 (35%), Gaps = 23/279 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AG F + + V + PK G + P ++ A + +VI Sbjct: 29 GRAGYFMMRNLLAGGFSGPVLPVTPK---YKAVSGVLAWPDIHSLP-----FAPDLAVIC 80 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + E + ++ P + +KA + RL+GPN G+L P Sbjct: 81 THHKRNLGLLQQLGEKGCKACIILSA--PASQLAELKACASRWQIRLLGPNSLGLLAPWQ 138 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 KG + +S+S ++ + Q LG S + +G + + L Sbjct: 139 GLNASFSPVPIAKGRIAFISQSSAVSNTILDWAQQRNLGFSWFIALGDSLDTDVDDL--L 196 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G+ A Sbjct: 197 DFLARDGKTSAILLYLEHLS----DARRFVSASRSASRNKPILIIKSGR-------SRQA 245 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A++ G A++ AG+ + ++ L Sbjct: 246 QALLGTHSGLDAAWDAAIQRAGLLRVQDTHELFTAVESL 284 >gi|327394938|dbj|BAK12360.1| acetyl-CoA synthetase YfiQ [Pantoea ananatis AJ13355] Length = 895 Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 99/279 (35%), Gaps = 23/279 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AG F + + V + PK G + P ++ A + +VI Sbjct: 29 GRAGYFMMRNLLAGGFSGPVLPVTPK---YKAVSGVLAWPDIHSLP-----FAPDLAVIC 80 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + E + ++ P + +KA + RL+GPN G+L P Sbjct: 81 THHKRNLGLLQQLGEKGCKACIILSA--PASQLAELKACASRWQIRLLGPNSLGLLAPWQ 138 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 KG + +S+S ++ + Q LG S + +G + + L Sbjct: 139 GLNASFSPVPIAKGRIAFISQSSAVSNTILDWAQQRNLGFSWFIALGDSLDTDVDDL--L 196 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G+ A Sbjct: 197 DFLARDGKTSAILLYLEHLS----DARRFVSASRSASRNKPILIIKSGR-------SRQA 245 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A++ G A++ AG+ + ++ L Sbjct: 246 QALLGTHSGLDAAWDAAIQRAGLLRVQDTHELFTAVESL 284 >gi|229513246|ref|ZP_04402711.1| protein acetyltransferase [Vibrio cholerae TMA 21] gi|229349656|gb|EEO14611.1| protein acetyltransferase [Vibrio cholerae TMA 21] Length = 893 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 102/286 (35%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q V +P ++P+ +A + N S+ Sbjct: 26 GNIVMKNLLQGGFDGAIMPVTPYYPAVCGVLAYKTISDLPIVPDIAILCTHASRNVSLF- 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 + E + ++ ++ + + + + R++GPN G Sbjct: 85 ----------KQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMTIAKSVNMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWMQFNGSFSPVSALKGNIAFVSQSAAVCTTILDWANDKGIGFSAFISLGNA--SDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D+ T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|262158760|ref|ZP_06029873.1| protein acetyltransferase [Vibrio cholerae INDRE 91/1] gi|262029333|gb|EEY47984.1| protein acetyltransferase [Vibrio cholerae INDRE 91/1] Length = 886 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 102/286 (35%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q V +P ++P+ +A + N S+ Sbjct: 26 GNIVMKNLLQGGFDGAIMPVTPYYPAVCGVLAYKTISDLPIVPDIAILCTHASRNVSLF- 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 + E + ++ ++ + + + + R++GPN G Sbjct: 85 ----------KQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMTIAKSVNMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWMQFNGSFSPVSALKGNIAFVSQSAAVCTTILDWANDKGIGFSAFISLGNA--SDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D+ T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|229526884|ref|ZP_04416288.1| protein acetyltransferase [Vibrio cholerae bv. albensis VL426] gi|229337042|gb|EEO02060.1| protein acetyltransferase [Vibrio cholerae bv. albensis VL426] Length = 893 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 102/286 (35%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q V +P ++P+ +A + N S+ Sbjct: 26 GNIVMKNLLQGGFDGAIMPVTPYYPAVCGVLAYKTISDLPIVPDIAILCTHASRNVSLF- 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 + E + ++ ++ + + + + R++GPN G Sbjct: 85 ----------KQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMTIAKSVNMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWMQFNGSFSPVSALKGNIAFVSQSAAVCTTILDWANDKGIGFSAFISLGNA--SDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D+ T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|254226468|ref|ZP_04920054.1| conserved hypothetical protein [Vibrio cholerae V51] gi|125621030|gb|EAZ49378.1| conserved hypothetical protein [Vibrio cholerae V51] Length = 893 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 102/286 (35%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q V +P ++P+ +A + N S+ Sbjct: 26 GNIVMKNLLQGGFDGAIMPVTPYYPAVCGVLAYKTISDLPIVPDIAILCTHASRNVSLF- 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 + E + ++ ++ + + + + R++GPN G Sbjct: 85 ----------KQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMTIAKSVNMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWMQFNGSFSPVSALKGNIAFVSQSAAVCTTILDWANDKGIGFSAFISLGNA--SDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D+ T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|15601333|ref|NP_232964.1| hypothetical protein VCA0574 [Vibrio cholerae O1 biovar eltor str. N16961] gi|121725927|ref|ZP_01679227.1| conserved hypothetical protein [Vibrio cholerae V52] gi|153817953|ref|ZP_01970620.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|153823287|ref|ZP_01975954.1| conserved hypothetical protein [Vibrio cholerae B33] gi|227812142|ref|YP_002812152.1| hypothetical protein VCM66_A0533 [Vibrio cholerae M66-2] gi|229506256|ref|ZP_04395765.1| protein acetyltransferase [Vibrio cholerae BX 330286] gi|229509885|ref|ZP_04399365.1| protein acetyltransferase [Vibrio cholerae B33] gi|229516554|ref|ZP_04406001.1| protein acetyltransferase [Vibrio cholerae RC9] gi|229605796|ref|YP_002876500.1| protein acetyltransferase [Vibrio cholerae MJ-1236] gi|254849734|ref|ZP_05239084.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255746649|ref|ZP_05420596.1| protein acetyltransferase [Vibrio cholera CIRS 101] gi|298499386|ref|ZP_07009192.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9657984|gb|AAF96476.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121631692|gb|EAX64060.1| conserved hypothetical protein [Vibrio cholerae V52] gi|126511491|gb|EAZ74085.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126519212|gb|EAZ76435.1| conserved hypothetical protein [Vibrio cholerae B33] gi|227011284|gb|ACP07495.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|229346435|gb|EEO11406.1| protein acetyltransferase [Vibrio cholerae RC9] gi|229352330|gb|EEO17270.1| protein acetyltransferase [Vibrio cholerae B33] gi|229356607|gb|EEO21525.1| protein acetyltransferase [Vibrio cholerae BX 330286] gi|229372282|gb|ACQ62704.1| protein acetyltransferase [Vibrio cholerae MJ-1236] gi|254845439|gb|EET23853.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255736403|gb|EET91801.1| protein acetyltransferase [Vibrio cholera CIRS 101] gi|297541367|gb|EFH77418.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 893 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 102/286 (35%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q V +P ++P+ +A + N S+ Sbjct: 26 GNIVMKNLLQGGFDGAIMPVTPYYPAVCGVLAYKTISDLPIVPDIAILCTHASRNVSLF- 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 + E + ++ ++ + + + + R++GPN G Sbjct: 85 ----------KQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMTIAKSVNMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWMQFNGSFSPVSALKGNIAFVSQSAAVCTTILDWANDKGIGFSAFISLGNA--SDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D+ T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|157382776|gb|ABV48825.1| ATP citrate lyase alpha subunit [Hydrogenimonas thermophila] Length = 325 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 6/117 (5%) Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 G+ FID L + + ++++GE+GG+ E + + +K KP++ + G Sbjct: 1 RFVGSVFIDNLLRMQDNPDVKYMILLGEVGGTEEYKVIEAVK---SGKITKPVIAWCIGT 57 Query: 247 TAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 A G GHAGA + + AE K AM+EAGI + S + + + E+ L Sbjct: 58 IAKHFSSGVQFGHAGASANAERETAEAKNKAMREAGIHVPESFNDLPKVINEVYTDL 114 >gi|302541484|ref|ZP_07293826.1| acetyl coenzyme A synthetase (ADP forming) [Streptomyces hygroscopicus ATCC 53653] gi|302459102|gb|EFL22195.1| acetyl coenzyme A synthetase (ADP forming) [Streptomyces himastatinicus ATCC 53653] Length = 716 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 98/276 (35%), Gaps = 21/276 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G I + ++PK + + +V + + +V Sbjct: 279 GKIGNSVMRNLIDGGFPGEIHPVNPK------ADDILGRKAYASVTDVP--GEVDVAVFA 330 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEKSSSRLIGPNCPGIL 133 +P A+ E IP V I G ++ A E+ RL+GPN G Sbjct: 331 IPAKFVPAALEEVGRKGIPNAVLIPSGFAETGEHELQDKIVAIAEEHGVRLLGPNIYGYY 390 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 + KG V + S+SG + + G S VG+G + Sbjct: 391 STWQDLCATFCTPYDVKGPVALTSQSGGIGMAILGFARTTKTGVSAIVGLGNK--SDVDE 448 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 D+L F D T+ I M E ++ F++ +KP+V AG+TA R Sbjct: 449 DDLLTWFGEDPNTQCIAMHLEDL----KDGRAFVEAARATVPRKPVVVLKAGRTAAGARA 504 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G ++G +D +++AG+ AP + Sbjct: 505 AGSHTGALAGDDAVYDD---ILRQAGVIRAPGLNEM 537 >gi|239982767|ref|ZP_04705291.1| acyl-CoA synthetase (NDP forming type) [Streptomyces albus J1074] gi|291454614|ref|ZP_06594004.1| acyl-CoA synthetase [Streptomyces albus J1074] gi|291357563|gb|EFE84465.1| acyl-CoA synthetase [Streptomyces albus J1074] Length = 653 Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 95/272 (34%), Gaps = 30/272 (11%) Query: 36 VVGGIHPKKGSTYWTGGNVN-VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE 94 G +H TG V V +V + E + +VI VP +A+ E E Sbjct: 240 FTGPVHAVNQGFPDTGDTVEGVRAHRSVRDIAE--PVDLAVIAVPAERVPEAVAECGEHG 297 Query: 95 IPLIVCITEGIPVL------DMVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGS 146 + +V I+ G + + R+IGPN G++ P++ + Sbjct: 298 VQGLVVISAGYAEQGPEGRERQRALIRQARSYGMRVIGPNAFGVINTTPETRLNASLAPE 357 Query: 147 IFRKGSVGILSRSGTLTYEAVFQTSQEG---------LGQSTAVGIGGDPVKGTEFIDVL 197 + G VG+ ++SG + + ++G G ST V G DV+ Sbjct: 358 LPVPGRVGLFTQSGAIGIALLSALHRDGGGADGVPNPTGVSTFVSAGNRA--DVSGNDVM 415 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + + D T+ +M E G+ +F + + KP+V + GH Sbjct: 416 QYWYDDPHTDVALMYLETIGNP----RKFTRLARRTAAAKPLVVVQGARH-SGITPTGHP 470 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 V +++AG+ + + Sbjct: 471 APVTRLPYATVSAL---LRQAGVIRVDTVTEL 499 >gi|268590435|ref|ZP_06124656.1| acetyltransferase, GNAT family [Providencia rettgeri DSM 1131] gi|291314350|gb|EFE54803.1| acetyltransferase, GNAT family [Providencia rettgeri DSM 1131] Length = 881 Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 104/278 (37%), Gaps = 23/278 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +AG+ + + + ++P + + V + ++ + + + +VI Sbjct: 27 RAGSVMMKNLLTSGFKGPILPVNPNRN------SVLGVLAYPSIDKLPLKP--DLAVICT 78 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 S + + EA +++ ++ P + +K ++ RL+GPN G L P Sbjct: 79 HYSRNISCLQQLGEAGCKVVIILSS--PSIQFNELKKVAQQYQIRLLGPNSLGFLAPWQG 136 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 KG + +S+S ++ + +G S + +G + + L+ Sbjct: 137 LNASFSPIPILKGKLAFISQSAAVSNTVLDWARHRDIGFSYFIALGDSIDIDIDDL--LD 194 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E +A +FL R KPI+ +G+T + +G Sbjct: 195 YLARDSKTSAILLYLESIS----DARRFLSSSRSASRNKPILVIKSGRTRKAQKLLGDKP 250 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++ + A++ AG+ + ++ L Sbjct: 251 SLDA-------AYDAAIQRAGLLRVQDTHEMFSAVETL 281 >gi|118575373|ref|YP_875116.1| acyl-CoA synthetase (NDP forming) [Cenarchaeum symbiosum A] gi|118193894|gb|ABK76812.1| acyl-CoA synthetase (NDP forming) [Cenarchaeum symbiosum A] Length = 688 Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 68/314 (21%), Positives = 119/314 (37%), Gaps = 38/314 (12%) Query: 1 MSILVDKNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVP 57 M T LV G + GK G + + + V ++P K + Sbjct: 233 MESFFTPKTVALV-GASSSKGKIGNSILDSLVNHDFKGKVYPVNP-KAKKIFGKK----- 285 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MV 111 + +V+ + + +I V S + E I +V ++ G L Sbjct: 286 CYPSVSALPGK--IDLVIISVDLSVIPPVLEECAAKGIHNVVIVSGGGKELGGKRASYEA 343 Query: 112 RVKARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 +V+ +K R+IGPNC G+ D G + G V +LS+SGT+ Sbjct: 344 KVRRLSKKHGIRIIGPNCIGMFNAANRLDCAFQGQARMVRAKLGPVALLSQSGTMG--IS 401 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 F + + G S V G + D++ D T+ I + E G + +F+ Sbjct: 402 FLETADTFGLSKMVSYGNR--SDVDEADMIWYLAGDPQTKVIALYVEGFG----DGRKFI 455 Query: 228 KDEAKRGRKK--PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAP 284 K K ++K P++ + +G+T + A +G GG+ I A K+AGI Sbjct: 456 KTAKKVMKEKKKPVIVWKSGRTEMGAKQ----AASHTGSLGGSNAIIMGAFKQAGIISVD 511 Query: 285 SPARIGRSLVELLG 298 S + ++ + L Sbjct: 512 SYQELA-AVSKALA 524 >gi|323097753|emb|CBJ18438.1| ATP citrate lyase [uncultured bacterium] Length = 256 Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 6/124 (4%) Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + IGGD G+ FID L A+ + ++++GE+GG+ E + + +KD KKPI Sbjct: 1 CIAIGGDRFVGSVFIDNLLRMEANPEVKYMILLGEVGGTEEYKVIEAVKDGRI---KKPI 57 Query: 240 VGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + G A G GHAGA + AE K AM EAGI + S + + ++ Sbjct: 58 IAWCIGTIAKYYDSGVQFGHAGASANADSETAEYKNRAMAEAGIHVPTSFNELPAMINKV 117 Query: 297 LGSL 300 L Sbjct: 118 FTDL 121 >gi|153214557|ref|ZP_01949444.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124115255|gb|EAY34075.1| conserved hypothetical protein [Vibrio cholerae 1587] Length = 893 Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 102/286 (35%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q V +P ++P+ +A + N S+ Sbjct: 26 GNIVMKNLLQGGFDGAIMPVTPYYPAVCGVLAYKTISDLPIVPDIAILCTHASRNVSLF- 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 + E + ++ ++ + + + + R++GPN G Sbjct: 85 ----------KQLAEKGVRQVIVLSSDMYSLDAQGEEIQAQCMTIAKSVNMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWMQFNGSFSPVSALKGNIAFVSQSAAVCTTILDWANDKGIGFSAFISLGNA--SDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D+ T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|147672312|ref|YP_001215356.1| hypothetical protein VC0395_0517 [Vibrio cholerae O395] gi|262168427|ref|ZP_06036123.1| protein acetyltransferase [Vibrio cholerae RC27] gi|146314695|gb|ABQ19235.1| conserved hypothetical protein [Vibrio cholerae O395] gi|227015366|gb|ACP11575.1| conserved hypothetical protein [Vibrio cholerae O395] gi|262022956|gb|EEY41661.1| protein acetyltransferase [Vibrio cholerae RC27] Length = 893 Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 102/286 (35%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q V +P ++P+ +A + N S+ Sbjct: 26 GNIVMKNLLQGGFDGAIMPVTPYYPAVCGVLAYKTISDLPIVPDIAILCTHASRNVSLF- 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 + E + ++ ++ + + + + R++GPN G Sbjct: 85 ----------KQLAEKGVRQVIVLSSDMYSLDAQGEEIQAQCMTIAKSVNMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWMQFNGSFSPVSALKGNIAFVSQSAAVCTTILDWANDKGIGFSAFISLGNA--SDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D+ T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|213585712|ref|ZP_03367538.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 498 Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 95/279 (34%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +++ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVMAWPDIASLP-----FTPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + + ++ P + A RL+GPN G+L P Sbjct: 77 TNASRNLALLDALGAKGCKTCIILSA--PTSQHEELLASARHYKMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 SAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|168823160|ref|ZP_02835160.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205340539|gb|EDZ27303.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320085528|emb|CBY95307.1| Uncharacterized protein yfiQ [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 886 Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 95/279 (34%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +++ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVMAWPDIASLP-----FTPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + + ++ P + A RL+GPN G+L P Sbjct: 77 TNASRNLALLDALGAKGCKTCIILSA--PTSQHEELLASARHYKMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 SAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|16761509|ref|NP_457126.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29140794|ref|NP_804136.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213425260|ref|ZP_03358010.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|289825482|ref|ZP_06544689.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25512315|pir||AD0831 probable acyl-CoA synthetase STY2844 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503810|emb|CAD05835.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi] gi|29136418|gb|AAO67985.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 886 Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 95/279 (34%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +++ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVMAWPDIASLP-----FTPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + + ++ P + A RL+GPN G+L P Sbjct: 77 TNASRNLALLDALGAKGCKTCIILSA--PTSQHEELLASARHYKMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 SAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|261251189|ref|ZP_05943763.1| protein acetyltransferase [Vibrio orientalis CIP 102891] gi|260938062|gb|EEX94050.1| protein acetyltransferase [Vibrio orientalis CIP 102891] Length = 894 Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 94/265 (35%), Gaps = 24/265 (9%) Query: 46 STYWTGGNVNVPVFTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLI 98 + P +++V + + +++ + + ++ + Sbjct: 36 GGFEGAIMPVTPKYSSVCGVLAYPSVEQLPIIPDVAILCTHAKYNQALFQQLADKQVKSV 95 Query: 99 VCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 + ++ + ++S R++GPN G++ P KG Sbjct: 96 IVLSADMHLSNDDGESIQSACLQIAKQSGMRILGPNSLGLVLPWVNFNASFSPVTAEKGK 155 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 + +S+S + + + + +G S + +G +F D+L+ D TE+I++ Sbjct: 156 IAFISQSAAMCTTILDWANDKNIGFSAFISLGNA--LDIDFSDLLDHLSTDTHTEAILLY 213 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE-DK 271 + ++A +F+ R + I+ G+T+ A +GG + Sbjct: 214 VDTI----KDARRFMSAARAASRNRRILVLKGGRTSAG----RLAAKAHTGGDDTLDIIY 265 Query: 272 INAMKEAGICIAPSPARIGRSLVEL 296 +A++ G+ + + ++ L Sbjct: 266 DSAIRRTGMLRVNNSHELFAAVETL 290 >gi|167042749|gb|ABZ07469.1| putative CoA-binding domain protein [uncultured marine crenarchaeote HF4000_ANIW133O4] Length = 705 Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 60/309 (19%), Positives = 113/309 (36%), Gaps = 31/309 (10%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M + LV G + G + G ++P + + + Sbjct: 249 MEKFFTPESVALV-GASATPGKIGNSVLDALAKQDFKGKVYPINPKQE---SILGIKCYP 304 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL------DMVRVK 114 ++ +++ + V+ + + G + + I +V ++ G L VK Sbjct: 305 SLDAIEDK--IDLVVVCIDLAQCGPLMKTCAKKGIHNVVIVSGGGKELGGDRAAMEAEVK 362 Query: 115 ARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 K R++GPNC G+ D G R G+V S+SGT+ + Sbjct: 363 RLSLKHKIRVVGPNCIGMFNAANRLDCAFQGQARMVRARLGNVAFFSQSGTMGISMLE-- 420 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + + G S + G + D++ +D T+ I + E G + +F+ Sbjct: 421 TADSFGLSKMISYGNR--SDVDEADMISYAGSDPQTKVICLYVEGFG----DGRKFISAA 474 Query: 231 AK--RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPA 287 + + +KKPIV + +G++A + A +G GG+ I A K+AGI S Sbjct: 475 KRVMKEKKKPIVIWKSGRSAAGAKQ----AASHTGSLGGSNAIIMGAFKQAGIISVDSYQ 530 Query: 288 RIGRSLVEL 296 + L Sbjct: 531 ELAGVAKAL 539 >gi|258653918|ref|YP_003203074.1| GCN5-related N-acetyltransferase [Nakamurella multipartita DSM 44233] gi|258557143|gb|ACV80085.1| GCN5-related N-acetyltransferase [Nakamurella multipartita DSM 44233] Length = 893 Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 93/257 (36%), Gaps = 26/257 (10%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P V + TV + + + +V+ VP D + + Sbjct: 235 FGGPVYPVNPDAV---SVRGVRAYPTVNDIPD--PVDVAVVTVPTDTVADIVEACRVKGV 289 Query: 96 PLIVCITEGIP------VLDMVRVKARLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSI 147 +V +T G + A + + RL+GPNC G++ D + + Sbjct: 290 HGLVVMTGGFSDAGDDGAAAQRHMAAVVRGAGMRLLGPNCLGLINTDPAVRLNASLAPVV 349 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 G +G +SG L + + GLG ST V G D+L+ + D+ TE Sbjct: 350 PPPGRIGFFCQSGALGVAILADAAARGLGLSTFVSAGNRA--DVSGNDLLQYWHGDDRTE 407 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 +++ E G+ +F + R KP++ +G+ A + G Sbjct: 408 LVLLYLESFGNP----RKFARLARVLARTKPVIAVKSGRHA-------RTVVGLQGSALS 456 Query: 268 AEDKINAMKEAGICIAP 284 + +++G+ P Sbjct: 457 EDVVATLFEQSGVIRTP 473 >gi|168238346|ref|ZP_02663404.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735388|ref|YP_002115663.1| CoA binding domain/acetyltransferase domain-containing protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194710890|gb|ACF90111.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288830|gb|EDY28203.1| CoA binding domain/acetyltransferase domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 886 Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 95/279 (34%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +++ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVMAWPDIASLP-----FTPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + + ++ P + A RL+GPN G+L P Sbjct: 77 TNASRNLALLDALGAKGCKTCIILSA--PSSQHEELLACARHYKMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNT 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 248 SAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|323097751|emb|CBJ18437.1| ATP citrate lyase [uncultured bacterium] Length = 335 Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 6/124 (4%) Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + IGGD G+ FID L + + ++++GE+GG+ E + + +K KPI Sbjct: 1 CIAIGGDRFVGSVFIDNLLRMEKNPDVKYMILLGEVGGTEEYKVIEAVK---SGKITKPI 57 Query: 240 VGFVAGKTAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + G A G GHAGA +G AE K NAM EAGI + S + + ++ Sbjct: 58 IAWCIGTIAKYYDSGVQFGHAGASANGEMETAEYKNNAMAEAGIYVPTSFNELPAMINKV 117 Query: 297 LGSL 300 L Sbjct: 118 FTEL 121 >gi|260905178|ref|ZP_05913500.1| acid--CoA ligase [Brevibacterium linens BL2] Length = 704 Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 18/234 (7%) Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 P ++++AE E VI +P +G + +++ A + + I+ +P V R Sbjct: 53 PTYSSLAELPE--TPELLVISIPGNGVPAVVDDALAAGVRAFLIISARVP--GAAEVAQR 108 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 + + +RLIGP+ G++ + + + F GS+ ++++SG L E +++ GLG Sbjct: 109 IISAGARLIGPSSLGVVDASNDLL--LAWGNFTPGSLAVVTQSGQLGTEIATLSARSGLG 166 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE--IGGSAEEEAAQFLKDEAKRG 234 S IGG ++L + D AT +V+ E GGSA A Q L+ Sbjct: 167 ISRFASIGGQ--SDVRAAEILSSLVDDAATTQVVLYLESFTGGSALVSAMQALRAAG--- 221 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 KP + G++ R ++ + A + AG +P Sbjct: 222 --KPTMILTTGQSDAGARLARSHTGSLTSAMDTVD---AACRAAGAIRLSTPGE 270 >gi|293603297|ref|ZP_06685725.1| GNAT family acetyltransferase [Achromobacter piechaudii ATCC 43553] gi|292818207|gb|EFF77260.1| GNAT family acetyltransferase [Achromobacter piechaudii ATCC 43553] Length = 813 Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 94/264 (35%), Gaps = 34/264 (12%) Query: 44 KGSTYW----TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 K T G +P T+ + +++ V P+ + + A P V Sbjct: 34 KAKTTVVDCVEGAAPELP--ATLEGLAAGARPDLALVCVSPA-VLPETLRRLSALAPRAV 90 Query: 100 CITEG-----IPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 + P +A E++ L+GP G P + + R G V Sbjct: 91 ILLPHQLPDPYPRGTWALCRAWAEENRCELLGPRSFGAQRPHAGLNLSQHPVLARAGRVA 150 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 ++++S ++ + +G STAV +G + V G VL+ +D T+SIV+ E Sbjct: 151 LVAQSRSIMAAVMDWAEDVHIGFSTAVSLGDEAVVGL--AKVLDYLASDPRTDSIVLYLE 208 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 G A +F+ KP++ AG+ S A Sbjct: 209 DVGP----AREFMSALRAAASVKPVIVLKAGR---------------SDADSADAIFDAA 249 Query: 275 MKEAGICIAPSPARIGRSLVELLG 298 ++ AG ++ ++ ++LG Sbjct: 250 LRRAGAVRVRYFVQLFSAV-KVLG 272 >gi|239927752|ref|ZP_04684705.1| hypothetical protein SghaA1_05964 [Streptomyces ghanaensis ATCC 14672] gi|291436092|ref|ZP_06575482.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291338987|gb|EFE65943.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672] Length = 714 Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 99/283 (34%), Gaps = 18/283 (6%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G +G+ G G IHP T + + +V + Sbjct: 264 VAVIGASGEPGKIGNSVMRNLVDGGFAGEIHPVNPRT---DDILGRKAYKSVTDVP--GE 318 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEKSSSRLIG 126 + +V +P A+ E IP V I G + E+ RL+G Sbjct: 319 VDVAVFAIPARFVASALREVGRKRIPNAVLIPSGFAETGEHGLQEEIVQVAEEYGIRLLG 378 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 PN G + KG V + S+SG + + G S VG+G Sbjct: 379 PNIYGYYSTWQDLCATFCTPYDVKGGVALTSQSGGIGMAVLGFARTTKTGVSAIVGLGNK 438 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + D+L F D TE I M E ++ F++ KKP+V AG+ Sbjct: 439 --SDLDEDDLLTWFGEDPRTECIAMHLEDL----KDGRAFVEAARATVPKKPVVVLKAGR 492 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 TA R G ++G +D +++AG+ AP + Sbjct: 493 TAAGARAAGSHTGALAGDDAVYDD---ILRQAGVVRAPGLNEM 532 >gi|152981509|ref|YP_001352806.1| oxidoreductase [Janthinobacterium sp. Marseille] gi|151281586|gb|ABR89996.1| oxidoreductase [Janthinobacterium sp. Marseille] Length = 516 Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 51/224 (22%), Positives = 99/224 (44%), Gaps = 21/224 (9%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+A A+E +N +V+ V + A ++E + ++ ++ + V D + +K Sbjct: 102 YATLASARENVPGSNLAVVSVNGAYAVREARAALEQGLN-VMLFSDNVSVEDELALKQLA 160 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 ++GP+C + + + G+ R+G++GI+ SGT + E + G G Sbjct: 161 HSKGLLMMGPDCGTAIINNK---ALCFGNHVRQGNIGIIGASGTGSQELSVRIHDFGGGV 217 Query: 178 STAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D + + AD+ T+ IV++ + ++ E + + E R Sbjct: 218 SQLIGTGGRDLHEKIGGIMMLDAMRMLDADDQTKVIVLISKPPAASVE---KKVLAEISR 274 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKE 277 K +V F+ GK A + GG K A+K Sbjct: 275 CSKPVVVCFIGGKEADVVKA---------GGVFAKSTKEAALKA 309 >gi|148257026|ref|YP_001241611.1| hypothetical protein BBta_5753 [Bradyrhizobium sp. BTAi1] gi|146409199|gb|ABQ37705.1| hypothetical protein BBta_5753 [Bradyrhizobium sp. BTAi1] Length = 897 Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 13/233 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 VI PP D I + + IT G+ P + + ++ RLIGP Sbjct: 70 PELVVITTPPPSIPDLIDGAGALGAAGALIITSGLGHGPGSLADQAEKAAQRYGMRLIGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 NC GI+ P + GS+ ++S+SG + V +Q G+G S V IG Sbjct: 130 NCLGIMMPAIKLNASFSAHMPVAGSLALISQSGAIAAGMVDWAAQRGVGFSGIVSIGDQL 189 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + L+ F D T +I++ E A ++A +F+ R KP+V +G+ Sbjct: 190 DVDLADL--LDHFALDGGTRAILLYIE----AVKDARKFMSAARGAARVKPVVVVKSGRG 243 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 A R ++G + A + AG+ + E LG + Sbjct: 244 AVGARAAATHTGALAGADAVYD---AAFRRAGVLRVSDLRELFDC-AETLGRV 292 >gi|54302601|ref|YP_132594.1| putative acetyltransferase [Photobacterium profundum SS9] gi|46916025|emb|CAG22794.1| putative acetyltransferase [Photobacterium profundum SS9] Length = 909 Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 99/267 (37%), Gaps = 25/267 (9%) Query: 45 GSTYWTGGNVNVPVFTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPL 97 ++ P + VA + +++ D I + + + Sbjct: 35 AGSFHGPIMPVTPKYDAVAGVLAYPTIDSLPRIPDLAILCTNAHRNADIIDQLGKKGVKF 94 Query: 98 IVCITEGIP-------VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + + G+ + ++ ++ R++GPN G++ P K Sbjct: 95 AIVLAAGMNLTVSSKGETEEAKMYNIAKQHGMRIVGPNSMGLILPWLNLNASFSPISANK 154 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G++ +S+S + + + +G ST + +G F ++L+ D TE+I+ Sbjct: 155 GNIAFISQSAAVCTTILDWAKNKSIGFSTFLSLG--DACDVNFAELLDYLCRDSKTEAIL 212 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + + + ++A +F+ R + I+ +G+T A + +GG+ G + Sbjct: 213 LYVD----SIKDARRFMSAARAAARNRRILVLKSGRTEAG----SAAAHLHTGGEIGLDA 264 Query: 271 KI-NAMKEAGICIAPSPARIGRSLVEL 296 A++ +G+ + + ++ L Sbjct: 265 VYDAAIRRSGMLRVHNTHELFAAVETL 291 >gi|206564548|ref|YP_002235311.1| putative acetyl-CoA synthetase [Burkholderia cenocepacia J2315] gi|198040588|emb|CAR56574.1| putative acetyl-CoA synthetase [Burkholderia cenocepacia J2315] Length = 785 Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 61/289 (21%), Positives = 104/289 (35%), Gaps = 31/289 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + +AG+ G + P G+ V + V Sbjct: 15 VAVVGASSRAGSIGAMVWSRVLDGAFQGPVWPVNPKYRELDGHA---VVSDVDRLPA--P 69 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS---SRLIGP 127 + +VI PP+ + + E + V + E D V L+ + R++GP Sbjct: 70 PSVAVICTPPATWAGIVRKLGELGTRVAVIVGEARTDADRAAVDRTLKAAKPFVLRIVGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G+L+P P R G V +S+S LT + GLG S V +GG+ Sbjct: 130 GSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWAHARGLGFSHVVALGGE- 188 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + DVL+ +D T +I++ + + A +F+ R KP++ G+ Sbjct: 189 -SDVDAGDVLDYLASDPGTRAILLELDTVRA----ARKFMSAARAAARNKPVLALRTGR- 242 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A PG + A A + AG+ + + + L Sbjct: 243 ADPGDALYTA----------------AFQRAGMVRVDALDDLLDEIETL 275 >gi|224584506|ref|YP_002638304.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224469033|gb|ACN46863.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 886 Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 82/226 (36%), Gaps = 15/226 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + +++ S + + ++ P + A RL+GPN Sbjct: 70 PDLAILCTNASRNLALLDALGAKGCKTCIILSA--PTSQHEELLACARHYKMRLLGPNSL 127 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G+L P ++G + +S+S ++ + Q +G S + +G Sbjct: 128 GLLAPWQGLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDID 187 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 + ++L+ D T +I++ E +A +F+ R KPI+ +G++ P Sbjct: 188 VD--ELLDYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PA 240 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + + A + A++ AG+ + ++ L Sbjct: 241 AQRLLNTSAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|83647499|ref|YP_435934.1| acyl-CoA synthetase (NDP forming) [Hahella chejuensis KCTC 2396] gi|83635542|gb|ABC31509.1| Acyl-CoA synthetase (NDP forming) [Hahella chejuensis KCTC 2396] Length = 910 Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 86/237 (36%), Gaps = 20/237 (8%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD-------MVRVKARLEKSS 121 + ++I PP + ++ + +T G+ M V+ + Sbjct: 69 FRPDLAIICTPPESVPRIVRVLGNVKVKTAMILTGGLSRTHSRSGRPLMYSVQEIASEYG 128 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R++GP G+L+P S G + + +SG+L + G+G S Sbjct: 129 IRILGPETIGMLSPASNLNATYMHMGVLPGKIAYIGQSGSLASAVIDWAFTRGIGFSHLT 188 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G G + D+++ D +T++I++ E S +F+ R K ++ Sbjct: 189 TLGDGIDVGLD--DLIDYLAQDRSTKAILLHMENIHSP----RRFISAVRAVSRGKLVIA 242 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARIGRSLVEL 296 +G+T P A + G DKI + AG+ + +L L Sbjct: 243 VKSGRT--PASQWRPAELPLGVVDG---DKIFDAVFRRAGVLRVNGADEMFDALETL 294 >gi|221200669|ref|ZP_03573710.1| acetyltransferase, gnat family [Burkholderia multivorans CGD2M] gi|221208498|ref|ZP_03581500.1| acetyltransferase, gnat family [Burkholderia multivorans CGD2] gi|221171686|gb|EEE04131.1| acetyltransferase, gnat family [Burkholderia multivorans CGD2] gi|221179241|gb|EEE11647.1| acetyltransferase, gnat family [Burkholderia multivorans CGD2M] Length = 784 Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 102/289 (35%), Gaps = 31/289 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + +AG+ G + P G+ VP V Sbjct: 15 VAVVGASSRAGSIGAMVWSRVLDGAFDGPVWPVNPKHRELDGHAVVP---DVDRLPA--P 69 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS---SRLIGP 127 + +VI P+ + + E + + + + D + L+ + R++GP Sbjct: 70 PSVAVICTRPATWAGIVRKLGELGTRVAIIVGDARSDADRAALDRALKAAKPFVLRIVGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G+L+P P R G V +S+S LT + + GLG S V +GG+ Sbjct: 130 GSLGVLSPARHAHFGAPAYTVRSGGVAWVSQSNALTNAVLGWANARGLGFSHVVALGGEA 189 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + DVL+ +D T +I++ + + A +F+ R KP++ G+ Sbjct: 190 --DVDAGDVLDYLASDPGTRAILLELDSVRA----ARKFMSAARAAARNKPVLALRTGRA 243 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 P G A A + AGI + + + L Sbjct: 244 DPG------------DGLYTA-----AFQRAGIVRVDALDDLLDEIETL 275 >gi|34557415|ref|NP_907230.1| hypothetical protein WS1029 [Wolinella succinogenes DSM 1740] gi|34483131|emb|CAE10130.1| conserved hypothetical protein [Wolinella succinogenes] Length = 644 Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 102/255 (40%), Gaps = 25/255 (9%) Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 ++P KG + P+F V + +V+ +P S I + + + +V Sbjct: 260 VNP-KGGELFG-----RPLFQNVEAIP--GDVDMAVLVIPVSSVIPTIEKLVLKNLKNLV 311 Query: 100 CITEGIPV----LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGI 155 IT G D +++ +K + +IGPNC G S S KG++ + Sbjct: 312 IITAGFKESGNEEDELKIAELAKKHNFNVIGPNCLGYYNAQSDLNLTFGSSNVHKGNLAL 371 Query: 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEI 215 +S+SG + + + +G S + G + F +++++ +AD A E+I + E Sbjct: 372 ISQSGAVLASLMDKAYSGNVGFSHLISAGN--MVDLNFSEMVDMLVADPACEAISVYAE- 428 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINA 274 + +FL+ + +K I F GK+ + H G + G E Sbjct: 429 ---GIKNGKRFLRSIRRSHKK--IYVFKTGKSEESKKAAFSHTGNL----SGNYEMFKGL 479 Query: 275 MKEAGICIAPSPARI 289 ++ G+ + + + Sbjct: 480 LEGVGVKMEDNIEAL 494 >gi|330998790|ref|ZP_08322518.1| acetyl coenzyme A synthetase, alpha domain protein [Parasutterella excrementihominis YIT 11859] gi|329576287|gb|EGG57803.1| acetyl coenzyme A synthetase, alpha domain protein [Parasutterella excrementihominis YIT 11859] Length = 711 Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 110/295 (37%), Gaps = 28/295 (9%) Query: 11 VLVQGLTGKA---GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 V V G + K G+ ++ + Y T + I+PK + + +V E E Sbjct: 13 VAVIGASNKEHTIGSDIMKRLVEYGFTGKIFPINPK------DSEIQGMTAYPSVLEVPE 66 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSS 121 + +VI + A+ + + I IV I+ G ++ ++ + Sbjct: 67 E--IDMAVIVINAKYVLSAVDQCHQKGIKGIVVISAGFKETGGAGAELEAKLVNKVREYG 124 Query: 122 SRLIGPNCPGILTPDSCK--IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 +GPNC G++ D S+ +G +G +S+SG L + LG + Sbjct: 125 MTCVGPNCLGVVNTDPKFRLDACFAESLPVRGDIGFVSQSGALGGGILNILQDLNLGFAQ 184 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + IG +E + + + I++ E + +F ++ +KKPI Sbjct: 185 FISIGNQA--DVNADSAIEYWENVDDVKQILLYMESIA----DPKRFRALASRTSKKKPI 238 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 + AG++A ++G A+ +K++G+ S + + Sbjct: 239 IALKAGRSAAGASAASSHTGSLAGADKAADAL---LKQSGVIREFSLQDLFNTAK 290 >gi|153800666|ref|ZP_01955252.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|124123801|gb|EAY42544.1| conserved hypothetical protein [Vibrio cholerae MZO-3] Length = 893 Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 102/286 (35%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q V +P ++P+ +A + N S+ Sbjct: 26 GNIVMKNLLQGGFDGAIMPVTPYYPAVCGVLAYKTISDLPIVPDIAILCTHASRNVSLF- 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 + E + ++ ++ + + + + R++GPN G Sbjct: 85 ----------KQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMTIAKSVNMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWMQFNGSFSPVSALKGNIAFVSQSAAVCTTILDWANDKGIGFSAFISLGNA--SDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D+ T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDNTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|170737107|ref|YP_001778367.1| GCN5-related N-acetyltransferase [Burkholderia cenocepacia MC0-3] gi|169819295|gb|ACA93877.1| GCN5-related N-acetyltransferase [Burkholderia cenocepacia MC0-3] Length = 785 Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 103/289 (35%), Gaps = 31/289 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + +AG+ G + P G+ V + V Sbjct: 15 VAVVGASSRAGSIGAMVWSRVLDGAFQGPVWPVNPKYRELDGHA---VVSDVDRLPA--P 69 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS---SRLIGP 127 + +VI PP+ + + E + V + E D V L+ + R++GP Sbjct: 70 PSVAVICTPPATWAGIVRKLGELGARVAVIVGEARTDADRAAVDRMLKAAKPFVLRIVGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G+L+P P R G V +S+S LT + GLG S V +G + Sbjct: 130 GSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWADARGLGFSHVVALGSE- 188 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + DVL+ +D T +I++ + + A +F+ R KP++ G+ Sbjct: 189 -SDVDAGDVLDYLASDPGTRAILLELDTVRA----ARKFMSAARAAARNKPVLALRTGR- 242 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A PG + A A + AG+ + + + L Sbjct: 243 ADPGDALYTA----------------AFQRAGMVRVDALDDLLDEIETL 275 >gi|107027672|ref|YP_625183.1| GCN5-related N-acetyltransferase [Burkholderia cenocepacia AU 1054] gi|105897046|gb|ABF80210.1| GCN5-related N-acetyltransferase [Burkholderia cenocepacia AU 1054] Length = 785 Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 103/289 (35%), Gaps = 31/289 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + +AG+ G + P G+ V + V Sbjct: 15 VAVVGASSRAGSIGAMVWSRVLDGAFQGPVWPVNPKYRELDGHA---VVSDVDRLPA--P 69 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS---SRLIGP 127 + +VI PP+ + + E + V + E D V L+ + R++GP Sbjct: 70 PSVAVICTPPATWAGIVRKLGELGARVAVIVGEARTDADRAAVDRMLKAAKPFVLRIVGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G+L+P P R G V +S+S LT + GLG S V +G + Sbjct: 130 GSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWADARGLGFSHVVALGSE- 188 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + DVL+ +D T +I++ + + A +F+ R KP++ G+ Sbjct: 189 -SDVDAGDVLDYLASDPGTRAILLELDTVRA----ARKFMSAARAAARNKPVLALRTGR- 242 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A PG + A A + AG+ + + + L Sbjct: 243 ADPGDALYTA----------------AFQRAGMVRVDALDDLLDEIETL 275 >gi|116693618|ref|YP_839151.1| GCN5-related N-acetyltransferase [Burkholderia cenocepacia HI2424] gi|116651618|gb|ABK12258.1| GCN5-related N-acetyltransferase [Burkholderia cenocepacia HI2424] Length = 806 Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 103/289 (35%), Gaps = 31/289 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + +AG+ G + P G+ V + V Sbjct: 36 VAVVGASSRAGSIGAMVWSRVLDGAFQGPVWPVNPKYRELDGHA---VVSDVDRLPA--P 90 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS---SRLIGP 127 + +VI PP+ + + E + V + E D V L+ + R++GP Sbjct: 91 PSVAVICTPPATWAGIVRKLGELGARVAVIVGEARTDADRAAVDRMLKAAKPFVLRIVGP 150 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G+L+P P R G V +S+S LT + GLG S V +G + Sbjct: 151 GSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWADARGLGFSHVVALGSE- 209 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + DVL+ +D T +I++ + + A +F+ R KP++ G+ Sbjct: 210 -SDVDAGDVLDYLASDPGTRAILLELDTVRA----ARKFMSAARAAARNKPVLALRTGR- 263 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A PG + A A + AG+ + + + L Sbjct: 264 ADPGDALYTA----------------AFQRAGMVRVDALDDLLDEIETL 296 >gi|170690978|ref|ZP_02882144.1| GCN5-related N-acetyltransferase [Burkholderia graminis C4D1M] gi|170144227|gb|EDT12389.1| GCN5-related N-acetyltransferase [Burkholderia graminis C4D1M] Length = 796 Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 110/321 (34%), Gaps = 55/321 (17%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPK---KGSTYWTGGNVNVPVFTTVAEAKERTAANAS 74 G G + + + ++PK ++P TV + Sbjct: 25 GSTGAMVWARLLEGGFDGPLWPVNPKYHTLNGHAVIADAGDLPQAPTV-----------A 73 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL---EKSSSRLIGPNCPG 131 +I PP+ I + + + E D + ++ L R++GP G Sbjct: 74 LICTPPATWPSIIHKLGGLGTRAAIIVGEARCDDDRLALRHALSAARPHLLRIVGPGSLG 133 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 +++P P + G V +S+S LT + GLG S AV +GG+ Sbjct: 134 VVSPALRAHFGAPSCTVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVALGGEA--DV 191 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP-- 249 + DVL+ +D T +I++ + + A +F+ R KP++ +G+ P Sbjct: 192 DAGDVLDYLASDPGTRAILLELDSVRA----ARKFMSAARAAARNKPVLALRSGRADPAD 247 Query: 250 ------------------------------PGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 G +I+ +G A +A AG Sbjct: 248 ALYTAAFRRAGMVRVDALDDLLDEIETLGVGRVAAGATATLITSDRGLATLACDAFAAAG 307 Query: 280 ICIAPSPARIGRSLVELLGSL 300 +AP P ++L + L ++ Sbjct: 308 DTLAPWPDEASQALQQALPNV 328 >gi|254249659|ref|ZP_04942979.1| GCN5-related N-acetyltransferase [Burkholderia cenocepacia PC184] gi|124876160|gb|EAY66150.1| GCN5-related N-acetyltransferase [Burkholderia cenocepacia PC184] Length = 785 Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 103/289 (35%), Gaps = 31/289 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + +AG+ G + P G+ V + V Sbjct: 15 VAVVGASSRAGSIGAMVWSRVLDGAFQGPVWPVNPKYRELDGHA---VVSDVDRLPA--P 69 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS---SRLIGP 127 + +VI PP+ + + E + V + E D V L+ + R++GP Sbjct: 70 PSVAVICTPPATWAGIVRKLGELGARVAVIVGEARTDADRAAVDRMLKAAKPFVLRIVGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G+L+P P R G V +S+S LT + GLG S V +G + Sbjct: 130 GSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWADARGLGFSHVVALGSE- 188 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + DVL+ +D T +I++ + + A +F+ R KP++ G+ Sbjct: 189 -SDVDAGDVLDYLASDPGTRAILLELDTVRA----ARKFMSAARAAARNKPVLALRTGR- 242 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A PG + A A + AG+ + + + L Sbjct: 243 ADPGDALYTA----------------AFQRAGMVRVDALDDLLDEIETL 275 >gi|308274052|emb|CBX30651.1| hypothetical protein N47_E41630 [uncultured Desulfobacterium sp.] Length = 469 Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 88/256 (34%), Gaps = 24/256 (9%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 +G I+P V + ++ + + + + I +P A+ + + + Sbjct: 42 FMGSIYPVNPQ---ADKVQGVRAYKSILDVPDE--IDLAHIIIPAKFVPQAVEDCGKKGV 96 Query: 96 PLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSI 147 I+ + G +R +K R+ GPNC GI+ PD + Sbjct: 97 KSIIINSAGFKETGPEGAAIEKDFLSRAKKYGIRIFGPNCQGIINTDPDVRAYCNFAFTK 156 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 G + I ++SG ++ G+G G +++E F D T Sbjct: 157 PEPGYISIAAQSGGAGELIHQGFAEIGIGTRLYASNGNA--CDISIQEIIEYFGKDPGTR 214 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT-MGHAGAVISGGKG 266 +V+ E E +F++ K KKP++ G+T R H G Sbjct: 215 VVVLYIESISDPE----KFIETARKVSDKKPVLAMKVGRTGEGARAVSSHIGGFSENDIN 270 Query: 267 GAEDKINAMKEAGICI 282 ++AG+ I Sbjct: 271 TDLV----FEKAGVLI 282 >gi|315181563|gb|ADT88476.1| acyl-CoA synthetase [Vibrio furnissii NCTC 11218] Length = 895 Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 105/285 (36%), Gaps = 34/285 (11%) Query: 36 VVGGIHPKKGSTYW-------TGGNVNVPV---FTTVAEAKERTAANA-------SVIYV 78 + I P + +PV + +V +A +++ Sbjct: 16 IGASIRPFRAGNIVMKNLLQGGFDGAIMPVTPYYPSVCGVLAYKTIDALPLVPDIAILCT 75 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGI 132 S + + + ++ ++ + LD + A ++S R++GPN G+ Sbjct: 76 HASRNVTIFRQLADKGVSNVIVLSSDMYTLDAQGREIQEQCTAIAKESGMRVLGPNSLGL 135 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 + P G +G++ +S+S + + + + +G S V +G + Sbjct: 136 ILPWINFNGSFSPVTASRGNIAFISQSAAVCTTILDWANDKQIGFSAFVSLGNA--SDID 193 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 F D+L+ D+ T++I++ + ++A +F+ R + I+ G+T Sbjct: 194 FSDLLDCLSTDKHTDAILLYVDTI----KDARRFMSAARAASRNRRILVLKGGRT----T 245 Query: 253 TMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 A + +GG + +A++ G+ + + ++ L Sbjct: 246 AGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|329296720|ref|ZP_08254056.1| GCN5-like N-acetyltransferase [Plautia stali symbiont] Length = 893 Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 97/279 (34%), Gaps = 23/279 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AG + V + PK G + P VA A + ++I Sbjct: 25 GRAGYLMMRNLLAGGFGGPVLPVTPK---YKAVSGVLAWP---DVASLP--FAPDLAIIC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + + E + ++ P + +KA + RL+GPN G+L P Sbjct: 77 THARRNLELLQQLGEKGCKACIILSA--PTSQLEALKACASQWQMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 KG + +S+S ++ + Q LG S + +G + + L Sbjct: 135 GLNASFSPVPIAKGRIAFISQSAAVSNTILDWAQQRNLGFSWFIALGDSLDIDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R K I+ +G+ A Sbjct: 193 DFLARDGKTSAILLYLEHLS----DARRFVSASRSAARNKLILVIKSGR-------SHQA 241 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A+I G A++ AG+ + ++ L Sbjct: 242 QAMIGTASGLDAAWDAAIQRAGLLRVQDTHELFSAVESL 280 >gi|319763101|ref|YP_004127038.1| CoA-binding domain protein [Alicycliphilus denitrificans BC] gi|317117662|gb|ADV00151.1| CoA-binding domain protein [Alicycliphilus denitrificans BC] Length = 703 Score = 92.4 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 93/284 (32%), Gaps = 26/284 (9%) Query: 26 EQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGD 85 T + ++P + + ++A + + ++I + Sbjct: 43 AYMRARGYTGAIYPVNPSR------EEVQGLRCHPSIAAIGQ--PVDLAIIGTAAAHVEG 94 Query: 86 AIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCK 139 AI E I A + V + G LD A ++GPNC GI S Sbjct: 95 AIREGIAAGVKAFVVFSSGFAELDEAGRALQKRLTALARAHGVAIVGPNCLGIANSRSGL 154 Query: 140 IGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 + ++G +S+SG L + + G+G S V G + + D Sbjct: 155 LATFTTALESHALQQGGFSFVSQSGALGAYWMDIVLRNGIGFSQWVTTGNE--CDVDAAD 212 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +E +AD T+ I + E + A + KP++ AG ++ Sbjct: 213 AIEFLVADPDTKVIGLYIEDIRRIDAFRAALDRAARAG---KPVIAIKAGSSSAGAAAAA 269 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 ++G + +++ G S + + LL + Sbjct: 270 SHTGALAGNDALYD---ACLQQHGALRVRSLTEMMDAARLLLHN 310 >gi|11499522|ref|NP_070763.1| hypothetical protein AF1938 [Archaeoglobus fulgidus DSM 4304] gi|2648606|gb|AAB89317.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 673 Score = 92.4 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 109/289 (37%), Gaps = 27/289 (9%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + G Q +G I+P + + + + ++ + + Sbjct: 227 VAVIGASRTVGKPGFNIVWNLKQNGFMGKIYPVNPN---ADKILELKCYPSILDIPDE-- 281 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRL 124 + ++I VP + + E + I V ++ G RV +K R+ Sbjct: 282 VDMAIIAVPAKIVPEVMAECAQKGIKGAVIVSSGFSEEGEKGAEYERRVLEIAKKHGIRI 341 Query: 125 IGPNCPGILTPDSCKIGIMPGSIF-RKGSVGILSRSGTLTYEAVFQTSQEG--LGQSTAV 181 GPN G+L ++ I +KG++GI++++G + + +G S V Sbjct: 342 FGPNTTGVLNTENGFITSFAIQPVIKKGNIGIIAQTGLFLGIMMDIVTSNHPSIGFSKIV 401 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G+G E +VL+ L DE T+ I + E + + +KPIV Sbjct: 402 GMGNK--IDVEDYEVLDFLLKDEQTKVIGIYMEGIKNGRA------FYDVASSAEKPIVV 453 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 F +G+T + A I G +D +A ++A + S + Sbjct: 454 FKSGRTEYGQKAAMSHTASICGD----DDVFDAVCRQANLVRVYSFDEL 498 >gi|27378557|ref|NP_770086.1| 6-carboxyhexanoate--COA ligase [Bradyrhizobium japonicum USDA 110] gi|27351705|dbj|BAC48711.1| blr3446 [Bradyrhizobium japonicum USDA 110] Length = 707 Score = 92.4 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 95/248 (38%), Gaps = 24/248 (9%) Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV-- 111 + + +VAE E + ++I V AG+A+ + + +V + G L Sbjct: 56 QGLKAYASVAEVPEAP--DLAIIAVDAERAGEAVEQCAARGVRSVVVFSSGFAELGEQGR 113 Query: 112 ----RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP----GSIFRKGSVGILSRSGTLT 163 R++ S RL+GPNC G ++ I S+ GS+GI+S+SG L Sbjct: 114 AMQDRLRLAARNSGMRLLGPNCLGAVSVAEKSIATFSIVLEHSMPAAGSLGIVSQSGNLG 173 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEA 223 + S+ G+G S + G + + D + D AT+ I+ E A Sbjct: 174 SYTMRLASERGVGVSRFITTGNE--CDVDIADGIAWMARDPATKVILCCLEACRDA-GRL 230 Query: 224 AQFLKDEAKRGRKKPIVGFVAGK-TAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGIC 281 L++ G KP++ G A H GA+ G++ +A G Sbjct: 231 ISALEEARDAG--KPVIAMKIGTSAAGQAAAASHTGAMA-----GSDAVFDALFARCGAV 283 Query: 282 IAPSPARI 289 S + Sbjct: 284 RVRSIDEL 291 >gi|297273034|ref|XP_001108114.2| PREDICTED: ATP-citrate synthase isoform 2 [Macaca mulatta] Length = 1011 Score = 92.4 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 6/118 (5%) Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 G+ F+D + + + IV++GEIGG+ E + + +K+ KPIV + G Sbjct: 600 HQYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGIKEGR---LTKPIVCWCIG 656 Query: 246 KTAPPG---RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 A GHAGA + A K A+KEAG+ + S +G + + L Sbjct: 657 TCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELGEIIQSVYEDL 714 Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 63/172 (36%), Gaps = 11/172 (6%) Query: 2 SILVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVN 55 + L ++TK +V G+ + G + + V ++P K YW + Sbjct: 490 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEIL 549 Query: 56 VPVFTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEA--EIPLIVCITEGIPVLDMVR 112 +PVF +A+A + + + + A D+ +E++ + P ++ P + Sbjct: 550 IPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQQDPDLLLFPHQYPGSTFMD 609 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKI--GIMPGSIFRKGSVGILSRSGTL 162 R + + + I + KI GI G + + + T+ Sbjct: 610 HVLRYQDTPGVKMIVVLGEIGGTEEYKICRGIKEGRLTKPIVCWCIGTCATM 661 >gi|328885564|emb|CCA58803.1| acyl-CoA synthetase [Streptomyces venezuelae ATCC 10712] Length = 984 Score = 92.4 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 88/253 (34%), Gaps = 20/253 (7%) Query: 45 GSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEG 104 G T VP + +VA E + +++ VP + + + E + +V ++ G Sbjct: 257 GGTAEAVELDGVPAYPSVAAIGE--PVDLAIVAVPAERVPEVVADCGEHGVQGLVVLSAG 314 Query: 105 IPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGIL 156 ++ + R+IGPN GI+ + + + G +G+ Sbjct: 315 YAESGAAGRERQRQLVRQARSYGMRIIGPNAFGIINTAAEVSLNASLAPQMPAAGRIGLF 374 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIG 216 ++SG + + + G G S+ + G D L+ + D T+ +++ E Sbjct: 375 TQSGAIGIALLAGLHRRGAGLSSFISAGNRA--DVSGNDFLQHWYDDPGTDVVLLYLESI 432 Query: 217 GSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMK 276 G+ + + A + +G P R + + ++ Sbjct: 433 GNPRKFTRLARRTAAVKPVVVVKGARHSGSAPPGHR--------VPVTRVPHATVSALLR 484 Query: 277 EAGICIAPSPARI 289 +AG+ + + Sbjct: 485 QAGVIRVDTVTEL 497 >gi|157382704|gb|ABV48790.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA6] Length = 335 Score = 92.4 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 44/108 (40%) Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 F+D + F + + +V++GE+GG E A+ +KD K Sbjct: 1 FLDHMLRFEKNPQVKMMVLLGEVGGELEYRVAEAIKDGRITKPVIAWCIGTISKHFGGEV 60 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GHAGA + A+ K A++EAG + S + + + L Sbjct: 61 QFGHAGAKAGAERETADAKNEALREAGAYVPKSFNDLPELIRGVYEEL 108 >gi|157382702|gb|ABV48789.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA1] Length = 336 Score = 92.4 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 45/109 (41%) Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F+D + + + + +V++GE+GG E A+ +KD K Sbjct: 1 DFLDHMLRYEKNPQVKMMVLLGEVGGELEYRVAEAIKDGRITKPVIAWCIGTISKHFGGE 60 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GHAGA + A+ K A++EAG + S + + + L Sbjct: 61 VQFGHAGAKAGAERETADAKNEALREAGAYVPKSFNDLPELIRGVYEEL 109 >gi|260770477|ref|ZP_05879410.1| protein acetyltransferase [Vibrio furnissii CIP 102972] gi|260615815|gb|EEX41001.1| protein acetyltransferase [Vibrio furnissii CIP 102972] Length = 895 Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 105/285 (36%), Gaps = 34/285 (11%) Query: 36 VVGGIHPKKGSTYW-------TGGNVNVPV---FTTVAEAKERTAANA-------SVIYV 78 + I P + +PV + +V +A +++ Sbjct: 16 IGASIRPFRAGNIVMKNLLQGGFDGAIMPVTPYYPSVCGVLAYKTIDALPLVPDIAILCT 75 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGI 132 S + + + ++ ++ + LD + A ++S R++GPN G+ Sbjct: 76 HASRNVTIFRQLADKGVSNVIVLSSDMYTLDAQGREIQEQCTAIAKESGMRVLGPNSLGL 135 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 + P G +G++ +S+S + + + + +G S V +G + Sbjct: 136 ILPWINFNGSFSPVTASRGNIAFISQSAAVCTTILDWANDKQIGFSAFVSLGNA--SDID 193 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 F D+L+ D+ T++I++ + ++A +F+ R + I+ G+T Sbjct: 194 FSDLLDCLSTDKHTDAILLYVDTI----KDARRFMSAARAASRNRRILVLKGGRT----T 245 Query: 253 TMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 A + +GG + +A++ G+ + + ++ L Sbjct: 246 AGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|301057368|ref|ZP_07198485.1| CoA binding domain protein [delta proteobacterium NaphS2] gi|300448511|gb|EFK12159.1| CoA binding domain protein [delta proteobacterium NaphS2] Length = 454 Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 24/256 (9%) Query: 37 VGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIP 96 V ++P KG P + E+ + ++I V D + I A + Sbjct: 41 VFAVNP-KGGQIQGERLYERP-----EDIPEK--VDLAIIAVRADLVPDTMARCISAGMG 92 Query: 97 LIVCITEGIPVLDMVRVKARLEKSSSR----LIGPNCPGILTPDSCKIGIMPGSI---FR 149 V I+ G + + ++ RL K + +GPNC GI +P +P Sbjct: 93 GAVIISGGFAEVGEMELQDRLLKMALEADFPFVGPNCLGIFSPARMDTFFLPPERTVRPA 152 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 G+V ++S+SG + + + S EG+G S V IG + + + +LE D T++I Sbjct: 153 PGNVALVSQSGGVLVDQIVNFSGEGIGLSLGVSIGNKAL--VDEVTLLEYLSEDPKTDAI 210 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 E G ++ +F++ + +KPIV +G++ + A ++ G E Sbjct: 211 AFYLE--GFSKNGGRKFVEAACQC--EKPIVVLKSGRSPEGRHAVSSHTASLA---GDYE 263 Query: 270 DKINAMKEAGICIAPS 285 M + G+ A + Sbjct: 264 VFSQVMAQFGVIEART 279 >gi|192360572|ref|YP_001981539.1| GNAT family acetyltransferase [Cellvibrio japonicus Ueda107] gi|190686737|gb|ACE84415.1| acetyltransferase, GNAT family [Cellvibrio japonicus Ueda107] Length = 826 Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 84/254 (33%), Gaps = 23/254 (9%) Query: 57 PVFTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 P + +V + + +VI + I++ + I G+ L Sbjct: 49 PHYKSVNGVLAYRSIDELPLVPDLAVICTRATRVPAIILQLGRKGTRAAIVIAAGLNRLH 108 Query: 110 MVR-------VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTL 162 + + A + R++GPN G++ P + R G + +S+S + Sbjct: 109 TAQGTNLQEQMLAIARQWGVRILGPNSLGLMVPGIGLDASYAHTRARAGKIAFVSQSSAV 168 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 + + +G S V +G +F ++L+ D T +I++ + + Sbjct: 169 CVTLLDWAKRRRIGFSHVVALGDG--TDVDFDEMLDYLGRDANTSAILLYIDHI----HQ 222 Query: 223 AAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 F+ KPI+ G + H + G A+K AG+ Sbjct: 223 GRAFMSAARAASFNKPILVIKTGAQLENQMLISH---LPMEQLGLDAVYDAAIKRAGMLR 279 Query: 283 APSPARIGRSLVEL 296 + ++ L Sbjct: 280 VGDLRELLAAVETL 293 >gi|297517289|ref|ZP_06935675.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli OP50] Length = 244 Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 86/235 (36%), Gaps = 18/235 (7%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPDIASLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E + ++ P ++A + + RL+GPN G+L P Sbjct: 77 TNASRNLALMEELGEKGCKTCIILSA--PASQHEDLRACALRHNMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 + ++G + +S+S ++ + Q +G S + +G + ++L Sbjct: 135 GLNASFSPVLIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELL 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 + D T +I++ E +A +F+ R KPI+ +G++ R Sbjct: 193 DYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRSPAAQR 243 >gi|55420465|gb|AAV52080.1| putative acyl-CoA synthetase [Nocardioides sp. JS614] Length = 691 Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 91/269 (33%), Gaps = 23/269 (8%) Query: 36 VVGGIHPKKG-STYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE 94 VG ++P G G V +TT+ E + +V+ VP + + ++ Sbjct: 38 FVGDVYPVNGSGRPVDG----VRAYTTLLEIP--YPIDLAVLVVPATAVPAVVQDAAARG 91 Query: 95 IPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIM-PGSI 147 IP V IT G V R++GPNC G+ + P Sbjct: 92 IPACVVITAGFAEAGPGGERLQAEVMKIARVGGVRIVGPNCFGVQNAAVGLNASLSPAMT 151 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 GS+ ++++SG E L G ++L+ +D + Sbjct: 152 GGSGSLSLVTQSGAYGMALHSLAEDENLCFDKVYATGNKA--DFTDTELLDYLASDGGSG 209 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 I E + F+ + R +P++ G++A R A ++G + Sbjct: 210 PICFFLESL----PDGRAFVDMARRVTRTRPVIVCRTGRSADGSRAARSHTASLAGQQRV 265 Query: 268 AEDKINAMKEAGICIAPSPARIGRSLVEL 296 A +AGI + + + + L Sbjct: 266 WS---EAFAQAGITVTRTGLEMLDAARAL 291 >gi|119714116|ref|YP_919258.1| CoA-binding domain-containing protein [Nocardioides sp. JS614] gi|119526025|gb|ABL79395.1| CoA-binding domain protein [Nocardioides sp. JS614] Length = 693 Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 91/269 (33%), Gaps = 23/269 (8%) Query: 36 VVGGIHPKKG-STYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE 94 VG ++P G G V +TT+ E + +V+ VP + + ++ Sbjct: 40 FVGDVYPVNGSGRPVDG----VRAYTTLLEIP--YPIDLAVLVVPATAVPAVVQDAAARG 93 Query: 95 IPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIM-PGSI 147 IP V IT G V R++GPNC G+ + P Sbjct: 94 IPACVVITAGFAEAGPGGERLQAEVMKIARVGGVRIVGPNCFGVQNAAVGLNASLSPAMT 153 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 GS+ ++++SG E L G ++L+ +D + Sbjct: 154 GGSGSLSLVTQSGAYGMALHSLAEDENLCFDKVYATGNKA--DFTDTELLDYLASDGGSG 211 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 I E + F+ + R +P++ G++A R A ++G + Sbjct: 212 PICFFLESL----PDGRAFVDMARRVTRTRPVIVCRTGRSADGSRAARSHTASLAGQQRV 267 Query: 268 AEDKINAMKEAGICIAPSPARIGRSLVEL 296 A +AGI + + + + L Sbjct: 268 WS---EAFAQAGITVTRTGLEMLDAARAL 293 >gi|285016968|ref|YP_003374679.1| hypothetical protein XALc_0147 [Xanthomonas albilineans GPE PC73] gi|283472186|emb|CBA14693.1| hypothetical protein XALc_0147 [Xanthomonas albilineans] Length = 894 Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 9/179 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 + VI P + + + + +T G+ P RV+ R++GP Sbjct: 70 PDLVVITAPARMVPRIVAIAARRGVASAIILTAGLGSGPGSAAARVEHVARVKGLRVLGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 +C G++ P + + + G + ++S S + V +G S V +G Sbjct: 130 HCLGVIAPHARLNASIAAHCPQPGDLALVSESSAIAAALVEWGVARAVGFSAVVSLG--D 187 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 +F D+L+ F DE T +I++ E +A +F+ R KP+V +G+ Sbjct: 188 TLDVDFADLLDYFATDERTRAILLYVEHI----RDARKFMSAARAAARAKPVVVVKSGR 242 >gi|213859698|ref|ZP_03385402.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 522 Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 82/226 (36%), Gaps = 15/226 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + +++ S + + ++ P + A RL+GPN Sbjct: 11 PDLAILCTNASRNLALLDALGAKGCKTCIILSA--PTSQHEELLASARHYKMRLLGPNSL 68 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G+L P ++G + +S+S ++ + Q +G S + +G Sbjct: 69 GLLAPWQGLNASFSPVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDID 128 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 + ++L+ D T +I++ E +A +F+ R KPI+ +G++ P Sbjct: 129 VD--ELLDYLARDSKTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PA 181 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + + A + A++ AG+ + ++ L Sbjct: 182 AQRLLNTSAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 221 >gi|330507720|ref|YP_004384148.1| CoA-binding domain-containing protein [Methanosaeta concilii GP-6] gi|328928528|gb|AEB68330.1| CoA-binding domain protein [Methanosaeta concilii GP-6] Length = 693 Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 103/286 (36%), Gaps = 26/286 (9%) Query: 13 VQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAAN 72 V G +G G + G ++P G P + V E + Sbjct: 255 VIGASGTPGKLGWNVFTNLVSHKFKGMLYPINPRAEEIHGIKAYPRISAVPERV-----D 309 Query: 73 ASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIG 126 ++I V D + E + + IV + G L +++K ++ RL+G Sbjct: 310 VAIILVSAGMTADVVEECCQCGVRYIVVESAGFAELGPEGKKIELQMKEIADRYGVRLLG 369 Query: 127 PNCPGILTPDSCK---IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 PNC GI+ IGI+ +G++G++S++G ++ + + I Sbjct: 370 PNCSGIINTHCSMVQSIGIV--DALSQGNIGLVSQAGVCAAGMLWGL-RHIMDFGIIATI 426 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G D++E DE I M E + +F+ + KKPIV Sbjct: 427 GNK--LDINETDIMEAVSKDENINVICMYLESV----KGGRRFIDQARQITMKKPIVVLK 480 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +G+T + + A ++G +++GI A + Sbjct: 481 SGRTEAGKKAVASHTASLAGNDQIYSAV---FRQSGIIRARDYEHM 523 >gi|134292400|ref|YP_001116136.1| GCN5-related N-acetyltransferase [Burkholderia vietnamiensis G4] gi|134135557|gb|ABO56671.1| GCN5-related N-acetyltransferase [Burkholderia vietnamiensis G4] Length = 813 Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 54/285 (18%), Positives = 97/285 (34%), Gaps = 40/285 (14%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPK---KGSTYWTGGNVNVPVFTTVAEAKERTAANAS 74 G G + + V ++PK G G +P + + Sbjct: 53 GSVGAMVWARVLDGGFEGPVWPVNPKYRELGGHTVIGDVERLPA-----------PPSVA 101 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS---SRLIGPNCPG 131 VI PP+ + + E V + + D + L+ + R++GP G Sbjct: 102 VICTPPATWAGIVHKLGELGTRAAVIVGDARTDADRAALDRALKAAKPFVLRIVGPGSLG 161 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 +L+P P R G V +S+S LT + + GLG S V +G + Sbjct: 162 VLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWANARGLGFSHVVALGSEA--DV 219 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 + DVL+ +D T +I++ + + A +F+ R KP++ G+ Sbjct: 220 DAGDVLDYLASDPGTRAILLELDTVCA----ARKFMSAARAAARNKPVLALRTGR----- 270 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G G A + AG+ + + + L Sbjct: 271 ------------GDPGDALYTAAFQRAGMVRVDALDDLLDEIETL 303 >gi|327311732|ref|YP_004338629.1| CoA-binding domain-containing protein [Thermoproteus uzoniensis 768-20] gi|326948211|gb|AEA13317.1| CoA-binding domain protein [Thermoproteus uzoniensis 768-20] Length = 463 Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 104/271 (38%), Gaps = 21/271 (7%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P G G V + +V + ++ + +V+ VP + E+ + + Sbjct: 42 LVNPNYGEGVIEGRTVKF--YRSVLDIEDE--VDMAVVAVPAKAVPGVLEEAGRKGVKVA 97 Query: 99 VCITEGIPVLDMVRVKARLEK----SSSRLIGPNCPGILTP----DSCKIGIMPGSIFRK 150 V ++ G ++A + + R++GPNC G+ D+ + + Sbjct: 98 VIVSGGFAEAGNAELEAEVARVAGVYGVRVLGPNCVGVYNAEVGLDTMFLPEEKAARPAG 157 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G + +S+SG + + + EG+G AV +G G ++L L + + Sbjct: 158 GPIAFISQSGAVMTAILDWAAAEGIGIGLAVNVGNRADIGE--GEILGLLRRLDYVKVAA 215 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAE 269 + E E +FL+ + R KP++ + AG+ A R H A+ G E Sbjct: 216 LYIEGFRR-RREVEEFLRSAKEFSRDKPVLVYKAGRGADSARAAKSHTAALA----GNYE 270 Query: 270 DKINAMKEAGICIAPSPARIGRSLVELLGSL 300 ++AG A + + + L L Sbjct: 271 YYKALFRQAGAIEAEDLLDLFD-MAQALALL 300 >gi|325526607|gb|EGD04152.1| CoA-binding domain protein [Burkholderia sp. TJI49] Length = 680 Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 90/250 (36%), Gaps = 20/250 (8%) Query: 50 TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 +P + ++ + E + ++I VP A+ ++I + +V +T G +D Sbjct: 37 GAEVQGLPAYASILDVPEVP--DQAIIVVPTGSVESALHDAIRKGVRSVVVLTAGFAEID 94 Query: 110 ------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP----GSIFRKGSVGILSRS 159 R+ A + + R+IGPN G+L +S G + G++ + ++S Sbjct: 95 AQGRAAQERMAALCKAAGVRMIGPNSLGLLNVESRLFSTFSVVLYGVRPQAGNIALATQS 154 Query: 160 GTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSA 219 G + G+G S V G + + + ++ D T I+ E Sbjct: 155 GAFGSALYGAATLRGMGFSKIVATGNEA--DVDVAEAIDYLAGDPGTRVIMAALESAKDG 212 Query: 220 EEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 + LK + KP++ G++A ++G + E G Sbjct: 213 RKLRRALLKAAHAQ---KPVIIMKVGRSALGAAAAATHTGSLAGNDAAYDAV---FAECG 266 Query: 280 ICIAPSPARI 289 A S + Sbjct: 267 AYRARSQEEM 276 >gi|239905816|ref|YP_002952555.1| CoA-binding domain protein [Desulfovibrio magneticus RS-1] gi|239795680|dbj|BAH74669.1| CoA-binding domain protein [Desulfovibrio magneticus RS-1] Length = 899 Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 89/256 (34%), Gaps = 33/256 (12%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----- 109 V + +V + +VI P + + E + V + G L+ Sbjct: 56 GVTCYRSVETLP--LTPDLAVICTGPESVPETLRELGRRGVGAAVALPPGYAKLEPAAKR 113 Query: 110 --MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 R+ S R++GP+ G+L P + R G + +S+S +L + Sbjct: 114 DLQQRMIEAAAPSGIRILGPSGMGLLVPGIGLNCSLANRDARPGRMAFISQSASLFTAVL 173 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 +G+G S + +G ++ D+L+ +D T SI++ E +A F+ Sbjct: 174 DWAHTKGVGFSHILSLGDR--VDLKYADILDYMASDPNTRSILLYVESVT----DARSFM 227 Query: 228 KDEAKRGRKKPIVGFVAGKT----APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 R KP++ G+ PPG +G E A + AG+ Sbjct: 228 SASRAAARNKPLLVVKPGRKLWTLFPPG-----------PDEGRDEVYDEAFRRAGMLRV 276 Query: 284 ---PSPARIGRSLVEL 296 + +L Sbjct: 277 GEIDTLFDAAETLARA 292 >gi|323492912|ref|ZP_08098053.1| hypothetical protein VIBR0546_04087 [Vibrio brasiliensis LMG 20546] gi|323312847|gb|EGA65970.1| hypothetical protein VIBR0546_04087 [Vibrio brasiliensis LMG 20546] Length = 894 Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 95/265 (35%), Gaps = 24/265 (9%) Query: 46 STYWTGGNVNVPVFTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLI 98 + P +++V + + +++ + + ++ + Sbjct: 36 GGFEGAIMPVTPKYSSVCGVLAYPSIENLPIVPDVAILCTHAKYNQRLFEQLADKQVKTV 95 Query: 99 VCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 + ++ + ++S R++GPN G++ P + +KG Sbjct: 96 IVLSADMHFANDEGQSIQDACLDIAKQSGMRILGPNTLGLILPWANFNASFSPVTAKKGK 155 Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMV 212 + +S+S + + + + +G S + +G +F +L+ D TE+I++ Sbjct: 156 IAFISQSAAMCTTILDWANDKNIGFSAFISLGNA--LDIDFASLLDHLSTDSHTEAILLY 213 Query: 213 GEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE-DK 271 + ++A +F+ R + I+ G+T+ A +GG + Sbjct: 214 VDTI----KDARRFMSAARAASRNRRILVLKGGRTSAG----RIAARAHTGGDDTLDIIY 265 Query: 272 INAMKEAGICIAPSPARIGRSLVEL 296 +A++ G+ + + ++ L Sbjct: 266 DSAIRRTGMLRVNNSHELFAAVETL 290 >gi|291296859|ref|YP_003508257.1| GCN5-related N-acetyltransferase [Meiothermus ruber DSM 1279] gi|290471818|gb|ADD29237.1| GCN5-related N-acetyltransferase [Meiothermus ruber DSM 1279] Length = 771 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 96/265 (36%), Gaps = 41/265 (15%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPV------FTTVAEAKERTAANASVIYVPPSGAGDAI 87 + G ++P T T VPV +T+V + ++I P +A Sbjct: 234 NRFQGPVYPVN--TAATPAAGEVPVVGSMLAYTSVKAVP--GPIDLAIITTPRDKVLEAA 289 Query: 88 IESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS--CKIGIMPG 145 + + ++ IT + + + RL+GP +++ S + Sbjct: 290 EACGQRGVRALMVITTDMEERQIKALAQTCRHYGMRLLGPGSLALMSTSSEVQLCAGLAP 349 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 + +G + + S+SG + + + G+G S V +G + D+++ + D Sbjct: 350 RLPLQGRIAMSSQSGAVGLAVLEYAREMGMGFSNFVSLGAKVDISSN--DLIQYWEEDPE 407 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK 265 T I++ E G+ +F + + GRKKPI+ G+ Sbjct: 408 TGLILLYVESFGNP----RRFARLARRVGRKKPILAVRPGR------------------- 444 Query: 266 GGAEDKINA-MKEAGICIAPSPARI 289 + + A K+ G+ A + + Sbjct: 445 ---DPVVEALFKQTGVVRAENLEEM 466 >gi|308177797|ref|YP_003917203.1| GNAT family acetyltransferase [Arthrobacter arilaitensis Re117] gi|307745260|emb|CBT76232.1| putative GNAT-family acetyltransferase [Arthrobacter arilaitensis Re117] Length = 886 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 101/284 (35%), Gaps = 36/284 (12%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIH---PKKGSTYWTGGNVNVPVFTTVAEAKERTAANAS 74 GK G EQ I T V ++ + G G +P + + Sbjct: 217 GKLGHDVLEQIIEAGYTGAVYAVNDAALEVGGMVAYGKVTEIP-----------GPVDVA 265 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGPNCP 130 + +P DAI + + +V +T G + + + L + R++GP Sbjct: 266 FLCIPRDRVNDAIKDCAAHGVKSLVVMTSGYETSEGLSAQRELVSLARANGMRVVGPGSA 325 Query: 131 GILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 G++ P I + G+VG ++S + Q+G+G S+A+ G Sbjct: 326 GLINTDPQVKLHATGSQHIPKAGNVGFFTQSAAMGTVIQGVALQQGVGTSSAISAGLRA- 384 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA---G 245 D ++ F D T + + E G+ +F + + R KP++ G Sbjct: 385 -DVSGNDAMQFFEDDPRTHVVALYLESFGNP----RKFARIARRLARSKPVIVAKTDVMG 439 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + PPG ++ G+ ++++G+ S + Sbjct: 440 RRLPPGHSVR-------VGQAAPGAMNAILRQSGVIRVRSSEEL 476 >gi|258652655|ref|YP_003201811.1| GCN5-related N-acetyltransferase [Nakamurella multipartita DSM 44233] gi|258555880|gb|ACV78822.1| GCN5-related N-acetyltransferase [Nakamurella multipartita DSM 44233] Length = 926 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 87/229 (37%), Gaps = 19/229 (8%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL------DMVRVKARLEKSSSR 123 + +++ +P +G D + +V +T G + A + R Sbjct: 288 GIDLAIVAIPAAGVLDVVRGCGARHTRAMVILTAGFGEAGAAGRSRQDEILAAARQDGMR 347 Query: 124 LIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 L+GPNC G++ D G +G++S+SG L + + G G + V Sbjct: 348 LVGPNCLGLINTDPAVRLNATFTDLPVPAGPLGLVSQSGALGIGVLDAAGRAGPGVAQFV 407 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 IG + D+L + ++ + + E G+ A + + +KP++ Sbjct: 408 SIGNRADVSSN--DLLAAWADEDRIRVVALYLESVGNPRTFA----RVARRVADRKPVIA 461 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 +G++A AG + + I+A ++AG+ + ++ Sbjct: 462 IKSGRSAAG----RRAGRSHTAAAATGDVVIDALFRQAGVLRVDTMEQM 506 >gi|307298663|ref|ZP_07578466.1| FdrA family protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306915828|gb|EFN46212.1| FdrA family protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 510 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 97/220 (44%), Gaps = 22/220 (10%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC 129 AN ++I +P A +++++ + ++ ++ + D +++K +++ ++GP+C Sbjct: 113 DANLALISLPGRFAAAEAMKALKNGLN-VMLYSDNVATEDEIKLKHYADRNDLIVMGPDC 171 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 + G+ ++ +G VGI++ SGT E + Q S+ G+G +G GG VK Sbjct: 172 GTAVINGK---GLGFSNVCPEGPVGIVAASGTGLQEVMVQLSRRGIGVKHGIGTGGRDVK 228 Query: 190 ----GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 G F+ + D I+ VG+ E + + + K+ K ++ F+ Sbjct: 229 ECVGGISFLKGIRELSDDPEISLIIAVGKPPDP---EVKERILNSLKKTGKDCVICFMGD 285 Query: 246 KTAPPGRTMGHAG----------AVISGGK-GGAEDKINA 274 + ++ A+++G + A DK+ A Sbjct: 286 DCGKDEDRVHYSAELEECAVVAEAILNGKEVSAARDKLRA 325 >gi|296158562|ref|ZP_06841392.1| GCN5-related N-acetyltransferase [Burkholderia sp. Ch1-1] gi|295891130|gb|EFG70918.1| GCN5-related N-acetyltransferase [Burkholderia sp. Ch1-1] Length = 809 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 61/318 (19%), Positives = 108/318 (33%), Gaps = 55/318 (17%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPK---KGSTYWTGGNVNVPVFTTVAEAKERTAANAS 74 G G + + + ++PK G G ++P TV + Sbjct: 25 GSTGAMVWTRVLDGGFEGPLWPVNPKYPTLGGHAVIGETGDLPEAPTV-----------A 73 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL---EKSSSRLIGPNCPG 131 VI PP+ I + + + E D + ++ L + R++GP G Sbjct: 74 VICTPPATWPGIIHKLGGLGTRAAIIVGEVRSDDDRLALRHALSAARPNLLRIVGPGSLG 133 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 +++P P + G V +S+S LT + GLG S AV +G + Sbjct: 134 VVSPALHAHLGAPSCTVKAGGVAWVSQSNALTNAVLGWAQARGLGFSHAVALGAEA--DV 191 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP-- 249 + DVL+ +D T +I++ + + A +F+ R KP++ +G+ P Sbjct: 192 DAGDVLDYLASDPGTRAILLELDSVRA----ARKFMSAARAAARNKPVLALRSGRADPAD 247 Query: 250 ------------------------------PGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 G +I+ G A +A AG Sbjct: 248 ALYTAAFRRAGMVRVDSLDDLLDEIETLGVGRVAAGATATLITSDSGLATLACDAFAAAG 307 Query: 280 ICIAPSPARIGRSLVELL 297 +AP P +L + L Sbjct: 308 DTLAPWPDEASEALRQAL 325 >gi|91777170|ref|YP_552378.1| GNAT family acetyltransferase [Burkholderia xenovorans LB400] gi|91689830|gb|ABE33028.1| Putative acetyltransferase, GNAT family [Burkholderia xenovorans LB400] Length = 809 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 61/318 (19%), Positives = 108/318 (33%), Gaps = 55/318 (17%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPK---KGSTYWTGGNVNVPVFTTVAEAKERTAANAS 74 G G + + + ++PK G G ++P TV + Sbjct: 25 GSTGAMVWTRVLEGGFEGPLWPVNPKYSTLGGHAVIGETGDLPEAPTV-----------A 73 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL---EKSSSRLIGPNCPG 131 VI PP+ I + + + E D + ++ L + R++GP G Sbjct: 74 VICTPPATWPGIIHKLGGLGTRAAIIVGEVRSDDDRLALRHALSAARPNLLRIVGPGSLG 133 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 +++P P + G V +S+S LT + GLG S AV +G + Sbjct: 134 VVSPALHAHLGAPSCTVKAGGVAWVSQSNALTNAVLGWAQARGLGFSHAVALGAEA--DV 191 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP-- 249 + DVL+ +D T +I++ + + A +F+ R KP++ +G+ P Sbjct: 192 DAGDVLDYLASDPGTRAILLELDSVRA----ARKFMSAARAAARNKPVLALRSGRADPAD 247 Query: 250 ------------------------------PGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 G +I+ G A +A AG Sbjct: 248 ALYTAAFRRAGMVRVDSLDDLLDEIETLGVGRVAAGATATLITSDSGLATLACDAFAAAG 307 Query: 280 ICIAPSPARIGRSLVELL 297 +AP P +L + L Sbjct: 308 DTLAPWPDEASEALRQAL 325 >gi|220924506|ref|YP_002499808.1| CoA-binding domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219949113|gb|ACL59505.1| CoA-binding domain protein [Methylobacterium nodulans ORS 2060] Length = 907 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 105/288 (36%), Gaps = 21/288 (7%) Query: 15 GLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANAS 74 G + + GTF + G I P ++P +V E E A+ Sbjct: 19 GASARPGTFGAAILRNLREAGFPGAIWPVNP---HHAQIGDLPCLPSVTELPE--PADLV 73 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK---SSSRLIGPNCPG 131 V+ P + + V +T G+ + +A RL+GP C G Sbjct: 74 VVVSPAETVPGVVAAAGARGCGAAVIVTAGLGAGEGSAAEAARRAARAHGLRLLGPECIG 133 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 + P + + + KG + ++++S T+ G G S V +G Sbjct: 134 LAIPAARLNASLLAHMPPKGDLALIAKSRTVAAGIAEWAVGRGYGFSGVVSLG--LALDV 191 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP- 250 + D L+ F AD T +I++ E A ++A +F+ R KP+V +G+ Sbjct: 192 DIADCLDHFAADRGTRAILLHLE----AVKDAPKFMSAARAAARAKPVVVLRSGRHETCR 247 Query: 251 --GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GR + H+G + A + AG+ + + ++ L Sbjct: 248 ADGRPVTHSGTLAKPDA----VYDAAFRRAGLLRVTALQEMFSAVETL 291 >gi|83589248|ref|YP_429257.1| CoA-binding [Moorella thermoacetica ATCC 39073] gi|83572162|gb|ABC18714.1| CoA-binding protein [Moorella thermoacetica ATCC 39073] Length = 707 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 101/267 (37%), Gaps = 28/267 (10%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE-IPL 97 ++P+ T G + P V+ E VI +P G + + ++ E + Sbjct: 46 PVNPR--ETKVLGLDC-YPSLKDVSGYVE-----LVVIAIPAPGVPEVMRQAAERGDVKG 97 Query: 98 IVCITEG-----IPVLDMVRV--KARLEKSSSRLIGPNCPGILTPDSCKIGIM-PGSIFR 149 + ++ G IP + A + R+IGPNC G++ ++ PG Sbjct: 98 AIIVSAGFAETAIPERVKLEKEVVAIARSAGIRVIGPNCNGVINTENRLSTSFAPGLQMI 157 Query: 150 KGSVGILSRSGTLTYEAVFQTSQ--EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 G++G ++SG + T+ + LG S +G + +++LE + +D + + Sbjct: 158 PGNIGFFTQSGATGGSILMLTAAQPKPLGFSKWAHVGN--MCDVTNLEILEYYASDPSVK 215 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 I E + + ++ K RKKP++ G+T R ++G Sbjct: 216 VIAGYME----GVRDGRELMRLAEKITRKKPLLVLKVGRTEVGSRATLSHTGTLAGSDKI 271 Query: 268 AEDKINAMKEAGICIAPSPARIGRSLV 294 + A ++GI + S Sbjct: 272 YD---AAFTQSGIVRVDKLEELVDSAK 295 Score = 37.3 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 21/109 (19%) Query: 192 EFIDVLELFLADEATESIVMVGEIGG-SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 E + L L L D ++++++G E AQ + AK+ K +V F+ GK Sbjct: 371 EHAEALRLVLEDPNVDAVLLIGLPPTFLPAERVAQAIAAVAKKYDKPVLVCFMTGKAMED 430 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 GR ++E GI +P R R+L+ L+ + Sbjct: 431 GRRY--------------------LEERGIPTFDTPDRAARALINLIKA 459 >gi|269217093|ref|ZP_06160947.1| protein FdrA [Slackia exigua ATCC 700122] gi|269129230|gb|EEZ60315.1| protein FdrA [Slackia exigua ATCC 700122] Length = 488 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 12/194 (6%) Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 T+ A E AN +VI VP A +++E + ++ ++ + + D + +K Sbjct: 85 RTLTRAAEDVDANIAVISVPGIYAAAEARKALEKGLH-VLMFSDNVSLDDEIALKDLAHG 143 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + + ++GS+GI+S SGT EA G+G S Sbjct: 144 KGLLMMGPDCGTCAFQG---VAFCFANAVQRGSIGIVSASGTGAQEAAVLLDSWGMGVSQ 200 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 +G GG V G F+D + ADE T I+++ + E A+ ++D A R Sbjct: 201 IIGTGGRDLSIEVGGRMFLDAFDALEADEGTSHILLISKP---PHETVARKVRDRAARS- 256 Query: 236 KKPIVGFVAGKTAP 249 KP+V G A Sbjct: 257 TKPVVACFLGDVAE 270 >gi|260777628|ref|ZP_05886521.1| protein acetyltransferase [Vibrio coralliilyticus ATCC BAA-450] gi|260605641|gb|EEX31926.1| protein acetyltransferase [Vibrio coralliilyticus ATCC BAA-450] Length = 899 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 44/296 (14%), Positives = 107/296 (36%), Gaps = 43/296 (14%) Query: 17 TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA------ 70 T +AG + + + + P+ +++V Sbjct: 22 TMRAGNIVMKNLLQGGFEGAIMPVTPR---------------YSSVCGVLAYKDIASLPI 66 Query: 71 -ANASVIYVPPSGAGDAIIESIEAEIPLIVCIT--------EGIPVLDMVRVKARLEKSS 121 + +++ S + + + + ++ ++ EGI + D ++S Sbjct: 67 TPDVAILCTNASRNLELFKQLADKRVKTVIVLSADMHLATDEGISIQDA--CLTIAQQSG 124 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 R++GPN GI+ P ++G + +S+S + + + + +G S + Sbjct: 125 IRILGPNSLGIILPWLNFNASFSPVTAQQGKIAFISQSAAMCTTILDWANDKNIGFSAFI 184 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G +F D+L+ D TE+I++ + ++A +F+ R + I+ Sbjct: 185 SLGNA--SDIDFADLLDYLSTDSHTEAILLYVDTI----KDARRFMSAARAASRNRRILV 238 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 GKT+ A +GG + +A++ G+ + + ++ L Sbjct: 239 LKGGKTSAG----RLAAQAHTGGDDTLDIIYDSAIRRTGMLRVNNSHELFAAVETL 290 >gi|33600561|ref|NP_888121.1| hypothetical protein BB1576 [Bordetella bronchiseptica RB50] gi|33568160|emb|CAE32073.1| Conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 498 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 60/265 (22%), Positives = 104/265 (39%), Gaps = 23/265 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P S G +PVF ++ E + + + I S ++ Sbjct: 41 YAGPIYPVHPS---AGEIEGLPVFASLEALPE--TVDYAYVATAAERVPGVIR-SGRGKV 94 Query: 96 PLIVCITEGIPVLD-----MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + ++ G + A ++ R++GPNC G+ +P + ++ Sbjct: 95 RVAQVMSSGFGETQEGDALQRDLLAAARDANVRVVGPNCLGVYSPRA-RVSFTRRVTDEA 153 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G VG++ +SG L + + + Q GL S V IG ++LE FLADE T I Sbjct: 154 GHVGVVCQSGGLGTDIIRRGQQRGLRFSGLVTIGNA--VDVSASELLEYFLADEQTRVIG 211 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 M E + + + + G +KP+V G TA A + +G G+E Sbjct: 212 MYLESA----RDGRRLFEVLRQAGCRKPVVLLKGGGTA----QGRRAASSHTGALAGSEQ 263 Query: 271 KINAM-KEAGICIAPSPARIGRSLV 294 A+ K+ G+ I + L+ Sbjct: 264 AWAALGKQTGMPIVDTLDEFLDVLL 288 >gi|327439812|dbj|BAK16177.1| acyl-CoA synthetase [Solibacillus silvestris StLB046] Length = 721 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 93/268 (34%), Gaps = 28/268 (10%) Query: 35 QVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE 94 + G I+P G + P T V + + + V + +I E + Sbjct: 44 KFQGEIYPIHPKAEQIAGLKSYPSLTDVPNS-----IDLVIFCVAYDQIKNGLIACAEKK 98 Query: 95 IPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCKIGIMPG--- 145 + + G K + ++ RL+GPNC G++ + IG Sbjct: 99 VKAAIIFASGFSEAGEEGKKLQLELAEYAKLNNIRLLGPNCVGLVNTSNGLIGTFSSSVL 158 Query: 146 --SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLAD 203 + K VG +S+SG +Q G+ + + G + T D ++ + D Sbjct: 159 DVPMSGKRGVGYVSQSGAFGVLTYMAAAQYGINFNYFISSGNE--MDTTMEDYIDYMVHD 216 Query: 204 EATESIVMVGEIGGSAEEEAAQFLKDEAKRG--RKKPIVGFVAGKTAPPGRTMGHAGAVI 261 + E I E + E+ LK A++ +KKPIV G++ R + Sbjct: 217 DEIEVISGYIEGAKNPEK-----LKQAARKALEKKKPIVLMKTGRSDAGSRAAASHTGAL 271 Query: 262 SGGKGGAEDKINAMKEAGICIAPSPARI 289 +G + ++ GI + Sbjct: 272 AGSDKIYD---AFFRQHGIIRVEDAEDV 296 >gi|261343575|ref|ZP_05971220.1| acetyltransferase, GNAT family [Providencia rustigianii DSM 4541] gi|282568725|gb|EFB74260.1| acetyltransferase, GNAT family [Providencia rustigianii DSM 4541] Length = 881 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 102/278 (36%), Gaps = 23/278 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +AG+ + + + ++P + + V + ++ + + + +VI Sbjct: 27 RAGSVMMKNLLSCGFKGPILPVNPNRN------SILGVLAYPSIEKLPLKP--DLAVICT 78 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 S + + + EA +++ ++ P + +K ++ RL+GPN G L P Sbjct: 79 HYSRNVECLRQLGEAGCNVVIILSS--PSIQFNELKKVAQQYQIRLLGPNSLGFLAPWQG 136 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 KG + +S+S ++ + +G S + +G + + L+ Sbjct: 137 LNASFSPIPILKGKLAFISQSAAVSNTVLDWARHRDIGFSYFIALGDSIDIDIDDL--LD 194 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E +A +FL R KPI+ +G+T A Sbjct: 195 YLARDSKTSAILLYLENIS----DARRFLSSSRSASRNKPILVIKSGRT-------RKAQ 243 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++ A++ AG+ + ++ L Sbjct: 244 ELLGEKPSLDAAYDAAIQRAGLLRVQDTHEMFSAVETL 281 >gi|157382706|gb|ABV48791.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA17] Length = 335 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 44/108 (40%) Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 F+D + F + + +V++GE+GG E A+ +KD K Sbjct: 1 FLDHMLRFEKNPQVKLMVLLGEVGGELEYRVAEAIKDGRITKPVIAWCIGTISKHFGGEV 60 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GHAGA + A+ K A++EAG + S + + + L Sbjct: 61 QFGHAGAKAGAERETADAKNEALREAGAYVPKSFNDLPELIRGVYEEL 108 >gi|309812876|ref|ZP_07706608.1| CoA binding domain protein [Dermacoccus sp. Ellin185] gi|308433154|gb|EFP57054.1| CoA binding domain protein [Dermacoccus sp. Ellin185] Length = 887 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 96/243 (39%), Gaps = 20/243 (8%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------L 108 +P +++ E + VI VP D + E A + ++ ++ G Sbjct: 249 GLPTVPSISAIGE--PIDLVVIAVPAPKVLDVVAECGGAGVRALLVVSAGFAESGPEGAE 306 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILTP--DSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 ++ A + R++GPN G++ D+ + + G +G+ ++SG L Sbjct: 307 RQAQLLALARRHGMRVVGPNSFGLINTREDTRLNASIAYEMPPAGHLGLFAQSGALGIAV 366 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + GLG S G D+++ ++ D+ T ++ + E G+ +F Sbjct: 367 LASAGRRGLGLSDFASAGNR--IDVSGNDLMQYWIDDDDTHAVGLYLESVGNP----RKF 420 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 + + +KP+V V + + GR GH + + ++++G+ + Sbjct: 421 TRIARQLALRKPVVV-VKSEVSAFGRPPGHR---VRETRTPPRAFREMLRQSGVIRVGNV 476 Query: 287 ARI 289 ++ Sbjct: 477 HQL 479 >gi|163854894|ref|YP_001629192.1| hypothetical protein Bpet0589 [Bordetella petrii DSM 12804] gi|163258622|emb|CAP40921.1| conserved Hypothetical protein [Bordetella petrii] Length = 824 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 92/242 (38%), Gaps = 28/242 (11%) Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-----PVLDMVRVKAR 116 A + + +++ V P+ + +E P + P + +A Sbjct: 54 CAGLADGQRPDLALVCVSPA-VLPETLRRLEPLRPRAAIVLPHELPDPYPGGTLALCRAW 112 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 EK+ L+GP G P + ++ R G V ++++S ++T + +G Sbjct: 113 AEKNGCELLGPRAFGAQRPHAGLNLSQHPTLARAGRVALVAQSRSITAAVMDWAEDVHIG 172 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 STAV +G + G VL+ +D T+SIV+ E G+ A +F+ Sbjct: 173 FSTAVSLGDEAAVG--MAQVLDFLASDPRTDSIVLYLEDVGT----AREFMSTLRAAASV 226 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ AG+ P G A++ AG ++ ++ ++ Sbjct: 227 KPVIVLKAGRDGPAG---------------SDAVLDAALRRAGAVRVRYFVQLFSAV-KV 270 Query: 297 LG 298 LG Sbjct: 271 LG 272 >gi|158521259|ref|YP_001529129.1| CoA-binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158510085|gb|ABW67052.1| CoA-binding domain protein [Desulfococcus oleovorans Hxd3] Length = 753 Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 90/238 (37%), Gaps = 19/238 (7%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK---- 114 + TV+ + +V+ +P + D I + + ++ I+ G K Sbjct: 324 YPTVSAIP--GDVDLAVVTIPAAKVLDLIPDLETKGVKHMLLISSGFGETGEEGKKLEAR 381 Query: 115 --ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 R + ++GPN GI P G + ++S+SG + + + Q Sbjct: 382 VVERARAADILMVGPNTMGIANPHIKLYCTGTHVWPDPGGIAMVSQSGNMGGQLLQFAEQ 441 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 +G+ G G + + D L F DE +E +++ E ++ +FL+ + Sbjct: 442 QGIEIRAFSGSGNEAM--VTIEDYLHAFEVDELSEIVMLYIESV----KDGRRFLEYARR 495 Query: 233 RGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KKPIV G+T + H GA+ S A +++GI P + Sbjct: 496 LSMKKPIVLLKGGQTKVGEKAAASHTGAMAS----DARVFDAVCRQSGIVKVDQPMDM 549 >gi|303257788|ref|ZP_07343798.1| acetyltransferase, GNAT family [Burkholderiales bacterium 1_1_47] gi|302859391|gb|EFL82472.1| acetyltransferase, GNAT family [Burkholderiales bacterium 1_1_47] Length = 711 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 109/293 (37%), Gaps = 28/293 (9%) Query: 13 VQGLTGKA---GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT 69 V G + K G+ ++ + Y T + I+PK + + +V E E Sbjct: 15 VIGASNKEHTIGSDIMKRLVEYGFTGKIFPINPK------DSEIQGMTAYPSVLEVPEE- 67 Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSR 123 + +VI + A+ + + I IV I+ G ++ ++ + Sbjct: 68 -IDMAVIVINAKYVLSAVDQCHQKGIKGIVVISAGFKETGGAGAELEAKLVNKVREYGMT 126 Query: 124 LIGPNCPGILTPDSCK--IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +GPNC G++ D S+ +G +G +S+SG L + LG + + Sbjct: 127 CVGPNCLGVVNTDPKFRLDACFAESLPVRGDIGFVSQSGALGGGILNILQDLNLGFAQFI 186 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 IG +E + + + I++ E + +F ++ +KKPI+ Sbjct: 187 SIGNQA--DVNADSAIEYWENVDDVKQILLYMESIA----DPKRFRALASRTTKKKPIIA 240 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 AG++A ++G A+ +K++G+ S + + Sbjct: 241 LKAGRSAAGASAASSHTGSLAGADKAADAL---LKQSGVIREFSLQDLFNTAK 290 >gi|78060987|ref|YP_370895.1| GCN5-related N-acetyltransferase [Burkholderia sp. 383] gi|77968872|gb|ABB10251.1| GCN5-related N-acetyltransferase [Burkholderia sp. 383] Length = 785 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 101/289 (34%), Gaps = 31/289 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + +AG+ G + P G+ V V Sbjct: 15 VAVVGASSRAGSIGAMVWSRVLDGAFEGPVWPVNPKYRDLHGHA---VVADVDRLPA--P 69 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV---RVKARLEKSSSRLIGP 127 + +VI PP+ + + E + + + E D R + R++GP Sbjct: 70 PSVAVICTPPATWAGIVRKLGELGTRVAIIVGEARTDADRAALDRTLKAAKPFVLRIVGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G+L+P P R G V +S+S LT + GLG S V +GG+ Sbjct: 130 GSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWADARGLGFSHVVALGGE- 188 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + DVL+ +D T +I++ + + A +F+ R KP++ G+ Sbjct: 189 -SDVDAGDVLDYLASDPGTRAILLELDTVRA----ARKFMSAARAAARNKPVLALRTGR- 242 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A PG + A A + AG+ + + + L Sbjct: 243 ADPGDALYTA----------------AFQRAGMVRVDALDDLLDEIETL 275 >gi|171318044|ref|ZP_02907215.1| CoA-binding domain protein [Burkholderia ambifaria MEX-5] gi|171096778|gb|EDT41656.1| CoA-binding domain protein [Burkholderia ambifaria MEX-5] Length = 730 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 67/281 (23%), Positives = 109/281 (38%), Gaps = 27/281 (9%) Query: 17 TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVI 76 T K G F + Q +L G I+P + +P F +V + + +++ Sbjct: 24 TTKRG-FRSIQKLLEDG--FAGTIYPVNPK---EDEILGLPCFKSVEDIP--GDFDLALV 75 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR------VKARLEKSSSRLIGPNCP 130 P I + V + G + + R+IGPN Sbjct: 76 CTPAKTLPGVIEQCGRKNAKGAVVLAGGFAEAGAEGAALQQAMVQAARRHGVRIIGPNTS 135 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG-LGQSTAVGIGGDPVK 189 GI + ++ S RKG++G+LS+SG + V + G +G ST VGIG + Sbjct: 136 GIFNTH-NQCNVVGFSQLRKGAIGLLSQSGNMALSLVTEAQANGEVGLSTYVGIGNE--S 192 Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT-A 248 F + L+ F DE T ++ E ++ FLK RKKP+V + +G+T A Sbjct: 193 DIRFDEYLDYFADDENTSVVIAYVE----GMKDGPAFLKALRDITRKKPVVLYKSGRTGA 248 Query: 249 PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 H GA+ G +++AG +A I Sbjct: 249 GISSAKSHTGALA----GDYAVSQGVLRQAGAVLATKSDEI 285 >gi|84502077|ref|ZP_01000235.1| CoA-binding [Oceanicola batsensis HTCC2597] gi|84390072|gb|EAQ02706.1| CoA-binding [Oceanicola batsensis HTCC2597] Length = 727 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 63/270 (23%), Positives = 105/270 (38%), Gaps = 28/270 (10%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 I+PK+ + + VAE E + + I +P DA ++I A + Sbjct: 62 MINPKR------DEIFGLKAWDNVAELAEAP--DVTAINLPGEMVLDAARDAIAAGTKAL 113 Query: 99 VCITEGIPVL------DMVRVKARLEKSSSRLIGPNCPGILT-PDSCKIGIMPGSIFRKG 151 + + G +KA ++ +GPNC GI++ + +G Sbjct: 114 MIHSGGFGERGADGEAREAELKALCAEAGVAALGPNCLGIMSLTRKASVSSFKAGKLGQG 173 Query: 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 + ++S+SG++ + G S G + V T D++ + D T IV Sbjct: 174 PLALISQSGSVASILMQIAQP--FGASLVASTGNEAV--TTAEDLMHHAIEDPDTRIIVG 229 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG-RTMGHAGAVISGGKGGAED 270 E E+ K A KPI+ AG TA G + GH GA+ G E Sbjct: 230 FVEALRRPEQLFGLAWKARAAG---KPIILLKAGLTAKGGEVSRGHTGALA----GSGEV 282 Query: 271 KINAMKEAGICIAPSPARIGRSLVELLGSL 300 A+ +AGI +A + + +VEL +L Sbjct: 283 YRQALAQAGIVMAEDFEELAQ-MVELFATL 311 >gi|315171539|gb|EFU15556.1| putative membrane protein FdrA [Enterococcus faecalis TX1342] Length = 515 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + IG+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---IGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ +ADE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|157382778|gb|ABV48826.1| ATP citrate lyase alpha subunit [Lebetimonas acidiphila] Length = 335 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 6/117 (5%) Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 G+ FID L + + ++++GE+GG E + + +K+ KP++G+ G Sbjct: 1 RFVGSVFIDHLLRMEKNPQVKYMILLGEVGGREEYKVIEAIKEGKI---TKPVIGWCIGT 57 Query: 247 TAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 A G GHAGA + AE K AMKEAGI + + + + + L Sbjct: 58 IAKYFSSGVQFGHAGASANAQAETAEAKNRAMKEAGIHVPDNFNDLPLVIKGVYEEL 114 >gi|115755966|ref|XP_001200828.1| PREDICTED: similar to ATP-citrate synthase, partial [Strongylocentrotus purpuratus] gi|115933715|ref|XP_792914.2| PREDICTED: similar to ATP-citrate synthase, partial [Strongylocentrotus purpuratus] Length = 288 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 46/113 (40%) Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 GT F+D + + D + +VM+GE+GG+ E E ++ Sbjct: 1 YPGTTFLDHILRYHDDPEVKMLVMLGEVGGTEEYEVCSAIESGRITKPMVAWCIGTCSTM 60 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GHAGA +G + + K A++ AG + S +G + E+ L Sbjct: 61 FTSEVQFGHAGACANGERETSSAKNQALRVAGAYVPGSFDDLGDKIAEIFQGL 113 >gi|241649963|ref|XP_002411231.1| ATP-citrate synthase, putative [Ixodes scapularis] gi|215503861|gb|EEC13355.1| ATP-citrate synthase, putative [Ixodes scapularis] Length = 489 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 63/209 (30%), Gaps = 34/209 (16%) Query: 4 LVDKNTKVLVQGLTGK--AGTFHTEQAILYCQTQVVGGIHPK----KGSTYWTGGNVNVP 57 TK ++ G+ + + + VV ++P K YW V +P Sbjct: 29 WFTPKTKAIIWGMQTRAVQSMLDFDFVCSRKEGSVVAMVYPFTGDHKQKFYWGHKEVLIP 88 Query: 58 VFT-------------------TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 F +V + S I S I+ +P Sbjct: 89 EFKENLHLYSLSVMRSWKMGLFSVQSVAQSVQTLTSFICFF-SMPSAKILVKSRQLVPDC 147 Query: 99 VCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSR 158 C+ I + I P C I I+ ++R G+V +SR Sbjct: 148 FCVASVIAETSVAVQ--------VGGIKPGCFKIGNTGGMMDNILASKLYRPGNVAYVSR 199 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 SG ++ E S+ G V IGGD Sbjct: 200 SGGMSNELNNIISRSTNGVYEGVAIGGDR 228 >gi|221210376|ref|ZP_03583356.1| acetyltransferase, gnat family [Burkholderia multivorans CGD1] gi|221169332|gb|EEE01799.1| acetyltransferase, gnat family [Burkholderia multivorans CGD1] Length = 784 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 57/289 (19%), Positives = 102/289 (35%), Gaps = 31/289 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + +AG+ G + P G+ VP V Sbjct: 15 VAVVGASSRAGSIGAMVWSRVLDGAFDGPVWPVNPKHRELDGHAVVP---DVDRLPA--P 69 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS---SRLIGP 127 + +VI P+ + + E + + + + D + L+ + R++GP Sbjct: 70 PSVAVICTRPATWAGIVRKLGEQGTRVAIIVGDARSDADRAALDRALKAAKPFVLRIVGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G+L+P P R G V +S+S LT + + GLG S V +GG+ Sbjct: 130 GSLGVLSPARHAHFGAPAYTVRSGGVAWVSQSNALTNAVLGWANARGLGFSHVVALGGEA 189 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + DVL+ +D T +I++ + + A +F+ R KP++ G+ Sbjct: 190 --DVDAGDVLDYLASDPGTRAILLELDSVRA----ARKFMSAARAAARNKPVLALRTGRA 243 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 P G A A + AG+ + + + L Sbjct: 244 DPG------------DGLYTA-----AFQRAGMVRVDALDDLLDEIETL 275 >gi|317402575|gb|EFV83137.1| hypothetical protein HMPREF0005_02249 [Achromobacter xylosoxidans C54] Length = 818 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 97/265 (36%), Gaps = 36/265 (13%) Query: 44 KGSTYW----TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 K T TG ++P ++ + +++ V P+ + + P V Sbjct: 39 KAKTTVVACETGAAPDLP--DSLQGLAAGERPDLALVCVSPA-VLPETLRRLSPLAPRSV 95 Query: 100 CITEGI-----PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 + P + +A E++ L+GP G P + + R G V Sbjct: 96 ILLPHELPDPYPRGTLALCRAWAEENRCELLGPRSFGAQRPHAGLNLSQHPVLARAGRVA 155 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 +L++S ++ + +G STAV +G + V G VL+ +D T+SIV+ E Sbjct: 156 LLAQSRSIMAAVMDWAEDVHIGFSTAVSLGDEAVVGLS--KVLDYLASDPRTDSIVLYLE 213 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-N 273 G A +F+ KP++ AG+ A+ Sbjct: 214 DVGP----AREFMSTLRAAASVKPVIVLKAGR----------------ADTDSADAIFDA 253 Query: 274 AMKEAGICIAPSPARIGRSLVELLG 298 A++ AG ++ ++ ++LG Sbjct: 254 ALRRAGAVRVRYFVQLFSAV-KVLG 277 >gi|153827354|ref|ZP_01980021.1| acyl-CoA synthetase [Vibrio cholerae MZO-2] gi|149738723|gb|EDM53065.1| acyl-CoA synthetase [Vibrio cholerae MZO-2] Length = 337 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 102/286 (35%), Gaps = 28/286 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G + Q V +P ++P+ +A + N S+ Sbjct: 26 GNIVMKNLLQGGFDGAIMPVTPYYPAVCGVLAYKTISDLPIVPDIAILCTHASRNVSLF- 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPG 131 + E + ++ ++ + + + + R++GPN G Sbjct: 85 ----------KQLAEKGVKQVIVLSSDMYSLDAQGEEIQAQCMTIAKSVNMRILGPNSLG 134 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G KG++ +S+S + + + +G+G S + +G Sbjct: 135 LILPWMQFNGSFSPVSALKGNIAFVSQSAAVCTTILDWANDKGIGFSAFISLGNA--SDI 192 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F D+L+ D+ T++I++ + +A +F+ R + I+ G+T Sbjct: 193 DFADLLDTLSTDKHTDAILLYVDTI----RDARRFMSAARAASRNRRILVLKGGRT---- 244 Query: 252 RTMGHAGAVISGGKGGAE-DKINAMKEAGICIAPSPARIGRSLVEL 296 + A + +GG + +A++ G+ + + ++ L Sbjct: 245 KAGRKAAQMHTGGDDTLDIIYDSAIRRTGMLRVNNTHELFAAVETL 290 >gi|269836565|ref|YP_003318793.1| CoA-binding domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269785828|gb|ACZ37971.1| CoA-binding domain protein [Sphaerobacter thermophilus DSM 20745] Length = 743 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 90/268 (33%), Gaps = 22/268 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P + + +P + ++ + +V+ VP + A + Sbjct: 58 FEGEVYPVNPNY---DEILGLPCYPSLEAIP--GGVDLAVVVVPSRLIPGVLESCERAGV 112 Query: 96 PLIVCITEGIPV--------LDMVRVKARLEKSSSRLIGPNCPG-ILTPDSCKIGIMPGS 146 + IT G ++ ++ R++GPNC G I P+ Sbjct: 113 GAVNIITSGFAEKQEDETGPERQRAIRDFARRTGIRVVGPNCLGNISVPNRMVASSGAYP 172 Query: 147 IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 +G + + +SG L Y V G+G + V +G + +D++ +L DE T Sbjct: 173 PLNRGPIALALQSGLLAYSLVLPAHDRGIGFTYVVTLGNEADIDV--VDMIRYYLDDEET 230 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKG 266 I E E E KPIV G++ R + G Sbjct: 231 RVIGCFVEQFRRLERLLE---MAERAADLGKPIVVLKVGRSEAGRRAALAHTGSLVGSDE 287 Query: 267 GAEDKINAMKEAGICIAPSPARIGRSLV 294 + M++ GI S + +L Sbjct: 288 IVDAV---MRQHGIIRVYSLDEMIETLA 312 >gi|28866843|dbj|BAC65219.1| putative succinyl-CoA synthase [Fusarium sp. IFO 7772] Length = 154 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 57/127 (44%), Positives = 80/127 (62%), Gaps = 6/127 (4%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ +D T+V+ QG TGK T + + I Y T+VVGG+ P KG N+ +PVF T Sbjct: 33 NLKLDAQTRVIYQGFTGKVATKNAQDTIEY-GTKVVGGVSPGKGGQ----QNLGLPVFNT 87 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE-KS 120 V EA + +ASV++VP A AIIE+IEAEIPL+V + E +PV DM+ V L +S Sbjct: 88 VREAVDEVNPSASVVFVPAHSAALAIIEAIEAEIPLVVSVAEFVPVRDMLLVHEVLRTQS 147 Query: 121 SSRLIGP 127 +RL+GP Sbjct: 148 KTRLVGP 154 >gi|189353992|ref|YP_001949619.1| hypothetical protein BMULJ_05245 [Burkholderia multivorans ATCC 17616] gi|189338014|dbj|BAG47083.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] Length = 785 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 57/289 (19%), Positives = 102/289 (35%), Gaps = 31/289 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + +AG+ G + P G+ VP V Sbjct: 15 VAVVGASSRAGSIGAMVWSRVLDGAFDGPVWPVNPKHRELDGHAVVP---DVDRLPA--P 69 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS---SRLIGP 127 + +VI P+ + + E + + + + D + L+ + R++GP Sbjct: 70 PSVAVICTRPATWAGIVRKLGELGTRVAIIVGDARSDADRAALDRALKAAKPFVLRIVGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G+L+P P R G V +S+S LT + + GLG S V +GG+ Sbjct: 130 GSLGVLSPARHAHFGAPAYTVRSGGVAWVSQSNALTNAVLGWANARGLGFSHVVALGGEA 189 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + DVL+ +D T +I++ + + A +F+ R KP++ G+ Sbjct: 190 --DVDAGDVLDYLASDPGTRAILLELDSVRA----ARKFMSAARAAARNKPVLALRTGRA 243 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 P G A A + AG+ + + + L Sbjct: 244 DPG------------DGLYTA-----AFQRAGMVRVDALDDLLDEIETL 275 >gi|73537662|ref|YP_298029.1| CoA-binding [Ralstonia eutropha JMP134] gi|72120999|gb|AAZ63185.1| CoA-binding [Ralstonia eutropha JMP134] Length = 700 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 93/266 (34%), Gaps = 26/266 (9%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P + +P + +VA+ E + ++I VP A A+ E Sbjct: 49 PVNPNR------STVQGLPTYASVADLPEVP--DVAIIAVPAQHALQAVKALAERGTKAA 100 Query: 99 VCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG----SIF 148 + T G + A + RL+GPN G++ + +G + Sbjct: 101 ILFTAGFAEVSEEGAAMQAEMVAIARRGGMRLLGPNTLGMVNMHNGFVGSFSTFSSLGVS 160 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 R G VGI+S+SG V + G+ S+ V G + D++ LF AD T+ Sbjct: 161 RPGRVGIVSQSGAYGSHLVSSAMEAGVYPSSIVMTGNEA--DLNVSDIVRLFAADPMTDV 218 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 I + E A KP+V G++ G A I+G Sbjct: 219 IAVYAEGISDGPGLVDALKAAHAAG---KPVVMMKVGRSEVGGAAARSHTASIAGDDAVV 275 Query: 269 EDKINAMKEAGICIAPSPARIGRSLV 294 ++ + G+ + + L Sbjct: 276 SAVLDEL---GVVRVRTTEEMLDILR 298 >gi|118474020|ref|YP_888358.1| CoA-binding protein [Mycobacterium smegmatis str. MC2 155] gi|118175307|gb|ABK76203.1| CoA-binding protein [Mycobacterium smegmatis str. MC2 155] Length = 687 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 86/234 (36%), Gaps = 18/234 (7%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRL 124 + I VP A+ +++ A IV +T G L RV R+ + + L Sbjct: 70 VDLVAITVPAHSFEAAVEDALAAGARAIVGVTAGFAELGPEGRALQDRVVDRVRSAGAVL 129 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GPNC G++ DS + G V +LS+SG + E G G S +G Sbjct: 130 LGPNCLGVI--DSTTNLTFASNPLPGGRVALLSQSGNMALEVSGFLQSRGHGFSRFASLG 187 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 G D+++ +A T+ I + E G + A KP++ Sbjct: 188 NQADLGV--ADLIDSCVAHNGTDLIALYCEDFGDGRSFVSAA---AAAAAANKPVLLLTV 242 Query: 245 GKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G + R H GA+ S A AGI SP ++ LL Sbjct: 243 GGSEASVRGAQSHTGALTSDSAVI----DAACHAAGIYRVTSPRQLADVAATLL 292 >gi|224371672|ref|YP_002605836.1| putative acyl-CoA synthetase [Desulfobacterium autotrophicum HRM2] gi|223694389|gb|ACN17672.1| putative acyl-CoA synthetase [Desulfobacterium autotrophicum HRM2] Length = 724 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 45/219 (20%), Positives = 86/219 (39%), Gaps = 17/219 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKARLEKSSSR 123 + +V+ +P + D I + I ++ IT G + + ++ Sbjct: 306 PVDLAVVTIPAARVLDLIPQFKAKGIKNMLLITSGFREIGESGLDLEKTLIKEASEAGIL 365 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 +IGPN G+ P + R GS ++ +SG + + + Q+ +G G Sbjct: 366 VIGPNTMGLCNPHIGLTCLPFPVTPRAGSTALVCQSGNMGLQFLAFAEQQCIGIRGFCGS 425 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G + + D L+ F D T +++ E + ++ +F + RKKPIV Sbjct: 426 GNEAM--VTIPDYLDAFEMDPLTRIVMLYIE----SIKDGRRFFDSALRVSRKKPIVLLK 479 Query: 244 AGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGIC 281 G++ + H GA+ S + A ++AGI Sbjct: 480 GGQSDAGRKAATSHTGAIASDSR----VFNAACRQAGIV 514 >gi|326384464|ref|ZP_08206144.1| CoA-binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326196809|gb|EGD54003.1| CoA-binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 913 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 92/265 (34%), Gaps = 21/265 (7%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 V G P + + + TV + + + +VI VP + + + Sbjct: 254 GAAVRAGHRPGRPERTPPPSVRGIRSYPTVRDIPD--PVDLAVIAVPAERIDQVLDDCLA 311 Query: 93 AEIPLIVCITEGIPVLDMV---RVKARLEK---SSSRLIGPNCPGILTPDS--CKIGIMP 144 + +V ++ G K E+ RL+GPN G++ + Sbjct: 312 KGVRALVVVSAGFGERGEAGLENEKRLAEQVRAHGMRLVGPNALGVVNNHHDIALNASLA 371 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 I G VG +SG L + + LG ST V G DVL+ + D+ Sbjct: 372 PRIPGPGRVGFFCQSGALGIAILDTAAHRQLGLSTFVSAGNRA--DVSGNDVLQYWDTDD 429 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 T+ +++ E G+ + + +KPIV +G A M A +G Sbjct: 430 DTDVVLLYLESFGNPRKFGR----IARRVASRKPIVAIKSGSGA-----MSPVHAQRTGP 480 Query: 265 KGGAEDKINAMKEAGICIAPSPARI 289 +++AG+ + A + Sbjct: 481 VQDDRVAQMVLEQAGVIQVETIAEL 505 >gi|315169216|gb|EFU13233.1| putative membrane protein FdrA [Enterococcus faecalis TX1341] Length = 519 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + IG+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---IGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ +ADE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|32170714|dbj|BAC78379.1| putative salicyl-CoA synthetase [Streptomyces sp. WA46] Length = 685 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 89/248 (35%), Gaps = 20/248 (8%) Query: 59 FTTVAEAKERTA--ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL--DMVRVK 114 F +V EA + V +P + DA+ E+ + G D + Sbjct: 55 FPSVGEAAAAHGITPDLVVSCIPAAVTADALREAAAVGARAALVCAGGFAEAGGDGALHQ 114 Query: 115 ARL----EKSSSRLIGPNCPGILTPDSCKIGIMPGSIF--RKGSVGILSRSGTLTYEAVF 168 L + R++GPN G L P +G V +++ SG + + F Sbjct: 115 HALAEVVRDTGIRVLGPNTSGFLAPHRRLTASFVPGAPDLERGPVAVVAASGGVNHALAF 174 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 ++ G+G VG+G DVL+ D+ ++ + E E + + Sbjct: 175 ALAEAGVGLRLGVGLGNS--LDVTQADVLDHLAEDDGVRAVALHVETAA----EGRRLTE 228 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + + P+V V G++ H GA+ + + A+++AG + Sbjct: 229 AVRRLTDRVPVVALVVGRSDIGDFARSHTGALATSWRVT----RTALRQAGAVLVDDERD 284 Query: 289 IGRSLVEL 296 + ++ L Sbjct: 285 LVDAVTAL 292 >gi|262274032|ref|ZP_06051844.1| protein acetyltransferase [Grimontia hollisae CIP 101886] gi|262221842|gb|EEY73155.1| protein acetyltransferase [Grimontia hollisae CIP 101886] Length = 893 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 97/254 (38%), Gaps = 23/254 (9%) Query: 57 PVFTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP--- 106 P + VA + +++ S + I + E + + + + G+ Sbjct: 47 PKYQAVAGILAYPTIEALPLVPDLAILCTHASRNSELIRQLGEKGVKMAIILAAGMKKTK 106 Query: 107 ----VLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTL 162 + ++ + + R+IGPN G++ P +G++ +S+S + Sbjct: 107 AEDGRSEFEVMREIASQYAMRVIGPNSLGLILPWLNLNASFSPIPANRGNIAFVSQSAAV 166 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 + +G ST + +G +F ++L+ + T++I++ + ++ Sbjct: 167 CTTILDWARNRRIGFSTFISLGEA--SDIDFPELLDYLSRESKTDAILLYIDNI----QD 220 Query: 223 AAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 A F+ R + ++ +G+T P G + + G GA D A++ +G+ Sbjct: 221 ARAFISAARAASRNRRVLVLKSGRT-PEGAAVLPHLQENAMGLDGAYD--AAIRRSGMLR 277 Query: 283 APSPARIGRSLVEL 296 + + ++ L Sbjct: 278 VKTTHELFAAVETL 291 >gi|212712920|ref|ZP_03321048.1| hypothetical protein PROVALCAL_04018 [Providencia alcalifaciens DSM 30120] gi|212684398|gb|EEB43926.1| hypothetical protein PROVALCAL_04018 [Providencia alcalifaciens DSM 30120] Length = 881 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 101/278 (36%), Gaps = 23/278 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +AG+ + + + ++P + + V + ++ + + + +VI Sbjct: 27 RAGSVMMKNLLSSGFKGPILPVNPNRN------SILGVLAYPSIDKLPLKP--DLAVICT 78 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 S + + + EA +++ ++ P + +K ++ RL+GPN G P Sbjct: 79 HYSRNTECLRQLGEAGCNVVIILSS--PSIQFNELKKVAQQYQIRLLGPNSLGFFAPWQG 136 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 KG + +S+S ++ + +G S + +G + + L+ Sbjct: 137 LNASFSPIPILKGKLAFISQSAAVSNTVLDWARHRDIGFSYFIALGDSIDIDIDDL--LD 194 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E +A +FL R KPI+ +G+T A Sbjct: 195 YLARDSKTSAILLYLENIS----DARRFLSSSRSASRNKPILVIKSGRT-------RKAQ 243 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++ A++ AG+ + ++ L Sbjct: 244 ELLGEKPSLDAAYDAAIQRAGLLRVQDTHEMFSAVETL 281 >gi|187479446|ref|YP_787471.1| acetyltransferase [Bordetella avium 197N] gi|115424033|emb|CAJ50586.1| putative acetyltransferase [Bordetella avium 197N] Length = 828 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 90/238 (37%), Gaps = 30/238 (12%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-----PVLDMVRVKARLEKSS 121 E + +++ V P+ + +E P + + P + + Sbjct: 59 EGERVDLALVCVSPA-VLPETLRRLERLAPRALILLPHELPDPYPRGTLALCEEWARAHH 117 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +L+GP G P + ++ R G V ++++S ++ + +G S AV Sbjct: 118 CQLLGPRAFGAQRPHAGLNLSQHPTLARAGRVALVAQSRSIMAAVMDWAEDVHIGFSLAV 177 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G + V G +VL+ +D T+SIV+ E G A F+ KP++ Sbjct: 178 SLGDEAVLGMS--EVLDYLASDPRTDSIVLYLEDMGP----ARDFMSALRAAASVKPVIV 231 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G +G A+ A++ AG ++ ++ ++LG Sbjct: 232 LKAGR----------------GEEGPADAVFDAALRRAGAVRVRYFVQLFSAV-KVLG 272 >gi|315033645|gb|EFT45577.1| putative membrane protein FdrA [Enterococcus faecalis TX0017] Length = 519 Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + IG+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---IGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ +ADE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|300855543|ref|YP_003780527.1| putative FdrA [Clostridium ljungdahlii DSM 13528] gi|300435658|gb|ADK15425.1| predicted FdrA [Clostridium ljungdahlii DSM 13528] Length = 524 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 15/219 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 A K AN ++I +P A D ++++ + ++ ++ + V D + +K Sbjct: 110 AALKHMKDANMAIISLPGKYAADEARKALKNGLN-VMLFSDNVTVEDEIELKKMGRSKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + + ++ RKG +GI+ SGT T E + G G S A+G Sbjct: 169 LVMGPDCGTAIINH---VPLCFANVVRKGDIGIVGASGTGTQEVTVLIDKLGAGISQAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 GG V G I+ + + D T+ IV+V + E A+ + D K Sbjct: 226 TGGRDLKSSVGGIMMIEGFKALIEDPDTKVIVLVSKPPAP---EVAKNILDMVASTNKPI 282 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKE 277 +V F+ G + + +GA A K A+ + Sbjct: 283 VVDFIGGDR----KAIEDSGAYACVSLEDAAYKAVALSK 317 >gi|311103867|ref|YP_003976720.1| GNAT family acetyltransferase [Achromobacter xylosoxidans A8] gi|310758556|gb|ADP14005.1| acetyltransferase, GNAT family protein 1 [Achromobacter xylosoxidans A8] Length = 805 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 97/265 (36%), Gaps = 36/265 (13%) Query: 44 KGSTYWT----GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99 KG T G ++P T+ + +++ V P+ + + P V Sbjct: 26 KGKTTVVACEVGAAPDLP--DTLQGLAPGERPDLALVCVSPA-VLPETLRRLSPLAPRSV 82 Query: 100 CITEGI-----PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 + P + +A E++ L+GP G P + + R G V Sbjct: 83 ILLPHELPDPYPRGTLALCRAWAEENRCELLGPRSFGAQRPHAGLNLSQHPVLARAGRVA 142 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 +L++S ++ + +G STAV +G + V G VL+ +D T+SIV+ E Sbjct: 143 LLAQSRSIMAAVMDWAEDVHIGFSTAVSLGDEAVVGLS--KVLDYLASDPRTDSIVLYLE 200 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-N 273 G A +F+ KP++ AG+ A+ Sbjct: 201 DVGP----AREFMSTLRAAASVKPVIVLKAGR----------------ADTDSADAIFDA 240 Query: 274 AMKEAGICIAPSPARIGRSLVELLG 298 A++ AG ++ ++ ++LG Sbjct: 241 ALRRAGAVRVRYFVQLFSAV-KVLG 264 >gi|161519829|ref|YP_001583256.1| GCN5-related N-acetyltransferase [Burkholderia multivorans ATCC 17616] gi|160343879|gb|ABX16964.1| GCN5-related N-acetyltransferase [Burkholderia multivorans ATCC 17616] Length = 846 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 57/289 (19%), Positives = 102/289 (35%), Gaps = 31/289 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + +AG+ G + P G+ VP V Sbjct: 76 VAVVGASSRAGSIGAMVWSRVLDGAFDGPVWPVNPKHRELDGHAVVP---DVDRLPA--P 130 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS---SRLIGP 127 + +VI P+ + + E + + + + D + L+ + R++GP Sbjct: 131 PSVAVICTRPATWAGIVRKLGELGTRVAIIVGDARSDADRAALDRALKAAKPFVLRIVGP 190 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G+L+P P R G V +S+S LT + + GLG S V +GG+ Sbjct: 191 GSLGVLSPARHAHFGAPAYTVRSGGVAWVSQSNALTNAVLGWANARGLGFSHVVALGGEA 250 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + DVL+ +D T +I++ + + A +F+ R KP++ G+ Sbjct: 251 --DVDAGDVLDYLASDPGTRAILLELDSVRA----ARKFMSAARAAARNKPVLALRTGRA 304 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 P G A A + AG+ + + + L Sbjct: 305 DPG------------DGLYTA-----AFQRAGMVRVDALDDLLDEIETL 336 >gi|256618226|ref|ZP_05475072.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256597753|gb|EEU16929.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] Length = 524 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 106 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 164 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + IG+ + R G +GI+ SGT + E Q + G G Sbjct: 165 HEKELFVMGPDCGTAIING---IGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 221 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ +ADE T++I+++ + E + LK A Sbjct: 222 SQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLISKPPAPEVTE--KILKKLAVS 279 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 280 --TKPVVIYFIG 289 >gi|157371983|ref|YP_001479972.1| GCN5-related N-acetyltransferase [Serratia proteamaculans 568] gi|157323747|gb|ABV42844.1| GCN5-related N-acetyltransferase [Serratia proteamaculans 568] Length = 882 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 95/286 (33%), Gaps = 37/286 (12%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA------- 70 G+AG + V + P+ + V Sbjct: 25 GRAGNLMMSNLLAGGFNGPVMPVTPR---------------YKAVCGVMAYPDVASLPIS 69 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + +++ I E + + ++ P +KA ++ S RL+GPN Sbjct: 70 PDLAILCTHAQRNLALIEELGKRGCKTAIVLSS--PPEQFAELKACAQRYSMRLLGPNSL 127 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G+L P KG + +S+S + + Q +G S + +G Sbjct: 128 GLLAPWQGINASFSPVPILKGKLAFISQSAAVANTILDWAQQREVGFSYFIALGDSLDID 187 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 + + L+ D T +I++ E +A +FL R KPI+ +G++ Sbjct: 188 VDDL--LDFLARDSKTSAILLYLENIS----DARRFLSASRSASRNKPILVVKSGRSQ-- 239 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A +++ +G A++ AG+ + ++ L Sbjct: 240 -----QAQLLLNSQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|170740807|ref|YP_001769462.1| CoA-binding domain-containing protein [Methylobacterium sp. 4-46] gi|168195081|gb|ACA17028.1| CoA-binding domain protein [Methylobacterium sp. 4-46] Length = 918 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 55/288 (19%), Positives = 104/288 (36%), Gaps = 21/288 (7%) Query: 15 GLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANAS 74 G + + G+F + G I P G +P ++ + E A+ Sbjct: 19 GASERPGSFGAAILRNLREADFPGPIWPVNPRHDTVDG---LPCHRSLEDLPE--PADLV 73 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV-LDMVRVKARL--EKSSSRLIGPNCPG 131 V+ P + + + I+ G+ + ARL RL+GP C G Sbjct: 74 VVVSPAESVPGVVAAAGARGCGGALIISAGLGAGEGSLAEAARLAGRAHGLRLLGPECMG 133 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 + P + + +G + ++++S T+ S G G S + +G Sbjct: 134 LAVPAARLNASLLAHRPPRGDLALITQSRTVAAGIAEWASGRGYGFSGVLSVGQA--VDV 191 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP- 250 + D L+ F AD T +I++ E +A +F+ R KP+V +G+ Sbjct: 192 DIADCLDHFSADRGTRAILLHLETI----RDAPKFMSAARAAARAKPVVVLRSGRHETAR 247 Query: 251 --GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GR + H+G + A + AG+ + + ++ L Sbjct: 248 ADGRPVTHSGILAKPDA----VYDAAFRRAGLLRVNALHEMFSAVETL 291 >gi|289806949|ref|ZP_06537578.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 209 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 83/212 (39%), Gaps = 16/212 (7%) Query: 86 AIIESIEA-EIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP 144 A+++++ A + ++ P + A RL+GPN G+L P Sbjct: 11 ALLDALGAKGCKTCIILSA--PTSQHEELLASARHYKMRLLGPNSLGLLAPWQGLNASFS 68 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 ++G + +S+S ++ + Q +G S + +G + ++L+ D Sbjct: 69 PVPIKQGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVD--ELLDYLARDS 126 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 T +I++ E +A +F+ R KPI+ +G++ P + + + A + Sbjct: 127 KTSAILLYLEQLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQRLLNTSAGMDPA 181 Query: 265 KGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A++ AG+ + ++ L Sbjct: 182 WD------AAIQRAGLLRVQDTHELFSAVETL 207 >gi|300861516|ref|ZP_07107600.1| Protein FdrA family protein [Enterococcus faecalis TUSoD Ef11] gi|300848977|gb|EFK76730.1| Protein FdrA family protein [Enterococcus faecalis TUSoD Ef11] gi|315145845|gb|EFT89861.1| putative membrane protein FdrA [Enterococcus faecalis TX2141] Length = 515 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALYEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ +ADE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|183600601|ref|ZP_02962094.1| hypothetical protein PROSTU_04187 [Providencia stuartii ATCC 25827] gi|188019878|gb|EDU57918.1| hypothetical protein PROSTU_04187 [Providencia stuartii ATCC 25827] Length = 516 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 46/204 (22%), Positives = 94/204 (46%), Gaps = 12/204 (5%) Query: 51 GGNVNVPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 GG+ + + T+ A +N +VI V A ++E ++ ++ ++ + + D Sbjct: 94 GGSQHEAKYATLHSAHSHIPESNLAVISVNGQFAAREARIALENDLN-VMLFSDNVSIDD 152 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 + +K + ++GP+C + + + G+ R+G++GI+ SGT + E + Sbjct: 153 ELALKQLASRKGLLMMGPDCGTAIINGA---ALCFGNNVRRGNIGIVGASGTGSQELSVR 209 Query: 170 TSQEGLGQSTAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + G G S +G GG + G ID L++ ADE T IV++ + A+ Sbjct: 210 IHEFGAGVSQLIGTGGRDLSEKIGGIMMIDALKMLDADEETHVIVLISKPPA---ATVAK 266 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAP 249 + +A++ K +V F+ + P Sbjct: 267 KVLAQAEKCHKPVVVCFLGNQPIP 290 >gi|227827072|ref|YP_002828851.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus M.14.25] gi|238619237|ref|YP_002914062.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus M.16.4] gi|227458867|gb|ACP37553.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus M.14.25] gi|238380306|gb|ACR41394.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus M.16.4] Length = 660 Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 94/240 (39%), Gaps = 19/240 (7%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 V F +V E + + +I VP + E +E + + IT G + +++ Sbjct: 53 GVKAFKSVKEIPD--DIDLGIITVPREIVPQVMEELVEKGVRASIVITAGFREVGEEKLE 110 Query: 115 AR----LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 K R++GPN GI+TP+ + ++G++G++ +SG L + Sbjct: 111 NEVIGIARKGGIRVLGPNTFGIITPE--FNATFTYTDVKRGNIGLVVQSGGLGVYMLNWA 168 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + +G S V +G + +V+ D T +I + E + FL+ Sbjct: 169 QKYRIGISYMVSLGNQA--DVKEYEVINYLSRDAETRAIFVYLEGVS----DGNAFLETL 222 Query: 231 AKRGRKKPIVGFVAG-KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + R+KP+V G + H G++ G E A+K G + + + Sbjct: 223 PEATRRKPVVFLKGGVTNSGASAAKTHTGSLA----GSFEVFKAAVKTVGGILVENLHDM 278 >gi|312883380|ref|ZP_07743106.1| Acyl-CoA synthetase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368996|gb|EFP96522.1| Acyl-CoA synthetase [Vibrio caribbenthicus ATCC BAA-2122] Length = 892 Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 89/234 (38%), Gaps = 15/234 (6%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP------VLDMVRVKARLEKSSS 122 T+ + +++ P S + + + + V +++ +++ Sbjct: 66 TSPDIALVCTPRSKHVETFKQLAQVKAKAAVILSDSQVDRDINTENIAKSCLKIAKENGI 125 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP+ GI+ P S + KG + +S+SG + + +G ST V Sbjct: 126 RILGPDSLGIIVPWSNFNASLSPIDAHKGKLAFVSQSGAICTTVLDWAYDRDIGFSTFVS 185 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + D+L+ D TE+I++ + + ++A +F+ R K I+ Sbjct: 186 LGSS--LDIQVADLLDFLANDSHTEAILIYLD----SIDDARRFMSAARAASRNKRILVL 239 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G++ + S + A++ AG+ + + ++ L Sbjct: 240 KGGRSIEGQQASIAHTGGTSTLDVIYDS---AIQRAGMLRVNNSHELFAAVETL 290 >gi|229582503|ref|YP_002840902.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus Y.N.15.51] gi|229584239|ref|YP_002842740.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus M.16.27] gi|284997114|ref|YP_003418881.1| CoA-binding domain protein [Sulfolobus islandicus L.D.8.5] gi|228013219|gb|ACP48980.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus Y.N.15.51] gi|228019288|gb|ACP54695.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus M.16.27] gi|284445009|gb|ADB86511.1| CoA-binding domain protein [Sulfolobus islandicus L.D.8.5] Length = 660 Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 94/240 (39%), Gaps = 19/240 (7%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 V F +V E + + +I VP + E +E + + IT G + +++ Sbjct: 53 GVKAFKSVKEIPD--DIDLGIITVPREIVPQVMEELVEKGVRASIVITAGFREVGEEKLE 110 Query: 115 AR----LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 K R++GPN GI+TP+ + ++G++G++ +SG L + Sbjct: 111 NEVIGIARKGGIRVLGPNTFGIITPE--FNATFTYTDVKRGNIGLVVQSGGLGVYMLNWA 168 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + +G S V +G + +V+ D T +I + E + FL+ Sbjct: 169 QKYRIGISYMVSLGNQA--DVKEYEVINYLSRDAETRAIFVYLEGVS----DGNAFLETL 222 Query: 231 AKRGRKKPIVGFVAG-KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + R+KP+V G + H G++ G E A+K G + + + Sbjct: 223 PEATRRKPVVFLKGGVTNSGASAAKTHTGSLA----GSFEVFKAAVKTVGGILVENLHDM 278 >gi|295114358|emb|CBL32995.1| Succinyl-CoA synthetase, alpha subunit [Enterococcus sp. 7L76] Length = 519 Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALYEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ +ADE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|149370451|ref|ZP_01890140.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [unidentified eubacterium SCB49] gi|149356002|gb|EDM44559.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, alpha subunit) [unidentified eubacterium SCB49] Length = 97 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 48/100 (48%), Positives = 67/100 (67%), Gaps = 3/100 (3%) Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 + + D TE++VM+GEIGG E +AA + K+ G KKP++GF+AG+TAP GRTMGHAG Sbjct: 1 MLVNDPETEAVVMIGEIGGQLEADAALWYKN---SGSKKPVIGFIAGETAPAGRTMGHAG 57 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 A++ G A+ K M E GI + SPA IG+ + E+L Sbjct: 58 AIVGGADDTAQAKKKIMSECGIHVVDSPAEIGKKVAEVLA 97 >gi|15898607|ref|NP_343212.1| hypothetical protein SSO1806 [Sulfolobus solfataricus P2] gi|13815058|gb|AAK42002.1| Conserved hypothetical protein [Sulfolobus solfataricus P2] Length = 660 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 92/239 (38%), Gaps = 17/239 (7%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-- 112 V + +V E + + VI VP + E +E + + IT G + + Sbjct: 53 GVKAYKSVKEIPD--DIDLGVIAVPREVVPQTMEEFVEKGVKASIVITAGFREVGEEKLE 110 Query: 113 --VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 V + K R++GPN GI+TP+ + ++G+VG++ +SG L + Sbjct: 111 NEVISIARKGGIRVLGPNTFGIITPE--FNATFTYTDVKRGNVGLVVQSGGLGVYMLNWA 168 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + +G S V +G + +V+ D T +I + E + FL++ Sbjct: 169 QKYRIGISYMVSLGNQA--DVKEYEVINYLSKDAETRAIFVYLEGVS----DGNAFLEEL 222 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + R+KP+V G ++ A G E A+ G + + + Sbjct: 223 PEATRRKPVVFLKGGVSSSGA---SAAKTHTGSLAGSFEVFKAAVNTIGGILVDNLHDM 278 >gi|330831628|ref|YP_004394580.1| acyl-CoA synthetase [Aeromonas veronii B565] gi|328806764|gb|AEB51963.1| Acyl-CoA synthetase [Aeromonas veronii B565] Length = 860 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 79/226 (34%), Gaps = 20/226 (8%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + ++I + + + + + + +K ++ RL+GPN Sbjct: 70 PDLAIICTRRERVLPLLEALGQKGAGAAIILAADFSPEERLELKRVCQQYGIRLLGPNSM 129 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G+L P + G V LS+S ++ + Q LG S + +G Sbjct: 130 GMLLPGQGINASFSPIAAKPGQVAFLSQSAAVSTTILDWAKQHELGFSAFISLGDH--CD 187 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 +F +L+ D T +I++ + +A FL R KPI+ +G+ P Sbjct: 188 IDFGQLLDQLSRDSVTRAILIYMDKL----HDARHFLSAARAASRNKPILVLKSGRHEP- 242 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + G D A++ AG+ + ++ L Sbjct: 243 -----------AHGLDNVYD--AAIRRAGMLRVRDTHELFAAVETL 275 >gi|307132327|ref|YP_003884343.1| putative acyl-CoA synthetase [Dickeya dadantii 3937] gi|306529856|gb|ADM99786.1| predicted acyl-CoA synthetase [Dickeya dadantii 3937] Length = 888 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 98/279 (35%), Gaps = 22/279 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AG + V + PK V + VA + +VI Sbjct: 25 GRAGFLMMRNLLDGGFNGPVLPVTPK------YQAVCGVLAYRDVASLP--MTPDLAVIC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + ++ ++ P +K + + RL+GPN G+L P Sbjct: 77 TRADRNLPLLEALGQRGCKTVIVLSA--PPSQFAELKTCATRYAVRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 KG + +S+S ++ + Q G+G S + +G + + L Sbjct: 135 GLNASFSPVPILKGKLAFISQSAAVSNTILDWAQQRGIGFSYFIALGDSLDIDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +FL R KPI+ +G++ + + H Sbjct: 193 DFLARDGKTSAILLHLEHIS----DARRFLSAARSASRNKPILVIKSGRS-RQAQQLLHD 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G G A D A++ AG+ + ++ L Sbjct: 248 G---QHGLDTAYD--AAIQRAGLLRVQDTHELFSAVETL 281 >gi|284175390|ref|ZP_06389359.1| hypothetical protein Ssol98_12180 [Sulfolobus solfataricus 98/2] gi|261603105|gb|ACX92708.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus solfataricus 98/2] Length = 660 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 92/239 (38%), Gaps = 17/239 (7%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-- 112 V + +V E + + VI VP + E +E + + IT G + + Sbjct: 53 GVKAYKSVKEIPD--DIDLGVIAVPREVVPQTMEEFVEKGVKASIVITAGFREVGEEKLE 110 Query: 113 --VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 V + K R++GPN GI+TP+ + ++G+VG++ +SG L + Sbjct: 111 NEVISIARKGGIRVLGPNTFGIITPE--FNATFTYTDVKRGNVGLVVQSGGLGVYMLNWA 168 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + +G S V +G + +V+ D T +I + E + FL++ Sbjct: 169 QKYRIGISYMVSLGNQA--DVKEYEVINYLSKDAETRAIFVYLEGVS----DGNAFLEEL 222 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + R+KP+V G ++ A G E A+ G + + + Sbjct: 223 PEATRRKPVVFLKGGVSSSGA---SAAKTHTGSLAGSFEVFKAAVNTIGGILVDNLHDM 278 >gi|323474129|gb|ADX84735.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus REY15A] gi|323476800|gb|ADX82038.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus HVE10/4] Length = 660 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 94/240 (39%), Gaps = 19/240 (7%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 V F +V E + + +I VP + E +E + + IT G + +++ Sbjct: 53 GVRAFKSVKEIPD--DIDLGIITVPREIVPQVMEELVEKGVRASIVITAGFREVGEEKLE 110 Query: 115 AR----LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 K R++GPN GI+TP+ + ++G++G++ +SG L + Sbjct: 111 NEVIGIARKGGIRVLGPNTFGIITPE--FNATFTYTDVKRGNIGLVVQSGGLGVYMLNWA 168 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + +G S V +G + +V+ D T +I + E + FL+ Sbjct: 169 QKYRIGISYMVSLGNQA--DVKEYEVINYLSRDAETRAIFVYLEGVS----DGNAFLETL 222 Query: 231 AKRGRKKPIVGFVAG-KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + R+KP+V G + H G++ G E A+K G + + + Sbjct: 223 PEATRRKPVVFLKGGVTNSGASAAKTHTGSLA----GSFEVFKAAVKTVGGILVENLHDM 278 >gi|118590616|ref|ZP_01548017.1| hypothetical protein SIAM614_05598 [Stappia aggregata IAM 12614] gi|118436592|gb|EAV43232.1| hypothetical protein SIAM614_05598 [Stappia aggregata IAM 12614] Length = 909 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 76/229 (33%), Gaps = 12/229 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSRLIGP 127 + ++ I ++ + G P + + + ++ RLIGP Sbjct: 70 PDLAIYLAKAETLPATIRVLGAGGTKAVLIPSPGFETWPEELLQECREAAQATNLRLIGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G+ P + ++ KG V SRSG + + G S V +G Sbjct: 130 GTLGLAVPATGLNALLSAERPEKGEVAFFSRSGAVLNATLSWAKAHRTGFSAVVSLGAR- 188 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + D+++ F D T +IV+ E +F+ R KP++ +GK+ Sbjct: 189 -MDVDISDLIDYFAQDYHTRAIVLHLEGIAVP----RKFISAARAAARSKPVIVIRSGKS 243 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G T ++ E + G+ + +L L Sbjct: 244 RDSGGTGRTHAGRLARTDRVYETV---FRRTGLLRVHDLDEMFEALETL 289 >gi|18313669|ref|NP_560336.1| hypothetical protein PAE2895 [Pyrobaculum aerophilum str. IM2] gi|18161219|gb|AAL64518.1| conserved hypothetical protein, authentic frameshift [Pyrobaculum aerophilum str. IM2] Length = 359 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 95/268 (35%), Gaps = 21/268 (7%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK Y G V + ++ E V+ P A I ++ A Sbjct: 40 AVNPKYDVEYVGGVEVRF--YDKISSLPEAPE--LVVVATPAEVALGVIDDAGRAGAKAA 95 Query: 99 VCITEGIPVLDMVRV----KARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRK 150 V ++ G + + + R++GPNC G+ D+ + Sbjct: 96 VVVSGGFSEIGRQELEEGLIKTARRYGIRVLGPNCIGVYNAFNGLDTMFLPAEKAGRPPA 155 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G + LS+SG + A+ + E +G AV G D LE DE + + Sbjct: 156 GPIAFLSQSGAVMTAALDWAAGEYVGVGIAVNFGNRA--DVTEADFLEFLEGDERIKVVA 213 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + E + A+FL+ + KPIV + AG+ R + A ++G E Sbjct: 214 LYLEGFRR-RSDVARFLQ--IVKKMDKPIVVYKAGRGNDAQRAVASHTAAMAGR---YEL 267 Query: 271 KINAMKEAGICIAPSPARIGRSLVELLG 298 ++ G+ A + + + L Sbjct: 268 YKGLFRQTGVVEAEDLIELFD-MAKALA 294 >gi|307545206|ref|YP_003897685.1| hypothetical protein HELO_2616 [Halomonas elongata DSM 2581] gi|307217230|emb|CBV42500.1| K09181 hypothetical protein [Halomonas elongata DSM 2581] Length = 916 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 80/234 (34%), Gaps = 17/234 (7%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD--------MVRVKARLEKSSS 122 + +VI P I I + ++ G + D R+ + S Sbjct: 71 PDLAVICSPVETVPAMIERLGRFGIRAALVLSGGAHLDDPCGETESVRSRMLSAARASGI 130 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP C G++ P ++G V L +SG L + + G+G S + Sbjct: 131 RVLGPECMGLIVPGRKLNASYASQPVKRGRVAYLGQSGMLGNAMIDWAAGRGIGFSHLLT 190 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G D+++ T++I++ E +A + R + ++ Sbjct: 191 LGDS--VDVMLPDLIDYINQYAPTQAILLHLERI----LDAQHLMTAMRDASRHRLVLAI 244 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +G+TA + I+ + A AG+ + +L L Sbjct: 245 KSGRTAESDISNLPPTPGIANRD---QVFDAAFARAGVVRVDDSDELFDALETL 295 >gi|227829801|ref|YP_002831580.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus L.S.2.15] gi|227456248|gb|ACP34935.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus L.S.2.15] Length = 660 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 94/240 (39%), Gaps = 19/240 (7%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 V F +V E + + +I VP + E +E + + IT G + +++ Sbjct: 53 GVKAFKSVKEIPD--DIDLGIITVPREIVPQVMEELVEKGVRASIVITAGFREVGEEKLE 110 Query: 115 AR----LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 K R++GPN GI+TP+ + ++G++G++ +SG L + Sbjct: 111 NEVIGIARKGGIRVLGPNTFGIITPE--FNATFTYTDVKRGNIGLVVQSGGLGVYMLNWA 168 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + +G S V +G + +V+ D T +I + E + FL+ Sbjct: 169 QKYRIGISYMVSLGNQA--DVKEYEVINYLSRDAETRAIFVYLEGVS----DGNAFLETL 222 Query: 231 AKRGRKKPIVGFVAG-KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + ++KP+V G + H G++ G E A+K G + + + Sbjct: 223 PEATKRKPVVFLKGGVTNSGASAAKTHTGSLA----GSFEVFKAAVKTVGGILVENLHDM 278 >gi|307278154|ref|ZP_07559236.1| putative membrane protein FdrA [Enterococcus faecalis TX0860] gi|306505143|gb|EFM74331.1| putative membrane protein FdrA [Enterococcus faecalis TX0860] Length = 519 Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALYEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ +ADE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|227517370|ref|ZP_03947419.1| bacterial FdrA protein [Enterococcus faecalis TX0104] gi|227075240|gb|EEI13203.1| bacterial FdrA protein [Enterococcus faecalis TX0104] Length = 519 Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ +ADE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|83310337|ref|YP_420601.1| hypothetical protein amb1238 [Magnetospirillum magneticum AMB-1] gi|82945178|dbj|BAE50042.1| Hypothetical protein yfiQ [Magnetospirillum magneticum AMB-1] Length = 911 Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 58/304 (19%), Positives = 102/304 (33%), Gaps = 29/304 (9%) Query: 1 MSI----LVDKNTKVLVQGLTGK---AGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN 53 MSI + + T V V G + + AG + + +HPK G Sbjct: 28 MSIHNLSFLFEPTSVAVIGASDRPRSAGAVVMRNLLTAGFKGPIMPVHPK---HRAIAGV 84 Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV 113 + P ++ + +V+ P I + V I + D + Sbjct: 85 LAYPDVRSMPLT-----PDLAVLCTPGETIPGLIEDLGRRGTRAAVVIAGDV---DKEAM 136 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 A S R++G G+L P G V +S+SG L+ + Sbjct: 137 LAAARPWSLRILGGGALGLLVPRIRLDASFSHVPALPGKVAFVSQSGALSTAVLDWARPR 196 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G+G S + +G +F DV++ D+ T +I++ E G+ F+ Sbjct: 197 GIGFSHFISLG--DAHDIDFADVMDYLANDDQTRAILLYIESIGAR----RNFIPAARAA 250 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRS 292 R KP++ A P G ++ ED A++ AG + + Sbjct: 251 ARNKPVLLVR----AVPEADDHPVGKFLAESLARPEDAFDAAIRRAGALRVHDIDELFGA 306 Query: 293 LVEL 296 + L Sbjct: 307 VETL 310 >gi|315154827|gb|EFT98843.1| bacterial FdrA protein [Enterococcus faecalis TX0043] Length = 519 Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALYEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ +ADE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|242238334|ref|YP_002986515.1| GCN5-related N-acetyltransferase [Dickeya dadantii Ech703] gi|242130391|gb|ACS84693.1| GCN5-related N-acetyltransferase [Dickeya dadantii Ech703] Length = 887 Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 99/279 (35%), Gaps = 22/279 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AG + V + P+ V + VA T + +V+ Sbjct: 25 GRAGFLMMRNLLDGGFGGPVMPVTPR------YRAVCGVLAYPDVAHLP--TTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + E ++ ++ + KA + + RL+GPN G+L P Sbjct: 77 TRAEHNLSLLEALGERGCKAVIVLSAQSSQFHDL--KACAARYAMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 KG + +S+S ++ + Q G+G S + +G + + L Sbjct: 135 GLNASFSPVPIIKGKLAFISQSAAVSNTILDWAQQRGIGFSYFIALGDSIDIDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +FL R KPI+ +G++ + + H Sbjct: 193 DFVARDGKTSAILLHLEHIS----DARRFLSASRSASRNKPILVIKSGRSQ-QAQQLLHC 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G G A D A++ AG+ + ++ L Sbjct: 248 GP---HGLDAAYD--AAIQRAGLLRVRDTHELFSAVETL 281 >gi|312951759|ref|ZP_07770651.1| putative membrane protein FdrA [Enterococcus faecalis TX0102] gi|310630247|gb|EFQ13530.1| putative membrane protein FdrA [Enterococcus faecalis TX0102] gi|315153392|gb|EFT97408.1| putative membrane protein FdrA [Enterococcus faecalis TX0031] Length = 519 Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V D + +K + Sbjct: 101 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDDELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ + DE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|183598083|ref|ZP_02959576.1| hypothetical protein PROSTU_01446 [Providencia stuartii ATCC 25827] gi|188020240|gb|EDU58280.1| hypothetical protein PROSTU_01446 [Providencia stuartii ATCC 25827] Length = 881 Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 105/278 (37%), Gaps = 23/278 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +AG+ + + + ++P + + V + ++ + + + +VI Sbjct: 27 RAGSVMMKNLLTNGFKGPILPVNPNR------SSILGVLAYPSIDKLPLKP--DLAVICT 78 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 S + + + E +++ ++ P + +K ++ RL+GPN GIL P Sbjct: 79 HHSKNPECLKQLGEYGCNVVIILSS--PSIQFAELKKIAQQYQIRLLGPNSLGILAPWQG 136 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 KG + +S+S ++ + +G S + +G + + L+ Sbjct: 137 LNASFSPIPILKGKLAFISQSAAVSNTVLDWARHRDIGFSYFIALGDSIDIDIDDL--LD 194 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E +A +FL R KPI+ +G+T + +G Sbjct: 195 YLARDSKTSAILLYLENI----RDARRFLSASRSASRNKPILVIKSGRTRKAQQLLGEKP 250 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++ + A++ AG+ + ++ L Sbjct: 251 SLDA-------AYDAAIQRAGLLRVQDTHEMFSAVETL 281 >gi|251788489|ref|YP_003003210.1| GCN5-related N-acetyltransferase [Dickeya zeae Ech1591] gi|247537110|gb|ACT05731.1| GCN5-related N-acetyltransferase [Dickeya zeae Ech1591] Length = 888 Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 104/280 (37%), Gaps = 24/280 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AG + V + PK V + VA + +VI Sbjct: 25 GRAGFLMMRNLLDGGFNGPVLPVTPK------YKAVCGVLAYRDVASLP--MTPDLAVIC 76 Query: 78 VPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD 136 +++E++ + ++ ++ P +K+ + + RL+GPN G+L P Sbjct: 77 TRADRNL-SLLEALGQRGCKTVIVLSA--PPAQFAELKSCAARYALRLLGPNSLGLLAPW 133 Query: 137 SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 KG + +S+S ++ + Q G+G S + +G + + Sbjct: 134 QGLNASFSPVPILKGKLAFISQSAAVSNTILDWAQQRGIGFSYFIALGDSLDIDVDDL-- 191 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGH 256 L+ D T +I++ E +A +FL R KPI+ +G++ + + H Sbjct: 192 LDFLARDGKTSAILLHLEHIS----DARRFLSAARSASRNKPILVIKSGRS-RQAQQLLH 246 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G G A D A++ AG+ + ++ L Sbjct: 247 DG---QHGLDAAYD--AAIQRAGLLRVQDTHELFSAVETL 281 >gi|163855521|ref|YP_001629819.1| putative acetyl-CoA synthetase [Bordetella petrii DSM 12804] gi|163259249|emb|CAP41549.1| putative acetyl-CoA synthetase [Bordetella petrii] Length = 722 Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 110/298 (36%), Gaps = 33/298 (11%) Query: 1 MSILVDKNTKVLVQGLTGKAGTF--HTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPV 58 M L+D ++ V V G + G+F HT + I + ++PK VP Sbjct: 20 MRRLIDPSS-VAVVGASDTPGSFGRHTLENIRVGYQGRLYAVNPK------YRSVAGVPC 72 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR-- 116 + ++ + E + ++ VP + ++ + ++ + G + + Sbjct: 73 YASLEDLPEVP--DCVIVAVPNDAVLPLVEQAAMCGVGGVIVFSSGFAEVGDIEKVRIQH 130 Query: 117 -----LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAV 167 ++ R+IGPNC GI+ +S +G +G++S+SG L Y V Sbjct: 131 RMATIAAETGMRIIGPNCVGIVNSNSMAALTFMPKFNEMCWARGDIGLISQSGALGY-CV 189 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 Q + +G S + G + D++ + DE+T+ I + E Sbjct: 190 LQGMERWIGFSHYLSPGNS--CDVDVCDMINYLVDDESTKVIACMFEGVRDGARLLRAA- 246 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 KP++ + +A R + H G + G + A + G+ + Sbjct: 247 --RRALEADKPLLIYKMATSAISRRTALSHTGTMA----GSEQAYAAAFERTGVVVVD 298 >gi|315149117|gb|EFT93133.1| putative membrane protein FdrA [Enterococcus faecalis TX0012] Length = 519 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ +ADE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|255974359|ref|ZP_05424945.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|255967231|gb|EET97853.1| conserved hypothetical protein [Enterococcus faecalis T2] Length = 524 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 106 YKTLDSALYEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 164 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 165 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 221 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ +ADE T++I+++ + E + LK A Sbjct: 222 SQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLISKPPAPEVTE--KILKKLAVS 279 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 280 --TKPVVIYFIG 289 >gi|257420516|ref|ZP_05597506.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|257162340|gb|EEU92300.1| conserved hypothetical protein [Enterococcus faecalis X98] Length = 524 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 106 YKTLDSALYEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 164 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 165 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 221 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ +ADE T++I+++ + E + LK A Sbjct: 222 SQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLISKPPAPEVTE--KILKKLAVS 279 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 280 --TKPVVIYFIG 289 >gi|256761157|ref|ZP_05501737.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256682408|gb|EEU22103.1| conserved hypothetical protein [Enterococcus faecalis T3] Length = 524 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 106 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 164 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 165 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 221 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ +ADE T++I+++ + E + LK A Sbjct: 222 SQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLISKPPAPEVTE--KILKKLAVS 279 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 280 --TKPVVIYFIG 289 >gi|316969047|gb|EFV53211.1| putative LIM domain protein [Trichinella spiralis] Length = 770 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 15/186 (8%) Query: 23 FHTEQAILYCQTQVVGGIHP-----KKG--STYWTGGNVNVPVFTTVAEAKERTAANASV 75 FH + +C P K+ Y T N V +A + T A+A++ Sbjct: 578 FHEKDGRAFCHKDYFTNFTPTCHGCKRPITGHYITALNCEWHSDCFVQQAVKETGADATI 637 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR-LEKSSSRLIGPNCPGILT 134 +YVP + DAI E+I+A++PLIV ITEGIP LDMV+VK + L++S RL+GPNCPG++ Sbjct: 638 LYVPAQASADAIHEAIDAKVPLIVVITEGIPQLDMVKVKQKLLKQSDCRLVGPNCPGLIR 697 Query: 135 PDSCK------IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 + K G+ R G G + SG A + + G + + + Sbjct: 698 GANAKPVVSFIAGVTAPPGRRMGHAGAII-SGGKGTAAHKIEALKEAGVTVVMSPAQMGI 756 Query: 189 KGTEFI 194 I Sbjct: 757 SLARHI 762 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 47/65 (72%) Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 + KP+V F+AG TAPPGR MGHAGA+ISGGKG A KI A+KEAG+ + SPA++G Sbjct: 696 IRGANAKPVVSFIAGVTAPPGRRMGHAGAIISGGKGTAAHKIEALKEAGVTVVMSPAQMG 755 Query: 291 RSLVE 295 SL Sbjct: 756 ISLAR 760 >gi|239820173|ref|YP_002947358.1| CoA-binding domain protein [Variovorax paradoxus S110] gi|239805026|gb|ACS22092.1| CoA-binding domain protein [Variovorax paradoxus S110] Length = 710 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 104/268 (38%), Gaps = 31/268 (11%) Query: 36 VVGGIHP--KKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 GGI+P +KG ++ + +VAE E +VI VPP+G DA+ + + Sbjct: 44 YGGGIYPINRKGGLV-----QSLQAYASVAELPEVPE--LAVIAVPPAGVLDAVQDCAQR 96 Query: 94 EIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCKIGIMP--- 144 + V ++ G + + S R++GPNC G + I Sbjct: 97 GVKAAVILSAGFSEMGEEGSRLQARIGEVARASGMRIVGPNCLGAIGVPDKSIATFSVAL 156 Query: 145 -GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLAD 203 S GSVGI+S+SG L + + GLG S + G + + D + AD Sbjct: 157 ESSFPAAGSVGIVSQSGNLGSFTLRMAGERGLGVSRMLTTGNE--CDVDIADAIASLAAD 214 Query: 204 EATESIVMVGEIGGSAEEEAAQFLKD-EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 T I+ E + A+ ++ R KP+V G + A + Sbjct: 215 PGTSVILCCMETC----RDGAKLMQAMAMAREAGKPLVVLKVGVSEAGSAAA----ASHT 266 Query: 263 GGKGGAEDKINA-MKEAGICIAPSPARI 289 G G++ +A +++ G PS + Sbjct: 267 GALAGSDAVFDAVLRQGGALRVPSIELL 294 >gi|329765691|ref|ZP_08257260.1| CoA-binding domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137757|gb|EGG42024.1| CoA-binding domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 705 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 63/309 (20%), Positives = 110/309 (35%), Gaps = 31/309 (10%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 M + LV G + G I + G + P + + + Sbjct: 249 METFFTPESVALV-GASSTPGKIGNSVLIALGKQDYKGKVFPINPKQE---SILGIKCYP 304 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL------DMVRVK 114 T+ E+ + V+ + + G + + I +V ++ G L +VK Sbjct: 305 TLDAINEK--VDLVVVCIDLAECGPIMETCAKKGIHNVVIVSGGGKELGGDRATMEAKVK 362 Query: 115 ARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 K R++GPNC G+ D G + G++ S+SGT+ + Sbjct: 363 ELSLKHKIRVVGPNCIGMFNAANRLDCAFQGQERMVRSKLGNIAFFSQSGTMGISMLESA 422 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 G S + G + D++ D T+ I + E G + +F+ Sbjct: 423 DV--FGLSKMISFGNR--SDVDEADMIWYAANDPQTKVIGLYVEGFG----DGRKFINTA 474 Query: 231 AKRGR--KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPA 287 + + KKPIV + +G+TA + A +G GG+ I A K+AGI S Sbjct: 475 KRVMKEQKKPIVIWKSGRTAAGAKQ----AASHTGSLGGSNAIIMGAFKQAGIISVDSYQ 530 Query: 288 RIGRSLVEL 296 + L L Sbjct: 531 ELVGVLKAL 539 >gi|257088134|ref|ZP_05582495.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|256996164|gb|EEU83466.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|315026891|gb|EFT38823.1| putative membrane protein FdrA [Enterococcus faecalis TX2137] Length = 519 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ +ADE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|239928483|ref|ZP_04685436.1| hypothetical protein SghaA1_09663 [Streptomyces ghanaensis ATCC 14672] gi|291436809|ref|ZP_06576199.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291339704|gb|EFE66660.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672] Length = 486 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 90/249 (36%), Gaps = 27/249 (10%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------L 108 VP F +V + + +V+ VP + + E E + +V ++ G Sbjct: 68 GVPAFRSVRQV--DGPVDLAVVAVPAERVPEVVAECGEHGVQGLVVVSAGYAESGPDGRE 125 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + + R+IGPN G++ PD + + R G +G+ ++SG + Sbjct: 126 RQRALVRQARTYGMRIIGPNSFGVVNTSPDVRLNASLAPEMPRPGRIGLFAQSGAIGVAL 185 Query: 167 VFQTSQE------GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 + + + G ST V G D+L+ + D T+ ++M E G+ Sbjct: 186 LSRLHRRGGGVTGVTGVSTFVSSGNRA--DVSGNDLLQYWYEDPDTDVVLMYLESIGNP- 242 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +F + + KP+V + R GHA +++AG+ Sbjct: 243 ---RKFTRLARRTAAAKPLVVVQGARHGAGPR--GHAVRATRLPHATVSAL---LRQAGV 294 Query: 281 CIAPSPARI 289 + + Sbjct: 295 IRVDTITEL 303 >gi|238025505|ref|YP_002909737.1| GNAT family acetyltransferase protein [Burkholderia glumae BGR1] gi|237880170|gb|ACR32502.1| Acetyltransferase, GNAT family protein [Burkholderia glumae BGR1] Length = 796 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 102/289 (35%), Gaps = 31/289 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + +AG+ G I P G+ PVF VA + Sbjct: 15 VAVVGASRRAGSLGAIVWARVLDGGFAGPIWPVNPKYDELNGH---PVFARVARLPQ--P 69 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV---RVKARLEKSSSRLIGP 127 + +++ PP+ + + E + + E + R A + R++GP Sbjct: 70 PSVALVCTPPASWPGIVRQLGELGARCAILVGEARTAGERASVERALAAAKPYLLRIVGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G++TP P G V +S+S LT A+ GLG S AV +G + Sbjct: 130 GSLGVVTPQLNAHFGAPACCVSAGGVAWVSQSNALTNAALGWAKARGLGFSHAVALGDEA 189 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + DVL+ +D T +I++ + S A +F+ R KP++ G+ Sbjct: 190 --DVDAGDVLDYLASDPDTRAILLELDSIRS----ARKFMSAARAAARNKPVLALHTGR- 242 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G A ++AG+ + + + L Sbjct: 243 ----------------TDAGDALYTAAFQQAGMVRVDALDDLLDEIETL 275 >gi|271501805|ref|YP_003334831.1| GCN5-like N-acetyltransferase [Dickeya dadantii Ech586] gi|270345360|gb|ACZ78125.1| GCN5-related N-acetyltransferase [Dickeya dadantii Ech586] Length = 888 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 105/280 (37%), Gaps = 24/280 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AG + V + PK V + VA + +VI Sbjct: 25 GRAGFLMMRNLLDGGFNGPVLPVTPK------YKAVCGVLAYRDVASLP--MTPDLAVIC 76 Query: 78 VPPSGAGDAIIESI-EAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD 136 S +++E++ + ++ ++ P +K+ + + RL+GPN G+L P Sbjct: 77 TR-SDRNLSLLEALGQRGCKTVIVLSA--PPSQFAELKSCATRYAMRLLGPNSLGLLAPW 133 Query: 137 SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 KG + +S+S ++ + Q G+G S + +G + + Sbjct: 134 QGLNASFSPVPILKGKLAFISQSAAVSNTILDWAQQRGIGFSYFIALGDSLDIDVDDL-- 191 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGH 256 L+ D T +I++ E +A +FL R KPI+ +G++ + + H Sbjct: 192 LDFLARDGKTSAILLHLEHIS----DARRFLSAARSASRNKPILVIKSGRSQ-QAQQLLH 246 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G G A D A++ AG+ + ++ L Sbjct: 247 GG---QHGLDAAYD--AAIQRAGLLRVQDTHELFSAVETL 281 >gi|257417162|ref|ZP_05594156.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG] gi|257158990|gb|EEU88950.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG] Length = 524 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 106 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 164 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 165 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 221 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ +ADE T++I+++ + E + LK A Sbjct: 222 SQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLISKPPAPEVTE--KILKKLAVS 279 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 280 --TKPVVIYFIG 289 >gi|257417866|ref|ZP_05594860.1| succinyl-CoA synthetase [Enterococcus faecalis T11] gi|257159694|gb|EEU89654.1| succinyl-CoA synthetase [Enterococcus faecalis T11] Length = 524 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 106 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 164 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 165 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 221 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ +ADE T++I+++ + E + LK A Sbjct: 222 SQLIGTGGRDLSAEIGGLMMLDGLDALMADEQTKAILLISKPPAPEVTE--KILKKLAVS 279 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 280 --TKPVVIYFIG 289 >gi|256376047|ref|YP_003099707.1| CoA-binding domain protein [Actinosynnema mirum DSM 43827] gi|255920350|gb|ACU35861.1| CoA-binding domain protein [Actinosynnema mirum DSM 43827] Length = 852 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 114/296 (38%), Gaps = 27/296 (9%) Query: 7 KNTKVLVQGLTGKAGTF--HTEQAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTV 62 K T +V G G+ T H A L ++PK + V + +V Sbjct: 173 KPTSAVVIG-AGRNATSVGHAVLANLVKGEFAGDLYAVNPK------AAELLGVTCYPSV 225 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 AE A + +VI VP + + + + +V +T G+ D + A + K Sbjct: 226 AELP--VAPDLAVICVPAAAVPAVAEDCGKRGVKAMVVVTSGV---DPKPLLASVHKHGM 280 Query: 123 RLIGPNCPGI--LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 R++GPNC G+ P+ G +G++++SG + + Q S G+G + Sbjct: 281 RMVGPNCIGVASTDPEVRMDATFTRKGSGGGGIGLVTQSGGVAIAVLEQLSALGMGTTDV 340 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 V G D+L + DE T S+V+ E G+ +F + + R+KP++ Sbjct: 341 VSTGDK--YDVSGNDLLLWWERDERTTSVVLYLESFGNP----RKFSRLARRVARRKPVL 394 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + R A + E ++AG+ + A + L L Sbjct: 395 AIRSATSEAGQRAAASHTASTATPAVTQEAL---FRQAGVIVVDGIAELVEVLAAL 447 >gi|187921554|ref|YP_001890586.1| GCN5-related N-acetyltransferase [Burkholderia phytofirmans PsJN] gi|187719992|gb|ACD21215.1| GCN5-related N-acetyltransferase [Burkholderia phytofirmans PsJN] Length = 834 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 60/318 (18%), Positives = 109/318 (34%), Gaps = 55/318 (17%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPK---KGSTYWTGGNVNVPVFTTVAEAKERTAANAS 74 G G + + + ++PK G ++P TV + Sbjct: 25 GSTGEMVWTRVLDGGFDGPLWPVNPKYETLGGHAVIHDAGDLPEAPTV-----------A 73 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL---EKSSSRLIGPNCPG 131 +I PP+ I + + + E D + ++ L + R++GP G Sbjct: 74 LICTPPATWPGIIHKLGGLGTRAAIIVGEVRCDEDRLALRHALSAARPNLLRIVGPGSLG 133 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 +++P P + G V +S+S LT + GLG S AV +GG+ Sbjct: 134 VVSPALRAHLGAPSCTVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVALGGEA--DV 191 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP-- 249 + DVL+ +D T +I++ + + A +F+ R KP++ +G+ P Sbjct: 192 DAGDVLDYLASDPGTRAILLELDSVRA----ARKFMSAARAAARNKPVLALRSGRADPAD 247 Query: 250 ------------------------------PGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 G +I+ +G A +A AG Sbjct: 248 ALYTAAFRRAGMVRVDALDDLLDEIETLGVGRVAAGATATLITSDRGLATLACDAFAAAG 307 Query: 280 ICIAPSPARIGRSLVELL 297 +AP P +L + L Sbjct: 308 DTLAPWPDEASDALKQSL 325 >gi|254384493|ref|ZP_04999834.1| acyl-CoA synthetase [Streptomyces sp. Mg1] gi|194343379|gb|EDX24345.1| acyl-CoA synthetase [Streptomyces sp. Mg1] Length = 676 Score = 89.3 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 91/229 (39%), Gaps = 22/229 (9%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSR 123 + +VI VP +A+ + + +V ++ G + ++ R Sbjct: 289 PVDLAVIAVPAERVPEAVAACGDHGVQGLVVLSAGYGESGPQGAARQRELLRQVRSYGMR 348 Query: 124 LIGPNCPGILT--PDSCKIGIMPGSIFR-KGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPN G++ PD + + +G +G+ ++SG + + + G G S+ Sbjct: 349 LIGPNAFGVINTAPDVELNASLAPAPAPARGRIGLFTQSGAIGIALLSALVRRGAGLSSF 408 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 V G D+L+ + DEAT+ ++ E G+ +F + + KP+V Sbjct: 409 VSAGNRA--DVSGNDILQYWYEDEATDVALLYLETLGNP----RKFSRLARRTAAVKPVV 462 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G+ P AG V+ G + + +++AG+ + + Sbjct: 463 VAKGGRHTP-------AGHVVPGTRLSDDTVSALLRQAGVIRVDTVTEL 504 >gi|86742184|ref|YP_482584.1| GCN5-related N-acetyltransferase [Frankia sp. CcI3] gi|86569046|gb|ABD12855.1| GCN5-related N-acetyltransferase [Frankia sp. CcI3] Length = 872 Score = 89.3 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 79/191 (41%), Gaps = 6/191 (3%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC 129 + +V+ VPP+ D + A + +V +T+ + A R++GP Sbjct: 265 PVDLAVVCVPPAQVPDVVAACGRAGVWGLVVLTDQRDAAADAALVAEARADGMRVVGPAS 324 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 GI P + M + G +G S+SG + + G+G S V G Sbjct: 325 MGIQNPAAGLNASMVPRMPPAGRIGCYSQSGPFGGAILAAAAARGVGLSVFVSAGDRA-- 382 Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP 249 D+L+ + D T++++M E G+ +F + + GR+KP++ +G++ Sbjct: 383 DVSGNDLLQYWEEDPETDAVIMHLETFGNP----RKFARLARRVGRRKPVIVVYSGRSTL 438 Query: 250 PGRTMGHAGAV 260 + AG + Sbjct: 439 DDALLRQAGVI 449 >gi|115359594|ref|YP_776732.1| GCN5-related N-acetyltransferase [Burkholderia ambifaria AMMD] gi|115284882|gb|ABI90398.1| GCN5-related N-acetyltransferase [Burkholderia ambifaria AMMD] Length = 813 Score = 89.3 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 101/289 (34%), Gaps = 31/289 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + +AG+ G + P G+ V T V Sbjct: 43 VAVVGASSRAGSIGAMVWARVLDGAFDGPVWPVNPKYRELNGHA---VVTDVDRLPA--P 97 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV---RVKARLEKSSSRLIGP 127 + +VI PP+ + + E + V + E D R + R++GP Sbjct: 98 PSVAVICTPPATWAGIVRKLGELGTRVAVIVGEARTDADRAALDRTLKAAKPFVLRIVGP 157 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G+L+P P R G V +S+S LT + GLG S V +G + Sbjct: 158 GSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWADARGLGFSHVVALGSEA 217 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + DVL+ +D T +I++ + + A +F+ R KP++ G+ Sbjct: 218 --DVDAGDVLDYLASDPGTRAILLELDTVCA----ARKFMSAARAAARNKPVLALRTGR- 270 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A PG + A A + AG+ + + + L Sbjct: 271 ADPGDALYTA----------------AFQRAGMVRVDALDDLLDEIETL 303 >gi|33593910|ref|NP_881554.1| hypothetical protein BP2977 [Bordetella pertussis Tohama I] gi|33563984|emb|CAE43248.1| conserved hypothetical protein [Bordetella pertussis Tohama I] gi|332383329|gb|AEE68176.1| hypothetical protein BPTD_2945 [Bordetella pertussis CS] Length = 819 Score = 89.3 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 89/243 (36%), Gaps = 30/243 (12%) Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-----PVLDMVRVKAR 116 A E + +++ V G + + A P V + P +A Sbjct: 54 CAGVAEGLRPDLALVCV-APGVLPETLRRLAALAPRAVILLPHELPDPYPRGTQALCRAW 112 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ L+GP G P + S+ R G V ++++S ++ + +G Sbjct: 113 AAENRCELLGPRSFGAQRPHAGLNLSQHPSLARAGRVALVAQSRSIMAAVMDWAEDVHIG 172 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S AV +G + V G VL+ +D T+SIV+ E G A +F+ Sbjct: 173 FSIAVSLGDEAVVGLS--QVLDYLASDSRTDSIVLYIEDVGP----AREFMSALRAAASV 226 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVE 295 KP++ AG+ GA+ A++ AG ++ ++ + Sbjct: 227 KPVIVLKAGR----------------ADANGADAVFDAALRRAGAVRVRYFVQLFSAV-K 269 Query: 296 LLG 298 +LG Sbjct: 270 VLG 272 >gi|157382784|gb|ABV48829.1| ATP citrate lyase alpha subunit [Caminibacter mediatlanticus] Length = 349 Score = 89.3 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 53/121 (43%) Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + IGGD G+ FID + + + +V++GE+GG E + + +K+ Sbjct: 1 CIAIGGDRFVGSTFIDHMLRMEKNPDVKYMVLLGEVGGREEYKIIEAIKEGKITKPVIAW 60 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 K G GHAGA + + AE K AM+EAGI + + + + + Sbjct: 61 CIGTIAKHFSSGVQFGHAGASANAEEETAEAKNRAMREAGIHVPDNFNDLPHVIKGVYEQ 120 Query: 300 L 300 L Sbjct: 121 L 121 >gi|134099003|ref|YP_001104664.1| acyl-CoA synthetase (NDP forming type) [Saccharopolyspora erythraea NRRL 2338] gi|133911626|emb|CAM01739.1| acyl-CoA synthetase (NDP forming type) [Saccharopolyspora erythraea NRRL 2338] Length = 892 Score = 89.3 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 92/242 (38%), Gaps = 15/242 (6%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV-- 113 +P F V E E + V+ VP + +V ++ G+ ++ Sbjct: 240 LPAFADVEELPEVP--DLVVVCVPAEAVPQVAESCGRKGVRALVVVSAGVTSDPVLAHGL 297 Query: 114 KARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + + RL+GPNC G++ PD G VG++++SG + + + Sbjct: 298 VDAVRRWGMRLVGPNCLGVINTDPDVRLDATFTSGCAPAGDVGVITQSGGVGIALLDGLA 357 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 GLG S+ V +G D+L + DE T V+ E G+ +F Sbjct: 358 ACGLGVSSVVSVGDK--YDVSGNDMLLWWQRDERTRLAVVYLESFGNP----RKFSWLSR 411 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 + R KP++ +G + P + + S G D + ++++G + Sbjct: 412 RMARGKPVIVLKSGAS-PVAQAAAASHTAASATPGTTRDAL--LRQSGAIGVQGLHDLFA 468 Query: 292 SL 293 ++ Sbjct: 469 TV 470 >gi|312902057|ref|ZP_07761318.1| putative membrane protein FdrA [Enterococcus faecalis TX0470] gi|311290839|gb|EFQ69395.1| putative membrane protein FdrA [Enterococcus faecalis TX0470] Length = 519 Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALHEEPDANLVVISVNGKFAARESHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + IG+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFMMGPDCGTAIING---IGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ + DE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|326317896|ref|YP_004235568.1| CoA-binding domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374732|gb|ADX47001.1| CoA-binding domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 702 Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 93/244 (38%), Gaps = 20/244 (8%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 ++P + VA E + +V+ + A A+ E + + G + Sbjct: 55 DLPCYPDVASLPEVP--DVAVVLLGAERAHMAVKELAGRGCAAAIVLASGYTETGEEGAR 112 Query: 115 A----RLEKSSSRLIGPNCPGILTPDSCKI----GIMPGSIFRKGSVGILSRSGTLTYEA 166 S R++GPN G++ + G + F GS+G++S+SG + Sbjct: 113 RQQQLLAAAGSMRILGPNTIGLVNLTDGIVLSPSGALEMDEFPVGSIGVVSQSGGILGSL 172 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + + G+G S V + E D ++ D AT+ I + E A Sbjct: 173 LSRAAARGIGLSKLVATSNE--VDLELADFIDHLADDPATQVIALYIETVRHPARFRAAC 230 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPS 285 LK KP+V F G++ A +G GA+ +A ++AG+ A S Sbjct: 231 LKAARAG---KPVVAFKIGRSEAGA----QAAVSHTGAMAGADRMYDALFRQAGVIRAKS 283 Query: 286 PARI 289 + + Sbjct: 284 FSDL 287 >gi|320008107|gb|ADW02957.1| GCN5-related N-acetyltransferase [Streptomyces flavogriseus ATCC 33331] Length = 983 Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 84/248 (33%), Gaps = 20/248 (8%) Query: 50 TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL- 108 G VP +V E+ + +V+ VP + + + E + IV ++ G Sbjct: 258 LGTVEGVPAHRSVGGIGEQ--VDLAVVAVPADRVPEVVADCGEHGVQGIVVLSAGYAERG 315 Query: 109 -----DMVRVKARLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGT 161 + + R+IGPN GI+ + + G +G+ ++SG Sbjct: 316 AEGRERQRELVRQARSYGMRIIGPNAFGIINTSESVRLNASLAPESPKAGRIGLFTQSGA 375 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 + + + G G S + G D L+ + D+ T+ ++ E G+ + Sbjct: 376 IGIALLSGLHRRGAGLSAFISAGNRA--DVSGNDFLQYWYEDQGTDVALLYLESLGNPRK 433 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 + A + +G P GHA V M++AG+ Sbjct: 434 FTRLARRTAAVKPVVVVKGARHSGTNPP-----GHAVPVSRIPDATVSAL---MRQAGVI 485 Query: 282 IAPSPARI 289 + + Sbjct: 486 RVDTVTEM 493 >gi|85859901|ref|YP_462103.1| acetyl-CoA synthetase [Syntrophus aciditrophicus SB] gi|85722992|gb|ABC77935.1| acetyl-CoA synthetase [Syntrophus aciditrophicus SB] Length = 482 Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 107/277 (38%), Gaps = 29/277 (10%) Query: 35 QVVGGIHPK--KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 G I+P KG W N+ + ++AE + ++I VP + + + + Sbjct: 55 HYAGKIYPINLKGGKVW-----NLDSYASLAEVP--GNIDLAIIVVPAALVPETLHQCGG 107 Query: 93 AEIPLIVCITEGIPVLD-------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG 145 + V IT G ++ R++ ++ +IGPN G Sbjct: 108 KGVKGAVLITAGFREIEDSQGGVLQERIRKICDQYEMPIIGPNTSGFANIAFGIDASFTS 167 Query: 146 SIFR--KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF-LA 202 KG V I+S+SG L + F + +G S+ + +G G F + + F Sbjct: 168 EFCELEKGGVAIISQSGGLCHLCGFLALHQRMGVSSLMSLGNRLNVG--FPEAVRFFIEE 225 Query: 203 DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 DEAT+ I + E +E + L KKPIV + +GK+A ++ Sbjct: 226 DEATKVIALYIE----GLDEPRELLDMARSLRGKKPIVAYKSGKSAKSDSASKFHTGSLA 281 Query: 263 GGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 G + A ++AGI S + + ++L S Sbjct: 282 GNHEIWK---GAFRQAGILEVTSSEELIDT-AKVLDS 314 >gi|152965514|ref|YP_001361298.1| CoA-binding domain protein [Kineococcus radiotolerans SRS30216] gi|151360031|gb|ABS03034.1| CoA-binding domain protein [Kineococcus radiotolerans SRS30216] Length = 899 Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 113/292 (38%), Gaps = 27/292 (9%) Query: 9 TKVLVQGLTGKAGTF-HTEQAILYCQTQVVGG--IHPKKGSTYWTGGNVNVPVFTTVAEA 65 + V+V G GT H A L ++ G +P+ +V + Sbjct: 207 SSVVVVGARRTPGTVGHRLLADLVAGDFAGAVHAVNAAGAGEELLG----IPLLASVRDL 262 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEK 119 +R + +V+ V P+ D + + + IV ++ G + Sbjct: 263 PDR--VDLAVVAVAPASVIDVVNDCAAVGVRGIVVVSSGFAETGPEGAELQRELVRIARA 320 Query: 120 SSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + R+IGPN G++ D + + R G G+ S+SG L + + GLG Sbjct: 321 NGMRVIGPNSFGVVNTDPAVRLNASLAEEVPRPGRFGLFSQSGALAVTVLSSAQRRGLGL 380 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 ST V G D+++ + DEAT ++ + E G+ +F + R+K Sbjct: 381 STFVSAGNRA--DVSGNDLMQFWHDDEATSAVGLYLESVGNP----RKFSRVARGLARRK 434 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 P++ +G + G GHA + + E + +++AG+ + ++ Sbjct: 435 PVIVVKSGAS-GFGVPPGHA---VRRSRVPFEVVDSMLRQAGVIRVENVHQL 482 >gi|33603344|ref|NP_890904.1| hypothetical protein BB4370 [Bordetella bronchiseptica RB50] gi|33577468|emb|CAE34733.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 819 Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 89/243 (36%), Gaps = 30/243 (12%) Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-----PVLDMVRVKAR 116 A E + +++ V G + + A P V + P +A Sbjct: 54 CAGVAEGQRPDLALVCV-APGVLPETLRRLAALAPRAVILLPHELPDPYPRGTQALCRAW 112 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ L+GP G P + S+ R G V ++++S ++ + +G Sbjct: 113 AAENRCELLGPRSFGAQRPHAGLNLSQHPSLARAGRVALVAQSRSIMAAVMDWAEDVHIG 172 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S AV +G + V G VL+ +D T+SIV+ E G A +F+ Sbjct: 173 FSIAVSLGDEAVVGLS--QVLDYLASDSRTDSIVLYIEDVGP----AREFMSALRAAASV 226 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVE 295 KP++ AG+ GA+ A++ AG ++ ++ + Sbjct: 227 KPVIVLKAGR----------------ADANGADAVFDAALRRAGAVRVRYFVQLFSAV-K 269 Query: 296 LLG 298 +LG Sbjct: 270 VLG 272 >gi|111224289|ref|YP_715083.1| hypothetical protein FRAAL4900 [Frankia alni ACN14a] gi|111151821|emb|CAJ63541.1| hypothetical protein FRAAL4900 [Frankia alni ACN14a] Length = 912 Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 102/293 (34%), Gaps = 39/293 (13%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + + G E ++ G ++P + V+ Sbjct: 229 VAVIGASRQPGAVGHEVFRRLLRSGFTGAVYPVNAAATHVAS-----VYAYQDLHAVPAE 283 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP------VLDMVRVKARLEKSSSRL 124 + +V+ VP + + + + ++ ++ G + RL Sbjct: 284 IDLAVVAVPAQRVTEVLRTCAQKRVRGVIVVSAGFADGGDEGRALLADAIRIARDGGMRL 343 Query: 125 IGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 IGPN G++ P + G VG+ ++SG L + ++ +G ST V Sbjct: 344 IGPNAMGVINTAPTTRLHATFAVGEPPAGRVGVFTQSGALAGTFLTDAARRAVGFSTFVS 403 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 G D LE + +D T+ I++ + G+ +F + + GR KP+V Sbjct: 404 AGDR--SDVSTNDFLEYWQSDPRTDVIMLHLQSFGNP----RRFARIARQLGRHKPVVAL 457 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARIGRSLV 294 +G+ A+ +NA AG+ A + ++ ++ Sbjct: 458 KSGQ-------------------ESADTGVNALFTSAGVVRADTLNQLFDAVQ 491 >gi|226314097|ref|YP_002773993.1| hypothetical protein BBR47_45120 [Brevibacillus brevis NBRC 100599] gi|226097047|dbj|BAH45489.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 514 Score = 88.9 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 54/243 (22%), Positives = 107/243 (44%), Gaps = 22/243 (9%) Query: 43 KKGSTYWTGGNVNVPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCI 101 KKG + ++T+ A AN +VI V + A +++E ++ ++ Sbjct: 90 KKGGSKSATEIK----YSTIDSAAASIPEANLAVISVNGAFAAREARKALENDLH-VMLF 144 Query: 102 TEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGT 161 ++ + + + + +K + ++GP+C + + + G+ RKG++GI+ SGT Sbjct: 145 SDNVSIEEEIALKQFAHEKGLLMMGPDCGTAII---GNVALCFGNAVRKGNIGIVGASGT 201 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGG 217 + E + G G + +G GG V G +D ++ DEAT+ IV++ + Sbjct: 202 GSQEVSVRIHDFGGGITQLIGTGGRDLSEQVGGIMMLDGIKALEEDEATKVIVLISKPPA 261 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKE 277 ++ + + + + K +K +V F+ G+ P GH K E I A+ Sbjct: 262 ASVQ---EKVLAQVKSCKKPVVVYFIGGEETPVLEAGGHFA------KTSKEAAIKAVVL 312 Query: 278 AGI 280 AG Sbjct: 313 AGA 315 >gi|209809423|ref|YP_002264961.1| putative acetyltransferase [Aliivibrio salmonicida LFI1238] gi|208010985|emb|CAQ81395.1| putative acetyltransferase [Aliivibrio salmonicida LFI1238] Length = 894 Score = 88.9 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 100/256 (39%), Gaps = 27/256 (10%) Query: 57 PVFTTVAEAKER-------TAANASVIYVPPSGAGDAIIESI-EAEIPLIVCIT------ 102 P + +V + +V+ S A++E++ + ++ ++ Sbjct: 47 PSYKSVCGILAYDSIEKLPITPDFAVLCTS-SQRNIALLEALGRKGVKCVIILSSDMNLH 105 Query: 103 -EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGT 161 GI + K R++GPN GI+ P +KG++ +S+S Sbjct: 106 SNGIGEPLPFQALRIATKYDMRILGPNSLGIILPWINLNASFSPINAKKGNIAFISQSAA 165 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 + + +++ +G S V +G +F ++L+ D TE+I++ + + + Sbjct: 166 VCTTILDWANEKNIGFSAFVSLGDG--LDIDFSELLDTLCTDSKTEAILLYID----SIK 219 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGI 280 +A +F+ R + I+ +G++ A + + G+ + A++ AG+ Sbjct: 220 DARRFMSAARAAARNRRILVVKSGRS----VAGSEAAQLHTHGEISLDAVYDAAIRRAGM 275 Query: 281 CIAPSPARIGRSLVEL 296 + + ++ L Sbjct: 276 LRVSNTHELFAAVETL 291 >gi|302537390|ref|ZP_07289732.1| acyl-CoA synthetase [Streptomyces sp. C] gi|302446285|gb|EFL18101.1| acyl-CoA synthetase [Streptomyces sp. C] Length = 928 Score = 88.9 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 89/229 (38%), Gaps = 22/229 (9%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSR 123 + +VI VP DA+ E + +V ++ G + ++ R Sbjct: 274 PVDLAVIAVPADRVPDAVAACGENGVQGLVVLSAGYGESGPAGLARQRELVRQVRSYGMR 333 Query: 124 LIGPNCPGILTPD---SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPN G++ + P +G +G+ ++SG + + + G G S+ Sbjct: 334 LIGPNAFGVINTAPEVELNACLAPAPASARGPIGLFTQSGAIGIALLSALLRRGEGLSSF 393 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 V G D+L+ + DEAT+ +M E G+ +F + + KP+V Sbjct: 394 VSAGNRA--DVSGNDILQYWYEDEATDVALMYLETLGNP----RKFTRLARRTAAVKPVV 447 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + G+ P AG V+ G + +++AG+ + + Sbjct: 448 VALGGRHTP-------AGHVVPGTRLPEATVSELLRQAGVIRVDTVTEL 489 >gi|308535238|ref|YP_002138229.2| protein lysine N-acetyltransferase [Geobacter bemidjiensis Bem] gi|308052583|gb|ACH38433.2| protein lysine N-acetyltransferase, putative [Geobacter bemidjiensis Bem] Length = 697 Score = 88.9 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 89/253 (35%), Gaps = 22/253 (8%) Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV-- 111 + + T+ E ++ + + + +P I E I ++ + G L Sbjct: 53 CGLKAYKTLDEIPDQ--VDLAHVIIPSQFVPQTIEECGRKGIKAVIINSAGFCELGEEGA 110 Query: 112 ----RVKARLEKSSSRLIGPNCPGILTPDSCKIG--IMPGSIFRKGSVGILSRSGTLTYE 165 R ++ R+ GPNC GI+ D + G V +++ SG + Sbjct: 111 QLQDDFLRRGKEFGVRVFGPNCQGIINSDPALKAYCNFTFTFPEPGHVSVVALSGGVGAL 170 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + + G+GQ G ++L + DEAT+++V+ E + E Sbjct: 171 IMQALADLGVGQRFYASNGNA--CDISVTEILSYYGEDEATKAVVLYTEGFPNPGE---- 224 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 FL + KKPI+ AG+T + ++G E ++ GI S Sbjct: 225 FLAVAREVAAKKPILAMKAGRTEQGAKAASSHTGSLAGVDIATEL---IFEKTGIL---S 278 Query: 286 PARIGRSLVELLG 298 G + Sbjct: 279 FIDEGEMARAAMA 291 >gi|85860014|ref|YP_462216.1| acetyl-CoA synthetase subunit beta [Syntrophus aciditrophicus SB] gi|85723105|gb|ABC78048.1| acetyl-CoA synthetase beta subunit [Syntrophus aciditrophicus SB] Length = 773 Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 95/256 (37%), Gaps = 23/256 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P G + + ++ E + +++ V + E +I Sbjct: 322 YTGKVYPVNA---RGGVFFGLQSYESIEALPEAP--DLALLTVGGRQVASMLKECGRKQI 376 Query: 96 PLIVCITEGIPVLDMV------RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 P + I G + + ++GPNC G+++ + + ++ Sbjct: 377 PAAIAIAAGFSETGAAGAEAEQDIARIATEGGVTVMGPNCMGMISNEVQLHAVGFVALHP 436 Query: 150 -KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 +G++ +S+SG L + V + G+G +G + G ++VL+ D T Sbjct: 437 ARGTLSFVSQSGNLGSQVVNGCRRRGIGIDKFASVGNEAQIGA--VNVLDYLRDDPNTSC 494 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGG 267 ++M E ++ FL + KP+V AG T + H GA+ G Sbjct: 495 VLMYIE----GIDDGRLFLDAARRTAAVKPVVVLRAGLTESGSKAAASHTGAMA----GS 546 Query: 268 AEDKINAMKEAGICIA 283 A A ++AG+ Sbjct: 547 AAVWEAAARQAGVVTC 562 >gi|217969079|ref|YP_002354313.1| CoA-binding protein [Thauera sp. MZ1T] gi|217506406|gb|ACK53417.1| CoA-binding domain protein [Thauera sp. MZ1T] Length = 728 Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 90/262 (34%), Gaps = 24/262 (9%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P + VP T+ + + ++I P + + Sbjct: 52 YRGRVYPINPK---VPEILGVPTCATLDDVP--GPIDLALICTPAKTLPGLLEACGRKGV 106 Query: 96 PLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 V + G +V R+IGPN G+ K+ ++ R Sbjct: 107 KGAVILASGFRESGPEGARLEQQVLDAARAGGVRIIGPNTSGMFNLHH-KVNLLDLRNAR 165 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEG-LGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 G +G +S+SG + V + G +G ST VG G F D L D T Sbjct: 166 PGDIGFISQSGNMLLALVLEAEHNGHVGFSTYVGPGNQ--TDVGFNDYLRYLGEDVHTRV 223 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG-HAGAVISGGKGG 267 + E + +FL+ + KP+V + +G T + H GA+ G Sbjct: 224 ATLYVEGF----RDGQRFLEVAREITPVKPVVVYKSGATELGKKAASSHTGALA----GS 275 Query: 268 AEDKINAMKEAGICIAPSPARI 289 ++ +++ G+ + I Sbjct: 276 YAMTVDLLRQVGVSVVHHSDEI 297 >gi|307287294|ref|ZP_07567358.1| putative membrane protein FdrA [Enterococcus faecalis TX0109] gi|306501627|gb|EFM70921.1| putative membrane protein FdrA [Enterococcus faecalis TX0109] gi|315166013|gb|EFU10030.1| putative membrane protein FdrA [Enterococcus faecalis TX1302] Length = 519 Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ + DE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|218778225|ref|YP_002429543.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759609|gb|ACL02075.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 709 Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 100/281 (35%), Gaps = 25/281 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 K G+ + +HPK V + +++ + +V+ V Sbjct: 28 KMGSMQFLNILHCGFPGTAIPVHPK------HEEIFGVKAYPSISSLPD--TPELAVLVV 79 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLD---MVRVKARLE---KSSSRLIGPNCPGI 132 P + + E + + I+ G + + K LE K R +GPNC G+ Sbjct: 80 PTGLVINMLDEFGKLGTKHAIIISAGFREMGADGKILEKQLLETADKHGIRFLGPNCMGV 139 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 + + G + I S+SGT + + G+ + A+ +G + Sbjct: 140 FNSQYPFNATVTPFQDKPGFLSIASQSGTYLAQTLTYLKYRGVRLNQAMSVGNEANI--N 197 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG-FVAGKTAPPG 251 +D LE D T++I + E + +FL+ + R KPIV +V G A Sbjct: 198 IVDCLEYLGEDPKTKAIGLYIEALS----DPGRFLEVAREVSRVKPIVAQYVGGSKAGAK 253 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 + H G++ ++AG+ S + + Sbjct: 254 SGLSHTGSIAGPDFL----YNGLFEQAGVIRVHSIEDVYKV 290 >gi|291006756|ref|ZP_06564729.1| acyl-CoA synthetase (NDP forming type) [Saccharopolyspora erythraea NRRL 2338] Length = 904 Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 92/242 (38%), Gaps = 15/242 (6%) Query: 56 VPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV-- 113 +P F V E E + V+ VP + +V ++ G+ ++ Sbjct: 252 LPAFADVEELPEVP--DLVVVCVPAEAVPQVAESCGRKGVRALVVVSAGVTSDPVLAHGL 309 Query: 114 KARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + + RL+GPNC G++ PD G VG++++SG + + + Sbjct: 310 VDAVRRWGMRLVGPNCLGVINTDPDVRLDATFTSGCAPAGDVGVITQSGGVGIALLDGLA 369 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 GLG S+ V +G D+L + DE T V+ E G+ +F Sbjct: 370 ACGLGVSSVVSVGDK--YDVSGNDMLLWWQRDERTRLAVVYLESFGNP----RKFSWLSR 423 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 + R KP++ +G + P + + S G D + ++++G + Sbjct: 424 RMARGKPVIVLKSGAS-PVAQAAAASHTAASATPGTTRDAL--LRQSGAIGVQGLHDLFA 480 Query: 292 SL 293 ++ Sbjct: 481 TV 482 >gi|91780610|ref|YP_555817.1| putative CoA ligase [Burkholderia xenovorans LB400] gi|91693270|gb|ABE36467.1| Putative CoA ligase [Burkholderia xenovorans LB400] Length = 708 Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 57/272 (20%), Positives = 104/272 (38%), Gaps = 29/272 (10%) Query: 27 QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA 86 Q Y V ++P G++ G V + E + + +++ VP + A Sbjct: 35 QDCGYAGK--VHLVNP--GTSEVFGKRC----HANVKDIGE--SIDMALVVVPRTAVIGA 84 Query: 87 IIESIEAEIPLIVCITEGIPVLD-------MVRVKARLEKSSSRLIGPNCPGILTP--DS 137 + + +EA V ++ G + L++ L GP+C G++ Sbjct: 85 LRDCVEAGAKAAVVVSTGFGESHDAVGLALQRELSEFLDEHPIALCGPSCLGVVNMIDGF 144 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 G PG+ GS+G++S+SG + + S LG S V G + G + D + Sbjct: 145 QAFGGHPGTEILPGSIGLVSQSGANVHSYIGAASARNLGFSYVVSSGNEA--GMDATDYI 202 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGH 256 + FL D T+ + E S++ E KP++ G++ R + H Sbjct: 203 DCFLRDPDTKVVCAYIESFKSSDALIR---VAEQALKVSKPLIVIKIGRSPSAVRAALAH 259 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 GA+ G D + ++ GI A + Sbjct: 260 TGAM--TGPDHYFDTL--FRQYGIIRANTIEE 287 >gi|187918807|ref|YP_001887838.1| CoA-binding domain-containing protein [Burkholderia phytofirmans PsJN] gi|187717245|gb|ACD18468.1| CoA-binding domain protein [Burkholderia phytofirmans PsJN] Length = 750 Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 91/277 (32%), Gaps = 27/277 (9%) Query: 25 TEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAG 84 + + + ++PK V ++A + ++I V Sbjct: 39 MRFLMQHGYQGTLYPVNPK------YAQIDGVACHDSIAALPS--TPDLALILVAARRVP 90 Query: 85 DAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSC 138 D + + E + + + G + R+IGPNC G ++ + Sbjct: 91 DMLRQCGEKGVGFAIVYSSGFAEAGEAGAALQRECADIAKAHGIRVIGPNCQGFVSTGAN 150 Query: 139 KI---GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 G G +R+G + ++S+SG + + G+G + G + +D Sbjct: 151 VYAGFGAPFGVAYRRGGLSLISQSGGFGCALLLMADELGIGLRHFITTGNEA--DVSLLD 208 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 ++ +AD T I E A KP++ + G TA + Sbjct: 209 LVNACIADPHTSLIATYIEGLKDA---GRLVDMANRALDAGKPLLAWKVGNTADGAK--- 262 Query: 256 HAGAVISGGKGGAED-KINAMKEAGICIAPSPARIGR 291 A A + GGA A ++ G+ A +G Sbjct: 263 -AAASHTANLGGASALYRTAFRQTGVIEVSDVADLGD 298 >gi|332283327|ref|YP_004415238.1| Acyl-CoA synthetase [Pusillimonas sp. T7-7] gi|330427280|gb|AEC18614.1| Acyl-CoA synthetase [Pusillimonas sp. T7-7] Length = 698 Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 99/276 (35%), Gaps = 28/276 (10%) Query: 27 QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA 86 + + ++P++ G P +VA E + +++ VP A +A Sbjct: 36 YMRRHGYRGKLYPVNPQRPQ---VQGEKTWP---SVASLPEAP--DLAIVAVPGMKAVEA 87 Query: 87 IIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKI 140 + + + + I+ G + + R ++ R++GPN G+ + I Sbjct: 88 VDDCAALGVKAAIVISAGFSEVGPEGRAVQDEMTRRARQAGLRIVGPNSQGLANFGTGAI 147 Query: 141 GIMPGSI----FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 + G V ++S+SG ++ Q G+G G + D+ Sbjct: 148 ASFSTMFLEIAPQDGPVAVISQSGGMSAMIYGVLRQRGIGVRHMHATGNEA--DITVADL 205 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGH 256 LAD +++ E S ++ A E R R PI+ AG++ R Sbjct: 206 ARAVLADPEVRIVLLYLE---SLQDAGALAEAAELARQRGVPIIAVKAGRSEAGLR---- 258 Query: 257 AGAVISGGKGGAEDKINA-MKEAGICIAPSPARIGR 291 A A +G + + A + GI A P + R Sbjct: 259 AAASHTGALANEDRAVQAFFEHHGILRARDPQELAR 294 >gi|229578739|ref|YP_002837137.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus Y.G.57.14] gi|228009453|gb|ACP45215.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus islandicus Y.G.57.14] Length = 660 Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 94/240 (39%), Gaps = 19/240 (7%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 V F ++ E + + +I VP + E +E + + IT G + +++ Sbjct: 53 GVKAFKSIKEIPD--DIDLGIITVPREIVPQVMEELVEKGVRASIVITAGFREVGEEKLE 110 Query: 115 AR----LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 K R++GPN GI+TP+ + ++G++G++ +SG L + Sbjct: 111 NEVIGIARKGGIRVLGPNTFGIITPE--FNATFTYTDVKRGNIGLVVQSGGLGVYMLNWA 168 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + +G S V +G + +V+ D T +I + E + FL+ Sbjct: 169 QKYRIGISYMVSLGNQA--DVKEYEVINYLSRDAETRAIFVYLEGVS----DGNAFLETL 222 Query: 231 AKRGRKKPIVGFVAG-KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + R+KP+V G + H G++ G E A+K G + + + Sbjct: 223 PEATRRKPVVFLKGGVTNSGASAAKTHTGSLA----GSFEVFKAAVKTVGGILVENLHDM 278 >gi|218782513|ref|YP_002433831.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218763897|gb|ACL06363.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 464 Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 101/281 (35%), Gaps = 25/281 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK F Q + Y ++P V + ++ + E + + Sbjct: 24 GKMPFFQFLQFMEYKGALY--PVNPA------HAEISGVKAYPSLDDVPE--TVDLVIAQ 73 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL----EKSSSRLIGPNCPGIL 133 +P A D + + P + T G + + ++ L S+ RL+GPNC G+L Sbjct: 74 IPARFAIDTVKAAGRNGAPFVHFFTSGFSEVGNMELEKELVETARASNVRLVGPNCIGVL 133 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 +S M KG+VG L +SG ++ V + + + AV G + Sbjct: 134 CAESRITFNMEFKPNGKGNVGFLGQSGGVSDNFVRMSGSRKIRLNKAVSYGNQA--DLKL 191 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR- 252 D L F D E+ + E + FL K KP++ G T + Sbjct: 192 EDFLAYFAEDPEIEAAAIYVEDV----KNGPAFLDALGKTTASKPVILLKGGSTQRGAKA 247 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 H GA+ G + +A+ + G I + ++ + Sbjct: 248 AASHTGAMA----GDFKIFSSAVNQKGGIIVDTFEQMMDLM 284 >gi|307274418|ref|ZP_07555602.1| putative membrane protein FdrA [Enterococcus faecalis TX2134] gi|306508928|gb|EFM78014.1| putative membrane protein FdrA [Enterococcus faecalis TX2134] gi|315036585|gb|EFT48517.1| putative membrane protein FdrA [Enterococcus faecalis TX0027] Length = 519 Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ + DE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|229547559|ref|ZP_04436284.1| FdrA family protein [Enterococcus faecalis TX1322] gi|229307332|gb|EEN73319.1| FdrA family protein [Enterococcus faecalis TX1322] gi|315030625|gb|EFT42557.1| putative membrane protein FdrA [Enterococcus faecalis TX4000] Length = 519 Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVNVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ +AD+ T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMADKQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|171317205|ref|ZP_02906405.1| GCN5-related N-acetyltransferase [Burkholderia ambifaria MEX-5] gi|171097636|gb|EDT42470.1| GCN5-related N-acetyltransferase [Burkholderia ambifaria MEX-5] Length = 785 Score = 88.9 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 54/285 (18%), Positives = 95/285 (33%), Gaps = 40/285 (14%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHP---KKGSTYWTGGNVNVPVFTTVAEAKERTAANAS 74 G G + + V ++P +P + + Sbjct: 25 GSIGAMVWARVLDGAFDGPVWPVNPKYRGLNGHAVVADVDRLPA-----------PPSVA 73 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV---RVKARLEKSSSRLIGPNCPG 131 VI PP+ + + E + V + E D R + R++GP G Sbjct: 74 VICTPPATWAGIVRKLGELGTRVAVIVGEARTDADRAALDRTLKAAKPFVLRIVGPGSLG 133 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 +L+P P R G V +S+S LT + GLG S V +G + Sbjct: 134 VLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWADARGLGFSHVVALGSEA--DV 191 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 + DVL+ +D T +I++ + + A +F+ R KP++ G+ A PG Sbjct: 192 DAGDVLDYLASDPGTRAILLELDTVCA----ARKFMSAARAAARNKPVLALRTGR-ADPG 246 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + A A + AG+ + + + L Sbjct: 247 DALYTA----------------AFQRAGMVRVDALDDLLDEIETL 275 >gi|167840791|ref|ZP_02467475.1| acetyltransferase, GNAT family protein [Burkholderia thailandensis MSMB43] Length = 787 Score = 88.9 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 61/294 (20%), Positives = 110/294 (37%), Gaps = 37/294 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 13 TSVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKVYPYVDQL 66 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV---RVKARLEKSSS 122 + +++ PP+ + + + + + E D V R A + Sbjct: 67 PSAPS--VALVCTPPATWPGIVRKLGGLGVRAAIIVGEARSSADQVALERALAAAKPYLL 124 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RL+GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 125 RLVGPGSLGVVSPALNAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D AT +I++ + S A +F+ R KP++ Sbjct: 185 LGGEA--DVDAADVLDYLASDAATRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 AG+ G +G ++ A + AG+ + + + L Sbjct: 239 RAGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEIETL 275 >gi|256854690|ref|ZP_05560054.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256710250|gb|EEU25294.1| conserved hypothetical protein [Enterococcus faecalis T8] Length = 524 Score = 88.9 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 106 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 164 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 165 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVNVQIHKYGYGI 221 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ +AD+ T++I+++ + E + LK A Sbjct: 222 SQLIGTGGRDLSAEIGGLMMLDGLDALMADKQTKAILLISKPPAPEVTE--KILKKLAVS 279 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 280 --TKPVVIYFIG 289 >gi|172064405|ref|YP_001812056.1| GCN5-related N-acetyltransferase [Burkholderia ambifaria MC40-6] gi|171996922|gb|ACB67840.1| GCN5-related N-acetyltransferase [Burkholderia ambifaria MC40-6] Length = 785 Score = 88.5 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 101/289 (34%), Gaps = 31/289 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + +AG+ G + P G+ V T V Sbjct: 15 VAVVGASSRAGSIGAMVWARVLDGAFDGPVWPVNPKYRELNGHA---VVTDVDRLPA--P 69 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV---RVKARLEKSSSRLIGP 127 + +VI PP+ + + E + V + E D R + R++GP Sbjct: 70 PSVAVICTPPATWAGIVRKLGELGTRVAVIVGEARTDADRAALDRTLKAAKPFVLRIVGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G+L+P P R G V +S+S LT + GLG S V +G + Sbjct: 130 GSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWADARGLGFSHVVALGSEA 189 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + DVL+ +D T +I++ + + A +F+ R KP++ G+ Sbjct: 190 --DVDAGDVLDYLASDPGTRAILLELDTVCA----ARKFMSAARAAARNKPVLALRTGR- 242 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A PG + A A + AG+ + + + L Sbjct: 243 ADPGDALYTA----------------AFQRAGMVRVDALDDLLDEIETL 275 >gi|256958296|ref|ZP_05562467.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256948792|gb|EEU65424.1| conserved hypothetical protein [Enterococcus faecalis DS5] Length = 524 Score = 88.5 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 106 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 164 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 165 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 221 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ + DE T++I+++ + E + LK A Sbjct: 222 SQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLISKPPAPEVTE--KILKKLAVS 279 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 280 --TKPVVIYFIG 289 >gi|307289754|ref|ZP_07569692.1| putative membrane protein FdrA [Enterococcus faecalis TX0411] gi|306499210|gb|EFM68687.1| putative membrane protein FdrA [Enterococcus faecalis TX0411] Length = 519 Score = 88.5 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ + DE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|293384349|ref|ZP_06630234.1| protein FdrA [Enterococcus faecalis R712] gi|293388414|ref|ZP_06632922.1| protein FdrA [Enterococcus faecalis S613] gi|312908550|ref|ZP_07767494.1| putative membrane protein FdrA [Enterococcus faecalis DAPTO 512] gi|312908980|ref|ZP_07767842.1| putative membrane protein FdrA [Enterococcus faecalis DAPTO 516] gi|291078341|gb|EFE15705.1| protein FdrA [Enterococcus faecalis R712] gi|291082189|gb|EFE19152.1| protein FdrA [Enterococcus faecalis S613] gi|310625517|gb|EFQ08800.1| putative membrane protein FdrA [Enterococcus faecalis DAPTO 512] gi|311290680|gb|EFQ69236.1| putative membrane protein FdrA [Enterococcus faecalis DAPTO 516] Length = 519 Score = 88.5 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ + DE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|229548128|ref|ZP_04436853.1| bacterial FdrA protein [Enterococcus faecalis ATCC 29200] gi|307274280|ref|ZP_07555481.1| putative membrane protein FdrA [Enterococcus faecalis TX0855] gi|312905322|ref|ZP_07764437.1| putative membrane protein FdrA [Enterococcus faecalis TX0635] gi|229306814|gb|EEN72810.1| bacterial FdrA protein [Enterococcus faecalis ATCC 29200] gi|306509053|gb|EFM78122.1| putative membrane protein FdrA [Enterococcus faecalis TX0855] gi|310631346|gb|EFQ14629.1| putative membrane protein FdrA [Enterococcus faecalis TX0635] gi|315160023|gb|EFU04040.1| putative membrane protein FdrA [Enterococcus faecalis TX0312] gi|315162501|gb|EFU06518.1| putative membrane protein FdrA [Enterococcus faecalis TX0645] gi|315578601|gb|EFU90792.1| putative membrane protein FdrA [Enterococcus faecalis TX0630] gi|323478952|gb|ADX78391.1| bacterial FdrA family protein [Enterococcus faecalis 62] gi|327536143|gb|AEA94977.1| FdrA protein [Enterococcus faecalis OG1RF] Length = 519 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ + DE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|297202889|ref|ZP_06920286.1| acyl-CoA synthetase [Streptomyces sviceus ATCC 29083] gi|297148240|gb|EFH28912.1| acyl-CoA synthetase [Streptomyces sviceus ATCC 29083] Length = 637 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 88/252 (34%), Gaps = 29/252 (11%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------L 108 +P +V + + +V+ VP + + E + +V ++ G Sbjct: 321 GIPAHRSVGDI--DGPVDVAVLAVPAEHVPEVVAECGAHGVQGLVVLSAGYAESGPEGRE 378 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + R+IGPN G++ PD + R G +G+ ++SG + Sbjct: 379 RQRELVRHARAYGMRIIGPNAFGVINTNPDVRLNASLAPETPRPGRIGLFAQSGAIGVAL 438 Query: 167 VFQTSQE------GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 + + + G ST V G DVL+ + D T+ ++M E G+ Sbjct: 439 LSRLHRRGGGVTGVTGVSTFVSSGNRA--DVSGNDVLQYWYDDPDTDVVLMYLESIGNP- 495 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +F + + KP+V T P G HA + +++AG+ Sbjct: 496 ---RKFTRLARRTAAAKPLVVVQGSGTTPQG----HAVRATRLPRATVSAL---LRQAGV 545 Query: 281 CIAPSPARIGRS 292 + + + Sbjct: 546 IQVDTITELVDT 557 >gi|29377471|ref|NP_816625.1| hypothetical protein EF3010 [Enterococcus faecalis V583] gi|29344938|gb|AAO82695.1| conserved hypothetical protein [Enterococcus faecalis V583] gi|315575021|gb|EFU87212.1| putative membrane protein FdrA [Enterococcus faecalis TX0309B] gi|315581093|gb|EFU93284.1| putative membrane protein FdrA [Enterococcus faecalis TX0309A] Length = 519 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ + DE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDTLMVDEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|126738923|ref|ZP_01754619.1| predicted Acetyl-CoA synthetase [Roseobacter sp. SK209-2-6] gi|126720104|gb|EBA16811.1| predicted Acetyl-CoA synthetase [Roseobacter sp. SK209-2-6] Length = 714 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 54/273 (19%), Positives = 102/273 (37%), Gaps = 25/273 (9%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P + + + +V E + + ++ P + + E I Sbjct: 39 YAGAIYPINPK---APEVLGLKAYPSVLEV--EGSIDVVLVCTPAKTLPAILAQCGEKGI 93 Query: 96 PLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR 149 P V + G A + + RL+GPN G+ + ++ Sbjct: 94 PGAVVLAAGFSETGPEGEAIAEATLAAAKAHNVRLVGPNTNGVFNLHNNMN-MVGVQDVE 152 Query: 150 KGSVGILSRSGTLTYEAVFQTSQE-GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 G++GI S+SG + V + + G+G S+ VG+G + L+ F D T++ Sbjct: 153 PGNIGICSQSGNMMLAFVTEAKRRGGVGFSSYVGVGNQ--LDVTLSEYLQYFADDADTKA 210 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGG 267 V E + FL + ++KP++ + +G+T H G++ S Sbjct: 211 PVFYVEGF----RDGRAFLDTCREVTQRKPVIIYKSGRTEAGQVAASSHTGSLASSFALT 266 Query: 268 AEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 +K+AG + +I S+ E L L Sbjct: 267 RGL----LKQAGATVVEQSDKI-LSIAEGLSKL 294 >gi|256825408|ref|YP_003149368.1| acyl-CoA synthetase (NDP forming) [Kytococcus sedentarius DSM 20547] gi|256688801|gb|ACV06603.1| acyl-CoA synthetase (NDP forming) [Kytococcus sedentarius DSM 20547] Length = 831 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 94/239 (39%), Gaps = 20/239 (8%) Query: 60 TTVAEAKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVR 112 TT +E T + ++I +P + + + + ++ ++ G Sbjct: 254 TTTPSVREVTGPIDLAIIALPADTVHEVVADCAAIGVRSVLVVSAGFAEAGPEGARRQRE 313 Query: 113 VKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 + + RL+GPN G+ P+ + R G G+ ++SG L Sbjct: 314 LLRLVHYHGMRLVGPNSYGLSNSSPEVSLNATLGAPSVR-GRFGLFAQSGALGVSVTQMA 372 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 Q G+G ST V G DV++ ++ D+ T ++ + E G+ A +F + Sbjct: 373 RQRGVGLSTFVSAGNRA--DVSGNDVMQYWMEDDDTAAVGLYLETLGN----ARKFFRIS 426 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + KKPI+ +G + G GH +I + E ++++GI + ++ Sbjct: 427 QRLSAKKPIIAIKSGTS-GYGVPPGH---LIRRSRARPEALDAMLRQSGIIRVSNLHQM 481 >gi|294780146|ref|ZP_06745518.1| bacterial FdrA protein [Enterococcus faecalis PC1.1] gi|307268423|ref|ZP_07549801.1| putative membrane protein FdrA [Enterococcus faecalis TX4248] gi|294452689|gb|EFG21119.1| bacterial FdrA protein [Enterococcus faecalis PC1.1] gi|306515230|gb|EFM83767.1| putative membrane protein FdrA [Enterococcus faecalis TX4248] Length = 519 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ + DE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|255970784|ref|ZP_05421370.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|256962860|ref|ZP_05567031.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|255961802|gb|EET94278.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|256953356|gb|EEU69988.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] Length = 524 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 106 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 164 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 165 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 221 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ + DE T++I+++ + E + LK A Sbjct: 222 SQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLISKPPAPEVTE--KILKKLAVS 279 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 280 --TKPVVIYFIG 289 >gi|256960376|ref|ZP_05564547.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|256950872|gb|EEU67504.1| conserved hypothetical protein [Enterococcus faecalis Merz96] Length = 524 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 106 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 164 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 165 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 221 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ + DE T++I+++ + E + LK A Sbjct: 222 SQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLISKPPAPEVTE--KILKKLAVS 279 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 280 --TKPVVIYFIG 289 >gi|257078395|ref|ZP_05572756.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|256986425|gb|EEU73727.1| conserved hypothetical protein [Enterococcus faecalis JH1] Length = 524 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 106 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 164 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 165 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 221 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ + DE T++I+++ + E + LK A Sbjct: 222 SQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLISKPPAPEVTE--KILKKLAVS 279 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 280 --TKPVVIYFIG 289 >gi|257091263|ref|ZP_05585624.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257000075|gb|EEU86595.1| conserved hypothetical protein [Enterococcus faecalis CH188] Length = 524 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 106 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 164 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 165 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 221 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ + DE T++I+++ + E + LK A Sbjct: 222 SQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLISKPPAPEVTE--KILKKLAVS 279 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 280 --TKPVVIYFIG 289 >gi|257080574|ref|ZP_05574935.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|256988604|gb|EEU75906.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] Length = 524 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 106 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 164 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++GP+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 165 HEKELFVMGPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 221 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ + DE T++I+++ + E + LK A Sbjct: 222 SQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLISKPPAPEVTE--KILKKLAVS 279 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 280 --TKPVVIYFIG 289 >gi|1653989|emb|CAA70288.1| succinyl coenzyme A synthetase alpha subunit [Drosophila melanogaster] Length = 110 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 43/85 (50%), Positives = 61/85 (71%), Gaps = 5/85 (5%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++ +++V+ QG TGK GTFH++QA+ Y T++VGGI PKKG T G +PVF + Sbjct: 31 NLKLNGDSRVICQGFTGKQGTFHSQQALEY-GTKLVGGISPKKGGTQHLG----LPVFAS 85 Query: 62 VAEAKERTAANASVIYVPPSGAGDA 86 VAEAK+ T +A+VIYVPP GA A Sbjct: 86 VAEAKKATDPHATVIYVPPPGAAAA 110 >gi|284174581|ref|ZP_06388550.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein [Sulfolobus solfataricus 98/2] Length = 319 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 94/240 (39%), Gaps = 19/240 (7%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 V F +V E + + +I VP + E +E + + IT G + +++ Sbjct: 53 GVKAFKSVKEIPD--DIDLGIITVPREIVPQVMEELVEKGVRASIVITAGFREVGEEKLE 110 Query: 115 AR----LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 K R++GPN GI+TP+ + ++G++G++ +SG L + Sbjct: 111 NEVIGIARKGGIRVLGPNTFGIITPE--FNATFTYTDVKRGNIGLVVQSGGLGVYMLNWA 168 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + +G S V +G + +V+ D T +I + E + FL+ Sbjct: 169 QKYRIGISYMVSLGNQA--DVKEYEVINYLSRDAETRAIFVYLEGVS----DGNAFLETL 222 Query: 231 AKRGRKKPIVGFVAG-KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + R+KP+V G + H G++ G E A+K G + + + Sbjct: 223 PEATRRKPVVFLKGGVTNSGASAAKTHTGSLA----GSFEVFKAAVKTVGGILVENLHDM 278 >gi|302554642|ref|ZP_07306984.1| acyl-CoA synthetase [Streptomyces viridochromogenes DSM 40736] gi|302472260|gb|EFL35353.1| acyl-CoA synthetase [Streptomyces viridochromogenes DSM 40736] Length = 941 Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 87/249 (34%), Gaps = 27/249 (10%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI----PV--L 108 VP +V + + +V+ VP + + E E + +V ++ G P Sbjct: 260 GVPAHRSVRDI--DGPVDLAVVAVPAEHVPEIVTECGEHGVQGLVVVSAGYADSGPEGRE 317 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + R+IGPN GI+ P + R G +G+ ++SG + Sbjct: 318 RQRALVRHARTYGMRIIGPNAFGIINTSPQVRLNASLAPETPRPGRIGLFAQSGAIGIAL 377 Query: 167 VFQTSQE------GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 + + + G ST V G D+L+ + D T+ ++M E G+ Sbjct: 378 LSRLHRRGGGVTGVTGVSTFVSSGNRA--DVSGNDLLQYWYEDPDTDVVLMYLESIGNP- 434 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +F + + KP+V + A GHA +++AG+ Sbjct: 435 ---RKFTRLARRTAAAKPLVVVQGARHA--AAPQGHAVRATRLPHATVSAL---LRQAGV 486 Query: 281 CIAPSPARI 289 + + Sbjct: 487 IRVDTITDL 495 >gi|325963000|ref|YP_004240906.1| acyl-CoA synthetase (NDP forming) [Arthrobacter phenanthrenivorans Sphe3] gi|323469087|gb|ADX72772.1| acyl-CoA synthetase (NDP forming) [Arthrobacter phenanthrenivorans Sphe3] Length = 900 Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 87/231 (37%), Gaps = 24/231 (10%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP------VLDMVRVKARLEKSSSR 123 +V+ VP + + A + +V + G +L + + + R Sbjct: 261 RVQLAVVAVPYEEVSAVVADCAAAGVKGLVIASAGFADDGERGLLRQRDLVRQARANGMR 320 Query: 124 LIGPNCPGIL--TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +IGP GI+ PD M ++ +G +G+ S+S + +S+ LG ST + Sbjct: 321 VIGPASLGIVNTHPDVSLNASMAPTLPLRGGLGLFSQSAAIGVSLYAASSRRRLGLSTFL 380 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G D+++ + D T ++ + E G+ +F + + R KP++ Sbjct: 381 SAGNRA--DVSGNDMMQYWEDDSDTSAVGLYLESIGNP----RKFSRLARRLARIKPVIV 434 Query: 242 FVA---GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + G PPG + A ++++G+ + ++ Sbjct: 435 AKSDAMGLRLPPGHAVRTTQAPAGALD-------AMLRQSGVIRVETIEQL 478 >gi|270265376|ref|ZP_06193637.1| hypothetical protein SOD_m01080 [Serratia odorifera 4Rx13] gi|270040780|gb|EFA13883.1| hypothetical protein SOD_m01080 [Serratia odorifera 4Rx13] Length = 882 Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 95/286 (33%), Gaps = 37/286 (12%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA------- 70 G+AG + + V + P+ + V Sbjct: 25 GRAGNLMMSNLLAGGFSGPVMPVTPR---------------YKAVCGVMAYPDVASLPLT 69 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + +++ I + + ++ P +KA ++ S RL+GPN Sbjct: 70 PDLAILCTHAQRNLALIEALGKRGCKTAIVLSS--PPEQFAELKACAQRYSMRLLGPNSL 127 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G+L P KG + +S+S + + Q +G S + +G Sbjct: 128 GLLAPWQGLNASFSPVPILKGKLAFISQSAAVANTILDWAQQREVGFSYFIALGDSLDID 187 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 + + L+ D T +I++ E +A +FL R KPI+ +G++ Sbjct: 188 VDDL--LDFLARDSKTSAILLYLENIS----DARRFLSASRSASRNKPILVIKSGRSQ-- 239 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A +++ +G A++ AG+ + ++ L Sbjct: 240 -----QAQLLLNSQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|126651200|ref|ZP_01723410.1| putative oxidoreductase subunit [Bacillus sp. B14905] gi|126592038|gb|EAZ86104.1| putative oxidoreductase subunit [Bacillus sp. B14905] Length = 517 Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 15/228 (6%) Query: 59 FTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A + AN +VI V + A +++E ++ ++ ++ + V D V +K Sbjct: 102 YATIDSAAQGIPDANFAVISVNGAFAVREARKALENDLH-VMLFSDNVSVEDEVELKTLA 160 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 ++GP+C + IG+ + RKGS+GI++ SGT + E + G G Sbjct: 161 HDKGLLMMGPDCGTAII---SNIGLAFANAVRKGSIGIVAASGTGSQEVSVRIHDFGGGI 217 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIG-GSAEEEAAQFLKDEAK 232 + +G GG V G +D ++ ADEAT+ IV+V + S E++ +K+ Sbjct: 218 TQLIGTGGRDLSKEVGGIMMLDGIQALDADEATKVIVLVSKPPEASVEKKVLAQIKEC-- 275 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 KP+V + G G A S + + EAGI Sbjct: 276 ---SKPVVVYFIGGNEEAVIAAGGHFAKTSKEAALQAVLLAGIDEAGI 320 >gi|313245433|emb|CBY40167.1| unnamed protein product [Oikopleura dioica] Length = 96 Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 5/78 (6%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ + +TKV+VQG TGK GT+H+EQAI Y T VVGG+ P KG G VPVF + Sbjct: 24 NLKIGADTKVIVQGFTGKQGTYHSEQAIAY-GTHVVGGVTPGKGGQEHLG----VPVFNS 78 Query: 62 VAEAKERTAANASVIYVP 79 VA+A++ T A+A+VIYVP Sbjct: 79 VADARKGTGADATVIYVP 96 >gi|90577829|ref|ZP_01233640.1| putative acetyltransferase [Vibrio angustum S14] gi|90440915|gb|EAS66095.1| putative acetyltransferase [Vibrio angustum S14] Length = 912 Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 105/295 (35%), Gaps = 42/295 (14%) Query: 34 TQVVGGIHPKKGS----------TYWTGGNVNVPVFTTVAEAKERTA-------ANASVI 76 T + +P + + P + VA + +++ Sbjct: 14 TVIGASDNPSRAGNVVIRNLLSDQFRGPIMPVTPKYDAVAGILAYPDIASLPRVPDLAIV 73 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGI--PVLD------------MVRVKARLEKSSS 122 D + + + + + + G+ P L ++ A+ ++ Sbjct: 74 CTRAELNIDIVEQLGKKGVKAAIILAAGMNNPQLTPAPFTPNYQPSLEDQMLAKAKEYGM 133 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPN G++ P KG++ +S+S + + + +G ST + Sbjct: 134 RLIGPNSMGLILPWLNLNASFSPISANKGNIAFISQSAAVCTTILDWAKNKSIGFSTFLS 193 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G F ++L+ D TE+I++ + ++A +F+ R + I+ Sbjct: 194 LG--DACDINFAELLDTLCQDSKTEAILLYIDSV----KDARRFMSAARAAARNRRILVL 247 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVEL 296 +G+T + A + +GG G + A++ +G+ + + ++ L Sbjct: 248 KSGRT----QAGSSAAHIHTGGDIGLDAVYDAAIRRSGMLRVNNTHELFAAVETL 298 >gi|92114027|ref|YP_573955.1| CoA-binding [Chromohalobacter salexigens DSM 3043] gi|91797117|gb|ABE59256.1| CoA-binding protein [Chromohalobacter salexigens DSM 3043] Length = 915 Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 83/234 (35%), Gaps = 17/234 (7%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR--------VKARLEKSSS 122 + +++ P G +I + + + ++ G + D + + +S Sbjct: 71 PDLAILCNPVEGVPRSIEALGKLGVRAALVLSGGSYLDDRTQDGGSLRERMLKAARRSGI 130 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP C GI+ P + G V L +SG L + + G+G S V Sbjct: 131 RVLGPECLGIVVPGKKLNATYASQPIKAGRVAYLGQSGMLGNAMIDWAAGRGIGFSHLVT 190 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G D+++ T ++++ E +A F+ R + ++ Sbjct: 191 LGDS--VDVMLSDLMDYINQYSPTRALLLHLERV----HDAQHFMTALRDASRNRLVLAI 244 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +G++A ++ G A+ AG+ + + +L L Sbjct: 245 KSGRSA---QSTLDHETQTPGIDNRDVVFDAALARAGVVRVDNSDELFDALETL 295 >gi|257076261|ref|ZP_05570622.1| acyl-CoA synthetase [Ferroplasma acidarmanus fer1] Length = 657 Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 103/274 (37%), Gaps = 24/274 (8%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 + G ++P T + + ++ + KE + + VI VP + ++ Sbjct: 32 TSSFSGKVYPVNNKT---ASIDGLTAYKSLIDIKE--SVDLVVIVVPRDAVPGVMKDAAT 86 Query: 93 AEIPLIVCITEGIPVLDM------VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGS 146 + V IT G D ++ A ++S R++GPN G++TPD + Sbjct: 87 IKAGAAVIITSGFKETDQHGAELEDQIMAIAKESGIRVLGPNTIGLITPDV--NATFAFA 144 Query: 147 IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 ++G ++++SG L + + +G S + +G + D + D T Sbjct: 145 DVKRGKAALVAQSGGLGVYMLNWAQESNVGISYFISLGNQA--DVDETDAFQFLSTDVET 202 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKG 266 +I E S + +FL ++KPI+ G G+T A +G Sbjct: 203 RAIFSYVEGVSSGQ----KFLSTLPDVIKRKPIIFLKGG----MGKTGAAAVKTHTGSVA 254 Query: 267 GAEDKI-NAMKEAGICIAPSPARIGRSLVELLGS 299 G+ D A++ G + + +L S Sbjct: 255 GSMDIFRAAVRTVGGIFVDNIEDMLNLAKIVLSS 288 >gi|296534085|ref|ZP_06896592.1| 6-carboxyhexanoate-CoA ligase [Roseomonas cervicalis ATCC 49957] gi|296265581|gb|EFH11699.1| 6-carboxyhexanoate-CoA ligase [Roseomonas cervicalis ATCC 49957] Length = 711 Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 100/292 (34%), Gaps = 29/292 (9%) Query: 11 VLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 V V G +G + G + ++PK G +P F +VAE E Sbjct: 26 VAVIGASGDATRIGGRPIAYMQSLGYQGRILPVNPK------HGMVQGLPAFASVAELPE 79 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSS 121 A VP + AG A+ + E + + + G + R+ A Sbjct: 80 VPEAAII--AVPAAAAGPALQQLAERGVKAAIMFSAGFAEMGEAGEAEQDRMVAAARAHG 137 Query: 122 SRLIGPNCPGILTPDSCKIGIMPGS----IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 RL+GPNC G+ + G S + G +GI S+SG GLG Sbjct: 138 MRLLGPNCLGLFNARTGFYGTFTSSLERGTPKPGPIGIASQSGAYGMHLFGLARDHGLGL 197 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 S V G + ++ D TE I E AE A E R +K Sbjct: 198 SCVVTTGNEA--DLNVGHMIGWMAQDPDTEVIAAYAEGIRDAESFLAAL---ELARRNRK 252 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 P+V G++A A I+G + + E G+ A + + Sbjct: 253 PVVMMKVGRSAVGSAAARSHTASIAGDDAVTDAVLA---EYGVVRARTTEEM 301 >gi|269119410|ref|YP_003307587.1| FdrA family protein [Sebaldella termitidis ATCC 33386] gi|268613288|gb|ACZ07656.1| FdrA family protein [Sebaldella termitidis ATCC 33386] Length = 573 Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 13/204 (6%) Query: 47 TYWTGGNVNVPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI 105 +PV T A + AN ++I +P A + +++E + + ++ + Sbjct: 90 QSSKSKGKKIPVARTWDSALRKLPDANLAIISIPGEYAAEETSKALEKGLN-VFLFSDNV 148 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 + D R+K ++GP+C + + + ++ KG++GI+ SGT E Sbjct: 149 SIEDEKRIKEEARTKGLLVMGPDCGTGIIGG---LPLAFANVIEKGNIGIVGASGTGIQE 205 Query: 166 AVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 S++G G + A+G GG ++ I+ L+L ADE T+ IV + + Sbjct: 206 ISTIISRKGYGITQAIGTGGRDLSAQIEAVTAIEALKLLAADEDTDVIVFISKPPAPEVR 265 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAG 245 + + ++ G KP+V G Sbjct: 266 D--KVIETFKILG--KPVVANFLG 285 >gi|33598404|ref|NP_886047.1| hypothetical protein BPP3897 [Bordetella parapertussis 12822] gi|33574533|emb|CAE39180.1| conserved hypothetical protein [Bordetella parapertussis] Length = 819 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 89/242 (36%), Gaps = 28/242 (11%) Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-----PVLDMVRVKAR 116 A E + +++ V G + + A P V + P +A Sbjct: 54 CAGVAEGQRPDLALVCV-APGVLPETLRRLAALAPRAVILLPHELPDPYPRGTQALCRAW 112 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 ++ L+GP G P + S+ R G V ++++S ++ + +G Sbjct: 113 AAENRCELLGPRSFGAQRPHAGLNLSQHPSLARAGRVALVAQSRSIMAAVMDWAEDVHIG 172 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S AV +G + V G VL+ +D T+SIV+ E G A +F+ Sbjct: 173 FSIAVSLGDEAVVGLS--QVLDYLASDSRTDSIVLYIEDVGP----AREFMSALRAAASV 226 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 KP++ AG+ + G D A++ AG ++ ++ ++ Sbjct: 227 KPVIVLKAGR-------------ADANGVDAVFD--AALRRAGAVRVRYFVQLFSAV-KV 270 Query: 297 LG 298 LG Sbjct: 271 LG 272 >gi|227511403|ref|ZP_03941452.1| membrane protein [Lactobacillus buchneri ATCC 11577] gi|227085354|gb|EEI20666.1| membrane protein [Lactobacillus buchneri ATCC 11577] Length = 587 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 47/208 (22%), Positives = 84/208 (40%), Gaps = 14/208 (6%) Query: 43 KKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCIT 102 K + V + E + A ++I VP A + ++++A + C + Sbjct: 91 GKAGNENETADERVKTWDKALELGK--DAPVALISVPGVYAAVEVEKALDAG-KNVFCFS 147 Query: 103 EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTL 162 + + + D R+K + L+GP+C + I + + RKGS+G++ SGT Sbjct: 148 DNVSMEDEARLKQMAHEKGLVLMGPDCGTGIANG---IPLAFANRVRKGSIGMVGASGTG 204 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGS 218 E + G G + A+G GG ++GT F D + L D + IV + + Sbjct: 205 IQEVSTIIHKLGAGVTNAIGTGGRDLKADIQGTTFKDSVALLDQDPDVKVIVAISKPPAP 264 Query: 219 AEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 + L R KP+V G+ Sbjct: 265 EVRDDVLSL----LRATNKPVVAIFLGE 288 >gi|170702027|ref|ZP_02892945.1| GCN5-related N-acetyltransferase [Burkholderia ambifaria IOP40-10] gi|170133064|gb|EDT01474.1| GCN5-related N-acetyltransferase [Burkholderia ambifaria IOP40-10] Length = 785 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 101/289 (34%), Gaps = 31/289 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + +AG+ G + P G+ V T V Sbjct: 15 VAVVGASSRAGSIGAMVWARVLDGAFDGPVWPVNPKYRELNGHA---VVTDVDRLPA--P 69 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV---RVKARLEKSSSRLIGP 127 + +VI PP+ + + E + V + E D R + R++GP Sbjct: 70 PSVAVICTPPATWAGIVRKLGELGTRVAVIVGEARTDADRAALDRTLKAAKPFVLRIVGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G+L+P P R G V +S+S LT + GLG S V +G + Sbjct: 130 GSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWAGARGLGFSHVVALGSEA 189 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + DVL+ +D T +I++ + + A +F+ R KP++ G+ Sbjct: 190 --DVDAGDVLDYLASDPGTRAILLELDTVCA----ARKFMSAARAAARNKPVLALRTGR- 242 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A PG + A A + AG+ + + + L Sbjct: 243 ADPGDALYTA----------------AFQRAGMVRVDALDDLLDEIETL 275 >gi|134278418|ref|ZP_01765132.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 305] gi|134250202|gb|EBA50282.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 305] Length = 787 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 111/296 (37%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 13 TSVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKVYPYVDQL 66 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + ++I PP+ + + + + I E G + R A + Sbjct: 67 PSAPS--VALICTPPATWPGIVRKLGGLGVRAAIIIGEARSGADRAALERALAAAKPYLL 124 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 125 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 185 LGGEA--DVDAADVLDYLASDAETRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G +G ++ A + AG+ + + + E LG Sbjct: 239 RAGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEI-EALG 276 >gi|121597730|ref|YP_991148.1| acetyltransferase [Burkholderia mallei SAVP1] gi|124381731|ref|YP_001025540.1| acetyltransferase [Burkholderia mallei NCTC 10229] gi|121225528|gb|ABM49059.1| acetyltransferase, GNAT family [Burkholderia mallei SAVP1] gi|261826473|gb|ABM99802.2| acetyltransferase, GNAT family [Burkholderia mallei NCTC 10229] Length = 803 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 111/296 (37%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 29 TSVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKVYPYVDQL 82 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + ++I PP+ + + + + + E G + R A + Sbjct: 83 PSAPS--VALICTPPATWPGIVRKLGGLGVRAAIIVGEARSGADRAALERALAAAKPYLL 140 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 141 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 200 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 201 LGGEA--DVDAADVLDYLASDAETRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 254 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G +G ++ A + AG+ + + + E LG Sbjct: 255 RAGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEI-EALG 292 >gi|126446526|ref|YP_001077607.1| acetyltransferase [Burkholderia mallei NCTC 10247] gi|254177172|ref|ZP_04883828.1| acetyltransferase, GNAT family [Burkholderia mallei ATCC 10399] gi|126239380|gb|ABO02492.1| acetyltransferase, GNAT family [Burkholderia mallei NCTC 10247] gi|160698212|gb|EDP88182.1| acetyltransferase, GNAT family [Burkholderia mallei ATCC 10399] Length = 787 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 111/296 (37%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 13 TSVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKVYPYVDQL 66 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + ++I PP+ + + + + + E G + R A + Sbjct: 67 PSAPS--VALICTPPATWPGIVRKLGGLGVRAAIIVGEARSGADRAALERALAAAKPYLL 124 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 125 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 185 LGGEA--DVDAADVLDYLASDAETRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G +G ++ A + AG+ + + + E LG Sbjct: 239 RAGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEI-EALG 276 >gi|283850960|ref|ZP_06368245.1| CoA-binding domain protein [Desulfovibrio sp. FW1012B] gi|283573606|gb|EFC21581.1| CoA-binding domain protein [Desulfovibrio sp. FW1012B] Length = 907 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 81/236 (34%), Gaps = 30/236 (12%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA--- 115 + +V + VI P + + + + V + G + +A Sbjct: 60 YKSVDTLP--LTPDLGVIATDPESVPEYLRDLGRRGVGAAVVLPPGWAKMPREAKRALQE 117 Query: 116 ----RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 S R++GP+ G++ P + S G + +S+S +L + Sbjct: 118 RMLEAAAPSGIRILGPSGLGLVVPGIGLNCSLASSDALPGRIAFISQSASLFSAVLDWAR 177 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 +G+G S + +G ++ D+L+ D T SI++ E +A F+ Sbjct: 178 TKGIGFSHILSLGDR--VDLKYADILDYMAQDPNTRSILLYVESIT----DARSFMSASR 231 Query: 232 KRGRKKPIVGFVAGKT----APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 R KP++ G+ PP +G E A + AG+ Sbjct: 232 AAARNKPVLVIKPGRRLWSVFPP-----------DPDEGRDEVYDEAFRRAGMLRV 276 >gi|289705454|ref|ZP_06501848.1| CoA binding domain protein [Micrococcus luteus SK58] gi|289557839|gb|EFD51136.1| CoA binding domain protein [Micrococcus luteus SK58] Length = 100 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 6/83 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYW-----TGGNVN 55 MSI ++K++KV+VQG+TG GT HT + +L T +VGG++ +K T G V Sbjct: 1 MSIYLNKDSKVIVQGITGGEGTKHT-RLMLKAGTNIVGGVNARKAGTTVSHEDKDGNAVE 59 Query: 56 VPVFTTVAEAKERTAANASVIYV 78 +PVF TV EA E+T A+ SV +V Sbjct: 60 LPVFGTVKEAMEKTGADVSVAFV 82 >gi|157382780|gb|ABV48827.1| ATP citrate lyase alpha subunit [Sulfurimonas autotrophica] Length = 325 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 6/117 (5%) Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 G+ FID L + + ++++GE+GG+ E + + +K KPI+ + G Sbjct: 1 RFVGSVFIDNLLRMEKNPDVKYMILLGEVGGTEEYKVIEAVK---SGKITKPIIAWCIGT 57 Query: 247 TAP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 A G GHAGA + + AE K AM EAGI + + + +++E+ L Sbjct: 58 IAKYYDSGVQFGHAGASANAERETAEAKNKAMAEAGIHVPATFNDLPATIMEVYDDL 114 >gi|254203112|ref|ZP_04909474.1| acetyltransferase, GNAT family [Burkholderia mallei FMH] gi|147746157|gb|EDK53235.1| acetyltransferase, GNAT family [Burkholderia mallei FMH] Length = 803 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 111/296 (37%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 29 TSVAVVGASPRPGSVGAMVWACVLDGRFSGAIWPVNPK------YGELNGHKVYPYVDQL 82 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + ++I PP+ + + + + + E G + R A + Sbjct: 83 PSAPS--VALICTPPATWPGIVRKLGGLGVRAAIIVGEARSGADRAALERALAAAKPYLL 140 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 141 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 200 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 201 LGGEA--DVDAADVLDYLASDAETRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 254 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G +G ++ A + AG+ + + + E LG Sbjct: 255 RAGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEI-EALG 292 >gi|149907924|ref|ZP_01896592.1| Hypothetical protein yfiQ [Moritella sp. PE36] gi|149808930|gb|EDM68861.1| Hypothetical protein yfiQ [Moritella sp. PE36] Length = 817 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 74/232 (31%), Gaps = 18/232 (7%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR----LEKSSSRLIG 126 + I P + E E ++ ++ P + K + R++G Sbjct: 70 PDLGAICTPIRFVAKIVKELGEVGCKAVILFSD-EPYEGNADTWEKIGLIAAKYNIRVLG 128 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+ G+L P + G V ++S+S + G+G S + IG Sbjct: 129 PSSLGVLNPRLKLNVSLAHVAPPAGDVAVISQSAAFATSMIDWAETRGVGFSCFISIGTR 188 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 F D+++ D T+SI + + + +F+ KKPIV + Sbjct: 189 --IDVNFADLIDYLSRDRFTKSIALYVDNI----IDTRRFMSAARAAAFKKPIVVVRSSS 242 Query: 247 TAPPGRTMGH--AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + A A + +G+ + ++ + Sbjct: 243 NIGGATALLQDRRNKISYNTAYTA-----AFQRSGMLRVNDTFELLSAIKTI 289 >gi|53716388|ref|YP_105168.1| acetyltransferase [Burkholderia mallei ATCC 23344] gi|254208446|ref|ZP_04914795.1| acetyltransferase, GNAT family [Burkholderia mallei JHU] gi|52422358|gb|AAU45928.1| acetyltransferase, GNAT family [Burkholderia mallei ATCC 23344] gi|147751133|gb|EDK58201.1| acetyltransferase, GNAT family [Burkholderia mallei JHU] Length = 787 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 111/296 (37%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 13 TSVAVVGASPRPGSVGAMVWACVLDGRFSGAIWPVNPK------YGELNGHKVYPYVDQL 66 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + ++I PP+ + + + + + E G + R A + Sbjct: 67 PSAPS--VALICTPPATWPGIVRKLGGLGVRAAIIVGEARSGADRAALERALAAAKPYLL 124 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 125 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 185 LGGEA--DVDAADVLDYLASDAETRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G +G ++ A + AG+ + + + E LG Sbjct: 239 RAGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEI-EALG 276 >gi|269137915|ref|YP_003294615.1| CoA binding domain/acetyltransferase domain protein [Edwardsiella tarda EIB202] gi|267983575|gb|ACY83404.1| CoA binding domain/acetyltransferase domain protein [Edwardsiella tarda EIB202] gi|304557967|gb|ADM40631.1| Protein acetyltransferase [Edwardsiella tarda FL6-60] Length = 890 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 96/278 (34%), Gaps = 23/278 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 ++G + + + P+ V + T+A+ + +++ Sbjct: 26 RSGHLVMLNLLNGGFPGPIMPVTPR------YQAVCGVLAYPTIADLPCVP--DLAILCT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 I E + I P +++ + RL+GPN G+L P Sbjct: 78 NAQRTPALIAELGAKGCRAAIVIAA--PASQADALRSLALRHGVRLLGPNSLGLLAPWQK 135 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 G + +S+S ++ + Q +G S V +G + + L+ Sbjct: 136 LNASFSPVPILPGRLAFISQSAAVSNTILDWARQREIGFSLFVALGDSLDTDVDDL--LD 193 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E +A +FL R KPI+ +G++ R +G A Sbjct: 194 YLARDAKTSAILLYLEHL----HDARRFLSAARSAARNKPILVIKSGRSPQARRVLGEAA 249 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G A D A++ AG+ + + ++ L Sbjct: 250 -----GLDIAYD--AAIQRAGLLRVQNTHELFSAVETL 280 >gi|328885501|emb|CCA58740.1| acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative [Streptomyces venezuelae ATCC 10712] Length = 714 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 53/285 (18%), Positives = 97/285 (34%), Gaps = 34/285 (11%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G G + + Y + ++P+ + VP + +V +A + ++I Sbjct: 23 GALGRKPLDYLLRYGYKGRILPVNPRSP------EILGVPAYPSVKDAP--GPVDLALIM 74 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPG 131 V A+ + + A + L V + G V A+ R+IGPNC G Sbjct: 75 VSAERVLGAVDDCVAAGVKLAVIASSGFAETGEEGARLQAEVVAKARAGGLRIIGPNCIG 134 Query: 132 ILTPDSCKIGIMP------GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 + ++ + F G++ +S+SG L + A + GL V G Sbjct: 135 AVGYENRVLATFSPLFGAESVPFEPGTLAFVSQSGALGFGAASLALERGLRPGWVVSTGN 194 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 D ++VL ++ E+ A G KP+ +G Sbjct: 195 DA--DVTALEVLRELATVPDVTGLLGYL-------EDTPDIDTLRALAGSGKPVALLKSG 245 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARI 289 +T GR A A +G + + A++ GI + Sbjct: 246 RTEAGGR----AAASHTGALATDDRVLDAALRGLGIVRVDDIDEL 286 >gi|251768286|ref|ZP_02270153.2| acetyltransferase, GNAT family [Burkholderia mallei PRL-20] gi|254184466|ref|ZP_04891055.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 1655] gi|184215058|gb|EDU12039.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 1655] gi|243060287|gb|EES42473.1| acetyltransferase, GNAT family [Burkholderia mallei PRL-20] Length = 853 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 111/296 (37%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 79 TSVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKVYPYVDQL 132 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + ++I PP+ + + + + + E G + R A + Sbjct: 133 PSAPS--VALICTPPATWPGIVRKLGGLGVRAAIIVGEARSGADRAALERALAAAKPYLL 190 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 191 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 250 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 251 LGGEA--DVDAADVLDYLASDAETRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 304 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G +G ++ A + AG+ + + + E LG Sbjct: 305 RAGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEI-EALG 342 >gi|254300769|ref|ZP_04968213.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 406e] gi|157811321|gb|EDO88491.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 406e] Length = 853 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 111/296 (37%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 79 TSVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKVYPYVDQL 132 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + ++I PP+ + + + + + E G + R A + Sbjct: 133 PSAPS--VALICTPPATWPGIVRKLGGLGVRAAIIVGEARSGADRAALERALAAAKPYLL 190 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 191 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 250 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 251 LGGEA--DVDAADVLDYLASDAETRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 304 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G +G ++ A + AG+ + + + E LG Sbjct: 305 RAGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEI-EALG 342 >gi|167744079|ref|ZP_02416853.1| acetyltransferase, GNAT family protein [Burkholderia pseudomallei 14] Length = 853 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 111/296 (37%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 79 TSVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKVYPYVDQL 132 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + ++I PP+ + + + + + E G + R A + Sbjct: 133 PSAPS--VALICTPPATWPGIVRKLGGLGVRAAIIVGEARSGADRAALERALAAAKPYLL 190 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 191 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 250 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 251 LGGEA--DVDAADVLDYLASDAETRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 304 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G +G ++ A + AG+ + + + E LG Sbjct: 305 RAGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEI-EALG 342 >gi|254193892|ref|ZP_04900324.1| acetyltransferase, GNAT family [Burkholderia pseudomallei S13] gi|169650643|gb|EDS83336.1| acetyltransferase, GNAT family [Burkholderia pseudomallei S13] Length = 941 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 111/296 (37%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 167 TSVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKVYPYVDQL 220 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + ++I PP+ + + + + + E G + R A + Sbjct: 221 PSAPS--VALICTPPATWPGIVRKLGGLGVRAAIIVGEARSGADRAALERALAAAKPYLL 278 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 279 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 338 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 339 LGGEA--DVDAADVLDYLASDAETRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 392 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G +G ++ A + AG+ + + + E LG Sbjct: 393 RAGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEI-EALG 430 >gi|330448333|ref|ZP_08311981.1| acetyltransferase family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492524|dbj|GAA06478.1| acetyltransferase family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 912 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 43/273 (15%), Positives = 99/273 (36%), Gaps = 32/273 (11%) Query: 46 STYWTGGNVNVPVFTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLI 98 + P + VA + +V+ D + + + + Sbjct: 36 GQFRGPIMPVTPKYDAVAGILAYPDIASLPRVPDLAVVCTRAELNVDIVEQLGKKGVKAA 95 Query: 99 VCITEGI--PVLDM------------VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP 144 + + G+ P L ++ A+ ++ RLIGPN G++ P Sbjct: 96 IILAAGMNNPQLHTNPFSQNHQPSLEAQMLAKAKEYDMRLIGPNSMGLILPWLNLNASFS 155 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 KG + +S+S + + + +G ST + +G F ++L+ D Sbjct: 156 PISANKGKIAFISQSAAVCTTILDWAKNKSIGFSTFLSLG--DACDINFAELLDTLCQDS 213 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 T++I++ + ++A +F+ R + I+ +G+T + A + +GG Sbjct: 214 KTDAILLYIDSV----KDARRFMSAARAAARNRRILVLKSGRT----QAGSSAAHLHTGG 265 Query: 265 KGGAEDKI-NAMKEAGICIAPSPARIGRSLVEL 296 G + A++ +G+ + + ++ L Sbjct: 266 DIGLDAVYDAAIRRSGMLRVNNTHELFAAVETL 298 >gi|330821955|ref|YP_004350817.1| Acetyltransferase, GNAT family protein [Burkholderia gladioli BSR3] gi|327373950|gb|AEA65305.1| Acetyltransferase, GNAT family protein [Burkholderia gladioli BSR3] Length = 788 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 101/282 (35%), Gaps = 34/282 (12%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G G + + ++PK VF V++ E + +++ Sbjct: 25 GSIGAIVWGRVLDGGFAGPAWPVNPK------YDELNGQRVFARVSQLPEAPS--LAIVC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS---SRLIGPNCPGILT 134 PP+ + + + + E + V+ LE + R++GP G++T Sbjct: 77 TPPATWPGIVKQLGARGARGAILVGEARTAAERASVERALEAARPHLLRVVGPGSLGVIT 136 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 P P G V +S+S LT A+ GLG S AV +G + + Sbjct: 137 PHLNAHFGAPAYRVNAGGVAWVSQSNALTNAALGWAHARGLGFSHAVALGDEA--DVDAG 194 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM 254 DVL+ +D T +I++ + S A +F+ R KP++ G+ A PG + Sbjct: 195 DVLDYLASDPGTRAILLELDSVKS----ARKFMSAARAAARNKPVLALRTGR-ADPGDAL 249 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A A + AG+ + + + L Sbjct: 250 YTA----------------AFQRAGMVRVEALDDLLDEVETL 275 >gi|84501817|ref|ZP_00999975.1| putative pimeloyl-CoA synthetase [Oceanicola batsensis HTCC2597] gi|84389812|gb|EAQ02446.1| putative pimeloyl-CoA synthetase [Oceanicola batsensis HTCC2597] Length = 715 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 98/276 (35%), Gaps = 25/276 (9%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 G ++P + ++A E + ++ VP + + + Sbjct: 52 HNSFPGKVYPVNPGRE---TIQGLECHPSLAAIAE--PVDLVILSVPADDVPNQLRMGCD 106 Query: 93 AEIPLIVCITEGIPVLDMVRVKARLEKSSSR------LIGPNCPGILTPDSCKIG----I 142 + + G + V + E S +IGPNC GI+ + + + Sbjct: 107 CGVGGFIVFASGFSEIGPEGVARQAEISKIVQDAGIPMIGPNCLGIMNGNHKMLASSTVV 166 Query: 143 MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA 202 M G G+ G +S+SG L + + + GLG S+ + G + + L+ + Sbjct: 167 MGGRKLPGGNYGFISQSGALGTYWLDMSMKAGLGVSSWISTGNEA--DVDLAACLDYLVE 224 Query: 203 DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 D+ TE I + E A R+KP++ +G R A A + Sbjct: 225 DDETEVIGLYIEGVRDGAAFRAAA---RKAFERRKPVLVLKSG----SSRQGATAAASHT 277 Query: 263 GGKGGAEDKINA-MKEAGICIAPSPARIGRSLVELL 297 G G ++ +A ++ IC + S + LL Sbjct: 278 GALAGEDEAYDAVFRQYNICRSDSLTDMANKAEILL 313 >gi|182435476|ref|YP_001823195.1| putative acyl-CoA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776113|ref|ZP_08235378.1| GCN5-related N-acetyltransferase [Streptomyces cf. griseus XylebKG-1] gi|178463992|dbj|BAG18512.1| putative acyl-CoA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656446|gb|EGE41292.1| GCN5-related N-acetyltransferase [Streptomyces cf. griseus XylebKG-1] Length = 972 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 85/243 (34%), Gaps = 20/243 (8%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----- 109 VP ++ E E+ + +VI VP +A+ + E + +V ++ G Sbjct: 263 GVPAHRSLGEIDEQ--VDLAVIAVPAHRVPEAVADCGEHGVQGLVVLSAGYAERGAEGRE 320 Query: 110 -MVRVKARLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + + R+IGPN GI+ + +G +G+ ++SG + Sbjct: 321 LQRELVRQARSYGMRIIGPNAFGIINTAESVRLNASLAPESPARGRIGLFTQSGAIGIAL 380 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + G G S+ + G D L+ D T+ ++ E G+ + Sbjct: 381 LSGLHRRGAGLSSFISAGNRA--DVSGNDFLQYSFEDPDTDVALLYLESLGNPRKFTRLA 438 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 + A + +G T P GHA V M++AG+ + Sbjct: 439 RRTAAVKPVVVVKGARHSGSTPP-----GHAVPVSRIPDATVSAL---MRQAGVIRVDTV 490 Query: 287 ARI 289 + Sbjct: 491 TEM 493 >gi|76817819|ref|YP_336394.1| acetyltransferase [Burkholderia pseudomallei 1710b] gi|76582292|gb|ABA51766.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 1710b] Length = 1024 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 111/296 (37%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 250 TAVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKVYPYVDQL 303 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + ++I PP+ + + + + + E G + R A + Sbjct: 304 PSAPS--VALICTPPATWPGIVRKLGGLGVRAAIIVGETRSGADRAALERALAAAKPYLL 361 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 362 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 421 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 422 LGGEA--DVDAADVLDYLASDAETRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 475 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G +G ++ A + AG+ + + + E LG Sbjct: 476 RAGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEI-EALG 513 >gi|89076816|ref|ZP_01163064.1| putative acetyltransferase [Photobacterium sp. SKA34] gi|89047550|gb|EAR53174.1| putative acetyltransferase [Photobacterium sp. SKA34] Length = 413 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 43/295 (14%), Positives = 104/295 (35%), Gaps = 42/295 (14%) Query: 34 TQVVGGIHPKKGS----------TYWTGGNVNVPVFTTVAEAKERTA-------ANASVI 76 T + +P + + P + VA + +++ Sbjct: 14 TVIGASDNPSRAGNVVIRNLLSDQFRGPIMPVTPKYDAVAGILAYPDIASLPRVPDLAIV 73 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV--------------RVKARLEKSSS 122 D + + + + + + G+ + ++ A+ ++ Sbjct: 74 CTRAELNIDIVEQLGKKGVKAAIILAAGMNNQQLNPAPFTPNHQPSLEDQMLAKAKEYGM 133 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPN G++ P KG++ +S+S + + + +G ST + Sbjct: 134 RLIGPNSMGLILPWLNLNASFSPISANKGNIAFISQSAAVCTTILDWAKNKSIGFSTFLS 193 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G F ++L+ D TE+I++ + ++A +F+ R + I+ Sbjct: 194 LG--DACDINFAELLDTLCQDSKTEAILLYIDSV----KDARRFMSAARAAARNRRILVL 247 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVEL 296 +G+T + A + +GG G + A++ +G+ + + ++ L Sbjct: 248 KSGRT----QAGSSAAHIHTGGDIGLDAVYDAAIRRSGMLRVNNTHELFAAVETL 298 >gi|161528817|ref|YP_001582643.1| CoA-binding domain-containing protein [Nitrosopumilus maritimus SCM1] gi|160340118|gb|ABX13205.1| CoA-binding domain protein [Nitrosopumilus maritimus SCM1] Length = 705 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 67/312 (21%), Positives = 114/312 (36%), Gaps = 37/312 (11%) Query: 1 MSILVDKNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVP 57 M + LV G + GK G + + Y V I+P K + Sbjct: 249 METFFTPKSVALV-GASASPGKIGNSILDSLVNYDFKGKVYPINP-KADKIFGQK----- 301 Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + +VA+ + + + S + + + + +V ++ G L R Sbjct: 302 CYPSVADIPGKVDLVVVSVDL--SMTPPVLEDCAKKGVHSVVIVSGGGKELGGERAAYEA 359 Query: 118 ------EKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAV 167 +K R+IGPNC G+ D G + G V S+SGT+ + Sbjct: 360 EVARLSKKHKIRIIGPNCIGMFNAANRLDCAFQGQERMVRSKLGPVAFFSQSGTMGISML 419 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 S + G S + G + D++ D T+ I + E G + +F+ Sbjct: 420 E--SADTFGLSKMISFGNR--SDVDEADMIWYAANDPQTKVIGLYVEGFG----DGRKFI 471 Query: 228 KDEAK--RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAP 284 + + +KKPIV + +G+TA + A +G GG+ I A K+AGI Sbjct: 472 NVAKRVMKEKKKPIVIWKSGRTAAGAKQ----AASHTGSLGGSNAIIMGAFKQAGIISVD 527 Query: 285 SPARIGRSLVEL 296 S + L L Sbjct: 528 SYQELAGVLKAL 539 >gi|119715247|ref|YP_922212.1| GCN5-related N-acetyltransferase [Nocardioides sp. JS614] gi|119535908|gb|ABL80525.1| GCN5-related N-acetyltransferase [Nocardioides sp. JS614] Length = 883 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 96/233 (41%), Gaps = 17/233 (7%) Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSS 121 T + VI VP + A+ ++ +A +P V +T G + ++ A + S Sbjct: 239 ATPVDLVVIAVPATRVLAALEDAADASVPAAVIVTSGFSEMGEEGTRLQRQILALARRRS 298 Query: 122 SRLIGPNCPGIL--TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R++GPNC G++ P+ GS+ G + + S+SG + + GLG ++ Sbjct: 299 VRVVGPNCLGLMSLDPEVRLNATFSGSVPPPGGLAVASQSGGVGIVLADTAQELGLGVAS 358 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V +G + D+L + AD + + E G A +F + + +KP+ Sbjct: 359 FVSLGNKVDVSSN--DLLAAWRADPRVTAAALYLESFG----NAPKFARFARRFAERKPL 412 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 + V G++ GR G + + A D + +AG+ + + Sbjct: 413 LAVVGGRS-SGGRRAGASHTAAAASSSIAVDAL--FAQAGVIGCDGADDMAET 462 >gi|253701467|ref|YP_003022656.1| CoA-binding protein [Geobacter sp. M21] gi|251776317|gb|ACT18898.1| CoA-binding domain protein [Geobacter sp. M21] Length = 697 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 88/253 (34%), Gaps = 22/253 (8%) Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV-- 111 + + T+ E ++ + + + +P I E + I ++ + G L Sbjct: 53 CGLKAYKTLDEIPDQ--IDLAHVIIPSQFVPQTIEECGKKGIKAVIINSAGFCELGEEGA 110 Query: 112 ----RVKARLEKSSSRLIGPNCPGILTPDSCKIG--IMPGSIFRKGSVGILSRSGTLTYE 165 R E+ R+ GPNC GI+ D + G V +++ SG + Sbjct: 111 QLQDDFLRRGEEFGVRVFGPNCQGIINSDPALKAYCNFTFTFPEPGHVSVVALSGGVGAL 170 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + + G+GQ G ++L + DE T ++V+ E + E Sbjct: 171 IMQALADLGVGQRFYASNGNA--CDISVTEILSYYGEDEGTRAVVLYTEGFPNPGE---- 224 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 FL + KKPI+ AG+T + ++G E ++ GI S Sbjct: 225 FLAVAREVAAKKPILAMKAGRTEQGAKAASSHTGSLAGVDIATEL---IFEKTGIL---S 278 Query: 286 PARIGRSLVELLG 298 G + Sbjct: 279 FIDEGEMARAAMA 291 >gi|288917602|ref|ZP_06411966.1| CoA-binding domain protein [Frankia sp. EUN1f] gi|288350995|gb|EFC85208.1| CoA-binding domain protein [Frankia sp. EUN1f] Length = 962 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 91/247 (36%), Gaps = 35/247 (14%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL- 117 + V E + + +VI +P + DA+ ++ ++ ++ G Sbjct: 284 YPDVREIPD--PVDLAVIALPAAQVADAVRACAHKDVRNLIVVSAGFAEAGADGRARLAE 341 Query: 118 -----EKSSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 +S RLIGPN G++ D G VG ++SG L + +T Sbjct: 342 VTRLARESGMRLIGPNAMGVINTDPAVRLHATFAAGSPPTGRVGAFTQSGALAGTFLAET 401 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 ++ +G ST V G D+L+ + +DE TE +++ + G+ +F + Sbjct: 402 ARRSIGLSTFVSTGDR--SDVSGNDLLQFWQSDERTEVVMLHLQSFGNP----RKFARIA 455 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 + GR+KP++ +G G AG+ + ++ Sbjct: 456 RRLGRRKPVIALKSG------------------GSSTDPALDALFTSAGVIRVDTLGQLF 497 Query: 291 RSLVELL 297 + LL Sbjct: 498 D-MAALL 503 >gi|126443597|ref|YP_001063990.1| acetyltransferase [Burkholderia pseudomallei 668] gi|226193991|ref|ZP_03789592.1| acetyltransferase, GNAT family [Burkholderia pseudomallei Pakistan 9] gi|254185707|ref|ZP_04892225.1| acetyltransferase, GNAT family [Burkholderia pseudomallei Pasteur 52237] gi|126223088|gb|ABN86593.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 668] gi|157933393|gb|EDO89063.1| acetyltransferase, GNAT family [Burkholderia pseudomallei Pasteur 52237] gi|225933936|gb|EEH29922.1| acetyltransferase, GNAT family [Burkholderia pseudomallei Pakistan 9] Length = 803 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 111/296 (37%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 29 TAVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKVYPYVDQL 82 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + ++I PP+ + + + + + E G + R A + Sbjct: 83 PSAPS--VALICTPPATWPGIVRKLGGLGVRAAIIVGETRSGADRAALERALAAAKPYLL 140 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 141 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 200 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 201 LGGEA--DVDAADVLDYLASDAETRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 254 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G +G ++ A + AG+ + + + E LG Sbjct: 255 RAGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEI-EALG 292 >gi|53723144|ref|YP_112129.1| acetyl-CoA synthetase [Burkholderia pseudomallei K96243] gi|167821283|ref|ZP_02452963.1| acetyltransferase, GNAT family protein [Burkholderia pseudomallei 91] gi|167829621|ref|ZP_02461092.1| acetyltransferase, GNAT family protein [Burkholderia pseudomallei 9] gi|167916387|ref|ZP_02503478.1| acetyltransferase, GNAT family protein [Burkholderia pseudomallei 112] gi|52213558|emb|CAH39611.1| putative acetyl-CoA synthetase [Burkholderia pseudomallei K96243] Length = 787 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 111/296 (37%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 13 TAVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKVYPYVDQL 66 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + ++I PP+ + + + + + E G + R A + Sbjct: 67 PSAPS--VALICTPPATWPGIVRKLGGLGVRAAIIVGETRSGADRAALERALAAAKPYLL 124 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 125 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 185 LGGEA--DVDAADVLDYLASDAETRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G +G ++ A + AG+ + + + E LG Sbjct: 239 RAGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEI-EALG 276 >gi|82523920|emb|CAI78642.1| Acyl-CoA synthetase (NDP forming) [uncultured delta proteobacterium] Length = 464 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 17/221 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL-------DMVRVKARLEKSSS 122 + ++I VP A+ E + V T G ++ S Sbjct: 73 EVDLAIILVPQQLTLAAVKECAAKGVKGAVLFTAGYKETGTDEGRIHEEQLVKVAHASGM 132 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 RLIGPNC G+ P S + P G VG++S SG+L Q G+ S A+ Sbjct: 133 RLIGPNCMGVYAPRSG-LSFFPQLEREAGPVGLVSHSGSLANIICRIAPQRGIRFSKAIS 191 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + D L DE T I E + + F + KKP++ + Sbjct: 192 LGNE--CDLTSADFLLYLAKDEETSVIGAYIEGIKNGQF----FFDALREASLKKPVILW 245 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 G T+ + ++ + E + K+AG Sbjct: 246 KVGLTSAGAQAAASHTGALASARKVWEGVV---KQAGAITV 283 >gi|217422763|ref|ZP_03454266.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 576] gi|217394994|gb|EEC35013.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 576] Length = 811 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 111/296 (37%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 37 TAVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKVYPYVDQL 90 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + ++I PP+ + + + + + E G + R A + Sbjct: 91 PSAPS--VALICTPPATWPGIVRKLGGLGVRAAIIVGETRSGADRAALERALAAAKPYLL 148 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 149 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 208 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 209 LGGEA--DVDAADVLDYLASDAETRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 262 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G +G ++ A + AG+ + + + E LG Sbjct: 263 RAGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEI-EALG 300 >gi|90412269|ref|ZP_01220274.1| Hypothetical protein yahF [Photobacterium profundum 3TCK] gi|90326760|gb|EAS43153.1| Hypothetical protein yahF [Photobacterium profundum 3TCK] Length = 527 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 99/238 (41%), Gaps = 14/238 (5%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 + AN ++I VP A ++++ + ++ ++ + + ++K K ++G Sbjct: 126 QHPEANLALISVPGEYAAAEAMKALNLGLN-VMMFSDNVSLDSERKIKELALKKDLMVMG 184 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+C + + + ++ R+G++G+++ SGT EA + Q G G S A+G GG Sbjct: 185 PDCGTAIING---VPLGFANVVRRGAIGVVAASGTGLQEATCRIHQLGEGVSQAMGTGGH 241 Query: 187 P----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + G + L D T+ IV++ + + E A+ + A + K +V F Sbjct: 242 DLHQEIGGISMLQGLHALADDPDTQVIVLISKPPST---EIAERILAVASQINKPVVVNF 298 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 + H ++ AE + ++ I S + + L + SL Sbjct: 299 LGATNTDVQLNNVHFADTLAH---SAEVAVAILRNENIPNLSSQSNTQKELENITQSL 353 >gi|239991278|ref|ZP_04711942.1| putative acyl-CoA synthetase [Streptomyces roseosporus NRRL 11379] Length = 975 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 84/243 (34%), Gaps = 20/243 (8%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----- 109 VP ++ E E+ + +VI VP +A+ + E + +V ++ G Sbjct: 263 GVPAHRSLGEIDEQ--VDLAVIAVPAHRVPEAVADCGEHGVQGLVVLSAGYAERGAEGRE 320 Query: 110 -MVRVKARLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + + R+IGPN GI+ + +G +G+ ++SG + Sbjct: 321 LQRELVRQARSYGMRIIGPNAFGIINTAETVRLNASLAPESPARGRIGLFTQSGAIGIAL 380 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + G G S+ + G D L+ D T+ ++ E G+ + Sbjct: 381 LSGLHRRGAGLSSFISAGNRA--DVSGNDFLQYSFEDPDTDVALLYLESLGNPRKFTRLA 438 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 + A + +G P GHA V M++AG+ + Sbjct: 439 RRTAAVKPVVVVKGARHSGTNPP-----GHAVPVSRIPDTTVSAL---MRQAGVIRVDTV 490 Query: 287 ARI 289 + Sbjct: 491 TEM 493 >gi|303248890|ref|ZP_07335138.1| GCN5-related N-acetyltransferase [Desulfovibrio fructosovorans JJ] gi|302489689|gb|EFL49624.1| GCN5-related N-acetyltransferase [Desulfovibrio fructosovorans JJ] Length = 899 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 97/287 (33%), Gaps = 26/287 (9%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 L N+ V V G + G + +G + P + G + + +V Sbjct: 9 LFRPNS-VAVIGASADPGHVGAVIMKNLLGGKFLGPVMPVNPAHDAISGVL---CYKSVD 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA-------R 116 + VI P + + + + V + G L +A Sbjct: 65 TLP--LTPDLGVIATDPDSVPEYLRDLGRRGVGAAVVLPPGWAKLPREAKRALSARMLEA 122 Query: 117 LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 S R++GP+ G++ P + S G + +S+S +L + +G+G Sbjct: 123 AAPSGIRILGPSGLGLVVPGLGLNCSLATSEAIPGRIAFISQSASLFSAVLDWAGTKGIG 182 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 S + +G ++ D+L+ D T SI++ E +A F+ R Sbjct: 183 FSHILSLGDR--VDLKYADILDYMAQDPHTRSILLYIESVT----DARSFMSASRAAARN 236 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIA 283 KP++ G+ + S G+ E A + AG+ Sbjct: 237 KPVLVIKPGR-----KLWSIYPPDPSEGRD--EVYEEAFRRAGMLRV 276 >gi|167899732|ref|ZP_02487133.1| acetyltransferase, GNAT family protein [Burkholderia pseudomallei 7894] gi|167924246|ref|ZP_02511337.1| acetyltransferase, GNAT family protein [Burkholderia pseudomallei BCC215] gi|237508617|ref|ZP_04521332.1| acetyltransferase, gnat family [Burkholderia pseudomallei MSHR346] gi|235000822|gb|EEP50246.1| acetyltransferase, gnat family [Burkholderia pseudomallei MSHR346] Length = 787 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 111/296 (37%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 13 TSVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKVYPYVDQL 66 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + +++ PP+ + + + + + E G + R A + Sbjct: 67 PSAPS--VALVCTPPATWPGIVRKLGGLGVRAAIIVGEARSGADRAALERALAAAKPYLL 124 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 125 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 185 LGGEA--DVDAADVLDYLASDAETRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G +G ++ A + AG+ + + + E LG Sbjct: 239 RAGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEI-EALG 276 >gi|119964042|ref|YP_947534.1| GNAT family acetyltransferase [Arthrobacter aurescens TC1] gi|119950901|gb|ABM09812.1| putative acetyltransferase, GNAT family [Arthrobacter aurescens TC1] Length = 877 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 106/298 (35%), Gaps = 41/298 (13%) Query: 9 TKVLVQGLTGKAGTF---HTEQAILYCQTQVVGGIHPK---KGSTYWTGGNVNVPVFTTV 62 + V V G + K GT E I V ++P+ G +P Sbjct: 187 SSVAVIGASRKWGTVGYQLLEHIIEGGFKGPVYAVNPEAFELAGMISFGKLSEIP----- 241 Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKAR 116 ++I VP + + A + +V T G + R Sbjct: 242 ------GPVQLAIIAVPYEEVHKVVDDCAAAGVKGLVVATAGFADDGERGLARQHELVRR 295 Query: 117 LEKSSSRLIGPNCPGIL--TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + R+IGP GIL P M ++ +GS+G+ S+S + S+ Sbjct: 296 ARANGMRVIGPESLGILNTHPAVSLNASMAPTMPPRGSLGLFSQSAAVGVAVYAAASRRR 355 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 LG S+ + G D ++ + D T ++ + E G+ +F + + Sbjct: 356 LGLSSFLSAGNRA--DVSGNDAMQYWEDDADTSAVGLYLESIGNP----RKFSRLARRLS 409 Query: 235 RKKPIVGF---VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 R KP++ V G + PPG + A G A D + M++AG+ + ++ Sbjct: 410 RNKPVIVAKSDVTGLSLPPGHEVRTTQA-----PGAAVDAM--MRQAGVIRVETIEQL 460 >gi|317122311|ref|YP_004102314.1| protein FdrA [Thermaerobacter marianensis DSM 12885] gi|315592291|gb|ADU51587.1| protein FdrA [Thermaerobacter marianensis DSM 12885] Length = 675 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 10/179 (5%) Query: 60 TTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 T+++A AN ++I VP A E+++ + + C ++ +P+ D +K R Sbjct: 125 RTLSQAVAALPGANLALISVPGRFARWVAEEALDLGLH-VFCFSDNVPLADEAALKTRAA 183 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 +GP+C + + G+ + R G V I++ SGT E Q + G G Sbjct: 184 SRGLLFMGPDCGTAVVAGT---GLGFANAVRPGPVSIVAASGTGLQEVACQLDRLGTGVR 240 Query: 179 TAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSA-EEEAAQFLKDEAK 232 A+G GG V G F+ + D T IV + + A + A+ L K Sbjct: 241 HAIGTGGRDLHDEVGGATFLAAIAALARDPGTRVIVALSKPPAPAVRQRVAKALAASGK 299 >gi|167851102|ref|ZP_02476610.1| acetyltransferase, GNAT family protein [Burkholderia pseudomallei B7210] gi|254265586|ref|ZP_04956451.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 1710a] gi|254216588|gb|EET05973.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 1710a] Length = 853 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 111/296 (37%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 79 TAVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKVYPYVDQL 132 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + ++I PP+ + + + + + E G + R A + Sbjct: 133 PSAPS--VALICTPPATWPGIVRKLGGLGVRAAIIVGETRSGADRAALERALAAAKPYLL 190 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 191 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 250 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 251 LGGEA--DVDAADVLDYLASDAETRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 304 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G +G ++ A + AG+ + + + E LG Sbjct: 305 RAGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEI-EALG 342 >gi|145301075|ref|YP_001143916.1| acyl-CoA synthetase [Aeromonas salmonicida subsp. salmonicida A449] gi|142853847|gb|ABO92168.1| acyl-CoA synthetase [Aeromonas salmonicida subsp. salmonicida A449] Length = 856 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 79/230 (34%), Gaps = 20/230 (8%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + ++I I + + + + +++ + RL+GPN Sbjct: 70 PDLAIICTKRERVLSLIEALGKKGAGAAIILAADFSQEEREQLQRLSSQYDIRLLGPNSM 129 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G+L P + G V +S+S ++ + Q LG S + +G Sbjct: 130 GMLLPAQGINASFSPIAAKPGQVAFVSQSAAVSTTILDWAKQHELGFSAFISLGDH--CD 187 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 +F +L+ D T +I++ + +A FL R KPI+ +G+ P Sbjct: 188 IDFGQLLDQLSRDGTTRAILLYMDKL----HDARHFLSAARAASRNKPILVLKSGRHDP- 242 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 KG A++ AG+ + ++ L SL Sbjct: 243 -------------AKGLDNVYDAAIRRAGMLRVRDTHELFAAVETLSHSL 279 >gi|325520572|gb|EGC99649.1| putative acetyl-CoA synthetase [Burkholderia sp. TJI49] Length = 312 Score = 86.6 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 57/289 (19%), Positives = 100/289 (34%), Gaps = 31/289 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + + G+ G + P G+ V V Sbjct: 15 VAVVGASSREGSIGAMVWSRVLAGAFQGPVWPVNPKHRELDGHT---VVADVDRLPA--P 69 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV---RVKARLEKSSSRLIGP 127 + +VI PP+ + + E + + + E D V R + R++GP Sbjct: 70 PSVAVICTPPATWAGIVRKLGELGTRVAIIVGEARTDADRVALDRTLKAAKPFVLRIVGP 129 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G+L+P P R G V +S+S LT + GLG S V +G + Sbjct: 130 GSLGVLSPARHAHFGAPAYTARSGGVAWVSQSNALTNAVLGWAGARGLGFSHVVALGSEA 189 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + DV++ +D T +I++ + + A +F+ R KP++ G+ Sbjct: 190 --DVDAGDVIDYLASDPGTRAILLELDSVRA----ARKFMSAARAAARNKPVLALRTGR- 242 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A PG + A A + AG+ + + + L Sbjct: 243 ADPGDALYTA----------------AFQRAGMVRVDALDDLLDEIETL 275 >gi|312195047|ref|YP_004015108.1| CoA-binding domain protein [Frankia sp. EuI1c] gi|311226383|gb|ADP79238.1| CoA-binding domain protein [Frankia sp. EuI1c] Length = 878 Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 99/265 (37%), Gaps = 31/265 (11%) Query: 36 VVGGIHPKKGSTYWT-GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE 94 G ++P + G +V F V + + +V+ VPP+ + + Sbjct: 255 FAGPVYPVNPAAAADPGAVSSVRAFARVEDI--DGPVDLAVLCVPPAETTEVVEACGRHG 312 Query: 95 IPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVG 154 + +V IT+ + A + R++GP GI P + + G + G +G Sbjct: 313 VRGLVVITDLRDEPAEATLAAAARAAGMRVVGPASLGIQNPAAGLNASLTGQMPPPGRIG 372 Query: 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE 214 S+SG L + GLG S V G D+L+ + D ATE ++ E Sbjct: 373 CYSQSGPLGTAMLTAAETRGLGMSVFVSAGDRADISGN--DMLQYWEDDPATEVALLHLE 430 Query: 215 IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 G+ +F + + GR+ P+V AG+ +E Sbjct: 431 TFGNP----RKFARLARRVGRRTPVVVVRAGR---------------------SELDSAL 465 Query: 275 MKEAGICIAPSPARIGRSLVELLGS 299 +++AG+ + G + +LL S Sbjct: 466 LRQAGVISVDRVSA-GFDVAQLLAS 489 >gi|218297026|ref|ZP_03497703.1| GCN5-related N-acetyltransferase [Thermus aquaticus Y51MC23] gi|218242581|gb|EED09118.1| GCN5-related N-acetyltransferase [Thermus aquaticus Y51MC23] Length = 742 Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 107/276 (38%), Gaps = 30/276 (10%) Query: 36 VVGGIHP-----KKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIES 90 G + P K G + P V + +VI VP G+A+ S Sbjct: 233 FQGPVFPVNEAIGKEGGTV-GPLLAYPSLERVPG-----PVDLAVIAVPKERVGEALEAS 286 Query: 91 IEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + ++ +T G + + + + S RL+GP G+ + ++ + R Sbjct: 287 GRRGVRGVIVLTTGFTPEEAKALADKARRLSMRLLGPGSLGLTHT-ASRLAAGLVPLPRG 345 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G + I S+SGTL + GLG S+ V +G + D+L+ + DEAT+ I+ Sbjct: 346 GPLAISSQSGTLGRAVIAYAEGMGLGVSSFVSLGAKADISSN--DLLQFWEEDEATQVIL 403 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + E G+ +F + + G++KPI+ + AG V + A D Sbjct: 404 LYLESFGNP----RRFSRLARRIGKRKPILAVHPSRDPLVRTLFAQAGVVRANSLEEAFD 459 Query: 271 KINAMKEAG----------ICIAPSPARIG-RSLVE 295 + A+ G I A P+ + +L E Sbjct: 460 -VAALLSLGRLPENGQVRLISNASGPSNLALEALKE 494 >gi|160897204|ref|YP_001562786.1| CoA-binding domain-containing protein [Delftia acidovorans SPH-1] gi|160362788|gb|ABX34401.1| CoA-binding domain protein [Delftia acidovorans SPH-1] Length = 700 Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 92/244 (37%), Gaps = 20/244 (8%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK 114 ++ + VA E + +V+ + A A+ E + + G Sbjct: 55 DLACYPDVASLPEVP--DVAVVLLGAERAHQAVRELAALGCAAAIVLASGYTETGEDGAH 112 Query: 115 ARLE----KSSSRLIGPNCPGILTPDSCKI----GIMPGSIFRKGSVGILSRSGTLTYEA 166 + + S RL+GPN G++ + G + F G +G++S+SG + Sbjct: 113 RQRQLIEAAGSMRLLGPNTIGLVNLTDRIVLSPSGALEMDEFPVGGIGVVSQSGGILGSL 172 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + + G+G S + + E D ++ D AT+ I + E A Sbjct: 173 LSRAAARGIGLSKLISTSNE--VDLELADFIDHLADDPATKVIALYVETVRHPARFRAAC 230 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPS 285 LK KP+V F G++ + A +G GA+ +A ++ G+ A S Sbjct: 231 LKAARAG---KPVVAFKIGRSEAGAK----AAVSHTGAMAGADRMYDALFRQVGVIRAQS 283 Query: 286 PARI 289 A + Sbjct: 284 FADL 287 >gi|297191592|ref|ZP_06908990.1| acyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486] gi|297150999|gb|EFH30921.1| acyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486] Length = 696 Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 83/243 (34%), Gaps = 20/243 (8%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------L 108 VP +V E E + +++ VP + + + E + +V ++ G Sbjct: 259 GVPAVRSVGEIGE--PVDLAIVAVPAERVPEVVADCGEHGVQGLVVLSAGYAESGRAGRE 316 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + + R+IGPN GI++ + G +G+ ++SG + Sbjct: 317 RQRELVRQARSYGMRIIGPNSFGIISTSDTVRLNASLAPEAPVPGRIGLFTQSGAIGIAL 376 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + G G S+ + G D L+ + D T+ ++M E G+ + Sbjct: 377 LSGLHRRGAGLSSFISSGNRA--DVSGNDFLQYWHEDPDTDVVLMYLESIGNPRKFTRLA 434 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 + A + +G P GHA +++AG+ + Sbjct: 435 RRTAAVKPVVVVKGARHSGSVPP-----GHAVPFTRIPDATVGAL---LRQAGVIRVDTV 486 Query: 287 ARI 289 + Sbjct: 487 TEL 489 >gi|116753867|ref|YP_842985.1| CoA-binding domain-containing protein [Methanosaeta thermophila PT] gi|116665318|gb|ABK14345.1| CoA-binding domain protein [Methanosaeta thermophila PT] Length = 689 Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 100/274 (36%), Gaps = 25/274 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + + + ++P V + ++ + E + +V+ Sbjct: 263 GKLGWNVFYNLLTHGYRGRLYPVNPN------AAEVQGVKAYPSIRDVPE--PVDVAVVL 314 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPG 131 VP + + A + IV + G L + + + + RL+GPNC G Sbjct: 315 VPAGMTPQVVQDCCAAGVKYIVVESAGFAELGDEGKRIEREILSIVRRHGCRLLGPNCSG 374 Query: 132 ILTPDSCKI-GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 I+ + + I +G+VG+++++G ++ + L IG Sbjct: 375 IINTNCGVVESIGVVDELNRGNVGLIAQAGVYAAGYLWGLRKV-LDFGIIATIGNK--LD 431 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 D+LE DE + + M E + +F+ + ++KPIV G+T Sbjct: 432 LNETDMLEAIGMDENIDVVCMYLEDV----KGGRRFIDVAREVSKRKPIVVLKTGRTEAG 487 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 + + A ++G K+AG+ A Sbjct: 488 KKAVSSHTASLAGNDQIYSAV---FKQAGLIRAR 518 >gi|293394747|ref|ZP_06639038.1| GNAT family acetyltransferase [Serratia odorifera DSM 4582] gi|291422698|gb|EFE95936.1| GNAT family acetyltransferase [Serratia odorifera DSM 4582] Length = 883 Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 100/279 (35%), Gaps = 23/279 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AG + V + P+ V + VA + +V+ Sbjct: 25 GRAGFLMMRNLLNGGFGGPVLPVTPR------YHAVCGVMAYPDVASLP--LTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + + E + ++ P ++KA ++ + RL+GPN G+L P Sbjct: 77 THASRNLELLEALGERGCKTAIVLSS--PPAQFPQLKACAQRYAMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 +KG + +S+S + + Q +G S + +G + + L Sbjct: 135 GINASFSPVPIQKGKLAFISQSAAVANTVLDWAQQREVGFSYFIALGDSLDIDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +FL R KPI+ +G++ A Sbjct: 193 DFLARDGKTSAILLYLENIN----DARRFLSASRSASRNKPILVIKSGRSQ-------QA 241 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +++ +G A++ AG+ + ++ L Sbjct: 242 QRLLNSQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|315148965|gb|EFT92981.1| putative membrane protein FdrA [Enterococcus faecalis TX4244] Length = 519 Score = 86.2 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 13/192 (6%) Query: 59 FTTVAEAK-ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A E AN VI V A ++++ + ++ ++ + V + + +K + Sbjct: 101 YKTLDSALHEEPDANLVVISVNGKFAAREAHKALDQQ-KHVMLFSDNVTVDEELALKQKA 159 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 + ++ P+C + +G+ + R G +GI+ SGT + E Q + G G Sbjct: 160 HEKELFVMSPDCGTAIING---VGLCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGI 216 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 S +G GG + G +D L+ + DE T++I+++ + E + LK A Sbjct: 217 SQLIGTGGRDLSAEIGGLMMLDGLDALMVDEQTKAILLISKPPAPEVTE--KILKKLAVS 274 Query: 234 GRKKPIVGFVAG 245 KP+V + G Sbjct: 275 --TKPVVIYFIG 284 >gi|187934838|ref|YP_001885312.1| CoA-binding domain protein [Clostridium botulinum B str. Eklund 17B] gi|187722991|gb|ACD24212.1| CoA-binding domain protein [Clostridium botulinum B str. Eklund 17B] Length = 471 Score = 86.2 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 59/286 (20%), Positives = 105/286 (36%), Gaps = 36/286 (12%) Query: 8 NTKV---LVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 +TKV ++QGL + + ++P+ N+ + V + Sbjct: 32 DTKVGYKVIQGLN------------NWGYKGKIYPVNPR------ADYVCNLKAYKRVVD 73 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR- 123 + + I VP + + +E ++ ++V T + ++ L + Sbjct: 74 IPDE--IDLVFIAVPAHIVKMILKQCVEKKVKIVVIATSAFKEIGRGELQNELTQYCRDN 131 Query: 124 ---LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPN G+ +P + KG V ++S+SG A+ + + G S Sbjct: 132 ELPLIGPNLVGMGSPYLNFNCGFIPYLPIKGPVAMISQSGANLLAALGTSQSDHFGMSFF 191 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+G +F + + DE T+ + + E S E F+ K KKPIV Sbjct: 192 VGLGNKA--DVDFCEFISYAGIDENTKCLSVYIEGLDSPE----AFIDVCKKFNHKKPIV 245 Query: 241 GFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 G + + H + G DKI +EAG A + Sbjct: 246 TIKVGGSKIGVKAAFAHTASENEGTDDAYYDKI--FEEAGAIRATT 289 >gi|330824437|ref|YP_004387740.1| CoA-binding domain-containing protein [Alicycliphilus denitrificans K601] gi|329309809|gb|AEB84224.1| CoA-binding domain protein [Alicycliphilus denitrificans K601] Length = 705 Score = 86.2 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 101/298 (33%), Gaps = 36/298 (12%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGS---------TYWTGGNVNV-PVFTTVAEAKE- 67 + G H P+K T++ G + P + V K Sbjct: 5 REGALH-RLFHPRSVAFYGASSDPRKIGGRPLDFIKSTHFDGALYPINPQYQEVQGLKAY 63 Query: 68 ------RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKA 115 + +++ VP A+ + ++ V ++ G + ++ Sbjct: 64 PTAEAIEGPVDMAIVAVPAPHVLAALEDCARKKVGGAVVLSAGFAEVGGQGLEWQRQITE 123 Query: 116 RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAVFQTS 171 ++ R++GPNC G + +G S G + ++S+SG + Sbjct: 124 LARRTGMRVVGPNCMGSINVRRGLLGTFTPSAAGFGLVPGRISLVSQSGAFGGYCLSLIR 183 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 Q G+G + V G +F D + + DE T+ IV E + ++ + L Sbjct: 184 QRGIGLNLWVTTGNQ--SDVDFADCVRFYADDEETDVIVGYVEAV-TDKQRLVEALTLAR 240 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 +RG++ ++ G + A ++G + ++ G+ A + + Sbjct: 241 ERGKRIVMM--KVGSSEAGAHAAASHTASLAGSDQVYDGL---FRQYGVYRARTIDEL 293 >gi|126456794|ref|YP_001076911.1| acetyltransferase [Burkholderia pseudomallei 1106a] gi|126230562|gb|ABN93975.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 1106a] Length = 803 Score = 86.2 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 111/296 (37%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 29 TAVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKVYPYVDQL 82 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + +++ PP+ + + + + + E G + R A + Sbjct: 83 PSAPS--VALVCTPPATWPGIVRKLGGLGVRAAIIVGETRSGADRAALERALAAAKPYLL 140 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 141 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 200 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 201 LGGEA--DVDAADVLDYLASDAETRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 254 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G +G ++ A + AG+ + + + E LG Sbjct: 255 RAGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEI-EALG 292 >gi|238918592|ref|YP_002932106.1| hypothetical protein NT01EI_0648 [Edwardsiella ictaluri 93-146] gi|238868160|gb|ACR67871.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 890 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 82/226 (36%), Gaps = 15/226 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + +++ I E + I+ P +++ + RL+GPN Sbjct: 70 PDLAILCTNAQRTPVLIAELGAKGCRAAIVISS--PASQADALRSLALRHGVRLLGPNSL 127 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G+L P G + +S+S ++ + Q +G S V +G Sbjct: 128 GLLAPWQKLNASFSPVPILPGRLAFISQSAAVSNTILDWARQREIGFSLFVALGDSLDTD 187 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 + + L+ D T +I++ E +A +FL R KPI+ +G++ Sbjct: 188 VDDL--LDYLARDAKTSAILLYLEHL----HDARRFLSAARSAARNKPILVIKSGRSPQA 241 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +G A G A D A++ AG+ + + ++ L Sbjct: 242 RHVLGEAA-----GLDIAYD--AAIQRAGLLRVQNTHELFSAVETL 280 >gi|85860036|ref|YP_462238.1| acetyl-CoA synthetase subunit beta [Syntrophus aciditrophicus SB] gi|85723127|gb|ABC78070.1| acetyl-CoA synthetase beta subunit [Syntrophus aciditrophicus SB] Length = 701 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 98/277 (35%), Gaps = 29/277 (10%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYC-QTQVVGGIHPKKGSTYWTGGNVNVPVF 59 M + + + V G T K TF AIL +T G I+P +P F Sbjct: 1 MHSFFNPQS-IAVIGATPK--TFKGGYAILKNLKTTFKGRIYPINPQY---AEIEGLPCF 54 Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV------ 113 ++ + E + ++I++ A+ + + I+ + G D Sbjct: 55 PSIKDIPEA--VDLAIIFIAAVHVPAALEQCAIKGVSGIMIESGGFAEADEKGKSLQDAI 112 Query: 114 KARLEKSSSRLIGPNCPGILT--PDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVF 168 ++ +E++ R+ GPNC G++ P G V ++ +SG L+ V Sbjct: 113 RSFVERTGIRVWGPNCMGLVDGIRGHIFSFTDPKVLPFCLHPGPVSLIVQSGMLSAGFVI 172 Query: 169 QTSQEGL-GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFL 227 G+ G S IG + DVL L D T + + E +F+ Sbjct: 173 DILSHGITGFSKVCSIGNKA--DIDESDVLSFLLEDPDTRCVGLYLESF----VNGRRFM 226 Query: 228 KDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 K KP++ G++ A ++G Sbjct: 227 DLCRKS--DKPVIVLKGGRSRKGAEAAVSHTASLAGN 261 >gi|307726673|ref|YP_003909886.1| GCN5-related N-acetyltransferase [Burkholderia sp. CCGE1003] gi|307587198|gb|ADN60595.1| GCN5-related N-acetyltransferase [Burkholderia sp. CCGE1003] Length = 812 Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 110/318 (34%), Gaps = 55/318 (17%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPK---KGSTYWTGGNVNVPVFTTVAEAKERTAANAS 74 G G + + + ++PK G G ++P A A+ Sbjct: 25 GSTGAMVWARLLEGGFEGPLWPVNPKYETLGGHAVIGDTGDLP-----------QAPTAA 73 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS---SRLIGPNCPG 131 +I PP+ I + + + E D + ++ L + R++GP G Sbjct: 74 LICTPPASWPSIIHKLGGLGTRAAIIVGEARTDDDRLALRHALAAARPHLLRIVGPGSLG 133 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++TP P + G V +S+S LT + GLG S AV +G + Sbjct: 134 VVTPALRAQLGAPSCTVKAGGVAWVSQSNALTNAVLGWAQARGLGFSHAVALGAEA--DV 191 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP-- 249 + DVL+ +D T +I++ + + A +F+ R KP++ +G+ P Sbjct: 192 DAGDVLDYLASDPGTRAILLELDSVRA----ARKFMSAARAAARNKPVLALRSGRADPAD 247 Query: 250 ------------------------------PGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 G +I+ +G A +A AG Sbjct: 248 ALYTAAFRRAGMVRVDALDDLLDEIETLGVGRVAAGATATLITSDRGLATLARDAFAAAG 307 Query: 280 ICIAPSPARIGRSLVELL 297 +AP P ++L E L Sbjct: 308 ETLAPWPEEASQALREAL 325 >gi|116670189|ref|YP_831122.1| GCN5-related N-acetyltransferase [Arthrobacter sp. FB24] gi|116610298|gb|ABK03022.1| GCN5-related N-acetyltransferase [Arthrobacter sp. FB24] Length = 901 Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 86/231 (37%), Gaps = 24/231 (10%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP------VLDMVRVKARLEKSSSR 123 ++I VP + + A + +V T G + + + + R Sbjct: 261 PVGLAIIAVPYGEVPKVVADCAAAGVKGVVVATAGYADDGERGLARQRELVRQARSNGMR 320 Query: 124 LIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +IGP GI+ P M S+ R+G +G+ S+S + +S+ LG ST + Sbjct: 321 VIGPASLGIVNTNPAVSLNASMAPSLPRRGGLGLFSQSAAIGVALYAASSRRRLGLSTFL 380 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G D+++ + D T ++ + E G+ +F + + R KP++ Sbjct: 381 SAGNRA--DVSGNDMMQFWEDDADTAAVGLYLESIGNP----RKFSRLARRLARTKPVIV 434 Query: 242 FVA---GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + G PPG + A M+++G+ + ++ Sbjct: 435 AKSDAMGLQLPPGHAVRTTQAPAGALD-------AMMRQSGVIRVETIEQL 478 >gi|84496205|ref|ZP_00995059.1| hypothetical protein JNB_01760 [Janibacter sp. HTCC2649] gi|84382973|gb|EAP98854.1| hypothetical protein JNB_01760 [Janibacter sp. HTCC2649] Length = 892 Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 93/243 (38%), Gaps = 27/243 (11%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR------ 112 + T+ + + +VI VP + E A++ ++ ++ G Sbjct: 255 YDTIGDVP--GPVDLAVIAVPADKVLKVVDECAAADVDALLIVSAGFGEGGGEGGDELQS 312 Query: 113 -VKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 + R S R++GPN G++ P + + KG +G+ ++SG L + Sbjct: 313 ELVRRARGSGMRIVGPNSFGLINTDPALSLNASLSPDMPPKGHLGLFAQSGALGIAVLAS 372 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 ++ LG S+ G D ++ ++ D+ T ++ + E G+ +F + Sbjct: 373 AARRNLGISSFGSAGNR--VDVSGNDFMQYWIDDDDTHAVGLYLESMGNP----RKFSRI 426 Query: 230 EAKRGRKKPIVGFVAGKT---APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 GR KP++ +G + APPG + K +++AG + Sbjct: 427 ARNLGRIKPVIVVQSGVSAYGAPPGHRVRRT-------KVRPAVFAAMLRQAGCIRVSNV 479 Query: 287 ARI 289 ++ Sbjct: 480 HQM 482 Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 70/224 (31%), Gaps = 25/224 (11%) Query: 95 IPLIVCITEGI------PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCK-IGIMPGSI 147 I ++ + G+ P + R K R ++ L C + + + Sbjct: 433 IKPVIVVQSGVSAYGAPPGHRVRRTKVRPAVFAAMLRQAGCIRVSNVHQMFDVAQLVVHQ 492 Query: 148 FRKGS--VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 V I+ S L + + GL + +F + L D Sbjct: 493 PLPAGRRVAIVGNSSALGALSAGAVAGRGLKVTHGPINLPSEATAEQFREALTKAFEDPD 552 Query: 206 TESIVMVGEIGGSAE-EEAAQFLKDEAKRGRKKPIVGFVA------GKTAPPGRTMGHAG 258 +S++ A EE + ++ A++ K + F+ G T G A Sbjct: 553 VDSVLTCFIPPIVAHDEEVTEAVRSAARKSDKTCVATFLGMRGVHSSTHMDEGGTTGQAI 612 Query: 259 AVISGGKGGAEDKINAMKEA-------GICIAPSPARIGRSLVE 295 + + + A A K A G+ +A P I R + E Sbjct: 613 PIYAMPEDAAYALAKATKYAEWRNKDHGVPVA--PVGINRRVAE 654 >gi|167908040|ref|ZP_02495245.1| acetyltransferase, GNAT family protein [Burkholderia pseudomallei NCTC 13177] Length = 853 Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 111/296 (37%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 79 TAVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKVYPYVDQL 132 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + +++ PP+ + + + + + E G + R A + Sbjct: 133 PSAPS--VALVCTPPATWPGIVRKLGGLGVRAAIIVGEARSGADRAALERALAAAKPYLL 190 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 191 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 250 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 251 LGGEA--DVDAADVLDYLASDAETRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 304 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G +G ++ A + AG+ + + + E LG Sbjct: 305 RAGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEI-EALG 342 >gi|149191697|ref|ZP_01869939.1| acyl-CoA synthetase [Vibrio shilonii AK1] gi|148834486|gb|EDL51481.1| acyl-CoA synthetase [Vibrio shilonii AK1] Length = 894 Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 104/286 (36%), Gaps = 39/286 (13%) Query: 36 VVGGIHPKKGSTYWTGGNVN-------VPV---FTTV-----AEAKERTA--ANASVIYV 78 + I P + + + +PV + +V A + +++ Sbjct: 15 IGASIKPHRAGSVVIKNLLLGGYQGTILPVHPRYKSVNGILCYRAVSELPLKPDVAILCT 74 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGI--PVLD----MVRVKARLEKSSSRLIGPNCPGI 132 D + + + ++ + + P D + ++S R++GPN GI Sbjct: 75 KGERNVDLFNDLAISGVKTVIVMASDMSRPFDDATTIEQKCLQIAQQSGMRILGPNSLGI 134 Query: 133 LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 L P + G + +S+S + + + + +G S + IG + Sbjct: 135 LLPWQNFNASFSPVNCKPGKLAFISQSSAVCTTILDWANDKSIGFSAFLSIGSG--LDVD 192 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 F ++L+ D TESI++ + + +A +F+ R + I+ AG+ Sbjct: 193 FDELLDYLARDSKTESILLYVD----SIRDARRFMSAARAASRNRRILVLKAGRN----- 243 Query: 253 TMGHAGAVISGGKGGAED--KINAMKEAGICIAPSPARIGRSLVEL 296 + ++ G + + D +A++ AG+ + + ++ L Sbjct: 244 ---NLTNLVKGNESNSFDIVYDSAIQRAGMLRVNNTHELFAAVETL 286 >gi|290476235|ref|YP_003469135.1| putative acyl-CoA synthetase , ATP-binding [Xenorhabdus bovienii SS-2004] gi|289175568|emb|CBJ82371.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding [Xenorhabdus bovienii SS-2004] Length = 880 Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 98/278 (35%), Gaps = 23/278 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 KA + ++ T + + P K + V + ++ + + +VI Sbjct: 26 KASSMLMRNLLMGHFTGPILPVTPNK------TAILGVLAYPSIDKLP--LTPDLAVICT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 S + + + ++ ++ P +K +K R++GPN GIL P Sbjct: 78 HHSRNLSLLEQLAQRGCKTVIILSS--PPSQFAELKQFSQKHHIRMLGPNSLGILAPWIG 135 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 KG + +S+S ++ + + +G S + +G + + L+ Sbjct: 136 LNASFSPIPILKGKLAFISQSAAISNTILDWANHRNIGFSYFIALGDSVDIDIDDL--LD 193 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E +A +FL R KPI+ + +T A Sbjct: 194 FLARDSKTSAILLHLEHIS----DARRFLSASRSASRNKPILVVKSSRT-------RKAQ 242 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++ + A++ AG+ + ++ L Sbjct: 243 ELLGEQQNFDAAYDAAIQRAGLLRVQDTHEMFSAVETL 280 >gi|238563905|ref|ZP_04610793.1| acetyltransferase, GNAT family [Burkholderia mallei GB8 horse 4] gi|238519704|gb|EEP83172.1| acetyltransferase, GNAT family [Burkholderia mallei GB8 horse 4] Length = 683 Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 98/263 (37%), Gaps = 35/263 (13%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK G V+ V + + ++I PP+ + + + Sbjct: 8 PVNPK------YGELNGHKVYPYVDQLPSAPS--VALICTPPATWPGIVRKLGGLGVRAA 59 Query: 99 VCITE---GIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGI 155 + + E G + R A + R++GP G+++P P I + G V Sbjct: 60 IIVGEARSGADRAALERALAAAKPYLLRVVGPGSLGVVSPALGAHFGAPACIVKAGGVAW 119 Query: 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEI 215 +S+S LT + GLG S AV +GG+ + DVL+ +D T +I++ + Sbjct: 120 VSQSNALTNAVLGWAHARGLGFSHAVALGGEA--DVDAADVLDYLASDAETRAILLELDT 177 Query: 216 GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 S A +F+ R KP++ AG+ G G A Sbjct: 178 VKS----ARKFMSAARAAARNKPVLALRAGR-----------------GDSGDLLYTAAF 216 Query: 276 KEAGICIAPSPARIGRSLVELLG 298 + AG+ + + + E LG Sbjct: 217 QRAGMVRVDALDDLLDEI-EALG 238 >gi|88798311|ref|ZP_01113897.1| Acyl-CoA synthetase (NDP forming) [Reinekea sp. MED297] gi|88779087|gb|EAR10276.1| Acyl-CoA synthetase (NDP forming) [Reinekea sp. MED297] Length = 877 Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 77/234 (32%), Gaps = 23/234 (9%) Query: 59 FTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP----VLDMVRV 113 + V +E T + +++ VPP + + I + +T G+ + Sbjct: 56 YPCVRYLREIETQVDLAILCVPPEVIPRVLRQMGRLNIRAALILTGGLARQLNFNPAMNT 115 Query: 114 K--ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 K + RL+GPNC GIL PD GS + S L + Sbjct: 116 KIGELARELGIRLMGPNCLGILVPDHHMNASYTHLDALPGSAAYIGHSAALGSALLDWAG 175 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 G+G S + +G DV++ AD ++I++ E +A + L Sbjct: 176 ARGIGFSHFLTLGASA--DIRISDVVDNLAADRRVKAILIHLE----QIRDANRLLTALR 229 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 R K ++ A+ +G + AG+ + Sbjct: 230 AASRSKKVLAL----------RTHSTDALPNGVTDIQKIDAEFFARAGVLQVDT 273 >gi|225405597|ref|ZP_03760786.1| hypothetical protein CLOSTASPAR_04818 [Clostridium asparagiforme DSM 15981] gi|225042861|gb|EEG53107.1| hypothetical protein CLOSTASPAR_04818 [Clostridium asparagiforme DSM 15981] Length = 517 Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 102/232 (43%), Gaps = 18/232 (7%) Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGP 127 A+ +++ +P ++ +++ + L + ++ +P+ D + +K + ++ ++GP Sbjct: 114 EPEADLAILSIPGPLVKKDAMKLLDSGVNL-LIFSDNVPIEDELELKRKADEMGLMVMGP 172 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 +C + + + R+G +G++ SGT E G G S A+G G + Sbjct: 173 DCGTAIVRGASLA---FANKVRQGKIGMVCASGTGLQEVAVLIHNLGQGISHALGTGSND 229 Query: 188 VK----GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 VK G L+ D +TE IV+V + ++ + LK+E K+ R KP++ Sbjct: 230 VKDAIGGISMKRGLKWLEQDGSTELIVVVSKP---PQKATMENLKEEFKKCR-KPVIVNF 285 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 G + P R + E + A++ AG + S A + ++E Sbjct: 286 LGSSQPVKRD-----GNVYYTDTLEETALKALELAGETVDDSVA-VPEDILE 331 >gi|269124720|ref|YP_003298090.1| CoA-binding domain-containing protein [Thermomonospora curvata DSM 43183] gi|268309678|gb|ACY96052.1| CoA-binding domain protein [Thermomonospora curvata DSM 43183] Length = 690 Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 11/195 (5%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD-----MVRVKARLEKSSSRLI 125 V+ P I E++ + + IT I + R+ R+ ++ +R++ Sbjct: 67 PELVVLTAPARTIPAVIDEALALGVKGFLGITAHIDAANGEAGLERRLAERIRRAGARIV 126 Query: 126 GPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 GPNC G+ S + F GS+ I+S+SG L E + GLG S V IG Sbjct: 127 GPNCLGLYDAGSEL--ELAWGTFVPGSIAIVSQSGQLGLELAGLAAHAGLGVSRFVSIGN 184 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 ++LE ++ E T ++V+ E G+ E AA + ++ K IV V Sbjct: 185 Q--VDVTAAELLEDLISHETTRTVVLYLENFGAGRELAAVMAR--LRQAGKHVIVLTVGA 240 Query: 246 KTAPPGRTMGHAGAV 260 A H GA+ Sbjct: 241 SDAGRAAARSHTGAM 255 >gi|225571894|ref|ZP_03780764.1| hypothetical protein CLOHYLEM_07868 [Clostridium hylemonae DSM 15053] gi|225159451|gb|EEG72070.1| hypothetical protein CLOHYLEM_07868 [Clostridium hylemonae DSM 15053] Length = 109 Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 6/114 (5%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MSIL+D++T +L+ G+TGK G H ++ L + +++ G+ P KG G VPVF Sbjct: 1 MSILIDQDTAMLIIGITGKQGRIHCKRT-LESKARLLAGVAPGKGGQSVEG----VPVFE 55 Query: 61 TVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV 113 TVA+A+ A+++ VP DA ++++ I L+ ITE +PV+D +++ Sbjct: 56 TVADARAVFPEIRAAMLLVPKQFVRDAAFQALDEGIRLLAVITEFVPVMDALQI 109 >gi|114320197|ref|YP_741880.1| GCN5-related N-acetyltransferase [Alkalilimnicola ehrlichii MLHE-1] gi|114226591|gb|ABI56390.1| GCN5-related N-acetyltransferase [Alkalilimnicola ehrlichii MLHE-1] Length = 887 Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 91/238 (38%), Gaps = 32/238 (13%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA-------RLEKSSSR 123 + +V+ VP + DAI E V + + P L +A + R Sbjct: 67 PDLAVLDVPFNRVPDAIRALGEKGTRAAVLVGKPAPNLSPEDYRAQIQAVLDAAKPFLLR 126 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GP C + P + + G +++ S + A+ EGLG S + + Sbjct: 127 LLGPGCIDLTVPRTGVNASVAPFRPGAGRAALVTESAAVATRALDWCQSEGLGLSHLIHL 186 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 GG + DVL+ +D + +I++ E ++A +F+ + R KP+V Sbjct: 187 GGA--MDVDTGDVLDYLASDVHSRAILLYLEYI----DDARKFMSAARRAARVKPVVVLK 240 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARIGRSLVELLGS 299 + G KG AED + A + AG+ + ++ E+L S Sbjct: 241 PRR----------------GSKGAAEDAVYEAAFRRAGLVRVADLDELFNAV-EILTS 281 >gi|117618048|ref|YP_854682.1| acyl-CoA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559455|gb|ABK36403.1| acyl-CoA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 858 Score = 85.5 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 89/282 (31%), Gaps = 37/282 (13%) Query: 36 VVGGIHPKKGSTYWT-------GGNVNVPV--FTTVAEAKERTA--------ANASVIYV 78 + P+K +PV +T + +++ Sbjct: 18 IGASTDPQKAGHVVIRHLLAGQFKGPILPVSPHSTAIAGVLAYGDIDSLPLAPDLAIVCT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 I + + + + +++ ++ RL+GPN G+L P Sbjct: 78 RRERVLTLIEALGKRGAGAAIILAADFTAPEREQLQQLSQQYGIRLLGPNSMGMLLPGQG 137 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 + G V LS+S ++ + Q LG S + +G F +L+ Sbjct: 138 INASFSPIAAKPGQVAFLSQSAAVSTTILDWAKQHELGFSAFISLGDH--CDINFGQLLD 195 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ + ++A FL R KPI+ +G+ P Sbjct: 196 QLSRDSVTRAILLYMDKL----QDARHFLSAARAASRNKPILVLKSGRHEP--------- 242 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 G D A++ AG+ + ++ L SL Sbjct: 243 ---DNGLDNVYD--AAIRRAGMLRVRDTHELFAAVETLSHSL 279 >gi|262202170|ref|YP_003273378.1| CoA-binding domain-containing protein [Gordonia bronchialis DSM 43247] gi|262085517|gb|ACY21485.1| CoA-binding domain protein [Gordonia bronchialis DSM 43247] Length = 950 Score = 85.5 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 98/245 (40%), Gaps = 24/245 (9%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV--- 111 + + TV + + + +V+ VP D + + + + +V ++ G Sbjct: 305 GIRAYETVRDIPD--PVDLAVVAVPAERVPDVLDDCLVKAVRTLVVVSSGFADSGAQGLA 362 Query: 112 ---RVKARLEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 R+ ++ + RL+GPN G+ D + I G VG +SG L Sbjct: 363 SEHRLVEQVREHGMRLVGPNALGVANNDPTVALNATLAPRIPAVGRVGFFCQSGALGIAI 422 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + ++ +G ST V G D+L+ + D AT+ +++ E G+ +F Sbjct: 423 LDTAARRQIGLSTFVSAGNRA--DVSGNDLLQYWDTDTATDVVLLYLESFGNP----RKF 476 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN--AMKEAGICIAP 284 + + R KPIV +GK A +GA G +D+I +++AG+ Sbjct: 477 SRIARRVSRSKPIVAVKSGKGALTPVRAARSGA------AGLDDQIARMVLEQAGVIQVD 530 Query: 285 SPARI 289 + + Sbjct: 531 TIPEL 535 >gi|148264936|ref|YP_001231642.1| CoA-binding domain-containing protein [Geobacter uraniireducens Rf4] gi|146398436|gb|ABQ27069.1| CoA-binding domain protein [Geobacter uraniireducens Rf4] Length = 451 Score = 85.5 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 92/260 (35%), Gaps = 28/260 (10%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAE-IPL 97 ++P VPV+ ++ + E + SVI P + + + A Sbjct: 42 PVNPN------YTEIDEVPVYASIRDLPE--TVDLSVILRPAPEVPELL--AAHAGKARC 91 Query: 98 IVCITEGIPVLDM----VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG----SIFR 149 + ++ G V + RL+GPNC G+ P + + Sbjct: 92 AIIVSAGFAETGCESLQQEVVRLGRELGIRLLGPNCLGVFAPYQRLDTLFLPRERLKRPK 151 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 KG+V ++S+SG L + + G G S V G + D+ + D T + Sbjct: 152 KGNVAVVSQSGALLLCLLETLAVSGRGVSLGVNYGNAA--DIDGADIYDYLAEDLETGVV 209 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 + E + +F+ K ++KP++ AGK R ++G E Sbjct: 210 ISYLESMA----DGRRFVAAAEKLAQRKPLLILKAGKGESGQRAAYSHTGRLAGK---YE 262 Query: 270 DKINAMKEAGICIAPSPARI 289 + M+++GI + Sbjct: 263 VFSSIMRQSGIREVRDLDEL 282 >gi|222053277|ref|YP_002535639.1| CoA-binding domain protein [Geobacter sp. FRC-32] gi|221562566|gb|ACM18538.1| CoA-binding domain protein [Geobacter sp. FRC-32] Length = 695 Score = 85.5 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 88/253 (34%), Gaps = 22/253 (8%) Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD---- 109 + + T+ E + + + +P I + I ++ + G L Sbjct: 51 CGIKAYKTLEEIP--GEVDLAHVIIPSKFVPQTIEDCGRKGIKAVIINSAGFSELGEEGA 108 Query: 110 --MVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 R ++ R+ GPNC GI+ P+ + G V +++ SG + Sbjct: 109 RLQEDFLRRGKEYGVRVFGPNCQGIINSDPELKAYCNFTFTYPEPGYVSVVALSGGVGAL 168 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + + G+GQ G +++ + ADE T+++++ E + Sbjct: 169 IMQALADLGVGQRLYASNGNA--CDISIPEIVRYYGADEGTKAVILYTEGFS----DPKA 222 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 FL+ + KKPI+ AG+T + ++G E ++ GI S Sbjct: 223 FLEAAHQVTAKKPILAMKAGRTEQGAKAASSHTGSLAGVDIATEL---IFEKTGIL---S 276 Query: 286 PARIGRSLVELLG 298 G + Sbjct: 277 FTDEGEMARAAMA 289 >gi|284009264|emb|CBA76383.1| acyl-CoA synthetase/acetyltransferase [Arsenophonus nasoniae] Length = 877 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 104/278 (37%), Gaps = 23/278 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +AG+ + + T + + P K + + + T+ + + + +VI Sbjct: 26 RAGSVIIKNLLSSGFTGPILPVTPNKN------AVMGILSYPTIDKLP--FSPDLAVICT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 + + + + ++ P V++KA ++ + RL+GPN GIL P Sbjct: 78 NSERNLTCLKQLGKMGCKAAIILSS--PPSQFVKLKALTQRYNIRLLGPNSLGILAPWQQ 135 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 KG + +S+S ++ + Q +G S + +G + + L+ Sbjct: 136 LNASFSPIPILKGKLAFISQSAAVSNIILDWAQQRKIGFSYFIALGNSLDIDIDDL--LD 193 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E ++A +FL R KPI+ +G+T A Sbjct: 194 FLARDNKTSAILLYIEHI----QQARRFLSAARSASRNKPILVVKSGRTQ-------QAQ 242 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 ++ + A++ AG+ + ++ L Sbjct: 243 YLLGEVQSFDAAYDAAIQRAGLLRVQDTHEMFSAVETL 280 >gi|312173352|emb|CBX81607.1| Uncharacterized protein yfiQ [Erwinia amylovora ATCC BAA-2158] Length = 887 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 95/278 (34%), Gaps = 32/278 (11%) Query: 36 VVGGIHPKKGSTYW-------TGGNVNVPV---FTTVAEAKERTA-------ANASVIYV 78 + I P++ +PV + V + +++ Sbjct: 18 IGASIRPERAGYVMMRNLLAGGFSGPVLPVTRKYQAVCGVLTSPDIASLPLSPDLAILCT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 + E + ++ P + +KA + RL+GPN G++ P Sbjct: 78 HARRNLTLLHALGERGCKACIVLSA--PPDQLAELKACASRWQMRLLGPNSLGLIAPWQG 135 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 R+G + +S+S ++ + Q LG S + +G + + L+ Sbjct: 136 LNASFSPVPARRGKLAFISQSSAVSNTILDWAQQRQLGFSWFIALGDSLDIDADDL--LD 193 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E +A +F+ R KPI+ +G++ HA Sbjct: 194 FLARDGKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRSP-------HAQ 242 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +++ G A++ AG+ + + ++ L Sbjct: 243 RLLNTQGGMDAAWDAAIQRAGLLRVQNTHELFSAVETL 280 >gi|242312154|ref|ZP_04811171.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 1106b] gi|242135393|gb|EES21796.1| acetyltransferase, GNAT family [Burkholderia pseudomallei 1106b] Length = 737 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 108/296 (36%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 29 TAVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKVYPYVDQL 82 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + +++ PP+ + + + + + E G + R A + Sbjct: 83 PSAPS--VALVCTPPATWPGIVRKLGGLGVRAAIIVGETRSGADRAALERALAAAKPYLL 140 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 141 RVVGPGSLGVVSPALGAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 200 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 201 LGGEA--DVDAADVLDYLASDAETRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 254 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G G A + AG+ + + + E LG Sbjct: 255 RAGR-----------------GDSGDLLYTAAFQRAGMVRVDALDDLLDEI-EALG 292 >gi|282862350|ref|ZP_06271412.1| GCN5-related N-acetyltransferase [Streptomyces sp. ACTE] gi|282562689|gb|EFB68229.1| GCN5-related N-acetyltransferase [Streptomyces sp. ACTE] Length = 989 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 86/243 (35%), Gaps = 20/243 (8%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL------ 108 VP +V E ER + +V+ VP +A+ + E + +V ++ G Sbjct: 263 GVPAHRSVGEIGER--VDLAVVAVPAERVPEAVADCGEHGVRGLVVLSAGYAERGAEGRE 320 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + + R+IGPN G++ + G +G+ ++SG + Sbjct: 321 RQRELVRQARSYGMRIIGPNAFGVINTAGPVRLNASLAPESPAAGRIGLFTQSGAIGIAV 380 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + + G G ST + G D L+ + D+AT+ ++ E G+ + Sbjct: 381 LSGLHRRGAGLSTFISAGNRA--DLSGNDFLQYWFEDQATDVALLYLESFGNPRKFHRLA 438 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 + A + +G P GHA V M++AG+ + Sbjct: 439 RRTAAVKPVVVVKGARHSGSAPP-----GHAVPVSRIPDATVSAL---MRQAGVIRVDTV 490 Query: 287 ARI 289 + Sbjct: 491 TEM 493 >gi|311334532|emb|CBN08647.1| succinate-CoA ligase, alpha subunit [Microcosmus squamiger] Length = 70 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 37/69 (53%), Positives = 49/69 (71%), Gaps = 5/69 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+L++K+TKVLVQG TGK GTFH+ QA+ Y T+VVGG+ P KG T +++PVF Sbjct: 7 MSVLINKDTKVLVQGFTGKNGTFHSAQALDY-GTKVVGGVTPGKGGTTH----LDLPVFN 61 Query: 61 TVAEAKERT 69 T+ EA T Sbjct: 62 TMKEAVGET 70 >gi|284031391|ref|YP_003381322.1| CoA-binding domain-containing protein [Kribbella flavida DSM 17836] gi|283810684|gb|ADB32523.1| CoA-binding domain protein [Kribbella flavida DSM 17836] Length = 941 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 109/296 (36%), Gaps = 22/296 (7%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + + GT G + T VP + T+ + ++ Sbjct: 252 VAVIGASRREGTIGNALLRNLRDGGFPGRLSAVNADTS-AAEVDGVPAYPTIRDVQD--T 308 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRL 124 + +V+ VP D +++ + +V ++ G R+ R+ Sbjct: 309 VDLAVVAVPAEAVVDVVLDCAAKGVRGLVVVSSGFAEIGPEGRRRQRRLVGLARSYGMRV 368 Query: 125 IGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 IGPN G++ P + + +G V +SG L + + GLG S+ V Sbjct: 369 IGPNALGVINTAPGVQLNATLSPLMPSRGRVAFFCQSGALGVSILADIAGRGLGLSSFVS 428 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 G D+++ + +DEATE +++ E G+ +F + + +KP+V Sbjct: 429 AGNRA--DVSGNDLMQYWYSDEATEVVLLYLESLGNP----RKFSRVARRLAGRKPVVAL 482 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +G+ A G +G + +++G+ + + + +LL Sbjct: 483 KSGR-ATQGVPLGQMVRRSQLPPATVDSL---FRQSGLIGVDTTGELFD-VAQLLA 533 >gi|292489191|ref|YP_003532078.1| hypothetical protein EAMY_2723 [Erwinia amylovora CFBP1430] gi|292900309|ref|YP_003539678.1| acyl-CoA synthetase [Erwinia amylovora ATCC 49946] gi|291200157|emb|CBJ47283.1| putative acyl-CoA synthetase [Erwinia amylovora ATCC 49946] gi|291554625|emb|CBA22296.1| Uncharacterized protein yfiQ [Erwinia amylovora CFBP1430] Length = 887 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 95/278 (34%), Gaps = 32/278 (11%) Query: 36 VVGGIHPKKGSTYW-------TGGNVNVPV---FTTVAEAKERTA-------ANASVIYV 78 + I P++ +PV + V + +++ Sbjct: 18 IGASIRPERAGYVMMRNLLAGGFSGPVLPVTRKYQAVCGVLTSPDIASLPLSPDLAILCT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 + E + ++ P + +KA + RL+GPN G++ P Sbjct: 78 HARRNLTLLHALGERGCKACIVLSA--PPDQLAELKACASRWQMRLLGPNSLGLIAPWQG 135 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 R+G + +S+S ++ + Q LG S + +G + + L+ Sbjct: 136 LNASFSPVPARRGKLAFISQSSAVSNTILDWAQQRQLGFSWFIALGDSLDIDADDL--LD 193 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E +A +F+ R KPI+ +G++ HA Sbjct: 194 FLARDGKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRSP-------HAQ 242 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +++ G A++ AG+ + + ++ L Sbjct: 243 RLLNTQGGMDAAWDAAIQRAGLLRVQNTHELFSAVETL 280 >gi|213416872|ref|ZP_03350016.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 181 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 70/184 (38%), Gaps = 13/184 (7%) Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 P + A RL+GPN G+L P ++G + +S+S ++ Sbjct: 4 PTSQHEELLASARHYKMRLLGPNSLGLLAPWQGLNASFSPVPIKQGKLAFISQSAAVSNT 63 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + Q +G S + +G + ++L+ D T +I++ E +A + Sbjct: 64 ILDWAQQREMGFSYFIALGDSLDIDVD--ELLDYLARDSKTSAILLYLEQLS----DARR 117 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 F+ R KPI+ +G++ P + + + A + A++ AG+ Sbjct: 118 FVSAARSASRNKPILVIKSGRS-PAAQRLLNTSAGMDPAWD------AAIQRAGLLRVQD 170 Query: 286 PARI 289 + Sbjct: 171 THEL 174 >gi|251777961|ref|ZP_04820881.1| CoA-binding domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082276|gb|EES48166.1| CoA-binding domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 471 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 59/286 (20%), Positives = 105/286 (36%), Gaps = 36/286 (12%) Query: 8 NTKV---LVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 +TKV ++QGL + + ++P+ N+ + V + Sbjct: 32 DTKVGYKVIQGLN------------NWGYKGKIYPVNPR------ADYVCNLKAYKRVID 73 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR- 123 + + I VP + + +E ++ ++V T + ++ L + Sbjct: 74 IPDE--IDLVFIAVPAHIVKMILKQCVEKKVKIVVIATSAFKEIGRGELQNELTQYCRDN 131 Query: 124 ---LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPN G+ +P + KG V ++S+SG A+ + + G S Sbjct: 132 ELPLIGPNLVGMGSPYLNFNCGFIPYLPIKGPVAMISQSGANLLAALGTSQSDHFGMSFF 191 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+G +F + + DE T+ + + E S E F+ K KKPIV Sbjct: 192 VGLGNKA--DVDFCEFISYAGIDENTKCLSVYIEGLDSPE----AFIDVCKKFNHKKPIV 245 Query: 241 GFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 G + + H + G DKI +EAG A + Sbjct: 246 TIKVGGSKIGVKAAFAHTASENEGTDDEYYDKI--FEEAGAIRATT 289 >gi|33598707|ref|NP_886350.1| acetyl-CoA synthetase [Bordetella parapertussis 12822] gi|33574837|emb|CAE39499.1| acetyl-CoA synthetase [Bordetella parapertussis] Length = 729 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 85/233 (36%), Gaps = 22/233 (9%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSS 122 T + +++ VP + + + A + T G + VK AR S Sbjct: 78 TRPDLAIVAVPAAHVLATFDDVVAAGARAAIVYTSGFAEIGAEGVKVQAELTARARASGV 137 Query: 123 RLIGPNCPGILTPDSCKIGIMPGS----IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R++GPNC G++ S I G+ R GS+G+ S+SG L + + G+ S Sbjct: 138 RVLGPNCLGVINTRSKLIATFSGAVGHAPPRPGSIGLASQSGALGAHCLVLAERRGIAFS 197 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE--EAAQFLKDEAKRGRK 236 G + + +++ D T IV E A EA + + K+ Sbjct: 198 VWATSGNE--SDIDVAELIAYMATDPGTHVIVACIEGVRDAGRLIEALELARTHGKQIVM 255 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + G A H +++ G + ++E G+ A S + Sbjct: 256 MKVGSSPIGAAA----AASHTASMV----GSDQVFDAVLREFGVYRAHSIEDM 300 >gi|33603781|ref|NP_891341.1| acetyl-CoA synthetase [Bordetella bronchiseptica RB50] gi|33577906|emb|CAE35171.1| acetyl-CoA synthetase [Bordetella bronchiseptica RB50] Length = 729 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 85/233 (36%), Gaps = 22/233 (9%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSS 122 T + +++ VP + + + A + T G + VK AR S Sbjct: 78 TRPDLAIVAVPAAHVLATFDDVVAAGARAAIVYTSGFAEIGAEGVKVQAELTARARASGV 137 Query: 123 RLIGPNCPGILTPDSCKIGIMPGS----IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R++GPNC G++ S I G+ R GS+G+ S+SG L + + G+ S Sbjct: 138 RVLGPNCLGVINTRSKLIATFSGAVGHAPPRPGSIGLASQSGALGAHCLVLAERRGIAFS 197 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE--EAAQFLKDEAKRGRK 236 G + + +++ D T IV E A EA + + K+ Sbjct: 198 VWATSGNE--SDIDVAELIAYMATDPGTHVIVACIEGVRDAGRLIEALELARTHGKQIVM 255 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + G A H +++ G + ++E G+ A S + Sbjct: 256 MKVGSSPIGAAA----AASHTASMV----GSDQVFDAVLREFGVYRAHSIEDM 300 >gi|256831202|ref|YP_003159930.1| CoA-binding domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256580378|gb|ACU91514.1| CoA-binding domain protein [Desulfomicrobium baculatum DSM 4028] Length = 710 Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 90/270 (33%), Gaps = 26/270 (9%) Query: 41 HPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVC 100 +P T G P ++ E E +V V + A + Sbjct: 269 YPINPRTEALQGMRCYPNLESLPEVPE-----VAVFVVNSETVVREFEKFCRAGGKGAII 323 Query: 101 ITEGIPVLDMVRVKARLE----KSSSRLIGPNCPGILTPDSCKIGIMPGSIFR------K 150 I++G ++ RL + IGPNC GI+ S + M R Sbjct: 324 ISDGFAESGRRELEDRLRNLSLQYGVSYIGPNCLGIIDNFSG-VNTMFIPPHRTGIIREP 382 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G +GI+S+SG + E + + +G V G G ++L D E I Sbjct: 383 GGIGIISQSGGIGMELMEMLEADRVGMGKWVSCGNSSSVGV--AEILAHMGQDPRIEVIA 440 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + E E + ++ + +KP++ G TM H ++ G E Sbjct: 441 IYLEGLS----EGLKLMEIGRQVAAQKPVLIIKGGSGGGKEATMSHTASLA----GSHEA 492 Query: 271 KINAMKEAGICIAPSPARIGRSLVELLGSL 300 +AG + + +V +L L Sbjct: 493 FRACCSQAGFYLIEDLTEDPKIMVNVLSIL 522 >gi|188588366|ref|YP_001920444.1| CoA-binding domain protein [Clostridium botulinum E3 str. Alaska E43] gi|188498647|gb|ACD51783.1| CoA-binding domain protein [Clostridium botulinum E3 str. Alaska E43] Length = 471 Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 57/285 (20%), Positives = 103/285 (36%), Gaps = 34/285 (11%) Query: 8 NTKV---LVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 +TKV ++QGL + + ++P+ N+ + V + Sbjct: 32 DTKVGYKVIQGLN------------NWGYKGKIYPVNPR------ADYVCNLKAYKRVID 73 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSR- 123 + + I VP + + +E ++ ++V T + ++ L + Sbjct: 74 IPDE--IDLVFIAVPAHIVKMILKQCVEKKVKIVVIATSAFKEIGRGELQNELTQYCRDN 131 Query: 124 ---LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 LIGPN G+ +P + KG V ++S+SG A+ + + G S Sbjct: 132 ELPLIGPNLVGMGSPYLNFNCGFIPYLPIKGPVAMISQSGANLLAALGTSQSDHFGMSFF 191 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 VG+G +F + + DE T+ + + E S E F+ K KKPIV Sbjct: 192 VGLGNKA--DVDFCEFISYAGIDENTKCLSVYIEGLDSPE----AFIDVCKKFNHKKPIV 245 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 G + + A + G A +EAG A + Sbjct: 246 TIKVGGSKIGVKAAFAHTASENEGTDDAY-YDEIFEEAGAIRATT 289 >gi|329940032|ref|ZP_08289314.1| acyl-CoA synthetase [Streptomyces griseoaurantiacus M045] gi|329300858|gb|EGG44754.1| acyl-CoA synthetase [Streptomyces griseoaurantiacus M045] Length = 942 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 89/249 (35%), Gaps = 27/249 (10%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------L 108 VP +V E + +V+ V D + E + ++ ++ G Sbjct: 243 GVPAHRSVREI--DGPVDLAVVAVSAERVPDVVAACGEHGVQGLIVLSAGYAESGPEGRE 300 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + + R+IGPN G++ P+ + + R G +G+ ++SG + Sbjct: 301 RQRALVRQARTYGMRIIGPNAFGVVNTSPEVRLNASLAPEMPRPGRIGMFAQSGAIGIAL 360 Query: 167 VFQTSQE------GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 + + + G ST V G DVL+ + D T+ +M E G+ Sbjct: 361 LSRLHRRGGGVTGVTGVSTFVSAGNRA--DVSGNDVLQYWYDDPDTDVALMYLETIGNP- 417 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 +F + + KP+V + G GHA + G + +++AG+ Sbjct: 418 ---RKFTRLARRTAAVKPLVVVQGARH--GGTPTGHA---VRGTRLPHATVSALLRQAGV 469 Query: 281 CIAPSPARI 289 + + Sbjct: 470 IRVDTITEL 478 >gi|319763958|ref|YP_004127895.1| CoA-binding domain protein [Alicycliphilus denitrificans BC] gi|330823778|ref|YP_004387081.1| CoA-binding domain-containing protein [Alicycliphilus denitrificans K601] gi|317118519|gb|ADV01008.1| CoA-binding domain protein [Alicycliphilus denitrificans BC] gi|329309150|gb|AEB83565.1| CoA-binding domain protein [Alicycliphilus denitrificans K601] Length = 717 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 97/284 (34%), Gaps = 26/284 (9%) Query: 13 VQGLTGKAGTFHT-EQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAA 71 V G++ G F + A + + G ++ G P + ++A E Sbjct: 26 VVGVSTNPGAFGSITYANIAGPGRFTGPVYMVNAKYKHIGDQ---PCYPSIAALPE--TP 80 Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV-------LDMVRVKARLEKSSSRL 124 + I VP + E + + +V + G R+ + RL Sbjct: 81 DCVFIAVPRDAVEAVVAECAQRGVGGVVLFSSGFAETGLPERVAQQQRLLEIARAADMRL 140 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 +GPNC G + +G + ++ + ++S+SG + A+ Q + GL S Sbjct: 141 LGPNCVGFMNYGLGLVGTFGTASYKGAPGPRATALVSQSGAVG-AALAQAQEHGLALSHM 199 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 + G + D + D A ++I V E A R KP+V Sbjct: 200 LTCGNA--SDIDVADQVAYLANDPACQAIACVFEGMSEPSRFLAA---AALCREAGKPLV 254 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 G +A + ++G + A ++AG+ + Sbjct: 255 VHKLGTSARGAQAAVSHTGSVAGSQAAYR---AAFEQAGVIMVD 295 >gi|241764710|ref|ZP_04762721.1| CoA-binding domain protein [Acidovorax delafieldii 2AN] gi|241365828|gb|EER60483.1| CoA-binding domain protein [Acidovorax delafieldii 2AN] Length = 700 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 75/238 (31%), Gaps = 18/238 (7%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRL 124 + +++ V A A+ E + + V I G + AR RL Sbjct: 69 PDLALVVVGGDKAVAAVEECADLGVKSAVVIASGFGETGPEGVELQRHMVARARAKGMRL 128 Query: 125 IGPNCPGILTPDSCKIG----IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 GPN G+ + I + G +GI+S+SG ++ GLG Sbjct: 129 YGPNTQGLANFGTGAIAGFSTMFIEVPPMDGPIGIVSQSGGMSAMTYGLLRGRGLGVRHV 188 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 G + ++ D +++ E + AA R R PI+ Sbjct: 189 HATGNEA--DVSVGELALAVAHDPDVRLLLLYLESIANPAMLAAAA---AHARERDLPII 243 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG++A + ++ + ++ GI P R+ L Sbjct: 244 AIKAGRSAQGQKAASSHTGSLANEDRTVD---AFFRQHGIWRVRDPHEQARAAQAYLK 298 >gi|283853308|ref|ZP_06370557.1| FdrA family protein [Desulfovibrio sp. FW1012B] gi|283571289|gb|EFC19300.1| FdrA family protein [Desulfovibrio sp. FW1012B] Length = 502 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 13/191 (6%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC 129 AN ++I +P A ++ ++E + ++ ++ I + D +KA K L+GP+C Sbjct: 113 GANFAMISLPGQLAKLDVVTALEQGLH-VMLFSDNISLADEAELKALAAKKGLLLMGPDC 171 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP-- 187 + + + ++ R+G +G+ + SGT E + G G S A+G+GG Sbjct: 172 GTAIING---VALALANVVRRGEIGLAAASGTGIQEVTCLIDRFGGGVSHAIGVGGRDLK 228 Query: 188 --VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 V GT + + AD AT+++V++ + G E + + DEA++ + + + G Sbjct: 229 KEVGGTMMRQAIRILAADPATKTLVVLSKPGAP---EVMETVLDEARQSGLRVVTCLLGG 285 Query: 246 --KTAPPGRTM 254 AP G Sbjct: 286 DASAAPEGMVC 296 >gi|33591865|ref|NP_879509.1| acetyl-CoA synthetase [Bordetella pertussis Tohama I] gi|33571508|emb|CAE44998.1| acetyl-CoA synthetase [Bordetella pertussis Tohama I] gi|332381282|gb|AEE66129.1| acetyl-CoA synthetase [Bordetella pertussis CS] Length = 729 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 85/233 (36%), Gaps = 22/233 (9%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSS 122 T + +++ VP + + + A + T G + VK AR S Sbjct: 78 TRPDLAIVAVPAAHVLATFDDVVAAGARAAIVYTSGFAEIGAEGVKVQAELTARARASGV 137 Query: 123 RLIGPNCPGILTPDSCKIGIMPGS----IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 R++GPNC G++ S I G+ R GS+G+ S+SG L + + G+ S Sbjct: 138 RVLGPNCLGVINTRSKLIATFSGAVGHAPPRPGSIGLASQSGALGAHCLVLAERRGIAFS 197 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE--EAAQFLKDEAKRGRK 236 G + + +++ D T IV E A EA + + K+ Sbjct: 198 VWATSGNE--SDIDVAELIAYMATDPGTHVIVACIEGVRDAGRLIEALELARTHGKQIVM 255 Query: 237 KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + G A H +++ G + ++E G+ A S + Sbjct: 256 MKVGSSPIGAAA----AASHTASMV----GSDQVFDAVLREFGVYRAHSIEDM 300 >gi|297156689|gb|ADI06401.1| acyl-CoA synthetase [Streptomyces bingchenggensis BCW-1] Length = 971 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 102/295 (34%), Gaps = 30/295 (10%) Query: 11 VLVQGLTGKA----GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 V V G TG+A G + + V ++ VP ++ E Sbjct: 215 VAVIG-TGRAPGGVGRTVLRNLLDGGFSGRVHAVNRAFPQEQDRLDPEGVPAHRSIHEI- 272 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKS 120 + +++ VP + + + ++ + +V ++ G + + Sbjct: 273 -DGPVDLAIVAVPAAQVPSVVADCGDSGVQSLVVVSAGYAESGPEGRDRQRELVRQARTY 331 Query: 121 SSRLIGPNCPGILTP--DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG-- 176 R+IGPN G++ + + G +G+ ++SG + + G G Sbjct: 332 GMRIIGPNAFGVINTADGVRLNASLSPRLPAPGRLGLFTQSGAIGIALLSGLDLRGAGTA 391 Query: 177 -QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 ST + G DVL+ + D T+ +M E G+ +F + + Sbjct: 392 GVSTFISAGNRA--DVSGNDVLQYWYDDPRTDVALMYLESIGNP----RKFTRLAKRTAA 445 Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 KP+V + + T A G + ++A +++AG+ + + Sbjct: 446 VKPVVVVKGARHSGSAPTGHAVPA-----PGIPDATVSALLRQAGVIRVDTVTEL 495 >gi|313902908|ref|ZP_07836304.1| protein FdrA [Thermaerobacter subterraneus DSM 13965] gi|313466843|gb|EFR62361.1| protein FdrA [Thermaerobacter subterraneus DSM 13965] Length = 673 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 12/186 (6%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPN 128 AN ++I VP A E+++ + + C ++ +P+ D V +KA+ + +GP+ Sbjct: 155 PGANLALISVPGRFARWVAEEALDLGLH-VFCFSDNVPLDDEVALKAQAARRGLLFMGPD 213 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP- 187 C L + G+ + R G GI++ SGT E Q + G+G A+G GG Sbjct: 214 CGTALVAGT---GLGFANAVRPGPAGIVAASGTGLQEVACQLDRLGVGVRHAIGTGGRDL 270 Query: 188 ---VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 V G F + D T IV + + A ++ + KP+V Sbjct: 271 HEAVGGATFRAAVAALARDPGTRLIVALSKPPSPAVKQQVLEVLATCG----KPVVVHFL 326 Query: 245 GKTAPP 250 G+ P Sbjct: 327 GEPDQP 332 >gi|311278482|ref|YP_003940713.1| GCN5-related N-acetyltransferase [Enterobacter cloacae SCF1] gi|308747677|gb|ADO47429.1| GCN5-related N-acetyltransferase [Enterobacter cloacae SCF1] Length = 882 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 95/280 (33%), Gaps = 27/280 (9%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG--GNVNVPVFTTVAEAKERTAANASVI 76 +AG + V + P W G + P ++ + +VI Sbjct: 26 RAGYLMMRNLLGGGFNGPVLPVTP-----TWKAVLGVLAWPTIESLP-----FTPDLAVI 75 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD 136 + + E + ++ P + A + RL+GPN G+L P Sbjct: 76 CTHARRNLELLQALGEKGCKTCIILSA--PPEQNADLLACAGRYQMRLLGPNSLGLLAPW 133 Query: 137 SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 R+G + +S+S ++ + Q +G S + +G + + Sbjct: 134 QGLNASFSPVPIRRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVDDL-- 191 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGH 256 L+ D T +I++ E +A F+ R KPI+ +G++ P + + H Sbjct: 192 LDYLARDSKTSAILLYLEHLT----DARHFVSSARSASRNKPILVIKSGRS-PAAQRLLH 246 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + A++ AG+ + ++ L Sbjct: 247 VNAGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|322371021|ref|ZP_08045574.1| acetyl-CoA synthetase [Haladaptatus paucihalophilus DX253] gi|320549456|gb|EFW91117.1| acetyl-CoA synthetase [Haladaptatus paucihalophilus DX253] Length = 724 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 93/262 (35%), Gaps = 26/262 (9%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P + N P F T+ + E + V+ VP D + + E +P+ Sbjct: 56 PVNPNR------EEAWNRPCFDTIEDVPE--TVDLVVVSVPREYVVDVVRAAGERGVPIA 107 Query: 99 VCITEGIPVLDM------VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152 + +T G D + A + R++GPNC G++ + G Sbjct: 108 LVLTAGFAEADETGSELERDLAATAAEVGIRVVGPNCIGVMAARGATLTSTCSRKPGPGG 167 Query: 153 VGILSRSGTLTYEAVFQ-TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVM 211 +G++S+SG L + F+ + + L S V G + D + E+ + + Sbjct: 168 IGLVSQSGALAFTTFFERATDQDLHFSHIVSTGNE--TDLTLTDYVAYLAEQESVDVVCT 225 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDK 271 + G + E + + A R + + T+ H G++ G + Sbjct: 226 Y--VEGIDDPERFMQVAEAAVRNGTPVLTVKIGQSDLAEEATLSHTGSLT----GDDDAW 279 Query: 272 INAMKEAGICIAPSPARIGRSL 293 +AG+ P I L Sbjct: 280 ATVFDQAGVQRVP---DIPDLL 298 >gi|260365387|ref|ZP_05777929.1| acetyltransferase, GNAT family [Vibrio parahaemolyticus K5030] gi|308112834|gb|EFO50374.1| acetyltransferase, GNAT family [Vibrio parahaemolyticus K5030] Length = 876 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 101/281 (35%), Gaps = 33/281 (11%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + + + P+ K + + VA + +++ Sbjct: 24 RAGQVVMRNLLQSGFDGAIMPVTPRYKAVSGVIA-------YRDVASLP--YTPDIAILC 74 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E P + I++ LD L + R++GPN GI+ P Sbjct: 75 TNASRNEQLLKELDERGTPFAIVISDDAQTLD-------LSSLNIRVLGPNSLGIILPWH 127 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 + G + +S+S + + + + +G S+ + IG +F D+L Sbjct: 128 NFNCTFSPVAAKPGKIAFISQSAAVCTTVLDWANDKNIGFSSFISIGRGQ--DIDFADLL 185 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D TE+I++ + + ++A +F+ R + I+ AG++ Sbjct: 186 DYLSMDGNTEAILLYVD----SIQDARRFMSAARAASRNRRILVLKAGRSKEM------- 234 Query: 258 GAVISGGKGGAEDKI--NAMKEAGICIAPSPARIGRSLVEL 296 G D I +A++ G+ + + ++ L Sbjct: 235 -NTFEQQDGDTLDVIYDSAIRRTGMLRVSNTHELFAAVETL 274 >gi|73537537|ref|YP_297904.1| CoA-binding [Ralstonia eutropha JMP134] gi|72120874|gb|AAZ63060.1| CoA-binding [Ralstonia eutropha JMP134] Length = 725 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 89/267 (33%), Gaps = 23/267 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P S +P + ++++ E + ++I VP S + D + + Sbjct: 38 YAGRIYPVNAS---AAEVQGLPAYGSLSDIGE--PVDLAIIAVPASASQDVMAQLAGNGT 92 Query: 96 PLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP----G 145 V T G R+ +++ L+GPNC G + Sbjct: 93 RAAVVFTSGFAEAGGAGVQMQERLARSAQQAGITLLGPNCLGAMNLRERVFATFSPIALS 152 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 G VG++S+SG A + GLG S V G + G + DV+E D Sbjct: 153 GTPPVGEVGLVSQSGAFGAYAFALAREAGLGLSHWVTTGNEA--GLQVADVIEWLAHDPN 210 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK 265 T I+ E A KP+V G T R+ A ++G Sbjct: 211 TRVILAYIEGCRDGARLRRALAAARAAG---KPVVVTKVGTTEAGARSAQSHTASLAGED 267 Query: 266 GGAEDKINAMKEAGICIAPSPARIGRS 292 + + G+ A + R Sbjct: 268 AVYQAV---FEAYGVHRAHTLEEFFRL 291 >gi|328952871|ref|YP_004370205.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109] gi|328453195|gb|AEB09024.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109] Length = 696 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 90/247 (36%), Gaps = 27/247 (10%) Query: 50 TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 G ++ ++ ++ + T+ + + P + + + + +V + G L Sbjct: 46 GGQAFDLKIYPSLLDLP--TSPDLVAVLAPARVVPNILDDCGRLGVKRVVVESGGFSELG 103 Query: 110 MVRVK------ARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGT 161 + RL R++GPN GI+ C + R G V ++ +SG Sbjct: 104 EEGHRLEEQVQQRLRDHQIRMVGPNGLGIINLEIGLCLPFMSLPGKPRLGGVSLVCQSGG 163 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 + + +Q GLG + V +G D+L L D T+ I + E Sbjct: 164 VGGNVIAWLAQSGLGMNKFVSVGNK--LDISENDILSFLLNDPGTKLIYLYMEDLA---- 217 Query: 222 EAAQFLKDEAKRGRKKPIV---GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEA 278 + + ++ + KKPI+ + G +A R H ++ E A ++ Sbjct: 218 DGRRLMELGRQA--KKPILLHKANIGGLSADIAR--SHTASLAVDD----EVVTAACCQS 269 Query: 279 GICIAPS 285 GI S Sbjct: 270 GILRVHS 276 >gi|300121361|emb|CBK21741.2| Acetyl CoA synthetase subunit ? [Blastocystis hominis] Length = 737 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 107/303 (35%), Gaps = 38/303 (12%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTT 61 D + ++ G + K G+ + + ++PK G + P++ + Sbjct: 30 FFDAKSYAII-GASEKQGSLGYIISDNFYHKFQGKTYFVNPK------GGKLFDQPIYKS 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------VK 114 +E + VI + DA+ + +E + + G + Sbjct: 83 ASEIPD--TIEGVVISISAKFTVDALKQCLERGAKWVTIVPGGFRETGTKEGIEAEKEIV 140 Query: 115 ARLEKSSSRLIGPNCPGILTP---DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + R+IGPNC G+ P D+ IG S + G VG+ S+SG L + + S Sbjct: 141 RLANEYKCRIIGPNCMGVYDPRNVDTMFIGDRGLSKPKLGPVGLFSQSGALGTALLNELS 200 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + I + D ++ + D + + I E A +F++ Sbjct: 201 GATQEPWISRFISFGNACDVDEKDCIDYYEQDPSVKQIWAYMEGF----HNAPEFIRSVK 256 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-----MKEAGICIAPSP 286 + +KKP++ A + G++GA S + +A ++ AG Sbjct: 257 RISQKKPVMVLKANR--------GNSGAKASASHSASLAANDAVCDQLLRNAGAIRCDVW 308 Query: 287 ARI 289 A + Sbjct: 309 ADL 311 >gi|260902130|ref|ZP_05910525.1| acetyltransferase, GNAT family [Vibrio parahaemolyticus AQ4037] gi|308109943|gb|EFO47483.1| acetyltransferase, GNAT family [Vibrio parahaemolyticus AQ4037] Length = 877 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 101/281 (35%), Gaps = 33/281 (11%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + + + P+ K + + VA + +++ Sbjct: 24 RAGQVVMRNLLQSGFDGAIMPVTPRYKAVSGVIA-------YRDVASLP--YTPDIAILC 74 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E P + I++ LD L + R++GPN GI+ P Sbjct: 75 TNASRNEQLLKELDERGTPFAIVISDDAQTLD-------LSSLNIRVLGPNSLGIILPWH 127 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 + G + +S+S + + + + +G S+ + IG +F D+L Sbjct: 128 NFNCTFSPVAAKPGKIAFISQSAAVCTTVLDWANDKNIGFSSFISIGRGQ--DIDFADLL 185 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D TE+I++ + + ++A +F+ R + I+ AG++ Sbjct: 186 DYLSMDGNTEAILLYVD----SIQDARRFMSAARAASRNRRILVLKAGRSKEM------- 234 Query: 258 GAVISGGKGGAEDKI--NAMKEAGICIAPSPARIGRSLVEL 296 G D I +A++ G+ + + ++ L Sbjct: 235 -NTFEQQDGDTLDVIYDSAIRRTGMLRVSNTHELFAAVETL 274 >gi|328470677|gb|EGF41588.1| putative acetyltransferase [Vibrio parahaemolyticus 10329] Length = 877 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 101/281 (35%), Gaps = 33/281 (11%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + + + P+ K + + VA + +++ Sbjct: 24 RAGQVVMRNLLQSGFDGAIMPVTPRYKAVSGVIA-------YRDVASLP--YTPDIAILC 74 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E P + I++ LD L + R++GPN GI+ P Sbjct: 75 TNASRNEQLLKELDERGTPFAIVISDDAQTLD-------LSSLNIRVLGPNSLGIILPWH 127 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 + G + +S+S + + + + +G S+ + IG +F D+L Sbjct: 128 NFNCTFSPVAAKPGKIAFISQSAAVCTTVLDWANDKNIGFSSFISIGRGQ--DIDFADLL 185 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D TE+I++ + + ++A +F+ R + I+ AG++ Sbjct: 186 DYLSMDGNTEAILLYVD----SIQDARRFMSAARAASRNRRILVLKAGRSKEM------- 234 Query: 258 GAVISGGKGGAEDKI--NAMKEAGICIAPSPARIGRSLVEL 296 G D I +A++ G+ + + ++ L Sbjct: 235 -NTFEQQDGDTLDVIYDSAIRRTGMLRVSNTHELFAAVETL 274 >gi|28900739|ref|NP_800394.1| putative acetyltransferase [Vibrio parahaemolyticus RIMD 2210633] gi|260877675|ref|ZP_05890030.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus AN-5034] gi|260896055|ref|ZP_05904551.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus Peru-466] gi|28809185|dbj|BAC62227.1| putative acetyltransferase [Vibrio parahaemolyticus RIMD 2210633] gi|308088118|gb|EFO37813.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus Peru-466] gi|308090579|gb|EFO40274.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus AN-5034] Length = 877 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 101/281 (35%), Gaps = 33/281 (11%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + + + P+ K + + VA + +++ Sbjct: 24 RAGQVVMRNLLQSGFDGAIMPVTPRYKAVSGVIA-------YRDVASLP--YTPDIAILC 74 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E P + I++ LD L + R++GPN GI+ P Sbjct: 75 TNASRNEQLLKELDERGTPFAIVISDDAQTLD-------LSSLNIRVLGPNSLGIILPWH 127 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 + G + +S+S + + + + +G S+ + IG +F D+L Sbjct: 128 NFNCTFSPVAAKPGKIAFISQSAAVCTTVLDWANDKNIGFSSFISIGRGQ--DIDFADLL 185 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D TE+I++ + + ++A +F+ R + I+ AG++ Sbjct: 186 DYLSMDGNTEAILLYVD----SIQDARRFMSAARAASRNRRILVLKAGRSKEM------- 234 Query: 258 GAVISGGKGGAEDKI--NAMKEAGICIAPSPARIGRSLVEL 296 G D I +A++ G+ + + ++ L Sbjct: 235 -NTFEQQDGDTLDVIYDSAIRRTGMLRVSNTHELFAAVETL 274 >gi|300176890|emb|CBK25459.2| Acetyl-CoA synthetase [Blastocystis hominis] Length = 736 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 107/303 (35%), Gaps = 38/303 (12%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTT 61 D + ++ G + K G+ + + ++PK G + P++ + Sbjct: 30 FFDAKSYAII-GASEKQGSLGYIISDNFYHKFQGKTYFVNPK------GGKLFDQPIYKS 82 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR-------VK 114 +E + VI + DA+ + +E + + G + Sbjct: 83 ASEIPD--TIEGVVISISAKFTVDALKQCLERGAKWVTIVPGGFRETGTKEGIEAEKEIV 140 Query: 115 ARLEKSSSRLIGPNCPGILTP---DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + R+IGPNC G+ P D+ IG S + G VG+ S+SG L + + S Sbjct: 141 RLANEYKCRIIGPNCMGVYDPRNVDTMFIGDRGLSKPKLGPVGLFSQSGALGTALLNELS 200 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 + I + D ++ + D + + I E A +F++ Sbjct: 201 GATQEPWISRFISFGNACDVDEKDCIDYYEQDPSVKQIWAYMEGF----HNAPEFIRSVK 256 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-----MKEAGICIAPSP 286 + +KKP++ A + G++GA S + +A ++ AG Sbjct: 257 RISQKKPVMVLKANR--------GNSGAKASASHSASLAANDAVCDQLLRNAGAIRCDVW 308 Query: 287 ARI 289 A + Sbjct: 309 ADL 311 >gi|153838111|ref|ZP_01990778.1| acyl-CoA synthetase [Vibrio parahaemolyticus AQ3810] gi|149748497|gb|EDM59356.1| acyl-CoA synthetase [Vibrio parahaemolyticus AQ3810] Length = 877 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 101/281 (35%), Gaps = 33/281 (11%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + + + P+ K + + VA + +++ Sbjct: 24 RAGQVVMRNLLQSGFDGAIMPVTPRYKAVSGVIA-------YRDVASLP--YTPDIAILC 74 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 S + E E P + I++ LD L + R++GPN GI+ P Sbjct: 75 TNASRNEQLLKELDERGTPFAIVISDDAQTLD-------LSSLNIRVLGPNSLGIILPWH 127 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 + G + +S+S + + + + +G S+ + IG +F D+L Sbjct: 128 NFNCTFSPVAAKPGKIAFISQSAAVCTTVLDWANDKNIGFSSFISIGRGQ--DIDFADLL 185 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D TE+I++ + + ++A +F+ R + I+ AG++ Sbjct: 186 DYLSMDGNTEAILLYVD----SIQDARRFMSAARAASRNRRILVLKAGRSKEM------- 234 Query: 258 GAVISGGKGGAEDKI--NAMKEAGICIAPSPARIGRSLVEL 296 G D I +A++ G+ + + ++ L Sbjct: 235 -NTFEQQDGDTLDVIYDSAIRRTGMLRVSNTHELFAAVETL 274 >gi|37676443|ref|NP_936839.1| acyl-CoA synthetase [Vibrio vulnificus YJ016] gi|37200985|dbj|BAC96809.1| acyl-CoA synthetase [Vibrio vulnificus YJ016] Length = 892 Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 91/263 (34%), Gaps = 27/263 (10%) Query: 50 TGGNVNVPV---FTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLIV 99 +PV + +VA + + +++ + E ++ Sbjct: 37 GFDGTIIPVTPRYKSVAGVLAYPSVTELPLVPDIAILCTRSERNVALFKQLAEIGTEFVI 96 Query: 100 CITEGIPVLDMVR------VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSV 153 + +S+ R++GPN G++ P + G + Sbjct: 97 VLASDTDYPHQDDQSVADACLRIARESNMRVLGPNSLGLILPWQKFNASFSPVTAKPGKI 156 Query: 154 GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVG 213 +S+S + + + + +G S V IG +F ++L+ D T++I++ Sbjct: 157 AFISQSAAVCTTILDWANDKEIGFSAFVSIGNG--LDIDFDELLDYLSTDSKTDAILLYV 214 Query: 214 EIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN 273 + +A +F+ R + I+ G++ R + +GA D + Sbjct: 215 DSIT----DARRFISAARAASRNRRILVLKGGRSILGRRALNKSGA---DTLDIVYD--S 265 Query: 274 AMKEAGICIAPSPARIGRSLVEL 296 A++ +G+ + + ++ L Sbjct: 266 AIRRSGMLRVNNTHELFAAVETL 288 >gi|221632598|ref|YP_002521819.1| protein fdrA [Thermomicrobium roseum DSM 5159] gi|221157036|gb|ACM06163.1| protein fdrA [Thermomicrobium roseum DSM 5159] Length = 514 Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 12/207 (5%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 ++ + A+ I VP A E++ A+ + ++ +P+ + VR+K ++ Sbjct: 109 TALRQVSQASVVAISVPGPYAPIEAEEALRAD-RHVFLFSDNVPIEEEVRLKELAQERGL 167 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 L+GP+C +G+ + R+G +GI++ +GT + G G S +G Sbjct: 168 LLMGPDCGTAFIAG---LGLGFMNAVRRGPIGIVAAAGTGLQQLASLIDWFGSGISHGIG 224 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 GG V G + LE D AT+ IV+V + E A+ + A KP Sbjct: 225 TGGRDLDARVGGRTMLAGLEALAHDPATQVIVLVSKPPAP---EVAEKVLAFAAACG-KP 280 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGK 265 +V G+TAP + A + + Sbjct: 281 VVATFIGQTAPVTEGVHVAANLTEAAR 307 >gi|160896824|ref|YP_001562406.1| CoA-binding domain-containing protein [Delftia acidovorans SPH-1] gi|160362408|gb|ABX34021.1| CoA-binding domain protein [Delftia acidovorans SPH-1] Length = 705 Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 79/238 (33%), Gaps = 18/238 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKARLEKSSSR 123 + +++ VP S + ++ A + +V + G + R +++ R Sbjct: 75 PVDLAIVAVPQSQVAGVLEDAAAARVQSMVLFSSGYAETGSDGTAAQQALARRAQEAGIR 134 Query: 124 LIGPNCPGILTPDSCKIGIMPGSI----FRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 LIGPNC G + P + R G +G++S+SG A + GLG S Sbjct: 135 LIGPNCLGFMRPGHQVYATFSPAPGGGLVRPGRIGMVSQSGAFGAYAYSLARERGLGLSL 194 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 G + + D L D T+ I+ E A + + KP+ Sbjct: 195 WATTGNEA--DVQLADGLAWLAQDPETDVIMAYMEGCRDGPRLRAALALAQERG---KPV 249 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 V G +A A ++G E + G+ A S Sbjct: 250 VMCKVGTSALGAAAAASHTASLAGNDAVYEAV---FRRYGVLRAHSITDFFALAASAY 304 >gi|320158617|ref|YP_004190995.1| protein acetyltransferase [Vibrio vulnificus MO6-24/O] gi|319933929|gb|ADV88792.1| protein acetyltransferase [Vibrio vulnificus MO6-24/O] Length = 892 Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 91/263 (34%), Gaps = 27/263 (10%) Query: 50 TGGNVNVPV---FTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLIV 99 +PV + +VA + + +++ + E ++ Sbjct: 37 GFDGTIIPVTPRYKSVAGVLAYPSVTELPLVPDIAILCTRSERNVALFKQLAEIGTEFVI 96 Query: 100 CITEGIPVLDMVR------VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSV 153 + +S+ R++GPN G++ P + G + Sbjct: 97 VLASDTDYPHQDDQSVADACLRIARESNMRVLGPNSLGLILPWQKFNASFSPVTAKPGKI 156 Query: 154 GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVG 213 +S+S + + + + +G S V IG +F ++L+ D T++I++ Sbjct: 157 AFISQSAAVCTTILDWANDKEIGFSAFVSIGNG--LDIDFDELLDYLSTDSKTDAILLYV 214 Query: 214 EIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN 273 + +A +F+ R + I+ G++ R + +GA D + Sbjct: 215 DSIT----DARRFISAARAASRNRRILVLKGGRSILGRRALNKSGA---DTLDIVYD--S 265 Query: 274 AMKEAGICIAPSPARIGRSLVEL 296 A++ +G+ + + ++ L Sbjct: 266 AIRRSGMLRVNNTHELFAAVETL 288 >gi|317493382|ref|ZP_07951804.1| acetyltransferase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918775|gb|EFV40112.1| acetyltransferase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 891 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 99/279 (35%), Gaps = 23/279 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+ G + + + V + P+ V + + A + +++ Sbjct: 25 GRNGHLIMQNLLKGGFSGPVMPVTPR------YQAVCGVLAYPDIESLP--FAPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + I + + ++ P +K+ ++ + RL+GPN G+L P Sbjct: 77 INAKRNIEVIAALGKKGCRAAIVLSS--PNAQAQELKSCAQQHNVRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 G + +S+S ++ + Q +G S + +G + + L Sbjct: 135 KMNASFSPVPILPGKLAFISQSAAVSNTILDWAQQREIGFSLFIALGDSLDIDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +FL R KPI+ +G++ A Sbjct: 193 DFLARDSKTSAILIYLEHL----HDARRFLSAARSASRNKPILVIKSGRSP-------QA 241 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +++ +G A++ AG+ + ++ L Sbjct: 242 QQLLNSVQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|27366726|ref|NP_762253.1| protein acetyltransferase [Vibrio vulnificus CMCP6] gi|27358293|gb|AAO07243.1| Protein acetyltransferase [Vibrio vulnificus CMCP6] Length = 892 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 91/263 (34%), Gaps = 27/263 (10%) Query: 50 TGGNVNVPV---FTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLIV 99 +PV + +VA + + +++ + E ++ Sbjct: 37 GFDGTIIPVTPRYKSVAGVLAYPSVTELPLVPDIAILCTRSERNVALFKQLAEIGTEFVI 96 Query: 100 CITEGIPVLDMVR------VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSV 153 + +S+ R++GPN G++ P + G + Sbjct: 97 VLASDTDYPHQDDQSVADACLRIARESNMRVLGPNSLGLILPWQKFNASFSPVTAKPGKI 156 Query: 154 GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVG 213 +S+S + + + + +G S V IG +F ++L+ D T++I++ Sbjct: 157 AFISQSAAVCTTILDWANDKEIGFSAFVSIGNG--LDIDFDELLDYLSTDSKTDAILLYV 214 Query: 214 EIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN 273 + +A +F+ R + I+ G++ R + +GA D + Sbjct: 215 DSIT----DARRFISAARAASRNRRILVLKGGRSILGRRALNKSGA---DTLDIVYD--S 265 Query: 274 AMKEAGICIAPSPARIGRSLVEL 296 A++ +G+ + + ++ L Sbjct: 266 AIRRSGMLRVNNTHELFAAVETL 288 >gi|298244195|ref|ZP_06968001.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp [Ktedonobacter racemifer DSM 44963] gi|297551676|gb|EFH85541.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp [Ktedonobacter racemifer DSM 44963] Length = 714 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 90/242 (37%), Gaps = 24/242 (9%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVR 112 + ++ + E + + I VP + E+ A V +T G Sbjct: 65 YKSLRDLPE--PVDLAFIMVPTHSVFPIVQEAAAAGTRHFVVLTSGYSEVGAEGAHLERE 122 Query: 113 VKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 + A + L+GPN G + G+ G VG++ +SG L + Sbjct: 123 LLAFAREHDLVLLGPNGNGFINVTSRVTPYGLPISPPLAAGPVGVVLQSGALASAVLAFA 182 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 +G S V +G + + DV++ L DE+T SI + E +E K Sbjct: 183 QAHAIGLSLLVSMGNESMISVT--DVVDYLLEDESTRSIALFLESIRHPDELRRIAAKAR 240 Query: 231 AKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPA 287 A+ KPIV G++ R + H GA++ +DK+ ++ GI S Sbjct: 241 ARG---KPIVALKIGRSETSARTALSHTGAIVG------DDKVNDAIFRQLGIMRVHSLE 291 Query: 288 RI 289 + Sbjct: 292 DL 293 >gi|257068610|ref|YP_003154865.1| acyl-CoA synthetase (NDP forming) [Brachybacterium faecium DSM 4810] gi|256559428|gb|ACU85275.1| acyl-CoA synthetase (NDP forming) [Brachybacterium faecium DSM 4810] Length = 908 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 79/217 (36%), Gaps = 16/217 (7%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD-----MVRVKARLEKSSSRLI 125 + +VI + P DAI E + +V TEG D + AR + RL+ Sbjct: 276 VDLAVIALRPEACLDAIEECAAIGVHSVVIPTEGFTDSDEGRRLQRELVARARRDGMRLL 335 Query: 126 GPNCPGILTPDSCKIG-IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 GP G L I + + R G V + +S L+ + T G+G VG+G Sbjct: 336 GPGSLGFLRTGEDPISLSLAPRMPRPGPVALAGQSSALSAMLLAGTDARGIGLHEFVGVG 395 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 D L+ + D+ I + E G+ +F + + R P++ Sbjct: 396 NRA--DVSLNDTLQHWEDDDQIGVIGLALESMGNP----RKFTRIARRLTRSTPLIVLRP 449 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 + R GH S + + ++ AG+ Sbjct: 450 -PGSESHRPPGHDVRSSSLPRRALDQVLD---SAGVV 482 >gi|257871698|ref|ZP_05651351.1| membrane protein FdrA [Enterococcus casseliflavus EC10] gi|257805862|gb|EEV34684.1| membrane protein FdrA [Enterococcus casseliflavus EC10] Length = 588 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 85/212 (40%), Gaps = 15/212 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC 129 A +V+ +P + A I ++ A + C ++ + + + VR+K + L+GP+C Sbjct: 117 DAKVAVLSIPGTMAAPEIETALAAG-KHVFCFSDNVSLEEEVRLKKMAHEQGLLLMGPDC 175 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP-- 187 + I + + RKG +G++ SGT E + G G + A+G GG Sbjct: 176 GTGILNG---IPVAFTNAVRKGKIGVVGASGTGIQEVTTIIHKLGAGVTQAIGTGGRDLK 232 Query: 188 --VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 V G D + D TE IV++ + + +RG K + F+ Sbjct: 233 EAVGGITMKDSILALENDPDTEVIVVISKPPAP---RVRDEVLALLRRGTKPAVTIFLGE 289 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKE 277 + + A + + A+ + +++ Sbjct: 290 EPTDHEENLYRAYTL----EEAAQLAVQLLRQ 317 >gi|257865368|ref|ZP_05645021.1| membrane protein FdrA [Enterococcus casseliflavus EC30] gi|257799302|gb|EEV28354.1| membrane protein FdrA [Enterococcus casseliflavus EC30] Length = 584 Score = 83.5 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 85/212 (40%), Gaps = 15/212 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC 129 A +V+ +P + A I ++ A + C ++ + + + VR+K + L+GP+C Sbjct: 113 DAKVAVLSIPGTMAAPEIETALAAG-KHVFCFSDNVSLEEEVRLKKMAHEQGLLLMGPDC 171 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP-- 187 + I + + RKG +G++ SGT E + G G + A+G GG Sbjct: 172 GTGILNG---IPVAFTNAVRKGKIGVVGASGTGIQEVTTIIHKLGAGVTQAIGTGGRDLK 228 Query: 188 --VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 V G D + D TE IV++ + + +RG K + F+ Sbjct: 229 EAVGGITMKDSILALENDPDTEVIVVISKPPAP---RVRDEVLALLRRGTKPAVTIFLGE 285 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKE 277 + + A + + A+ + +++ Sbjct: 286 EPTDHEENLYRAYTL----EEAAQLAVQLLRQ 313 >gi|167045555|gb|ABZ10205.1| hypothetical protein ALOHA_HF4000APKG10I20ctg1g1 [uncultured marine crenarchaeote HF4000_APKG10I20] Length = 301 Score = 83.5 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 101/253 (39%), Gaps = 28/253 (11%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL------DMVR 112 + ++ +++ + V+ + + G + + I +V ++ G L Sbjct: 6 YPSLDAIEDK--IDLVVVCIDLAHCGPLMKVCAKKGIHNVVIVSGGGKELGGDRAAMEAE 63 Query: 113 VKARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 VK K R+IGPNC G+ D G R G+V S+SGT+ + Sbjct: 64 VKNLSLKHKIRVIGPNCIGMFNAANRLDCAFQGQARMVRARLGNVAFFSQSGTMGISMLE 123 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 S + G S + G + D++ +D T+ I + E G + +F+ Sbjct: 124 --SADSFGLSKMISYGNR--SDVDEADMILYAGSDPQTKVICLYVEGFG----DGRKFIN 175 Query: 229 DEAK--RGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + + +KKPIV + +G++A + H G++ G E + A K+AGI S Sbjct: 176 TAKRVMKEKKKPIVIWKSGRSAAGAKQAASHTGSL----GGDHEHLMGAFKQAGIISVDS 231 Query: 286 PARIGRSLVELLG 298 + + + L Sbjct: 232 YQEL-TGVAKALA 243 >gi|119715721|ref|YP_922686.1| FdrA family protein [Nocardioides sp. JS614] gi|119536382|gb|ABL80999.1| FdrA family protein [Nocardioides sp. JS614] Length = 471 Score = 83.5 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 75/162 (46%), Gaps = 8/162 (4%) Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 T A A RT +++ VP + A ++++EA ++ ++ +P+ + +K + Sbjct: 107 RTTASALRRTPDAVALVSVPGAHAFVEAMDAVEAG-RDVMVFSDNVPLEQELALKRAAAE 165 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + +G+ ++ G VGI++ SGT + + G+G ++ Sbjct: 166 RGVLVMGPDCGTAVVDG---VGLGFANVVEPGPVGIVAASGTGCQQLLALLDHAGVGVTS 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGG 217 A+G+GG V+G + L D E IV++ + Sbjct: 223 ALGVGGRDLSAEVRGLATREALRRLDEDPGVELIVLISKPPA 264 >gi|291300927|ref|YP_003512205.1| CoA-binding domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290570147|gb|ADD43112.1| CoA-binding domain protein [Stackebrandtia nassauensis DSM 44728] Length = 898 Score = 83.5 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 94/280 (33%), Gaps = 25/280 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G G Q + Y T V IHP + ++ E + ++ Sbjct: 213 GGIGHEILRQILEYDFTGSVYPIHP------HADTIAGQRCYKSLDEVPAA--VDLVIVA 264 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPG 131 VP + D I E+ A V I+ G + + R + RL+GPNC G Sbjct: 265 VPAAAVADVIDEAGRAGARAAVVISSGFAEIGEAGVGAQAELVNRARRHDMRLVGPNCLG 324 Query: 132 ILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 + P + G + + S+SG + + LG + V +G Sbjct: 325 FINTDPRVRLAASFAVDVPEPGGLAVASQSGAVGIAVLHHARGAELGIRSFVSLGNKA-- 382 Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP 249 D+L + D + + E G+ +F + R+KPI+ +G+++ Sbjct: 383 DVSGNDLLSYWFDDPDCRAAALYLESFGNP----RRFARVARAFARQKPILAVKSGRSSG 438 Query: 250 PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 R A + + +++G+ + + Sbjct: 439 GRRAGASHTAAAAAANTTVDSL---FEQSGVIRTDTLGEM 475 >gi|85858637|ref|YP_460839.1| acyl-CoA synthetase [Syntrophus aciditrophicus SB] gi|85721728|gb|ABC76671.1| acyl-CoA synthetase [Syntrophus aciditrophicus SB] Length = 727 Score = 83.5 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 56/292 (19%), Positives = 107/292 (36%), Gaps = 28/292 (9%) Query: 13 VQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT 69 V G T GK G + + + + I+PK + V + + E Sbjct: 288 VIGATSAEGKLGYNVFRNLLFHKFSGKLYPINPK------SDEVQGVKAYRNITEVP--G 339 Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSR 123 + +++ VP + A AI + + +IV T G R++ + R Sbjct: 340 PVDLAIVLVPAAAAIAAIEDCCRKGVKIIVVETAGFAETGEDGKAAQERIREIIRAHGCR 399 Query: 124 LIGPNCPGILTPDSCKI-GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 L+GPNC G++ + I KG++G+ +++G + Sbjct: 400 LLGPNCSGVINTHVGNVQSIGLVDELGKGNIGMTAQAGVYAAGILTGLRHVMD-FGIVAT 458 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 IG D+LE +D+ + + M E S +F+ ++ +KKP++ Sbjct: 459 IGNK--MDISETDILEYLGSDDHIDVVAMYMEDVKSG----RRFIDVASEVTKKKPVIAL 512 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 G+TA + + A ++G A +++GI A + L Sbjct: 513 KGGRTAAGTKVVSSHTASLAGNDEINS---AAFRQSGIIRARDNEHMFGLLK 561 >gi|158313833|ref|YP_001506341.1| CoA-binding domain-containing protein [Frankia sp. EAN1pec] gi|158109238|gb|ABW11435.1| CoA-binding domain protein [Frankia sp. EAN1pec] Length = 977 Score = 83.5 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 100/250 (40%), Gaps = 37/250 (14%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVR 112 + V E + + +VI VP DA+ E +I ++ ++ G + Sbjct: 333 YPDVREIPDA--VDLAVIAVPAPAVADAVRACAEKDIRGLIVVSAGFAEAGPDGRARLAE 390 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 V +S RLIGPN G++ D G VG ++SG L + + Sbjct: 391 VTRLARESGMRLIGPNAMGVINTDPAVRLHATFAAGDPPVGRVGAFTQSGALAGTFLTEA 450 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 S+ +G ST V G DVL+ + +D T+ I++ + G+ +F + Sbjct: 451 SRRAIGLSTFVSTGDR--SDVSANDVLQYWQSDPHTDVIMLHLQGFGNP----RKFARIA 504 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 + GR+KP++ +G++A A+ ++A AG+ + +++ Sbjct: 505 RRVGRRKPVIALKSGRSA-------------------ADPALDALFTSAGVIRVDTLSQL 545 Query: 290 GRSLVELLGS 299 L LL S Sbjct: 546 FD-LAALLAS 554 >gi|167566880|ref|ZP_02359796.1| acetyltransferase, GNAT family protein [Burkholderia oklahomensis EO147] Length = 784 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 107/294 (36%), Gaps = 37/294 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 13 TSVAVVGASPRPGSVGAMVWACVLDGRFGGTIWPVNPK------YGELNGHKVYPYVDQL 66 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV---RVKARLEKSSS 122 + +++ PP+ + + + + I E D R A + Sbjct: 67 PSAPS--VALVCTPPATWPGIVRKLGGLGVRAAIIIGEVRSSTDRAALERTLAAAKPYLL 124 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 125 RIVGPGSLGVVSPVLNAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +G + + DVL+ +D AT +I++ + S A +F+ R KP++ Sbjct: 185 LGSEA--DVDAADVLDYLASDAATRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G+ G +G ++ A + AG+ + + + L Sbjct: 239 RTGR--------GDSGDLL---------YTAAFQRAGMVRVEALDDLLDEIETL 275 >gi|186473110|ref|YP_001860452.1| GCN5-related N-acetyltransferase [Burkholderia phymatum STM815] gi|184195442|gb|ACC73406.1| GCN5-related N-acetyltransferase [Burkholderia phymatum STM815] Length = 807 Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 103/318 (32%), Gaps = 55/318 (17%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPK---KGSTYWTGGNVNVPVFTTVAEAKERTAANAS 74 G G ++ I V ++P+ G ++P TVA Sbjct: 25 GSTGAMVWKRLIEGGFDGPVWAVNPRYDMLDGHACVGNAGDLPDAPTVA----------- 73 Query: 75 VIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR---VKARLEKSSSRLIGPNCPG 131 +I P + + + E A R++GP G Sbjct: 74 IICTPSPTWPGIVHTLGGRGTRAAIIVGEVRGEEGRAHVSDTLAAARPHLLRVVGPGSLG 133 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 I+TP P R G V +S+S LT + GLG S AV +G + Sbjct: 134 IVTPALKAHLGAPSVTVRAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVALGDEA--DV 191 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP-- 249 + DVL+ +D T +I++ + + A +F+ R KP++ +G++ P Sbjct: 192 DAGDVLDYLASDAGTRAILLEVDSVKA----ARKFMSAARAAARNKPVLALRSGRSDPDD 247 Query: 250 ------------------------------PGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 G +I+ +G A +A K AG Sbjct: 248 ALYTAAFRRAGVVRVDALDDLLDEIETLGVGRVAAGATATLITSDRGVATLATDAFKAAG 307 Query: 280 ICIAPSPARIGRSLVELL 297 +AP P +L + L Sbjct: 308 DTLAPCPPGAVDALAQAL 325 >gi|307325044|ref|ZP_07604248.1| GCN5-related N-acetyltransferase [Streptomyces violaceusniger Tu 4113] gi|306889190|gb|EFN20172.1| GCN5-related N-acetyltransferase [Streptomyces violaceusniger Tu 4113] Length = 1001 Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 87/255 (34%), Gaps = 29/255 (11%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------L 108 VP ++ +E + +V+ VP + E E + +V ++ G Sbjct: 301 GVPAHRSLRAIEE--PVDLAVVAVPAERVPAVVAECGEHGVQGLVVLSAGYAESGSEGRD 358 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILTP--DSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + + R+IGPN G+ + + G +G+ ++SG + Sbjct: 359 RQRDLVRQARSYGMRVIGPNAFGVSNTAEGVRLNASLSPQLPNPGRLGLFTQSGAIGIAL 418 Query: 167 VFQTSQEG---------LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGG 217 + + G G ST V G D+L+ + D T+ ++M E G Sbjct: 419 LSGLHRRGAGLASLAGIAGISTFVSAGNRA--DVSGNDLLQYWYDDPRTDVVLMYLESIG 476 Query: 218 SAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKE 277 + +F + + KP+V + T GHA D +++ Sbjct: 477 NP----RKFTRLARRTAAVKPVVVVKGARHTGSAPT-GHAVPTTQIPDATVSDL---LRQ 528 Query: 278 AGICIAPSPARIGRS 292 AG+ + + + Sbjct: 529 AGVIRVDTVTELADT 543 >gi|225412262|ref|ZP_03761451.1| hypothetical protein CLOSTASPAR_05484 [Clostridium asparagiforme DSM 15981] gi|225042227|gb|EEG52473.1| hypothetical protein CLOSTASPAR_05484 [Clostridium asparagiforme DSM 15981] Length = 695 Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 109/296 (36%), Gaps = 34/296 (11%) Query: 7 KNTKVLVQGLTGKAGT--FHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAE 64 K K+ V G + K+G I Y + ++P + P + TV E Sbjct: 8 KPDKICVIGASEKSGFGGDTCRNVIEYMREGSYYFVNPGR------DEVFGKPCYRTVEE 61 Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK-------ARL 117 + + +VI P + + S V G + + + Sbjct: 62 VP--GSFDLAVICTPQGTVEELLKSSRAKGAGAAVVFASGYKEIGSAQGRENQERLTRLC 119 Query: 118 EKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGL 175 ++ L+GPNC G + D + S RKG+VG++S+SG + + G+ Sbjct: 120 KELDMALMGPNCAGFVNYTDDVYPFAFLSESRDRKGTVGVVSQSGQICLSLMD---SPGM 176 Query: 176 GQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 S + G V D LE + DE+T+ + M E + QFL + Sbjct: 177 KFSYVISSGNSAV--VRMEDYLEFLVEDESTKVVAMYLE----GVQNVPQFLDCLKRAAM 230 Query: 236 K-KPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 K KP+V AG++ GR A +G GA+ +A ++ G+ + Sbjct: 231 KRKPVVILKAGRSEKGGR----LAASHTGSLSGADAVFDAVFRKYGVIRVDDVEEL 282 >gi|254500981|ref|ZP_05113132.1| CoA binding domain protein [Labrenzia alexandrii DFL-11] gi|222437052|gb|EEE43731.1| CoA binding domain protein [Labrenzia alexandrii DFL-11] Length = 709 Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 87/261 (33%), Gaps = 26/261 (9%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK+ + + ++ + E + +++ VP S + + Sbjct: 48 PVNPKRP------TVQGLKAYPSITDVPEA--VDCAIVAVPASLVEKTVADCAAMGTKST 99 Query: 99 VCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR--- 149 + + G L R+ A + S RLIGPNC G + + G Sbjct: 100 IIFSSGFAELGAEGAETQQRIAAAAQNSGMRLIGPNCIGAFSVSAGWFGTFSSVQASLRL 159 Query: 150 -KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 G I+S+SG + + G+ V G + + +V+ + + + Sbjct: 160 APGKTAIISQSGAYGAHMFYMAQRRGVATDLWVTTGNE--SDIDVAEVIAYYAEHQDVST 217 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 I+ E + A + R KKP++ G T A ++G Sbjct: 218 IMAYTEGVKDRDRMCAAL---DLARAAKKPVIMIKVGDTDVGAEAAATHTASLAGDDAIY 274 Query: 269 EDKINAMKEAGICIAPSPARI 289 + K+ G+ A S + Sbjct: 275 DAL---FKQYGVYRAHSCQEM 292 >gi|300787341|ref|YP_003767632.1| acyl-CoA synthetase [Amycolatopsis mediterranei U32] gi|299796855|gb|ADJ47230.1| acyl-CoA synthetase [Amycolatopsis mediterranei U32] Length = 875 Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 107/280 (38%), Gaps = 20/280 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G G + V ++P G + VP +VA +V+ Sbjct: 207 GSVGHAVLANLVGSGYPGPVEVVNP------HAGEILGVPSVPSVAVLSR--TPELAVVC 258 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGI-PVLDMVRVKARLEKSSSRLIGPNCPGIL--T 134 +P A +A+ E + + +V I+ G+ + RV A + RL+GPNC G++ Sbjct: 259 LPAPAAAEAVEECGKRGVRAVVIISSGLTGTVHGERVHAAAREYGLRLVGPNCLGVISTD 318 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 P GS R G++G++++SG + GLG ST V G Sbjct: 319 PACPYDLTFLGSRVRPGNIGVVTQSGGVGIALAESLGDLGLGMSTLVSTGDK--YDVSGN 376 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM 254 D+L + AD TE V+ E G+ +F + + R +P++ +G Sbjct: 377 DLLMWWAADRRTELAVLYLESFGNP----RKFSRLARRLARTRPVLAVRSG---SGDTAQ 429 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 A + + A + ++AG+ + A + + Sbjct: 430 RAAASHTAAAATPAVTRDALFEQAGVIAVDTVAELVDVIA 469 >gi|289768619|ref|ZP_06527997.1| acyl-CoA synthetase [Streptomyces lividans TK24] gi|289698818|gb|EFD66247.1| acyl-CoA synthetase [Streptomyces lividans TK24] Length = 649 Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 26/249 (10%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI----PV--L 108 VP +V + + +V+ VP D + E + +V I+ G P Sbjct: 270 GVPACRSVGDI--DGPVDLAVVTVPAEHVPDVVTACGEHGVQGLVVISAGYADSGPEGRE 327 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + R+IGPN GI+ PD + + R G +G+ ++SG + Sbjct: 328 RQRALVRHARTYGMRIIGPNAFGIINTSPDVRLNASLAPEMPRAGRIGLFAQSGAIGIAL 387 Query: 167 VFQTSQE------GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 + + + G ST V G DVL+ + D T+ +M E G+ Sbjct: 388 LSRLHRRGGGVTGVTGVSTFVSSGNRA--DVSGNDVLQYWYDDPQTDVALMYLESIGNPR 445 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 + + + A + G G AP G + + +++AG+ Sbjct: 446 K-FTRLARRTAAAKPLVVVQGARHGGVAPQGHAVRATRLPHATVSAL-------LRQAGV 497 Query: 281 CIAPSPARI 289 + + Sbjct: 498 IRVDTITDL 506 >gi|3850837|emb|CAA10043.1| pimeloyl-CoA synthetase [Pseudomonas mendocina] Length = 711 Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 91/283 (32%), Gaps = 30/283 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 + G + T + ++P + +P + +V E + ++I V Sbjct: 34 RIGGRPIAYMLRNGFTGRILPVNPNR------TEIQGLPAYASVDALPEAP--DVAIIAV 85 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGI 132 P + + + + G + ++ RL+GPN G+ Sbjct: 86 PAPQVLETVQVLGRKGARSAIVFSSGFSEVGEEGVAMQDAIVEAARAANMRLLGPNALGV 145 Query: 133 LTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 + S+ R G VGI ++SG + + Q GLG V G + Sbjct: 146 FNANLGYYAFFSTSLERGIPLAGRVGIATQSGAYGAHLLGLSRQRGLGTPICVATGNEA- 204 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 D + + + ++ E + + A KP++ G++ Sbjct: 205 -DVTLGDAIGWLVESPEVDVVMAYAESIRNVDSFLAALEAAHRAG---KPVILHKVGRSE 260 Query: 249 PPGRTMGHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARI 289 GR A ++G +DK+ + + + A + + Sbjct: 261 LGGRAAMSHTASLAG-----DDKVLDAVLADYAVVRARTTEEL 298 >gi|218779538|ref|YP_002430856.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760922|gb|ACL03388.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 468 Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 95/254 (37%), Gaps = 24/254 (9%) Query: 27 QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA 86 Q + + ++P +T + + +V E + ++I VP S A +A Sbjct: 41 QDMGFKGPIY--PVNP------FTDEIDGLKSYPSVEALPE--PVDMAIILVPNSQAKEA 90 Query: 87 IIESIEAEIPLIVCITEGIPV-------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCK 139 +++ E + V T G + + +K+ RLIGPN G+ +P++ Sbjct: 91 VVQCAEKGVKGAVLFTAGYKETGEEEGAALEEEMASIAKKAGMRLIGPNGMGLYSPEAG- 149 Query: 140 IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL 199 I PG + G + +LS SG++ ++GL AV +G + D LE Sbjct: 150 ISFFPGLPAKLGPIALLSHSGSMANILCRMGPEKGLYFRFAVSLGNE--CDLTAGDFLEY 207 Query: 200 FLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGA 259 D T + E + FLK+ K KP++ + G Sbjct: 208 CAQDSKTGIVAAYLE----GIRKGDVFLKNLKKASENKPVILWKMGLNPEGASAAASHTG 263 Query: 260 VISGGKGGAEDKIN 273 ++G + ++ Sbjct: 264 SMAGDERIWNAVVS 277 >gi|223984586|ref|ZP_03634713.1| hypothetical protein HOLDEFILI_02009 [Holdemania filiformis DSM 12042] gi|223963433|gb|EEF67818.1| hypothetical protein HOLDEFILI_02009 [Holdemania filiformis DSM 12042] Length = 467 Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 96/272 (35%), Gaps = 22/272 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + + + ++P+ + + T+ E +E + + I Sbjct: 33 GKVGHKVIDGLQKWGYQGKIYPVNPR------AEKVAGLKAYPTLREIEE--PVDLAFIA 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK----ARLEKSSSRLIGPNCPGIL 133 VP + + + E+ ++V T + ++ + LIGPN G+ Sbjct: 85 VPAHLVKSILEDCVAKEVKIVVIATSAFKEIGRGELQDELTEYCRANELPLIGPNLVGMG 144 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 +P + G V ++S+SG A+ + ++ G S VG+G +F Sbjct: 145 SPALNFNCGFIPYLPTLGPVAMISQSGANLLAALGTSQKDHYGMSFFVGLGNKA--DVDF 202 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 + + D+ T+ I + E S E F++ KP+V G++ + Sbjct: 203 SEFIAYAGKDDNTKCIAVYMEGLDSPE----AFIEACQSVA--KPVVAIKVGRSPIGVKA 256 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 A + D +AG A + Sbjct: 257 AFAHTASENVRDDAYYD--EVFAQAGALRATT 286 >gi|290955611|ref|YP_003486793.1| CoA-binding protein [Streptomyces scabiei 87.22] gi|260645137|emb|CBG68223.1| putative CoA-binding protein [Streptomyces scabiei 87.22] Length = 857 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 97/279 (34%), Gaps = 19/279 (6%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G G T + ++P + VP +VA + + +V+ Sbjct: 172 GSVGRAVLHHLHTGGFTGRLFAVNPA------AASLLGVPCHPSVAALPQ--TPDLAVLA 223 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 VP + E A + ++ +T G+ + A RL+GPNC G+ D Sbjct: 224 VPAAAVPVTAEECGSAGVRALLVVTSGLDRDQARALMAACRSHGMRLVGPNCLGVSHTDP 283 Query: 138 C--KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 G+ G+ +SG + + S+ G+G S+ +G D Sbjct: 284 AVRLDATFAVGHPSPGTAGVAVQSGGVGIALLDGLSRLGIGVSSFASLGDK--YDVSGND 341 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +L+ + +D T+ ++ E G+ F + + R+ P++ AG+T R Sbjct: 342 MLQWWESDGRTDLALLHLESFGNP----RAFSRTARRVTRRMPVLTVDAGRTEAGRRAA- 396 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 + + + +AG+ S + + Sbjct: 397 --ASHTAAAATPTMTRRALFTQAGVTATGSVGELLETAA 433 >gi|311103480|ref|YP_003976333.1| CoA-binding protein [Achromobacter xylosoxidans A8] gi|310758169|gb|ADP13618.1| CoA binding domain protein 1 [Achromobacter xylosoxidans A8] Length = 700 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 90/247 (36%), Gaps = 24/247 (9%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------R 112 + +V + +++ VP A + E + + +T G + Sbjct: 60 YRSVMDLPNAPQ--TAIVVVPAPAAVSVLAECGRKGVKFAIVLTSGFGETGEAGRQLEEQ 117 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAVF 168 ++A + ++ R+ GPNCPG+ + +G F+ G +G++++ G L + Sbjct: 118 MRAIVRETGIRIYGPNCPGMNNNNRG-LGFTFSPAFQYDRMPGPIGLVTQGGGLGRTFL- 175 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 Q S G+G G + D + A + IV + E A AA L Sbjct: 176 QASGRGIGIGLWCSSGNE--VDLTASDYINHMAAMPEIKVIVTLLEGINDAPRFAAAALN 233 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRT-MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 + KPIV GK+A + H A+ G A+ A ++ GI Sbjct: 234 AARQG---KPIVALKVGKSAYGVKATQSHTAAL----SGSADINSAAFRQLGIVEVDDID 286 Query: 288 RIGRSLV 294 + + Sbjct: 287 ELIDTAA 293 >gi|310764915|gb|ADP09865.1| conserved uncharacterized protein YfiQ [Erwinia sp. Ejp617] Length = 889 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 96/278 (34%), Gaps = 32/278 (11%) Query: 36 VVGGIHPKKGSTYW-------TGGNVNVPV---FTTVAEAKERTA-------ANASVIYV 78 + I P++ +PV + V + +++ Sbjct: 18 IGASIRPERAGYVMMRNLLAGGFSGPVLPVTRKYQAVCGVLTSPDIASLPLSPDLAILCT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 + E + ++ P + +KA + RL+GPN G++ P Sbjct: 78 HARRNLKLLHALAERGCKACIVLSA--PPNQLAELKACASRWQIRLLGPNSLGLIAPWQG 135 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 R+G + +S+S ++ + Q LG S + +G + + L+ Sbjct: 136 LNASFSPVPARQGKLAFISQSSAVSNTILDWAQQRQLGFSWFIALGDSLDIDADDL--LD 193 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 194 FLARDGKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRS-PQAQRLLNT- 247 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GG A D A++ AG+ + ++ L Sbjct: 248 ---QGGMDAAWD--AAIQRAGLLRVQDTHELFSAVETL 280 >gi|269792026|ref|YP_003316930.1| FdrA family protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099661|gb|ACZ18648.1| FdrA family protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 517 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 12/186 (6%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPN 128 AN +VI V AGD ++ I ++ ++ ++ +P+ + VK + ++GP+ Sbjct: 118 PEANLAVISVAGRYAGDVAMDCIAKDLN-VMLYSDNVPLEKEIEVKRAAAEKGLLVMGPD 176 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 C ++ + I + G V I++ +GT E Q ++ G+G +G GG V Sbjct: 177 CGTVVIRG---VAIGMANSCPTGPVSIVAAAGTGLQEVHVQLARRGVGTLHGIGTGGRDV 233 Query: 189 ---KGTEFID-VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 G ++ L L D + +V+VG+ EE L RG KP+V Sbjct: 234 KSQVGGIMVEMASRLLLEDHEVQVLVIVGKPPAPEVEERILHL----ARGSSKPVVLGFV 289 Query: 245 GKTAPP 250 G A Sbjct: 290 GGKAKG 295 >gi|259907577|ref|YP_002647933.1| hypothetical protein YfiQ [Erwinia pyrifoliae Ep1/96] gi|224963199|emb|CAX54683.1| conserved uncharacterized protein YfiQ [Erwinia pyrifoliae Ep1/96] gi|283477419|emb|CAY73335.1| Uncharacterized protein yfiQ [Erwinia pyrifoliae DSM 12163] Length = 889 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 96/278 (34%), Gaps = 32/278 (11%) Query: 36 VVGGIHPKKGSTYW-------TGGNVNVPV---FTTVAEAKERTA-------ANASVIYV 78 + I P++ +PV + V + +++ Sbjct: 18 IGASIRPERAGYVMMRNLLAGGFSGPVLPVTRKYQAVCGVLTSPDIASLPLLPDLAILCT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 + E + ++ P + +KA + RL+GPN G++ P Sbjct: 78 HARRNLKLLHALAERGCKACIVLSA--PPNQLAELKACASRWQIRLLGPNSLGLIAPWQG 135 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 R+G + +S+S ++ + Q LG S + +G + + L+ Sbjct: 136 LNASFSPVPARQGKLAFISQSSAVSNTILDWAQQRQLGFSWFIALGDSLDIDADDL--LD 193 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E +A +F+ R KPI+ +G++ P + + + Sbjct: 194 FLARDGKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRS-PQAQRLLNT- 247 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 GG A D A++ AG+ + ++ L Sbjct: 248 ---QGGMDAAWD--AAIQRAGLLRVQDTHELFSAVETL 280 >gi|23015244|ref|ZP_00055026.1| COG1042: Acyl-CoA synthetase (NDP forming) [Magnetospirillum magnetotacticum MS-1] Length = 891 Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 56/304 (18%), Positives = 100/304 (32%), Gaps = 29/304 (9%) Query: 1 MSI----LVDKNTKVLVQGLTGK---AGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGN 53 MSI + + T V V G + + AG+ + + +HP Sbjct: 8 MSIHNLSFLFEPTSVAVIGASDRPRSAGSVVMRNLLAAGFKGPIMPVHPS------HRAV 61 Query: 54 VNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV 113 V + VA + +V+ P + + V I + D + Sbjct: 62 AGVLAYRDVASMP--LTPDLAVLCTPGETVPKMLDDLGRRGTKAAVVIAGDV---DKDAM 116 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 A R++G G+L P G V +S+SG L+ + Sbjct: 117 LAAARPWGLRILGGGALGLLVPRIRLDASFSHVPALPGKVAFVSQSGALSTAVLDWARPR 176 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G+G S + +G +F DV++ D+ T +I++ E G+ F+ Sbjct: 177 GIGFSHFISLG--DAHDIDFADVMDYLANDDQTRAILLYIESIGAR----RNFIPAARAA 230 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRS 292 R KP++ A A G ++ ED A++ AG + + Sbjct: 231 ARNKPVLLVRAVPQAD----DHPMGKFLAESLARPEDAFDAAIRRAGALRVNDIDELFGA 286 Query: 293 LVEL 296 + L Sbjct: 287 VETL 290 >gi|297197541|ref|ZP_06914938.1| acyl-CoA synthetase [Streptomyces sviceus ATCC 29083] gi|197715587|gb|EDY59621.1| acyl-CoA synthetase [Streptomyces sviceus ATCC 29083] Length = 897 Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 92/246 (37%), Gaps = 13/246 (5%) Query: 51 GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM 110 + VP ++ + +V+ VP + E +A + ++ +T G+ Sbjct: 239 HSILGVPCHPAISSLPR--TPDLAVLAVPAAAIPATAEECGKAGVRALLVVTAGLDADQA 296 Query: 111 VRVKARLEKSSSRLIGPNCPGI--LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + + RL+GPNC GI P+ R G+ G+ +SG + + Sbjct: 297 RALLSACRTHGMRLVGPNCLGISNTDPELSLDATFAADHPRPGTAGVAVQSGGVGIALLD 356 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 S+ G+G S+ V +G D+L+ + +D T+ ++ E G+ F + Sbjct: 357 GLSRLGIGVSSFVSLGDK--YDVSGNDMLQWWESDGRTDLALLHLESFGNP----RAFSR 410 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + R+ P++ AG+T R A + + +AGI S Sbjct: 411 TARRVTRRMPVLTVDAGRTDAGRRAAASHTAAAATPTMTRQAL---FTQAGITPTRSVGE 467 Query: 289 IGRSLV 294 + + Sbjct: 468 LLETAA 473 >gi|237751481|ref|ZP_04581961.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] gi|229372847|gb|EEO23238.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] Length = 650 Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 104/291 (35%), Gaps = 30/291 (10%) Query: 7 KNTKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 KN +V++ G + GK G + A + + ++ KG + + +V+ Sbjct: 230 KNERVVIVGASTEKGKTGYTIAKNAQSFKGELLY--VNA-KGGELFGKKL-----YKSVS 281 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV----LDMVRVKARLEK 119 E + +VI + I E ++ + ++ IT G + + Sbjct: 282 EI--EGDIDTAVIVIGAKFVIPTIHELVKKGLKNLIIITAGFKESGHDAEEEEIGRLAAT 339 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + +IGPNC G + + GS +S+SG + + + ++ GLG S Sbjct: 340 HNFNVIGPNCLGFYANEEKLNITFGTGMVHDGSHAFVSQSGAVLASLMDRAAELGLGFSH 399 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + +G +++ + ++ ESI + E + + +++ KPI Sbjct: 400 LISVGNA--VDLRSAEIIPMLNNAKSCESIALYLEGVARG-KSLCESIRNCN-----KPI 451 Query: 240 VGF-VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 F A A H G + G M+ G+ + + + Sbjct: 452 YLFKAAKSEAAKKAAFSHTGNL----SGNYAMFNGIMQSLGVKVVNTLDSL 498 >gi|111225052|ref|YP_715846.1| hypothetical protein FRAAL5694 [Frankia alni ACN14a] gi|111152584|emb|CAJ64326.1| Hypothetical protein; putative NAD(P)-binding Rossmann-fold and GCN5-related N-acetyltransferase domains [Frankia alni ACN14a] Length = 881 Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 92/243 (37%), Gaps = 10/243 (4%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G G + V ++P + ++ ++ + + + +V+ Sbjct: 226 GSVGNSVLRHLLTGGFDGPVYPVNP--AAAAAGTAVASIRAYSGIEQVPR--PIDLAVVC 281 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 VPP+ + A + +V +T+ + A R++GP GI P Sbjct: 282 VPPAEVPGVVAACGRAGVWGLVVLTDQRDDAADAALAAEARADGMRVVGPASMGIQNPAG 341 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 M + G VG S+SG + + G+G S V G D+L Sbjct: 342 GLNASMVPKMPPAGRVGCYSQSGPFGGAILAAAAARGVGLSVFVSAGDRA--DVSGNDLL 399 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + + D T++++M E G+ +F + + GR+KPIV +G++A + A Sbjct: 400 QYWEEDPETDAVIMHLETFGNP----RKFARLARRLGRRKPIVTVYSGRSALDDALLRQA 455 Query: 258 GAV 260 G + Sbjct: 456 GVI 458 >gi|29828959|ref|NP_823593.1| acyl-CoA synthetase (NDP forming type) [Streptomyces avermitilis MA-4680] gi|29606064|dbj|BAC70128.1| putative acyl-CoA synthetase [Streptomyces avermitilis MA-4680] Length = 949 Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 90/249 (36%), Gaps = 26/249 (10%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------L 108 VP +V + E + +V+ VP + +A+ E E + +V ++ G Sbjct: 260 EVPAHRSVLDIAE--PVDLAVVAVPAAHVPEAVAECGEHGVQGLVVVSSGYAESGPEGRE 317 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + ++ RLIGPN G++ P+ + R G +G+ ++SG + Sbjct: 318 RQRELVRQIRTYGMRLIGPNAFGVINTSPEVRLNASLAPETPRPGRIGLYAQSGAIGIAL 377 Query: 167 VFQTSQE------GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 + + + G ST V G DVL+ + D T+ +M E G+ Sbjct: 378 LSRLHRRGGGVTGDTGVSTFVSSGNRA--DVSGNDVLQYWYDDPDTDVALMYLESIGNPR 435 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 + + + A + G G AP G + + +++AG+ Sbjct: 436 K-FTRLARRTAAAKPLVVVQGARHGGAAPQGHAVRATRLPHATVSAL-------LRQAGV 487 Query: 281 CIAPSPARI 289 + + Sbjct: 488 IRVDTITEL 496 >gi|91778208|ref|YP_553416.1| putative acyl-CoA synthetase [Burkholderia xenovorans LB400] gi|91690868|gb|ABE34066.1| Putative acyl-CoA synthetase [Burkholderia xenovorans LB400] Length = 709 Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 98/293 (33%), Gaps = 27/293 (9%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 +V G + F + + + G I+P P F+ + Sbjct: 22 AIV-GASEDQSKFGGRLLRMVLRHRFAGTIYPINAKRDTLFEIKAYPDFSALPAV----- 75 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR------LEKSSSRL 124 + V+ VP AI + + I + IT G +A + RL Sbjct: 76 PDMVVLAVPQPAVKPAIEAAAKMGICCGLIITSGFSDAGDAGREAENEIVGIAREHGMRL 135 Query: 125 IGPNCPGILTPDSCKIG----IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 IGPNC G+++ + ++ + +G++S+SG L + G+G S Sbjct: 136 IGPNCLGLISAANRLAACSSPVLEIPELPQQPIGLVSQSGALMTTFFDRAWSHGIGFSHG 195 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 + +G E D +E D T+ I E + + + R KP + Sbjct: 196 ISVGNQA--DLELADFVEFLADDPDTQVICTYIEGVKNTQ---RFIAAAQCARAAGKPWL 250 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 +G+T R A I+ G A E GI + IG + Sbjct: 251 AVKSGRTEAGSRAAFSHTASIA---GDHAVFAAACAEQGIVLMN---DIGAMM 297 >gi|114761144|ref|ZP_01441059.1| CoA-binding protein [Pelagibaca bermudensis HTCC2601] gi|114545392|gb|EAU48394.1| CoA-binding protein [Roseovarius sp. HTCC2601] Length = 701 Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 90/259 (34%), Gaps = 30/259 (11%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK + +P + +A E + I VP + + + + + Sbjct: 48 PVNPK------ADTILGMPCYPDIASLPEAP--DHVGIVVPGKAIPGVLKQCGDRGVRHV 99 Query: 99 VCITEGIPV-------LDMVRVKARLEKSSSRLIGPNCPGILT----PDSCKIGIMPGSI 147 + G + A + RL+GPNC G++ + G Sbjct: 100 TIFSSGFSEGGSADGAAFQAEIVALAREHGIRLMGPNCNGLINYVDGFALTSTATINGPR 159 Query: 148 FRKGSVGILSRSGTLTYE-AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 KG V +L SG L +++ Q GLG S V G D + +D + D T Sbjct: 160 APKGDVAVLGHSGGLAQVNVMYRAQQAGLGISYQVSCGNDA--DLDILDYAAFMVDDPET 217 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP-PGRTMGHAGAVISGGK 265 I+M+ E + A + R KPIV G++ + H GA+ S Sbjct: 218 RVILMLAETIRDGGKLRA---LSDRARAADKPIVMMKLGRSEEGMQAAVSHTGALASSDS 274 Query: 266 GGAEDKINAMKEAGICIAP 284 + +++ GI Sbjct: 275 VADDV----LRQLGILRVD 289 >gi|296270205|ref|YP_003652837.1| FdrA family protein [Thermobispora bispora DSM 43833] gi|296092992|gb|ADG88944.1| FdrA family protein [Thermobispora bispora DSM 43833] Length = 457 Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 14/191 (7%) Query: 60 TTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119 T A A ++ VP A +++IEA + ++ ++ +PV + +K R + Sbjct: 103 RTTRSAARSWDATMVLVSVPGEHAFAEALDAIEAGLS-VMIFSDNVPVEQEILLKDRARE 161 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + + G+ ++ R G VG+++ SGT + G+G S Sbjct: 162 RGVLVMGPDCGTAVVAGA---GLGFANVLRPGPVGVVAASGTGAQQVTSLLDHAGVGVSH 218 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 +G+GG V G + L D ATE IV++ + A + L G Sbjct: 219 VLGVGGRDLSAEVGGRSAVQALRALDEDPATELIVLISKPPAPEAAAAVREL------GL 272 Query: 236 KKPIVGFVAGK 246 KP+V + G Sbjct: 273 TKPVVYALLGP 283 >gi|331698817|ref|YP_004335056.1| CoA-binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326953506|gb|AEA27203.1| CoA-binding domain protein [Pseudonocardia dioxanivorans CB1190] Length = 680 Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 91/257 (35%), Gaps = 18/257 (7%) Query: 45 GSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEG 104 G + ++ ++A A + ++I VP + E++ + V G Sbjct: 40 GGRLALVNGRDGTMYPSLAAAAADGPVDLAMICVPAPACPGVLAEAVAVGVGAAVICAGG 99 Query: 105 IPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIM--PGSIFRKGSVGIL 156 + A + S RL+GPN G L P + + G V ++ Sbjct: 100 FAEAGGPGVGYQDELAAVVRDSGIRLLGPNTSGFLVPPRALTASFVPGAASVQAGRVAVV 159 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIG 216 + SG + + F ++ G G S AVG+G DVL D +T ++ + E Sbjct: 160 AASGGVNHALAFLLAEAGHGISLAVGLGNG--VDVTAPDVLAHLATDASTGAVALHVESV 217 Query: 217 GSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMK 276 + ++ A K +V V G+ H GA+ + + A+ Sbjct: 218 A----DGPALVEAVATLVPHKAVVALVVGRNDVAEFAASHTGALATSWRIT----RAALA 269 Query: 277 EAGICIAPSPARIGRSL 293 +AG + + ++ Sbjct: 270 QAGAVLVDDERELVDAV 286 >gi|322831467|ref|YP_004211494.1| GCN5-related N-acetyltransferase [Rahnella sp. Y9602] gi|321166668|gb|ADW72367.1| GCN5-related N-acetyltransferase [Rahnella sp. Y9602] Length = 906 Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 94/279 (33%), Gaps = 23/279 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+AG + V + P V + VA + + +++ Sbjct: 25 GRAGYLMMRNLLDSGFNGPVLPVTPA------YRAVCGVLTWRDVASLP--MSPDLAILC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + E ++ ++ V +K ++ S RL+GPN GIL P Sbjct: 77 THADRNLALLEQLGERGCKTVIVLSS--QPQQFVELKTSAQRFSMRLLGPNSLGILAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 G + +S+S + + Q +G S V +G + + L Sbjct: 135 KLNASFSPVPILPGKLAFISQSAAVANTILDWAQQRAVGFSYFVSLGDSLDIDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +FL R KPI+ +G+ G A Sbjct: 193 DFLARDSKTSAILLYLEHIS----DARRFLSASRSASRNKPILVIKSGR-------SGQA 241 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +++ A++ AG+ + ++ L Sbjct: 242 QQLLNSPLSLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|311106363|ref|YP_003979216.1| CoA-binding protein [Achromobacter xylosoxidans A8] gi|310761052|gb|ADP16501.1| CoA binding domain protein 2 [Achromobacter xylosoxidans A8] Length = 693 Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 98/286 (34%), Gaps = 28/286 (9%) Query: 20 AGTFHTEQAILYCQTQ-VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +T + + + + G ++P G P + + + + Sbjct: 24 DARKNTARPLRFMRKHGYAGAVYPINAGRPEILGEKAYPSLAGLPGPVDHV-----FVMI 78 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGI 132 P S + + +A ++ ++G + A+ RL+GPN G Sbjct: 79 PGSEVAAMLAQCAQAGARVVTIYSDGFGETGAEGQARQAALVAQARALGLRLLGPNSIGS 138 Query: 133 LTPDSCKI----GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 + I G + ++S+SG++ + + + G G + +V +G + Sbjct: 139 ANLHTGGILSVNAAFEADTLLAGDLSLVSQSGSMMGSLLSRAAARGFGFAKSVSVGNE-- 196 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 +V++ + D T++I++ E A A R KP++ + G++ Sbjct: 197 SDITVGEVVDALVDDPQTKAILLFLETLRDA---ATLARALSRARAAGKPVIAYKLGRSE 253 Query: 249 PP-GRTMGHAGAVISGGKGGAEDKINAMKEA-GICIAPSPARIGRS 292 H GA+ + ++A +A G+ + + Sbjct: 254 QGDALAQSHTGAMAGN-----DVAVDAFLKAYGVMRVRNLETLFEL 294 >gi|21224186|ref|NP_629965.1| hypothetical protein SCO5842 [Streptomyces coelicolor A3(2)] gi|2661695|emb|CAA15799.1| conserved hypothetical protein SC9B10.09 [Streptomyces coelicolor A3(2)] Length = 1039 Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 26/249 (10%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI----PV--L 108 VP +V + + +V+ VP D + E + +V I+ G P Sbjct: 260 GVPACRSVGDI--DGPVDLAVVTVPAEHVPDVVTACGEHGVQGLVVISAGYADSGPEGRE 317 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + R+IGPN GI+ PD + + R G +G+ ++SG + Sbjct: 318 RQRALVRHARTYGMRIIGPNAFGIINTSPDVRLNASLAPEMPRAGRIGLFAQSGAIGIAL 377 Query: 167 VFQTSQE------GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 + + + G ST V G DVL+ + D T+ +M E G+ Sbjct: 378 LSRLHRRGGGVTGVTGVSTFVSSGNRA--DVSGNDVLQYWYDDPQTDVALMYLESIGNPR 435 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 + + + A + G G AP G + + +++AG+ Sbjct: 436 K-FTRLARRTAAAKPLVVVQGARHGGVAPQGHAVRATRLPHATVSAL-------LRQAGV 487 Query: 281 CIAPSPARI 289 + + Sbjct: 488 IRVDTITDL 496 >gi|269302772|gb|ACZ32872.1| putative succinyl-CoA ligase [ADP-forming], alpha subunit [Chlamydophila pneumoniae LPCoLN] Length = 95 Score = 82.8 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 43/89 (48%), Positives = 63/89 (70%), Gaps = 4/89 (4%) Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 +++GEIGGSAEEEAA +++ KP+V F+AG TAP G+ MGHAGA+ISG G A Sbjct: 6 FLIIGEIGGSAEEEAAAWIQAHC----TKPVVAFIAGVTAPKGKRMGHAGAIISGNSGDA 61 Query: 269 EDKINAMKEAGICIAPSPARIGRSLVELL 297 + KI ++E+G+ + SPA IG+++ +L Sbjct: 62 KSKIQVLRESGVTVVESPAHIGKTVDAVL 90 >gi|219664375|gb|ACL31225.1| pimeloyl-CoA synthetase [Rhodococcus sp. TFB] Length = 706 Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 88/262 (33%), Gaps = 27/262 (10%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P++ +P T+ E + ++I V +A+ + IP Sbjct: 44 PVNPRRA------MVQGLPAVATIEEITND-DVDLALIMVEAGRVAEAVRACGKRGIPAA 96 Query: 99 VCITEGIPV-----LDMVRVKARLEKSSSRLIGPNCPGILTPD-----SCKIGIMPGSIF 148 + G ++A +E+S RL+GPNC G++ + + + Sbjct: 97 IACASGFAETAGGVRLQDELRAAVEESGVRLLGPNCLGMIGLHDRAVPTFTTALDNITDL 156 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 G + +S+SG Q Q GLG S + G + ++L + D + Sbjct: 157 AVGPIAFVSQSGAFGSLIFSQAQQMGLGMSHFITTGNE--VDLSVPELLNALVDDPHAQV 214 Query: 209 IVMVGEIGGSAEEEAAQFLK-DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 ++ E + + ++ KP++ G++ I+G Sbjct: 215 LLTYLE----GVADGRELIEAARKADAADKPLIAVKVGRSTSGAAAARSHTGAIAGSDAV 270 Query: 268 AEDKINAMKEAGICIAPSPARI 289 + + G+ S + Sbjct: 271 FDGFADEF---GVIRPDSMGEM 289 >gi|33595234|ref|NP_882877.1| putative acyl-CoA synthetase [Bordetella parapertussis 12822] gi|33565311|emb|CAE36111.1| putative acyl-CoA synthetase [Bordetella parapertussis] Length = 710 Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 74/206 (35%), Gaps = 16/206 (7%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRL 124 + ++ +P A+ + + ++ + G ++ A + + R+ Sbjct: 85 PDLVILAIPRDLVVQAVSDCGDIGAKGVIVVASGFSESGDEGARLEQQLLAVAREKAVRI 144 Query: 125 IGPNCPGILTPDSCK-IGIMPG---SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 IGPNC G+++P + G +G++S+SG + + + + +G S Sbjct: 145 IGPNCVGVVSPAHGFSLATTVSLVDRAPLPGHIGLISQSGAVMGTMIDRGISQNVGFSHC 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 + +G +F D ++ + D T I E + + KP + Sbjct: 205 ISVGNQA--DVDFCDFVDFMIDDPGTHVICTYVEGIKRPDLFLRA---AGRAQAASKPWL 259 Query: 241 GFVAGKT-APPGRTMGHAGAVISGGK 265 +G+T A H ++ S Sbjct: 260 LMKSGRTEAGAASAFSHTASLASNQA 285 >gi|297517272|ref|ZP_06935658.1| succinyl-CoA synthetase subunit alpha [Escherichia coli OP50] Length = 84 Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 4/88 (4%) Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 M+GEIGGSAEEEAA ++K+ KP+VG++AG TAP G+ MGHAGA+I+GGKG A++ Sbjct: 1 MIGEIGGSAEEEAAAYIKEHV----TKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADE 56 Query: 271 KINAMKEAGICIAPSPARIGRSLVELLG 298 K A++ AG+ S A IG +L +L Sbjct: 57 KFAALEAAGVKTVRSLADIGEALKTVLK 84 >gi|94312844|ref|YP_586053.1| putative acetyl-CoA synthetase [Cupriavidus metallidurans CH34] gi|93356696|gb|ABF10784.1| putative acetyl-CoA synthetase [Cupriavidus metallidurans CH34] Length = 703 Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 84/265 (31%), Gaps = 25/265 (9%) Query: 37 VGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIP 96 V ++P + F TV E + +++ VP A D + + A Sbjct: 42 VFPVNPG------ADTVQGLRAFPTVEAIGE--PVDLAIVAVPALAAPDVMAQLGRAGTR 93 Query: 97 LIVCITEGIPVLDMVRVKARL-----EKSSSRLIGPNCPGILTPDSCKIGIMPG----SI 147 V T G + + +L+GPNC G + + Sbjct: 94 AAVVFTSGFAEVANGSGLQHALATQAKTHGVQLLGPNCLGAMNLGERMFATFSPIPLTGV 153 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 G VG++S+SG A + GLG S V G + G + DV+E D T+ Sbjct: 154 PPVGGVGLVSQSGAFGAYAFALAREAGLGLSHWVTTGNEA--GLQVADVIEWLAHDPQTQ 211 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 I+ E A KP+V G T A ++G Sbjct: 212 VILAYIEGARDGMRLRQALAAARAAG---KPVVIAKVGTTVAGASAAQSHTASLAGEDAV 268 Query: 268 AEDKINAMKEAGICIAPSPARIGRS 292 + + E G+ A + R Sbjct: 269 YQAVFD---EYGVHRAHTLEAFFRL 290 >gi|238063481|ref|ZP_04608190.1| GCN5 N-acetyltransferase [Micromonospora sp. ATCC 39149] gi|237885292|gb|EEP74120.1| GCN5 N-acetyltransferase [Micromonospora sp. ATCC 39149] Length = 682 Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 16/177 (9%) Query: 115 ARLEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQ 172 + R++GPNC G+ D + ++ G VGI S+SGT + + ++ Sbjct: 310 RAAHAAGMRVVGPNCLGVANTDEDVRLNATLAPALPAPGRVGIFSQSGTFGVALLAEAAR 369 Query: 173 EGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 GLG S+ V G D+L+ + D T+ I++ E G+ +F + + Sbjct: 370 RGLGLSSFVSAGNRA--DVSGNDLLQYWQDDPGTDVIMLYLETFGNP----RKFARLARR 423 Query: 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 GR KP+V A PPG G G A + ++G+ + A + Sbjct: 424 IGRDKPVVAL-ASPARPPGV-----GGDAPGPDEVAVSAL--FAQSGVIRVDTVAEL 472 >gi|33599522|ref|NP_887082.1| putative acyl-CoA synthetase [Bordetella bronchiseptica RB50] gi|33567118|emb|CAE31032.1| putative acyl-CoA synthetase [Bordetella bronchiseptica RB50] Length = 710 Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 74/206 (35%), Gaps = 16/206 (7%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRL 124 + ++ +P A+ + + ++ + G ++ A + + R+ Sbjct: 85 PDLVILAIPRDLVVQAVSDCGDIGAKGVIVVASGFSESGDEGARLEQQLLAVAREKAVRI 144 Query: 125 IGPNCPGILTPDSCK-IGIMPG---SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 IGPNC G+++P + G +G++S+SG + + + + +G S Sbjct: 145 IGPNCVGVVSPAHGFSLATTVSLVDRAPLPGHIGLISQSGAVMGTMIDRGISQNVGFSHC 204 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 + +G +F D ++ + D T I E + + KP + Sbjct: 205 ISVGNQA--DVDFCDFVDFMIDDPGTHVICTYVEGIKRPDLFLRA---AGRAQAASKPWL 259 Query: 241 GFVAGKT-APPGRTMGHAGAVISGGK 265 +G+T A H ++ S Sbjct: 260 LMKSGRTEAGAASAFSHTASLASNQA 285 >gi|257874961|ref|ZP_05654614.1| membrane protein FdrA [Enterococcus casseliflavus EC20] gi|257809127|gb|EEV37947.1| membrane protein FdrA [Enterococcus casseliflavus EC20] Length = 584 Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 80/204 (39%), Gaps = 11/204 (5%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC 129 A +V+ +P + A I ++ A + C ++ + + + VR+K + L+GP+C Sbjct: 113 DAKVAVLSIPGTMAAPEIETALAAG-KHVFCFSDNVSLEEEVRLKKMAHEQGLLLMGPDC 171 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP-- 187 + I + + RKG +G++ SGT E + G G + A+G GG Sbjct: 172 GTGILNG---IPVAFTNAVRKGKIGVVGASGTGIQEVTTIIHKLGAGVTQAIGTGGRDLK 228 Query: 188 --VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 V G D + D TE IV++ + + +RG K + F+ Sbjct: 229 EAVGGITMKDSILALEHDPDTEVIVVISKPPAP---RVRDEVLALLRRGTKPAVTIFLGE 285 Query: 246 KTAPPGRTMGHAGAVISGGKGGAE 269 + + A + + + Sbjct: 286 EPTDHEENLYRAYTLEEAAQLAVQ 309 >gi|328953449|ref|YP_004370783.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109] gi|328453773|gb|AEB09602.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109] Length = 690 Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 102/277 (36%), Gaps = 33/277 (11%) Query: 27 QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA 86 Q Y V +HP G + V+ +A+ E + +VI V Sbjct: 31 QRFGYRGAVYV--VHP------HAGEILGQKVYQRLADIPEVP--DLAVIAVGRDRVLPV 80 Query: 87 IIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCKI 140 E I ++ IT+G D + +R+IGPN G++ + Sbjct: 81 AEECFAKGIRWLIIITQGFADADREGKRLQEALVTAARHCQARIIGPNTMGVMNAFNGFT 140 Query: 141 GIMP--GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 V ++++SG L + ++ LG AV IG G F++VLE Sbjct: 141 TAFVDLPRSPDPAPVSLVAQSGAL--QVGSESFLGPLG--KAVDIGNAADLG--FVEVLE 194 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHA 257 D T I + E + +FL+ + R KP+V F G +A + + H Sbjct: 195 YLEQDPQTRIIALHIE----GLIQGRRFLETADRINRSKPVVIFKTGVSASGAQAALSHT 250 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 G+++ G + A+ AG+ S + +L Sbjct: 251 GSMV----GEDQIFSAAVARAGLSRVHSALDLQDTLQ 283 >gi|167770179|ref|ZP_02442232.1| hypothetical protein ANACOL_01522 [Anaerotruncus colihominis DSM 17241] gi|167667501|gb|EDS11631.1| hypothetical protein ANACOL_01522 [Anaerotruncus colihominis DSM 17241] Length = 522 Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 83/210 (39%), Gaps = 15/210 (7%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPG 131 N +VI VP A + ++ +I ++ ++ + + + R+K ++GP+C Sbjct: 119 NMAVISVPGKYAAEVAQSCLDKDIN-VMLFSDNVTIDEEKRLKECAASKGLLMMGPDCGT 177 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP---- 187 + + + ++ + G +GI+ SGT T E Q G G S +G GG Sbjct: 178 AII---NNVPLAFANVVKPGDIGIVGASGTGTQEVSSLIDQFGGGCSQVLGTGGRDLKLE 234 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + G L+ + D T+ I ++ + EE A + +A K +V F+ G Sbjct: 235 IGGIMMTLGLDALINDPMTKVITLISKPPA---EEIADKILKQAAGAGKPVVVCFIGGDP 291 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKE 277 A + A A K A + Sbjct: 292 AQVEKYGLTAAC----SLEDAARKAVAFSK 317 >gi|238787889|ref|ZP_04631685.1| hypothetical protein yfred0001_13750 [Yersinia frederiksenii ATCC 33641] gi|238723837|gb|EEQ15481.1| hypothetical protein yfred0001_13750 [Yersinia frederiksenii ATCC 33641] Length = 885 Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 97/281 (34%), Gaps = 29/281 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHP-KKG--STYWTGGNVNVPVFTTVAEAKERTAANASV 75 +AG + + + P K ++P+ + ++ Sbjct: 31 RAGFLMMRNLLDGGFNGPILPVTPTHKAVCGVLAYANIASLPI-----------TPDLAI 79 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + S + + ++ ++ +KA ++ RL+GPN G+L P Sbjct: 80 LCTHNSRNLTLLEDLGTHGCKAVIILSA--ATEQFSELKACAQRHHMRLLGPNSLGLLAP 137 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 +KG + +S+S + + Q +G S + +G + + Sbjct: 138 WQGLNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIALGDSLDIDVDDL- 196 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 L+ D T +I++ E +A +FL R KPI+ +G++ Sbjct: 197 -LDFLARDGKTSAIMLYIEHIS----DARRFLSASRSASRNKPILVVKSGRSQ------- 244 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A +++G +G A++ AG+ + ++ L Sbjct: 245 RAQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 285 >gi|167725154|ref|ZP_02408390.1| acetyltransferase, GNAT family protein [Burkholderia pseudomallei DM98] Length = 528 Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 108/296 (36%), Gaps = 38/296 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G V+ V + Sbjct: 79 TAVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKVYPYVDQL 132 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---GIPVLDMVRVKARLEKSSS 122 + ++I PP+ + + + + I E G + R A + Sbjct: 133 PSAPS--VALICTPPATWPGIVRKLGGLGVRAAIIIGEARSGADRAALERALAAAKPYLL 190 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 191 RVVGPGSLGVVSPALGAHFGAPACIVKVGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 250 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D T +I++ + S A +F+ R KP++ Sbjct: 251 LGGEA--DVDAADVLDYLASDAETRTILLELDTVKS----ARKFMSAARAAARNKPVLAL 304 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 AG+ G G A + AG+ + + + E LG Sbjct: 305 RAGR-----------------GDSGDLLYTAAFQRAGMVRVDALDDLLDEI-EALG 342 >gi|330827051|ref|YP_004390354.1| CoA-binding domain-containing protein [Alicycliphilus denitrificans K601] gi|329312423|gb|AEB86838.1| CoA-binding domain protein [Alicycliphilus denitrificans K601] Length = 695 Score = 82.0 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 89/273 (32%), Gaps = 23/273 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P + G+ + + ++A E + +VI + A+ E + Sbjct: 39 YRGTVYPINPAREEIQGHRS---YASLAALPEVP--DLAVIALGGDKTVAAVEECAARGV 93 Query: 96 PLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIG----IMPG 145 V I G + AR + RL GPN G+ + I + Sbjct: 94 KGAVVIASGFGETGPAGRELQDHMVARARAAGMRLYGPNTQGLANFGTGAIAGFSTMFIE 153 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 G VGI+S+SG ++ A GLG G + ++ D Sbjct: 154 VPPMDGPVGIVSQSGGMSSVAYGLVRGRGLGVRHVHATGNEA--DVTVAEMAWAVAHDPG 211 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK 265 + +++ E E AA R R PIV AG+TA + ++ Sbjct: 212 VKLLLLYLESIAQPEMLAA---TAAYARERDLPIVAVKAGRTAGGQKAASSHTGALANED 268 Query: 266 GGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + ++ GI P R+ L Sbjct: 269 RTVD---AFLRHHGIWRVRDPHEQARAAHAYLK 298 >gi|238755725|ref|ZP_04617059.1| hypothetical protein yruck0001_6060 [Yersinia ruckeri ATCC 29473] gi|238706092|gb|EEP98475.1| hypothetical protein yruck0001_6060 [Yersinia ruckeri ATCC 29473] Length = 880 Score = 82.0 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 97/280 (34%), Gaps = 23/280 (8%) Query: 17 TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVI 76 T +AG + + + + P S G + P ++ + +++ Sbjct: 24 TDRAGFLMMRNLLDGGFSGPILPVTP---SHKAVCGVLAYPNIASLPLT-----PDLAIL 75 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD 136 S + + ++ ++ P +KA + + RL+GPN G+L P Sbjct: 76 CTNASRNLHLLNDLGTRGCKTVIILSA--PPEQFAELKACAQGYNMRLLGPNSLGLLAPW 133 Query: 137 SCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 KG + +S+S + + Q +G S + +G + + Sbjct: 134 QGLNASFSPVPILKGKLAFISQSAAVANTVLDWAQQREVGFSYFIALGDSLDIDVDDLLD 193 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGH 256 D T +I++ E +A +FL R KPI+ +G++ Sbjct: 194 FLS--RDSKTSAIMLYIEHIS----DARRFLSASRSASRNKPILVVKSGRSQ-------R 240 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A ++ G +G A++ AG+ + ++ L Sbjct: 241 AQQLLGGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|328958061|ref|YP_004375447.1| succinate--CoA ligase (ADP-forming) subunit alpha [Carnobacterium sp. 17-4] gi|328674385|gb|AEB30431.1| succinate--CoA ligase (ADP-forming) subunit alpha [Carnobacterium sp. 17-4] Length = 587 Score = 82.0 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 91/227 (40%), Gaps = 15/227 (6%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC 129 A ++I +P + A I ++++ + C ++ + + D R+K + + L+GP+C Sbjct: 115 DAPVALISIPGTHAPLEIEKALDEG-KHVFCFSDNVSIEDEKRLKLKAHEKGLLLMGPDC 173 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP-- 187 + I + ++ RKG++GI+ SGT E + G G + A+G GG Sbjct: 174 GTGIING---IPLAFTNVVRKGAIGIVGASGTGIQEVSTIIHKLGGGVTNAIGTGGRDLK 230 Query: 188 --VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 + G +D + D T+ IV++ + A + + ++ K + F+ Sbjct: 231 EEIGGITLMDGIVTLENDPDTDVIVVISKPPAPA---VREKVLALLRKITKPAVTIFLGE 287 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 K + HA + + A + + + + + Sbjct: 288 KPTYHEENLYHAYTL----EETARIAVQLLNNEAVSVEEQAIELPEV 330 >gi|317406564|gb|EFV86758.1| acetyl-CoA synthetase [Achromobacter xylosoxidans C54] Length = 339 Score = 82.0 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 90/260 (34%), Gaps = 26/260 (10%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK + + V E + +++ + AI E Sbjct: 44 PVNPK------AAEIEGLRCYPDVRSLPEAP--DVAIVLLGAQRTQQAIRELAGIGAGAA 95 Query: 99 VCITEGIPVLDMVRVKARLE----KSSSRLIGPNCPGILT----PDSCKIGIMPGSIFRK 150 + + G + + E + R++GPN G++ G + Sbjct: 96 IVLASGYSETGEEGARRQRELRDAAGAMRILGPNTIGLVNLTDRITLSASGALAADQLVG 155 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G +G++S+SG + + + + G+G S + + + D + D AT I Sbjct: 156 GGIGLVSQSGGILGALLSRATARGIGFSKLISTSNE--VDLDLADFIGALADDPATRVIA 213 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + E A K KPIV F G++ A A +G GA+ Sbjct: 214 LYVETIRHPAAFRAAARKAIRAG---KPIVAFKIGRSDSGA----QAAASHTGALAGADA 266 Query: 271 KINA-MKEAGICIAPSPARI 289 +A +EAGI A + + + Sbjct: 267 MYDALFEEAGIIRAQAFSDL 286 >gi|296390624|ref|ZP_06880099.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa PAb1] Length = 687 Score = 82.0 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 42/282 (14%), Positives = 89/282 (31%), Gaps = 26/282 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 + G + + + ++P + +P F +VAE + + +++ Sbjct: 9 TRIGGRPIAYMLRHGYAGQILPVNPNRA------EIQGLPAFASVAELPQAP--DVAIVA 60 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR------VKARLEKSSSRLIGPNCPG 131 VP + + + + G + V A + RL+GPN G Sbjct: 61 VPAPQVLETVRALGRQGARSAIVFSSGFSEVGEAGAAMQDAVVAAAREHGMRLLGPNALG 120 Query: 132 ILTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + S+ R G VGI ++SG + Q LG V G + Sbjct: 121 AFNSNLGYYAFFSTSLERGVPLPGRVGIATQSGAYGAHLLGMARQRRLGTPICVATGNEA 180 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 D + + + ++ E + + A KP++ G++ Sbjct: 181 --DVTLGDSIGWLVESPEIDVVMAYAESIRNVDSFLAALEAAHRAG---KPVILHKVGRS 235 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 A R A ++G + ++ + + A + + Sbjct: 236 ALGSRAALSHTASLAGDDKVLDAVLD---DYAVIRARTTEEL 274 >gi|226939907|ref|YP_002794980.1| membrane protein FdrA [Laribacter hongkongensis HLHK9] gi|226714833|gb|ACO73971.1| FdrA [Laribacter hongkongensis HLHK9] Length = 555 Score = 82.0 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 105/259 (40%), Gaps = 20/259 (7%) Query: 47 TYWTGGNVNVPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI 105 G ++ P + A + AN ++I + + A + + +++A ++ ++ + Sbjct: 93 QSRKSGGLSFPTVRSWRRACQMLPEANLTLISIAGAYAFEPAMAALKAGQH-VMLFSDNV 151 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 + + +K ++GP+C + + ++ KG VG++ SGT E Sbjct: 152 SLEQELALKQYGRDQRLLVMGPDCGTTIVSGAPLA---FSNVVAKGPVGVVGASGTGIQE 208 Query: 166 AVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 Q ++ G G + A+G+GG + G + LE+ AD A + + V + ++ + Sbjct: 209 ITTQLARLGSGITHAIGLGGRDLSETIGGLSALTALEMMAADPACKIVAFVSKPPAASVK 268 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI- 280 A+ ++ G KP+V G+ G V ++ A + A I Sbjct: 269 --ARIIEAMQALG--KPVVALFLGEVP----ARRRVGNVHLAYTLDEAARMAA-ELANIE 319 Query: 281 -CIAPSPARIGRSLVELLG 298 +A P+ G+ L L Sbjct: 320 LQMADLPSVAGKKLSGLYS 338 >gi|218780435|ref|YP_002431753.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218761819|gb|ACL04285.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 695 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 86/271 (31%), Gaps = 24/271 (8%) Query: 26 EQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGD 85 E + + + G++ + Y G V +F + E S+I P D Sbjct: 28 ENMLRWGYRGQIFGVNGRNNDAYVDG----VKMFREIDELPIIPDIVYSLI--PAKLVPD 81 Query: 86 AIIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRLIGPNCPGILTPDSCK 139 + + + + + G + K R +GPN + + Sbjct: 82 MVERCGKMGVKRMAIPSGGFSEFGGRGDDLAQQTLDAARKYGIRFVGPNGLTLANVKNGL 141 Query: 140 -IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 + P G++ ++S+SG + + E LG + IG + +D LE Sbjct: 142 CLPFAPVVKPPLGNISVVSQSGGVGLMIMTHFKAENLGMAKFASIGNK--LDLDEVDFLE 199 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 F D TE I M E E A E KP+V F + T R Sbjct: 200 YFGQDPDTEIIFMYLESIIRGRELA------EMASRINKPVVVFKSNTTDSGKRAAMSHT 253 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARI 289 A +S + K++GI Sbjct: 254 ASVSSDDHILD---AICKDSGIIRIRHFHDF 281 >gi|238784489|ref|ZP_04628498.1| hypothetical protein yberc0001_13440 [Yersinia bercovieri ATCC 43970] gi|238714658|gb|EEQ06661.1| hypothetical protein yberc0001_13440 [Yersinia bercovieri ATCC 43970] Length = 880 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 96/281 (34%), Gaps = 29/281 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHP-KKG--STYWTGGNVNVPVFTTVAEAKERTAANASV 75 +AG + + V + P K ++P+ + ++ Sbjct: 26 RAGFLMMRNLLDGGFSGPVLPVTPTHKAVCGVLAYADIASLPI-----------TPDLAI 74 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + + + ++ ++ +KA + RL+GPN G+L P Sbjct: 75 LCTHDRRNLTLLEDLGVRGCKAVIILSA--ATEQFAELKACAHRHHMRLLGPNSLGLLAP 132 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 +KG + +S+S + + Q +G S + +G + + Sbjct: 133 WQGLNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIALGDSLDIDVDDL- 191 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 L+ D T +I++ E +A +FL R KPI+ +G++ Sbjct: 192 -LDFLARDGKTSAIMLYIEHIS----DARRFLSASRSASRNKPILVVKSGRSQ------- 239 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A +++G +G A++ AG+ + ++ L Sbjct: 240 RAQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|319764846|ref|YP_004128783.1| CoA-binding domain protein [Alicycliphilus denitrificans BC] gi|317119407|gb|ADV01896.1| CoA-binding domain protein [Alicycliphilus denitrificans BC] Length = 695 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 89/273 (32%), Gaps = 23/273 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P + G+ + + ++A E + +VI + A+ E + Sbjct: 39 YRGTVYPINPAREEIQGHRS---YASLAALPEVP--DLAVIALGGDKTVAAVEECAARGV 93 Query: 96 PLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIG----IMPG 145 V I G + AR + RL GPN G+ + I + Sbjct: 94 KGAVVIASGFGETGPAGRELQDHMVARARAAGMRLYGPNTQGLANFGTGAIAGFSTMFIE 153 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 G VGI+S+SG ++ A GLG G + ++ D Sbjct: 154 VPPMDGPVGIVSQSGGMSSVAYGLVRGRGLGVRHVHATGNEA--DVTVAEMAWAVAHDPG 211 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK 265 + +++ E E AA R R PIV AG+TA + ++ Sbjct: 212 VKLLLLYLESIAQPEMLAA---TAAYARERDLPIVAVKAGRTAGGQKAASSHTGALANED 268 Query: 266 GGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + ++ GI P R+ L Sbjct: 269 RTVD---AFLRHHGIWRVRDPHEQARAAHAYLK 298 >gi|225388424|ref|ZP_03758148.1| hypothetical protein CLOSTASPAR_02160 [Clostridium asparagiforme DSM 15981] gi|225045505|gb|EEG55751.1| hypothetical protein CLOSTASPAR_02160 [Clostridium asparagiforme DSM 15981] Length = 515 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 12/195 (6%) Query: 59 FTTVAEAKERTAA-NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 + T+ A + A N +VI VP A ++ + + ++ ++ + + + +K Sbjct: 103 YKTIRHAVKDNRAANVAVISVPGRYAAREAKIALNSGLH-VMMFSDNVSIEEERALKELA 161 Query: 118 EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 ++GP+C + + G+ + R+G++G++ SGT E + Q + G G Sbjct: 162 VSKGLLMMGPDCGTAVINHT---GLCFANQVRRGNIGVVGASGTGLQEVIVQIDRLGGGI 218 Query: 178 STAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 + A+G GG + G + + + TE IV+V + E+ A + + Sbjct: 219 TQALGTGGRDLSREIGGLMMLHGIRALAKEPDTEIIVLVSKP---PEQSVADKIFELLNT 275 Query: 234 GRKKPIVGFVAGKTA 248 K +V F+ G TA Sbjct: 276 LEKPVVVCFLEGDTA 290 >gi|213419318|ref|ZP_03352384.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 89 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 50/93 (53%), Positives = 68/93 (73%), Gaps = 4/93 (4%) Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK 265 TE+IVM+GEIGGSAEEEAA ++KD KP+VG++AG TAP G+ MGHAGA+I+GGK Sbjct: 1 TEAIVMIGEIGGSAEEEAAAYIKDHV----TKPVVGYIAGVTAPKGKRMGHAGAIIAGGK 56 Query: 266 GGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 G A++K A++ AG+ S A IG +L ++ Sbjct: 57 GTADEKFAALEAAGVKTVRSLADIGEALKAIIK 89 >gi|320352383|ref|YP_004193722.1| ATP-grasp domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320120885|gb|ADW16431.1| ATP-grasp domain protein [Desulfobulbus propionicus DSM 2032] Length = 705 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 94/271 (34%), Gaps = 24/271 (8%) Query: 26 EQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGD 85 + + + + G++P T G + V + AE A +V+ +P Sbjct: 28 DNCLRWGYRGRIFGVNPATDETDVGG----IRVVRSAAELP--VAPELAVVLIPARYVPA 81 Query: 86 AIIESIEAEIPLIVCITEGIPVLDM------VRVKARLEKSSSRLIGPNCPGILTPDSCK 139 A+ + A I + + G +++ + R +GPN + S Sbjct: 82 AVEDCGRAGITRLAVQSGGFNESSEGGMALAAQLRDAARRHGIRFVGPNGLTLADTASGL 141 Query: 140 -IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 + +P R G+ ++++SG L E +G + IG + DVLE Sbjct: 142 CLPFVPSFPVRHGTFSLITQSGGLGLFLWNLLESEQVGLAKFASIGNK--LDLDECDVLE 199 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D +T I + E G+ + ++ A+ KP++ + A T R Sbjct: 200 YLATDPSTRVIGLYLEQIGNG----CRLVELAARI--DKPVILYKANTTEAGSRAAMSHT 253 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARI 289 A ++ + + A AGI Sbjct: 254 ASLAHDEAIIDT---ACARAGIIRIHHLHDF 281 >gi|271963526|ref|YP_003337722.1| CoA-binding domain-containing protein [Streptosporangium roseum DSM 43021] gi|270506701|gb|ACZ84979.1| CoA-binding domain protein [Streptosporangium roseum DSM 43021] Length = 711 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 53/236 (22%), Positives = 93/236 (39%), Gaps = 26/236 (11%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----M 110 VP T+A+A A+ +++ VP + + ++ IP + ++ G Sbjct: 290 GVPAVPTLADA----DADYALVAVPAGRCAEVVRQA--DGIPFVQVMSGGFGEAGAPELE 343 Query: 111 VRVKARLEKSSSRLIGPNCPGILTP--DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + ++ +RL+GPNC G+ +P IG PG G V ++S+SG L E V Sbjct: 344 AGLVRAAREAGTRLLGPNCMGVYSPRGGQTFIGGEPGP---PGHVALISQSGGLAGEVVR 400 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + GL S +G ++L DE T + M E + Sbjct: 401 VGERRGLAFSRVATVGNSA--DVTPAELLRWLATDEHTSVVGMYLEDP----RGGRALFE 454 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM-KEAGICIA 283 + P+V V G++A A A +GG G + A+ +++G + Sbjct: 455 ALMSVRGRLPVVLLVGGRSA----QGRRAAASHTGGMVGDDRVWRALAEQSGAALV 506 >gi|224372805|ref|YP_002607177.1| CoA binding domain protein [Nautilia profundicola AmH] gi|223589267|gb|ACM93003.1| CoA binding domain protein [Nautilia profundicola AmH] Length = 634 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 88/226 (38%), Gaps = 17/226 (7%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM----VRVKARLEKSSSRL 124 + +VI +P +++ + + + I+ G + +K ++ + + Sbjct: 276 PQVDTAVIAIPSVYVIESVKKLAKKGCKNFIIISAGFKESGNTSAELELKELAKEHNINI 335 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 IGPNC GI S GS+G++S+SG + + + S G S + +G Sbjct: 336 IGPNCLGIYNDTLKLNLTFAKSRIYSGSIGLVSQSGAVLTALLDKASHYKTGFSHIISMG 395 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + F + + ++I + E + +FLK R +KP++ F + Sbjct: 396 N--MADFNFAHAVNELNRQKNCKTISIYAE----GLQFGKEFLKA--IRNLQKPVLLFKS 447 Query: 245 GKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 GK+ + H G + G E I+ K AG I S + Sbjct: 448 GKSKEAKKAAFSHTGNIA----GNYEMIISLSKSAGAVIKDSIESL 489 >gi|166032664|ref|ZP_02235493.1| hypothetical protein DORFOR_02379 [Dorea formicigenerans ATCC 27755] gi|166027021|gb|EDR45778.1| hypothetical protein DORFOR_02379 [Dorea formicigenerans ATCC 27755] Length = 1003 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 85/208 (40%), Gaps = 13/208 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 A K+ + AN +VI +P + A +++ + + ++ + + D +K + Sbjct: 108 AALKKMSNANLAVISIPGAYAALEADRALDEGLS-VFMFSDNVTIEDEKALKEKAHSKGL 166 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + I + KGS+GI+ SGT E + G G + A+G Sbjct: 167 AVMGPDCGTGIIQG---VPIAFTNNVAKGSIGIIGASGTGIQELTTIIDRLGEGVTNAIG 223 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 IGG V G +D+++ D+ + +V+V + +E + KP Sbjct: 224 IGGRDLKAEVGGITMMDMIDAMEDDDTVKVLVIVSKPPA---KEVRDKI-SARLSNFSKP 279 Query: 239 IVGFVAGKTAP-PGRTMGHAGAVISGGK 265 +V G+ HA + + Sbjct: 280 VVTLFVGEKPEYHEENFYHAYTLDEAAR 307 >gi|86741637|ref|YP_482037.1| CoA-binding [Frankia sp. CcI3] gi|86568499|gb|ABD12308.1| CoA-binding [Frankia sp. CcI3] Length = 707 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 90/267 (33%), Gaps = 37/267 (13%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 ++ G ++P + V+ + V+ VP + + E Sbjct: 43 SEFTGSVYPVNAAATHVAS-----VYAYRDLRDVPVEIDLVVVAVPAPRVAEVMRACAEK 97 Query: 94 EIPLIVCITEGIP------VLDMVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPG 145 + ++ + G + V RLIGPN G++ P Sbjct: 98 GVRGVIVVAAGFADGGDEGRARLADVIRIARDGGMRLIGPNAMGVINTVPTVRLHATFAV 157 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 G VG+ ++SG L + S+ LG ST V IG D+L + +D Sbjct: 158 GDPPPGRVGLFTQSGALAGTFLTDASRRALGISTFVSIGDR--SDVSCNDLLRYWRSDPR 215 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK 265 T +++ + G+ +F + + R KP+V +G+ A GA+ Sbjct: 216 TGVVMLHLQSLGNP----RRFARIARELSRHKPVVALKSGREA----AHSDIGAL----- 262 Query: 266 GGAEDKINAMKEAGICIAPSPARIGRS 292 AG+ + +++ + Sbjct: 263 ---------FSSAGVIRVDTLSQLFDT 280 >gi|118580012|ref|YP_901262.1| CoA-binding domain-containing protein [Pelobacter propionicus DSM 2379] gi|118502722|gb|ABK99204.1| CoA-binding domain protein [Pelobacter propionicus DSM 2379] Length = 451 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 81/217 (37%), Gaps = 20/217 (9%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEKSSSRLI 125 + S+I P + I+ ++ + ++ G + +K ++ RLI Sbjct: 65 PVDLSIIMRPAAEVP-GILHQHAGKVRFALIVSAGFAEVGAWELQEEIKHIGREAGIRLI 123 Query: 126 GPNCPGILTPDSCKIGIMPGS----IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 GPNC G+ P + KG+V I+S+SG L + Q +G S + Sbjct: 124 GPNCLGVYNPRHGLDTMFLPHALLKKPGKGNVAIVSQSGALVVCLLEAVRQANMGVSKVI 183 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G + DV E D T ++ E G+ +F++ KP++ Sbjct: 184 NYGNA--VDLDAADVYEYLAEDRETRVVISYLESVGNG----RRFIEAARNLDNTKPLLV 237 Query: 242 FVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKE 277 AGK A + H G + G E + +++ Sbjct: 238 LKAGKGAGGQKAACSHTGRLA----GSYEVFRSILRQ 270 >gi|238752951|ref|ZP_04614412.1| hypothetical protein yrohd0001_3050 [Yersinia rohdei ATCC 43380] gi|238708812|gb|EEQ01069.1| hypothetical protein yrohd0001_3050 [Yersinia rohdei ATCC 43380] Length = 880 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 96/278 (34%), Gaps = 23/278 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +AG + + + P V + T+A + +++ Sbjct: 26 RAGFLMMRNLLDGGFNGPILPVTPS------HKAVCGVLAYATIASLP--ITPDLAILCT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 + + ++ ++ + +KA ++ RL+GPN G+L P Sbjct: 78 HDQRNLSLLEDLGARGCKAVIILSA--ATEQLAELKACAQRHHMRLLGPNSLGLLAPWQG 135 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 +KG + +S+S + + Q +G S + +G + + L+ Sbjct: 136 LNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIALGDSLDIDVDDL--LD 193 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E +A +FL R KP++ +G++ A Sbjct: 194 FLARDGKTSAIMLYIEHLS----DARRFLSASRSASRNKPVLVVKSGRSQ-------RAQ 242 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +++ +G A++ AG+ + ++ L Sbjct: 243 QLLNAQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|296139547|ref|YP_003646790.1| CoA-binding protein [Tsukamurella paurometabola DSM 20162] gi|296027681|gb|ADG78451.1| CoA-binding domain protein [Tsukamurella paurometabola DSM 20162] Length = 903 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 109/292 (37%), Gaps = 40/292 (13%) Query: 9 TKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T + V G + GK G I V +HP++ + + +V + Sbjct: 229 TSIAVIGASATPGKVGHAVLRNIIAGDFAGPVYPVHPERR------SVAGIRAYESVRDI 282 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEK 119 +R + +V+ VP G + + + E+ ++ ++ G R+ + Sbjct: 283 PDR--VDLAVVAVPADNMGQVLDDCLAKEVRTLLVVSSGFSDAGGRGKESERRLLKAVRS 340 Query: 120 SSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQ 177 RLIGPN G++ D + + +G+VG +SG L + ++ G+G Sbjct: 341 HGMRLIGPNALGVVNTDREVRLNATLAPVVPGRGNVGFFCQSGALGIAILDTAAKRGVGL 400 Query: 178 STAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK 237 +T V G DVL+ + D+ TE +++ E G+ + + R+K Sbjct: 401 TTFVSAGNRA--DVSGNDVLQYWDTDDDTEVVLLYLESFGNPRKFGR----IARRLARQK 454 Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 PIV H G V + + D + + +G+ S + Sbjct: 455 PIVAV-------------HRGGVDADRRQRGSDAL--FENSGVVQVDSIPEL 491 >gi|168333420|ref|ZP_02691693.1| probable acetyl-CoA synthetase [Epulopiscium sp. 'N.t. morphotype B'] Length = 467 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 96/273 (35%), Gaps = 23/273 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 K G E + + ++P+ + + TV + + I Sbjct: 33 TKVGYKVIEALNTWGYRGKIYPVNPR------ATKVFGLMAYPTVKDIPNE--IDLVFIA 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK----ARLEKSSSRLIGPNCPGIL 133 P + + + + ++V T + ++ + LIGPN G+ Sbjct: 85 TPAHIVKSVLEDCVAKGVKIVVIATSAFKEIGRGDLQDKLTQYCRDNQLPLIGPNLIGLG 144 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 +P + KG+V ++S+SG ++ + ++ G S VG+G +F Sbjct: 145 SPYLNFNCGFIPYLPVKGAVAMISQSGANLLASLGASQKDRFGISFFVGLGNKA--DVDF 202 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 + +E D T+ I + E E F+K + KPIV AG +A + Sbjct: 203 CEFIEYANRDAHTKCISLYIEGIDCPE----AFIKTC--QNATKPIVAIKAGGSAIGKKA 256 Query: 254 MGHAGAVISGGKGGAEDKINA-MKEAGICIAPS 285 A S + + +A KEA + + Sbjct: 257 AFAHTA--SENLQTSNEYYDALFKEAKVIRVAT 287 >gi|332286695|ref|YP_004418606.1| putative pimeloyl-CoA synthetase [Pusillimonas sp. T7-7] gi|330430648|gb|AEC21982.1| putative pimeloyl-CoA synthetase [Pusillimonas sp. T7-7] Length = 707 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 91/274 (33%), Gaps = 26/274 (9%) Query: 26 EQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGD 85 + T + ++P + + G +++++ + + ++I Sbjct: 46 AYMLARGYTGKIHAVNPAR--QFVQGQAS----YSSLSAIGQ--PIDLAIIGTAAERVEA 97 Query: 86 AIIESIEAEIPLIVCITEGIPVL------DMVRVKARLEKSSSRLIGPNCPGILTPDSCK 139 ++E I + V + G + R++A ++GPN G+ + Sbjct: 98 IVLEGIAIGVKAFVIFSSGFAEMGEQGRAMQERLQALACIHDVAIVGPNSLGVANSRNGL 157 Query: 140 IGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 I + +GS S+SG L + + GLG S + G + + Sbjct: 158 IASFTTALENTPILQGSFSFASQSGALGAYWLDIALRSGLGFSQWITTGNE--CNVDIAQ 215 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 L + D T I + E E + L+ A G KP++ +G++A Sbjct: 216 ALHHLVDDAHTRVIGLYIEDIRRP-LEFRKALERAAAAG--KPVIAIKSGRSAAGQIAAA 272 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 ++G + + + G S + Sbjct: 273 SHTGALAGNDTLYD---ACLTQFGAIRVDSLTEM 303 >gi|163857595|ref|YP_001631893.1| putative Acetyl-CoA synthetase [Bordetella petrii DSM 12804] gi|163261323|emb|CAP43625.1| putative Acetyl-CoA synthetase [Bordetella petrii] Length = 695 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 90/270 (33%), Gaps = 27/270 (10%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P G P +V + + +V+ + + + + Sbjct: 39 YAGHVYPVNPKYQEVFGLRCWPDIESVPQ-----PVDLAVLAIGAAEVTPMLKRCHAHGV 93 Query: 96 PLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCKIGIMPG---- 145 + G ++ A +S + GPNC G ++ Sbjct: 94 RAAIVYAAGFAEAGGDGLRLQHELEAFAAESGMLVAGPNCMGFANLNTQAHTAFASVFKT 153 Query: 146 --SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLAD 203 G V +L++SG + +EGL S + G + +F LE D Sbjct: 154 APMQQGPGQVSLLTQSGNVCAAVYALARREGLPFSQFINTGNEACI--DFSAYLEYLAQD 211 Query: 204 EATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK-KPIVGFVAGKTAPPGRTMGHAGAVIS 262 TE ++ E + +F++ + R+ K ++ AG T + + + ++ Sbjct: 212 PHTEIVLGYLEQL----RDGPRFVRACRELQRRGKLLIALKAGATDKGAQAVRSHTSALA 267 Query: 263 GGKGGAEDKINAMKEAGICIAPSPARIGRS 292 G + A ++ G+ A A++ + Sbjct: 268 GDRRIYS---AAFRQLGVIEAHDFAQMAQL 294 >gi|261492490|ref|ZP_05989044.1| hypothetical protein COK_0913 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496924|ref|ZP_05993292.1| hypothetical protein COI_2636 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307448|gb|EEY08783.1| hypothetical protein COI_2636 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311853|gb|EEY13002.1| hypothetical protein COK_0913 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 999 Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 78/201 (38%), Gaps = 11/201 (5%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPN 128 AN +VI +P + A +++ + + ++ + V D +K + + ++GP+ Sbjct: 114 PGANLAVISIPGAYAALEANRALDEGLN-VFMFSDNVSVEDEKALKEKAHRKGLVVMGPD 172 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD-- 186 C + + I + GS+GI+ SGT E + G G A+G GG Sbjct: 173 CGTGIIQG---VPIAFTNSVTPGSIGIIGASGTGIQELTTIIDRLGEGVENAIGTGGRDL 229 Query: 187 --PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + G +D +E ++ + ++++ + A + + R K I F+ Sbjct: 230 YEDIGGITMLDAIEAMEQNDKVKVLIVISKPPAKA---VREKISARLSRYSKPVITLFLG 286 Query: 245 GKTAPPGRTMGHAGAVISGGK 265 K HA + + Sbjct: 287 EKPTFHEENFYHAYTLDEAAR 307 >gi|256371981|ref|YP_003109805.1| GCN5-related N-acetyltransferase [Acidimicrobium ferrooxidans DSM 10331] gi|256008565|gb|ACU54132.1| GCN5-related N-acetyltransferase [Acidimicrobium ferrooxidans DSM 10331] Length = 867 Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 85/232 (36%), Gaps = 19/232 (8%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI----PV--LDMVRVKARLEKSSSR 123 + +++ V + ++ AE+ +V +T G P + R+ A + R Sbjct: 262 PIDLAIVAVRAEELPLVLEDAHAAEVRALVVVTAGFSDIGPEGAEEERRLVASARRLGMR 321 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 ++GPN G+ +P G + G + ++SG L+ V + +Q +G ++ V Sbjct: 322 VVGPNSMGVASPAIGLAGTLAPFALEAGGTSVHAQSGPLSLAIVAKLAQASIGIASFVSS 381 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G D+L + DE T IV+ E G+ A + KPI+ Sbjct: 382 GNKADISGN--DLLAWWETDERTRCIVLYIEDFGNPRTFAR----VARRVSATKPILVVK 435 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARIGRSLV 294 P R G E I+A ++ G+ + + + Sbjct: 436 ------PEREGRSRVEPDRPGVLDTEVAIDALLERTGVLRTQTLEELTELVR 481 >gi|54025747|ref|YP_119989.1| hypothetical protein nfa37770 [Nocardia farcinica IFM 10152] gi|54017255|dbj|BAD58625.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 894 Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 53/285 (18%), Positives = 99/285 (34%), Gaps = 29/285 (10%) Query: 13 VQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAAN 72 V G T G G + P + + V + TV E + + Sbjct: 221 VIGATPGTGRVGGAVLANLLSGVFQGPVFPVNPNRRFV---RGVRAYATVREIPDE--VD 275 Query: 73 ASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIG 126 +V+ VP + + + + + +V +T G + A R++G Sbjct: 276 LAVVAVPAAAIDSVLDDCMAKGVKGLVVLTAGFGETGPEGMAAERELVAAARGHGMRVVG 335 Query: 127 PNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 P+ GI P+ + + +G +G +SG L + + + LG ST V G Sbjct: 336 PSALGIANTDPEVAMNATLAPVLPPRGRIGFFCQSGPLGAAILGEAAARNLGLSTFVSAG 395 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 D+L+ + D AT+ +++ E G+ +F + + R KPIV + Sbjct: 396 NRA--DVSGNDLLQYWDTDAATDLVLLYLESFGNP----RKFSRIARRVARTKPIVAVSS 449 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G+ + G + +AGI S + + Sbjct: 450 GR----------SVRTRPGADMDRSIVRDLFAQAGIVQVDSISEL 484 >gi|116048945|ref|YP_792253.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|115584166|gb|ABJ10181.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa UCBPP-PA14] Length = 715 Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 91/284 (32%), Gaps = 30/284 (10%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 + G + + + ++P + +P F +VAE + + +++ Sbjct: 37 TRIGGRPIAYMLRHGYAGQILPVNPNRA------EIQGLPAFASVAELPQAP--DVAIVA 88 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR------VKARLEKSSSRLIGPNCPG 131 VP + + + + G + V A + RL+GPN G Sbjct: 89 VPAPQVLETVRALGRQGARSAIVFSSGFSEVGEAGAAMQDAVVAAAREHGMRLLGPNALG 148 Query: 132 ILTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + S+ R G VGI ++SG + Q LG V G + Sbjct: 149 AFNSNLGYYAFFSTSLERGVPLPGRVGIATQSGAYGAHLLGMARQRRLGTPICVATGNEA 208 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 D + + + ++ E + + A KP++ G++ Sbjct: 209 --DVTLGDSIGWLVESPEIDVVMAYAESIRNVDSFLAALEAAHRAG---KPVILHKVGRS 263 Query: 248 APPGRTMGHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARI 289 A R A ++G +DK+ + + + A + + Sbjct: 264 ALGSRAALSHTASLAG-----DDKVLDAVLGDYAVIRARTTEEL 302 >gi|330862876|emb|CBX73014.1| uncharacterized protein yfiQ [Yersinia enterocolitica W22703] Length = 805 Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 96/281 (34%), Gaps = 29/281 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHP-KKG--STYWTGGNVNVPVFTTVAEAKERTAANASV 75 +AG + + + P K ++P+ + ++ Sbjct: 26 RAGFLMMRNLLDGGFNGPILPVTPIHKAVSGVLAYANIASLPI-----------TPDLAI 74 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + + + ++ ++ + KA ++ RL+GPN G+L P Sbjct: 75 LCTHDRRNLTLLEDLGTRGCKAVIILSAATEQFPEL--KACAQRHHMRLLGPNSLGLLAP 132 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 +KG + +S+S + + Q +G S + +G + + Sbjct: 133 WQGLNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIALGDSLDIDVDDL- 191 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 L+ D T +I++ E +A +FL R KPI+ +G++ Sbjct: 192 -LDFLARDGKTSAIMLYIEHIS----DARRFLSASRSASRNKPILVVKSGRSQ------- 239 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A +++G +G A++ AG+ + ++ L Sbjct: 240 RAQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|15596214|ref|NP_249708.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa PAO1] gi|9946928|gb|AAG04406.1|AE004534_4 pimeloyl-CoA synthetase [Pseudomonas aeruginosa PAO1] Length = 715 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 91/284 (32%), Gaps = 30/284 (10%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 + G + + + ++P + +P F +VAE + + +++ Sbjct: 37 TRIGGRPIAYMLRHGYAGQILPVNPNRA------EIQGLPAFASVAELPQAP--DVAIVA 88 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR------VKARLEKSSSRLIGPNCPG 131 VP + + + + G + V A + RL+GPN G Sbjct: 89 VPAPQVLETVRALGRQGARSAIVFSSGFSEVGEAGAAMQDAVVAAAREHGMRLLGPNALG 148 Query: 132 ILTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + S+ R G VGI ++SG + Q LG V G + Sbjct: 149 AFNSNLGYYAFFSTSLERGVPLPGRVGIATQSGAYGAHLLGMARQRRLGTPICVATGNEA 208 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 D + + + ++ E + + A KP++ G++ Sbjct: 209 --DVTLGDSIGWLVESPEIDVVMAYAESIRNVDSFLAALEAAHRAG---KPVILHKVGRS 263 Query: 248 APPGRTMGHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARI 289 A R A ++G +DK+ + + + A + + Sbjct: 264 ALGSRAALSHTASLAG-----DDKVLDAVLGDYAVIRARTTEEL 302 >gi|313105961|ref|ZP_07792223.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa 39016] gi|310878725|gb|EFQ37319.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa 39016] Length = 715 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 91/284 (32%), Gaps = 30/284 (10%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 + G + + + ++P + +P F +VAE + + +++ Sbjct: 37 TRIGGRPIAYMLRHGYAGQILPVNPNRA------EIQGLPAFASVAELPQAP--DVAIVA 88 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR------VKARLEKSSSRLIGPNCPG 131 VP + + + + G + V A + RL+GPN G Sbjct: 89 VPAPQVLETVRALGRQGARSAIVFSSGFSEVGEAGAAMQDAVVAAAREHGMRLLGPNALG 148 Query: 132 ILTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + S+ R G VGI ++SG + Q LG V G + Sbjct: 149 AFNSNLGYYAFFSTSLERGVPLPGRVGIATQSGAYGAHLLGMARQRRLGTPICVATGNEA 208 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 D + + + ++ E + + A KP++ G++ Sbjct: 209 --DVTLGDSIGWLVESPEIDVVMAYAESIRNVDSFLAALEAAHRAG---KPVILHKVGRS 263 Query: 248 APPGRTMGHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARI 289 A R A ++G +DK+ + + + A + + Sbjct: 264 ALGSRAALSHTASLAG-----DDKVLDAVLGDYAVIRARTTEEL 302 >gi|160939883|ref|ZP_02087230.1| hypothetical protein CLOBOL_04774 [Clostridium bolteae ATCC BAA-613] gi|158437317|gb|EDP15082.1| hypothetical protein CLOBOL_04774 [Clostridium bolteae ATCC BAA-613] Length = 1002 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 81/201 (40%), Gaps = 13/201 (6%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC 129 AN +VI +P + A +++ + + ++ + + D +++K + + ++GP+C Sbjct: 115 DANLAVISIPGAYAALEADRALDEGMN-VFMFSDNVTLEDEIKLKKKAHEKGLAVMGPDC 173 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP-- 187 + + I + G +GI+ SGT E + G G A+G GG Sbjct: 174 GTGIIQG---VPIAFTNHVAPGPIGIIGASGTGIQELTTIIDRLGEGVKNAIGTGGRDLS 230 Query: 188 --VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 V G +D++E D+ + ++++ + A + + KKP+V G Sbjct: 231 TEVGGITMMDMIEAMEKDDTVKVLIIISKPPAKAVRDRI----SDRLSNFKKPVVTLFLG 286 Query: 246 KTAP-PGRTMGHAGAVISGGK 265 + HA + + Sbjct: 287 EKPEYHEENFYHAYTLDEAAR 307 >gi|290973168|ref|XP_002669321.1| GCN5-related N-acetyltransferase [Naegleria gruberi] gi|284082867|gb|EFC36577.1| GCN5-related N-acetyltransferase [Naegleria gruberi] Length = 1100 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 55/288 (19%), Positives = 105/288 (36%), Gaps = 54/288 (18%) Query: 46 STYWTGGNVNVPVFTTVAEA-------KERTAANASVIYVPP-SGAGDAIIESIEAEIPL 97 T + VP++ +++E +++ + +VI A+ E I+ + Sbjct: 164 KTKRRPHLLGVPMYPSLSELSASKSTEQKKLEIDLAVICCHQVETMFYALEECIKNGVKG 223 Query: 98 IVCIT-------EGIPVLDMVR---VKARLEKSSSRLIGPN----CPGILTPDSCKIG-- 141 V I E + K ++ S R+IGP P + +G Sbjct: 224 CVIIGSVYSKFYEKFSENETKNIEKFKEIVKGSDIRVIGPGMGLITPLVTQSGQYHVGEI 283 Query: 142 ------IMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 I P S +G +G++S+SG L + + ++G+G S +G + Sbjct: 284 YNNFLNITPTNRSSELTRGKIGVVSQSGALATTILDWSLKQGVGLSGFACVGANQ-TDVN 342 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 F D++E F D T +I++ E G+ E +F KKPI+ Sbjct: 343 FADMVEHFGNDPNTHAILLYIEDLGNNE-HIKRFASAARSVALKKPIIAMK--------- 392 Query: 253 TMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARIGRSLVELLGS 299 ++ ++ +NA + GI S + + +L+G Sbjct: 393 --------MNTNNRDEDNYLNALFERVGILRVNSIEEM-FYMSQLIGK 431 >gi|217970133|ref|YP_002355367.1| CoA-binding protein [Thauera sp. MZ1T] gi|217507460|gb|ACK54471.1| CoA-binding domain protein [Thauera sp. MZ1T] Length = 901 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 104/305 (34%), Gaps = 25/305 (8%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 L + + + V G + + Q G I P G + P ++A Sbjct: 9 LFNPRS-IAVIGASARERRMGNVLMRNLLSGQFAGPIMPVNPRRTSVAGVLTYP---SIA 64 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE---------GIPVLDMVRVK 114 + + ++I P + E E ++ + G P+ + Sbjct: 65 ALPQ--TPDLAIICTPAPLVPRLVEELGERGARAVMVMANQLDTTLGADGRPIERSILEI 122 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + RL+G GIL P R G +G +S+ T+ + ++ Sbjct: 123 T--RRYEMRLLGGGTLGILVPGLGLNATFSQIAARPGKLGFVSQRDTVGTMVLDWALRKK 180 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 +G S V +G G F +VL+ AD T +I++ E + ++ F+ Sbjct: 181 VGFSHFVSLGDSLDIG--FGEVLDFLAADSGTRAILLYIE----SIQDRRAFMSAARAAA 234 Query: 235 RKKPIVGFVAGKTAP-PGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRS 292 R KP++ AG++ P + + +D A++ AGI + + Sbjct: 235 RNKPVIAIKAGRSPDNPLMGVSDPLFLEMPNLVSHDDVHDAALRRAGILRVDQLEEMFGA 294 Query: 293 LVELL 297 +L Sbjct: 295 AETVL 299 >gi|116695380|ref|YP_840956.1| 6-carboxyhexanoate-CoA ligase [Ralstonia eutropha H16] gi|113529879|emb|CAJ96226.1| 6-Carboxyhexanoate-CoA ligase [Ralstonia eutropha H16] Length = 700 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 94/261 (36%), Gaps = 23/261 (8%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPL 97 G I+P +P + +A E + ++ + A A+ + Sbjct: 40 GAIYPVNPKVE---SIDGLPCYPDIASLPEVP--DVGIVLLGAERAHLAVRDLAARGAGA 94 Query: 98 IVCITEGIPVLDMVRVKARLE----KSSSRLIGPNCPGILT----PDSCKIGIMPGSIFR 149 + + G + + E S RL+GPN G++ G + F Sbjct: 95 AIVLASGYTETGAEGARRQAELIEAAGSMRLLGPNTIGLVNLTDNIPLSASGALEMDQFP 154 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 GS+G++S+SG + + + + G+G S V + + D ++ DEAT I Sbjct: 155 AGSIGVVSQSGGILGALLSRAAARGIGLSKLVSTSNE--VDLDLADFIDYLADDEATRVI 212 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGA 268 + E + E LK KP+V F G++ R H GA+ G Sbjct: 213 ALYVESVRNPETFRRAALKAARAG---KPVVAFKIGRSESGARAAVSHTGALA----GTD 265 Query: 269 EDKINAMKEAGICIAPSPARI 289 ++ G+ A + + + Sbjct: 266 RMYDALFEQVGVIRAQTFSDL 286 >gi|239917819|ref|YP_002957377.1| acyl-CoA synthetase (NDP forming) [Micrococcus luteus NCTC 2665] gi|281413688|ref|ZP_06245430.1| acyl-CoA synthetase (NDP forming) [Micrococcus luteus NCTC 2665] gi|239839026|gb|ACS30823.1| acyl-CoA synthetase (NDP forming) [Micrococcus luteus NCTC 2665] Length = 909 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 87/227 (38%), Gaps = 24/227 (10%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP------VLDMVRVKARLEKSSSR 123 + V+ VP I E+ A +V +T G + R+ + R Sbjct: 261 PVDLVVVAVPADEVEALIPEAAAAGAQGLVVLTSGYADAGAEGLEAQRRLVSLARAHGMR 320 Query: 124 LIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +IGP G++ D + ++G VG+ S+SG + + G+G ST++ Sbjct: 321 VIGPASAGLVRTDPAIRLNASPSPGLAQRGPVGLFSQSGAVGAMVSAGVKRRGVGISTSI 380 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G D ++ F AD T ++ + E G+ +F + + R KP+V Sbjct: 381 SAGNRA--DVSGNDAMQFFEADPHTAAVGVYLESFGNP----RKFSRIARRLSRTKPVVV 434 Query: 242 F---VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 V G+ PPG H +G + ++ + G+ A + Sbjct: 435 VRSDVTGRFLPPG----HETRTTQAPEGTVDSMLD---QTGVLEAHT 474 >gi|224477536|ref|YP_002635142.1| membrane protein FdrA [Staphylococcus carnosus subsp. carnosus TM300] gi|222422143|emb|CAL28957.1| putative acyl-CoA synthetase [Staphylococcus carnosus subsp. carnosus TM300] Length = 583 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 82/232 (35%), Gaps = 15/232 (6%) Query: 43 KKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCIT 102 KG + G V + + N ++I +P A ++ + + + Sbjct: 89 GKGESDKEEGQQEVSNWN--QALDKANHPNLALISIPGQYAAMEAETALRNNLH-VFMFS 145 Query: 103 EGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTL 162 + +P D VR+K ++GP+C + +I KG +GI+ SGT Sbjct: 146 DNVPKDDEVRLKEMAHDKGLLVMGPDCGTGIIHSLPLAFT---NIVNKGDIGIVGASGTG 202 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGS 218 E +EG G + A+G GG V +D ++ D + I ++ + Sbjct: 203 IQEVTTIIDREGKGVTNAIGTGGRDLSTEVGAITMMDSIKALNQDPKVKVITVISKPPAK 262 Query: 219 AEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT-MGHAGAVISGGKGGAE 269 EE L R KP+V G + HA + + + Sbjct: 263 EVEEKVLNL----LRNIDKPVVTLFLGHKPEYTEANIYHAYTLEEAARVSVQ 310 >gi|332160627|ref|YP_004297204.1| putative acetyltransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664857|gb|ADZ41501.1| putative acetyltransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 880 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 96/281 (34%), Gaps = 29/281 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHP-KKG--STYWTGGNVNVPVFTTVAEAKERTAANASV 75 +AG + + + P K ++P+ + ++ Sbjct: 26 RAGFLMMRNLLDGGFNGPILPVTPIHKAVSGVLAYANIASLPI-----------TPDLAI 74 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + + + ++ ++ + KA ++ RL+GPN G+L P Sbjct: 75 LCTHDRRNLTLLEDLGTRGCKAVIILSAATEQFPEL--KACAQRHHMRLLGPNSLGLLAP 132 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 +KG + +S+S + + Q +G S + +G + + Sbjct: 133 WQGLNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIALGDSLDIDVDDL- 191 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 L+ D T +I++ E +A +FL R KPI+ +G++ Sbjct: 192 -LDFLARDGKTSAIMLYIEHIS----DARRFLSASRSASRNKPILVVKSGRSQ------- 239 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A +++G +G A++ AG+ + ++ L Sbjct: 240 RAQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|289706922|ref|ZP_06503259.1| CoA binding domain protein [Micrococcus luteus SK58] gi|289556357|gb|EFD49711.1| CoA binding domain protein [Micrococcus luteus SK58] Length = 892 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 86/227 (37%), Gaps = 24/227 (10%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP------VLDMVRVKARLEKSSSR 123 + V+ VP I E+ A +V +T G + R+ + R Sbjct: 244 PVDLVVVAVPADEVEALIPEAAAAGAQGLVVLTSGYADAGAEGLEAQRRLVSLARAHGMR 303 Query: 124 LIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +IGP G++ D + ++G V + S+SG + + G+G ST++ Sbjct: 304 VIGPASTGLVRTDPAIRLNASPSPGLAQRGPVSLFSQSGAVGAMVSAGVKRRGVGISTSI 363 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G D ++ F AD T ++ + E G+ +F + + R KP+V Sbjct: 364 SAGNRA--DVSGNDAMQFFEADPHTAAVGVYLESFGNP----RKFSRIARRLSRTKPVVV 417 Query: 242 F---VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 V G+ PPG H +G + ++ + G+ A + Sbjct: 418 VRSDVTGRFLPPG----HETRTTQAPEGTVDSMLD---QTGVLEAHT 457 >gi|318604496|emb|CBY25994.1| protein acetyltransferase [Yersinia enterocolitica subsp. palearctica Y11] Length = 880 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 96/281 (34%), Gaps = 29/281 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHP-KKG--STYWTGGNVNVPVFTTVAEAKERTAANASV 75 +AG + + + P K ++P+ + ++ Sbjct: 26 RAGFLMMRNLLDGGFNGPILPVTPIHKAVSGVLAYANIASLPI-----------TPDLAI 74 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + + + ++ ++ + KA ++ RL+GPN G+L P Sbjct: 75 LCTHDRRNLTLLEDLGTRGCKAVIILSAATEQFPEL--KACAQRHHMRLLGPNSLGLLAP 132 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 +KG + +S+S + + Q +G S + +G + + Sbjct: 133 WQGLNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIALGDSLDIDVDDL- 191 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 L+ D T +I++ E +A +FL R KPI+ +G++ Sbjct: 192 -LDFLARDGKTSAIMLYIEHIS----DARRFLSASRSASRNKPILVVKSGRSQ------- 239 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A +++G +G A++ AG+ + ++ L Sbjct: 240 RAQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|107100459|ref|ZP_01364377.1| hypothetical protein PaerPA_01001484 [Pseudomonas aeruginosa PACS2] Length = 695 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 92/284 (32%), Gaps = 30/284 (10%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 + G + + + ++P + +P F +VAE + +A+++ Sbjct: 17 TRIGGRPIAYMLRHGYAGQILPVNPNRA------EIQGLPAFASVAELPQAP--DAAIVA 68 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR------VKARLEKSSSRLIGPNCPG 131 VP + + + + G + V A + RL+GPN G Sbjct: 69 VPAPQVLETVRALGRQGARSAIVFSSGFSEVGEAGAAMQDAVVAAAREYGMRLLGPNALG 128 Query: 132 ILTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + S+ R G VGI ++SG + Q LG V G + Sbjct: 129 AFNSNLGYYAFFSTSLERGVPLPGRVGIATQSGAYGAHLLGMARQRRLGTPICVATGNEA 188 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 D + + + ++ E + + A KP++ G++ Sbjct: 189 --DVTLGDSIGWLVESPEIDVVMAYAESIRNVDSFLAALEAAHRAG---KPVILHKVGRS 243 Query: 248 APPGRTMGHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARI 289 A R A ++G +DK+ + + + A + + Sbjct: 244 ALGSRAALSHTASLAG-----DDKVLDAVLGDYAVIRARTTEEL 282 >gi|238795642|ref|ZP_04639157.1| hypothetical protein ymoll0001_12330 [Yersinia mollaretii ATCC 43969] gi|238720761|gb|EEQ12562.1| hypothetical protein ymoll0001_12330 [Yersinia mollaretii ATCC 43969] Length = 880 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 97/281 (34%), Gaps = 29/281 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHP-KKG--STYWTGGNVNVPVFTTVAEAKERTAANASV 75 +AG + + + + P K ++P+ + ++ Sbjct: 26 RAGFLMMRNLLDGGFSGPILPVTPTHKAVCGVLAYADIASLPI-----------TPDLAI 74 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + + + ++ ++ + +KA + RL+GPN G+L P Sbjct: 75 LCTHDRRNLALLEDLGVRGCKAVIILSA--ATEQLAELKACAHRHHMRLLGPNSLGLLAP 132 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 +KG + +S+S + + Q +G S + +G + + Sbjct: 133 WQGLNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIALGDSLDIDVDDL- 191 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 L+ D T +I++ E +A +FL R KPI+ +G+T Sbjct: 192 -LDFLARDGKTSAIMLYIEHIS----DARRFLSASRSASRNKPILVVKSGRTQ------- 239 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A +++G +G A++ AG+ + ++ L Sbjct: 240 RAQQLLNGQEGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|123443448|ref|YP_001007421.1| putative acetyltransferase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090409|emb|CAL13277.1| putative acetyltransferase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 880 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 96/281 (34%), Gaps = 29/281 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHP-KKG--STYWTGGNVNVPVFTTVAEAKERTAANASV 75 +AG + + + P K ++P+ + ++ Sbjct: 26 RAGFLMMRNLLDGGFNGPILPVTPTHKAVCGVLAYADIASLPI-----------TPDLAI 74 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + + + ++ ++ + KA ++ RL+GPN G+L P Sbjct: 75 LCTHDRRNLTLLEDLGTRGCKAVIILSAATEQFPEL--KACAQRHHIRLLGPNSLGLLAP 132 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 +KG + +S+S + + Q +G S + +G + + Sbjct: 133 WQGLNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIALGDSLDIDVDDL- 191 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 L+ D T +I++ E +A +FL R KPI+ +G++ Sbjct: 192 -LDFLARDGKTSAIMLYIEHIS----DARRFLSASRSASRNKPILVVKSGRSQ------- 239 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A +++G +G A++ AG+ + ++ L Sbjct: 240 RAQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|238793923|ref|ZP_04637542.1| hypothetical protein yinte0001_28290 [Yersinia intermedia ATCC 29909] gi|238726690|gb|EEQ18225.1| hypothetical protein yinte0001_28290 [Yersinia intermedia ATCC 29909] Length = 880 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 97/281 (34%), Gaps = 29/281 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHP-KKG--STYWTGGNVNVPVFTTVAEAKERTAANASV 75 +AG + + + P K N+P+ + ++ Sbjct: 26 RAGFLMMRNLLDGGFNGPILPVTPTHKAVCGVLAYANIANLPI-----------TPDLAI 74 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + S + + ++ ++ + KA ++ RL+GPN G+L P Sbjct: 75 LCTHDSRNLALLEDLGIRGCKAVIILSAATEQFPEL--KACAQRHHMRLLGPNSLGLLAP 132 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 +KG + +S+S + + Q +G S + +G + + Sbjct: 133 WQGLNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIALGDSLDIDVDDL- 191 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 L+ D T +I++ E +A +FL R KPI+ +G+T Sbjct: 192 -LDFLARDGKTSAIMLYIEHIS----DARRFLSASRSASRNKPILVVKSGRTQ------- 239 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A +++G +G A++ AG+ + ++ L Sbjct: 240 RAQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|196020151|ref|XP_002119096.1| hypothetical protein TRIADDRAFT_35141 [Trichoplax adhaerens] gi|190576980|gb|EDV18419.1| hypothetical protein TRIADDRAFT_35141 [Trichoplax adhaerens] Length = 62 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 5/67 (7%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 MS+LV+ TKV+ QG TG GTFH+EQAI Y T++VGG+ P KG + G +PVF Sbjct: 1 MSVLVNSQTKVICQGFTGAQGTFHSEQAIQY-GTKMVGGVTPGKGGSTHLG----LPVFN 55 Query: 61 TVAEAKE 67 TV EA + Sbjct: 56 TVEEAVK 62 >gi|121596261|ref|YP_988157.1| CoA-binding domain-containing protein [Acidovorax sp. JS42] gi|120608341|gb|ABM44081.1| CoA-binding domain protein [Acidovorax sp. JS42] Length = 695 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 86/273 (31%), Gaps = 23/273 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P + G+ + + +A E + ++I V A+ E + Sbjct: 39 YRGTIYPINPAREEVQGHKS---YAGLAALPEVP--DLALIAVGGDKTVAAVEECAARGV 93 Query: 96 PLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIG----IMPG 145 V I G + A + RL GPN G+ + I + Sbjct: 94 KSAVVIASGFGETGPAGRELQDHMVATARAAGMRLYGPNTQGLANFGTGAIAGFSTMFIE 153 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 G VGI+S+SG ++ A GLG G + ++ D Sbjct: 154 VPPMDGPVGIVSQSGGMSAMAYGLLRGRGLGVRHVHATGNEA--DVTASEMAWAVAHDPD 211 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK 265 + +++ E E AA R R PIV AG++A + ++ Sbjct: 212 VQLLLLYLENIAHPEMLAA---TAAYARERDLPIVAVKAGRSASGQKAASSHTGALANED 268 Query: 266 GGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + K GI P R+ L Sbjct: 269 RTVD---AFFKHHGIWRVRDPHEQARAAHAYLK 298 >gi|222112490|ref|YP_002554754.1| CoA-binding domain-containing protein [Acidovorax ebreus TPSY] gi|221731934|gb|ACM34754.1| CoA-binding domain protein [Acidovorax ebreus TPSY] Length = 695 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 86/273 (31%), Gaps = 23/273 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P + G+ + + +A E + ++I V A+ E + Sbjct: 39 YRGTIYPINPAREEVQGHKS---YAGLAALPEVP--DLALIAVGGDKTVAAVEECAARGV 93 Query: 96 PLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIG----IMPG 145 V I G + A + RL GPN G+ + I + Sbjct: 94 KSAVVIASGFGETGPAGRELQDHMVATARAAGMRLYGPNTQGLANFGTGAIAGFSTMFIE 153 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 G VGI+S+SG ++ A GLG G + ++ D Sbjct: 154 VPPMDGPVGIVSQSGGMSAMAYGLLRGRGLGVRHVHATGNEA--DVTASEMAWAVAHDPD 211 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK 265 + +++ E E AA R R PIV AG++A + ++ Sbjct: 212 VQLLLLYLENIAHPEMLAA---TAAYARERDLPIVAVKAGRSASGQKAASSHTGALANED 268 Query: 266 GGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 + K GI P R+ L Sbjct: 269 RTVD---AFFKHHGIWRVRDPHEQARAAHAYLK 298 >gi|315425442|dbj|BAJ47106.1| acetyl-CoA synthetase (ADP-forming), alpha and beta subunit [Candidatus Caldiarchaeum subterraneum] Length = 703 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 93/250 (37%), Gaps = 28/250 (11%) Query: 58 VFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL 117 V+ V+E + V+ VP + D + ++ +V I+ G ++ RL Sbjct: 59 VYRRVSEINDE--VELVVVAVPATAVPDVVADAAGHGARAVVVISGGFSEAGNRELENRL 116 Query: 118 EK----SSSRLIGPNCPGILTPDSCKIGIMPGS--------------IFRKGSVGILSRS 159 + + RL+GPN GI+ P + RKG+V I+S+S Sbjct: 117 RQVVVETGIRLLGPNTIGIIDPYTGVDTSFTRETKPFADGTWGRAIIYPRKGNVAIISQS 176 Query: 160 GTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSA 219 G L Y ++ G+G A +G + + F D T IV+ E Sbjct: 177 GALAYHSIDLFGDRGVGLRAAACVGNQVDVNITM--LADYFSDDPLTRVIVLYVEGVADG 234 Query: 220 EEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAG 279 LK R R K +V AG+TA GR A + G + +++AG Sbjct: 235 RGLLNAVLKA---RHRGKQVVVLKAGRTAVGGRAAYTHTASMVGEW---DVFTGCLRQAG 288 Query: 280 ICIAPSPARI 289 + ++ Sbjct: 289 AMVVTGVEQM 298 >gi|158319907|ref|YP_001512414.1| FdrA family protein [Alkaliphilus oremlandii OhILAs] gi|158140106|gb|ABW18418.1| FdrA family protein [Alkaliphilus oremlandii OhILAs] Length = 518 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 88/200 (44%), Gaps = 13/200 (6%) Query: 50 TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 G N P F + K +N +I +P + A +++E + ++ ++ + V + Sbjct: 95 LSGEYNPPTFDS--AVKLAPDSNLVLISLPGAYAFGEAKKALERGMH-VMLFSDNVSVEE 151 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 +K ++ ++GP+C + + + ++ +KGS+GI+ SGT T E Sbjct: 152 EKTLKELGKEMGLLVMGPDCGTAII---NNVPLAFANVIKKGSIGIVGASGTGTQEVSVI 208 Query: 170 TSQEGLGQSTAVGIGGD----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + G G S +G GG + G ++ ++ D T+ IV++ + E A+ Sbjct: 209 IDKLGGGVSQVIGTGGRDLSKDIGGIMMMESIKALSQDPETKVIVLISKPPA---AEIAE 265 Query: 226 FLKDEAKRGRKKPIVGFVAG 245 + AK K +V F+ G Sbjct: 266 KVLALAKESGKPFVVDFIGG 285 >gi|255994741|ref|ZP_05427876.1| acetyl coenzyme A synthetase [Eubacterium saphenum ATCC 49989] gi|255993454|gb|EEU03543.1| acetyl coenzyme A synthetase [Eubacterium saphenum ATCC 49989] Length = 471 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 97/272 (35%), Gaps = 21/272 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 K G E + + ++P+ + + + TV + + + Sbjct: 33 TKVGYKVIEGLREWGYKGEIYPVNPRSDKVH------GLKAYPTVKDIPYA--VDLVFVA 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA----RLEKSSSRLIGPNCPGIL 133 VP + + + ++ ++V T + +++ + LIGPN G+ Sbjct: 85 VPAHIVKSVLEDCVAKKVNIVVIATSAFKEIGRGQLQNDLTQYCRDNKLPLIGPNLVGMG 144 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 +P + +G V ++S+SG A+ + ++ G S VG+G +F Sbjct: 145 SPYLNFNCGFIPYLPMEGPVAMISQSGANLLAALGTSQKDHFGMSFFVGLGNKA--DVDF 202 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 + + D+ T+ + + E S E EA + KPIV G + + Sbjct: 203 CEFVSYAGIDDDTKCLAIYIEGLDSPEGFV------EACQKVDKPIVTIKVGGSKIGVKA 256 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 A + G G A ++AG A + Sbjct: 257 AFAHTASENEGTGDAY-YDEVFQKAGAIRATT 287 >gi|291549180|emb|CBL25442.1| acetyl-CoA synthetase (ADP-forming) alpha subunit /branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit [Ruminococcus torques L2-14] Length = 469 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 97/272 (35%), Gaps = 21/272 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 K G + + + + ++P+ + TV + + + + + Sbjct: 33 TKVGYKVVDGLLTWGYKGKIYPVNPR------ADKVAGFTAYKTVKDIPDE--IDLAFLA 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK----ARLEKSSSRLIGPNCPGIL 133 VP + + +E ++ ++V T + ++ LIGPN G+ Sbjct: 85 VPAHIVKSVLEDCVEKKVKIVVIATSAFKEIGRGTLQDELTQYCRDHELPLIGPNLVGMG 144 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 +P + KG V ++S+SG A+ + ++ G S VG+G +F Sbjct: 145 SPYLNFNCGFIPYLPIKGPVAMISQSGANLLAALGTSQKDHFGMSFFVGLGNKA--DVDF 202 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 + + DE ++ + + E S + EA R KPIV G + + Sbjct: 203 CEFISYAGRDENSKCLAIYIEGLDSPDA------FIEACRSVDKPIVTIKVGGSKIGEKA 256 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 A + G A + ++AG A + Sbjct: 257 AFAHTASENKGTNDAF-YDDIFEKAGAIRATT 287 >gi|194442658|ref|YP_002039773.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194401321|gb|ACF61543.1| protein FdrA [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 554 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN +++ V A + ++++ + ++ ++ + + D +R+K R Sbjct: 110 SACQKLPEANLALVSVAGEYAAELAEQALDRSLN-VMIFSDNVTLDDEIRLKRRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + ++ ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTAMIANTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE ++ + V + A Q + K KP Sbjct: 226 LGGRDLSAEVGGISALTALEILSADENSQVLAFVSKPPADA---VRQHIIAAMKATG-KP 281 Query: 239 IVGFVAGKTAPPGR 252 +V G ++P R Sbjct: 282 VVALFLGFSSPVAR 295 >gi|225570563|ref|ZP_03779588.1| hypothetical protein CLOHYLEM_06665 [Clostridium hylemonae DSM 15053] gi|225160576|gb|EEG73195.1| hypothetical protein CLOHYLEM_06665 [Clostridium hylemonae DSM 15053] Length = 1003 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 89/215 (41%), Gaps = 16/215 (7%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPN 128 AN +VI +P + A +++ + + ++ + + D +++K + + ++GP+ Sbjct: 114 PEANLAVISIPGAYAALEADRALDEGMN-VFMFSDNVTLEDEIKLKNKAHEKGLAVMGPD 172 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP- 187 C + + + + GS+GI+ SGT E + G G A+G GG Sbjct: 173 CGTGIIQG---VPVAFTNNVTPGSIGIIGASGTGIQELTTIIDRLGEGVKNAIGTGGRDL 229 Query: 188 ---VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 V GT +D++E +D + + ++++ + +E + D RK I F+ Sbjct: 230 SIEVGGTTMMDMIEAMESDTSVKVLIIISKPPA---KEVRDRISDRLSNFRKPVITLFLG 286 Query: 245 GKTAPPGRTMGHA-----GAVISGGKGGAEDKINA 274 K HA A ++ G E+ A Sbjct: 287 EKPEYHEEGFYHAYTLDEAARLAVGLVRGEEVKEA 321 >gi|156937180|ref|YP_001434976.1| CoA-binding domain-containing protein [Ignicoccus hospitalis KIN4/I] gi|156566164|gb|ABU81569.1| CoA-binding domain protein [Ignicoccus hospitalis KIN4/I] Length = 455 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 99/280 (35%), Gaps = 23/280 (8%) Query: 1 MSILVDKNTKVLVQGLTGKAGT--FHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPV 58 M L K + V V G T K + + + ++PK + VP Sbjct: 1 MDFLF-KPSSVAVVGATPKVPKPGYVILSNMKRSYKGKLYAVNPK------YKEVLGVPC 53 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM----VRVK 114 + ++ E + +V+ VP S + ++IE ++ ++ IT G + R+K Sbjct: 54 YPSLREVPDE--VELAVVAVPTSAVEAVVDDAIEKDVRALIIITSGFSEVGNEELENRIK 111 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPG----SIFRKGSVGILSRSGTLTYEAVFQT 170 + R++GPNC GI S R + ++S+SG L + Sbjct: 112 EKALSHGIRVVGPNCLGIYYYPSGLDTFFFREAGTPRPRPSGLALVSQSGALAASLMDWA 171 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + G G AV +G G +VL E +M E E +A + Sbjct: 172 ASRGCGVGAAVSLGNKVDVGES--EVLNYLFG-EGFNHFLMYIEGLREGEGKAFLETVLK 228 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + G + I + G+ + A ++G D Sbjct: 229 LRLGGAR-IGFYKGGRKRESAAAVASHTASVAGDYKAYRD 267 >gi|291166265|gb|EFE28311.1| acetyl coenzyme A synthetase (ADP forming) [Filifactor alocis ATCC 35896] Length = 469 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 93/274 (33%), Gaps = 25/274 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G E + + + ++P+ + TV + + I Sbjct: 33 GKVGFKVIEGLLNWGYKGKIYPVNPR-AEKVHGFD-----AYPTVQDIP--HDVDLVFIA 84 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKA----RLEKSSSRLIGPNCPGIL 133 VP + + + + ++V T + ++ +IGPN G+ Sbjct: 85 VPAHIVKSVLEDCVAKKAKIVVIATSAFKEIGRGDLQNQLTQYCRDHKLPMIGPNLVGMG 144 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 +P + +G V ++S+SG A+ + ++ G S VG+G +F Sbjct: 145 SPYLHFNCGFIPYLPIEGPVAMISQSGANLLAALGTSQKDHFGMSFFVGLGNKA--DVDF 202 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEE--EAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 + + D+ T+ + + E S E +A + KPIV G + Sbjct: 203 CEFISYAGVDDNTKCLAVYIEGLDSPEAFIDACK--------SVNKPIVTIKVGGSKIGV 254 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + A + G + ++AG A + Sbjct: 255 KAAFAHTASENEGT-TDKFYDEVFEKAGAIRATT 287 >gi|170750308|ref|YP_001756568.1| GCN5-related N-acetyltransferase [Methylobacterium radiotolerans JCM 2831] gi|170656830|gb|ACB25885.1| GCN5-related N-acetyltransferase [Methylobacterium radiotolerans JCM 2831] Length = 891 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 74/192 (38%), Gaps = 11/192 (5%) Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 P RL+GP+ G+ P + + G + ++S+SGT+ Sbjct: 108 PEDPGPVAHGIARAHGLRLLGPDSAGLAVPGAKLNASLFAHAPLAGDLALVSQSGTVAAA 167 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 V ++ G G S + +G G D L+ F AD T +I++ + +A + Sbjct: 168 IVAWGARHGTGFSAVLSLGSVLDIGV--ADCLDHFAADYRTRAILLCLDRVA----DARR 221 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAP 284 F+ R KP+V AG+ P R H GA+ A A + AG+ P Sbjct: 222 FMSAARAAARAKPVVVLRAGRHRPDTRAAVTHTGALARPDAVYA----AAFRRAGLLAVP 277 Query: 285 SPARIGRSLVEL 296 + ++ L Sbjct: 278 DLDAMFSAVETL 289 >gi|46200013|ref|YP_005680.1| 6-carboxyhexanoate-CoA ligase [Thermus thermophilus HB27] gi|46197640|gb|AAS82053.1| 6-carboxyhexanoate-CoA ligase [Thermus thermophilus HB27] Length = 745 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 94/243 (38%), Gaps = 20/243 (8%) Query: 36 VVGGIHP------KKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE 89 G + P ++G T G + P +V + V+ VP +A+ Sbjct: 233 FQGPVFPVNEAIGREGGTV--GPLLAYPGLESVPG-----PVDLVVVAVPKERVPEALEA 285 Query: 90 SIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC-KIGIMPGSIF 148 + + +T G + + + + RL+GP G++ ++ + Sbjct: 286 AGRRGARGAIVLTTGFTPKEAQALADKARRLGMRLLGPGSLGLVHTHPGVRLAAGLAPLP 345 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 ++G + I S+SGTL + + GLG ++ V +G + D+L+ + DE T Sbjct: 346 KEGVLAISSQSGTLGRAVLAFAEEMGLGVASFVSLGAKADISSN--DLLQFWEEDERTRV 403 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 I++ E G+ +F + + G+KKPI+ + AG V + A Sbjct: 404 ILLYLEHFGNP----RRFSRLARRIGKKKPILAVHPSRDPLVRALFAQAGVVRANSLEEA 459 Query: 269 EDK 271 D Sbjct: 460 FDV 462 >gi|150388522|ref|YP_001318571.1| FdrA family protein [Alkaliphilus metalliredigens QYMF] gi|149948384|gb|ABR46912.1| FdrA family protein [Alkaliphilus metalliredigens QYMF] Length = 525 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 88/217 (40%), Gaps = 15/217 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 A K + AN ++ +P A D + +++ +I ++ ++ + + D R+K ++ Sbjct: 106 AALKYQLDANLVLVSIPGEYAFDEVEKALHQDIH-VMLFSDQMSMADERRLKEIAKERQL 164 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + ++ + ++ RKG++GI+ SGT E + G G S +G Sbjct: 165 LMMGPDCGTAII---NQVPLAFANVVRKGNIGIVGASGTGIQEVSILIHRLGEGVSQVIG 221 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 GG + G +E D T IV++ + +EE A+ + KP Sbjct: 222 TGGRDLKKEIGGIMMQQGIEALQNDPETGVIVLISKP---PDEEVAERVLALIAHSE-KP 277 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +V G G A K A+ Sbjct: 278 VVVNFIGGHLNLIEKYGRTPC---TTLEDAAQKAVAL 311 >gi|238765062|ref|ZP_04625998.1| hypothetical protein ykris0001_30300 [Yersinia kristensenii ATCC 33638] gi|238696748|gb|EEP89529.1| hypothetical protein ykris0001_30300 [Yersinia kristensenii ATCC 33638] Length = 887 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 96/281 (34%), Gaps = 29/281 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHP-KKG--STYWTGGNVNVPVFTTVAEAKERTAANASV 75 +AG + + + P K ++P+ + ++ Sbjct: 33 RAGFLMMRNLLDGGFNGPILPVTPTHKAVCGVLAYANIASLPM-----------TPDLAI 81 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + + + ++ ++ + KA ++ RL+GPN G+L P Sbjct: 82 LCTHDRRNLSLLEDLGTRGCKAVIILSAATEQFPEL--KACAQRHHMRLLGPNSLGLLAP 139 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 +KG + +S+S + + Q +G S + +G + + Sbjct: 140 WQGLNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIALGDSLDIDVDDL- 198 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 L+ D T +I++ E +A +FL R KPI+ +G++ Sbjct: 199 -LDFLARDGKTSAIMLYIEHIS----DARRFLSASRSASRNKPILVVKSGRSQ------- 246 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A +++G +G A++ AG+ + ++ L Sbjct: 247 RAQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 287 >gi|84502420|ref|ZP_01000556.1| pimeloyl-CoA synthetase [Oceanicola batsensis HTCC2597] gi|84389232|gb|EAQ02029.1| pimeloyl-CoA synthetase [Oceanicola batsensis HTCC2597] Length = 701 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 88/261 (33%), Gaps = 28/261 (10%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK+ + + ++ V + +++ VP D + ++ + Sbjct: 45 PVNPKRETVQGLTCHPDIASLPEV--------PDTAILAVPARATLDTVHACLDKGVKSA 96 Query: 99 VCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCKIGIMP----GSIF 148 V + G + + RL+GPNC G++ P G ++ Sbjct: 97 VIFSAGFAETGADGQRVQEEIANVAREGGLRLLGPNCLGVMNPAKGYYGTFSVVLDNALL 156 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 G VGI+S+SG +G S + G + + + L+ + T Sbjct: 157 NPGVVGIVSQSGAYGAHIAHLARARNMGISQWITTGNE--CDVDVSEALDWMVQQPETRV 214 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 ++ E E E + K IV G+++ A + G+ Sbjct: 215 VMAYAEGVRDYERFIDAL---EKAQSLGKAIVFMKTGRSSAGAVAA----ASHTAALAGS 267 Query: 269 EDKINA-MKEAGICIAPSPAR 288 + +A +++ G A S A Sbjct: 268 DSVFDAVLRQYGAHRAASTAE 288 >gi|187920449|ref|YP_001889481.1| CoA-binding domain-containing protein [Burkholderia phytofirmans PsJN] gi|187718887|gb|ACD20110.1| CoA-binding domain protein [Burkholderia phytofirmans PsJN] Length = 704 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 96/260 (36%), Gaps = 26/260 (10%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P+ + + + VA E + ++ + A A+ E Sbjct: 44 PVNPR------SETIDGLRCYPDVASLPEAP--DVGIVLLGAERAHAAVRELARLGTRAA 95 Query: 99 VCITEGIPVLDMVRVKARLE----KSSSRLIGPNCPGILTPDSCKI----GIMPGSIFRK 150 + + G + + E S RL+GPN G++ + G + S F Sbjct: 96 IVLASGYAETGEEGARRQAELIEAAGSMRLLGPNTIGLVNLTEGIMLSASGALETSSFTA 155 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G +G++S+SG + + + + G+G S V + + D ++ + D+AT I Sbjct: 156 GGIGVVSQSGGILGSLLSRAASRGIGLSKLVSTSNEA--DLDVADFVDYLVDDDATSVIA 213 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + E E L KPIV F G++ R+ +G GA+ Sbjct: 214 LYMEGLRHPE---RFRLAAMRAAAAGKPIVVFKIGRSESGARS----AVSHTGALAGADR 266 Query: 271 KINA-MKEAGICIAPSPARI 289 +A ++ G+ A + + Sbjct: 267 MYDALFQQLGVNRAEKFSDL 286 >gi|296535845|ref|ZP_06898005.1| 6-carboxyhexanoate-CoA ligase [Roseomonas cervicalis ATCC 49957] gi|296263825|gb|EFH10290.1| 6-carboxyhexanoate-CoA ligase [Roseomonas cervicalis ATCC 49957] Length = 689 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 100/262 (38%), Gaps = 30/262 (11%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P+ +P + +A A +A+++ + P A A+ + Sbjct: 44 PVNPR------ADSIAGLPCYAEIAALP--GAPDAAIVLLGPERAEAAVRDLAARGCQAA 95 Query: 99 VCITEGIPVLDMVRVKARLEKSS----SRLIGPNCPGILTPDSCKI----GIMPGSIFRK 150 + + G + + + RL+GPN G++ + G + Sbjct: 96 IVLASGYGEANEDGARRQQALKDAAGPMRLLGPNTIGLVNLTDRMMLSATGALEVGDLAA 155 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G + ++S+SG + + + + G+G + V G + + +++ + DEAT+ I Sbjct: 156 GRISVVSQSGGILGSLLSRAADRGIGFAKLVSTGNEADIDSS--EMIAHLVEDEATDVIA 213 Query: 211 MVGEIGGSAE--EEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 + E E ++AA+ KPIV + G++ A +G GA Sbjct: 214 VYMEGLRRPELFKQAAR-----RAAALGKPIVVYKVGRSESGA----QAATSHTGALAGA 264 Query: 269 EDKINA-MKEAGICIAPSPARI 289 + +A ++ G+ A S + Sbjct: 265 DRVYDALFRQHGVIRAESFTDL 286 >gi|55980245|ref|YP_143542.1| acyl-CoA synthetase [Thermus thermophilus HB8] gi|55771658|dbj|BAD70099.1| probable acyl-CoA synthetase [Thermus thermophilus HB8] Length = 706 Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 94/243 (38%), Gaps = 20/243 (8%) Query: 36 VVGGIHP------KKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE 89 G + P ++G T G + P +V + V+ VP +A+ Sbjct: 194 FQGPVFPVNEAIGREGGTV--GPLLAYPGLESVPG-----PVDLVVVAVPKERVPEALEA 246 Query: 90 SIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC-KIGIMPGSIF 148 + + +T G + + + + RL+GP G++ ++ + Sbjct: 247 AGRRGARGAIVLTTGFTPKEAQALADKARRLGMRLLGPGSLGLVHTHPGVRLAAGLAPLP 306 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 ++G + I S+SGTL + + GLG ++ V +G + D+L+ + DE T Sbjct: 307 KEGVLAISSQSGTLGRAVLAFAEEMGLGVASFVSLGAKADISSN--DLLQFWEEDERTRV 364 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 I++ E G+ +F + + G+KKPI+ + AG V + A Sbjct: 365 ILLYLEHFGNP----RRFSRLARRIGKKKPILAVHPSRDPLVRALFAQAGVVRANSLEEA 420 Query: 269 EDK 271 D Sbjct: 421 FDV 423 >gi|85858300|ref|YP_460502.1| acetyl-CoA synthetase subunit beta [Syntrophus aciditrophicus SB] gi|85721391|gb|ABC76334.1| acetyl-CoA synthetase beta subunit [Syntrophus aciditrophicus SB] Length = 700 Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 94/257 (36%), Gaps = 28/257 (10%) Query: 50 TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 G V V+ VA+ E + ++ +P + D + E + I +V + G Sbjct: 46 EGEIAGVHVYRNVADLPEVP--DLALFIIPAAAIPDQLEECGKLGIRRVVIESGGFSEFS 103 Query: 110 MVRVKARLEK-------SSSRLIGPNCPGILTPDSCKIGIMPGSIFRK----GSVGILSR 158 + A EK R IGPNC G + D + MP +++ G VGI+S+ Sbjct: 104 REKSNALEEKLLDIAACHDIRFIGPNCIGAVNYDLNLL--MPFLLYKNTLPGGRVGIISQ 161 Query: 159 SGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGS 218 SG + + + + + V IG D LE FL DE T+ +++ E Sbjct: 162 SGGIGHYYLEHLPENSVRPGKMVSIGNKLQIDET--DFLEYFLEDEHTDQVIIYLEGFKR 219 Query: 219 AEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM-KE 277 + KP++ A + A +S +D ++ + ++ Sbjct: 220 GRDFF------HTALSASKPVILHKANRNPQSALIARSHSAALSAS----DDVVDGLCRQ 269 Query: 278 AGICIAPSPARIGRSLV 294 A I RS+ Sbjct: 270 AAIIRVEDDEEAIRSVK 286 >gi|317125071|ref|YP_004099183.1| CoA-binding protein [Intrasporangium calvum DSM 43043] gi|315589159|gb|ADU48456.1| CoA-binding domain protein [Intrasporangium calvum DSM 43043] Length = 902 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 112/296 (37%), Gaps = 25/296 (8%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 +IL + KV + G + +A + G ++P + + T Sbjct: 214 TILFPE--KVAIIGASRRAESTGALVLRNLIGAGFEGELYP---IHREAAEIQGLQAYPT 268 Query: 62 VAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKA 115 +A+A + +V+ VP + + + E A + ++ ++ G D R++ Sbjct: 269 IADAP--GPVDLAVVVVPAVDSVEVVEECGRAGVKALLVLSSGFAEADEEGARLQERLRT 326 Query: 116 RLEKSSSRLIGPNCPGILTP--DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + R++GPN G++ + I +G +G+ ++SG L + ++ Sbjct: 327 SARSAGMRVVGPNSFGLINNQRGVRLNATLASVIPAEGRLGLFAQSGALGIAVLASAARR 386 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 GLG S G D+++ ++ D+ T ++ + E G+ +F + Sbjct: 387 GLGISIFASAGNR--IDVSGNDLMQYWIDDQDTTTVGLYLESMGNP----RKFSRIARHL 440 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 KP++ +G + GH + + +++AG+ + ++ Sbjct: 441 ASVKPVIVVSSGVSQ-YAVPPGHRTRTPNVPP---QAFDALLRQAGVIRVENVHQL 492 >gi|218893023|ref|YP_002441892.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa LESB58] gi|218773251|emb|CAW29063.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa LESB58] Length = 715 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 92/284 (32%), Gaps = 30/284 (10%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 + G + + + ++P + +P F +VAE + +A+++ Sbjct: 37 TRIGGRPIAYMLRHGYAGQILPVNPNRA------EIQGLPAFASVAELPQAP--DAAIVA 88 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR------VKARLEKSSSRLIGPNCPG 131 VP + + + + G + V A + RL+GPN G Sbjct: 89 VPAPQVLETVRALGRQGARSAIVFSSGFSEVGEAGAAMQDAVVAAAREYGMRLLGPNALG 148 Query: 132 ILTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + S+ R G VGI ++SG + Q LG V G + Sbjct: 149 AFNSNLGYYAFFSTSLERGVPLPGRVGIATQSGAYGAHLLGMARQCRLGTPICVATGNEA 208 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 D + + + ++ E + + A KP++ G++ Sbjct: 209 --DVTLGDSIGWLVESPEIDVVMAYAESIRNVDSFLAALEAAHRAG---KPVILHKVGRS 263 Query: 248 APPGRTMGHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARI 289 A R A ++G +DK+ + + + A + + Sbjct: 264 ALGSRAALSHTASLAG-----DDKVLDAVLGDYAVIRARTTEEL 302 >gi|317487129|ref|ZP_07945932.1| CoA binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316921613|gb|EFV42896.1| CoA binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 542 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 89/283 (31%), Gaps = 26/283 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G AG+ T V I+PK P + ++ + A+ + + Sbjct: 53 GGAGSIVLRNMQRLGYTGTVYPINPK------YKEIFGYPCYASLRDLPA--PADCAAVL 104 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPG 131 + + E+ A + + G R+ +S GPNC G Sbjct: 105 LGSRSLLPMLEEAHAAGVKGVWGFASGFAETGGEGRAMQRRIHDFCHESGLLFCGPNCVG 164 Query: 132 I--LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 +T +C FR G +G++++SG + + G S + G + Sbjct: 165 YANITDKTCMYSAPLPQAFRPGDIGVIAQSGAVLLALGN--ANRMAGFSRLISSGNEAAL 222 Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP 249 G D ++ + D+AT I + E E AA + K KP++ G+ Sbjct: 223 GL--ADYMDYLVDDDATHVIALFIETIRDPEAFAAACSRAAEKG---KPVIALKVGR--- 274 Query: 250 PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 A G + A + + + + Sbjct: 275 SELACRVAATHTGAIAGSDRILDAFFRRANVMRVNTLDDLLET 317 >gi|269959741|ref|ZP_06174120.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269835495|gb|EEZ89575.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 877 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 98/286 (34%), Gaps = 43/286 (15%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA-------A 71 +AG + + + PK + +V+ Sbjct: 24 RAGQIVMRNLLQSGFGGAIMPVTPK---------------YKSVSGVIAYPNVASLPYTP 68 Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPG 131 + +++ S + E E + I++ LD L + R++GPN G Sbjct: 69 DIAILCTNVSRNKHLLKELDERGTEFAIVISDDAESLD-------LSDLNIRVLGPNSLG 121 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 I+ P + G + +S+S + + + + +G S+ + IG Sbjct: 122 IILPWHHFNCSFSPVAAKPGKIAFISQSAAVCTTVLDWANDKNIGFSSFISIGQGQ--DI 179 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F ++L+ D TE+I++ + + ++A +F+ R + I+ AG+ Sbjct: 180 DFAELLDYLSMDGKTEAILLYVD----SIKDARRFMSAARAASRNRRILVLKAGR----- 230 Query: 252 RTMGHAGAVISGGKGGAED-KINAMKEAGICIAPSPARIGRSLVEL 296 A + + +A++ G+ + + ++ L Sbjct: 231 --STQARTLGEKDLDSLDVIYDSAIRRTGMLRVGNTHELFAAVETL 274 >gi|239820791|ref|YP_002947976.1| CoA-binding domain protein [Variovorax paradoxus S110] gi|239805644|gb|ACS22710.1| CoA-binding domain protein [Variovorax paradoxus S110] Length = 698 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 95/263 (36%), Gaps = 23/263 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P GG P ++ + ++ + A A+ E Sbjct: 41 FTGEIYPVNPRADAIGGLACYPDIASIPGT-----PDVGIVLLGAERAHQAVRELAAKGT 95 Query: 96 PLIVCITEGIPVLDMVRVKARLE----KSSSRLIGPNCPGILTPDSCKI----GIMPGSI 147 + + G + + + R++GPN G++ + G + Sbjct: 96 AAAIVLASGYTETGEEGARRQQQLIEAAGGMRILGPNTIGLVNLSDNIVLSASGALEMEH 155 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 F G +G++S+SG + + + + G+G S + + + D ++ D T+ Sbjct: 156 FPVGGIGVVSQSGGILGALLSRAAARGIGLSKLISTSNE--VDLDLADFVDHLADDADTK 213 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 I + E + E+ A LK KP+V F G++ + A +G G Sbjct: 214 VIALYVESVRNPEKFRAAALKAARAG---KPVVAFKIGRSEAGAK----AAVSHTGALAG 266 Query: 268 AEDKINA-MKEAGICIAPSPARI 289 A+ +A ++ G+ A + + Sbjct: 267 ADRMYDALFRQVGVIRAQTFGDL 289 >gi|197265237|ref|ZP_03165311.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197243492|gb|EDY26112.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 554 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN +++ V A + ++++ + ++ ++ + + D +R+K R Sbjct: 110 SACQKLPEANLALVSVAGEYAAELAEQALDRSLN-VMIFSDNVTLDDEIRLKRRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + ++ ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTAMIANTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE ++ + V + A Q + K KP Sbjct: 226 LGGRDLSAEVGGISALTALEILSADEKSQVLAFVSKPPADA---VRQHIIAAMKATG-KP 281 Query: 239 IVGFVAGKTAPPGR 252 +V G ++P R Sbjct: 282 VVALFLGFSSPVAR 295 >gi|254245291|ref|ZP_04938613.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa 2192] gi|126198669|gb|EAZ62732.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa 2192] Length = 715 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 91/284 (32%), Gaps = 30/284 (10%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 + G + + + ++P + +P F +VAE + + +++ Sbjct: 37 TRIGGRPIAYMLRHGYAGQILPVNPNRA------EIQGLPAFASVAELPQAP--DVAIVA 88 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVR------VKARLEKSSSRLIGPNCPG 131 VP + + + + G + V A + RL+GPN G Sbjct: 89 VPAPQVLETVRALGRQGARSAIVFSSGFSEVGEAGAAMQDAVVAAAREYGMRLLGPNALG 148 Query: 132 ILTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + S+ R G VGI ++SG + Q LG V G + Sbjct: 149 AFNSNLGYYAFFSTSLERGVPLPGRVGIATQSGAYGAHLLGMARQCRLGTPICVATGNEA 208 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 D + + + ++ E + + A KP++ G++ Sbjct: 209 --DVTLGDSIGWLVESPEIDVVMAYAESIRNVDSFLAALEAAHRAG---KPVILHKVGRS 263 Query: 248 APPGRTMGHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARI 289 A R A ++G +DK+ + + + A + + Sbjct: 264 ALGSRAALSHTASLAG-----DDKVLDAVLGDYAVIRARTTEEL 302 >gi|330808837|ref|YP_004353299.1| acid--thiol ligase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376945|gb|AEA68295.1| putative acid--thiol ligase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 704 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 100/276 (36%), Gaps = 30/276 (10%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+ G+ + T + ++PK + G + + +VA+ + V+ Sbjct: 23 GRPGSQAVRALMSNGYTGAIYPVNPKY--ETFEG----LKCYGSVADI--EGDVDLVVVG 74 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR------LEKSSSRLIGPNCPG 131 VP G + S + ++P V ++ G + + R+IGPNC G Sbjct: 75 VPAQGVLAVLESSAQKKVPFAVVLSGGFRESGSEGIFREEKMLVIARAAGMRIIGPNCLG 134 Query: 132 ILTPDSCKIG----IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 S I KGSV ++++SG Y ++ G+G + G + Sbjct: 135 FANIHSRVYAAFGSITREPKLEKGSVSLVTQSGGFGYSIALACAEAGIGFRHVIATGNE- 193 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR-GRKKPIVGFVAGK 246 + ++E L D+ T +IV E + L+ K R KPI+ + G Sbjct: 194 -SDVNTVQLIEALLDDDETHTIVAYIE----GTNDGRALLEIGRKATARGKPILLWKGGV 248 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGIC 281 T A A + G D A K+ GI Sbjct: 249 TEQGAL----AAASHTASMTGVYDFYRALFKQTGIV 280 >gi|331685561|ref|ZP_08386145.1| FdrA [Escherichia coli H299] gi|331077262|gb|EGI48476.1| FdrA [Escherichia coli H299] Length = 519 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 11/182 (6%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 AN ++I VP A I+++ + ++ ++ + + +K + ++G Sbjct: 111 AEPEANLALISVPGDYAAAEAIKALNLGMN-VMMFSDNVSIAQEKSIKTLARERQRIVMG 169 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+C + I + ++ ++G++G++ SGT E + Q G+G S A+G GG Sbjct: 170 PDCGTAIVNG---IPLGFANVVKRGAIGVIGASGTGLQEVTCRIDQLGVGISQALGTGGH 226 Query: 187 P----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + G + L+ D+ T IV++ + A+ + + A+ K +V F Sbjct: 227 DLSEEIGGISMLFALDALAQDDETRVIVLISKPPSPI---VARTILERAEACGKPVVVNF 283 Query: 243 VA 244 + Sbjct: 284 LG 285 >gi|207856007|ref|YP_002242658.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206707810|emb|CAR32095.1| FdrA protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 554 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN +++ V A + ++++ + ++ ++ + + D +R+K R Sbjct: 110 SACQKLPEANLALVSVAGEYAAELAEQALDRSLN-VMIFSDNVTLDDEIRLKRRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + ++ ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTAMIANTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE ++ + V + A Q + K KP Sbjct: 226 LGGRDLSAEVGGISALTALEILSADEKSQVLAFVSKPPADA---VRQHIIAAMKATG-KP 281 Query: 239 IVGFVAGKTAPPGR 252 +V G ++P R Sbjct: 282 VVALFLGFSSPVAR 295 >gi|168465632|ref|ZP_02699514.1| protein FdrA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195631725|gb|EDX50245.1| protein FdrA [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 554 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN +++ V A + ++++ + ++ ++ + + D +R+K R Sbjct: 110 SACQKLPEANLALVSVAGEYAAELAEQALDRSLN-VMIFSDNVTLDDEIRLKRRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + ++ ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTAMIANTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE ++ + V + A Q + K KP Sbjct: 226 LGGRDLSAEVGGISALTALEILSADEKSQVLAFVSKPPADA---VRQHIIAAMKATG-KP 281 Query: 239 IVGFVAGKTAPPGR 252 +V G ++P R Sbjct: 282 VVALFLGFSSPVAR 295 >gi|188994981|ref|YP_001929233.1| acetyl-CoA synthetase [Porphyromonas gingivalis ATCC 33277] gi|188594661|dbj|BAG33636.1| acetyl-CoA synthetase [Porphyromonas gingivalis ATCC 33277] Length = 685 Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 94/278 (33%), Gaps = 18/278 (6%) Query: 25 TEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEA---KERTAANASVIYVPPS 81 Q + +V+ I G N V V K+ + +++ +P Sbjct: 17 ASQDVTKPGGKVLQNILNGSFQGRVLGVNPKVSNVQGVECVPNVKDLPQVDLAILAIPAR 76 Query: 82 GAGDAIIESI-EAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILT 134 I + E I+ + G + ++ ++ + LIGPNC G++ Sbjct: 77 FCPPTIEVLVKEKGTKGIIVFSAGFSEMGAEGKALERQMAELANEAGATLIGPNCVGVMN 136 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 P + P + +S SG + +GL S+ +G G E Sbjct: 137 PLHQSVFTTPVPVLTPKGCDFISGSGATAVFIMESALSKGLSFSSVYSVGNAAQTGVE-- 194 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK-PIVGFVAGKTAPPGRT 253 DVLE + + + +FLK +K I +G ++ GR Sbjct: 195 DVLEHLDETFDAATSSHTLLLYIETISKPKRFLKHARSLVQKGCRIAAIKSGTSSDGGR- 253 Query: 254 MGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARIG 290 A A +G ++ ++A ++AG+ S + Sbjct: 254 ---AAASHTGAMLNSDVAVDALFRKAGVVRCYSREELA 288 >gi|34541020|ref|NP_905499.1| CoA ligase family protein [Porphyromonas gingivalis W83] gi|34397335|gb|AAQ66398.1| CoA ligase family protein [Porphyromonas gingivalis W83] Length = 685 Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 94/278 (33%), Gaps = 18/278 (6%) Query: 25 TEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEA---KERTAANASVIYVPPS 81 Q + +V+ I G N V V K+ + +++ +P Sbjct: 17 ASQDVTKPGGKVLQNILNGSFQGRVLGVNPKVSNVQGVECVPDVKDLPQVDLAILAIPAR 76 Query: 82 GAGDAIIESI-EAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILT 134 I + E I+ + G + ++ ++ + LIGPNC G++ Sbjct: 77 FCPPTIEVLVKEKGTKGIIVFSAGFSEMGAEGKALERQMAELANEAGATLIGPNCVGVMN 136 Query: 135 PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFI 194 P + P + +S SG + +GL S+ +G G E Sbjct: 137 PLHQSVFTTPVPVLTPKGCDFISGSGATAVFIMESALSKGLSFSSVYSVGNAAQTGVE-- 194 Query: 195 DVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKK-PIVGFVAGKTAPPGRT 253 DVLE + + + +FLK +K I +G ++ GR Sbjct: 195 DVLEHLDETFDAATSSHTLLLYIETISKPKRFLKHARSLVQKGCRIAAIKSGTSSDGGR- 253 Query: 254 MGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARIG 290 A A +G ++ ++A ++AG+ S + Sbjct: 254 ---AAASHTGAMLNSDVAVDALFRKAGVVRCYSREELA 288 >gi|157382774|gb|ABV48824.1| ATP citrate lyase alpha subunit [Caminibacter hydrogeniphilus] Length = 334 Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 6/116 (5%) Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 G+ FID + + + ++++GE+GG E + + +K+ KP++G+ G Sbjct: 1 FVGSTFIDHMLRMEKNPKVKYMILLGEVGGREEYKIIEAIKEGKI---TKPVIGWCIGTI 57 Query: 248 AP---PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 A G GHAGA + + AE K AM+EAGI + + + + + L Sbjct: 58 AKHFSSGVQFGHAGASANAEEETAEAKNRAMEEAGIHVPDNFNDLPHVIKGVYEQL 113 >gi|300718029|ref|YP_003742832.1| CoA binding domain/acetyltransferase domain protein [Erwinia billingiae Eb661] gi|299063865|emb|CAX60985.1| CoA binding domain/acetyltransferase domain protein [Erwinia billingiae Eb661] Length = 883 Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 97/278 (34%), Gaps = 23/278 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 +AG + + ++PK G + P ++ + + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPILPVNPK---YQAVCGVLTWPDIASLPLS-----PDLAVLCT 77 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSC 138 S D + E + ++ P + +K + RL+GPN G+L P Sbjct: 78 HASRNLDLLKALGERGCKACIILSA--PASQLDALKQCASEWQIRLLGPNSLGLLAPWQG 135 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 ++G + +S+S ++ + Q LG S + +G + + L+ Sbjct: 136 LNASFSPVPIQQGKLAFISQSAAVSNTILDWAQQRQLGFSWFIALGDSLDIDADDL--LD 193 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D T +I++ E +A +F+ R KPI+ +G++ Sbjct: 194 FLARDGKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRS-----QQAQQL 244 Query: 259 AVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G A D A++ AG+ + ++ L Sbjct: 245 LKTHAGLDAAWD--AAIQRAGLLRVQDTHELFSAVETL 280 >gi|167579035|ref|ZP_02371909.1| acetyltransferase, GNAT family protein [Burkholderia thailandensis TXDOH] Length = 787 Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 107/294 (36%), Gaps = 37/294 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G + V + Sbjct: 13 TSVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKAYPYVDQL 66 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS---S 122 + +++ PP+ + + + + E D ++ L + Sbjct: 67 PSAPS--VALVCTPPATWPGIVRKLGGLGARAAIIVGEARTSADRAALERALAAAKPYLL 124 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 125 RVVGPGSLGVVSPALNAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 184 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D +T +I++ + S A +F+ R KP++ Sbjct: 185 LGGEA--DVDAADVLDYLASDASTRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 238 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G+ G +G ++ A + AG+ + + + L Sbjct: 239 RVGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEIETL 275 >gi|167617147|ref|ZP_02385778.1| acetyltransferase, GNAT family protein [Burkholderia thailandensis Bt4] Length = 779 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 107/294 (36%), Gaps = 37/294 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G + V + Sbjct: 5 TSVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKAYPYVDQL 58 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS---S 122 + +++ PP+ + + + + E D ++ L + Sbjct: 59 PSAPS--VALVCTPPATWPGIVRKLGGLGARAAIIVGEARTSADRAALERALAAAKPYLL 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 117 RVVGPGSLGVVSPALNAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D +T +I++ + S A +F+ R KP++ Sbjct: 177 LGGEA--DVDAADVLDYLASDASTRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 230 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G+ G +G ++ A + AG+ + + + L Sbjct: 231 RVGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEIETL 267 >gi|84501900|ref|ZP_01000058.1| putative acetyl-CoA synthetase [Oceanicola batsensis HTCC2597] gi|84389895|gb|EAQ02529.1| putative acetyl-CoA synthetase [Oceanicola batsensis HTCC2597] Length = 463 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 87/226 (38%), Gaps = 22/226 (9%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSR 123 + V+ P A DA+ + ++V +T G + R++ ++ + R Sbjct: 75 PIDVVVLATPVGAALDALETCTRLNVKVVVGVTSGFSEAGDDGHENEERLRKIMQDAPFR 134 Query: 124 LIGPNCPGILTP--DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 L+GPNC G++ P D + R G V ++S+SG L + + G+G + V Sbjct: 135 LVGPNCEGVVRPASDLQLTFSPMFNGLRPGPVAMISQSGALAGLMALRLGERGVGINAIV 194 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE--EEAAQFLKDEAKRGRKKPI 239 G + +L+ F D T ++ E EAAQ L K + Sbjct: 195 SSGNE--TDLTAAHLLDYFGNDPQTRVVLCYVEELRDGRRFAEAAQRLTRAG-----KHV 247 Query: 240 VGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAP 284 V G++ R + H GA+ + + +E G+ A Sbjct: 248 VAVKGGRSRAGSRAVQSHTGAMAGDDRVIS----AVFRETGVIRAR 289 >gi|319794555|ref|YP_004156195.1| CoA-binding domain protein [Variovorax paradoxus EPS] gi|315597018|gb|ADU38084.1| CoA-binding domain protein [Variovorax paradoxus EPS] Length = 706 Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 97/263 (36%), Gaps = 23/263 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P GG + P V E + ++ + A +A+ E Sbjct: 47 FAGAIYPVNPRADVIGGLKSYP---DVQSLPEAP--DVGIVLLGAERAHEAVRELAARGT 101 Query: 96 PLIVCITEGIPVLDMVRVKARLE----KSSSRLIGPNCPGILT----PDSCKIGIMPGSI 147 + + G + + + + R++GPN G++ G + Sbjct: 102 AAAIVLASGYTEVGAEGARRQQQLLEAAGGMRILGPNTIGLVNLTDRITLSATGALEMQD 161 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 F GS+G++S+SG + + + + G+G S + + + D ++ DEAT Sbjct: 162 FEAGSIGVVSQSGGILGALLSRAAARGIGLSKLISTSNEA--DLDMADFIDHLADDEATS 219 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 I + E + + A + KP+V F G++ A +G G Sbjct: 220 VIALYMEGVRNPAKFKAAA---LKAARKGKPVVVFKVGRSESGA----AAAVSHTGALAG 272 Query: 268 AEDKINA-MKEAGICIAPSPARI 289 A+ +A +E GI A + + + Sbjct: 273 ADRMYDALFREVGIVRAQTFSDL 295 >gi|257141033|ref|ZP_05589295.1| acetyltransferase [Burkholderia thailandensis E264] Length = 779 Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 107/294 (36%), Gaps = 37/294 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G + V + Sbjct: 5 TSVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKAYPYVDQL 58 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS---S 122 + +++ PP+ + + + + E D ++ L + Sbjct: 59 PSAPS--VALVCTPPATWPGIVRKLGGLGARAAIIVGEARTSADRAALERALAAAKPYLL 116 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 117 RVVGPGSLGVVSPALNAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 176 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D +T +I++ + S A +F+ R KP++ Sbjct: 177 LGGEA--DVDAADVLDYLASDASTRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 230 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G+ G +G ++ A + AG+ + + + L Sbjct: 231 RVGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEIETL 267 >gi|289524303|ref|ZP_06441157.1| protein FdrA [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502475|gb|EFD23639.1| protein FdrA [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 508 Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 11/182 (6%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPN 128 AN ++I + AGD +E + + ++ ++ + + + +K ++ ++GP+ Sbjct: 112 PEANLALISIAGQYAGDEAMECLNKGLH-VMLYSDNVSLEKEIELKNIAKEKGLLVMGPD 170 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 C + IG+ + G VG+++ +GT E Q + G+G A+G GG V Sbjct: 171 CGTAVIKG---IGLGFANACPVGPVGMVAAAGTGLQEVHVQLAHRGIGVLHAIGTGGRDV 227 Query: 189 K----GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 K G + +E L + + IVMVG+ + E + + G K ++G++ Sbjct: 228 KEAVGGITSLMGIEALLESDDVKVIVMVGKPPAAEVE---KKIFQRLASGNKPAVLGYIG 284 Query: 245 GK 246 G+ Sbjct: 285 GE 286 >gi|325569046|ref|ZP_08145293.1| hypothetical protein HMPREF9087_1582 [Enterococcus casseliflavus ATCC 12755] gi|325157504|gb|EGC69662.1| hypothetical protein HMPREF9087_1582 [Enterococcus casseliflavus ATCC 12755] Length = 584 Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 85/212 (40%), Gaps = 15/212 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC 129 A +V+ +P + A I ++ A + C ++ + + + VR+K + L+GP+C Sbjct: 113 DAKVAVLSIPGTMAAPEIETALAAG-KHVFCFSDNVSLEEEVRLKKLAHEKGLLLMGPDC 171 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP-- 187 + + I + + RKG +G++ SGT E + G + A+G GG Sbjct: 172 GTGILNE---IPVAFTNAVRKGKIGVVGASGTGIQEVTTIIHKLAAGVTQAIGTGGRDLK 228 Query: 188 --VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 V G D + D TE IV++ + + +RG K + F+ Sbjct: 229 EAVGGITMKDSILALEHDPDTEVIVVISKPPAP---RVRDEVLALLRRGTKPAVTIFLGE 285 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKE 277 + + A + + A+ + +++ Sbjct: 286 EPTDHEENLYRAYTL----EEAAQLAVQLLRQ 313 >gi|224537463|ref|ZP_03678002.1| hypothetical protein BACCELL_02342 [Bacteroides cellulosilyticus DSM 14838] gi|224520901|gb|EEF90006.1| hypothetical protein BACCELL_02342 [Bacteroides cellulosilyticus DSM 14838] Length = 687 Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 97/276 (35%), Gaps = 36/276 (13%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 I T + ++PK V + V + +++ +P DA+ Sbjct: 33 INGGYTGELRAVNPK------ETEVQGVTAYADVKDI---PDTELAILAIPAQMCPDAVE 83 Query: 89 E-SIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIG 141 + E ++ + ++ G R+ + K + LIGPNC G++ + Sbjct: 84 VLAAEKQVRAFIILSAGFGEETHEGALLEDRILETVNKYGASLIGPNCIGLMNTWHHSVF 143 Query: 142 IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL-- 199 P V ++S SG + +GL ++ +G G E DVL+ Sbjct: 144 SQPIPQLHPQGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQYMD 201 Query: 200 --FLADEATESIVMVGEIGGSAEE---EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM 254 F AD+ ++ ++ E G + A+ +K K K A + Sbjct: 202 ENFQADKDSKIKLLYIESIGDPDRLLFHASSLIKKGCKIAAIK----------AGSSESG 251 Query: 255 GHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 A + +G ++ + A ++AGI S + Sbjct: 252 SRAASSHTGAIASSDSAVEALFRKAGIVRCYSREEL 287 >gi|83716704|ref|YP_440394.1| acetyltransferase [Burkholderia thailandensis E264] gi|83650529|gb|ABC34593.1| acetyltransferase, GNAT family [Burkholderia thailandensis E264] Length = 836 Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 107/294 (36%), Gaps = 37/294 (12%) Query: 9 TKVLVQGLTGKAGTFHTE-QAILYCQTQVVG--GIHPKKGSTYWTGGNVNVPVFTTVAEA 65 T V V G + + G+ A + ++PK G + V + Sbjct: 62 TSVAVVGASPRPGSVGAMVWACVLDGRFGGAIWPVNPK------YGELNGHKAYPYVDQL 115 Query: 66 KERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSS---S 122 + +++ PP+ + + + + E D ++ L + Sbjct: 116 PSAPS--VALVCTPPATWPGIVRKLGGLGARAAIIVGEARTSADRAALERALAAAKPYLL 173 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 R++GP G+++P P I + G V +S+S LT + GLG S AV Sbjct: 174 RVVGPGSLGVVSPALNAHFGAPACIVKAGGVAWVSQSNALTNAVLGWAHARGLGFSHAVA 233 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 +GG+ + DVL+ +D +T +I++ + S A +F+ R KP++ Sbjct: 234 LGGEA--DVDAADVLDYLASDASTRAILLELDTVKS----ARKFMSAARAAARNKPVLAL 287 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G+ G +G ++ A + AG+ + + + L Sbjct: 288 RVGR--------GDSGDLL---------YTAAFQRAGMVRVDALDDLLDEIETL 324 >gi|193067555|ref|ZP_03048522.1| bacterial FdrA protein [Escherichia coli E110019] gi|260853734|ref|YP_003227625.1| putative acyl-CoA synthetase [Escherichia coli O26:H11 str. 11368] gi|260866674|ref|YP_003233076.1| putative acyl-CoA synthetase [Escherichia coli O111:H- str. 11128] gi|300925791|ref|ZP_07141647.1| membrane protein FdrA [Escherichia coli MS 182-1] gi|301327836|ref|ZP_07221026.1| membrane protein FdrA [Escherichia coli MS 78-1] gi|192958967|gb|EDV89403.1| bacterial FdrA protein [Escherichia coli E110019] gi|257752383|dbj|BAI23885.1| predicted acyl-CoA synthetase [Escherichia coli O26:H11 str. 11368] gi|257763030|dbj|BAI34525.1| predicted acyl-CoA synthetase [Escherichia coli O111:H- str. 11128] gi|300418117|gb|EFK01428.1| membrane protein FdrA [Escherichia coli MS 182-1] gi|300845639|gb|EFK73399.1| membrane protein FdrA [Escherichia coli MS 78-1] gi|323153422|gb|EFZ39677.1| protein fdrA [Escherichia coli EPECa14] gi|323178209|gb|EFZ63787.1| protein fdrA [Escherichia coli 1180] Length = 555 Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDANLALISVAGEYAAELTNQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|168261029|ref|ZP_02683002.1| protein FdrA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350061|gb|EDZ36692.1| protein FdrA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 554 Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN +++ V A + ++++ + ++ ++ + + D +R+K R Sbjct: 110 SACQKLPEANLALVSVAGEYAAELAEQALDRSLN-VMIFSDNVTLYDEIRLKRRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + ++ ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTAMIANTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + L++ ADE ++ + V + A Q + K KP Sbjct: 226 LGGRDLSAEVGGISALTALDILSADEKSQVLAFVSKPPADA---VRQHIIAAMKATG-KP 281 Query: 239 IVGFVAGKTAPPGR 252 +V G ++P R Sbjct: 282 VVALFLGFSSPVAR 295 >gi|62179138|ref|YP_215555.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224582366|ref|YP_002636164.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62126771|gb|AAX64474.1| putative acyl-CoA synthetase, involved in protein transport [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224466893|gb|ACN44723.1| succinyl-CoA synthetase alpha subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322713600|gb|EFZ05171.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 554 Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN +++ V A + ++++ + ++ ++ + + D +R+K R Sbjct: 110 SACQKLPEANLALVSVAGEYAAELAEQALDRSLN-VMIFSDNVTLDDEIRLKRRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + ++ ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTAMIANTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + L++ ADE ++ + V + A Q + K KP Sbjct: 226 LGGRDLSAEVGGISALTALDILSADEKSQVLAFVSKPPADA---VRQHIIAAMKATG-KP 281 Query: 239 IVGFVAGKTAPPGR 252 +V G ++P R Sbjct: 282 VVALFLGFSSPVAR 295 >gi|73537703|ref|YP_298070.1| CoA-binding [Ralstonia eutropha JMP134] gi|72121040|gb|AAZ63226.1| CoA-binding [Ralstonia eutropha JMP134] Length = 711 Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 86/262 (32%), Gaps = 30/262 (11%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P + P +V + KE + +++ V + + E I Sbjct: 52 LVNPGR------TEIHGRPCVASVKDLKEAP--DLAILAVRADMVIQTLRDCGEMGIKFA 103 Query: 99 VCITEGIPVLDM------VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGS----IF 148 + T G ++ + + R+ GPNCPG+ ++ ++G+ Sbjct: 104 IVFTSGFGETGEDGRAVEAEMREIVASTGMRIYGPNCPGLNNMNA-RLGLTFSPAWRIDR 162 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 R G +G+ ++ G L + Q G+G G + E D + E Sbjct: 163 RPGPIGVATQGGGLGRSFI-QAMDRGVGVGLWCSGGNE--VDLEVSDYIHYMADAPDIEV 219 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGG 267 IV E + A L + KPIV GK+ + H A+ G Sbjct: 220 IVTTLEGVRNGPRFMAAALHAARRG---KPIVAIKVGKSEYGAKAAQSHTAAIA----GS 272 Query: 268 AEDKINAMKEAGICIAPSPARI 289 AE + GI + Sbjct: 273 AEINSAVFSQLGIIEVDDIDEL 294 >gi|197248096|ref|YP_002145512.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197211799|gb|ACH49196.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 554 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN +++ V A + ++++ + ++ ++ + + D +R+K R Sbjct: 110 SACQKLPEANLALVSVAGEYAAELAEQALDRSLN-VMIFSDNVTLDDEIRLKRRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + ++ ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTAMIANTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + L++ ADE ++ + V + A Q + K KP Sbjct: 226 LGGRDLSAEVGGISALTALDILSADEKSQVLAFVSKPPADA---VRQHIIAAMKATG-KP 281 Query: 239 IVGFVAGKTAPPGR 252 +V G ++P R Sbjct: 282 VVALFLGFSSPVAR 295 >gi|198243025|ref|YP_002214484.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197937541|gb|ACH74874.1| protein FdrA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326622232|gb|EGE28577.1| protein FdrA [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 554 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN +++ V A + ++++ + ++ ++ + + D +R+K R Sbjct: 110 SACQKLPEANLALVSVAGEYAAELADQALDRSLN-VMIFSDNVTLDDEIRLKRRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + ++ ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTAMIANTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE ++ + V + A Q + K KP Sbjct: 226 LGGRDLSAEVGGISALTALEILSADEKSQVLAFVSKPPADA---VRQHIIAAMKATG-KP 281 Query: 239 IVGFVAGKTAPPGR 252 +V G ++P R Sbjct: 282 VVALFLGFSSPVAR 295 >gi|161615266|ref|YP_001589231.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161364630|gb|ABX68398.1| hypothetical protein SPAB_03035 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 554 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN +++ V A + ++++ + ++ ++ + + D +R+K R Sbjct: 110 SACQKLPEANLALVSVAGEYAAELAEQALDRSLN-VMIFSDNVTLDDEIRLKRRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + ++ ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTAMIANTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + L++ ADE ++ + V + A Q + K KP Sbjct: 226 LGGRDLSAEVGGISALTALDILSADEKSQVLAFVSKPPADA---VRQHIIAAMKATG-KP 281 Query: 239 IVGFVAGKTAPPGR 252 +V G ++P R Sbjct: 282 VVALFLGFSSPVAR 295 >gi|332286780|ref|YP_004418691.1| hypothetical protein PT7_3527 [Pusillimonas sp. T7-7] gi|330430733|gb|AEC22067.1| hypothetical protein PT7_3527 [Pusillimonas sp. T7-7] Length = 822 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 83/229 (36%), Gaps = 27/229 (11%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI-----PVLDMVRVKARLEKSSSRLIG 126 + +V+ V P ++ +E++ P + + P+ DMV ++ + + ++G Sbjct: 63 DLAVVCVGPDRLPES-LEALRPHRPRGLILLPHEHASDNPLEDMVYCRSWGKLNDCTVLG 121 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P G+ P + G V ++++S ++T + LG S V +G + Sbjct: 122 PRSFGVQRPHLGLNFSLQPKTALSGRVALVAQSRSITAAVLDWAEDINLGFSAVVSLGDE 181 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 V DVL+ D T+SI + E S+ +F KP+V G Sbjct: 182 SVVDV--ADVLDYLSMDARTDSIALYLEETSSS----RRFSSALRAAASVKPVVVLKVGY 235 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARIGRSLV 294 + + NA ++ AG ++ +L Sbjct: 236 G--------------TEQTSAQDAVFNALLRRAGAVRIRYFVQLFSALK 270 >gi|26250586|ref|NP_756626.1| hypothetical protein c4767 [Escherichia coli CFT073] gi|227888568|ref|ZP_04006373.1| YahF/FdrA family protein [Escherichia coli 83972] gi|300985636|ref|ZP_07177523.1| bacterial FdrA protein [Escherichia coli MS 45-1] gi|301047271|ref|ZP_07194357.1| bacterial FdrA protein [Escherichia coli MS 185-1] gi|331660190|ref|ZP_08361126.1| FdrA [Escherichia coli TA206] gi|26111016|gb|AAN83200.1|AE016769_315 Hypothetical protein yahF [Escherichia coli CFT073] gi|222035541|emb|CAP78286.1| hypothetical protein LF82_593 [Escherichia coli LF82] gi|227834407|gb|EEJ44873.1| YahF/FdrA family protein [Escherichia coli 83972] gi|300300790|gb|EFJ57175.1| bacterial FdrA protein [Escherichia coli MS 185-1] gi|300408020|gb|EFJ91558.1| bacterial FdrA protein [Escherichia coli MS 45-1] gi|307555969|gb|ADN48744.1| YahF/FdrA-like protein [Escherichia coli ABU 83972] gi|312948396|gb|ADR29223.1| YahF/FdrA-like protein [Escherichia coli O83:H1 str. NRG 857C] gi|315293176|gb|EFU52528.1| bacterial FdrA protein [Escherichia coli MS 153-1] gi|320197650|gb|EFW72262.1| Protein fdrA [Escherichia coli WV_060327] gi|331052758|gb|EGI24793.1| FdrA [Escherichia coli TA206] Length = 519 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 79/182 (43%), Gaps = 11/182 (6%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 AN ++I VP A ++++ + ++ ++ + + +K + ++G Sbjct: 111 AEPEANLALISVPGDYAAAEAMKALNLGMN-VMMFSDNVSIGQEKSIKTLARERQRIVMG 169 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+C + I + ++ ++G++G++ SGT E + Q G G S A+G GG Sbjct: 170 PDCGTAIVNG---IPLGFANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGH 226 Query: 187 P----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + G + L+ D+ T IV++ + A+ + + A+ K +V F Sbjct: 227 DLSEEIGGISMLFALDALAQDDETRVIVLISKPPSPI---VARTILERAEACGKPVVVNF 283 Query: 243 VA 244 + Sbjct: 284 LG 285 >gi|300820236|ref|ZP_07100388.1| membrane protein FdrA [Escherichia coli MS 119-7] gi|300527021|gb|EFK48090.1| membrane protein FdrA [Escherichia coli MS 119-7] Length = 555 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ + AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLSDANLALISVAGEYAAELTNQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 +V G T R Sbjct: 282 MVALFLGYTPAVAR 295 >gi|170025560|ref|YP_001722065.1| GCN5-related N-acetyltransferase [Yersinia pseudotuberculosis YPIII] gi|186894219|ref|YP_001871331.1| GCN5-related N-acetyltransferase [Yersinia pseudotuberculosis PB1/+] gi|169752094|gb|ACA69612.1| GCN5-related N-acetyltransferase [Yersinia pseudotuberculosis YPIII] gi|186697245|gb|ACC87874.1| GCN5-related N-acetyltransferase [Yersinia pseudotuberculosis PB1/+] Length = 880 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 96/281 (34%), Gaps = 29/281 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHP-KKG--STYWTGGNVNVPVFTTVAEAKERTAANASV 75 +AG + + + P K ++P+ +A N ++ Sbjct: 26 RAGFLMMRNLLDGGFNGPILPVTPNHKAVCGVLAYANIASLPITPDLAILCTHDCRNLTL 85 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + + + ++ + KA ++ RL+GPN G+L P Sbjct: 86 L-----------EDLGNRGCKAAIILSAAPEQFPEL--KACAQRHHMRLLGPNSLGLLAP 132 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 +KG + +S+S + + Q +G S + +G + + Sbjct: 133 WQGLNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIALGDSLDIDVDDL- 191 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 L+ D T +I++ E +A +FL R KP++ +G++ Sbjct: 192 -LDFLARDSKTSAIMLYIEHIS----DARRFLSASRSASRNKPVLVVKSGRSQ------- 239 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A +++G +G A++ AG+ + ++ L Sbjct: 240 RAQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|121607820|ref|YP_995627.1| CoA-binding domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121552460|gb|ABM56609.1| CoA-binding domain protein [Verminephrobacter eiseniae EF01-2] Length = 766 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 89/282 (31%), Gaps = 28/282 (9%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 KAG Y + ++P++ +P + ++A+ + + VI + Sbjct: 27 KAGGRPIAYMRRYGFQDDIYPVNPRR------TEVQGLPCYASLADLPQAP--DLVVISL 78 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV------KARLEKSSSRLIGPNCPGI 132 S A+ + I A V + G L + R + RLIGPN G+ Sbjct: 79 AGSQVDAALAQCIAAGARCAVIYSSGFAELGAAGLAAQQALVRRASAAGLRLIGPNTQGV 138 Query: 133 --LTPDSCKIGIMPGSIFRK--GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 + + G++ I+S+SG ++GLG V G + Sbjct: 139 ANFQTGAVLNFSTMINECAPQDGAIAIVSQSGAGAGILYGGLRRQGLGVRYMVATGNEA- 197 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK-T 247 G + L D + I+M E A R PI+ A + Sbjct: 198 -GVNVARAVRGLLEDPSLRLILMYAEALRDTGLLAEAATLSAR---RDVPILAVKAARTP 253 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 A H GA+ S +++ I + Sbjct: 254 AGQATASSHTGALASEDALAE----AFLRQHNIVRVRDFDEL 291 >gi|322831033|ref|YP_004211060.1| membrane protein FdrA [Rahnella sp. Y9602] gi|321166234|gb|ADW71933.1| membrane protein FdrA [Rahnella sp. Y9602] Length = 555 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 101/252 (40%), Gaps = 18/252 (7%) Query: 52 GNVNVPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM 110 G ++PV + A++R AN +I + A +++++ ++ ++ + + D Sbjct: 98 GGRSLPVARRFSSAEQRLPDANLMLISIAGEYAAGLAHQALDSG-RNVMIFSDNVTLEDE 156 Query: 111 VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 + +K + + ++GP+C + + ++ +G +G+ SGT E Q Sbjct: 157 IALKQKACEKGLLVMGPDCGTAIIAGAPLA---FANVLPQGVIGVTGASGTGIQELTSQI 213 Query: 171 SQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + G G S A+G+GG V G + L++ D ++ + V + +A + Sbjct: 214 ALNGQGISQAIGLGGRDLSAQVGGISALTSLKMLAEDPQSQVLAFVSKPPA----DAVRL 269 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPS- 285 A + +KP+V G R G V +I + + +A S Sbjct: 270 KVMAAMKAIRKPVVALFLGAPVSQARD----GNVWLASTLDEAARIACLLARVVQVAASQ 325 Query: 286 PARIGRSLVELL 297 P G+ + L Sbjct: 326 PDVTGKKIAGLF 337 >gi|149364887|ref|ZP_01886922.1| putative acetyltransferase [Yersinia pestis CA88-4125] gi|165926586|ref|ZP_02222418.1| putative acyl-CoA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165935875|ref|ZP_02224445.1| putative acyl-CoA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|166011098|ref|ZP_02231996.1| putative acyl-CoA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|167421478|ref|ZP_02313231.1| putative acyl-CoA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167469726|ref|ZP_02334430.1| putative acetyltransferase [Yersinia pestis FV-1] gi|218930297|ref|YP_002348172.1| putative acetyltransferase [Yersinia pestis CO92] gi|229838885|ref|ZP_04459044.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and ATP-binding subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229899454|ref|ZP_04514597.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and ATP-binding subunit [Yersinia pestis biovar Orientalis str. India 195] gi|294504986|ref|YP_003569048.1| putative acetyltransferase [Yersinia pestis Z176003] gi|115348908|emb|CAL21865.1| putative acetyltransferase [Yersinia pestis CO92] gi|149291300|gb|EDM41374.1| putative acetyltransferase [Yersinia pestis CA88-4125] gi|165916020|gb|EDR34627.1| putative acyl-CoA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|165921514|gb|EDR38711.1| putative acyl-CoA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165990098|gb|EDR42399.1| putative acyl-CoA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166960397|gb|EDR56418.1| putative acyl-CoA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|229687856|gb|EEO79929.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and ATP-binding subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229695251|gb|EEO85298.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and ATP-binding subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|262363050|gb|ACY59771.1| putative acetyltransferase [Yersinia pestis D106004] gi|262366975|gb|ACY63532.1| putative acetyltransferase [Yersinia pestis D182038] gi|294355445|gb|ADE65786.1| putative acetyltransferase [Yersinia pestis Z176003] Length = 880 Score = 78.9 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 96/281 (34%), Gaps = 29/281 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHP-KKG--STYWTGGNVNVPVFTTVAEAKERTAANASV 75 +AG + + + P K ++P+ +A N ++ Sbjct: 26 RAGFLMMRNLLDGGFNGPILPVTPNHKAVCGVLAYANIASLPITPDLAILCTHDCRNLTL 85 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + + + ++ + KA ++ RL+GPN G+L P Sbjct: 86 L-----------EDLGNRGCKAAIILSAAPEQFPEL--KACAQRHHMRLLGPNSLGLLAP 132 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 +KG + +S+S + + Q +G S + +G + + Sbjct: 133 WQGLNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIALGDSLDIDVDDL- 191 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 L+ D T +I++ E +A +FL R KP++ +G++ Sbjct: 192 -LDFLARDSKTSAIMLYIEHIS----DARRFLSASRSASRNKPVLVVKSGRSQ------- 239 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A +++G +G A++ AG+ + ++ L Sbjct: 240 RAQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|22124825|ref|NP_668248.1| hypothetical protein y0917 [Yersinia pestis KIM 10] gi|45440510|ref|NP_992049.1| Acyl-CoA synthetase (NDP forming) [Yersinia pestis biovar Microtus str. 91001] gi|108808754|ref|YP_652670.1| putative acetyltransferase [Yersinia pestis Antiqua] gi|108810989|ref|YP_646756.1| acetyltransferase [Yersinia pestis Nepal516] gi|145600167|ref|YP_001164243.1| acetyltransferase [Yersinia pestis Pestoides F] gi|153947999|ref|YP_001402166.1| acyl-CoA synthetase [Yersinia pseudotuberculosis IP 31758] gi|162419869|ref|YP_001607800.1| putative acyl-CoA synthetase [Yersinia pestis Angola] gi|166212989|ref|ZP_02239024.1| putative acyl-CoA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|167399349|ref|ZP_02304873.1| putative acyl-CoA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167423733|ref|ZP_02315486.1| putative acyl-CoA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229896378|ref|ZP_04511547.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and ATP-binding subunit [Yersinia pestis Pestoides A] gi|229901207|ref|ZP_04516329.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and ATP-binding subunit [Yersinia pestis Nepal516] gi|21957653|gb|AAM84499.1|AE013695_1 hypothetical protein y0917 [Yersinia pestis KIM 10] gi|45435367|gb|AAS60926.1| Acyl-CoA synthetase (NDP forming) [Yersinia pestis biovar Microtus str. 91001] gi|108774637|gb|ABG17156.1| acetyltransferase [Yersinia pestis Nepal516] gi|108780667|gb|ABG14725.1| putative acetyltransferase [Yersinia pestis Antiqua] gi|145211863|gb|ABP41270.1| acetyltransferase [Yersinia pestis Pestoides F] gi|152959494|gb|ABS46955.1| putative acyl-CoA synthetase [Yersinia pseudotuberculosis IP 31758] gi|162352684|gb|ABX86632.1| putative acyl-CoA synthetase [Yersinia pestis Angola] gi|166205776|gb|EDR50256.1| putative acyl-CoA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|167051853|gb|EDR63261.1| putative acyl-CoA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057903|gb|EDR67649.1| putative acyl-CoA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681136|gb|EEO77230.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and ATP-binding subunit [Yersinia pestis Nepal516] gi|229700654|gb|EEO88684.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and ATP-binding subunit [Yersinia pestis Pestoides A] gi|320016463|gb|ADW00035.1| putative acyl-CoA synthetase: NAD(P)-binding subunit and ATP-binding subunit [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 880 Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 96/281 (34%), Gaps = 29/281 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHP-KKG--STYWTGGNVNVPVFTTVAEAKERTAANASV 75 +AG + + + P K ++P+ +A N ++ Sbjct: 26 RAGFLMMRNLLDGGFNGPILPVTPNHKAVCGVLAYANIASLPITPDLAILCTHDCRNLTL 85 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + + + ++ + KA ++ RL+GPN G+L P Sbjct: 86 L-----------EDLGNRGCKAAIILSAAPEQFPEL--KACAQRHHMRLLGPNSLGLLAP 132 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 +KG + +S+S + + Q +G S + +G + + Sbjct: 133 WQGLNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIALGDSLDIDVDDL- 191 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 L+ D T +I++ E +A +FL R KP++ +G++ Sbjct: 192 -LDFLARDSKTSAIMLYIEHIS----DARRFLSASRSASRNKPVLVVKSGRSQ------- 239 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A +++G +G A++ AG+ + ++ L Sbjct: 240 RAQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|329962346|ref|ZP_08300351.1| CoA binding domain protein [Bacteroides fluxus YIT 12057] gi|328530207|gb|EGF57088.1| CoA binding domain protein [Bacteroides fluxus YIT 12057] Length = 687 Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 93/267 (34%), Gaps = 36/267 (13%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE-SIEAEIP 96 ++PK VP F V + + +++ +P + DA+ + E ++ Sbjct: 42 RAVNPK------ETDVQGVPAFADVKDI---PDTDLAILAIPAALCPDAVEVLAAEKQVR 92 Query: 97 LIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + ++ G R+ + K + LIGPNC G+L + P Sbjct: 93 AFIILSAGFGEETHEGALLEERILETVNKYGASLIGPNCIGLLNTSHHSVFSQPIPNLHP 152 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLAD----EAT 206 V ++S SG + +GL ++ +G G E DVL+ + Sbjct: 153 QGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQYMDEHFNLETDS 210 Query: 207 ESIVMVGEIGGSAEE---EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISG 263 + ++ E G + A+ +K K K A + A + +G Sbjct: 211 KIKLLYIESIGDPDRLLFHASSLIKKGCKIAAIK----------AGSSESGSRAASSHTG 260 Query: 264 GKGGAEDKINA-MKEAGICIAPSPARI 289 ++ + A ++AGI S + Sbjct: 261 AIASSDSAVEALFRKAGIVRCYSREEL 287 >gi|306815119|ref|ZP_07449272.1| Putative enzyme, Putative Succinyl-CoA synthetase, alpha subunit [Escherichia coli NC101] gi|305851488|gb|EFM51942.1| Putative enzyme, Putative Succinyl-CoA synthetase, alpha subunit [Escherichia coli NC101] Length = 519 Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 79/182 (43%), Gaps = 11/182 (6%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 AN ++I VP A ++++ + ++ ++ + + +K + ++G Sbjct: 111 AEPEANLALISVPGDYAAAEAMKALNLGMN-VMMFSDNVSIGQEKSIKTLARERQRIVMG 169 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+C + I + ++ ++G++G++ SGT E + Q G G S A+G GG Sbjct: 170 PDCGTAIVNG---IPLGFANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGH 226 Query: 187 P----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + G + L+ D+ T IV++ + A+ + + A+ K +V F Sbjct: 227 DLSEEIGGISMLFALDALAQDDETRVIVLISKPPSPI---VARTILERAEACGKPVVVNF 283 Query: 243 VA 244 + Sbjct: 284 LG 285 >gi|116694312|ref|YP_728523.1| Acyl-CoA synthetase [Ralstonia eutropha H16] gi|113528811|emb|CAJ95158.1| Acyl-CoA synthetase [Ralstonia eutropha H16] Length = 721 Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 88/262 (33%), Gaps = 29/262 (11%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P + P + +V + + +++ V DA+ E E + Sbjct: 56 LVNPGRK------EISGRPCYPSVRDLDAVP--DLAIVAVRADMVLDALRECGECGVKFA 107 Query: 99 VCITEGIPVLDMVRVKARLE------KSSSRLIGPNCPGILTPDSCKIGIMPGS-----I 147 + T G A E K+ R+ GPNCPG+ ++ ++G+ Sbjct: 108 IVFTSGFGETGEEGRAAEAEMRAIVAKTGMRIYGPNCPGLNNMNA-RLGMTFSPAWRIDN 166 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 R G +G+ ++ G L + Q+ G+G G + E D + + Sbjct: 167 ARPGPIGVATQGGGLGRSFI-QSMDRGVGIGLWCSGGNEA--DLEVSDYIHYMADAPDIK 223 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 IV E + A L + KPIV GK+ + + + G Sbjct: 224 VIVTTLEGVRNGPRFMAAALHSARRG---KPIVALKVGKSEIGAKAA---ASHTAAIAGV 277 Query: 268 AEDKINAMKEAGICIAPSPARI 289 AE ++ GI + Sbjct: 278 AEINSAVFRQLGIIEVDDIDEL 299 >gi|309700780|emb|CBJ00076.1| FdrA protein [Escherichia coli ETEC H10407] gi|323938467|gb|EGB34718.1| bacterial FdrA protein [Escherichia coli E1520] Length = 555 Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|238911341|ref|ZP_04655178.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 554 Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN +++ V A + ++++ + ++ ++ + + D +R+K R Sbjct: 110 SACQKLPEANLALVSVAGEYAAELAEQALDRSLN-VMIFSDNVTLDDEIRLKRRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + ++ ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTAMIANTPLA---FANVIPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + L++ ADE ++ + V + A Q + K KP Sbjct: 226 LGGRDLSAEVGGISALTALDILSADEKSQVLAFVSKPPADA---VRQHIIAAMKATG-KP 281 Query: 239 IVGFVAGKTAPPGR 252 +V G ++P R Sbjct: 282 VVALFLGFSSPVAR 295 >gi|168818849|ref|ZP_02830849.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344043|gb|EDZ30807.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320084804|emb|CBY94594.1| Protein fdrA [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 554 Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN +++ V A + ++++ + ++ ++ + + D +R+K R Sbjct: 110 SACQKLPEANLALVSVAGEYAAELAEQALDRSLN-VMIFSDNVTLDDEIRLKRRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + ++ ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTAMIANTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + L++ ADE ++ + V + A Q + K KP Sbjct: 226 LGGRDLSAEVGGISALTALDILSADEKSQVLAFVSKPPADA---VRQHIISAMKATG-KP 281 Query: 239 IVGFVAGKTAPPGR 252 +V G ++P R Sbjct: 282 VVALFLGFSSPVAR 295 >gi|330822873|ref|YP_004386176.1| CoA-binding domain-containing protein [Alicycliphilus denitrificans K601] gi|329308245|gb|AEB82660.1| CoA-binding domain protein [Alicycliphilus denitrificans K601] Length = 691 Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 88/261 (33%), Gaps = 23/261 (8%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 +T G I+P G P ++ E + + P A+ E Sbjct: 41 RTGFAGRIYPINPRRDEIQGLKAWPSLQSLPEV-----PDQVFVLTPTETVIPAVRECAA 95 Query: 93 AEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCK----IGI 142 + ++ + G ++ +++ R++GP+ G++ P + Sbjct: 96 LGVKVVTILASGFSESGAEGAAREGELRRIAKETGIRILGPSSLGVVNPRTGLVLTANAA 155 Query: 143 MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA 202 G V + S SG++ V + G+G + V +G + ++ L Sbjct: 156 FAEPDLPPGKVFVASHSGSMIGALVSRGKARGVGFAGLVSVGSE--VDLNVGEICAATLD 213 Query: 203 DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 D A E ++ E E A A+ KP++ + G++A I+ Sbjct: 214 DPAIEGYLLFLESLRHGPELRAFARAAHARG---KPVIAYKLGRSAAAAEMATTHTGAIA 270 Query: 263 GGKGGAEDKINAMKEAGICIA 283 G AE +K+ G+ Sbjct: 271 GEDDIAE---AFLKDMGVARV 288 >gi|167550940|ref|ZP_02344696.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205324292|gb|EDZ12131.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 554 Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN +++ V A + ++++ + ++ ++ + + D +R+K R Sbjct: 110 SACQKLPEANLALVSVAGEYAAELAEQALDRSLN-VMIFSDNVTLDDEIRLKRRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + ++ ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTAMIANTPLA---FANVIPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + L++ ADE ++ + V + A Q + K KP Sbjct: 226 LGGRDLSAEVGGISALTALDILSADEKSQVLAFVSKPPADA---VRQHIIAAMKATG-KP 281 Query: 239 IVGFVAGKTAPPGR 252 +V G ++P R Sbjct: 282 VVALFLGFSSPVAR 295 >gi|163859039|ref|YP_001633337.1| acetyl-CoA synthetase [Bordetella petrii DSM 12804] gi|163262767|emb|CAP45070.1| acetyl-CoA synthetase [Bordetella petrii] Length = 701 Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 95/263 (36%), Gaps = 23/263 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P G P ++ EA + +++ + A+ + Sbjct: 38 FQGRVYPVNPKASDIDGLRCYPDAQSLPEA-----PDVAIVLLGAERTQQAVRDLAAIGT 92 Query: 96 PLIVCITEGIPVLDMVRVKARLE----KSSSRLIGPNCPGILTPDSCKI----GIMPGSI 147 + + G + + E S R++GPN G++ I G + Sbjct: 93 GAAIVLASGYSETGEGGARRQRELLEAAGSMRILGPNTIGLVNLTDRIILSASGALEVDQ 152 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 G++G++S+SG + + + G+G S + + + D ++ D AT Sbjct: 153 LHSGAIGLVSQSGGILGALLSRAVARGIGFSKLISTSNE--VDLDLADFVDALADDPATR 210 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 I + E + A K KPIV F G++ A A +G G Sbjct: 211 VIALYVETIRNPRAFRAAARKAALAG---KPIVAFKIGRSESGA----QAAASHTGALAG 263 Query: 268 AEDKINA-MKEAGICIAPSPARI 289 A+ +A +EAGI A + + + Sbjct: 264 ADGMYDALFEEAGIIRAQAFSDL 286 >gi|215489168|ref|YP_002331599.1| FdrA-like protein [Escherichia coli O127:H6 str. E2348/69] gi|312969430|ref|ZP_07783632.1| protein fdrA [Escherichia coli 2362-75] gi|215267240|emb|CAS11689.1| FdrA-like protein [Escherichia coli O127:H6 str. E2348/69] gi|312285977|gb|EFR13895.1| protein fdrA [Escherichia coli 2362-75] Length = 519 Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 80/182 (43%), Gaps = 11/182 (6%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 AN ++I VP A ++++ + +I+ ++ + + +K + ++G Sbjct: 111 AEPEANLALISVPGDYAAAEAMKALNLGMNVIM-FSDNVSIGQEKSIKTLARERQRIVMG 169 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+C + I + ++ ++G++G++ SGT E + Q G G S A+G GG Sbjct: 170 PDCGTAIVNG---IPLGFANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGH 226 Query: 187 P----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + G + L+ D+ T IV++ + AQ + + A+ K +V F Sbjct: 227 DLSEEIGGISMLFALDALAQDDETRVIVLISKPPSPI---VAQTILERAEACGKPVVVNF 283 Query: 243 VA 244 + Sbjct: 284 LG 285 >gi|311104895|ref|YP_003977748.1| ATP-grasp domain-containing protein 1 [Achromobacter xylosoxidans A8] gi|310759584|gb|ADP15033.1| ATP-grasp domain protein 1 [Achromobacter xylosoxidans A8] Length = 709 Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 91/273 (33%), Gaps = 24/273 (8%) Query: 27 QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA 86 L + V G ++ + GG P + +++ E + ++I + S D+ Sbjct: 33 YDNLVLHSSVPGEVYAVNPAYQEIGGR---PCWPSISALPEA-EIDVALIMINASLVLDS 88 Query: 87 IIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCKI 140 + + IP V +T G + E + + GPNCPG + ++ Sbjct: 89 LRQCAARGIPFAVVMTSGFSEAGEEGQRLEREIAQLCEDTGLHVYGPNCPGFVNVRD-RL 147 Query: 141 GIMPGSIFR----KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 G+ F+ GS+G+ ++ G L GQ + E D Sbjct: 148 GMTFSPAFKDDLNSGSIGLATQGGGLGR---NLLQGLSYGQGVGLWFSAGNEVDLEIPDF 204 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGH 256 + D I ++ E + A E R R KP+V G++ R Sbjct: 205 IAHMANDPKIGVIALLMEGVKNGRRLTAAL---ELARARHKPVVVLKVGRSEAGVRAAQS 261 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 A ++ G A ++ G ++ Sbjct: 262 HTASVA---GTAAVNSAVFRQFGAIEVDDLDQL 291 >gi|301022861|ref|ZP_07186695.1| membrane protein FdrA [Escherichia coli MS 196-1] gi|299881054|gb|EFI89265.1| membrane protein FdrA [Escherichia coli MS 196-1] Length = 555 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|16128502|ref|NP_415051.1| multicopy suppressor of dominant negative ftsH mutations; predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli str. K-12 substr. MG1655] gi|89107386|ref|AP_001166.1| predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli str. K-12 substr. W3110] gi|170080101|ref|YP_001729421.1| acyl-CoA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|238899800|ref|YP_002925596.1| putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli BW2952] gi|2498376|sp|Q47208|FDRA_ECOLI RecName: Full=Protein fdrA gi|565641|dbj|BAA07638.1| FdrA protein [Escherichia coli] gi|1773198|gb|AAB40270.1| fdrA [Escherichia coli] gi|1786729|gb|AAC73620.1| multicopy suppressor of dominant negative ftsH mutations; predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli str. K-12 substr. MG1655] gi|85674656|dbj|BAE76296.1| predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli str. K12 substr. W3110] gi|169887936|gb|ACB01643.1| predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli str. K-12 substr. DH10B] gi|238862120|gb|ACR64118.1| predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli BW2952] gi|260450299|gb|ACX40721.1| FdrA family protein [Escherichia coli DH1] gi|315135199|dbj|BAJ42358.1| membrane protein FdrA [Escherichia coli DH1] Length = 555 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|269968805|ref|ZP_06182792.1| putative acetyltransferase [Vibrio alginolyticus 40B] gi|269826582|gb|EEZ80929.1| putative acetyltransferase [Vibrio alginolyticus 40B] Length = 536 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 92/249 (36%), Gaps = 30/249 (12%) Query: 57 PVFTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 P + V+ + +++ S + E E P + I++ LD Sbjct: 56 PRYKAVSGVIAYPDVASLPYTPDIAILCTNVSRNEQLLKELDERGTPFAIVISDDPKPLD 115 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 + + + R++GPN GI+ P + G + +S+S + + Sbjct: 116 ISSL-------NIRVLGPNSLGIILPWHNFNCTFSPVAAKPGKIAFISQSAAVCTTVLDW 168 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + + +G S+ + IG +F D+L+ D TE+I++ + ++A +F+ Sbjct: 169 ANDKNIGFSSFISIGRGQ--DIDFADLLDYLSMDGNTEAILLYVDNI----QDARRFMSA 222 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPA 287 R + I+ AG++ G D I +A++ G+ + Sbjct: 223 ARAASRNRRILVLKAGRSKEM--------NTFEQQDGDTLDVIYDSAIRRTGMLRVSNTH 274 Query: 288 RIGRSLVEL 296 + ++ L Sbjct: 275 ELFAAVETL 283 >gi|51595201|ref|YP_069392.1| acyl-CoA synthetase, NAD(P)-binding, ATP-binding [Yersinia pseudotuberculosis IP 32953] gi|51588483|emb|CAH20091.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding [Yersinia pseudotuberculosis IP 32953] Length = 880 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 97/281 (34%), Gaps = 29/281 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHP-KKG--STYWTGGNVNVPVFTTVAEAKERTAANASV 75 +AG + + + P K ++P+ +A N ++ Sbjct: 26 RAGFLMMRNLLDGGFNGPILPVTPNHKAVCGVLAYANIASLPITPDLAILCTHDCRNLTL 85 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + + + ++ P +KA ++ RL+GPN G+L P Sbjct: 86 L-----------EDLGNRGCKAAIILSA-TPEQFP-ELKACAQRHHMRLLGPNSLGLLAP 132 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 +KG + +S+S + + Q +G S + +G + + Sbjct: 133 WQGLNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIALGDSLDIDVDDL- 191 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 L+ D T +I++ E +A +FL R KP++ +G++ Sbjct: 192 -LDFLARDSKTSAIMLYIEHIS----DARRFLSASRSASRNKPVLVVKSGRSQ------- 239 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A +++G +G A++ AG+ + ++ L Sbjct: 240 RAQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|33601800|ref|NP_889360.1| putative acetyl-CoA synthetase [Bordetella bronchiseptica RB50] gi|33576237|emb|CAE33316.1| putative acetyl-CoA synthetase [Bordetella bronchiseptica RB50] Length = 679 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 29/260 (11%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P+ + F +V + + + VI V + + ++P Sbjct: 47 PVNPR------YQEVAGLRCFASVGDIPDE--VDHCVIVVGKERVPQVLRDCCAKQVPGA 98 Query: 99 VCITEGIPVL--DMVRVKARLEKSSS--RLIGPNCPGILTPDSCKIGIMPGSIFRK---- 150 T G D + LE+++S IGPNC G + + P ++ ++ Sbjct: 99 SIYTSGYAEASGDGREAQRALEEAASALTFIGPNCMGFSNLTARVMAA-PSAVLKRAEGV 157 Query: 151 GSVGILSRSGTLTY-EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 G V ++S+SG L Y + ++GLG S V G G + D++E D AT + Sbjct: 158 GDVALVSQSGGLAYATMAYYAQRDGLGFSHIVNTGNSA--GVSYSDLIEYMFQDPATRVV 215 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGA 268 + V E AE A + + + G +KP+V G+ R + H G++ G Sbjct: 216 LAVAE----AERAACEVIDAVHRLGLRKPVVLLKLGRGQTGTRMALSHTGSLA----GDY 267 Query: 269 EDKINAMKEAGICIAPSPAR 288 + ++ GI A + Sbjct: 268 RLVRDVAEQHGIACADDVDQ 287 >gi|300949215|ref|ZP_07163248.1| membrane protein FdrA [Escherichia coli MS 116-1] gi|300954336|ref|ZP_07166794.1| membrane protein FdrA [Escherichia coli MS 175-1] gi|300318673|gb|EFJ68457.1| membrane protein FdrA [Escherichia coli MS 175-1] gi|300451333|gb|EFK14953.1| membrane protein FdrA [Escherichia coli MS 116-1] gi|323943137|gb|EGB39294.1| FdrA protein [Escherichia coli E482] Length = 555 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|16763909|ref|NP_459524.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167990523|ref|ZP_02571623.1| protein FdrA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|16419039|gb|AAL19483.1| putative acyl-CoA synthetase, involved in protein transport [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205330989|gb|EDZ17753.1| protein FdrA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261245808|emb|CBG23606.1| putative acyl-CoA synthetase, involved in protein transport [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992251|gb|ACY87136.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157137|emb|CBW16621.1| FdrA protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911562|dbj|BAJ35536.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226111|gb|EFX51162.1| Protein fdrA [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323128849|gb|ADX16279.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332987478|gb|AEF06461.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 554 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ +++ V A + ++++ + ++ ++ + + D +R+K R Sbjct: 110 SACQKLPEASLALVSVAGEYAAELAEQALDRSLN-VMIFSDNVTLDDEIRLKRRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + ++ ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTAMIANTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE ++ + V + A Q + K KP Sbjct: 226 LGGRDLSAEVGGISALTALEILSADEKSQVLAFVSKPPADA---VRQHIIAAMKAAG-KP 281 Query: 239 IVGFVAGKTAPPGR 252 +V G ++P R Sbjct: 282 VVALFLGFSSPVAR 295 >gi|218693981|ref|YP_002401648.1| membrane protein FdrA [Escherichia coli 55989] gi|218350713|emb|CAU96405.1| putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli 55989] Length = 555 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|331001300|ref|ZP_08324926.1| CoA binding domain protein [Parasutterella excrementihominis YIT 11859] gi|329569027|gb|EGG50823.1| CoA binding domain protein [Parasutterella excrementihominis YIT 11859] Length = 893 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 114/309 (36%), Gaps = 33/309 (10%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 L + + ++ G + ++G+F T + + P G + + + Sbjct: 10 LFNPRSVAII-GASARSGSFGTLIWKIAKSASPRARLFPVNPKYKTIGRETS---YAALT 65 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEK 119 + KE + +V+ PPS A+ ++ + I+ G P D ++ + Sbjct: 66 DIKE--DVDLAVLVCPPSVYPKALENCLKKGVKNILLC-GGFPKSDLTEPVLEAINKTTA 122 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + R++GP G++TP S+ G VG++S+S L+ + + G S Sbjct: 123 AGVRIVGPQSLGLMTPSEGLNLSYLPSLPPAGEVGLVSQSPGLSCTIIDYVTNAQCGFSH 182 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + G + V D +++ D T IV+ E ++ + L KP+ Sbjct: 183 VIDPGFEQV--LTVADYVDMLAFDRKTRCIVLYLESF----QQPRKLLSAIRLAAANKPV 236 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDK----INAMKEAGICIAPSPARI-----G 290 + G+T + ++ G ED+ A+ AG + S + Sbjct: 237 ILLKGGQTP-------GSADIVINNSGAREDEDGVMKRALVRAGALLVTSLKELNYAVQA 289 Query: 291 RSLVELLGS 299 ++ + L S Sbjct: 290 FAMRKDLAS 298 >gi|91779088|ref|YP_554296.1| putative acyl-CoA synthetase [Burkholderia xenovorans LB400] gi|91691748|gb|ABE34946.1| putative acyl-CoA synthetase [Burkholderia xenovorans LB400] Length = 703 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 85/227 (37%), Gaps = 16/227 (7%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV---LDMVRVKARLEKSS-SRLIG 126 + +++ + A A+ E E + + G R + +E + R++G Sbjct: 71 PDVAIVLLGAERAHIAVRELAERGTAAAIVLASGYAETGDEGAERQRQLIEAAGSMRILG 130 Query: 127 PNCPGILTPDSCKI----GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 PN G++ G + F +GS+G++S+SG + + + + G+G S + Sbjct: 131 PNTIGLVNLTDSICLSASGALAMDRFTRGSIGVVSQSGGILGALLSRAAARGIGLSKLIS 190 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + + D ++ D AT+ I + E E+ L + KPIV F Sbjct: 191 TSNEA--DLDTADFIDYLAEDPATKVIALYLEEIRHPEKFRRAALAAAQRG---KPIVAF 245 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G++ R ++G + E GI A + + Sbjct: 246 KIGRSEGGSRAAASHTGALAGTDRMYD---AFFTEVGIIRANTFGDL 289 >gi|297204584|ref|ZP_06921981.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|297148734|gb|EDY54685.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 806 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 41/195 (21%), Positives = 77/195 (39%), Gaps = 16/195 (8%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVR 112 +V + E + +++ V + E E + +V ++ G + Sbjct: 252 HASVRDLPE--PPDLALVAVRAEAVPGVVRECAEVGVKAVVVVSTGFGETGVEGRAGELE 309 Query: 113 VKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 + S RL+GPNC G++ P + ++ G V + S+SG L + Sbjct: 310 LARFARASGMRLVGPNCMGVVNTTPAARLAATFSPALPTPGRVAMSSQSGPLGLAVLDYA 369 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + LG S V +G T+ ++L+ + D AT I++ E G + +F + Sbjct: 370 RRLRLGFSGFVSVGHAVDVSTD--ELLQWWEEDPATSVILLHVETFG----DPRRFARVA 423 Query: 231 AKRGRKKPIVGFVAG 245 + +KPIV G Sbjct: 424 RRVAPRKPIVAVHPG 438 >gi|110644167|ref|YP_671897.1| YahF/FdrA-like protein [Escherichia coli 536] gi|191173922|ref|ZP_03035441.1| bacterial FdrA protein [Escherichia coli F11] gi|300979484|ref|ZP_07174578.1| bacterial FdrA protein [Escherichia coli MS 200-1] gi|110345759|gb|ABG71996.1| YahF/FdrA-like protein [Escherichia coli 536] gi|190905789|gb|EDV65409.1| bacterial FdrA protein [Escherichia coli F11] gi|300307986|gb|EFJ62506.1| bacterial FdrA protein [Escherichia coli MS 200-1] gi|324014687|gb|EGB83906.1| bacterial FdrA protein [Escherichia coli MS 60-1] Length = 519 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 79/182 (43%), Gaps = 11/182 (6%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 AN ++I VP A ++++ + ++ ++ + + +K + ++G Sbjct: 111 AEPEANLALISVPGDYAAAEAMKALNLGMN-VMMFSDNVSIGQEKSIKTLARERQRIVMG 169 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+C + I + ++ ++G++G++ SGT E + Q G G S A+G GG Sbjct: 170 PDCGTAIVNG---IPLGFANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGH 226 Query: 187 P----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + G + L+ D+ T IV++ + AQ + + A+ K +V F Sbjct: 227 DLSEEIGGISMLFALDALAQDDETRVIVLISKPPSPI---VAQTILERAEACGKPVVVNF 283 Query: 243 VA 244 + Sbjct: 284 LG 285 >gi|303256240|ref|ZP_07342256.1| putative acetyl-CoA synthetase / acetyltransferase (GNAT) family protein [Burkholderiales bacterium 1_1_47] gi|302860969|gb|EFL84044.1| putative acetyl-CoA synthetase / acetyltransferase (GNAT) family protein [Burkholderiales bacterium 1_1_47] Length = 893 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 114/309 (36%), Gaps = 33/309 (10%) Query: 4 LVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVA 63 L + + ++ G + ++G+F T + + P G + + + Sbjct: 10 LFNPRSVAII-GASARSGSFGTLIWKIAKSASPRARLFPVNPKYKTIGRETS---YAALT 65 Query: 64 EAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD----MVRVKARLEK 119 + KE + +V+ PPS A+ ++ + I+ G P D ++ + Sbjct: 66 DIKE--DVDLAVLVCPPSVYPKALENCLKKGVKNILLC-GGFPKSDLTEPVLEAINKTTA 122 Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + R++GP G++TP S+ G VG++S+S L+ + + G S Sbjct: 123 AGVRIVGPQSLGLMTPSEGLNLSYLPSLPPAGEVGLVSQSPGLSCTIIDYVTNAQCGFSH 182 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + G + V D +++ D T IV+ E ++ + L KP+ Sbjct: 183 VIDPGFEQV--LTVADYVDMLAFDRKTRCIVLYLESF----QQPRKLLSAIRLAAANKPV 236 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDK----INAMKEAGICIAPSPARI-----G 290 + G+T + ++ G ED+ A+ AG + S + Sbjct: 237 ILLKGGQTP-------GSADIVINNSGAREDEDGVMKRALVRAGALLVTSLKELNYAVQA 289 Query: 291 RSLVELLGS 299 ++ + L S Sbjct: 290 FAMRKDLAS 298 >gi|221213072|ref|ZP_03586048.1| CoA binding domain protein [Burkholderia multivorans CGD1] gi|221167285|gb|EED99755.1| CoA binding domain protein [Burkholderia multivorans CGD1] Length = 721 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 50/225 (22%), Positives = 82/225 (36%), Gaps = 25/225 (11%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR-------LEKSSSR 123 + V+ V S + E+I + G A + + R Sbjct: 75 PDCVVMCVAQSLVEPTLEEAIAVGAGGAIVYASGYSETGRAERIAAQERLVEIARRGAIR 134 Query: 124 LIGPNCPGILTPDSCK-IGIMP----GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 + GPNC G+ + + MP R G V ++S+SG L Y + Q G+G S Sbjct: 135 IAGPNCVGLANVRTGAAMNFMPDCGKMINGRSGRVAVVSQSGALGYTVL-QAMTRGVGIS 193 Query: 179 TAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA-KRGRKK 237 + G + D + D SI+ + E + A+FL+ K Sbjct: 194 HYLAAGNS--SDVDVADFIATLADDPEVGSIICLFE----GVKSGARFLEAARLADAAGK 247 Query: 238 PIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGIC 281 P+V + AG TA G+ + H G ++ G A++E G Sbjct: 248 PLVVYKAGNTAASGKAALSHTGTLV----GSVAAYRAALEEVGAI 288 >gi|168240363|ref|ZP_02665295.1| protein FdrA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194450118|ref|YP_002044562.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194408422|gb|ACF68641.1| protein FdrA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205340416|gb|EDZ27180.1| protein FdrA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 554 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ +++ V A + ++++ + ++ ++ + + D +R+K R Sbjct: 110 SACQKLPEASLALVSVAGEYAAELAEQALDRSLN-VMIFSDNVTLDDEIRLKRRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + ++ ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTAMIANTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE ++ + V + A Q + K KP Sbjct: 226 LGGRDLSAEVGGISALTALEILSADEKSQVLAFVSKPPADA---VRQHIIAAMKAAG-KP 281 Query: 239 IVGFVAGKTAPPGR 252 +V G ++P R Sbjct: 282 VVALFLGFSSPVAR 295 >gi|319761015|ref|YP_004124952.1| CoA-binding domain protein [Alicycliphilus denitrificans BC] gi|317115576|gb|ADU98064.1| CoA-binding domain protein [Alicycliphilus denitrificans BC] Length = 691 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 88/261 (33%), Gaps = 23/261 (8%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 +T G I+P G P ++ E + + P A+ E Sbjct: 41 RTGFAGRIYPINPRRDEIQGLKAWPSLQSLPEV-----PDQVFVLTPTETVIPAVRECAA 95 Query: 93 AEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCK----IGI 142 + ++ + G ++ +++ R++GP+ G++ P + Sbjct: 96 LGVKVVTILASGFSESGAEGAAREGELRRIAKETGIRILGPSSLGVVNPRTGLVLTANAA 155 Query: 143 MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA 202 G V + S SG++ V + G+G + V +G + ++ L Sbjct: 156 FAEPDLPPGKVFVASHSGSMIGALVSRGKARGVGFAGLVSVGSE--VDLNVGEICAATLD 213 Query: 203 DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 D A E ++ E E A A+ KP++ + G++A I+ Sbjct: 214 DPAIEGYLLFLESLRHGPELRAFARAAHARG---KPVIAYKLGRSAAAAEMATTHTGAIA 270 Query: 263 GGKGGAEDKINAMKEAGICIA 283 G A+ +K+ G+ Sbjct: 271 GEDDIAD---AFLKDMGVARV 288 >gi|331676187|ref|ZP_08376899.1| protein FdrA [Escherichia coli H591] gi|331076245|gb|EGI47527.1| protein FdrA [Escherichia coli H591] Length = 555 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ + AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLSDANLALISVAGEYAAELTNQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|331666873|ref|ZP_08367747.1| protein FdrA [Escherichia coli TA271] gi|331066097|gb|EGI37981.1| protein FdrA [Escherichia coli TA271] Length = 550 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ + AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLSDANLALISVAGEYAAELTNQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|15800255|ref|NP_286267.1| membrane protein FdrA [Escherichia coli O157:H7 EDL933] gi|15829834|ref|NP_308607.1| membrane protein FdrA [Escherichia coli O157:H7 str. Sakai] gi|168747798|ref|ZP_02772820.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4113] gi|168754632|ref|ZP_02779639.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4401] gi|168760318|ref|ZP_02785325.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4501] gi|168768481|ref|ZP_02793488.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4486] gi|168774594|ref|ZP_02799601.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4196] gi|168779021|ref|ZP_02804028.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4076] gi|168786379|ref|ZP_02811386.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC869] gi|195936085|ref|ZP_03081467.1| membrane protein FdrA [Escherichia coli O157:H7 str. EC4024] gi|208808061|ref|ZP_03250398.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4206] gi|208815194|ref|ZP_03256373.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4045] gi|208823159|ref|ZP_03263477.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4042] gi|209396962|ref|YP_002269171.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4115] gi|217325292|ref|ZP_03441376.1| bacterial FdrA protein [Escherichia coli O157:H7 str. TW14588] gi|254791706|ref|YP_003076543.1| membrane protein FdrA [Escherichia coli O157:H7 str. TW14359] gi|261224006|ref|ZP_05938287.1| predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli O157:H7 str. FRIK2000] gi|261257700|ref|ZP_05950233.1| predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli O157:H7 str. FRIK966] gi|291281429|ref|YP_003498247.1| Bacterial FdrA protein [Escherichia coli O55:H7 str. CB9615] gi|12513415|gb|AAG54875.1|AE005233_1 involved in protein transport; multicopy suppressor of dominant negative ftsH mutants [Escherichia coli O157:H7 str. EDL933] gi|13360038|dbj|BAB34003.1| multicopy suppressor fdrA [Escherichia coli O157:H7 str. Sakai] gi|187769774|gb|EDU33618.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4196] gi|188017663|gb|EDU55785.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4113] gi|189002702|gb|EDU71688.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4076] gi|189358088|gb|EDU76507.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4401] gi|189362472|gb|EDU80891.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4486] gi|189369184|gb|EDU87600.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4501] gi|189373768|gb|EDU92184.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC869] gi|208727862|gb|EDZ77463.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4206] gi|208731842|gb|EDZ80530.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4045] gi|208737352|gb|EDZ85036.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4042] gi|209158362|gb|ACI35795.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC4115] gi|217321513|gb|EEC29937.1| bacterial FdrA protein [Escherichia coli O157:H7 str. TW14588] gi|254591106|gb|ACT70467.1| predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli O157:H7 str. TW14359] gi|290761302|gb|ADD55263.1| Bacterial FdrA protein [Escherichia coli O55:H7 str. CB9615] gi|320192943|gb|EFW67583.1| Protein fdrA [Escherichia coli O157:H7 str. EC1212] gi|320638297|gb|EFX08022.1| membrane protein FdrA [Escherichia coli O157:H7 str. G5101] gi|320643701|gb|EFX12831.1| membrane protein FdrA [Escherichia coli O157:H- str. 493-89] gi|320649017|gb|EFX17604.1| membrane protein FdrA [Escherichia coli O157:H- str. H 2687] gi|320660381|gb|EFX27852.1| membrane protein FdrA [Escherichia coli O55:H7 str. USDA 5905] gi|320665075|gb|EFX32172.1| membrane protein FdrA [Escherichia coli O157:H7 str. LSU-61] gi|326341291|gb|EGD65083.1| Protein fdrA [Escherichia coli O157:H7 str. 1044] Length = 555 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|168231526|ref|ZP_02656584.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472717|ref|ZP_03078701.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194459081|gb|EDX47920.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205334154|gb|EDZ20918.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 554 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 87/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN +++ V A + ++++ + ++ ++ + + D +R+K R Sbjct: 110 SACQKLPEANLALVSVAGEYAAELAEQALDRSLN-VMIFSDNVTLDDEIRLKRRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + ++ ++ +G++G++ SGT E Q + G G + +G Sbjct: 169 LVMGPDCGTAMIANTPLA---FANVIPEGNIGVIGASGTGIQELCSQIALAGEGITHTIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + L++ ADE ++ + V + A Q + K KP Sbjct: 226 LGGRDLSAEVGGISALTALDILSADEKSQVLAFVSKPPADA---VRQHIIAAMKATG-KP 281 Query: 239 IVGFVAGKTAPPGR 252 +V G ++P R Sbjct: 282 VVALFLGFSSPVAR 295 >gi|188494889|ref|ZP_03002159.1| bacterial FdrA protein [Escherichia coli 53638] gi|188490088|gb|EDU65191.1| bacterial FdrA protein [Escherichia coli 53638] Length = 555 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q +Q G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIAQAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|170682351|ref|YP_001746152.1| acyl-CoA synthetase [Escherichia coli SMS-3-5] gi|170520069|gb|ACB18247.1| bacterial FdrA protein [Escherichia coli SMS-3-5] Length = 519 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 11/182 (6%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 AN ++I VP A I+++ + ++ ++ + ++ +K + ++G Sbjct: 111 AEPEANLALISVPGDYAAAEAIKALNLGMN-VMMFSDNVSIVQEKSIKTLARERQRIVMG 169 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+C + I + ++ ++G++G++ SGT E + Q G G S A+G GG Sbjct: 170 PDCGTAIVNG---IPLGFANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGH 226 Query: 187 P----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + G + L+ D+ T IV++ + A+ + + A+ K +V F Sbjct: 227 DLSEEIGGISMLFALDALAQDDETRVIVLISKPPSPI---VARTILERAEACGKPVVVNF 283 Query: 243 VA 244 + Sbjct: 284 LG 285 >gi|300939943|ref|ZP_07154572.1| bacterial FdrA protein [Escherichia coli MS 21-1] gi|300455205|gb|EFK18698.1| bacterial FdrA protein [Escherichia coli MS 21-1] Length = 519 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 11/182 (6%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 AN ++I VP A I+++ + ++ ++ + ++ +K + ++G Sbjct: 111 AEPEANLALISVPGDYAAAEAIKALNLGMN-VMMFSDNVSIVQEKSIKTLARERQRIVMG 169 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+C + I + ++ ++G++G++ SGT E + Q G G S A+G GG Sbjct: 170 PDCGTAIVNG---IPLGFANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGH 226 Query: 187 P----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + G + L+ D+ T IV++ + A+ + + A+ K +V F Sbjct: 227 DLSEEIGGISMLFALDALAQDDETRVIVLISKPPSPI---VARTILERAEACGKPVVVNF 283 Query: 243 VA 244 + Sbjct: 284 LG 285 >gi|293418585|ref|ZP_06661020.1| FdrA protein [Escherichia coli B088] gi|291325113|gb|EFE64528.1| FdrA protein [Escherichia coli B088] Length = 555 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|194438649|ref|ZP_03070737.1| bacterial FdrA protein [Escherichia coli 101-1] gi|253775539|ref|YP_003038370.1| FdrA family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163780|ref|YP_003046888.1| hypothetical protein ECB_03714 [Escherichia coli B str. REL606] gi|300929996|ref|ZP_07145429.1| bacterial FdrA protein [Escherichia coli MS 187-1] gi|194422453|gb|EDX38452.1| bacterial FdrA protein [Escherichia coli 101-1] gi|242379366|emb|CAQ34180.1| ybl187 [Escherichia coli BL21(DE3)] gi|253326583|gb|ACT31185.1| FdrA family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975681|gb|ACT41352.1| conserved hypothetical protein [Escherichia coli B str. REL606] gi|253979837|gb|ACT45507.1| conserved hypothetical protein [Escherichia coli BL21(DE3)] gi|300462086|gb|EFK25579.1| bacterial FdrA protein [Escherichia coli MS 187-1] gi|323959092|gb|EGB54761.1| FdrA protein [Escherichia coli H489] gi|323969322|gb|EGB64621.1| FdrA protein [Escherichia coli TA007] gi|332345813|gb|AEE59147.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 519 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 11/182 (6%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 AN ++I VP A I+++ + ++ ++ + ++ +K + ++G Sbjct: 111 AEPEANLALISVPGDYAAAEAIKALNLGMN-VMMFSDNVSIVQEKSIKTLARERQRIVMG 169 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+C + I + ++ ++G++G++ SGT E + Q G G S A+G GG Sbjct: 170 PDCGTAIVNG---IPLGFANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGH 226 Query: 187 P----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + G + L+ D+ T IV++ + A+ + + A+ K +V F Sbjct: 227 DLSEEIGGISMLFALDALAQDDETRVIVLISKPPSPI---VARTILERAEACGKPVVVNF 283 Query: 243 VA 244 + Sbjct: 284 LG 285 >gi|293413776|ref|ZP_06656425.1| FdrA protein [Escherichia coli B185] gi|291433834|gb|EFF06807.1| FdrA protein [Escherichia coli B185] Length = 555 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|27381487|ref|NP_773016.1| hypothetical protein bll6376 [Bradyrhizobium japonicum USDA 110] gi|27354655|dbj|BAC51641.1| bll6376 [Bradyrhizobium japonicum USDA 110] Length = 750 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 85/281 (30%), Gaps = 26/281 (9%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 + G V ++P++ + + V + + +++ V Sbjct: 56 RIGGRPLRYLREAGFAGAVYPVNPRRN------EVQGLRAYADVRDIP--GPVDLAIVIV 107 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR------LEKSSSRLIGPNCPGI 132 + I E I + + G + + + + RL+GPNC G Sbjct: 108 SADLVVETIEACAEKGIGCAIIFSSGFAEVGPEGARRQQRIEEIARAAGMRLLGPNCLGA 167 Query: 133 LTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 S G + G +G++S+SG + Q +G + G + Sbjct: 168 FNSHSGFFGTFTQAFDTGVMFPGELGVVSQSGAAGAHLAYMCRQRCIGIGHWITTGNEA- 226 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 E + +E + I + E + EA R KP++ G++A Sbjct: 227 -DIEVSECVEWMAHAPHVKVIALFVEAIRNGPRFVRAL---EAAREHGKPVIAIKVGRSA 282 Query: 249 PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + G + +++ G A S + Sbjct: 283 AGALAAASHTGALVGEDKIYDAV---LRQHGAYRAESIDEL 320 >gi|300919167|ref|ZP_07135698.1| membrane protein FdrA [Escherichia coli MS 115-1] gi|300413728|gb|EFJ97038.1| membrane protein FdrA [Escherichia coli MS 115-1] Length = 555 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q +Q G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIAQAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|152989139|ref|YP_001349720.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa PA7] gi|150964297|gb|ABR86322.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa PA7] Length = 715 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 89/283 (31%), Gaps = 30/283 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 + G + + + ++P + +P F V E + +++ V Sbjct: 38 RIGGRPIAYMLRHGYAGRILPVNPNR------TEIQGLPAFAEVEALPEAP--DVAIVAV 89 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGI 132 P + + + + + G + A S RL+GPN G+ Sbjct: 90 PAAQVLETVQALGRKGARSAIVFSSGFSEVGAAGAAMQEAIVAAARASGMRLLGPNALGV 149 Query: 133 LTPDSCKIGI----MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 + M + G VGI ++SG + Q LG V G + Sbjct: 150 FNGNLGYYAFFSTSMERGVPLPGRVGIATQSGAYGAHLLGMARQRHLGTPICVATGNEA- 208 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 D + + + ++ E + + A + KP++ G++A Sbjct: 209 -DVTLGDSIGWLVESPEIDVVMAYAESIRNVDSFLAALERAHRAG---KPVILHKVGRSA 264 Query: 249 PPGRTMGHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARI 289 R A ++G +DK+ + + + A + + Sbjct: 265 LGSRAALSHTASLAG-----DDKVLDAVLGDYAVIRARTTEEL 302 >gi|222112584|ref|YP_002554848.1| CoA-binding domain-containing protein [Acidovorax ebreus TPSY] gi|221732028|gb|ACM34848.1| CoA-binding domain protein [Acidovorax ebreus TPSY] Length = 690 Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 93/282 (32%), Gaps = 28/282 (9%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 KAG + + + I+P + +P + ++ E +A VI + Sbjct: 23 KAGGRPIDYMRRHGYAGRIFPINPNR------SEVQGLPAYASLRALPEAP--DAVVISL 74 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVL------DMVRVKARLEKSSSRLIGPNCPGI 132 P AI + + V + G L + AR + RL GPNC G+ Sbjct: 75 PSEDVAAAIDDCVAVGAKAAVIYSSGFAELGDAGRAQQADLLARARRGGLRLFGPNCQGV 134 Query: 133 --LTPDSCKIGIMPGSIFRKG--SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 + + G V I+S+SG + G+G V G + Sbjct: 135 ANFASGAILNFSTMINESPPGDGPVAIVSQSGAGAAILYGGLRRAGIGVRYMVSTGNEAD 194 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT- 247 + + + DE +V+ E + A+ + +RG I+ AG+T Sbjct: 195 ICA--AEAVRAVVQDERIRLVVLYVETLRQSAY-LAEAARLARERGVT--ILAVKAGRTS 249 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 A H GA+ + +++ GI + Sbjct: 250 AGQATASSHTGALAAEDALAD----AFLRQHGIPRLADFREL 287 >gi|168798092|ref|ZP_02823099.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC508] gi|189379310|gb|EDU97726.1| bacterial FdrA protein [Escherichia coli O157:H7 str. EC508] Length = 555 Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPLA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|159037061|ref|YP_001536314.1| CoA-binding domain-containing protein [Salinispora arenicola CNS-205] gi|157915896|gb|ABV97323.1| CoA-binding domain protein [Salinispora arenicola CNS-205] Length = 909 Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 98/257 (38%), Gaps = 23/257 (8%) Query: 21 GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPP 80 G Y T V +HP + G +P + + AE + +V+ VPP Sbjct: 240 GAAVLGHLRDYGFTGAVVPVHPS--ARTVAG----LPAYPSAAE--AGLPVDLAVVAVPP 291 Query: 81 SGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILT 134 + + ++ A +V I+ G R+ + R+IGPNC G+ Sbjct: 292 AAVEAVVADAASAGAHGLVVISAGFAEAGADGAVAQRRLVRAAHAAGMRIIGPNCLGVAN 351 Query: 135 PDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 + + + G VG+ S+SG + + + GLG S+ V G Sbjct: 352 TGTEVRLNATLAPRLPVPGRVGLFSQSGAFGVALLAEVDRRGLGLSSLVSAGNRA--DVS 409 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP-G 251 D+L+ + D T+ I++ E G+ +F + + GR+KPIV P G Sbjct: 410 GNDLLQYWQDDPDTDVILLYLETFGNP----RKFARLARRIGREKPIVALAPPARLPGLG 465 Query: 252 RTMGHAGAVISGGKGGA 268 + G G + G A Sbjct: 466 PSAGPNGGAANPYGGVA 482 >gi|160891620|ref|ZP_02072623.1| hypothetical protein BACUNI_04073 [Bacteroides uniformis ATCC 8492] gi|156859027|gb|EDO52458.1| hypothetical protein BACUNI_04073 [Bacteroides uniformis ATCC 8492] Length = 687 Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 94/266 (35%), Gaps = 22/266 (8%) Query: 32 CQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAI-IES 90 T + ++PK V F V + + +++ +P + DA+ + + Sbjct: 36 GYTGELRAVNPK------ETEVQGVAAFADVKDI---PDTDLAILAIPAALCPDAVEMLA 86 Query: 91 IEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP 144 E ++ + ++ G R+ + + + LIGPNC G + + P Sbjct: 87 AEKQVKAFIILSAGFGEETHEGAVLEDRILETVNRYGASLIGPNCIGFMNSWHHSVFSQP 146 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 V ++S SG + +GL ++ +G G E DVL+ Sbjct: 147 IPQLHPQGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQYMDEHF 204 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 E+ + + + + + L + +K +A A + A + +G Sbjct: 205 NPEADSRIKLLYIESIGDPDRLLFHASSLIKK---GCKIAAIKAGSSESGSRAASSHTGA 261 Query: 265 KGGAEDKINA-MKEAGICIAPSPARI 289 ++ + A ++AGI S + Sbjct: 262 IASSDSAVEALFRKAGIVRCYSREEL 287 >gi|317478302|ref|ZP_07937466.1| CoA binding domain-containing protein [Bacteroides sp. 4_1_36] gi|316905461|gb|EFV27251.1| CoA binding domain-containing protein [Bacteroides sp. 4_1_36] Length = 687 Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 94/266 (35%), Gaps = 22/266 (8%) Query: 32 CQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAI-IES 90 T + ++PK V F V + + +++ +P + DA+ + + Sbjct: 36 GYTGELRAVNPK------ETEVQGVAAFADVKDI---PDTDLAILAIPAALCPDAVEMLA 86 Query: 91 IEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP 144 E ++ + ++ G R+ + + + LIGPNC G + + P Sbjct: 87 AEKQVKAFIILSAGFGEETHEGAVLEDRILETVNRYGASLIGPNCIGFMNSWHHSVFSQP 146 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 V ++S SG + +GL ++ +G G E DVL+ Sbjct: 147 IPQLHPQGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQYMDEHF 204 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 E+ + + + + + L + +K +A A + A + +G Sbjct: 205 NPEADSRIKLLYIESIGDPDRLLFHASSLIKK---GCKIAAIKAGSSESGSRAASSHTGA 261 Query: 265 KGGAEDKINA-MKEAGICIAPSPARI 289 ++ + A ++AGI S + Sbjct: 262 IASSDSAVEALFRKAGIVRCYSREEL 287 >gi|270295317|ref|ZP_06201518.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274564|gb|EFA20425.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 686 Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 94/266 (35%), Gaps = 22/266 (8%) Query: 32 CQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAI-IES 90 T + ++PK V F V + + +++ +P + DA+ + + Sbjct: 36 GYTGELRAVNPK------ETEVQGVAAFADVKDI---PDTDLAILAIPAALCPDAVEMLA 86 Query: 91 IEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP 144 E ++ + ++ G R+ + + + LIGPNC G + + P Sbjct: 87 AEKQVKAFIILSAGFGEETHEGAVLEDRILETVNRYGASLIGPNCIGFMNSWHHSVFSQP 146 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 V ++S SG + +GL ++ +G G E DVL+ Sbjct: 147 IPQLHPQGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQYMDEHF 204 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 E+ + + + + + L + +K +A A + A + +G Sbjct: 205 NPEADSRIKLLYIESIGDPDRLLFHASSLIKK---GCKIAAIKAGSSESGSRAASSHTGA 261 Query: 265 KGGAEDKINA-MKEAGICIAPSPARI 289 ++ + A ++AGI S + Sbjct: 262 IASSDSAVEALFRKAGIVRCYSREEL 287 >gi|311109867|ref|YP_003982718.1| CoA binding domain-containing protein 6 [Achromobacter xylosoxidans A8] gi|310764556|gb|ADP20003.1| CoA binding domain protein 6 [Achromobacter xylosoxidans A8] Length = 721 Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 88/245 (35%), Gaps = 24/245 (9%) Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 P ++ + ++ +P A DA+ E+ +A + G + A Sbjct: 64 PCHASLRALPSAP--DCVIVALPWQAALDAVREAADAGAGGAIVYASGFAETGLAERVAL 121 Query: 117 -------LEKSSSRLIGPNCPGILTP--DSCKIGIM--PGSIFRKGSVGILSRSGTLTYE 165 S R++GPNC GI + + M G VG++S+SG L Y Sbjct: 122 QSAMSDIARGSGMRILGPNCLGIANNKLGAGLLFQMGYAALQHPPGRVGLVSQSGALGYA 181 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + Q + G+ + + G + +D+ + D + S+ V E G AE Sbjct: 182 LL-QGANHGMAYTHLLTAGNS--CDVDTLDLANYLVHDADSRSVACVLEAAGDAERLLE- 237 Query: 226 FLKDEAKRGRKKPIVGFVAGK-TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 + KP++ + A H G++ G ++ AM+ G A Sbjct: 238 --LSDVAHACAKPVIVYKTAVGEAAATAAQSHTGSLA----GSSQAFEAAMRRGGFIRAA 291 Query: 285 SPARI 289 S A + Sbjct: 292 SLAEL 296 >gi|200390577|ref|ZP_03217188.1| protein FdrA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199603022|gb|EDZ01568.1| protein FdrA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 554 Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN +++ V A + ++++ + ++ ++ + + D +R+K R Sbjct: 110 SACQKLPEANLALVSVAGEYAAELAEQALDRSLN-VMIFSDNVTLDDEIRLKRRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + ++ ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTAMIANTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + L++ ADE ++ + V + A Q + K KP Sbjct: 226 LGGRDLSAEVGGISALMALDILSADEKSQVLAFVSKPPADA---VRQHIIAAMKATG-KP 281 Query: 239 IVGFVAGKTAPPGR 252 +V G ++P R Sbjct: 282 VVALFLGFSSPVAR 295 >gi|281180889|dbj|BAI57219.1| conserved hypothetical protein [Escherichia coli SE15] Length = 519 Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 11/182 (6%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 AN ++I VP A I+++ + ++ ++ + ++ +K + ++G Sbjct: 111 AEPEANLALISVPGDYAAAEAIKALNLGMN-VMMFSDNVSIVQEKSIKTLARERQRIVMG 169 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+C + I + ++ ++G++G++ SGT E + Q G G S A+G GG Sbjct: 170 PDCGTAIVNG---IPLGFANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGH 226 Query: 187 P----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + G + L+ D+ T IV++ + A+ + + A+ K +V F Sbjct: 227 DLSKEIGGISMLFALDALAQDDETRVIVLISKPPSPI---VARTILERAEACGKPVVVNF 283 Query: 243 VA 244 + Sbjct: 284 LG 285 >gi|83590948|ref|YP_430957.1| FdrA [Moorella thermoacetica ATCC 39073] gi|83573862|gb|ABC20414.1| FdrA [Moorella thermoacetica ATCC 39073] Length = 520 Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 16/221 (7%) Query: 60 TTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE 118 T+ A E AN ++I VP + A ++++ + + + ++ + + D VR+K Sbjct: 104 KTLRSAVEALPGANLALISVPGTYAAAEALKALNLGLNVHL-FSDNVTLEDEVRLKQIGT 162 Query: 119 KSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQS 178 K ++GP+C + + + ++ +G +GI+ SGT EA + G G S Sbjct: 163 KKGLLVMGPDCGTAIIDG---VPLAFANVVARGKIGIVGASGTGIQEATVLIERLGGGIS 219 Query: 179 TAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 A+G GG V G + ++L D ATE I+++ + G A + D K+ Sbjct: 220 HAIGTGGRDLLDEVGGQMMLLGIDLLEDDPATEVILLISKPAGP---RTANKILDRVKQC 276 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM 275 +K +V + G + AG V + A K A+ Sbjct: 277 KKPVVVNLLKGDL----NAIQSAGVVGAATIEDAAYKAVAL 313 >gi|33592458|ref|NP_880102.1| putative acetyl-CoA synthetase [Bordetella pertussis Tohama I] gi|33572104|emb|CAE41642.1| putative acetyl-CoA synthetase [Bordetella pertussis Tohama I] gi|332381874|gb|AEE66721.1| putative acetyl-CoA synthetase [Bordetella pertussis CS] Length = 679 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 102/261 (39%), Gaps = 29/261 (11%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P+ + F +V + + + VI V + + ++P Sbjct: 47 PVNPR------YQEVAGLRCFASVGDIPDE--VDHCVIVVGKERVPQVLRDCCAKQVPGA 98 Query: 99 VCITEGIPVL--DMVRVKARLEKSSS--RLIGPNCPGILTPDSCKIGIMPGSIFRK---- 150 G D + LE+++S IGPNC G + + P ++ ++ Sbjct: 99 SIYISGYAEASGDGREAQRALEEAASALTFIGPNCMGFSNLTARVMAA-PSAVLKRAEGV 157 Query: 151 GSVGILSRSGTLTY-EAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 G V ++S+SG L Y + ++GLG S V G G + D++E D AT + Sbjct: 158 GDVALVSQSGGLAYATMAYYAQRDGLGFSHIVNTGNSA--GVSYSDLIEYMFQDPATRVV 215 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGA 268 + V E AE A + + + G +KP+V G+ R + H G++ G Sbjct: 216 LAVAE----AERAACEVIDAVHRLGLRKPVVLLKLGRGQTGTRMALSHTGSLA----GDY 267 Query: 269 EDKINAMKEAGICIAPSPARI 289 + ++ GI A ++ Sbjct: 268 RLVRDVAEQHGIACADDVDQV 288 >gi|290956913|ref|YP_003488095.1| acyl-CoA synthetase [Streptomyces scabiei 87.22] gi|260646439|emb|CBG69536.1| Putative acyl-CoA synthetase [Streptomyces scabiei 87.22] Length = 964 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 91/251 (36%), Gaps = 31/251 (12%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------L 108 VP +V + E + +V+ VP + + + E E + +V I+ G Sbjct: 260 GVPAHRSVTDIGE--PVDLAVVAVPAAHVPEVVAECGEHGVQGLVVISAGYAESGPDGRE 317 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + + R+IGPN GI+ PD + R G +G+ ++SG + Sbjct: 318 RQRELVRQARTYGMRIIGPNAFGIINTAPDVRLNASLAPEAPRSGRIGLFAQSGAIGIAL 377 Query: 167 VFQTSQE------GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 + + + G ST V G DVL+ + D T+ ++M E G+ Sbjct: 378 LSRLHRRGGGVTGVTGVSTFVSSGNRA--DVSGNDVLQYWYEDPDTDVVLMYLESIGNP- 434 Query: 221 EEAAQFLKDEAKRGRKKPIVGFVAGKT--APPGRTMGHAGAVISGGKGGAEDKINAMKEA 278 +F + + KP+V + AP G + + +++A Sbjct: 435 ---RKFTRLARRTAAVKPLVVVQGARHGSAPQGHAVRATELPHTTVSAL-------LRQA 484 Query: 279 GICIAPSPARI 289 G+ + + Sbjct: 485 GVIRVDTITEL 495 >gi|323170652|gb|EFZ56302.1| protein fdrA [Escherichia coli LT-68] Length = 555 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ + AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLSDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|320539498|ref|ZP_08039167.1| putative truncated fused acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Serratia symbiotica str. Tucson] gi|320030623|gb|EFW12633.1| putative truncated fused acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Serratia symbiotica str. Tucson] Length = 767 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 67/175 (38%), Gaps = 13/175 (7%) Query: 122 SRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 RL+GPN G+L P +KG + +S+S + + Q +G S + Sbjct: 1 MRLLGPNSLGLLAPWQSVNASFSPLPIQKGKLAFVSQSAAVANTVLDWAQQREIGFSYFI 60 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 +G D+L+ + T +I++ E +A +FL R KPI+ Sbjct: 61 ALGDS--LDINIDDLLDFLARNAKTSAILLYLENIS----DARRFLSAARSASRNKPILV 114 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +G++ A +++ G A++ AG+ + ++ L Sbjct: 115 IKSGRSQ-------QAQILLNSPLGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 162 >gi|225568278|ref|ZP_03777303.1| hypothetical protein CLOHYLEM_04352 [Clostridium hylemonae DSM 15053] gi|225162997|gb|EEG75616.1| hypothetical protein CLOHYLEM_04352 [Clostridium hylemonae DSM 15053] Length = 484 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 54/245 (22%), Positives = 92/245 (37%), Gaps = 31/245 (12%) Query: 71 ANASVIYVPPSGAGDAIIESI-----EAEIPLIVCIT---------EGIPVLDMVRVKAR 116 V+ P D + + ++ +IVCI EGI D + Sbjct: 69 VELVVLGTPAKMIYDIMDDLAVRMEKRRDVKVIVCIAADYGETKTEEGIRRQDCLIQ--T 126 Query: 117 LEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFR--KGSVGILSRSGTLTYEAVFQT 170 EK R++GPNC GI+ D+ + + R KG + +S+SG + + Sbjct: 127 AEKYGIRVVGPNCIGIIDNINRVDTTFVETLIPKEMRGQKGGISFISQSGAMAASILMMG 186 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + S I + + ID+LE F D T+ I M E + + + Sbjct: 187 ASGPAPISMNKFISIGNMADVDCIDLLEYFEQDADTKVIGMYLEGY----PDGRKLIDTL 242 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARI 289 A+ RKKP+V G+++ A +G GA+ A ++ GI + + Sbjct: 243 ARIARKKPVVILKVGRSSIGA----EAANSHTGSLAGADSVYDAAFRQFGIIRVYTIEDM 298 Query: 290 GRSLV 294 +L Sbjct: 299 MDTLQ 303 >gi|108798482|ref|YP_638679.1| CoA-binding protein [Mycobacterium sp. MCS] gi|119867583|ref|YP_937535.1| CoA-binding domain-containing protein [Mycobacterium sp. KMS] gi|108768901|gb|ABG07623.1| CoA-binding protein [Mycobacterium sp. MCS] gi|119693672|gb|ABL90745.1| CoA-binding domain protein [Mycobacterium sp. KMS] Length = 703 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 106/304 (34%), Gaps = 30/304 (9%) Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 ++ L++ T +V GL+ K+ L +V +HP + G PV+ Sbjct: 14 LARLLNPKTIAIV-GLSDKSPVAQFVAPTLESDAEVY-FVHPT--AQTVLGA----PVYQ 65 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVK 114 ++++ +A + + E + IV G L R+ Sbjct: 66 SISQIP--VPVDAVLSVMSAERTVALAEECAALDCGGIVVYAAGFSELGAEGADYQARLV 123 Query: 115 ARLEKSSSRLIGPNCPGIL-TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + + +IGPN G + P S + GSV ++S SG + Q Sbjct: 124 DAVNRGGMAVIGPNSLGYISMPRSLHLTASADYHPAAGSVSVVSHSGAMIGGIAIAARQR 183 Query: 174 -GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAK 232 G+G S + G + + D L+ D T +I +V E A+F + + Sbjct: 184 TGVGISRLISAGNEATI--DMADYLDFLATDPDTSAIGLVVE----GIRRPAEFFRAARR 237 Query: 233 -RGRKKPIVGFVAGKTAP-PGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 KPIV + + H GA+ G A + ++ GI +A + Sbjct: 238 CIAAGKPIVALKLARNSRTQQMAASHTGALA----GNAWAYDVSFRQVGIQLAYDLEELV 293 Query: 291 RSLV 294 L Sbjct: 294 DRLA 297 >gi|238759748|ref|ZP_04620907.1| hypothetical protein yaldo0001_7610 [Yersinia aldovae ATCC 35236] gi|238702074|gb|EEP94632.1| hypothetical protein yaldo0001_7610 [Yersinia aldovae ATCC 35236] Length = 880 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 95/281 (33%), Gaps = 29/281 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHP-KKG--STYWTGGNVNVPVFTTVAEAKERTAANASV 75 +AG + + + P K ++P+ + ++ Sbjct: 26 RAGFLMMRNLLDGGFNGPILPVTPSHKAVCGVLAYANIASLPI-----------TPDLAI 74 Query: 76 IYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTP 135 + + + ++ ++ + KA ++ RL+GPN G+L P Sbjct: 75 LCTHDRRNLSLLEDLGTRGCKAVIILSAATEQFPEL--KACAQRHHMRLLGPNSLGLLAP 132 Query: 136 DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 +KG + +S+S + + Q +G S + +G + + Sbjct: 133 WQGLNASFSPVPIKKGRLAFISQSAAVANTVLDWAQQREVGFSYFIALGDSLDIDVDDL- 191 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 L+ D T +I++ E +A +FL R KP++ +G++ Sbjct: 192 -LDFLARDGKTSAIMLYIEHIS----DARRFLSASRSASRNKPVLVVKSGRSQ------- 239 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A ++ G +G A++ AG+ + ++ L Sbjct: 240 RAQQLLGGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETL 280 >gi|330007670|ref|ZP_08306010.1| CoA binding domain protein [Klebsiella sp. MS 92-3] gi|328535393|gb|EGF61874.1| CoA binding domain protein [Klebsiella sp. MS 92-3] Length = 883 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 94/279 (33%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVMPVTPAWKA----VLGGLAWPTIESLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + + + ++ + + RL+GPN G+L P Sbjct: 77 TNARRNLELLEALGQKGCKTCIILSSQPEQYPAL--LECAARYQMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 +G + +S+S ++ + Q +G S + +G + + L Sbjct: 135 GLNASFSPVPIHRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + HA Sbjct: 193 DFLARDSKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQKLLHA 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + A++ AG+ + ++ L Sbjct: 248 NSGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|293606699|ref|ZP_06689053.1| acetyl-CoA synthetase [Achromobacter piechaudii ATCC 43553] gi|292814912|gb|EFF74039.1| acetyl-CoA synthetase [Achromobacter piechaudii ATCC 43553] Length = 708 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 92/260 (35%), Gaps = 26/260 (10%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 I+PK + + V E + +++ + AI E E Sbjct: 44 PINPK------ASEIAGLRCYPDVRSLPEAP--DVAIVLLGAERTQQAIRELAELGTGAA 95 Query: 99 VCITEGIPVLDMVRVKARLE----KSSSRLIGPNCPGILT----PDSCKIGIMPGSIFRK 150 + + G + + E R++GPN G++ G + Sbjct: 96 IVLASGYSETGDEGARRQRELREAAGGMRILGPNTIGLVNLTDRITLSASGALELDQLHS 155 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G+VG++S+SG + + + + G+G S + + + D ++ + D AT I Sbjct: 156 GAVGLVSQSGGILGALLSRAAARGIGFSKLISTSNE--VDLDLADFVDALVDDPATHVIA 213 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + E + A K A KPIV F G++ A A +G GA+ Sbjct: 214 LYVESIRNPRTFRAAARKATAAG---KPIVAFKIGRSESGA----QAAASHTGALAGADA 266 Query: 271 KINA-MKEAGICIAPSPARI 289 +A E GI A + + Sbjct: 267 MYDALFDETGIIRAQMFSDL 286 >gi|256396545|ref|YP_003118109.1| CoA-binding domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256362771|gb|ACU76268.1| CoA-binding domain protein [Catenulispora acidiphila DSM 44928] Length = 707 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 53/233 (22%), Positives = 90/233 (38%), Gaps = 19/233 (8%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSR 123 V+ VP + + + E++ IV +T G V R+ + + Sbjct: 68 PVGLVVVSVPAAVYEETVEEALACGASAIVAVTAGFAETGADGLARQRAVAERVRAAGAV 127 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 L+GPNC GI + + F G V +LS+SG L E + GLG S V + Sbjct: 128 LVGPNCLGIADNTTELY--LASDAFDLGGVALLSQSGNLALELQLSFAPHGLGFSRFVSL 185 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G +D++E EAT++I + E G AA A K ++ Sbjct: 186 GNQ--SDVTLVDLVEDCARHEATQAIAVYAEDFGDGRAFAA-----AAAAAGKAVVLLSA 238 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 +A H GA+ + ++ A ++AG+ + +P + L + Sbjct: 239 GRGSAAARSAASHTGALTT----SSDIVAAACRDAGVELVRTPREMTAVLAAV 287 >gi|218692115|ref|YP_002400327.1| putative succinyl-CoA synthetase subunit alpha [Escherichia coli ED1a] gi|218429679|emb|CAR10643.2| Putative enzyme, Putative Succinyl-CoA synthetase, alpha subunit [Escherichia coli ED1a] Length = 519 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 79/182 (43%), Gaps = 11/182 (6%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 AN ++I VP A I+++ + ++ ++ + + +K + ++G Sbjct: 111 AEPEANLALISVPGDYAAAEAIKALNLGMN-VMMFSDNVSIGQEKSIKTLARERQRIVMG 169 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+C + I + ++ ++G++G++ SGT E + Q G G S A+G GG Sbjct: 170 PDCGTAIVNG---IPLGFANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGH 226 Query: 187 P----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + G + L+ D+ T IV++ + A+ + + A+ K +V F Sbjct: 227 DLSEEIGGISMLFALDALAQDDETRVIVLISKPPSPI---VARTILERAEACGKPVVVNF 283 Query: 243 VA 244 + Sbjct: 284 LG 285 >gi|331649667|ref|ZP_08350749.1| FdrA [Escherichia coli M605] gi|330908143|gb|EGH36662.1| protein fdrA [Escherichia coli AA86] gi|331041537|gb|EGI13685.1| FdrA [Escherichia coli M605] Length = 519 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 79/182 (43%), Gaps = 11/182 (6%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 AN ++I VP A I+++ + ++ ++ + + +K + ++G Sbjct: 111 AEPEANLALISVPGDYAAAEAIKALNLGMN-VMMFSDNVSIGQEKSIKTLARERQRIVMG 169 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+C + I + ++ ++G++G++ SGT E + Q G G S A+G GG Sbjct: 170 PDCGTAIVNG---IPLGFANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGH 226 Query: 187 P----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + G + L+ D+ T IV++ + A+ + + A+ K +V F Sbjct: 227 DLSEEIGGISMLFALDALAQDDETRVIVLISKPPSPI---VARTILERAEACGKPVVVNF 283 Query: 243 VA 244 + Sbjct: 284 LG 285 >gi|323189745|gb|EFZ75024.1| protein fdrA [Escherichia coli RN587/1] Length = 519 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 79/182 (43%), Gaps = 11/182 (6%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 AN ++I VP A I+++ + ++ ++ + + +K + ++G Sbjct: 111 AEPEANLALISVPGDYAAAEAIKALNLGMN-VMMFSDNVSIGQEKSIKTLARERQRIVMG 169 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+C + I + ++ ++G++G++ SGT E + Q G G S A+G GG Sbjct: 170 PDCGTAIVNG---IPLGFANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGH 226 Query: 187 P----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + G + L+ D+ T IV++ + A+ + + A+ K +V F Sbjct: 227 DLSEEIGGISMLFALDALAQDDETRVIVLISKPPSPI---VARTILERAEACGKPVVVNF 283 Query: 243 VA 244 + Sbjct: 284 LG 285 >gi|257094019|ref|YP_003167660.1| GCN5-like N-acetyltransferase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046543|gb|ACV35731.1| GCN5-related N-acetyltransferase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 887 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 42/290 (14%), Positives = 94/290 (32%), Gaps = 30/290 (10%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+ + V + +K S +W G +V + V + +++ Sbjct: 25 GRYAEVVLANLAAGGFSGPVISVSARKRSLFWIGADVRIDDMAVV--------PDLAIVC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVC-------ITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 I + ++ ++ + + R++GP Sbjct: 77 AALDKVPSIIEQLGARGTRAVIVGPWLWHRMSSSQILAARKAILEAARPYLMRVLGPGSG 136 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 GI+ P G + ++S+S +T + + S +G+G S+ + +G Sbjct: 137 GIVVPARGLNASAAPVSITPGKIALVSQSTAVTAAILDRASSKGIGFSSVLHLGAS--ID 194 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 + D L+ D T+SI++ + +F+ R KP+V Sbjct: 195 IDLADALDWLAGDPDTKSILVQFDSLPPG----RKFMSAARAAARNKPVVSIR------- 243 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 GR + ++ E A++ AG + + + E + + Sbjct: 244 GRRV-DTRSMPGAPFSVDEVYEAALRRAGWVHIDNLGDLFEA-AEAMARV 291 >gi|332284659|ref|YP_004416570.1| CoA-binding domain-containing protein [Pusillimonas sp. T7-7] gi|330428612|gb|AEC19946.1| CoA-binding domain-containing protein [Pusillimonas sp. T7-7] Length = 696 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 100/304 (32%), Gaps = 31/304 (10%) Query: 4 LVDKNTKVLVQGLTG---KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 ++ K + V V G +G K G + + + + I+P + + + Sbjct: 9 ILTKPSSVAVIGASGDKDKVGGRPVDYLKRFGFSGSIYPINPTR------DVVQGIKCYP 62 Query: 61 TVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVK 114 + E + +VI + A+ E + V ++ G + ++ Sbjct: 63 NLRALPE--TPDLAVIALAGPAVKAAVQVCAEGGVKAAVIMSSGFGETGSEGEAEQRQLI 120 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAVFQT 170 + R+IGPN G+ + + + G V ++S+SG Sbjct: 121 QIAAAAGMRIIGPNAQGVANFQNGMVANFSTMFTQLDPCDGPVAVVSQSGATGAAIYTML 180 Query: 171 SQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 + G+G + G + ++ L D +V+ E + A Sbjct: 181 RERGIGVRYVMTSGNEA--DITVSELALSILDDPGIRILVLYMESIKDPDLLAK---AAA 235 Query: 231 AKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM-KEAGICIAPSPARI 289 R R I+ AG++ A +G G + ++A + I A ++I Sbjct: 236 LARTRGVCILAVKAGRSVMGA----AAAQSHTGALAGEDRVVDAFLRRHSIWRADDISQI 291 Query: 290 GRSL 293 + L Sbjct: 292 SQVL 295 >gi|241762765|ref|ZP_04760829.1| CoA-binding domain protein [Acidovorax delafieldii 2AN] gi|241368184|gb|EER62376.1| CoA-binding domain protein [Acidovorax delafieldii 2AN] Length = 692 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 84/261 (32%), Gaps = 23/261 (8%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 ++ G I+P G P ++ E + + P A+ E Sbjct: 43 RSGFAGRIYPINPKRAEIQGLRAWPSLQSLPEV-----PDQVFVLTPTDTVIPAVRECAA 97 Query: 93 AEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCK----IGI 142 + ++ + G ++ ++ R++GP+ G++ P + Sbjct: 98 VGVKVVTVLASGFSESGTEGVQREEELRQIARETGIRILGPSSLGVVNPRTGLVLTANAA 157 Query: 143 MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA 202 G V + S SG++ V + G+G + V +G + ++ L Sbjct: 158 FAEPDIPPGKVFVASHSGSMIGALVSRGKARGVGFAGLVSVGSE--VDLNVGEICSATLD 215 Query: 203 DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 D A E ++ E E A KP++ + G++A I+ Sbjct: 216 DPAIEGYLLFLESMRHGPELRAFARAAHRAG---KPVIAYKLGRSAAAAEMATTHTGAIA 272 Query: 263 GGKGGAEDKINAMKEAGICIA 283 G A+ K+ GI Sbjct: 273 GEDDIAD---AFFKDLGIARV 290 >gi|324007497|gb|EGB76716.1| bacterial FdrA protein [Escherichia coli MS 57-2] Length = 519 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 79/182 (43%), Gaps = 11/182 (6%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 AN ++I VP A I+++ + ++ ++ + + +K + ++G Sbjct: 111 AEPEANLALISVPGDYAAAEAIKALNLGMN-VMMFSDNVSIGQEKSIKTLARERQRIVMG 169 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+C + I + ++ ++G++G++ SGT E + Q G G S A+G GG Sbjct: 170 PDCGTAIVNG---IPLGFANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGH 226 Query: 187 P----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + G + L+ D+ T IV++ + A+ + + A+ K +V F Sbjct: 227 DLSEEIGGISMLFALDALAQDDETRVIVLISKPPSPI---VARTILERAEACGKPVVVNF 283 Query: 243 VA 244 + Sbjct: 284 LG 285 >gi|332341881|gb|AEE55215.1| membrane protein FdrA [Escherichia coli UMNK88] Length = 555 Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ ++I V A + ++++ + ++ ++ + + D +++K+R + Sbjct: 110 SACQKLPDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKSRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|94309787|ref|YP_582997.1| CoA-binding [Cupriavidus metallidurans CH34] gi|93353639|gb|ABF07728.1| Putative acetyl-CoA synthetase (CoA-binding domain) [Cupriavidus metallidurans CH34] Length = 700 Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 38/268 (14%), Positives = 88/268 (32%), Gaps = 27/268 (10%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P G + + V + E + +V+ + + I Sbjct: 39 YAGAVYPVNPKYENVFG---LRCYRQVEDLPE--GIDLAVLAIAAEDVTAMLKRCHARGI 93 Query: 96 PLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG---- 145 + G ++A +++S + GPNC G ++ Sbjct: 94 RAAIVYAAGFAEAGESGAALQDIMEAYVKESGMLVAGPNCMGFANLNTHAYTAFASVFKT 153 Query: 146 --SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLAD 203 + +G V +L++SG + + G+ S + G + LE D Sbjct: 154 APAQTERGRVSLLTQSGNVCAAVFAIARELGVPFSQFINTGNEACIDYSA--YLEYLAQD 211 Query: 204 EATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRTMGHAGAVIS 262 T+ ++ E + A+F++ + KP++ + AG+T + + ++ Sbjct: 212 PQTDVVIGYIEEL----RDGARFIEAASACAEADKPLIIYKAGETDKGREAVRSHTSALA 267 Query: 263 GGKGGAEDKINAMKEAGICIAPSPARIG 290 G + A + + A++ Sbjct: 268 GNQAIYR---AAFSQLNVIECQDFAQMA 292 >gi|312880794|ref|ZP_07740594.1| FdrA family protein [Aminomonas paucivorans DSM 12260] gi|310784085|gb|EFQ24483.1| FdrA family protein [Aminomonas paucivorans DSM 12260] Length = 510 Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 86/182 (47%), Gaps = 11/182 (6%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPN 128 AN +++ V AGD +E + ++ ++ ++ + + V +K + ++GP+ Sbjct: 113 PEANLAIVSVAGRYAGDVALECLGRDLN-VMLYSDNVSLEKEVEIKKVAREKGLLVMGPD 171 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 C I+ + + + G V +++ +GT E Q ++ G+G +G GG V Sbjct: 172 CGTIIVRG---VAMGMANACPTGPVSLVAAAGTGLQEVHVQLAKRGVGTLHGIGTGGRDV 228 Query: 189 ---KGTEFIDV-LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 G +++ ++ LAD+ + +V+VG+ E Q + + + G K ++GF+ Sbjct: 229 KAEVGGLMVEMGVQTLLADDEVKVLVVVGKPPAPEVE---QKILAQVRAGGKPAVLGFIG 285 Query: 245 GK 246 G+ Sbjct: 286 GE 287 >gi|296139743|ref|YP_003646986.1| CoA-binding protein [Tsukamurella paurometabola DSM 20162] gi|296027877|gb|ADG78647.1| CoA-binding domain protein [Tsukamurella paurometabola DSM 20162] Length = 727 Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 104/299 (34%), Gaps = 31/299 (10%) Query: 1 MSILVDKNTKVLVQGLTGKA--GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPV 58 M+ L D + +V T A G + ++P+ + + V Sbjct: 20 MARLFDPRSIAVVGASTDPAKRGYQSIRALQRSGYRHPIHPVNPR------ATRILGLDV 73 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVR 112 +V E + ++I +P DA+ I V + G Sbjct: 74 APSVEELPR--DIDVALIALPGPLVPDALRACAGVGIRSAVVLANGFKESGHAGAALEAE 131 Query: 113 VKARLEKSSSRLIGPNCPGILTP--DSCKIGIMPGSIFRKGSVGILSRSGT-LTYEAVFQ 169 + A + ++ R+IGPN GI+ + +G++ +G + ++++SG L Sbjct: 132 LAAVIAETGIRVIGPNTSGIINASTGANLVGLL---DIPQGPISVVTQSGNMLLSLVNDD 188 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + +G G G+G + D L D+ T +I + E + FL Sbjct: 189 RALQGPGFHVYAGLGNQ--VDVSYADCLTAMAEDDQTGAIAVHAE----GLIDGRGFLVA 242 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 A+ P+V G++ RT ++G A +++AG+ + Sbjct: 243 AARAVADTPVVMVRGGRSEIGRRTALSHTGSVAGSDAVATAV---LRQAGVELVDRSDE 298 >gi|301025715|ref|ZP_07189230.1| bacterial FdrA protein [Escherichia coli MS 69-1] gi|300395838|gb|EFJ79376.1| bacterial FdrA protein [Escherichia coli MS 69-1] Length = 519 Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 79/182 (43%), Gaps = 11/182 (6%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 AN ++I VP A I+++ + ++ ++ + + +K + ++G Sbjct: 111 AEPEANLALISVPGDYAAAEAIKALNLGMN-VMMFSDNVSIAQEKSIKILARERQRIVMG 169 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+C + I + ++ ++G++G++ SGT E + Q G G S A+G GG Sbjct: 170 PDCGTAIVNG---IPLGFANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGH 226 Query: 187 P----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + G + L+ D+ T IV++ + A+ + + A+ K +V F Sbjct: 227 DLSEEIGGISMLFALDALAQDDETRVIVLISKPPSPI---VARTILERAEACGKPVVVNF 283 Query: 243 VA 244 + Sbjct: 284 LG 285 >gi|188533072|ref|YP_001906869.1| Putative acyl-CoA synthetase [Erwinia tasmaniensis Et1/99] gi|188028114|emb|CAO95971.1| Putative acyl-CoA synthetase [Erwinia tasmaniensis Et1/99] Length = 889 Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 85/226 (37%), Gaps = 15/226 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + +V+ + + E + ++ P + +KA + RL+GPN Sbjct: 70 PDLAVLCTHGRRNLELLRALGERGCKACIVLSA--PRDQLPELKACASRWQIRLLGPNSL 127 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G+L P R G + +S+S ++ + Q G S + +G Sbjct: 128 GLLAPWQGLNASFSPVPIRPGKLAFISQSSAVSNTILDWAQQRQQGFSWFIALGDSLDID 187 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 + + L+ D T +I++ E +A +F+ R KPIV +G++ P Sbjct: 188 ADDL--LDFLARDGKTSAILLYLEQLS----DARRFVSAARSASRNKPIVVIKSGRS-PQ 240 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + + GG A D A++ AG+ + ++ L Sbjct: 241 AQRLLNT----QGGMDAAWD--AAIQRAGLLRVQDTHELFSAVETL 280 >gi|312970613|ref|ZP_07784794.1| protein fdrA [Escherichia coli 1827-70] gi|310337262|gb|EFQ02400.1| protein fdrA [Escherichia coli 1827-70] Length = 555 Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTLLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|329938559|ref|ZP_08287984.1| acyl-CoA synthetase [Streptomyces griseoaurantiacus M045] gi|329302532|gb|EGG46423.1| acyl-CoA synthetase [Streptomyces griseoaurantiacus M045] Length = 900 Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 101/270 (37%), Gaps = 19/270 (7%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G G T + ++P + VP + TV A + V+ Sbjct: 212 GSVGRALLHHLREDGFTGRLFAVNPG------AEAILGVPSYPTVGALP--VAPDLVVVA 263 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD- 136 VP E +A + +V ++ G+ + R++GPNC GI D Sbjct: 264 VPADAVPALAEECGKAGVRSLVVVSAGLDAAQAAALLTACRSHGMRMVGPNCLGIANTDP 323 Query: 137 SCKI-GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 SC++ + R G+ G+ +SG + + S+ G+G ST +G D Sbjct: 324 SCRVDATFAATHPRAGTAGVAVQSGGVGIALLEGLSRLGIGVSTFASLGDK--YDVSGND 381 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 +L+ + +D T+ ++ E G+ A F + + R+ P++ AG+T R Sbjct: 382 MLQWWESDGRTDLALLHLESFGNP----AAFSRTARRVTRRLPVLTVDAGRTDAGRRAA- 436 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPS 285 + + G + +AGI S Sbjct: 437 --ASHTAAAATGTMTRRALFTQAGITATRS 464 >gi|256023865|ref|ZP_05437730.1| membrane protein FdrA [Escherichia sp. 4_1_40B] gi|301648565|ref|ZP_07248281.1| membrane protein FdrA [Escherichia coli MS 146-1] gi|301073384|gb|EFK88190.1| membrane protein FdrA [Escherichia coli MS 146-1] gi|315616542|gb|EFU97159.1| protein fdrA [Escherichia coli 3431] Length = 555 Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ ++I V A + ++++ + ++ ++ + + D +++K+R + Sbjct: 110 SACQKLPDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKSRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|218698883|ref|YP_002406512.1| membrane protein FdrA [Escherichia coli IAI39] gi|218368869|emb|CAR16619.1| putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli IAI39] Length = 555 Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 87/197 (44%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + EA + A + Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKAT 278 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 279 GKPTVALFLGYTPAVAR 295 >gi|91226139|ref|ZP_01261029.1| putative acetyltransferase [Vibrio alginolyticus 12G01] gi|91189373|gb|EAS75651.1| putative acetyltransferase [Vibrio alginolyticus 12G01] Length = 877 Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 92/249 (36%), Gaps = 30/249 (12%) Query: 57 PVFTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 P + V+ + +++ S + E E P + I++ LD Sbjct: 47 PRYKAVSGVIAYPDVASLPYTPDIAILCTNVSRNEQLLKELDERGTPFAIVISDDPNPLD 106 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 + + + R++GPN GI+ P + G + +S+S + + Sbjct: 107 ISSL-------NIRVLGPNSLGIILPWHNFNCTFSPVAAKPGKIAFISQSAAVCTTVLDW 159 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + + +G S+ + IG +F D+L+ D TE+I++ + ++A +F+ Sbjct: 160 ANDKNIGFSSFLSIGRGQ--DIDFADLLDYLSMDGNTEAILLYVDNI----QDARRFMSA 213 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPA 287 R + I+ AG++ G D I +A++ G+ + Sbjct: 214 ARAASRNRRILVLKAGRSKEM--------NTFEQQDGDTLDVIYDSAIRRTGMLRVSNTH 265 Query: 288 RIGRSLVEL 296 + ++ L Sbjct: 266 ELFAAVETL 274 >gi|307137161|ref|ZP_07496517.1| membrane protein FdrA [Escherichia coli H736] gi|331641040|ref|ZP_08342175.1| protein FdrA [Escherichia coli H736] gi|331037838|gb|EGI10058.1| protein FdrA [Escherichia coli H736] Length = 555 Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ ++I V A + ++++ + ++ ++ + + D +++K+R + Sbjct: 110 SACQKLPDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKSRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|189465170|ref|ZP_03013955.1| hypothetical protein BACINT_01515 [Bacteroides intestinalis DSM 17393] gi|189437444|gb|EDV06429.1| hypothetical protein BACINT_01515 [Bacteroides intestinalis DSM 17393] Length = 687 Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 96/276 (34%), Gaps = 36/276 (13%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAII 88 I T + ++PK V + V + + +++ + DA+ Sbjct: 33 INGGYTGELRAVNPK------ETEVQGVTAYADVKDI---PDTDMAILAISAQMCPDAVE 83 Query: 89 E-SIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIG 141 + E ++ + ++ G R+ + K + LIGPNC G++ + Sbjct: 84 VLAAEKQVRAFIILSAGFGEETHEGALLEDRILETVNKYGASLIGPNCIGLMNTWHHSVF 143 Query: 142 IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL-- 199 P V ++S SG + +GL ++ +G G E DVL+ Sbjct: 144 SQPIPQLHPQGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQYMD 201 Query: 200 --FLADEATESIVMVGEIGGSAEE---EAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTM 254 F D+ ++ ++ E G + A+ +K K K A + Sbjct: 202 ENFQPDKDSKIKLLYIESIGDPDRLLFHASSLIKKGCKIAAIK----------AGSSESG 251 Query: 255 GHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 A + +G ++ + A ++AGI S + Sbjct: 252 SRAASSHTGAIASSDSAVEALFRKAGIVRCYSREEL 287 >gi|238896033|ref|YP_002920769.1| putative NAD(P)-binding and ATP-binding acyl-CoA synthetase [Klebsiella pneumoniae NTUH-K2044] gi|238548351|dbj|BAH64702.1| putative NAD(P)-binding and ATP-binding acyl-CoA synthetase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 883 Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 94/279 (33%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVMPVTPAWKA----VLGVLAWPTIESLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + + + ++ + + RL+GPN G+L P Sbjct: 77 TNARRNLELLEALGQKGCKTCIILSSQPEQYPAL--LECAARYQMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 +G + +S+S ++ + Q +G S + +G + + L Sbjct: 135 GLNASFSPVPIHRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + HA Sbjct: 193 DFLARDSKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQKLLHA 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + A++ AG+ + ++ L Sbjct: 248 NSGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|269793016|ref|YP_003317920.1| CoA-binding domain-containing protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100651|gb|ACZ19638.1| CoA-binding domain protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 699 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 82/262 (31%), Gaps = 32/262 (12%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 GG++P GG P ++ + +++ V I I Sbjct: 43 YGGGVYPVNPKYDSIGGLRCYPDVGSIDG-----DVDVALVAVRAPLVPSVIEGCGRRGI 97 Query: 96 PLIVCITEGIPVLDMVRVKA----RLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI---- 147 V + G ++ ++ R++GPNC G++ G +P S Sbjct: 98 RFAVVFSSGFAEAGREDLQRELLEAADRWGVRILGPNCQGLVN----LAGGIPLSFSASL 153 Query: 148 -------FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 G + +S+SG + + G+ V G + ++V Sbjct: 154 DTDRLVGATPGGIAYVSQSGAFGFASFACAVDRGVRFRHVVTTGNQA--DLDTVEVAGCL 211 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAV 260 L D +++ E + ++ R R + AG++ R A Sbjct: 212 LEDPEVRMLLLYLEGVRDGDRLVELLIRA---RERDVTVGLIKAGRSETGSRAAQSHTAS 268 Query: 261 ISGGKGGAEDKINAMKEAGICI 282 ++G + M++ G + Sbjct: 269 VAGDQRVWGAV---MEQYGAVM 287 >gi|91213369|ref|YP_543355.1| hypothetical protein UTI89_C4407 [Escherichia coli UTI89] gi|117626101|ref|YP_859424.1| hypothetical protein APECO1_2634 [Escherichia coli APEC O1] gi|218560904|ref|YP_002393817.1| enzyme, Succinyl-CoA synthetase, alpha subunit [Escherichia coli S88] gi|237702855|ref|ZP_04533336.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|91074943|gb|ABE09824.1| hypothetical protein YahF [Escherichia coli UTI89] gi|115515225|gb|ABJ03300.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|218367673|emb|CAR05462.1| Putative enzyme, Putative Succinyl-CoA synthetase, alpha subunit [Escherichia coli S88] gi|226903026|gb|EEH89285.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|294491058|gb|ADE89814.1| protein FdrA [Escherichia coli IHE3034] gi|307628904|gb|ADN73208.1| Putative enzyme, Putative Succinyl-CoA synthetase, alpha subunit [Escherichia coli UM146] gi|315284731|gb|EFU44176.1| bacterial FdrA protein [Escherichia coli MS 110-3] gi|323949274|gb|EGB45164.1| FdrA protein [Escherichia coli H252] gi|323954051|gb|EGB49849.1| FdrA protein [Escherichia coli H263] Length = 519 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 79/182 (43%), Gaps = 11/182 (6%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 AN ++I VP A I+++ + ++ ++ + + +K + ++G Sbjct: 111 AEPEANLALISVPGDYAAAEAIKALNLGMN-VMMFSDNVSIGQEKSIKTLARERQRIVMG 169 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+C + I + ++ ++G++G++ SGT E + Q G G S A+G GG Sbjct: 170 PDCGTAIVNG---IPLGFANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGH 226 Query: 187 P----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + G + L+ D+ T IV++ + AQ + + A+ K +V F Sbjct: 227 DLSEEIGGISMLFALDALAQDDETRVIVLISKPPSPI---VAQTILERAEACGKPVVVNF 283 Query: 243 VA 244 + Sbjct: 284 LG 285 >gi|262040317|ref|ZP_06013568.1| GNAT family acetyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042426|gb|EEW43446.1| GNAT family acetyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 883 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 94/279 (33%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVMPVTPAWKA----VLGVLAWPTIESLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + + + ++ + + RL+GPN G+L P Sbjct: 77 TNARRNLELLEALGQKGCKTCIILSSQPEQYPAL--LECAARYQMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 +G + +S+S ++ + Q +G S + +G + + L Sbjct: 135 GLNASFSPVPIHRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + HA Sbjct: 193 DFLARDSKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQKLLHA 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + A++ AG+ + ++ L Sbjct: 248 NSGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|152971438|ref|YP_001336547.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956287|gb|ABR78317.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 883 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 94/279 (33%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVMPVTPAWKA----VLGVLAWPTIESLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + + + ++ + + RL+GPN G+L P Sbjct: 77 TNARRNLELLEALGQKGCKTCIILSSQPEQYPAL--LECAARYQMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 +G + +S+S ++ + Q +G S + +G + + L Sbjct: 135 GLNASFSPVPIHRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + HA Sbjct: 193 DFLARDSKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQKLLHA 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + A++ AG+ + ++ L Sbjct: 248 NSGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|325972420|ref|YP_004248611.1| hypothetical protein SpiBuddy_2606 [Spirochaeta sp. Buddy] gi|324027658|gb|ADY14417.1| protein of unknown function DUF1116 [Spirochaeta sp. Buddy] Length = 1039 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 79/170 (46%), Gaps = 14/170 (8%) Query: 58 VFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR 116 VF ++ +A + + N ++I VP + A ++++ + ++ ++ + + D + +K+R Sbjct: 102 VFCSIEDAVQAQEETNLAIISVPGAYAAHEAKKALDLGLN-VMIFSDNVTLEDEIALKSR 160 Query: 117 LEKSSSRLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 ++ ++GP+C + C ++P GS+G+++ SGT E ++ G Sbjct: 161 AQEKGLLVMGPDCGTAILGGKPLCFANVVPS-----GSIGVVAASGTGLQEVTCLLTRMG 215 Query: 175 LGQSTAVGIGGDP-----VKGTEFIDVLELFLADEATESIVMVGEIGGSA 219 G S A+G GG V G + + D TE IV+V + Sbjct: 216 CGISQAIGTGGRDLKNKAVGGRMMLMGITALGNDPNTELIVVVSKPPAPE 265 >gi|260430060|ref|ZP_05784035.1| CoA-binding domain protein [Citreicella sp. SE45] gi|260418983|gb|EEX12238.1| CoA-binding domain protein [Citreicella sp. SE45] Length = 361 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 64/305 (20%), Positives = 123/305 (40%), Gaps = 38/305 (12%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVG----GIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 V + G +G AG T + + + + G ++P + + +P F + + Sbjct: 22 VALIGASGSAGKL-TARPLEFLRKHGFGGRIFPVNPTR------SEVMGLPSFARLTDIP 74 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKS 120 E + + I + A A+ + A +P++ + +G R++ + + Sbjct: 75 E--PVDHAYILLDAEPAIAALKDCARAGVPVVTVLADGFAESGPEGRARQERLQRIAQDA 132 Query: 121 SSRLIGPNCPGILTPDSCK----IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLG 176 LIGPN G+++ + +G++ +LS+SG++ + + G Sbjct: 133 GILLIGPNSTGVVSTAAGFCCSTNAAFATDRLDRGNLAVLSQSGSIIGTLLSRGQARGCA 192 Query: 177 QSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 ST V +G + G + +L L D AT+ ++ E E AA GR Sbjct: 193 FSTLVSVGNEA--GAGIGQLGQLLLDDPATDGFLLFMETIRDREALAAFA---RGAAGRG 247 Query: 237 KPIVGFVAGKTAPPGRTMG--HAGAVISGGKGGAEDKINAMKEAGICIAPSPARI---GR 291 KP+V ++ G++ GR + H GA+ G AE ++ GI A S + R Sbjct: 248 KPVVAYMIGRS-DEGRALSVLHTGALT----GAAEAVSAFLESIGIRQAESLDTLMDAPR 302 Query: 292 SLVEL 296 L ++ Sbjct: 303 LLSKM 307 >gi|262395456|ref|YP_003287309.1| protein acetyltransferase [Vibrio sp. Ex25] gi|262339050|gb|ACY52844.1| protein acetyltransferase [Vibrio sp. Ex25] Length = 877 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 92/249 (36%), Gaps = 30/249 (12%) Query: 57 PVFTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 P + V+ + +++ S + E E P + I++ L+ Sbjct: 47 PRYKAVSGVIAYPDVASLPYTPDIAILCTNVSRNEQLLKELDERGTPFAIVISDDAQPLN 106 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 + + + R++GPN GI+ P + G + +S+S + + Sbjct: 107 ISSL-------NIRVLGPNSLGIILPWHKFNCTFSPVAAKPGKIAFISQSAAVCTTVLDW 159 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + + +G S+ + IG +F D+L+ D TE+I++ + ++A +F+ Sbjct: 160 ANDKNIGFSSFISIGRGQ--DIDFADLLDYLSMDGNTEAILLYVDNI----QDARRFMSA 213 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPA 287 R + I+ AG++ G D I +A++ G+ + Sbjct: 214 ARAASRNRRILVLKAGRSKEM--------NTFEQQDGDTLDVIYDSAIRRTGMLRVSNTH 265 Query: 288 RIGRSLVEL 296 + ++ L Sbjct: 266 ELFAAVETL 274 >gi|311108632|ref|YP_003981485.1| ATP-grasp domain-containing protein 3 [Achromobacter xylosoxidans A8] gi|310763321|gb|ADP18770.1| ATP-grasp domain protein 3 [Achromobacter xylosoxidans A8] Length = 711 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 106/297 (35%), Gaps = 36/297 (12%) Query: 11 VLVQGLTGKAGTF-HTEQAILYCQTQVVG---GIHPKKGSTYWTGGNVNVPVFTTVAEAK 66 V++ G + K GT HT + + G ++P KG + P+ +V A Sbjct: 26 VMIVGASSKPGTLGHTTVVNVLEHSDFDGEVHLVNP-KGGELFGK-----PLHASVD-AV 78 Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKS 120 + +++ VP A + E + + T G L + A ++S Sbjct: 79 PVHGIDVALLLVPAESAVATLRACAEKGVRYAIVFTGGFAELGEAGRSVEAEMLALAQRS 138 Query: 121 SSRLIGPNCPGILTPDSCKIGIMPGSIFRK-------GSVGILSRSGTLTYEAVFQTSQE 173 RL GPNC G+ + ++G+ + FR +G++++ G L + Q ++ Sbjct: 139 GMRLYGPNCAGMTML-APRLGLTFSTEFRNDGRTGKLSRIGLVTQGGGLGRSLM-QGNER 196 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 G+ S G + + D + D T+ I V E S A R Sbjct: 197 GVCFSRWFSTGNE--LDLDSADFINWLAHDPGTDLICTVMEGIRSG---PRFIAAAAAAR 251 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 KP++ G++ + A + G + +A + G+ + Sbjct: 252 RAGKPLIALKIGRSDFGKK----AAQSHTASLAGEDAVNDAVFSQYGVIRVEDLDEL 304 >gi|158520603|ref|YP_001528473.1| CoA-binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158509429|gb|ABW66396.1| CoA-binding domain protein [Desulfococcus oleovorans Hxd3] Length = 705 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 92/274 (33%), Gaps = 26/274 (9%) Query: 37 VGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIP 96 + ++P G P F + EA + V V ++ +A Sbjct: 265 IPTVYPINPKLKTVQGLTCYPDFDALPEA-----PDLGVFAVNAEATVESFERFCKAGGR 319 Query: 97 LIVCITEGIPVLDMVRVKARL----EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR--- 149 + ++G + ++ RL + IGPNC G++ + K+ + R Sbjct: 320 GAIIFSDGFAEIGRKDLEERLLELSIQYDVAYIGPNCMGVID-NFSKVNTLFIPEHRTSV 378 Query: 150 ---KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 +GI+S+SG + E + + L V G G ++L D Sbjct: 379 IRGSSGIGIISQSGGVGLELMEMMEADNLDLGMWVSCGNASSVGV--AEILAHMGNDPRI 436 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKG 266 + I + E + + ++ KKP++ G T+ H ++ G Sbjct: 437 KVIAIYMEGF----DNGLKLMQVGKTVSAKKPVLVIKGGTGGGAAATLSHTASLA----G 488 Query: 267 GAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 E ++AG + + LV +L L Sbjct: 489 SHEAFKACCRQAGFYLVEELTEDPKVLVNILSML 522 >gi|284920328|emb|CBG33388.1| FdrA protein [Escherichia coli 042] Length = 555 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|289807664|ref|ZP_06538293.1| succinyl-CoA synthetase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 81 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 44/85 (51%), Positives = 60/85 (70%), Gaps = 4/85 (4%) Query: 214 EIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN 273 EIGGSAEEEAA ++KD KP+VG++AG TAP G+ MGHAGA+I+GGKG A++K Sbjct: 1 EIGGSAEEEAAAYIKDHV----TKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFA 56 Query: 274 AMKEAGICIAPSPARIGRSLVELLG 298 A++ AG+ S A IG +L ++ Sbjct: 57 ALEAAGVKTVRSLADIGEALKAIIK 81 >gi|328956431|ref|YP_004373817.1| hypothetical protein DUF1116 [Carnobacterium sp. 17-4] gi|328672755|gb|AEB28801.1| hypothetical protein DUF1116 [Carnobacterium sp. 17-4] Length = 1002 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 14/189 (7%) Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGP 127 +T AN ++I VP A D I ++++ + + ++ + D VR+K + + ++GP Sbjct: 112 QTDANIALISVPGIYASDEIEKALDNNLH-VFVFSDNVSKADEVRLKKKAHEKGLLVMGP 170 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 +C + I + ++ + G++GI+ SGT E + G G A+G GG Sbjct: 171 DCGTGII---SNIPMAFTNVVKSGNIGIVGASGTGIQEVTTIIDRLGGGVIHAIGTGGRD 227 Query: 188 ----VKGTEFIDVLELFLADEATESIVMVGEIGGSA-EEEAAQFLKDEAKRGRKKPIVGF 242 V D L E T+ IV++ + A +E Q L D KP+V Sbjct: 228 LSEEVGAITMKDALIGLAEHEPTDVIVVISKPPAPAVRDEVVQLLHDL-----PKPVVAI 282 Query: 243 VAGKTAPPG 251 G+ Sbjct: 283 FVGENPDHH 291 >gi|299821291|ref|ZP_07053179.1| conserved hypothetical protein [Listeria grayi DSM 20601] gi|299816956|gb|EFI84192.1| conserved hypothetical protein [Listeria grayi DSM 20601] Length = 996 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 76/187 (40%), Gaps = 12/187 (6%) Query: 65 AKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL 124 K AN ++I V + A I +++ + V ++ +P + VR+K + + + Sbjct: 111 LKALPDANLALISVAGTYAAAEIENALDNGLNAFV-FSDNVPKEEEVRLKKKAHEKGLLV 169 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 +GP+C L I + ++ R G++ I+ SGT E + G G + A+G G Sbjct: 170 MGPDCGTGLIGG---IPLAFTNVIRPGNISIVGASGTGIQEVSTIIDRLGGGVTHAIGTG 226 Query: 185 GDPVKG----TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 G + D L + TE IV++ + + L G KP+V Sbjct: 227 GRDLSDEVGAITMKDTLLALAEHDPTEVIVVISKPPAKEVRDEVVTLLH----GIDKPVV 282 Query: 241 GFVAGKT 247 G+ Sbjct: 283 AVFLGEN 289 >gi|323972171|gb|EGB67383.1| FdrA protein [Escherichia coli TA007] Length = 514 Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ ++I V A + ++++ + ++ ++ + + D +++K+R + Sbjct: 110 SACQKLPDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKSRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|256391065|ref|YP_003112629.1| FdrA family protein [Catenulispora acidiphila DSM 44928] gi|256357291|gb|ACU70788.1| FdrA family protein [Catenulispora acidiphila DSM 44928] Length = 629 Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 16/213 (7%) Query: 41 HPKKGSTYWTGGNV-----NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 P+ G + G+ + P T A A RT+A ++I P + +ES+E Sbjct: 114 TPQPGGSITAPGHPHQGRPDQPAPRTTATALGRTSAPITLISTPGLASVAEAMESLEYGA 173 Query: 96 PLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGI 155 I ++ IP+ VR+K + ++GP+C ++ + G+ +I R G + + Sbjct: 174 SPI-IFSDNIPIHHEVRLKEEARRRGLLVMGPDCGTVVLHGT---GLAFATIVRPGPISL 229 Query: 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVM 211 ++ SGT + + G G +G+GG V G + L D ATE I + Sbjct: 230 VAASGTGAQQLMALLDAAGTGIHHCLGVGGRDLTEQVAGRSTLAALTALADDPATELITV 289 Query: 212 VGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 V + A ++ A K FV Sbjct: 290 VSKP---PHPTIAAKIQAHAATLGKPVHFAFVG 319 >gi|331651478|ref|ZP_08352498.1| protein FdrA [Escherichia coli M718] gi|331050751|gb|EGI22808.1| protein FdrA [Escherichia coli M718] Length = 555 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 87/197 (44%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + EA + A + Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKAT 278 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 279 GKPTVALFLGYTPAVAR 295 >gi|326383150|ref|ZP_08204839.1| acid--CoA ligase [Gordonia neofelifaecis NRRL B-59395] gi|326198286|gb|EGD55471.1| acid--CoA ligase [Gordonia neofelifaecis NRRL B-59395] Length = 667 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 49/230 (21%), Positives = 85/230 (36%), Gaps = 16/230 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + VP G + E++ + + IT GI + R+ + +RL+G N Sbjct: 63 PELVALCVPGPMVGAVVDEALALGVKGFLGITAGIEDEPAIAA--RIRAAGARLVGGNSL 120 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 GI + F GS+ I+S+SG L E Q G+G S V IG Sbjct: 121 GIFDAAGEL--DLSWGTFTPGSMAIVSQSGQLGSELARLGEQNGIGVSRFVSIGNQ--ND 176 Query: 191 TEFIDVLELFLADEATESIVMVGEI--GGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 ++L + T + + E GG A +A + L++ K+ + AG Sbjct: 177 VTAAELLLDLAGHDDTRVVALYLESFDGGEAVFDALRALREAGKQTILLTVGSSAAGSRL 236 Query: 249 PPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 H G++ + + + G+ A SPA + ++ Sbjct: 237 ----ARSHTGSLTAP----VDVVDAVCRATGVLRAHSPAEVIDVARTVIA 278 >gi|157160041|ref|YP_001457359.1| membrane protein FdrA [Escherichia coli HS] gi|300903211|ref|ZP_07121141.1| membrane protein FdrA [Escherichia coli MS 84-1] gi|301301674|ref|ZP_07207809.1| membrane protein FdrA [Escherichia coli MS 124-1] gi|157065721|gb|ABV04976.1| bacterial FdrA protein [Escherichia coli HS] gi|300404730|gb|EFJ88268.1| membrane protein FdrA [Escherichia coli MS 84-1] gi|300843171|gb|EFK70931.1| membrane protein FdrA [Escherichia coli MS 124-1] gi|315256347|gb|EFU36315.1| membrane protein FdrA [Escherichia coli MS 85-1] Length = 555 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|311108110|ref|YP_003980963.1| ATP-grasp domain-containing protein 2 [Achromobacter xylosoxidans A8] gi|310762799|gb|ADP18248.1| ATP-grasp domain protein 2 [Achromobacter xylosoxidans A8] Length = 710 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 53/286 (18%), Positives = 95/286 (33%), Gaps = 29/286 (10%) Query: 18 GKAGTFHTEQAILYCQTQV-VGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVI 76 G G E +++ Q + ++P + P +V + + + +++ Sbjct: 30 GSIGQRTLENLMVHSGWQGRLSLVNPARQ------SIAGRPCAPSVRDLDQPH--DVAIL 81 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCP 130 V D + + E + + G ++ + + R+ GPN P Sbjct: 82 AVRAELVLDTLRQCGECGTRYAIVFSSGFGETGDAGRALEAEMRKIVADTGMRIYGPNSP 141 Query: 131 GILTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 G+ + ++G+ FR G +G+ S+ G L + Q G+G G + Sbjct: 142 GLTNVN-GRLGMSFSPAFRTDQRPGPIGVASQGGGLGRSFI-QAMDRGVGTGLWFSGGNE 199 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 E D + E IV V E A L + KPIV GK Sbjct: 200 A--DLEVSDYIHYMADAPDIEVIVSVLEGVRDGPRFMAAALHAARRG---KPIVALKVGK 254 Query: 247 TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 + + A IS G AE KE G+ ++ + Sbjct: 255 SDYGIKATQSHTAAIS---GSAEINSAVFKEVGVIEVDDVDQLIDT 297 >gi|238893479|ref|YP_002918213.1| membrane protein FdrA [Klebsiella pneumoniae NTUH-K2044] gi|238545795|dbj|BAH62146.1| multicopy suppressor [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 555 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 13/207 (6%) Query: 51 GGNVNVPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 G + ++ V A ++ AN ++I V A + +++ +E ++ ++ + + D Sbjct: 97 GQSQSLNVVRRWQSAMQKLPQANMTLISVAGEYAAELAHQALSSE-KSVMIFSDNVTLED 155 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 + +K R + ++GP+C + + ++ +G++G++ SGT E V Q Sbjct: 156 EIALKTRAREKGLLVMGPDCGTAMIAGTPLA---FANVTPEGNIGVIGASGTGIQELVSQ 212 Query: 170 TSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + G G S A+G+GG V G LE+ D ++ + V + +E Sbjct: 213 IALGGEGISHAIGLGGRDLSAEVGGLSAQTALEMLTQDAQSQVLAFVSKP---PDEAVRL 269 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGR 252 + + KR KP+V G +P R Sbjct: 270 KIINAMKRSA-KPVVALFLGYVSPVNR 295 >gi|226940229|ref|YP_002795303.1| YahF/FdrA-like protein [Laribacter hongkongensis HLHK9] gi|226715156|gb|ACO74294.1| YahF/FdrA-like protein [Laribacter hongkongensis HLHK9] Length = 512 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 91/230 (39%), Gaps = 15/230 (6%) Query: 44 KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITE 103 KG GG +P + + +N ++I VP + A +++ A + ++ ++ Sbjct: 89 KGGQS-AGGPAELPANSLTMALSRQPDSNLALISVPGAYATAEAEKALRAGLN-VMLFSD 146 Query: 104 GIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLT 163 + D R+K ++GP+C + + + ++ R G++G + SGT Sbjct: 147 NVSGEDERRLKQLATGLGRIVMGPDCGTAIIHG---VPLAFANVCRAGAIGCVGASGTGL 203 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSA 219 + G G S A+G GG V G + + D+AT IV+V + A Sbjct: 204 QQITTLIDTLGEGISQAIGTGGHDLAESVGGLSMLAGIRALAEDDATRVIVLVSKP--PA 261 Query: 220 EEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 E A + L G KP+V G A P R HA + A Sbjct: 262 EAVARKVLDAAIAAG--KPVVVNFLG--ADPARLPQHANLHYATTLESAA 307 >gi|193064144|ref|ZP_03045228.1| bacterial FdrA protein [Escherichia coli E22] gi|260842713|ref|YP_003220491.1| putative acyl-CoA synthetase [Escherichia coli O103:H2 str. 12009] gi|192929173|gb|EDV82783.1| bacterial FdrA protein [Escherichia coli E22] gi|257757860|dbj|BAI29357.1| predicted acyl-CoA synthetase [Escherichia coli O103:H2 str. 12009] Length = 555 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 85/187 (45%), Gaps = 12/187 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ + A+ ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLSDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEMLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAG 245 V G Sbjct: 282 TVALFLG 288 >gi|320174887|gb|EFW50007.1| Protein fdrA [Shigella dysenteriae CDC 74-1112] Length = 434 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ + AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLSDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q +Q G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIAQAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +G V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGERDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|167763879|ref|ZP_02436006.1| hypothetical protein BACSTE_02260 [Bacteroides stercoris ATCC 43183] gi|167697995|gb|EDS14574.1| hypothetical protein BACSTE_02260 [Bacteroides stercoris ATCC 43183] Length = 687 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 97/269 (36%), Gaps = 22/269 (8%) Query: 29 ILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAI- 87 I T + ++PK V + V + + +++ +P S DA+ Sbjct: 33 INGGYTGELRAVNPK------EAEVQGVTAYADVKDI---PDTDLAILAIPASFCPDAVE 83 Query: 88 IESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIG 141 + + E ++ + ++ G R+ + K + LIGPNC G++ + Sbjct: 84 LLAAEKQVRAFIILSAGFGEETHEGALLEDRILETVNKYGASLIGPNCIGLMNTWHHSVF 143 Query: 142 IMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFL 201 P V ++S SG + +GL ++ +G G E DVL+ Sbjct: 144 SQPIPNLNPQGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQYMD 201 Query: 202 ADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVI 261 E+ + + + + + L + RK + + ++ G A + Sbjct: 202 EHFDAENDSRIKLLYIESIGDPDRLLFHASSLIRKGCKIAAIKSGSSESG---SRAASSH 258 Query: 262 SGGKGGAEDKINA-MKEAGICIAPSPARI 289 +G ++ + A ++AGI S + Sbjct: 259 TGAIASSDSAVEALFRKAGIVRCYSREEL 287 >gi|170021101|ref|YP_001726055.1| membrane protein FdrA [Escherichia coli ATCC 8739] gi|169756029|gb|ACA78728.1| FdrA family protein [Escherichia coli ATCC 8739] Length = 555 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|319948427|ref|ZP_08022565.1| GNAT acetyltransferase [Dietzia cinnamea P4] gi|319437909|gb|EFV92891.1| GNAT acetyltransferase [Dietzia cinnamea P4] Length = 922 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 101/290 (34%), Gaps = 29/290 (10%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + + G G ++P +V + +V + Sbjct: 246 VAVIGASDQVGKIGHTVMRNLIGNGFAGPVYPVN---SDATSVQSVRAYASVRHIPD--P 300 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIP------VLDMVRVKARLEKSSSRL 124 + +V+ VP + + + + + + +V I+ G V+ R+ + R+ Sbjct: 301 VDLAVVAVPAASMSEVLDDCLSKGVSTLVVISAGFSDVGSAGVVSERRLVSEARAHGMRV 360 Query: 125 IGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 +GPN G++ D + + G G +SG L + ++ GLG ST V Sbjct: 361 VGPNALGVINTSADVKLNATLAEVVPGPGRAGFFCQSGALGIAILAAAARRGLGLSTFVS 420 Query: 183 IGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 G D+L+ + D +TE +++ E G A +F + + R KP+V Sbjct: 421 AGNRA--DVSGNDLLQYWDTDTSTEVVLLYLESFG----NARKFSRIARRVARNKPVVVV 474 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 G I G +++G+ S + + Sbjct: 475 RRAVDDLESGVEGLTANAIGGL----------FRDSGLIQVDSITDMFDT 514 >gi|330503667|ref|YP_004380536.1| CoA-binding domain-containing protein [Pseudomonas mendocina NK-01] gi|328917953|gb|AEB58784.1| CoA-binding domain protein [Pseudomonas mendocina NK-01] Length = 707 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 95/259 (36%), Gaps = 24/259 (9%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK + + + ++ E + + ++ + + DA+ + Sbjct: 44 PVNPK------SSEIQGLRCYASIEELPQAP--DVGLVLLSAKRSIDAVRSLAKLGCKAA 95 Query: 99 VCITEGIPVLDM--VRVKARLE--KSSSRLIGPNCPGILTPDS----CKIGIMPGSIFRK 150 V + G + ++ L+ S R++GPN G++ + G + S Sbjct: 96 VVLASGFAEAGEGGLNLQEELKTAAGSMRILGPNTIGLVNLSARIPLSASGALEISDLPA 155 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 G V ++S+SG + + + + G+G S+ + + E D ++ + D+ T+ I Sbjct: 156 GHVAVVSQSGGILGALLSRAAGRGIGLSSLISTSNE--VDLEVSDFIDYLVDDDNTKVIA 213 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + E + + + G KP+V F G++ ++G + Sbjct: 214 LYLESVRNPQ-RFREVALRARAAG--KPLVVFKIGRSEAGATAASSHTGALAGEDRVYD- 269 Query: 271 KINAMKEAGICIAPSPARI 289 +E G+ A + Sbjct: 270 --AFFRELGVIRANTFDEF 286 >gi|253774494|ref|YP_003037325.1| membrane protein FdrA [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160586|ref|YP_003043694.1| membrane protein FdrA [Escherichia coli B str. REL606] gi|297517212|ref|ZP_06935598.1| membrane protein FdrA [Escherichia coli OP50] gi|242376297|emb|CAQ30990.1| involved in protein transport; multicopy suppressor of dominant negative ftsH mutants [Escherichia coli BL21(DE3)] gi|253325538|gb|ACT30140.1| FdrA family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972487|gb|ACT38158.1| membrane protein FdrA [Escherichia coli B str. REL606] gi|253976697|gb|ACT42367.1| membrane protein FdrA [Escherichia coli BL21(DE3)] Length = 555 Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ + AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLSDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + EA + A + Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKAT 278 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 279 GKPTVALFLGYTPAVAR 295 >gi|221070100|ref|ZP_03546205.1| CoA-binding domain protein [Comamonas testosteroni KF-1] gi|220715123|gb|EED70491.1| CoA-binding domain protein [Comamonas testosteroni KF-1] Length = 701 Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 89/240 (37%), Gaps = 20/240 (8%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVR 112 FT+V E E + +++ +P + DA+ + A I V + G Sbjct: 57 FTSVTEIGE--PVDVALLMLPIAAMNDALRDLGAAGIRSAVVLAGGFAETGEEGRALQEE 114 Query: 113 VKARLEKSSSRLIGPNCPGILTP---DSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 + A + RL+GPNC G + C G M + KG + I+S+SG + Sbjct: 115 LVATARELGIRLLGPNCLGFINFTTGGVCWTGSMR-TPPLKGGISIVSQSGAVATVMKHF 173 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 Q G+G + G + V G +V++ + D AT I + E + Sbjct: 174 AHQHGIGLNVVAATGNEAVLGL--AEVIDYLVDDPATRVITVFAETV---RDTGLLRSAA 228 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 E + KPIV G++ + + G G + ++ G+ S + Sbjct: 229 ERALRQGKPIVVLKVGRSEITVQAAQSHTGSLVGDDGVFDGV---CRQLGLVRVRSIEEL 285 >gi|284044272|ref|YP_003394612.1| CoA-binding protein [Conexibacter woesei DSM 14684] gi|283948493|gb|ADB51237.1| CoA-binding domain protein [Conexibacter woesei DSM 14684] Length = 744 Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 97/282 (34%), Gaps = 26/282 (9%) Query: 24 HTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGA 83 H L V +HP+ P +V E + +++ VPP+ Sbjct: 27 HQLLLSLAPFPGPVHPVHPR------ASEVAGRPAHPSVGAIGE--PVDLALLAVPPAAL 78 Query: 84 GDAIIESIEAEIPLIVC------ITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 A+ + EA + + + RL+GPN G L P + Sbjct: 79 LAALRDCAEAGVGAAAIHAGGLAEAGAEGAALQAELLDVARSAEIRLLGPNTSGFLDPAA 138 Query: 138 CKIGIMPGSIFR--KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 + G + I+++SG + ++ F EG+G A+G+G + D Sbjct: 139 RLHATFVPGVAAIAPGPLAIVAQSGGVNHQLAFAAQAEGIGVRLAIGLGNAA--DVDVPD 196 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG 255 VL+ D T ++V+ E + + + + + P++ AG+ Sbjct: 197 VLDQLADDAETGAVVLALE----GVRDGRRLIAAIERLTARVPVIALKAGRADVGAFAQS 252 Query: 256 HAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 H GA+ G + +AG + S + + LL Sbjct: 253 HTGALT----GSYRVAHAGLAQAGAVVVQSTQELLDAARALL 290 >gi|156977002|ref|YP_001447908.1| hypothetical protein VIBHAR_05787 [Vibrio harveyi ATCC BAA-1116] gi|156528596|gb|ABU73681.1| hypothetical protein VIBHAR_05787 [Vibrio harveyi ATCC BAA-1116] Length = 877 Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 92/247 (37%), Gaps = 26/247 (10%) Query: 57 PVFTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 P + +V+ + +++ + + E E + I++ +D Sbjct: 47 PKYKSVSGVIAYPNIASLPYTPDIAILCTNVARNKKLLKELDERGTEFAIVISDDAENID 106 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 + + + R+IGPN G++ P G + +S+S + + Sbjct: 107 VADL-------NIRVIGPNSLGVILPWHNFNCSFSPVAALPGKIAFISQSAAVCTTVLDW 159 Query: 170 TSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKD 229 + + +G S+ + IG +F ++L+ D TE+I++ + ++A +F+ Sbjct: 160 ANDKNIGFSSFISIGQGQ--DVDFAELLDYLSMDAKTEAILLYVDTI----KDARRFMSA 213 Query: 230 EAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 R + I+ AGK+ RT+G +A++ G+ + + Sbjct: 214 ARAASRNRRILVLKAGKS-TQARTLGD-----QDVDSLDVIYDSAIRRTGMLRVGNTHEL 267 Query: 290 GRSLVEL 296 ++ L Sbjct: 268 FAAVETL 274 >gi|157159355|ref|YP_001461705.1| membrane protein FdrA [Escherichia coli E24377A] gi|157081385|gb|ABV21093.1| bacterial FdrA protein [Escherichia coli E24377A] Length = 555 Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ + AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLSDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + EA + A + Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKAT 278 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 279 GKPTVALFLGYTPAVAR 295 >gi|256020489|ref|ZP_05434354.1| membrane protein FdrA [Shigella sp. D9] gi|332281669|ref|ZP_08394082.1| acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain-containing protein [Shigella sp. D9] gi|332104021|gb|EGJ07367.1| acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain-containing protein [Shigella sp. D9] Length = 555 Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ + AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLSDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + EA + A + Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKAT 278 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 279 GKPTVALFLGYTPAVAR 295 >gi|87198698|ref|YP_495955.1| CoA-binding protein [Novosphingobium aromaticivorans DSM 12444] gi|87134379|gb|ABD25121.1| CoA-binding protein [Novosphingobium aromaticivorans DSM 12444] Length = 705 Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 101/293 (34%), Gaps = 25/293 (8%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 V V G + K G + G ++P + + +V E Sbjct: 20 VAVVGASDKPGALGATLLTNLDRNGYAGAVYPVNPKR---DEIMGKRCYASVGALPE--G 74 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRL 124 + +V+ +P +G +A+ + + +V + G + + ++ + Sbjct: 75 VDVAVLAIPRAGVLEAVKGLADRKCGGVVIFSAGFAEGGEEGLAEQREIARIAHEAGMVV 134 Query: 125 IGPNCPGILT----PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 GPNC G++ + K ++GI+S+SG + G S + Sbjct: 135 EGPNCLGLVNYVDRIPLTFVETNAVPPAGKRAIGIVSQSGAMAAVLGTMLLARDAGVSYS 194 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 V G + G E D ++ + + T I M+ E + A + KP+V Sbjct: 195 VSTGNEAASGVE--DYVDWLVDQDDTHVIAMIVEQFRKPQ---AFLAAARRAKAAGKPVV 249 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAM-KEAGICIAPSPARIGRS 292 GK++ + A +G G + AM AG+ A + +G Sbjct: 250 LLHPGKSS----AARESAATHTGAMAGDYKLMRAMVARAGVIFAETLEELGDI 298 >gi|328545117|ref|YP_004305226.1| acetyltransferase, GNAT family [polymorphum gilvum SL003B-26A1] gi|326414859|gb|ADZ71922.1| Acetyltransferase, GNAT family [Polymorphum gilvum SL003B-26A1] Length = 908 Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 82/234 (35%), Gaps = 14/234 (5%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI---PVLDMVRVKARLEKSSSR 123 A+ V P A I + +V G P + + R Sbjct: 70 AEGTADLVVHLGAPEQAPALIAAAGAIGTRAVVLAAPGFDAWPTALVTDCLIASRPQAVR 129 Query: 124 LIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 LIGP G+ P + ++ + G + +++RS + + + +G S V + Sbjct: 130 LIGPGSLGVAAPGNGVDALLSAAAPAAGDLALIARSSAVLNATLAWAASHNVGFSGVVSL 189 Query: 184 GGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFV 243 G + D+++ F D T +I++ E S +FL R KP+V Sbjct: 190 GQR--TDVDVGDLIDHFAGDFRTRAILVHLEGVSSP----RKFLSAARAAARSKPVVLIR 243 Query: 244 AGKTAPPGRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARIGRSLVEL 296 +G++ R +G A+ A++ AGI + ++ L Sbjct: 244 SGRS----RDRTGTTRTHAGRMTTADAVYEAALRRAGILRVEDLDEMFEAVETL 293 >gi|194437462|ref|ZP_03069559.1| bacterial FdrA protein [Escherichia coli 101-1] gi|300819543|ref|ZP_07099737.1| membrane protein FdrA [Escherichia coli MS 107-1] gi|300929121|ref|ZP_07144614.1| membrane protein FdrA [Escherichia coli MS 187-1] gi|194423631|gb|EDX39621.1| bacterial FdrA protein [Escherichia coli 101-1] gi|300462913|gb|EFK26406.1| membrane protein FdrA [Escherichia coli MS 187-1] gi|300527869|gb|EFK48931.1| membrane protein FdrA [Escherichia coli MS 107-1] gi|323963285|gb|EGB58849.1| FdrA protein [Escherichia coli H489] Length = 555 Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ + AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLSDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + EA + A + Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKAT 278 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 279 GKPTVALFLGYTPAVAR 295 >gi|209917734|ref|YP_002291818.1| membrane protein FdrA [Escherichia coli SE11] gi|307314566|ref|ZP_07594168.1| FdrA family protein [Escherichia coli W] gi|209910993|dbj|BAG76067.1| conserved hypothetical protein [Escherichia coli SE11] gi|306905884|gb|EFN36407.1| FdrA family protein [Escherichia coli W] gi|315059792|gb|ADT74119.1| predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli W] gi|323184855|gb|EFZ70225.1| protein fdrA [Escherichia coli 1357] gi|323379640|gb|ADX51908.1| ATP-citrate lyase/succinyl-CoA ligase [Escherichia coli KO11] gi|323945182|gb|EGB41242.1| bacterial FdrA protein [Escherichia coli H120] gi|324019527|gb|EGB88746.1| membrane protein FdrA [Escherichia coli MS 117-3] gi|324116756|gb|EGC10670.1| FdrA protein [Escherichia coli E1167] Length = 555 Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ + AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLSDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + EA + A + Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKAT 278 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 279 GKPTVALFLGYTPAVAR 295 >gi|269956720|ref|YP_003326509.1| GCN5-related N-acetyltransferase [Xylanimonas cellulosilytica DSM 15894] gi|269305401|gb|ACZ30951.1| GCN5-related N-acetyltransferase [Xylanimonas cellulosilytica DSM 15894] Length = 907 Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 90/250 (36%), Gaps = 19/250 (7%) Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDM 110 P V + + ++ +P + A A+ + +V ++ G Sbjct: 258 PHAREVPTGADVPEIDLVLLALPAADAVTAVRQLAGRGARGVVVLSAGFAETGPDGLERQ 317 Query: 111 VRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R++GP G++T P + + G VGI +S Sbjct: 318 RELLRVAHGLGMRVVGPASWGVVTTVPGTRLRASLAEHAPAPGVVGIFCQSAPAAVTLAA 377 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 + LG S V G D+++ +L D AT+ + E G+ +F + Sbjct: 378 TLVRRSLGVSAIVSAGHRA--DVSGNDLMQYWLTDAATQVACLYLESIGNP----RKFTR 431 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 + +KP+V VAG++ GHA + + ++++G+ A + + Sbjct: 432 VARRLATEKPVVVVVAGRS-GQVVPPGHAVRATHAPRALLD---EMLRQSGVIRAENTHQ 487 Query: 289 IGRSLVELLG 298 + + ++L Sbjct: 488 LID-IAQVLA 496 >gi|73538423|ref|YP_298790.1| CoA-binding [Ralstonia eutropha JMP134] gi|72121760|gb|AAZ63946.1| CoA-binding [Ralstonia eutropha JMP134] Length = 712 Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 97/272 (35%), Gaps = 26/272 (9%) Query: 27 QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA 86 + + + + ++PK V + ++ E + ++ + A A Sbjct: 47 YLLRHGYSGAIYPVNPK------VDAIAGVRCYPDISSLPEVP--DVGIVLLGAERAHHA 98 Query: 87 IIESIEAEIPLIVCITEGIPVLDMVRVKARLE----KSSSRLIGPNCPGILTPDSC---- 138 + E + + G + + E RL+GPN G++ Sbjct: 99 VRELAARGTGAAIVLASGYTETGAEGARRQAELVEAAGKMRLLGPNTIGLVNVTESIPLS 158 Query: 139 KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLE 198 G + F G +G++S+SG + + + + G+G S V + + D ++ Sbjct: 159 ASGALEMDKFPAGGIGVVSQSGGILGAVLSRAAARGVGLSKLVSTSNEA--DLDLSDFID 216 Query: 199 LFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAG 258 D AT I + E ++ A LK KP+V F G++ R A Sbjct: 217 YLADDPATRVIALYVESVRHPDKFRAAALKAARAG---KPVVAFKIGRSEAGAR----AA 269 Query: 259 AVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 +G GA+ +A + GI A + + + Sbjct: 270 VSHTGAMAGADRMYDALFAQVGIIRAHAFSDL 301 >gi|191168126|ref|ZP_03029924.1| bacterial FdrA protein [Escherichia coli B7A] gi|309797207|ref|ZP_07691603.1| membrane protein FdrA [Escherichia coli MS 145-7] gi|190901856|gb|EDV61607.1| bacterial FdrA protein [Escherichia coli B7A] gi|308119191|gb|EFO56453.1| membrane protein FdrA [Escherichia coli MS 145-7] Length = 555 Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ + A+ ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLSDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|300722280|ref|YP_003711564.1| putative acyl-CoA synthetase , ATP-binding [Xenorhabdus nematophila ATCC 19061] gi|297628781|emb|CBJ89359.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding [Xenorhabdus nematophila ATCC 19061] Length = 844 Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 80/226 (35%), Gaps = 15/226 (6%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + +VI S + + ++ ++ P +K K R++GPN Sbjct: 34 PDLAVICTHHSRNLSLLEQLALHGCKTVIILSS--PPSQFTELKQCGLKHHIRILGPNSL 91 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 GIL P KG + +S+S ++ + + +G S + +G Sbjct: 92 GILAPWIGLNASFSPIPILKGKLAFISQSAAISNTILDWANHRNIGFSYFIALGDSVDID 151 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 + + L+ D T +I++ E +A +FL R KPI+ + +T Sbjct: 152 IDDL--LDFLARDSKTSAILLHLEHIS----DARRFLSASRSASRNKPILIVKSSRT--- 202 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A ++ + A++ AG+ + ++ L Sbjct: 203 ----RKAQQLLGEQQNFDAAYDAAIQRAGLLRVQDTHEMFSAVETL 244 >gi|293607478|ref|ZP_06689815.1| CoA-binding protein [Achromobacter piechaudii ATCC 43553] gi|292814123|gb|EFF73267.1| CoA-binding protein [Achromobacter piechaudii ATCC 43553] Length = 699 Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 94/282 (33%), Gaps = 36/282 (12%) Query: 26 EQAILYCQTQVVGGIHPKKG---STYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSG 82 + + + I+P + +++P + + +P S Sbjct: 38 RFMRKHGYSGALYPINPARAEILGERAYPSLLDLP-----------GPVDHVFVMIPGSE 86 Query: 83 AGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPD 136 + +A ++ ++G + A + RL+GPN G+ Sbjct: 87 VEAVLPACAQAGAKVVTVYSDGFGETGPEGQARQAALVALARELGLRLLGPNSIGLADLH 146 Query: 137 SCKI----GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTE 192 + I G + ++S+SG++ + + + G G + +V +G + Sbjct: 147 TGGILSVNAAFEADTLLSGDISMVSQSGSMMGSLLSRAAARGFGFAKSVSVGNE--SDIS 204 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP-G 251 +V++ + D T+ I++ E A A + + KP+V + G++ Sbjct: 205 VGEVVDALVDDPHTKVILLFLETLRDAPTLARALSRARVQG---KPVVAYKLGRSEQGDA 261 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEA-GICIAPSPARIGRS 292 H GA+ + ++A A G+ + Sbjct: 262 LAQSHTGAMAGN-----DAAVDAFLTAHGVMRVRHLETLFEI 298 >gi|194429588|ref|ZP_03062108.1| bacterial FdrA protein [Escherichia coli B171] gi|194412385|gb|EDX28687.1| bacterial FdrA protein [Escherichia coli B171] gi|323160870|gb|EFZ46795.1| protein fdrA [Escherichia coli E128010] Length = 555 Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 85/187 (45%), Gaps = 12/187 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ + A+ ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLSDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAG 245 V G Sbjct: 282 TVALFLG 288 >gi|218553082|ref|YP_002385995.1| membrane protein FdrA [Escherichia coli IAI1] gi|218359850|emb|CAQ97392.1| putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli IAI1] Length = 555 Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 85/187 (45%), Gaps = 12/187 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ + A+ ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLSDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ ADE +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAG 245 V G Sbjct: 282 TVALFLG 288 >gi|195927598|pdb|3DMY|A Chain A, Crystal Structure Of A Predicated Acyl-Coa Synthetase From E.Coli gi|195927599|pdb|3DMY|B Chain B, Crystal Structure Of A Predicated Acyl-Coa Synthetase From E.Coli Length = 480 Score = 75.8 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 82/194 (42%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + + ++ + + D +++K R + Sbjct: 29 SACQKLPDANLALISVAGEYAAELANQALDRNLN-VXXFSDNVTLEDEIQLKTRAREKGL 87 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 + GP+C + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 88 LVXGPDCGTSXIAGTPLA---FANVXPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 144 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE ADE +E + V + EA + A + KP Sbjct: 145 LGGRDLSREVGGISALTALEXLSADEKSEVLAFVSKPPA----EAVRLKIVNAXKATGKP 200 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 201 TVALFLGYTPAVAR 214 >gi|73537717|ref|YP_298084.1| CoA-binding [Ralstonia eutropha JMP134] gi|72121054|gb|AAZ63240.1| CoA-binding [Ralstonia eutropha JMP134] Length = 697 Score = 75.8 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 80/271 (29%), Gaps = 28/271 (10%) Query: 24 HTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGA 83 H +A Y T ++P++ + + T+ E + ++I V A Sbjct: 32 HYMKAHGYAGTLY--PVNPQR------DTIQGLRAYPTLDALPEVP--DLAIIIVAGEAA 81 Query: 84 GDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 A+ + + + I G + + RL+GPN G+ S Sbjct: 82 VQAVHDCARLGVAAAIVIASGFGEAGAEGRRQQDEMVRAARATGLRLVGPNSQGLANFGS 141 Query: 138 CKIGIMPGS----IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 I + G V ++S+SG + +G+G G Sbjct: 142 GAIASFSTMFIEVPPQDGPVAVVSQSGGVAAMVYGLLRGQGIGVRHMHATGNQA--DITV 199 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 D+ D +++ E E A R R PIV AG++ R Sbjct: 200 SDLALAVAHDPGVRLVLLYLESLSDPEVLAEAA---RVARARNVPIVAVKAGRSQDGQRA 256 Query: 254 MGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 I+ + + GI Sbjct: 257 AASHTGAIANEDRAVD---AFLARHGIWRVD 284 >gi|331645704|ref|ZP_08346807.1| protein FdrA [Escherichia coli M605] gi|330910309|gb|EGH38819.1| protein fdrA [Escherichia coli AA86] gi|331044456|gb|EGI16583.1| protein FdrA [Escherichia coli M605] Length = 555 Score = 75.8 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 16/196 (8%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + +++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SASQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDS--CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 ++GP+C + + +MPG G++G++ SGT E Q + G G + A Sbjct: 169 LVMGPDCGTSMIAATPLAFANVMPG-----GNIGVIGASGTGIQELCSQIALAGEGITHA 223 Query: 181 VGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK 236 +G+GG V G + LE+ ADE +E + V + EA + A + Sbjct: 224 IGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKATG 279 Query: 237 KPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 280 KPTVALFLGYTPAVAR 295 >gi|33603681|ref|NP_891241.1| putative pimeloyl-CoA synthetase [Bordetella bronchiseptica RB50] gi|33577806|emb|CAE35071.1| putative pimeloyl-CoA synthetase [Bordetella bronchiseptica RB50] Length = 710 Score = 75.8 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 88/282 (31%), Gaps = 26/282 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK + + ++P + V + ++A E + +++ Sbjct: 42 GKIAGRPLAYMLSRGFVGKLFPVNPTRAQV------QGVKSYPSLAAIGE--PVDLAIVG 93 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPG 131 P + I E I A + V + G ++GPNC G Sbjct: 94 TPAALVEGVIREGIAAGVRAFVVFSSGFSETGEAGAALQRRLGELARAHGVTILGPNCLG 153 Query: 132 ILTPDSCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + + I + R G ++S+SG L + + GLG S + G + Sbjct: 154 VANSATGLIASFTTALEETPIRPGGFALVSQSGALGAYWMDICLRSGLGFSKWITTGNE- 212 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + + D T I + E + L+ A+ G KP++ AG++ Sbjct: 213 -CDMDAAAAIAYLAGDADTRVIGLYIEDI-RDTAAFRRALRVAAEAG--KPVIAIKAGRS 268 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 ++G + +++ G S + Sbjct: 269 QAGAAAAASHTGALAGDDALYD---ACLRQHGALRVDSLGEM 307 >gi|26246526|ref|NP_752565.1| membrane protein FdrA [Escherichia coli CFT073] gi|26106925|gb|AAN79109.1|AE016757_13 Protein fdrA [Escherichia coli CFT073] Length = 555 Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + E + + K Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA---ETVRLKIXNAMKATG 279 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 280 -KPTVALFLGYTPAVAR 295 >gi|300940528|ref|ZP_07155097.1| membrane protein FdrA [Escherichia coli MS 21-1] gi|300454650|gb|EFK18143.1| membrane protein FdrA [Escherichia coli MS 21-1] Length = 555 Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + EA + A + Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKAT 278 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 279 GKPTVALFLGYTPAVAR 295 >gi|153832786|ref|ZP_01985453.1| acyl-CoA synthetase [Vibrio harveyi HY01] gi|148870920|gb|EDL69810.1| acyl-CoA synthetase [Vibrio harveyi HY01] Length = 877 Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 99/285 (34%), Gaps = 41/285 (14%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA-------A 71 +AG + + + PK + +V+ Sbjct: 24 RAGQIVMRNLLQSGFGGAIMPVTPK---------------YKSVSGVIAYPNIASLPYTP 68 Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPG 131 + +++ + + E E + I++ +D+ + + R+IGPN G Sbjct: 69 DIAILCTNVARNKKLLKELDERGTEFAIVISDDAESIDVADL-------NIRVIGPNSLG 121 Query: 132 ILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGT 191 ++ P G + +S+S + + + + +G S+ + IG Sbjct: 122 VILPWHNFNCSFSPVAALPGKIAFISQSAAVCTTVLDWANDKNIGFSSFISIGQGQ--DI 179 Query: 192 EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG 251 +F ++L+ D TE+I++ + ++A +F+ R + I+ AGK+ Sbjct: 180 DFAELLDYLSMDAKTEAILLYVDTI----KDARRFMSAARAASRNRRILVLKAGKS-TQA 234 Query: 252 RTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 RT+G +A++ G+ + + ++ L Sbjct: 235 RTLGD-----QDVDSLDVIYDSAIRRTGMLRVGNTHELFAAVETL 274 >gi|320201482|gb|EFW76062.1| Protein fdrA [Escherichia coli EC4100B] Length = 555 Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + EA + A + Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKAT 278 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 279 GKPTVALFLGYTPAVAR 295 >gi|253569301|ref|ZP_04846711.1| acetyl-CoA synthetase [Bacteroides sp. 1_1_6] gi|251841320|gb|EES69401.1| acetyl-CoA synthetase [Bacteroides sp. 1_1_6] Length = 686 Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 90/260 (34%), Gaps = 22/260 (8%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE-SIEAEIP 96 ++PK VP F V KE + +V+ VP D + + E + Sbjct: 42 RAVNPK------ETEVQGVPAFADV---KELPDTDLAVLAVPAVMCPDIVETLASEKQTR 92 Query: 97 LIVCITEGIPVLDMV------RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + ++ G R+ + K + LIGPNC G++ + P Sbjct: 93 AFIILSAGFGEETREGALLEERILETVNKYGASLIGPNCIGLMNTWHHSVFSQPIPNLNS 152 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 V ++S SG + +GL ++ +G G E DVL+ + E Sbjct: 153 KGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQFMDENFDPEKDS 210 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + + + + L + RK +A A + A + +G ++ Sbjct: 211 RIKLLYIESIHNPDRLLFHASSLIRK---GCKIAAIKAGSSESGSRAASSHTGAIASSDS 267 Query: 271 KINA-MKEAGICIAPSPARI 289 + A ++AGI S + Sbjct: 268 AVEALFRKAGIVRCFSREEL 287 >gi|170682785|ref|YP_001742662.1| membrane protein FdrA [Escherichia coli SMS-3-5] gi|170520503|gb|ACB18681.1| bacterial FdrA protein [Escherichia coli SMS-3-5] Length = 555 Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + EA + A + Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA----EAVRLKIVNAMKAT 278 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 279 GKPTVALFLGYTPAVAR 295 >gi|281177690|dbj|BAI54020.1| conserved hypothetical protein [Escherichia coli SE15] Length = 555 Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + +++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SASQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ DE +E + V + EA + A + Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSVDEKSEVLAFVSKPPA----EAVRLKIVNAMKAT 278 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 279 GKPTVALFLGYTPAVAR 295 >gi|94313336|ref|YP_586545.1| CoA-binding domain-containing protein [Cupriavidus metallidurans CH34] gi|93357188|gb|ABF11276.1| acetyl CoA synthetase [Cupriavidus metallidurans CH34] Length = 712 Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 97/266 (36%), Gaps = 26/266 (9%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P + +P + +VA+ E +V+ VP + D + E Sbjct: 51 PVNPNRR------EVQGLPAYASVADLPEVPDV--AVVAVPAAQVLDTVTALGERGTRAA 102 Query: 99 VCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGS----IF 148 + + G + A +S RL+GPN G++ + +G S Sbjct: 103 ILFSAGFAEIGGDGVTRQAELLAAARRSGLRLLGPNALGLINVRTGFVGSFASSISLGPI 162 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 + G VGI+S+SG V G+G S+ V G + +V++L + D T Sbjct: 163 QAGHVGIVSQSGAYGGHLVMAAQSAGVGLSSIVMTGNEA--DITLGEVVQLMVDDPHTRV 220 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 I + E A +A R +KP+V G++ G A I+G Sbjct: 221 IALYSEGINDGNGLVAAL---QAARRARKPVVMMKVGRSEVGGAAARSHTASIAGDDAVI 277 Query: 269 EDKINAMKEAGICIAPSPARIGRSLV 294 + + + G+ A S + + Sbjct: 278 DAVLAEL---GVVRARSTEEMLDIVR 300 >gi|319764961|ref|YP_004128898.1| CoA-binding domain protein [Alicycliphilus denitrificans BC] gi|330827155|ref|YP_004390458.1| CoA-binding domain-containing protein [Alicycliphilus denitrificans K601] gi|317119522|gb|ADV02011.1| CoA-binding domain protein [Alicycliphilus denitrificans BC] gi|329312527|gb|AEB86942.1| CoA-binding domain protein [Alicycliphilus denitrificans K601] Length = 692 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 94/275 (34%), Gaps = 28/275 (10%) Query: 26 EQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGD 85 + + + ++PK+ +P F ++ E +A VI +P Sbjct: 30 AYMLRHGFAGRILPVNPKR------SEVQGLPAFPSLRELPA--PPDAVVISLPSEDVAA 81 Query: 86 AIIESIEAEIPLIVCITEGIPVL------DMVRVKARLEKSSSRLIGPNCPGILTPDSCK 139 AI + + + V + G L + AR ++ RL GPNC G+ + Sbjct: 82 AIDDCVAVGASMAVIYSSGFAELGDAGRAQQAELLARAQRGGLRLFGPNCQGVANFSTGA 141 Query: 140 I----GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFID 195 I ++ + G V I+S+SG + G+G V G + + Sbjct: 142 ILNFSTMINENPPEDGPVAIVSQSGAGAAILYGGLRRAGIGMRYMVSTGNEA--DVCAAE 199 Query: 196 VLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT-APPGRTM 254 + L DE +V+ E + A R R PI+ AG+T A Sbjct: 200 AVRTVLGDEHIRLVVLYLETL---RQSAQLAEAARLARARGVPILAVKAGRTSAGQATAS 256 Query: 255 GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 H GA+ + M++ GI + Sbjct: 257 SHTGALAAEDALAD----AFMRQHGIVRLTDFREL 287 >gi|73539026|ref|YP_299393.1| CoA-binding [Ralstonia eutropha JMP134] gi|72122363|gb|AAZ64549.1| CoA-binding [Ralstonia eutropha JMP134] Length = 711 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 88/287 (30%), Gaps = 32/287 (11%) Query: 17 TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVI 76 T + G + V ++P+ + + V + + +V+ Sbjct: 33 TSRIGGVALDHLQRLGYRGTVYPVNPR------YAEIAGLACYPDVESLPK--TPDVAVL 84 Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCP 130 + + I + G + A ++ + GPNC Sbjct: 85 ALGADDVLPQMRRCHAVGIRAAILYASGFAEAGEAGIALQAELTAFARETGMAIAGPNCM 144 Query: 131 GILTPDSCKIGIMP------GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 G+ + I G V +L++SG + Q +G + G Sbjct: 145 GLANLTTRAITAFATTFRAYPPQDGPGHVSLLTQSGNVCAIVYATGRQMDVGFHQFINTG 204 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMV--GEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 + ++ D L+ D T ++V G G +AA L+ KP++ Sbjct: 205 NEAC--LDYADYLDYLADDAQTGAVVGYVEGLRNGPRFIDAAARLRAAG-----KPLIVL 257 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 AG++ AV++G + A + G A PA + Sbjct: 258 KAGESEAGSSATQSHTAVLAGNQAIYR---AAFAQVGAMQARDPAHL 301 >gi|94311534|ref|YP_584744.1| CoA-binding [Cupriavidus metallidurans CH34] gi|93355386|gb|ABF09475.1| pimeloyl-CoA synthetase [Cupriavidus metallidurans CH34] Length = 708 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 77/232 (33%), Gaps = 20/232 (8%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM------VRVKARLEKSSSRL 124 + +++ VP + + E + + +T G +K + ++ R+ Sbjct: 72 PDTALVAVPAEHVLAVLEQCGEKGVRFAIILTSGFGEAGEEGKAAEQTMKEIVARTGMRI 131 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFRK----GSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 GPNCPG+ ++G FR G VG+ ++ G L + Q G+G + Sbjct: 132 YGPNCPGLTNITE-RLGFTFSPSFRHDLRGGPVGLATQGGGLGRNVL-QAMDRGIGVALW 189 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 G + D + + I + E + A K KP+V Sbjct: 190 SSSGNEVDLQVS--DFIHYMADAPDIKVIATLLEGVNDGRKFVAAVQHAARKG---KPVV 244 Query: 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 G++ + A I+ G AE + G+ + + Sbjct: 245 VLKVGRSEYGRKAAQSHTASIT---GSAEVNSAVFAQLGVVEVDDIDELIDT 293 >gi|260173040|ref|ZP_05759452.1| acetyl-CoA synthetase [Bacteroides sp. D2] gi|315921318|ref|ZP_07917558.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695193|gb|EFS32028.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 686 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 92/262 (35%), Gaps = 26/262 (9%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE-SIEAEIP 96 ++PK VP F V + + +V+ VP S D + + + + Sbjct: 42 RAVNPK------EKEVQGVPAFADVNDL---PDTDLAVLAVPASMCPDIVETLASKKQTR 92 Query: 97 LIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + ++ G R+ + K + LIGPNC G++ + P Sbjct: 93 AFIILSAGFGEETHEGALLEERILETVNKYGASLIGPNCIGLMNTWHHSVFSQPIPNLNP 152 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA--DEATES 208 V ++S SG + +GL ++ +G G E DVL+ D +S Sbjct: 153 KGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQFMDESFDPEKDS 210 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 + + I + + L + RK +A A + A + +G + Sbjct: 211 RLKLLYIES--IQNPDRLLFHASSLIRK---GCKIAAIKAGSSESGSRAASSHTGAIASS 265 Query: 269 EDKINA-MKEAGICIAPSPARI 289 + + A ++AGI S + Sbjct: 266 DSAVEALFRKAGIVRCFSREEL 287 >gi|160884206|ref|ZP_02065209.1| hypothetical protein BACOVA_02183 [Bacteroides ovatus ATCC 8483] gi|298479940|ref|ZP_06998139.1| CoA ligase family protein [Bacteroides sp. D22] gi|156110548|gb|EDO12293.1| hypothetical protein BACOVA_02183 [Bacteroides ovatus ATCC 8483] gi|298273749|gb|EFI15311.1| CoA ligase family protein [Bacteroides sp. D22] Length = 686 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 93/262 (35%), Gaps = 26/262 (9%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE-SIEAEIP 96 ++PK VP F V + + +V+ VP S D + + + + Sbjct: 42 RAVNPK------EKEVQGVPAFADVNDL---PDTDLAVLAVPASMCPDMVETLASKKQTR 92 Query: 97 LIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + ++ G R+ + K + LIGPNC G++ + P Sbjct: 93 AFIILSAGFGEETHEGALLEERILETVNKYGASLIGPNCIGLMNTWHHSVFSQPIPNLNP 152 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA--DEATES 208 V ++S SG + +GL ++ +G G E DVL+ D T+S Sbjct: 153 KGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQFMDENFDPETDS 210 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 + + I + + L + RK +A A + A + +G + Sbjct: 211 HLKLLYIES--IQNPDRLLFHASSLIRK---GCKIAAIKAGSSESGSRAASSHTGAIASS 265 Query: 269 EDKINA-MKEAGICIAPSPARI 289 + + A ++AGI S + Sbjct: 266 DSAVEALFRKAGIVRCFSREEL 287 >gi|119387718|ref|YP_918752.1| CoA-binding domain-containing protein [Paracoccus denitrificans PD1222] gi|119378293|gb|ABL73056.1| CoA-binding domain protein [Paracoccus denitrificans PD1222] Length = 705 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 55/305 (18%), Positives = 101/305 (33%), Gaps = 28/305 (9%) Query: 1 MSILVDKNTKVLVQGLT--GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPV 58 M L + V T K G + + T + IHP + Sbjct: 237 MGALFNPGAIAFVGASTSADKLGHHMIRNLVDFGFTGPIYPIHPS------ADEICGLKA 290 Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVR 112 + T+ +A + + +++ V D + E + L +T G R Sbjct: 291 YPTITDAPD--GIDRALVAVASHRVPDVLAECRAKGVKLAQVLTAGFAEFSSDSADLERR 348 Query: 113 VKARLEKSSSRLIGPNCPGILTPDSCK-IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTS 171 + ++ + R++GPNC G + S +G + G + S+SGT + V + Sbjct: 349 MLEQVADGAMRMVGPNCIGTFSAASRMAVGAARYNPTEGGGITFFSQSGTFAGDVVRRAQ 408 Query: 172 QEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 GL A+ G + +D+L D TE I E L A Sbjct: 409 VWGLPLGRALSCGN--CSDVDMVDLLLQAEQDPETEIIAFYMESLRDP------GLFFRA 460 Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGR 291 KP+V +T A ++ + A+ ++G+ + + Sbjct: 461 AAAMAKPVVILRGAQTEQGQVAASSHTAAMATDGLLWD---AALAQSGVIQVSNVDDLMD 517 Query: 292 SLVEL 296 +L+ L Sbjct: 518 TLLAL 522 >gi|255011413|ref|ZP_05283539.1| acetyl-CoA synthetase [Bacteroides fragilis 3_1_12] gi|313149229|ref|ZP_07811422.1| acetyl-CoA synthetase [Bacteroides fragilis 3_1_12] gi|313137996|gb|EFR55356.1| acetyl-CoA synthetase [Bacteroides fragilis 3_1_12] Length = 686 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 100/283 (35%), Gaps = 26/283 (9%) Query: 17 TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVI 76 T K G + I + ++PK VP F A+AKE + +++ Sbjct: 21 THKPGGAILKNLINGGYQGELRAVNPK------ETEVQGVPSF---ADAKELPDTDLAIL 71 Query: 77 YVPPSGAGDAIIE-SIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRLIGPNC 129 +P + + + + E + + ++ G R+ + K + LIGPNC Sbjct: 72 AIPAALCPEVVETLAGEKQTRAFIILSAGFGEETREGALLEERILETVNKYGASLIGPNC 131 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 G+L + P ++S SG + +GL ++ +G Sbjct: 132 IGLLNTWHHSVFTQPIPNLNPQGADLISSSGATAVFILESAVAKGLQFNSVWSVGNAKQI 191 Query: 190 GTEFIDVLELFLA--DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 G E DVL+ D +S + + I + + L + RK +A Sbjct: 192 GVE--DVLQYMDETFDPQKDSKIKLIYIES--IKNPDRLLFHASSLIRK---GCKIAAIK 244 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 A + A + +G ++ + A ++AGI S + Sbjct: 245 AGSSESGSRAASSHTGAIASSDSAVEALFRKAGIVRCYSRGEL 287 >gi|218688376|ref|YP_002396588.1| membrane protein FdrA [Escherichia coli ED1a] gi|331656574|ref|ZP_08357536.1| protein FdrA [Escherichia coli TA206] gi|218425940|emb|CAR06746.1| putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli ED1a] gi|222032308|emb|CAP75047.1| Protein fdrA [Escherichia coli LF82] gi|312945093|gb|ADR25920.1| membrane protein FdrA [Escherichia coli O83:H1 str. NRG 857C] gi|323191185|gb|EFZ76449.1| protein fdrA [Escherichia coli RN587/1] gi|331054822|gb|EGI26831.1| protein FdrA [Escherichia coli TA206] Length = 555 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + E + + K Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA---ETVRLKIVNAMKATG 279 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 280 -KPTVALFLGYTPAVAR 295 >gi|227884474|ref|ZP_04002279.1| membrane protein FdrA [Escherichia coli 83972] gi|300987782|ref|ZP_07178358.1| membrane protein FdrA [Escherichia coli MS 45-1] gi|301049728|ref|ZP_07196674.1| membrane protein FdrA [Escherichia coli MS 185-1] gi|227838560|gb|EEJ49026.1| membrane protein FdrA [Escherichia coli 83972] gi|300298516|gb|EFJ54901.1| membrane protein FdrA [Escherichia coli MS 185-1] gi|300407638|gb|EFJ91176.1| membrane protein FdrA [Escherichia coli MS 45-1] gi|307552420|gb|ADN45195.1| involved in protein transport [Escherichia coli ABU 83972] gi|315294308|gb|EFU53659.1| membrane protein FdrA [Escherichia coli MS 153-1] Length = 555 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + E + + K Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA---ETVRLKIVNAMKATG 279 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 280 -KPTVALFLGYTPAVAR 295 >gi|110640778|ref|YP_668506.1| membrane protein FdrA [Escherichia coli 536] gi|191172279|ref|ZP_03033821.1| bacterial FdrA protein [Escherichia coli F11] gi|300997004|ref|ZP_07181613.1| membrane protein FdrA [Escherichia coli MS 200-1] gi|110342370|gb|ABG68607.1| FdrA protein [Escherichia coli 536] gi|190907378|gb|EDV66975.1| bacterial FdrA protein [Escherichia coli F11] gi|300304363|gb|EFJ58883.1| membrane protein FdrA [Escherichia coli MS 200-1] gi|324010609|gb|EGB79828.1| membrane protein FdrA [Escherichia coli MS 60-1] Length = 555 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + E + + K Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA---ETVRLKIVNAMKATG 279 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 280 -KPTVALFLGYTPAVAR 295 >gi|53715773|ref|YP_101765.1| acetyl-CoA synthetase [Bacteroides fragilis YCH46] gi|253566414|ref|ZP_04843867.1| acetyl-CoA synthetase [Bacteroides sp. 3_2_5] gi|265767274|ref|ZP_06094940.1| acetyl coenzyme A synthetase (ADP forming), alpha domain-containing protein [Bacteroides sp. 2_1_16] gi|52218638|dbj|BAD51231.1| acetyl-CoA synthetase [Bacteroides fragilis YCH46] gi|251944586|gb|EES85061.1| acetyl-CoA synthetase [Bacteroides sp. 3_2_5] gi|263252579|gb|EEZ24091.1| acetyl coenzyme A synthetase (ADP forming), alpha domain-containing protein [Bacteroides sp. 2_1_16] gi|301165289|emb|CBW24860.1| putative CoA-binding protein [Bacteroides fragilis 638R] Length = 686 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 98/281 (34%), Gaps = 22/281 (7%) Query: 17 TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVI 76 T K G + I + ++PK VP F A+AKE + +++ Sbjct: 21 THKPGGAILKNLINGGYQGELRAVNPK------ETEVQGVPSF---ADAKELPDTDLAIL 71 Query: 77 YVPPSGAGDAIIE-SIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRLIGPNC 129 +P + + + E + + ++ G R+ + K + LIGPNC Sbjct: 72 AIPAVLCPEVVETLAAEKQTRAFIILSAGFGEETQEGALLEERILETVNKYGASLIGPNC 131 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 G++ + P V ++S SG + +GL ++ +G Sbjct: 132 IGLMNTWHHSVFTQPIPNLNPHGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQI 191 Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP 249 G E DVL+ + + I + + + L + RK +A A Sbjct: 192 GVE--DVLQYMDENFDVRKDSKIKLIYIESIKNPDRLLFHASSLIRK---GCKIAAIKAG 246 Query: 250 PGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 + A + +G ++ + A ++AGI S + Sbjct: 247 SSESGSRAASSHTGAIASSDSAVEALFRKAGIVRCYSRGEL 287 >gi|323965075|gb|EGB60535.1| FdrA protein [Escherichia coli M863] gi|327254866|gb|EGE66482.1| protein fdrA [Escherichia coli STEC_7v] Length = 555 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + ++ ++ + + D +++K + Sbjct: 110 SACQKLPNANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTHAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGG----DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ DE +E + V + EA + A + Sbjct: 223 AIGLGGRDLSRDVGGISALTALEMLSVDEKSEVLAFVSKPPA----EAVRLKIVNAMKAT 278 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G R Sbjct: 279 GKPTVALFLGYIPAVAR 295 >gi|60683704|ref|YP_213848.1| putative CoA-binding protein [Bacteroides fragilis NCTC 9343] gi|60495138|emb|CAH09959.1| putative CoA-binding protein [Bacteroides fragilis NCTC 9343] Length = 686 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 98/281 (34%), Gaps = 22/281 (7%) Query: 17 TGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVI 76 T K G + I + ++PK VP F A+AKE + +++ Sbjct: 21 THKPGGAILKNLINGGYQGELRAVNPK------ETEVQGVPSF---ADAKELPDTDLAIL 71 Query: 77 YVPPSGAGDAIIE-SIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRLIGPNC 129 +P + + + E + + ++ G R+ + K + LIGPNC Sbjct: 72 AIPAVLCPEVVETLAAEKQTRAFIILSAGFGEETQEGALLEERILETVNKYGASLIGPNC 131 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVK 189 G++ + P V ++S SG + +GL ++ +G Sbjct: 132 IGLMNTWHHSVFTQPIPNLNPHGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQI 191 Query: 190 GTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP 249 G E DVL+ + + I + + + L + RK +A A Sbjct: 192 GVE--DVLQYMDENFDVRKDSKIKLIYIESIKNPDRLLFHASSLIRK---GCKIAAIKAG 246 Query: 250 PGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 + A + +G ++ + A ++AGI S + Sbjct: 247 SSESGSRAASSHTGAIASSDSAVEALFRKAGIVRCYSRGEL 287 >gi|331681912|ref|ZP_08382545.1| protein FdrA [Escherichia coli H299] gi|331081114|gb|EGI52279.1| protein FdrA [Escherichia coli H299] Length = 555 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + E + + K Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA---ETVRLKIVNAMKATG 279 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 280 -KPTVALFLGYTPAVAR 295 >gi|326796806|ref|YP_004314626.1| GCN5-related N-acetyltransferase [Marinomonas mediterranea MMB-1] gi|326547570|gb|ADZ92790.1| GCN5-related N-acetyltransferase [Marinomonas mediterranea MMB-1] Length = 812 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 82/207 (39%), Gaps = 29/207 (14%) Query: 85 DAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP 144 + I E EA I ++ +T +P ++ L + + RL+GPN G+ TP + Sbjct: 97 NTIKECSEAGINALLMLT-WVPDSP-AHIQRLLRRYNMRLLGPNSFGVCTPSRGFNAWLG 154 Query: 145 GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 + G + +LS+SGT+ V + +G+G S V G V++ D Sbjct: 155 LTSPISGRLALLSQSGTIASAVVDWATWQGIGFSHVVATGTP--IDVMPHQVMDYLSNDF 212 Query: 205 ATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGG 264 T+SI+M + G+ +FL R KP+ AV++ Sbjct: 213 QTQSILMYIQNVGNP----TRFLSSLRSTSRSKPV-------------------AVVTEH 249 Query: 265 KGGAEDKI--NAMKEAGICIAPSPARI 289 GA+D++ A+ G + Sbjct: 250 SLGADDRVLDAALSRTGAVRGHRLNDL 276 >gi|317474805|ref|ZP_07934079.1| CoA binding domain-containing protein [Bacteroides eggerthii 1_2_48FAA] gi|316909486|gb|EFV31166.1| CoA binding domain-containing protein [Bacteroides eggerthii 1_2_48FAA] Length = 687 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 91/262 (34%), Gaps = 26/262 (9%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE-SIEAEIP 96 ++PK V + V + + +++ +P +A+ + E ++ Sbjct: 42 RAVNPK------ETEVQGVAAYADVKDI---PDTDLAILAIPAVMCPNAVEVLAAEKQVR 92 Query: 97 LIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + ++ G R+ + K + LIGPNC G++ + P Sbjct: 93 AFIILSAGFGEETHEGALLEDRILETVNKYGASLIGPNCIGLMNTWHHSVFSQPIPNLHP 152 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA--DEATES 208 V ++S SG + +GL ++ +G G E DVL+ D +S Sbjct: 153 QGVDLVSSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQYMDEHFDPEKDS 210 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 + + I + + + + I +G + R A + +G + Sbjct: 211 GIKLLYIESIGDPD-RLLFHASSLIKKGCKIAAIKSGSSESGSR----AASSHTGAIASS 265 Query: 269 EDKINA-MKEAGICIAPSPARI 289 + + A ++AGI S + Sbjct: 266 DSAVEALFRKAGIVRCYSREEL 287 >gi|33592973|ref|NP_880617.1| putative pimeloyl-CoA synthetase [Bordetella pertussis Tohama I] gi|33572621|emb|CAE42215.1| putative pimeloyl-CoA synthetase [Bordetella pertussis Tohama I] gi|332382385|gb|AEE67232.1| putative pimeloyl-CoA synthetase [Bordetella pertussis CS] Length = 706 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 91/277 (32%), Gaps = 28/277 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 K G + + + + I+P + + + ++ + ++ V Sbjct: 38 KIGGRPIKYMLQHGYQGRILPINPGR------DRVQGIAAWHSLDAV--NVPIDMLLVCV 89 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGI 132 A A+ + + + V I+ G +KA + RL+GPN G+ Sbjct: 90 AGEAAVQAVRDGARLGVRVCVVISSGFAETGEPGRQAQKHMKAAAAAAGMRLLGPNTQGL 149 Query: 133 LTPDSCKIGIMP----GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 + + G V ++S+SG ++ EG+G +V G + Sbjct: 150 ANFSNGALATFATLLGEVAPADGPVAVISQSGAMSMVPYAHLRAEGIGVRYSVATGNE-- 207 Query: 189 KGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTA 248 D E L D I++ E + A R R+ P++ AG + Sbjct: 208 CDLNVADFTEAVLRDPEVRLILLYMESLPAPATLARAA---ALARSRQVPVLALKAGVSP 264 Query: 249 PPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAP 284 A +G + ++A ++ GI P Sbjct: 265 ----QGLQAAQSHTGAIATEDKALDAWFRQHGILRVP 297 >gi|319900747|ref|YP_004160475.1| CoA-binding domain protein [Bacteroides helcogenes P 36-108] gi|319415778|gb|ADV42889.1| CoA-binding domain protein [Bacteroides helcogenes P 36-108] Length = 687 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 94/262 (35%), Gaps = 26/262 (9%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE-SIEAEIP 96 ++PK V F V + + +++ +P + DA+ + E + Sbjct: 42 RAVNPK------ETEVQGVTAFADVKDI---PDTDLAILAIPAALCPDAVEVLAAEKRVR 92 Query: 97 LIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + ++ G R+ + + + LIGPNC G+L + P Sbjct: 93 AFIILSAGFGEETHEGALLENRILETVNRYGASLIGPNCIGLLNTWHHSVFSQPIPNLNP 152 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA--DEATES 208 V ++S SG + +GL ++ +G G E DVL+ + T+S Sbjct: 153 QGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQYMDENFNPETDS 210 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 + + I + + + L + RK +A A + A + +G + Sbjct: 211 KIKLLYIESIGDPD--RLLLHASSLIRK---GCRIAAIKAGSSESGSRAASSHTGAIASS 265 Query: 269 EDKINA-MKEAGICIAPSPARI 289 + + A ++AGI S + Sbjct: 266 DSAVEALFRKAGIVRCYSREEL 287 >gi|33600743|ref|NP_888303.1| putative pimeloyl-CoA synthetase [Bordetella bronchiseptica RB50] gi|33568343|emb|CAE32255.1| putative pimeloyl-CoA synthetase [Bordetella bronchiseptica RB50] Length = 706 Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 82/259 (31%), Gaps = 25/259 (9%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I P G V + ++ V A A+ + + Sbjct: 52 YQGRILPINPGRDRVQGIAAWHSLDAVD-----VPIDMLLVCVAGEAAVQAVRDGARLGV 106 Query: 96 PLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP----G 145 + V I+ G +KA + RL+GPN G+ + + Sbjct: 107 RVCVVISSGFAETGEPGRQAQEHMKAAAAAAGMRLLGPNTQGLANFSNGALATFATLLGE 166 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 G V ++S+SG ++ EG+G +V G + D E L D Sbjct: 167 VAPADGPVAVISQSGAMSMVPYAHLRAEGIGVRYSVATGNE--CDLNVADFTEAVLRDPE 224 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK 265 + I++ E + A R R+ P++ AG + A +G Sbjct: 225 VKLILLYMESLPAPATLARAA---ALARSRQVPVLALKAGVSP----QGLQAAQSHTGAI 277 Query: 266 GGAEDKINA-MKEAGICIA 283 + ++A ++ GI Sbjct: 278 ATEDKALDAWFRQHGILRV 296 >gi|269794919|ref|YP_003314374.1| acyl-CoA synthetase (NDP forming) [Sanguibacter keddieii DSM 10542] gi|269097104|gb|ACZ21540.1| acyl-CoA synthetase (NDP forming) [Sanguibacter keddieii DSM 10542] Length = 934 Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 80/228 (35%), Gaps = 18/228 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSR 123 + +++ V P + +V G V + R Sbjct: 284 PVDLALVVVLPGDVLATVRALARLGTRGVVVAGPGYAETGPEGLVLQREVVRAAHAAGMR 343 Query: 124 LIGPNCPGIL--TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 ++GP G+ P+ + + G VGI +S + + + G+G S+ V Sbjct: 344 VVGPGSYGMFARRPEGAFNASLAPVLPPDGRVGIFCQSAPMAVTVLATVWRRGVGLSSFV 403 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G D+++ + DE+T+ + E G+ +F + + KP+V Sbjct: 404 SAGNRA--DVSGNDLMQYWQDDESTDVAGLYLESIGNP----RKFSRIARRLSLVKPVVV 457 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 AG++ GHA + E ++++G+ A + ++ Sbjct: 458 VTAGRS-GHVVPAGHAVRTTRAPRRTLE---EMLRQSGVIRAENTHQM 501 >gi|304438104|ref|ZP_07398047.1| succinyl-CoA synthetase subunit alpha [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368877|gb|EFM22559.1| succinyl-CoA synthetase subunit alpha [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 76 Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 47/64 (73%) Query: 236 KKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVE 295 KP+ F+AG+ APPG+ MGHAGA+ISGGKG A DK+ A+ AGI +A + A IG ++V+ Sbjct: 3 NKPVSAFIAGRQAPPGKRMGHAGAIISGGKGTAADKVAALNAAGIPVADTVAHIGETMVK 62 Query: 296 LLGS 299 LL Sbjct: 63 LLKE 66 >gi|298385992|ref|ZP_06995549.1| CoA ligase family protein [Bacteroides sp. 1_1_14] gi|298261220|gb|EFI04087.1| CoA ligase family protein [Bacteroides sp. 1_1_14] Length = 686 Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 89/260 (34%), Gaps = 22/260 (8%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE-SIEAEIP 96 ++PK VP F V E + +V+ VP D + + E + Sbjct: 42 RAVNPK------ETEVQGVPAFADVTEL---PDTDLAVLAVPAVMCPDIVETLASEKQTR 92 Query: 97 LIVCITEGIPVLDMV------RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + ++ G R+ + K + LIGPNC G++ + P Sbjct: 93 AFIILSAGFGEETREGALLEERILETVNKYGASLIGPNCIGLMNTWHHSVFSQPIPNLNS 152 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 V ++S SG + +GL ++ +G G E DVL+ + E Sbjct: 153 KGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQFMDENFDPEKDS 210 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + + + + L + RK +A A + A + +G ++ Sbjct: 211 RIKLLYIESIHNPDRLLFHASSLIRK---GCKIAAIKAGSSESGSRAASSHTGAIASSDS 267 Query: 271 KINA-MKEAGICIAPSPARI 289 + A ++AGI S + Sbjct: 268 AVEALFRKAGIVRCFSREEL 287 >gi|194432759|ref|ZP_03065044.1| bacterial FdrA protein [Shigella dysenteriae 1012] gi|194419021|gb|EDX35105.1| bacterial FdrA protein [Shigella dysenteriae 1012] gi|332097368|gb|EGJ02349.1| protein fdrA [Shigella dysenteriae 155-74] Length = 555 Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN +I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDANLVLISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ AD +E + V + EA + A + Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADAKSEVLAFVSKPPA----EAVRLKIVNAMKAT 278 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 279 GKPTVALFLGYTPAVAR 295 >gi|33596908|ref|NP_884551.1| putative pimeloyl-CoA synthetase [Bordetella parapertussis 12822] gi|33566359|emb|CAE37604.1| putative pimeloyl-CoA synthetase [Bordetella parapertussis] Length = 706 Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 82/259 (31%), Gaps = 25/259 (9%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I P G V + ++ V A A+ + + Sbjct: 52 YQGRILPINPGRDRVQGIAAWHSLDAVD-----VPIDMLLVCVAGEAAVQAVRDGARLGV 106 Query: 96 PLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP----G 145 + V I+ G +KA + RL+GPN G+ + + Sbjct: 107 RVCVVISSGFAETGEPGRQAQEHMKAAAAAAGMRLLGPNTQGLANFSNGALATFATLLGE 166 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 G V ++S+SG ++ EG+G +V G + D E L D Sbjct: 167 VAPADGPVAVISQSGAMSMVPYAHLRAEGIGVRYSVATGNE--CDLNVADFTEAVLRDPE 224 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK 265 + I++ E + A R R+ P++ AG + A +G Sbjct: 225 VKLILLYMESLPAPATLARAA---ALARSRQAPVLALKAGVSP----QGLQAAQSHTGAI 277 Query: 266 GGAEDKINA-MKEAGICIA 283 + ++A ++ GI Sbjct: 278 ATEDKALDAWFRQHGILRV 296 >gi|237717173|ref|ZP_04547654.1| acetyl-CoA synthetase [Bacteroides sp. D1] gi|262405942|ref|ZP_06082492.1| acetyl coenzyme A synthetase (ADP forming), alpha domain-containing protein [Bacteroides sp. 2_1_22] gi|294647900|ref|ZP_06725452.1| CoA binding domain protein [Bacteroides ovatus SD CC 2a] gi|294806295|ref|ZP_06765142.1| CoA binding domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229443156|gb|EEO48947.1| acetyl-CoA synthetase [Bacteroides sp. D1] gi|262356817|gb|EEZ05907.1| acetyl coenzyme A synthetase (ADP forming), alpha domain-containing protein [Bacteroides sp. 2_1_22] gi|292636808|gb|EFF55274.1| CoA binding domain protein [Bacteroides ovatus SD CC 2a] gi|294446551|gb|EFG15171.1| CoA binding domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 686 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 91/262 (34%), Gaps = 26/262 (9%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE-SIEAEIP 96 ++PK VP F V + + +V+ VP D + + + + Sbjct: 42 RAVNPK------EKEVQGVPAFADVNDL---PDTDLAVLAVPALMCPDMVETLASKKQTR 92 Query: 97 LIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + ++ G + + K + LIGPNC G++ + P Sbjct: 93 AFIILSAGFGEETHEGALLEECILETVNKYGASLIGPNCIGLMNTWHHSVFSQPIPNLNP 152 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA--DEATES 208 V ++S SG + +GL ++ +G G E DVL+ D T+S Sbjct: 153 KGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQFMDENFDPETDS 210 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 + + I + + L + RK +A A + A + +G + Sbjct: 211 HLKLLYIES--IQNPDRLLFHASSLIRK---GCKIAAIKAGSSESGSRAASSHTGAIASS 265 Query: 269 EDKINA-MKEAGICIAPSPARI 289 + + A ++AGI S + Sbjct: 266 DSAVEALFRKAGIVRCFSREEL 287 >gi|13022193|gb|AAK11684.1|AF342826_6 YahF/FdrA-like protein [Enterobacter cloacae] gi|12644699|gb|AAK00490.1| YahF/FdrA-like protein [Acidovorax citrulli] Length = 514 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 15/204 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC 129 N ++I VP A +++++A + + + ++ + V + +K ++GP+C Sbjct: 116 GVNLTLISVPGEYAAAEAMKALKAGMHVHL-FSDNVSVEKEIALKDVAISKGLLMMGPDC 174 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP-- 187 + + + + R+G +G+++ SGT E + G G S A G GG Sbjct: 175 GTAIING---VPVGFANAVRRGRIGVIAASGTGAQEVTSLIHELGSGISQAFGTGGRDLS 231 Query: 188 --VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 VKG L+ L D+ T+ IV++ + E A + D AK K +V F+ G Sbjct: 232 SAVKGRMARFALKALLDDDMTDVIVLISKPPAP---EVAASILDTAKGTSKPIVVCFLGG 288 Query: 246 KTAPPGRTMGHAGAVISGGKGGAE 269 + + + G + + A Sbjct: 289 DS----KMVRDHGLIPAETLEDAA 308 >gi|313498705|gb|ADR60071.1| PauA [Pseudomonas putida BIRD-1] Length = 706 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 85/238 (35%), Gaps = 22/238 (9%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK---- 114 +T++A+ + + +++ VP + DA+I E + + + G Sbjct: 61 YTSIADLPQVP--DVALLAVPAAATVDAVIACAERGVGSAIVFSAGFAETSEQGRLLQQQ 118 Query: 115 --ARLEKSSSRLIGPNCPGILTPDSCKIG----IMPGSIFRKGSVGILSRSGTLTYEAVF 168 S R++GPNC G+ G I G + I+S+SG Sbjct: 119 ITGIARDSGMRVLGPNCLGVFNAQRGYYGTFSAIFDAGFVAPGPLAIVSQSGAYGSHLAH 178 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 Q GLG + V G + + + L+ + + ++ E + A K Sbjct: 179 LARQRGLGINYWVTTGNE--CDVDVAEALDWIVGQPQVKVVMAYAEGIRDGQRFLAALDK 236 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPS 285 + IV G++ HA + + G++ +A +++ G+ A + Sbjct: 237 ARRNQ---VAIVFMKVGRSTVGA----HAVSSHTAALSGSDAVFDAVLRQYGVYRART 287 >gi|218131527|ref|ZP_03460331.1| hypothetical protein BACEGG_03146 [Bacteroides eggerthii DSM 20697] gi|217986459|gb|EEC52796.1| hypothetical protein BACEGG_03146 [Bacteroides eggerthii DSM 20697] Length = 687 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 91/262 (34%), Gaps = 26/262 (9%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE-SIEAEIP 96 ++PK V + V + + +++ +P +A+ + E ++ Sbjct: 42 RAVNPK------ETEVQGVAAYADVKDI---PDTDLAILAIPAVMCPNAVEVLAAEKQVR 92 Query: 97 LIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + ++ G R+ + K + LIGPNC G++ + P Sbjct: 93 AFIILSAGFGEETHEGALLEDRILETVNKYGASLIGPNCIGLMNTWHHSVFSQPIPNLHP 152 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA--DEATES 208 V ++S SG + +GL ++ +G G E DVL+ D +S Sbjct: 153 QGVDLVSSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQYMDEHFDPEKDS 210 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 + + I + + + + I +G + R A + +G + Sbjct: 211 GIKLLYIESIGDPD-RLLFHASSLIKKGCKIAAIKSGSSENGSR----AASSHTGAIASS 265 Query: 269 EDKINA-MKEAGICIAPSPARI 289 + + A ++AGI S + Sbjct: 266 DSAVEALFRKAGIVRCYSREEL 287 >gi|116248848|ref|YP_764689.1| putative pimeloyl-CoA synthetase [Rhizobium leguminosarum bv. viciae 3841] gi|115253498|emb|CAK11890.1| putative pimeloyl-CoA synthetase [Rhizobium leguminosarum bv. viciae 3841] Length = 701 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 102/286 (35%), Gaps = 32/286 (11%) Query: 11 VLVQGLTGKA---GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKE 67 V V G T +A ++ + + + + +HPK G P + A Sbjct: 18 VAVVGATERADASSSYVMKNLMRFGYQGKIIPVHPK---AEAVFGYRAAPSLRALDAA-- 72 Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSS 121 + +VI + A+ E+ + V + G LD ++ + Sbjct: 73 ---PDVAVIGIAADKVIAALEEAGSTGVKAAVVLASGFAELDEAGRERQRQLVEIAGRYG 129 Query: 122 SRLIGPNCPGI--LTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 + GPNC G+ LT + + +KG ILS SG G S Sbjct: 130 MAICGPNCLGLFNLTSGAALYSSSLSANLQKGRFAILSHSGASAIALGNTAR---FGLSH 186 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V G T+ LE +DE T ++ +V E + EE AA K A KP+ Sbjct: 187 IVSSGNSAA--TDIPAYLEFLASDEDTGTVGIVIEAIRAPEELAAAMEKMHAA---NKPV 241 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAP 284 + AG+++ A A +G G+ D A + GI P Sbjct: 242 IALRAGRSSRGA----QATAAHTGSLAGSNDAYRAFFRRTGIIEVP 283 >gi|29348333|ref|NP_811836.1| acetyl-CoA synthetase [Bacteroides thetaiotaomicron VPI-5482] gi|29340237|gb|AAO78030.1| acetyl-CoA synthetase [Bacteroides thetaiotaomicron VPI-5482] Length = 686 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 90/260 (34%), Gaps = 22/260 (8%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE-SIEAEIP 96 ++PK VP F V KE + +V+ VP D + + E + Sbjct: 42 RAVNPK------ETEVQGVPAFADV---KELPDTDLAVLAVPAVMCPDIVETLASEKQTR 92 Query: 97 LIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + ++ G R+ + K + LIGPNC G++ + P Sbjct: 93 AFIILSAGFGEETHEGALLEERILESVNKYGASLIGPNCIGLMNIWHHSVFSQPIPNLNS 152 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 V ++S SG + +GL ++ +G G E DVL+ + E Sbjct: 153 KGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQFMDENFDLEKDS 210 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + + + + L + RK +A A + A + +G ++ Sbjct: 211 RIKLLYIESIHNPDRLLFHASSLIRK---GCKIAAIKAGSSESGSRAASSHTGAIASSDS 267 Query: 271 KINA-MKEAGICIAPSPARI 289 + A ++AGI S + Sbjct: 268 AVEALFRKAGIVRCFSREEL 287 >gi|291326780|ref|ZP_06574073.1| protein FdrA [Providencia rettgeri DSM 1131] gi|291312921|gb|EFE53374.1| protein FdrA [Providencia rettgeri DSM 1131] Length = 521 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 80/182 (43%), Gaps = 12/182 (6%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPN 128 AN ++ + A + ++++ ++ ++ + D R+K + + ++GP+ Sbjct: 82 PNANVVLVSIAGEFAAELADQALDDGCN-VMMFSDNVSQADERRLKLKASERGLIVMGPD 140 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP- 187 C + ++ +G++GI+ SGT E + Q + G G + A+G+GG Sbjct: 141 CGTAYLAGAPLA---FSNVAPQGNIGIIGASGTGIQELISQITLAGQGITNAIGLGGRDL 197 Query: 188 ---VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + G + +EL +D ++ I V + A+E ++ + +G KP+V Sbjct: 198 TAEIGGVSAMTAIELLASDPQSDVIAFVSKP--PAKEIRSKVIDKLKAQG--KPVVALFL 253 Query: 245 GK 246 G Sbjct: 254 GT 255 >gi|311107593|ref|YP_003980446.1| CoA-binding protein [Achromobacter xylosoxidans A8] gi|310762282|gb|ADP17731.1| CoA binding domain protein 3 [Achromobacter xylosoxidans A8] Length = 694 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 86/271 (31%), Gaps = 29/271 (10%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 GGI+P G P V E + +V+ + + + + Sbjct: 39 YAGGIYPVNPKYQEVFGRRCWPDIEAVPE-----PVDLAVLAIAAADVTPMLRRCHAKGV 93 Query: 96 PLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCKIGIMPG---- 145 + G + A + +S + GPNC G ++ Sbjct: 94 RAAIVYAAGFAEAGGEGARLQDELEAFVAESGMAVAGPNCMGFANLNTQAHTAFASVFKT 153 Query: 146 --SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLAD 203 + G V +L++SG + + L S + G + +F LE AD Sbjct: 154 APAQTGPGKVSLLTQSGNVCAAVYAIARRLDLPFSHFINTGNEAC--LDFSQYLEYLAAD 211 Query: 204 EATESIVMVGEIGGSAEEEAAQFLKDEAKRGRK-KPIVGFVAGKTAPPGRTM-GHAGAVI 261 TE ++ E E +F++ + R+ K ++ AG T + H A+ Sbjct: 212 PQTEIVLGYIEQLRDGE----RFIRACRELERQGKLLIALKAGTTDKGAQAAQSHTSALA 267 Query: 262 SGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 G A ++ + A A++ Sbjct: 268 ----GDRRVYGAAFRQLNVIEANDFAQMAHL 294 >gi|331672051|ref|ZP_08372847.1| protein FdrA [Escherichia coli TA280] gi|331071040|gb|EGI42399.1| protein FdrA [Escherichia coli TA280] Length = 555 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 84/194 (43%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q + G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + LE+ D +E + V + EA + A + KP Sbjct: 226 LGGRDLSREVGGISALTALEMLSTDAKSEVLAFVSKPPA----EAVRLKIVNAMKATGKP 281 Query: 239 IVGFVAGKTAPPGR 252 V G T R Sbjct: 282 TVALFLGYTPAVAR 295 >gi|269127181|ref|YP_003300551.1| FdrA family protein [Thermomonospora curvata DSM 43183] gi|268312139|gb|ACY98513.1| FdrA family protein [Thermomonospora curvata DSM 43183] Length = 480 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 74/186 (39%), Gaps = 11/186 (5%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 A A +++ VP A ++++ A + ++VC + +P+ V +K + Sbjct: 110 ARLLAEPAGGLALVSVPGRYAFIEAMDALNAGLNVMVC-SGDVPLHQEVALKEAAGRRGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP C + + G+ + R G V I++ SGT + + G+G +G Sbjct: 169 IVMGPGCGTAVIGGA---GLGFANAVRPGPVSIVAASGTGAQQVMCLLDAAGVGVRHVLG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + L D ATE ++ + G A + A+R Sbjct: 226 VGGRDLSAEVSGRSTLAALAALDEDPATE---LIAVVAGPPAPRVADLVHSAARRLDTPV 282 Query: 239 IVGFVA 244 +A Sbjct: 283 HFAMLA 288 >gi|255689924|ref|ZP_05413599.1| CoA ligase family protein [Bacteroides finegoldii DSM 17565] gi|260624530|gb|EEX47401.1| CoA ligase family protein [Bacteroides finegoldii DSM 17565] Length = 686 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 89/260 (34%), Gaps = 22/260 (8%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE-SIEAEIP 96 ++PK VP F V + + +V+ VP S + + Sbjct: 42 RAVNPK------EKEVQGVPAFADVQDV---PDTDLAVLAVPASMCPGIVETLAGRKHTR 92 Query: 97 LIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + ++ G R+ + K + LIGPNC G++ + P Sbjct: 93 AFIILSAGFGEETHEGALLEERILETVNKYGASLIGPNCIGLMNTWHHSVFSQPIPNLSP 152 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIV 210 V ++S SG + +GL ++ +G G E DVL+ + +E Sbjct: 153 KGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQFMDENFDSEKDS 210 Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 + + + + + L + RK +A A + A + +G ++ Sbjct: 211 RIKLLYIESIQNPDRLLFHASSLIRK---GCKIAAIKAGSSESGSRAASSHTGAIASSDS 267 Query: 271 KINA-MKEAGICIAPSPARI 289 + A ++AGI S + Sbjct: 268 AVEALFRKAGIVRCFSREEL 287 >gi|325496415|gb|EGC94274.1| membrane protein FdrA [Escherichia fergusonii ECD227] Length = 555 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SACQKLPNASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ DE +E + V + EA + A + Sbjct: 223 AIGLGGRDLSREVCGISALTALEMLSVDEKSEVLAFVSKPPA----EAVRLKIVNAMKAT 278 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 279 GKPTVALFLGYTPAVAR 295 >gi|289522305|ref|ZP_06439159.1| acetyl-CoA synthetase / acetyltransferase family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504141|gb|EFD25305.1| acetyl-CoA synthetase / acetyltransferase family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 700 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 85/249 (34%), Gaps = 25/249 (10%) Query: 57 PVFTTVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 P + ++ K + ++I V D + + E ++P V + G D Sbjct: 50 PKYDSLHGFKCYPDIRSLPASPDVAIIGVRAGLVPDILEQCGEKKVPFAVIFSSGFAEAD 109 Query: 110 ----MVRVKARLEKSSSRLIGPNCPGILTP----DSCKIGIMPGSIFRKGSVGILSRSGT 161 ++ K + L+GPNC G++ + G + +S+SG Sbjct: 110 DPQLQDKIIYIANKWNIHLVGPNCQGLVNFVDGVPLSFSASLDAEPLEPGHIAYVSQSGA 169 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 + + + G+ V G + +D + D + +++ E + Sbjct: 170 FGFASFALGADSGVKFRYVVTTGNQ--VDLDVVDFGRFIIEDREVKLLILYME----GLK 223 Query: 222 EAAQFLK-DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI 280 + ++FL + + R+ PI GK+ A ++G + + K+ G+ Sbjct: 224 DGSKFLDLVQQAKKREIPIAVLKVGKSEVAKEAAKSHTAALTGDREVWDAV---FKQYGV 280 Query: 281 CIAPSPARI 289 I Sbjct: 281 ISISDVEDI 289 >gi|256832645|ref|YP_003161372.1| GCN5-related N-acetyltransferase [Jonesia denitrificans DSM 20603] gi|256686176|gb|ACV09069.1| GCN5-related N-acetyltransferase [Jonesia denitrificans DSM 20603] Length = 909 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 92/265 (34%), Gaps = 18/265 (6%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPL 97 + + + V + + T + +VI V + + I Sbjct: 254 TPVTIRDAQRRHGMRDTFVHHADVRSFLADDTTFDLAVITVADHATAPILAILADKGIHT 313 Query: 98 IVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGIL--TPDSCKIGIMPGSIFR 149 V ++ G + + R++GP G+ T D+ + S+ Sbjct: 314 AVMMSSGFAEKGAHGLRLQRDMLRTAHGAGIRIVGPASHGLFSSTSDAPFNASLAPSLPP 373 Query: 150 KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESI 209 G+VG+ +S + + + LG + + G D+++ + D T ++ Sbjct: 374 AGTVGLFCQSAAMAVTLLATVGRRRLGVANFLSAGNRADISGN--DLMQFWHDDTDTHAV 431 Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 M E G+ +F + + R+KP+V AG++ GHA S + + Sbjct: 432 GMYLESIGNP----RKFARIARRLSRRKPVVVVSAGQS-GHIVPRGHAVRQTSTPRKTLD 486 Query: 270 DKINAMKEAGICIAPSPARIGRSLV 294 + ++AG+ + + +L Sbjct: 487 ---HMFQQAGVIRTANTHELVDTLQ 508 >gi|163858101|ref|YP_001632399.1| acetyl-CoA synthetase [Bordetella petrii DSM 12804] gi|163261829|emb|CAP44131.1| acetyl-CoA synthetase [Bordetella petrii] Length = 707 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 87/247 (35%), Gaps = 24/247 (9%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK---- 114 + +V E + +VI VP + A I E + I V +T G + Sbjct: 64 YRSVTELPCAP--DLAVIVVPAAAAVGVIRECGQKGIKFAVVLTSGFSEAGDEGKRLEQE 121 Query: 115 --ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF----RKGSVGILSRSGTLTYEAVF 168 ++ R+ GPNCPG++ + IG + + G +G++++ G L + Sbjct: 122 ITDITRQTGIRVYGPNCPGLVNNNRG-IGFTFSPAYKLDRKAGPIGLVTQGGGLGRTFL- 179 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 Q S G+G G + D + ++ + IV + E E L Sbjct: 180 QASGRGMGIGLWCSSGNEA--DLTVSDYINHMVSMPEVKVIVTLLEGINDPERFVQAALN 237 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPSPA 287 KPIV GK+ + H A+ G AE A ++ GI Sbjct: 238 AARSG---KPIVALKVGKSEYGIKAAQSHTAAL----SGSAEVNSTAFRQLGIIEVNDID 290 Query: 288 RIGRSLV 294 + + Sbjct: 291 EMIDTAA 297 >gi|224367653|ref|YP_002601816.1| SucC3 [Desulfobacterium autotrophicum HRM2] gi|223690369|gb|ACN13652.1| SucC3 [Desulfobacterium autotrophicum HRM2] Length = 697 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 99/290 (34%), Gaps = 45/290 (15%) Query: 31 YCQTQVVGGIHPKKGS------TYWTGGNVNVPV------------FTTVAEAKERTAAN 72 V P KG PV + V++ + + Sbjct: 8 RGIAVVGATPSPGKGGNLIIKNMLNGYDGKIYPVNPRYEQIEGLTCYRDVSDVPD--PVD 65 Query: 73 ASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIG 126 +V++V S I I + + G K ++ RL G Sbjct: 66 LAVVFVSSSLVVPTIQACAHRGIAGAMIQSAGFSEAGEQGRKLQDQLVRIASETGIRLWG 125 Query: 127 PNCPGILTPDSCKIG-----IMPGSIFRKGSVGILSRSGTL-TYEAVFQTSQEGLGQSTA 180 PNC G++ + ++ ++ + G+V ++ +SG L + ++ G+G S + Sbjct: 126 PNCMGLVDAVNKRVFSTVETVIWDAGMTPGNVSLIVQSGMLAGAFLIDVMTRGGIGISKS 185 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 IG + D+LE +AD+ T I + E + + +F+ K KPIV Sbjct: 186 CSIGNK--MDVDESDILEYLMADDDTAVIGLYLE----SIVDGPRFMDLCRKS--TKPIV 237 Query: 241 GFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G++ R M H ++ G A+ + + A ++ Sbjct: 238 LLKGGRSEKGARAAMSHTASLAGNGA----VVSGALAQCNVVAATDFNQM 283 >gi|206577349|ref|YP_002237074.1| CoA binding domain/acetyltransferase domain protein [Klebsiella pneumoniae 342] gi|206566407|gb|ACI08183.1| CoA binding domain/acetyltransferase domain protein [Klebsiella pneumoniae 342] Length = 883 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 93/279 (33%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPTIESLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + + + ++ + + RL+GPN G+L P Sbjct: 77 TNARRNIELLEALGQKGCKTCIILSSQPEQYPAL--LECAARYQMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 +G + +S+S ++ + Q +G S + +G + + L Sbjct: 135 GLNASFSPVAIHRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + H Sbjct: 193 DFLARDSKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQKLLHV 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + A++ AG+ + ++ L Sbjct: 248 NSGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|288934037|ref|YP_003438096.1| GCN5-related N-acetyltransferase [Klebsiella variicola At-22] gi|288888766|gb|ADC57084.1| GCN5-related N-acetyltransferase [Klebsiella variicola At-22] Length = 883 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 93/279 (33%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGGFNGPVLPVTPAWKA----VLGVLAWPTIESLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + + + ++ + + RL+GPN G+L P Sbjct: 77 TNARRNIELLEALGQKGCKTCIILSSQPEQYPAL--LECAARYQMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 +G + +S+S ++ + Q +G S + +G + + L Sbjct: 135 GLNASFSPVAIHRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + H Sbjct: 193 DFLARDSKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQKLLHV 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + A++ AG+ + ++ L Sbjct: 248 NSGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|302557965|ref|ZP_07310307.1| GNAT family acetyltransferase [Streptomyces griseoflavus Tu4000] gi|302475583|gb|EFL38676.1| GNAT family acetyltransferase [Streptomyces griseoflavus Tu4000] Length = 507 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 66/181 (36%), Gaps = 18/181 (9%) Query: 55 NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------L 108 V + +V + +V+ VP + + E E + +V ++ G Sbjct: 299 GVAAYRSVRAIDA--PVDLAVVAVPADRVPEVVTECGEHGVQGLVVVSAGYAESGPDGRE 356 Query: 109 DMVRVKARLEKSSSRLIGPNCPGILT--PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEA 166 + + R+IGPN G++ PD + R G +G+ ++SG + Sbjct: 357 RQRALVRQARSYGMRIIGPNAFGVINTSPDVRLNASLAPESPRPGRIGLFAQSGAIGVAL 416 Query: 167 VFQTSQE------GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE 220 + + + G ST V G DV++ + D T+ +M E G+ Sbjct: 417 LSRLHRRGGGVTGVTGVSTFVSSGNRA--DVSGNDVMQYWYEDPDTDVALMYLESIGNPR 474 Query: 221 E 221 + Sbjct: 475 K 475 >gi|158313092|ref|YP_001505600.1| GCN5-related N-acetyltransferase [Frankia sp. EAN1pec] gi|158108497|gb|ABW10694.1| GCN5-related N-acetyltransferase [Frankia sp. EAN1pec] Length = 920 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 85/224 (37%), Gaps = 9/224 (4%) Query: 38 GGIHPKKGSTYWTGGNV-NVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIP 96 G ++P + G V +V + +V + + +V+ V + + Sbjct: 274 GPVYPVNPAAAAGEGAVASVRAYASVEDTPR--PVDLAVLCVSAEVIPAVVAACGRHGVR 331 Query: 97 LIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGIL 156 +V +T+ R+ + + R++GP GI P + + G +G Sbjct: 332 GLVVVTDQRDDAADARLASDARANGMRVVGPASLGIQNPAVGLNASLVERMPPAGRIGCY 391 Query: 157 SRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIG 216 S+SG L + + LG S V G D+L+ + AD +T +M E Sbjct: 392 SQSGPLGGALLEAAAGRRLGFSVFVSAGDRA--DVSGNDLLQYWEADPSTGVALMHLETF 449 Query: 217 GSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAV 260 G+ +F + + GR P+V ++ +T + AG + Sbjct: 450 GNP----RKFARLARRLGRDTPVVVVLSERTPLDEALLRQAGVI 489 >gi|306813019|ref|ZP_07447212.1| membrane protein FdrA [Escherichia coli NC101] gi|305853782|gb|EFM54221.1| membrane protein FdrA [Escherichia coli NC101] gi|315300611|gb|EFU59839.1| membrane protein FdrA [Escherichia coli MS 16-3] Length = 555 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + +++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SASQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + E + + K Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA---ETVRLKIVNAMKATG 279 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 280 -KPTVALFLGYTPAVAR 295 >gi|290508233|ref|ZP_06547604.1| hypothetical protein HMPREF0485_00004 [Klebsiella sp. 1_1_55] gi|289777627|gb|EFD85624.1| hypothetical protein HMPREF0485_00004 [Klebsiella sp. 1_1_55] Length = 883 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 93/279 (33%), Gaps = 25/279 (8%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPK-KGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 +AG + V + P K G + P ++ + +V+ Sbjct: 26 RAGYLMMRNLLAGAFNGPVLPVTPAWKA----VLGVLAWPTIESLP-----FTPDLAVLC 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDS 137 + + + + ++ + + RL+GPN G+L P Sbjct: 77 TNARRNIELLEALGQKGCKTCIILSSQPEQYPAL--LECAARYQMRLLGPNSLGLLAPWQ 134 Query: 138 CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL 197 +G + +S+S ++ + Q +G S + +G + + L Sbjct: 135 GLNASFSPVAIHRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVDDL--L 192 Query: 198 ELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + D T +I++ E +A +F+ R KPI+ +G++ P + + H Sbjct: 193 DFLARDSKTSAILLYLEHLS----DARRFVSAARSASRNKPILVIKSGRS-PAAQKLLHV 247 Query: 258 GAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 + + A++ AG+ + ++ L Sbjct: 248 NSGMDPAWD------AAIQRAGLLRVQDTHELFSAVETL 280 >gi|237707482|ref|ZP_04537963.1| membrane protein FdrA [Escherichia sp. 3_2_53FAA] gi|226898692|gb|EEH84951.1| membrane protein FdrA [Escherichia sp. 3_2_53FAA] Length = 555 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + +++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SASQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + E + + K Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA---ETVRLKIVNAMKATG 279 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 280 -KPTVALFLGYTPAVAR 295 >gi|324010023|gb|EGB79242.1| membrane protein FdrA [Escherichia coli MS 57-2] Length = 555 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + +++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SASQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + E + + K Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA---ETVRLKIVNAMKATG 279 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 280 -KPTVALFLGYTPAVAR 295 >gi|94314286|ref|YP_587495.1| putative acyl-CoA synthetase [Cupriavidus metallidurans CH34] gi|93358138|gb|ABF12226.1| putative Acyl-CoA synthetase [Cupriavidus metallidurans CH34] Length = 715 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 98/260 (37%), Gaps = 25/260 (9%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G + P + + + +VA + + + VP + +A+ +S Sbjct: 55 FQGRVFPVNAGRS---EVMGLQAYPSVAALPAA--IDHAFVMVPGAQVAEALEQSAARGA 109 Query: 96 PLIVCITEGIPVLDMVRVKARLEKS------SSRLIGPNCPGILTPDSCK----IGIMPG 145 ++ ++G + + A+ + RL+GPN G++ S ++ Sbjct: 110 RVVTVFSDGFAEVGEAGMAAQQALAARARELGVRLLGPNSIGVVDVHSGAVLSVNAVLEM 169 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 +G V ++S+SG++ + + + GLG + V +G + G ++++L + D A Sbjct: 170 DTLHRGPVSVISQSGSMLGALLSRGAARGLGFAKLVSVGNESDIGV--GELVDLLVDDAA 227 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGG 264 TE I++ E A A R KP++ + G++ H GA+ Sbjct: 228 TEVILLFLETIRDA---AVLGPALRRARAAGKPVLVYKLGRSEQGEALAQSHTGALAGND 284 Query: 265 KGGAEDKINAMKEAGICIAP 284 +++ G Sbjct: 285 A----AVDAFLRKHGAMRVE 300 >gi|320197010|gb|EFW71629.1| Protein fdrA [Escherichia coli WV_060327] Length = 555 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + +++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SASQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + E + + K Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA---ETVRLKIVNAMKATG 279 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 280 -KPTVALFLGYTPAVAR 295 >gi|91209592|ref|YP_539578.1| membrane protein FdrA [Escherichia coli UTI89] gi|117622774|ref|YP_851687.1| membrane protein FdrA [Escherichia coli APEC O1] gi|218557428|ref|YP_002390341.1| membrane protein FdrA [Escherichia coli S88] gi|91071166|gb|ABE06047.1| putative transport protein FdrA [Escherichia coli UTI89] gi|115511898|gb|ABI99972.1| putative transport protein FdrA [Escherichia coli APEC O1] gi|218364197|emb|CAR01862.1| putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli S88] gi|294490623|gb|ADE89379.1| bacterial FdrA protein [Escherichia coli IHE3034] gi|307628013|gb|ADN72317.1| membrane protein FdrA [Escherichia coli UM146] gi|315289982|gb|EFU49372.1| membrane protein FdrA [Escherichia coli MS 110-3] gi|323952871|gb|EGB48739.1| FdrA protein [Escherichia coli H252] gi|323958520|gb|EGB54225.1| FdrA protein [Escherichia coli H263] Length = 555 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + +++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SASQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + E + + K Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA---ETVRLKIVNAMKATG 279 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 280 -KPTVALFLGYTPAVAR 295 >gi|237721835|ref|ZP_04552316.1| acetyl-CoA synthetase [Bacteroides sp. 2_2_4] gi|229448704|gb|EEO54495.1| acetyl-CoA synthetase [Bacteroides sp. 2_2_4] Length = 686 Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 90/262 (34%), Gaps = 26/262 (9%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE-SIEAEIP 96 ++PK VP F V + + +V+ VP D + + + + Sbjct: 42 RAVNPK------EKEVQGVPAFADVNDL---PDTDLAVLAVPALMCPDMVETLASKKQTR 92 Query: 97 LIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + ++ G + + K + LIGPNC G++ + P Sbjct: 93 AFIILSAGFGEETHEGALLEECILETVNKYGASLIGPNCIGLMNTWHHSVFSQPIPNLNP 152 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA--DEATES 208 V ++S SG + +GL ++ +G G E DVL+ D +S Sbjct: 153 KGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQFMDENFDPEKDS 210 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 + + I + + L + RK +A A + A + +G + Sbjct: 211 HLKLLYIES--IQNPDRLLFHASSLIRK---GCKIAAIKAGSSESGSRAASSHTGAIASS 265 Query: 269 EDKINA-MKEAGICIAPSPARI 289 + + A ++AGI S + Sbjct: 266 DSAVEALFRKAGIVRCFSREEL 287 >gi|296535332|ref|ZP_06897536.1| N-acetyltransferase [Roseomonas cervicalis ATCC 49957] gi|296264347|gb|EFH10768.1| N-acetyltransferase [Roseomonas cervicalis ATCC 49957] Length = 285 Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 88/234 (37%), Gaps = 29/234 (12%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + +V+ +PP+ A + + ++ A + P L + E++ R +G + Sbjct: 75 PDLAVLCLPPA-AQEPAMAALAARGCFAAILPVAAPGLAGMC-----ERTGMRALGAHSF 128 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 G+ P + + + G + +L +SG + + + E LG S +GIG + G Sbjct: 129 GLCLPALGLNASLSHLMPKPGRLALLCQSGAVARAIIDWAAGEELGFSHILGIGTNH--G 186 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 F L+ D A ++++ + F+ R +P+V P Sbjct: 187 LGFALALDWLARDPAAGAVLLDLRRI----KNRRMFISAARATARTRPVVALR-----PG 237 Query: 251 GRTMGHAGAVISGGKGGAEDKI-NAMKEAGICIAPSPARI---GRSLVELLGSL 300 GR + G A+ + A++ AG+ + +L L +L Sbjct: 238 GRQI--------DASGIADAVMEAALRRAGVLRVNGLEDLLAAAETLARLRPAL 283 >gi|295110871|emb|CBL27621.1| Acyl-CoA synthetase (NDP forming) [Synergistetes bacterium SGP1] Length = 703 Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 87/265 (32%), Gaps = 26/265 (9%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P G +PV V E + +++ + DA+ + +I Sbjct: 47 YGGAIYPINPKADVISG---LPVHRNVTEV--EGPIDLAILSIKAKLIPDALRACADKKI 101 Query: 96 PLIVCITEGIPVLDMVRVK----ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR-- 149 P + + G ++ A R++GPNC G+ G+++ Sbjct: 102 PFALIYSSGFSETGDRALQEEVSAIARDGGIRVLGPNCQGLANFAEGIPLTFSGALYEVP 161 Query: 150 ---KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 G V ++S+SG + + + G+ G + ++ + L D Sbjct: 162 RPLPGHVALVSQSGAFGFSSFGVGLEHGVRFRYVATTGNQ--SDLDAVECADYVLDDPEV 219 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKG 266 +++ E E+ A FL+ K + V + +P R A Sbjct: 220 RLLMLYLE----GLEDGAGFLRLVRKARERDIAVAVLKAGRSPSARE----AAKSHTAAL 271 Query: 267 GAEDKI--NAMKEAGICIAPSPARI 289 +D++ + G+ I Sbjct: 272 TGDDRVWSAVFSQYGVIPMEDIDDI 296 >gi|293606457|ref|ZP_06688815.1| acetyl-CoA synthetase/acetyltransferase family protein [Achromobacter piechaudii ATCC 43553] gi|292815080|gb|EFF74203.1| acetyl-CoA synthetase/acetyltransferase family protein [Achromobacter piechaudii ATCC 43553] Length = 698 Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 91/269 (33%), Gaps = 25/269 (9%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 GGI+P G P +V E + +V+ + + + + Sbjct: 39 YAGGIYPVNPKYQEVFGKRCWPDIESVPE-----PVDLAVLAIAAAEVTPMLRRCHARGV 93 Query: 96 PLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCKIGIMPG---- 145 + G V+ A + +S + GPNC G ++ Sbjct: 94 RAAIVYAAGFAEAGGDGVRLQDEMEAFVAESGMAVAGPNCMGFANLNTQAHTAFASVFKT 153 Query: 146 --SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLAD 203 + G V +L++SG + + L S + G + +F LE +AD Sbjct: 154 APAQSGPGVVSLLTQSGNVCAAVYAIARRLDLPFSHFINTGNEAC--LDFSQYLEYLVAD 211 Query: 204 EATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISG 263 +TE ++ E E + ++ ++G K ++ AG T + + + ++G Sbjct: 212 PSTEIVLGYIEQLRDGE-RFVRACQELERQG--KLLIALKAGNTDKGAQAVRSHTSALAG 268 Query: 264 GKGGAEDKINAMKEAGICIAPSPARIGRS 292 + A ++ + A A++ Sbjct: 269 DR---RVYAAAFRQLNVIEATDFAQMAHL 294 >gi|218703802|ref|YP_002411321.1| membrane protein FdrA [Escherichia coli UMN026] gi|293403639|ref|ZP_06647730.1| membrane protein FdrA [Escherichia coli FVEC1412] gi|298379249|ref|ZP_06989130.1| membrane protein FdrA [Escherichia coli FVEC1302] gi|300897255|ref|ZP_07115696.1| membrane protein FdrA [Escherichia coli MS 198-1] gi|218430899|emb|CAR11773.1| putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli UMN026] gi|291429492|gb|EFF02512.1| membrane protein FdrA [Escherichia coli FVEC1412] gi|298280362|gb|EFI21866.1| membrane protein FdrA [Escherichia coli FVEC1302] gi|300358968|gb|EFJ74838.1| membrane protein FdrA [Escherichia coli MS 198-1] Length = 555 Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 85/197 (43%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ ++I V A + ++++ + ++ ++ + + D +++K R Sbjct: 110 SACQKLPDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ AD +E + V + EA + A + Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADAKSEVLAFVSKPPA----EAVRLKIVNAMKAT 278 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 279 GKPTVALFLGYTPAVAR 295 >gi|115958860|ref|XP_001181056.1| PREDICTED: similar to ATP-citrate lyase, partial [Strongylocentrotus purpuratus] Length = 121 Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 36/107 (33%), Positives = 46/107 (42%), Gaps = 9/107 (8%) Query: 95 IPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGS 146 I I I EGIP + K S +IGP G + P KIG I+ Sbjct: 1 IKTIAIIAEGIPENKTRILIDMANKKSVTIIGPATVGGIKPGCFKIGNTGGMLDNILSSK 60 Query: 147 IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 ++R GSV +SRSG ++ E S+ G V IGGD G F Sbjct: 61 LYRPGSVSYVSRSGGMSNELNNIISRNADGVYEGVAIGGDR-LGNNF 106 >gi|157382708|gb|ABV48792.1| ATP citrate lyase alpha subunit [enrichment culture clone BSaclA18] Length = 293 Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 38/97 (39%) Query: 204 EATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISG 263 + +V++GE+GG+ E + A+ +K+ K GHAGA Sbjct: 1 PQVKFMVLLGEVGGTLELKVAEAIKEGKITKPVIAWCIGTISKHFGGEVQFGHAGAKAGA 60 Query: 264 GKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 A+ K +++AG + S + + + L Sbjct: 61 ETETADAKNEILRQAGAYVPKSFNELPELIKGVYEEL 97 >gi|300709824|ref|YP_003735638.1| acetyl-CoA synthetase [Halalkalicoccus jeotgali B3] gi|299123507|gb|ADJ13846.1| acetyl-CoA synthetase [Halalkalicoccus jeotgali B3] Length = 705 Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 77/221 (34%), Gaps = 17/221 (7%) Query: 81 SGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE------KSSSRLIGPNCPGILT 134 + ++ E +P + IT G D + + GPN G+ Sbjct: 78 KYVLGVVEDAGEMGVPSALVITAGFAEADDEGAALEAKLGELGETYGMAICGPNTIGLAN 137 Query: 135 -PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ-TSQEGLGQSTAVGIGGDPVKGTE 192 D I GS+G++S+SG L + ++ + E + + V G + G Sbjct: 138 THDETVITSTCSRKPGAGSIGLVSQSGALAFTTFYERAADEDIDFAYIVATGNEA--GLS 195 Query: 193 FIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR 252 D +E + E+I E + + + G P++ G++A + Sbjct: 196 MADYVEFMADSDRVEAICAYIEGIDDPR-RFVESASEAVRGGT--PVLATKVGRSAVAEQ 252 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGI-CIAPSPARIGRS 292 ++G + A + AG+ + P +GRS Sbjct: 253 ASLSHTGSVTGDAAAWD---AAFERAGVERVPDIPDLLGRS 290 >gi|72057964|ref|XP_796094.1| PREDICTED: similar to ATP-citrate lyase, partial [Strongylocentrotus purpuratus] Length = 120 Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 36/107 (33%), Positives = 46/107 (42%), Gaps = 9/107 (8%) Query: 95 IPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIG--------IMPGS 146 I I I EGIP + K S +IGP G + P KIG I+ Sbjct: 1 IKTIAIIAEGIPENKTRILIDMANKKSVTIIGPATVGGIKPGCFKIGNTGGMLDNILSSK 60 Query: 147 IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 ++R GSV +SRSG ++ E S+ G V IGGD G F Sbjct: 61 LYRPGSVSYVSRSGGMSNELNNIISRNADGVYEGVAIGGDR-LGNNF 106 >gi|312092975|ref|XP_003147523.1| hypothetical protein LOAG_11959 [Loa loa] gi|307757313|gb|EFO16547.1| hypothetical protein LOAG_11959 [Loa loa] Length = 86 Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 5/63 (7%) Query: 2 SILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTT 61 ++ ++K+TKV+VQG TGK TFH +Q I Y T VVGG+ P K T + PVF T Sbjct: 29 ALRINKDTKVIVQGFTGKQATFHGQQMINY-NTNVVGGVTPSKAGTMH----LERPVFGT 83 Query: 62 VAE 64 V E Sbjct: 84 VKE 86 >gi|121610262|ref|YP_998069.1| CoA-binding domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121554902|gb|ABM59051.1| CoA-binding domain protein [Verminephrobacter eiseniae EF01-2] Length = 703 Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 91/275 (33%), Gaps = 27/275 (9%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIE 92 ++ G I+P G P + E E+ + P A Sbjct: 43 RSGYAGRIYPINPGRPQVQGLKAWPSLDRLPEVPEQV-----FVLTPTGQVLAAAHRCAA 97 Query: 93 AEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCK----IGI 142 + LI + G ++ S R++GP+ G++ P + Sbjct: 98 LGVKLITILASGFSESGREGLQREAELRDLARASGMRILGPSSLGVVNPRVGLVLTANAV 157 Query: 143 MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA 202 G V + S SG++ V + +G + V +G + ++ + L Sbjct: 158 FAEPELPVGKVFVASHSGSMIGALVSRGKARAVGFAGLVSVGSEA--DLSLGEICQATLD 215 Query: 203 DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 D E ++ E S AA A KP++ + G++ + G ++ Sbjct: 216 DPGIEGYLLFLE---SLRHGAALQRFARAAAACGKPVIAYKLGRSEAAAQMAGTHTGALA 272 Query: 263 GGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 G A+ +K+ GI ++ SL+E L Sbjct: 273 GADDIAD---AFLKDLGIARV----QMLESLLEAL 300 >gi|229819078|ref|YP_002880604.1| FdrA family protein [Beutenbergia cavernae DSM 12333] gi|229564991|gb|ACQ78842.1| FdrA family protein [Beutenbergia cavernae DSM 12333] Length = 562 Score = 73.1 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 8/158 (5%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPN 128 AN +++ +P A I ++ ++ + ++ + V D VR+K + + ++GP+ Sbjct: 113 PDANLALVSIPGEQAAPEIDRLLDKDLH-VFVFSDNLAVDDEVRLKHKARERGLLMMGPD 171 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD-- 186 C +I GS+GI+ SGT T E + Q + G G S A+G+GG Sbjct: 172 CGTGSLGGLPLAFT---NIVTPGSIGIVGASGTGTQEVMVQIDRAGGGVSQAIGLGGRDL 228 Query: 187 --PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEE 222 V + L AD T I +V + + E Sbjct: 229 SEKVGAVTCLQALRALDADPGTSVITLVSKPPAPSVRE 266 >gi|160896545|ref|YP_001562127.1| CoA-binding domain-containing protein [Delftia acidovorans SPH-1] gi|160362129|gb|ABX33742.1| CoA-binding domain protein [Delftia acidovorans SPH-1] Length = 702 Score = 73.1 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 95/285 (33%), Gaps = 31/285 (10%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 KAG + + + ++PK+ + + ++ E +A VI + Sbjct: 23 KAGGRPIDYLRRHGFAGRILPVNPKRA------EVQGLAAYPSLRALPEAP--DAVVISL 74 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVL---------DMVRVKARLEKSSSRLIGPNC 129 P AI + + L V + G L D+V R RL GPNC Sbjct: 75 PGEDVAAAIDDCVAVGARLAVIYSSGFAELGEEGRRQQADLVARARRSPGGGLRLFGPNC 134 Query: 130 PGILTPDSCKI----GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGG 185 G+ + I ++ + G V I+S+SG + G+G + G Sbjct: 135 QGVANFATGAILNFSTMINENAPADGPVAIVSQSGAGAAILYGGLRRAGIGVRYMLSTGN 194 Query: 186 DPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 + + + + DE +V+ E + A+ + RG I+ AG Sbjct: 195 EA--DVCAAEAVRAVVEDEGIRLVVLYIETLRQS-AWLAEAARLAHARGVT--ILAVKAG 249 Query: 246 K-TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + A H GA+ + +++ GI + Sbjct: 250 RTRAGQATASSHTGALAAEDALAD----AFLRQHGIPRLADFREL 290 >gi|34398404|gb|AAO48572.1| putative acyl-CoA synthetase [Mycobacterium rhodesiae JS60] Length = 662 Score = 73.1 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 80/224 (35%), Gaps = 17/224 (7%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE----KSSSRLIGP 127 + ++I P E + I+ ++ G A+ +R+IGP Sbjct: 56 DLAIIATPGDHVLRITQE-LSHRARAIIVLSAGFGETGTQGRDAQANLVHSARPARVIGP 114 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGS-VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 NC G+ + + + G + ++S++GT A + L + +G Sbjct: 115 NCFGLQDCNRRLNASISAGLPLGGGDISLVSQAGTYAMAAATHSYDARLRFGKVIALGNT 174 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 +++ D TE++ E +A F+++ + KP++ + AGK Sbjct: 175 --SDISASELVAELRDDPETETLCFALESL----PDARAFVEEVERTTPSKPVIVYKAGK 228 Query: 247 TAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 T R H GA+ + +++AG S + Sbjct: 229 TDVGARTAASHTGALAAPTTMLRHT----LRQAGAVQVDSGEEL 268 >gi|115524384|ref|YP_781295.1| CoA-binding domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115518331|gb|ABJ06315.1| CoA-binding domain protein [Rhodopseudomonas palustris BisA53] Length = 694 Score = 73.1 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 91/240 (37%), Gaps = 27/240 (11%) Query: 59 FTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR-- 116 + ++A+ E +++ V A + + + + V + G +D V KA+ Sbjct: 58 YPSLADLPEAPE--MAIVAVAGDNAIGVVEDCAARGVKIAVVMASGFGEVDPVEGKAKER 115 Query: 117 -----LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAV 167 ++ R++GPN G+ + I +G V +LS+SG L+ V Sbjct: 116 RMVEAAHRAGMRIVGPNSQGLANFGTGAIASFSTMFTEFDRAEGHVAMLSQSGALSTVPV 175 Query: 168 FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGE--IGGSAEEEAAQ 225 Q+G+G + G D ++ D + +++ E S EE A Sbjct: 176 GFLRQKGIGVRHSHATGNDA--DVTVGELACAVAEDPQVKLMLLYLESIPDKSYLEELAS 233 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAP 284 +D R PI+ +G+T A +G + ++A ++ GI AP Sbjct: 234 IARD-----RDLPIIALKSGRTDAGK----QAAQSHTGALANEDRVVDAFFEQHGIWRAP 284 >gi|323530212|ref|YP_004232364.1| CoA-binding domain-containing protein [Burkholderia sp. CCGE1001] gi|323387214|gb|ADX59304.1| CoA-binding domain protein [Burkholderia sp. CCGE1001] Length = 702 Score = 73.1 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 94/262 (35%), Gaps = 27/262 (10%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPL 97 G ++P + G P + E + I P A D + E + +P+ Sbjct: 48 GDVYPINPNRDTVLGEKAWPSLRDLPVVPEH-----AFILTPTDAAIDGLQECADLGVPV 102 Query: 98 IVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCK----IGIMPGSI 147 + G RV+ +E++ R++GP+ G++ Sbjct: 103 ATILAAGFSESGPEGEAREERVRKIVEQTGIRVLGPSGLGMVNVRRKLALTANAAFAEPD 162 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 G + + S SG++ V + G+G + V +G + ++ L D Sbjct: 163 LPVGGIFVASHSGSMIGALVSRGKARGVGFAGLVSVGNE--VDLSVGEICAATLDDPEVT 220 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK-TAPPGRTMGHAGAVISGGKG 266 ++ E +++ ++ AK KP+V + G+ +A + H GA+ Sbjct: 221 GYMLFLETLRHSDKLRQFAIQAAAKG---KPVVAYKLGRSSAAAELAVSHTGALA----- 272 Query: 267 GAEDKINAM-KEAGICIAPSPA 287 G +D +A ++ GI + Sbjct: 273 GEDDVADAFLRDCGIARVETLD 294 >gi|294672939|ref|YP_003573555.1| CoA-binding domain-containing protein [Prevotella ruminicola 23] gi|294472829|gb|ADE82218.1| CoA-binding domain protein [Prevotella ruminicola 23] Length = 686 Score = 73.1 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 87/273 (31%), Gaps = 23/273 (8%) Query: 33 QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAA------NASVIYVPPSGAGDA 86 + K + ++ P V K + +V+ V D Sbjct: 22 HKPGGAIVRNIKNGGFDGPLHIVNPKEDEVQGIKAYHDVKDIPNTDLAVLVVAAKFCPDY 81 Query: 87 I-IESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRLIGPNCPGILTPDSCK 139 + E + V I+ G R+ +K + LIGPNC G+L + Sbjct: 82 VDYLCAEKGVRAFVIISAGFGEETKAGAELEQRILDTCKKFGAALIGPNCIGLLNRNHHS 141 Query: 140 IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLEL 199 + +P V +S SG + +GL ++ IG G E DVL+ Sbjct: 142 VFTLPIPNLNPQGVDFVSGSGATAVFILESAVIKGLQFNSVWSIGNGKQIGIE--DVLQY 199 Query: 200 FLA--DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHA 257 + T+S V + I + + K +A A + A Sbjct: 200 MDERFNPETDSKVKLLYIENISNPD-----KLLYHASNLIRKGCRIAAIKAGSSESGSRA 254 Query: 258 GAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 + +G ++ + A ++AGI S + Sbjct: 255 ASSHTGAIASSDSAVEALFRKAGIVRCFSREEL 287 >gi|215485595|ref|YP_002328026.1| membrane protein FdrA [Escherichia coli O127:H6 str. E2348/69] gi|312964414|ref|ZP_07778708.1| protein fdrA [Escherichia coli 2362-75] gi|215263667|emb|CAS07999.1| predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain [Escherichia coli O127:H6 str. E2348/69] gi|312290891|gb|EFR18767.1| protein fdrA [Escherichia coli 2362-75] Length = 555 Score = 73.1 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 86/193 (44%), Gaps = 17/193 (8%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + +++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SASQKLPDANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ ADE +E + V + E + + K Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA---ETVRLKIVNAMKATG 279 Query: 236 KKPIVGFVAGKTA 248 K + F+ A Sbjct: 280 KTTVALFLGYTPA 292 >gi|323975989|gb|EGB71082.1| FdrA protein [Escherichia coli TW10509] Length = 555 Score = 73.1 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + +++ AN ++I V A + ++++ + ++ ++ + + D +++K R + Sbjct: 110 SASQKLPNANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ D +E + V + EA + A + Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSTDAKSEVLAFVSKPPA----EAVRLKIVNAMKAT 278 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G R Sbjct: 279 GKPTVALFLGYIPAVAR 295 >gi|295085630|emb|CBK67153.1| Acyl-CoA synthetase (NDP forming) [Bacteroides xylanisolvens XB1A] Length = 686 Score = 73.1 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 91/262 (34%), Gaps = 26/262 (9%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE-SIEAEIP 96 ++PK VP F V + + +V+ VP D + + + + Sbjct: 42 RAVNPK------EKEVQGVPAFADVNDL---PDTDLAVLAVPALMCPDMVETLASKKQTR 92 Query: 97 LIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + ++ G R+ + K + LIGPNC G++ + P Sbjct: 93 AFIILSAGFGEETHEGALLEERILETVNKYGASLIGPNCIGLMNTWHHSVFSQPIPNLNP 152 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA--DEATES 208 V ++S SG + +GL ++ +G G E DVL+ D +S Sbjct: 153 KGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQFMDENFDPEKDS 210 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 + + I + + L + RK +A A + A + +G + Sbjct: 211 HLKLLYIES--IQNPDRLLFHASSLIRK---GCKIAAIKAGSSESGSRAASSHTGAIASS 265 Query: 269 EDKINA-MKEAGICIAPSPARI 289 + + A ++AGI S + Sbjct: 266 DSAVEALFRKAGIVRCFSREEL 287 >gi|150008422|ref|YP_001303165.1| acetyl-CoA synthetase [Parabacteroides distasonis ATCC 8503] gi|255014157|ref|ZP_05286283.1| acetyl-CoA synthetase [Bacteroides sp. 2_1_7] gi|256841594|ref|ZP_05547101.1| acetyl coenzyme A synthetase (ADP forming), alpha domain-containing protein [Parabacteroides sp. D13] gi|262383257|ref|ZP_06076393.1| acetyl-CoA synthetase [Bacteroides sp. 2_1_33B] gi|298376329|ref|ZP_06986285.1| CoA ligase family protein [Bacteroides sp. 3_1_19] gi|301309312|ref|ZP_07215254.1| CoA ligase family protein [Bacteroides sp. 20_3] gi|149936846|gb|ABR43543.1| acetyl-CoA synthetase [Parabacteroides distasonis ATCC 8503] gi|256737437|gb|EEU50764.1| acetyl coenzyme A synthetase (ADP forming), alpha domain-containing protein [Parabacteroides sp. D13] gi|262294155|gb|EEY82087.1| acetyl-CoA synthetase [Bacteroides sp. 2_1_33B] gi|298267366|gb|EFI09023.1| CoA ligase family protein [Bacteroides sp. 3_1_19] gi|300832401|gb|EFK63029.1| CoA ligase family protein [Bacteroides sp. 20_3] Length = 686 Score = 73.1 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 92/256 (35%), Gaps = 32/256 (12%) Query: 50 TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE--SIEAEIPLIVCITEGIPV 107 V + +V + E ++I +P + ++E + + + + I+ G Sbjct: 48 ETDVQGVKSYPSVHDIPE---TELAIISIPSKSCPE-VMEVLARQKGVKAFIVISAGFGE 103 Query: 108 LD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGT 161 ++ + ++ + LIGPNC G++ + + P F V +S SG Sbjct: 104 ETHEGGILEQQMLDVVNEAGASLIGPNCIGLMNMNYHGVFTQPIPEFHPDGVDFISSSGG 163 Query: 162 LTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA--DE--ATESIVMVGEIGG 217 + +GL S+ +G G E D+LE D ++ ++ E Sbjct: 164 TALFIIESALTKGLRFSSVWSVGNSKQNGVE--DILEYMDRNFDPVLDSKIKMLYIEQIK 221 Query: 218 SAE---EEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA 274 + A+ ++ K I AG T R A + +G ++ + A Sbjct: 222 QPDKLLYHASSLIRKGCK------IAAIKAGSTESGKR----AASSHTGAIASSDSAVEA 271 Query: 275 -MKEAGICIAPSPARI 289 ++AGI S + Sbjct: 272 LFRKAGIVRCFSREEL 287 >gi|299134539|ref|ZP_07027731.1| CoA-binding domain protein [Afipia sp. 1NLS2] gi|298590349|gb|EFI50552.1| CoA-binding domain protein [Afipia sp. 1NLS2] Length = 710 Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 79/231 (34%), Gaps = 18/231 (7%) Query: 77 YVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCP 130 +P S + + E +P+ V + G L K A + RL GPNC Sbjct: 88 VLPASEVLNCVRELGAKGVPVAVIFSSGFSELGDAGRKYEQDVVAAAREGGVRLCGPNCL 147 Query: 131 GILTPDSCKIGIM---PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 G++ + S G +G +++SG + GLG V G + Sbjct: 148 GLINSFESVLATFSQYADSDTPSGPIGFVTQSGAFGTAIAALARRRGLGLGYFVNTGNEA 207 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 F +++ + D + E E+ A L ++A K ++ V Sbjct: 208 --DLTFSEIMGEVIRDPRIKMGAGYIEGLKGGEDFVA--LAEQAMVAGKPLVMTKVGRLG 263 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 A H G++ G +++ GI A + + + E++ Sbjct: 264 AGARAAASHTGSLA----GDDVVFDGVVRQHGIIRARNEEHMLD-IAEVMS 309 >gi|225574413|ref|ZP_03783023.1| hypothetical protein RUMHYD_02482 [Blautia hydrogenotrophica DSM 10507] gi|225038374|gb|EEG48620.1| hypothetical protein RUMHYD_02482 [Blautia hydrogenotrophica DSM 10507] Length = 502 Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 90/264 (34%), Gaps = 34/264 (12%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 +HPKK T G + +++ E V+ + E+ + Sbjct: 42 FVHPKK--TELFGKKC----YPSISALPEVPEC--VVLATNCHTIPALLEEAGAFGVKAA 93 Query: 99 VCITEGIPVLDMV-------RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF--- 148 V G + ++K K + GPNC G+L + K+ + G Sbjct: 94 VIYASGFSEENTEEGIALEEQIKGIARKYDMCICGPNCMGMLN-NVDKVNMWGGHTHWDL 152 Query: 149 --RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEAT 206 + I+++SG + E + + S A+ G + + LE + DE Sbjct: 153 EDDAHGIAIIAQSGFICAEILN--TDF-FNISYAISSGNGNI--VTLEEFLEFVVEDEHV 207 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG-RTMGHAGAVISGGK 265 + + E +E K R KP+V +G++ H G++ Sbjct: 208 SVVALYLEGVRDSERFVRALKKAAMMR---KPVVILKSGRSVRGAISAASHTGSMA---- 260 Query: 266 GGAEDKINAMKEAGICIAPSPARI 289 G + ++ ++ G+ +A + Sbjct: 261 GSNKSYMSIFEKYGVVVAETLEEF 284 >gi|311108074|ref|YP_003980927.1| CoA-binding protein [Achromobacter xylosoxidans A8] gi|310762763|gb|ADP18212.1| CoA binding domain protein 4 [Achromobacter xylosoxidans A8] Length = 713 Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 91/282 (32%), Gaps = 26/282 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK + + ++P + + + ++A E + +++ Sbjct: 44 GKIAGRPLAYMLSRGFVGKLFPVNPTR------DQVQGLKSYPSLAAIGE--PVDLAIVG 95 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPG 131 P + D I E + A + V + G R+ ++GPNC G Sbjct: 96 TPAALVEDVIREGVAAGVKAFVVFSSGFSETSEEGAALQRRLGELARAKGVTVLGPNCLG 155 Query: 132 ILTPDSCKIGIM----PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + + I + ++G +S+SG L + + GLG S + G + Sbjct: 156 VANSATGLIASFTTALEETPIKQGGFAFVSQSGALGAYWMDICLRSGLGFSKWITTGNE- 214 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 + + D T I + E AE L+ A KP++ AG++ Sbjct: 215 -CDMDAAAAVAYLADDPLTRVIGLYVEDIRDAEAFRRALLRAAAAG---KPVIAIKAGRS 270 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 ++G + +++ G S ++ Sbjct: 271 RAGAAAAASHTGALAGDDTLYD---ACLRQHGALRVDSLGQM 309 >gi|296283518|ref|ZP_06861516.1| pimeloyl-CoA synthetase [Citromicrobium bathyomarinum JL354] Length = 716 Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 76/247 (30%), Gaps = 19/247 (7%) Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----- 111 P F + + + VI PP+ + + + V +T G Sbjct: 53 PAFAQILDIPAD-RVDLLVIATPPATITEILDQGAAKGAKAAVILTSGFTETGQAGAALE 111 Query: 112 -RVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG----SIFRKGSVGILSRSGTLTYEA 166 + A + RL+GPNC G T + G + I+S+SG Sbjct: 112 AEIVATARRHGIRLLGPNCLGFYTAKGGIAATFSSLLEDAPPPAGPLAIVSQSGAYGAHI 171 Query: 167 VFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + GLG ++ G + + D++E D I E Sbjct: 172 TMLARRRGLGLASFAATGNE--CDIDIADLIEAAADDANVTVIGCYAEGIRDGRLVLRAI 229 Query: 227 LKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSP 286 E R KP+V G + + A ++G + +K +G + Sbjct: 230 ---ETARAAGKPVVILKVGTSDTGKKAAQSHTASLAGDDATLDQL---LKRSGAIRVSTT 283 Query: 287 ARIGRSL 293 + ++ Sbjct: 284 QEMIDTM 290 >gi|331661905|ref|ZP_08362828.1| protein FdrA [Escherichia coli TA143] gi|331060327|gb|EGI32291.1| protein FdrA [Escherichia coli TA143] Length = 305 Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 85/197 (43%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ ++I V A + ++++ + ++ ++ + + D +++K R Sbjct: 110 SACQKLPDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ AD +E + V + EA + A + Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADAKSEVLAFVSKPPA----EAVRLKIVNAMKAT 278 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 279 GKPTVALFLGYTPAVAR 295 >gi|167584904|ref|ZP_02377292.1| GCN5-related N-acetyltransferase [Burkholderia ubonensis Bu] Length = 644 Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 23/153 (15%) Query: 144 PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLAD 203 P R G V +S+S LT + GLG S V +GG+ + DVL+ +D Sbjct: 4 PAYTVRSGGVAWVSQSNALTNAVLGWADARGLGFSHVVALGGEA--DVDAGDVLDYLASD 61 Query: 204 EATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISG 263 T +I++ + + A +F+ R KP++ G+ A PG + A Sbjct: 62 PGTRAILLELDSVRA----ARKFMSAARAAARNKPVLALRTGR-ADPGDALYTA------ 110 Query: 264 GKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A + AG+ + + + L Sbjct: 111 ----------AFQRAGMVRVDALDDLLDEIETL 133 >gi|163800668|ref|ZP_02194569.1| putative acetyltransferase [Vibrio sp. AND4] gi|159176111|gb|EDP60905.1| putative acetyltransferase [Vibrio sp. AND4] Length = 877 Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 103/303 (33%), Gaps = 45/303 (14%) Query: 4 LVDKNTKVLVQGLTGKA---GTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60 L N+ V V G + K G + + + PK + Sbjct: 7 LFKPNS-VAVIGASPKELRAGQVVMRNLLQSGFDGAIMPVTPK---------------YK 50 Query: 61 TVAEAKERTA-------ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV 113 +V+ + +++ + + + E + I++ +D+ + Sbjct: 51 SVSGVIAYPNVASLPYTPDIAILCTNVARNKPLLKDLDERGTEFAIVISDDAENIDVTEL 110 Query: 114 KARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQE 173 + R+IGPN G++ P G + +S+S + + + + Sbjct: 111 -------NIRVIGPNSLGVILPWHHFNCSFSPVAALPGKIAFISQSAAVCTTVLDWANDK 163 Query: 174 GLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKR 233 +G S + IG +F +L+ D TE+I++ + ++A +F+ Sbjct: 164 NIGFSAFISIGQGR--DVDFAQLLDYLSMDVKTEAILLYVDTI----KDARRFMSAARAA 217 Query: 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSL 293 R + I+ AGK+ RT+G +A++ G+ + + ++ Sbjct: 218 SRNRRILVLKAGKS-TQARTLGD-----QDVDSLDVIYDSAIRRTGMLRVGNTHELFAAV 271 Query: 294 VEL 296 L Sbjct: 272 ETL 274 >gi|241765036|ref|ZP_04763030.1| CoA-binding domain protein [Acidovorax delafieldii 2AN] gi|241365348|gb|EER60159.1| CoA-binding domain protein [Acidovorax delafieldii 2AN] Length = 713 Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 85/270 (31%), Gaps = 27/270 (10%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P G + V + + +V+ + + I Sbjct: 39 YAGDVYPINPKYEEVFG---YRCYPDVEALPQAP--DLAVLAIAAEDVTSMLERCHARGI 93 Query: 96 PLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMP----- 144 + G R++ +++ + GPNC G ++ Sbjct: 94 RAAIVYAAGFAEAGSAGVELQARLEQFAQRTGMVIAGPNCMGFANINTHAYTAFAAVFKN 153 Query: 145 -GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLAD 203 + G I+++SG + + G+ S + G + V EF + LE D Sbjct: 154 VPVQTQCGRASIITQSGNVCSAVFALIRKLGIPVSHFINTGNEAV--VEFSEYLEYMAQD 211 Query: 204 EATESIVMVGEIGGSAEEEAAQFLKDEAKRGR-KKPIVGFVAGKTAPPGRTMGHAGAVIS 262 +ATE ++ E +F+ KKP++ + AG+T + + ++ Sbjct: 212 DATECVIGYVEQL----RNGPRFIHAALALAAQKKPLIIYKAGETDKGSEAVRSHTSALA 267 Query: 263 GGKGGAEDKINAMKEAGICIAPSPARIGRS 292 G + + + A++ Sbjct: 268 GDLALYK---AGFAQLNVIRGNDFAQMADL 294 >gi|1841540|gb|AAB47486.1| ATP citrate lyase [Drosophila melanogaster] Length = 391 Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 6/98 (6%) Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPG---RTMGHAGAVIS 262 T+ IV++GE+GG+ E + LKD KP+V + G A GHAG+ + Sbjct: 1 TKLIVLLGEVGGTEEYDVCAALKDGRI---TKPLVAWCIGTCASMFTSEVQFGHAGSCAN 57 Query: 263 GGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 + A K +++AG + S +G + + G L Sbjct: 58 SDRETATAKNKGLRDAGAYVPDSFDTLGELIHHVYGEL 95 >gi|299144830|ref|ZP_07037898.1| CoA ligase family protein [Bacteroides sp. 3_1_23] gi|298515321|gb|EFI39202.1| CoA ligase family protein [Bacteroides sp. 3_1_23] Length = 686 Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 92/262 (35%), Gaps = 26/262 (9%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE-SIEAEIP 96 ++PK VP F V++ + +V+ +P D + + + + Sbjct: 42 RAVNPK------EKEVQGVPAFADVSDL---PDTDLAVLAIPAVMCPDIVETLASKKQTR 92 Query: 97 LIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + ++ G R+ + K + LIGPNC G++ + P Sbjct: 93 AFIILSAGFGEETHEGALLEERILETVNKYGASLIGPNCIGLMNTWHHSVFSQPIPNLNP 152 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA--DEATES 208 V ++S SG + +GL ++ +G G E DVL+ D +S Sbjct: 153 RGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQFMDENFDPEKDS 210 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 + + I + + L + RK +A A + A + +G + Sbjct: 211 HLKLLYIES--IQNPDRLLFHASSLIRK---GCKIAAIKAGSSESGSRAASSHTGAIASS 265 Query: 269 EDKINA-MKEAGICIAPSPARI 289 + + A ++AGI S + Sbjct: 266 DSAVEALFRKAGIVRCFSREEL 287 >gi|319763887|ref|YP_004127824.1| CoA-binding domain protein [Alicycliphilus denitrificans BC] gi|317118448|gb|ADV00937.1| CoA-binding domain protein [Alicycliphilus denitrificans BC] Length = 699 Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 90/272 (33%), Gaps = 22/272 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P G P + E E + D + E + Sbjct: 46 FAGAVYPINPRRGTVQGERAWPSLAVLPEVPEHV-----FVMTATEHVLDTLRECERLGV 100 Query: 96 PLIVCITEGIPVL------DMVRVKARLEKSSSRLIGPNCPGILTPDSCK----IGIMPG 145 + + G V+A SS RL+GP G+ P S Sbjct: 101 KVATVLAGGFSEAGPEGVAREEAVRAFARTSSLRLVGPASLGVAHPGSGLLLTANAAFAE 160 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 G V + S SG++ + + G+G + V +G + ++ L D Sbjct: 161 RELPPGKVFVASHSGSMLGALLSRGKARGVGFAGMVSVGVEA--DLSLGEICSATLDDPE 218 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK-TAPPGRTMGHAGAVISGG 264 +S ++ E + +F ++ A+RG KP++ + G+ A H GA+ +G Sbjct: 219 IDSYLLFLESLRRG-ADLQRFAREAARRG--KPVIAYKLGRSQAAAEMATTHTGAL-AGE 274 Query: 265 KGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A+ + + A + + + + Sbjct: 275 DDVADAFLRGLGVARVGVLEALLEAPALARRI 306 >gi|119714149|ref|YP_919291.1| CoA-binding domain-containing protein [Nocardioides sp. JS614] gi|119526058|gb|ABL79428.1| CoA-binding domain protein [Nocardioides sp. JS614] Length = 693 Score = 72.4 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 81/234 (34%), Gaps = 18/234 (7%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRL 124 + +V+ VP S + ++ IP V IT G V A R+ Sbjct: 70 IDLAVLVVPASAVAAVVRDAGAKGIPACVVITSGFAEAGPEGERLQAEVMAIARAGGVRI 129 Query: 125 IGPNCPGILTPDSCKIGIM-PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGI 183 +GPNC G+ + + P GS+ ++++SG E L + Sbjct: 130 VGPNCFGVQNAEVGFNASLSPRLTASAGSLSLVTQSGAYGMALHSLAQDENLRFNKVYAT 189 Query: 184 GGD-PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 G + TE +D L D S + + + F + + R +P++ Sbjct: 190 GNKADLTDTELLDYL-----DSEGGSGPICFFLESLP--DGRAFFEAARRVTRNRPVIVC 242 Query: 243 VAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 G++ R A ++G + A +AG+ + S + + L Sbjct: 243 RTGRSTAGSRAACSHTASLAGQQRVWS---AAFAQAGVIVTKSGLEMLDAARAL 293 >gi|330823849|ref|YP_004387152.1| CoA-binding domain-containing protein [Alicycliphilus denitrificans K601] gi|329309221|gb|AEB83636.1| CoA-binding domain protein [Alicycliphilus denitrificans K601] Length = 699 Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 90/272 (33%), Gaps = 22/272 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P G P + E E + D + E + Sbjct: 46 FAGAVYPINPRRGTVQGERAWPSLAVLPEVPEHV-----FVMTATEHVLDTLRECERLGV 100 Query: 96 PLIVCITEGIPVL------DMVRVKARLEKSSSRLIGPNCPGILTPDSCK----IGIMPG 145 + + G V+A SS RL+GP G+ P S Sbjct: 101 KVATVLAGGFSEAGPEGVAREEAVRAFARTSSLRLVGPASLGVAHPGSGLLLTANAAFAE 160 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 G V + S SG++ + + G+G + V +G + ++ L D Sbjct: 161 RELPPGKVFVASHSGSMLGALLSRGKARGVGFAGMVSVGVEA--DLSLGEICSATLDDPE 218 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK-TAPPGRTMGHAGAVISGG 264 +S ++ E + +F ++ A+RG KP++ + G+ A H GA+ +G Sbjct: 219 IDSYLLFLESLRRG-ADLQRFAREAARRG--KPVIAYKLGRSQAAAEMATTHTGAL-AGE 274 Query: 265 KGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A+ + + A + + + + Sbjct: 275 DDVADAFLRGLGVARVGVLEALLEAPALARRI 306 >gi|269980470|gb|ACZ56342.1| putative acyl-CoA synthetase [Mycobacterium chubuense NBB4] Length = 663 Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 80/224 (35%), Gaps = 17/224 (7%) Query: 72 NASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLE----KSSSRLIGP 127 + ++I P E + I+ ++ G A+ +R+IGP Sbjct: 56 DLAIIATPGEHVLRITQE-LSHRARAIIVLSAGFGETGTQGRDAQASLVHSARPARVIGP 114 Query: 128 NCPGILTPDSCKIGIMPGSIFRKGS-VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 NC G+ + + + G V ++S++GT A + L + +G Sbjct: 115 NCFGLQDCNRRLNASISAGLPLGGGDVSLVSQAGTYAMAAATHSYDARLRIGKVIALGNT 174 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK 246 +++ D TE++ E +A F+++ + KP++ + AGK Sbjct: 175 --SDISASELVAELRNDPETETLCFALESL----PDARAFVEEVERTTPSKPVIVYKAGK 228 Query: 247 TAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 T R H GA+ + +++AG S + Sbjct: 229 TDAGARTAASHTGALAAPTTMLRHT----LRQAGAVQVDSGEEL 268 >gi|332285531|ref|YP_004417442.1| putative Acetyl-CoA synthetase [Pusillimonas sp. T7-7] gi|330429484|gb|AEC20818.1| putative Acetyl-CoA synthetase [Pusillimonas sp. T7-7] Length = 694 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 88/286 (30%), Gaps = 32/286 (11%) Query: 19 KAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV 78 + G E Y + ++PK + + + + + +V+ + Sbjct: 25 RIGGMPIELLTRYGYNGDIYPVNPK------YQEVFGLKCYPDIESLPKAP--DLAVLAI 76 Query: 79 PPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGI 132 + + + G + A EKS + GPN G+ Sbjct: 77 GAKDVTPMLERCHAKGVKAAIVYAAGFAEEGPIGRALQDQLEAFAEKSGMVVAGPNLMGL 136 Query: 133 LTPDSCK------IGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 ++ + G+V +L++SG + + GL S + G + Sbjct: 137 ANLNTQAHTAFASVFNTAPMQESPGNVSMLTQSGNVCAALYALVRKLGLPVSHFINTGNE 196 Query: 187 PVKGTEFIDVLELFLADEATESIVMVGEI--GGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 EF + L D TE ++ E G +A Q L+ K ++ A Sbjct: 197 AC--VEFSEYLNFLANDPQTEVVLGYIEQLRDGPGFIQACQTLQQN-----DKLLIALKA 249 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIG 290 G T + + ++G K ++ + A A++ Sbjct: 250 GTTDKGAVAVQSHTSALAGDKRVYRSV---FEKLNVIEAHDFAQMA 292 >gi|157382782|gb|ABV48828.1| ATP citrate lyase alpha subunit [Sulfurovum lithotrophicum] Length = 308 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 6/100 (6%) Query: 204 EATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAP---PGRTMGHAGAV 260 + ++++GE+GG+ E + + +KD KKPI+ + G A G GHAGA Sbjct: 1 PDVKYMILLGEVGGTEEYKVIEAVKDGRI---KKPIIAWCIGTIAKHFSSGVQFGHAGAS 57 Query: 261 ISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 + A K AM EAGI + S + ++ E+ L Sbjct: 58 ANADAETAAAKNKAMAEAGIYVPESFNDLPATIAEVYNDL 97 >gi|152994673|ref|YP_001339508.1| GCN5-like N-acetyltransferase [Marinomonas sp. MWYL1] gi|150835597|gb|ABR69573.1| GCN5-related N-acetyltransferase [Marinomonas sp. MWYL1] Length = 810 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 86/246 (34%), Gaps = 37/246 (15%) Query: 52 GNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE------SIEAEIPLIVCITEGI 105 + P+F+T+ E V ++ + + L++ T Sbjct: 53 TEFSFPLFSTLGELTTSPDLAVLVGSYSAKECQPSMEDIIAACGAANIGSLLMLSWTG-- 110 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 + L K + RL+GPN GI P + + G + ++S+SGT+ Sbjct: 111 --DSQESLVEALRKHNVRLLGPNSFGICRPKQGVFAWLGLTQPLSGRLALMSQSGTVASA 168 Query: 166 AVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 V + +G+G S V +G VL+ D +++I+M + G + Sbjct: 169 LVDWATWQGIGFSQVVSMGSP--VDVMPSQVLDYLSTDFDSQAILMYLQKIGRP----TR 222 Query: 226 FLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKI--NAMKEAGICIA 283 FL GR KP+ AV++ GA++++ A+ G Sbjct: 223 FLSSLRATGRSKPV-------------------AVVTEHSVGADERVLDAALSRTGAVRG 263 Query: 284 PSPARI 289 + Sbjct: 264 RRLNDL 269 >gi|323344496|ref|ZP_08084721.1| CoA ligase [Prevotella oralis ATCC 33269] gi|323094623|gb|EFZ37199.1| CoA ligase [Prevotella oralis ATCC 33269] Length = 687 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 90/264 (34%), Gaps = 30/264 (11%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE-SIEAEIP 96 ++PK + F V KE + +++ V + + + E ++ Sbjct: 42 RIVNPK------EDEIQGIKAFHDV---KELPPTDLAILVVAARFCPEYVEVLASEKDVR 92 Query: 97 LIVCITEGIPVL---DMVRVKARL---EKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + I+ G K L EK + LIGPNC G+L + P Sbjct: 93 AFIIISAGFGEETPEGGEMEKRILQTCEKYGAALIGPNCIGVLNNWYHGVFTKPIPHLSP 152 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVL----ELFLADEAT 206 +S SG + +GL ++ IG G E DVL E F AD + Sbjct: 153 SGADFISGSGATAVFILESAVIKGLQFNSVWSIGNGKQIGIE--DVLQHMDENFDADRDS 210 Query: 207 ESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKG 266 + ++ E + + K R I AG + R A + +G Sbjct: 211 KVKLLYIENIANPDRLLFHASSLIRKGCR---IAAIKAGTSESGSR----AASSHTGAIA 263 Query: 267 GAEDKINA-MKEAGICIAPSPARI 289 ++ + A ++AGI S + Sbjct: 264 SSDSAVEALFRKAGIVRCFSREEL 287 >gi|157382772|gb|ABV48823.1| ATP citrate lyase alpha subunit [enrichment culture clone BSEaclA5] Length = 316 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 33/92 (35%) Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 ++M+GE+GG E + LKD K GHAGA A Sbjct: 1 MIMLGELGGDLEYRVVEALKDGIITKPLIAWCIGTISKHFAGEVQFGHAGAKAGADMETA 60 Query: 269 EDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 + K A++ AG + S + + L Sbjct: 61 DAKNAALRAAGALVPNSFDEFPELIKGVYEDL 92 >gi|329956548|ref|ZP_08297145.1| CoA binding domain protein [Bacteroides clarus YIT 12056] gi|328524445|gb|EGF51515.1| CoA binding domain protein [Bacteroides clarus YIT 12056] Length = 687 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 87/236 (36%), Gaps = 13/236 (5%) Query: 62 VAEAKERTAANASVIYVPPSGAGDAI-IESIEAEIPLIVCITEGIPVLD------MVRVK 114 A+ K+ + +++ +P DA+ + + E + + ++ G R+ Sbjct: 57 YADVKDIPDTDLAILAIPAVLCPDAVELLASEKRVRAFIILSAGFGEETHEGALLEDRIL 116 Query: 115 ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEG 174 + + LIGPNC G++ + P V ++S SG + +G Sbjct: 117 ETANRYGASLIGPNCIGLMNTWHHSVFSQPIPNLHPQGVDLISSSGATAVFILESAVTKG 176 Query: 175 LGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRG 234 L ++ +G G E DVL+ +E + + + + + L + Sbjct: 177 LQFNSVWSVGNAKQIGVE--DVLQYMDEHFDSEKDSKIKLLYIESISDPDRLLFHASSLI 234 Query: 235 RKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 +K + + ++ G A + +G ++ + A ++AGI S + Sbjct: 235 KKGCKIAAIKSGSSESG---SRAASSHTGAIASSDSAVEALFRKAGIVRCYSREEL 287 >gi|121608773|ref|YP_996580.1| CoA-binding domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121553413|gb|ABM57562.1| CoA-binding domain protein [Verminephrobacter eiseniae EF01-2] Length = 710 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 79/233 (33%), Gaps = 22/233 (9%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR------LEKSSSRL 124 + V+ VP SG I + + V ++ G + +S RL Sbjct: 74 PDVVVVAVPASGVLAVIEDCAARGVAFAVILSSGFGEAGDQGRRQEQRLQEIAARSGLRL 133 Query: 125 IGPNCPGILTPDSCKIGIMPGSIFR----KGSVGILSRSGTLTYEAVFQTSQEGLGQSTA 180 GPNCPG+ + ++G+ F KG +G+ ++ G L + Q + G+G Sbjct: 134 YGPNCPGLTNVNQ-RLGLTFSPSFPHDLVKGPIGLATQGGGLGRNVM-QAMERGIGIGLW 191 Query: 181 VGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 G + + D + IV + E + A + KP++ Sbjct: 192 ASTGNE--VDLQVADFIHYMADAPDIRVIVSLLEGIKDGPKFVAAV---QRAAANGKPVI 246 Query: 241 GFVAGKTAPPGRTM-GHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 GK+ R H A+ G A+ ++ G+ + + Sbjct: 247 VLKVGKSEYGRRAAQSHTAALT----GSAQVNSAIFRQFGVVEVDDIDELADT 295 >gi|121997061|ref|YP_001001848.1| GCN5-like N-acetyltransferase [Halorhodospira halophila SL1] gi|121588466|gb|ABM61046.1| GCN5-related N-acetyltransferase [Halorhodospira halophila SL1] Length = 882 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 90/288 (31%), Gaps = 41/288 (14%) Query: 24 HTEQAILYC--QTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPS 81 T++ IL G + P GG VPVF + + + +VI P Sbjct: 23 DTDRRILRNLLSEPFQGPVMPVMAGIDSMGG---VPVFPGIDDLPAVP--DLAVITRPLE 77 Query: 82 GAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK--------SSSRLIGPNCPGIL 133 I E ++ T +P + LE+ R+ GP I Sbjct: 78 EVPALITALGERGTRGVII-TRAVPRDYTREQREALEQTILEASRPHLVRVAGPGSSCIS 136 Query: 134 TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 P G ++++S + A+ + G S + IG + Sbjct: 137 VPHRGLHASSLPITLAAGKAALVTKSSAMAGAALRWCRENDSGLSHIIHIG--AATDVDL 194 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRT 253 D + D ++++ E A +F+ + R KP++ + Sbjct: 195 GDSFDYLATDHRARAVIVYIERV----RRARKFMSALRRLARMKPVIILKPPQV------ 244 Query: 254 MGHAGAVISGGKGGAEDKI--NAMKEAGICIAPSPARIGRSLVELLGS 299 G+ +D + A + AG+ + ++ E+L S Sbjct: 245 ----------GEEEIDDFVYDAAFRRAGVVRVDDLEELFSAV-EILDS 281 >gi|332884710|gb|EGK04967.1| hypothetical protein HMPREF9456_00720 [Dysgonomonas mossii DSM 22836] Length = 685 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 86/257 (33%), Gaps = 24/257 (9%) Query: 50 TGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAI-IESIEAEIPLIVCITEGIPVL 108 G + +T V + A+ ++I +P + + + + + + + + G Sbjct: 48 GGIIQGIKAYTKVEDI---PQADLAIISIPANQCIETVDYLANKKGVKAFIVFSAGFSEE 104 Query: 109 DMVRVKAR------LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTL 162 + K+ + +IGPNC G + I P V I+S SG Sbjct: 105 SEEGAIREKQLIEIVNKAGAIMIGPNCSGFFNTNHQSIFTRPIPSLDTNGVDIISSSGGT 164 Query: 163 TYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF--LADEA--TESIVMVGEIGGS 218 + + GL ++A IG G E D+LE D + ++ E + Sbjct: 165 ITYIIESAMRIGLRFNSAWSIGNAAQIGIE--DILEYLDKEFDPETSPKIKLLYLEKISN 222 Query: 219 AEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKE 277 + L + + I +G + A + +G ++ + A ++ Sbjct: 223 PD---RFLLHSSSLINKGCKIAAIKSG----SSTSGSRAASSHTGAIASSDSAVEALFRK 275 Query: 278 AGICIAPSPARIGRSLV 294 AGI S + Sbjct: 276 AGIIRCYSREELANVAA 292 >gi|313676838|ref|YP_004054834.1| CoA-binding domain protein [Marivirga tractuosa DSM 4126] gi|312943536|gb|ADR22726.1| CoA-binding domain protein [Marivirga tractuosa DSM 4126] Length = 682 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 82/232 (35%), Gaps = 20/232 (8%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSS 122 + +++ +P + + +A + + G ++ + EK ++ Sbjct: 64 PKVDLAILSIPAFLCVETVETLAQAGTKGFIIYSAGFAEAGEQGVDLENQLISIAEKYNA 123 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++IGPNC GI+ + P + + ++S SG + GL S Sbjct: 124 QIIGPNCIGIINGHYKGVFTTPVPHYYEEGCELISSSGATAVFIMEAAHAVGLKFSNIYS 183 Query: 183 IGGDPVKGTEFIDVLELFLA--DEA--TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 IG G E ++LE A D + ++ E + +FLK + RK Sbjct: 184 IGNAGQTGVE--EILEHMDATFDPERSPKVKLLYLENIKNP----FKFLKHASSLVRK-- 235 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINA-MKEAGICIAPSPARI 289 +A + A + +G ++ I A K+A I S + Sbjct: 236 -GCHIAAIKSGYSEAGSRAASSHTGAIATSDTLIRALFKKAAIVYCHSREEL 286 >gi|227508400|ref|ZP_03938449.1| conserved hypothetical protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227192050|gb|EEI72117.1| conserved hypothetical protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 993 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 74/187 (39%), Gaps = 12/187 (6%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPN 128 AN +VI VP A D I +++ + V ++ + + D R+K + K ++GP+ Sbjct: 98 PDANLAVISVPGLYAADEIDNALDHNLNAFV-FSDNVSLEDESRLKKKAHKKGLLVMGPD 156 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 C + + ++ R G++G++ SGT E + G G + A+G GG + Sbjct: 157 CGTGIISNVPLAFT---NVVRSGNIGLVGASGTGIQEVTSMIERLGGGVTHAIGTGGRDL 213 Query: 189 KGT----EFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + D + + TE I ++ + + L KP+V Sbjct: 214 SDSVGAITMEDAIAGLAHHDPTEVIGIISKPPAKEVRDDVVSLLH----SIDKPVVAIFL 269 Query: 245 GKTAPPG 251 G+ Sbjct: 270 GEKPDHH 276 >gi|227356562|ref|ZP_03840949.1| protein FdrA (multicopy suppressor of dominant negative ftsH mutants) [Proteus mirabilis ATCC 29906] gi|227163318|gb|EEI48245.1| protein FdrA (multicopy suppressor of dominant negative ftsH mutants) [Proteus mirabilis ATCC 29906] Length = 555 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 77/205 (37%), Gaps = 14/205 (6%) Query: 46 STYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI 105 V + T + + AN +I + A + +E ++ ++ + Sbjct: 95 GQKSGNKLTTVRSWRTAKQ--KSPNANMLLISIAGEYAAELADTGLEDGCN-VMLFSDNV 151 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 + D +K + + ++GP+C + +I KGS+GI+ SGT E Sbjct: 152 SIADEKALKEKAAANGLIVMGPDCGTANIAGAPLA---FANIAPKGSIGIVGASGTGIQE 208 Query: 166 AVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 Q + G S A+G+GG + G I + + AD T I V + A Sbjct: 209 ITSQIVLQRQGVSHAIGLGGRDLSEQIGGISAITAINMLAADPQTRVIAFVSKPPAPA-- 266 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGK 246 + + E KR KPIV G Sbjct: 267 -VREKIIAEMKR-HNKPIVAQFLGT 289 >gi|197286048|ref|YP_002151920.1| membrane protein FdrA [Proteus mirabilis HI4320] gi|194683535|emb|CAR44382.1| protein FdrA (multicopy suppressor of dominant negative ftsH mutants) [Proteus mirabilis HI4320] Length = 555 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 77/205 (37%), Gaps = 14/205 (6%) Query: 46 STYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGI 105 V + T + + AN +I + A + +E ++ ++ + Sbjct: 95 GQKSGNKLTTVRSWRTAKQ--KSPNANMLLISIAGEYAAELADTGLEDGCN-VMLFSDNV 151 Query: 106 PVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYE 165 + D +K + + ++GP+C + +I KGS+GI+ SGT E Sbjct: 152 SIADEKALKEKAAANGLIVMGPDCGTANIAGAPLA---FANIAPKGSIGIVGASGTGIQE 208 Query: 166 AVFQTSQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEE 221 Q + G S A+G+GG + G I + + AD T I V + A Sbjct: 209 ITSQIVLQRQGVSHAIGLGGRDLSEQIGGISAITAINMLAADPQTRVIAFVSKPPAPA-- 266 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGK 246 + + E KR KPIV G Sbjct: 267 -VREKIIAEMKR-HNKPIVAQFLGT 289 >gi|70937520|ref|XP_739556.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56516643|emb|CAH79470.1| hypothetical protein PC000316.03.0 [Plasmodium chabaudi chabaudi] Length = 79 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 44/63 (69%) Query: 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 I F+AG+ APPG+ MGHAGA+ISGGKG A+ KI A++ AG+ + +P +IG + ++ Sbjct: 16 NIFAFIAGRCAPPGKRMGHAGALISGGKGTADGKIEALRNAGVHVVINPTKIGEEIYSVM 75 Query: 298 GSL 300 + Sbjct: 76 KDI 78 >gi|291008960|ref|ZP_06566933.1| 6-carboxyhexanoate-CoA ligase [Saccharopolyspora erythraea NRRL 2338] Length = 634 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 89/262 (33%), Gaps = 28/262 (10%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P++G V + +++ + + A D + E+ +P++ Sbjct: 60 FVNPRRG------TVQGVKAYPSLSALPAVP--DHVYVMTGADAAVDTVAEAARLGVPVV 111 Query: 99 VCITEGIPVL------DMVRVKARLEKSSSRLIGPNCPGILTPDSCK----IGIMPGSIF 148 ++ G R++A + +R++GP+ G++ P + Sbjct: 112 TVLSSGFAEEGAEGKAREDRLRAAAAQGPTRVVGPSSLGVVNPRNGVMLTGNAAFGEPDT 171 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 G + + S+SG++ V + G+G + V GG+ ++ L D S Sbjct: 172 PTGGIFVASQSGSVIGAMVSRARGRGIGFAGLVSTGGEA--DLSLGEICSATLDDPEITS 229 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGG 267 + E A + A A KP+ + G++ T+ H GA+ Sbjct: 230 YALFLESLRHAGDLADFA---AAAHRAGKPVAVYKLGRSDEAAALTVSHTGALAGEDSEA 286 Query: 268 AEDKINAMKEAGICIAPSPARI 289 + G + + Sbjct: 287 E----AFFRACGFVRVATFEGL 304 >gi|91977778|ref|YP_570437.1| CoA-binding [Rhodopseudomonas palustris BisB5] gi|91684234|gb|ABE40536.1| CoA-binding [Rhodopseudomonas palustris BisB5] Length = 697 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 95/263 (36%), Gaps = 30/263 (11%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P S G+ + + ++A+ E ++ V A A+ + A + Sbjct: 38 FKGKVYPINPSRPEIQGHKS---YASLADLPEAPE--MVIVAVAGDNAIAAVEDCAAAGV 92 Query: 96 PLIVCITEGIPVLDMVRVKAR-------LEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF 148 + V + G +D V KA+ K+ R++GPN G+ + I Sbjct: 93 KIAVVMASGFGEVDAVEGKAKERRMVAAAHKAGMRIVGPNSQGLANFGTGAIASFSTMFM 152 Query: 149 ----RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADE 204 +G V +LS+SG L+ V Q+G+G G D ++ D Sbjct: 153 DMDRAEGHVAMLSQSGALSTVPVGFLRQKGIGVRHTHATGNDA--DITVGELACAVAEDP 210 Query: 205 ATESIVMVGE--IGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 +++ E EE A D R PI+ +G+T A + Sbjct: 211 EVRLMLLYLESIPDKKYLEELASIALD-----RDLPIIALKSGRTEAGK----QAAQSHT 261 Query: 263 GGKGGAEDKINA-MKEAGICIAP 284 G + ++A + GI AP Sbjct: 262 GALANEDRVVDAFFEHHGIWRAP 284 >gi|157148464|ref|YP_001455783.1| membrane protein FdrA [Citrobacter koseri ATCC BAA-895] gi|157085669|gb|ABV15347.1| hypothetical protein CKO_04290 [Citrobacter koseri ATCC BAA-895] Length = 553 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 12/194 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++ V A E + A ++ ++ +P+ V +K + Sbjct: 110 SACQKLPQANLLLVSVAGEYAASVAREGLLAN-KNVMLFSDNVPLEQEVELKTMARERGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + S ++ +G +G++ SGT E Q + G S A+G Sbjct: 169 IVMGPDCGTAMIAGSPLA---FANVLPEGGIGVIGASGTGIQEVTSQIALHQQGISHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + L++ AD+AT I V + + + G KP Sbjct: 226 LGGRDLSAEVGGISALTALDMLAADDATRVIAFVSKPPSPQVRT--RIIAAMQNVG--KP 281 Query: 239 IVGFVAGKTAPPGR 252 +V G+ R Sbjct: 282 VVALFLGRQPEQRR 295 >gi|153805770|ref|ZP_01958438.1| hypothetical protein BACCAC_00006 [Bacteroides caccae ATCC 43185] gi|149130447|gb|EDM21653.1| hypothetical protein BACCAC_00006 [Bacteroides caccae ATCC 43185] Length = 686 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 91/262 (34%), Gaps = 26/262 (9%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE-SIEAEIP 96 ++PK VP F V + + +V+ VP + D + + + Sbjct: 42 RAVNPK------EKEVQGVPAFADVKDL---PDTDLAVLAVPAALCPDIVETLAGTKQTR 92 Query: 97 LIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + ++ G R+ + K + LIGPNC G++ + P Sbjct: 93 AFIILSAGFGEETHEGALLEERILETVNKYGASLIGPNCIGLMNTWHHSVFSQPIPNLNL 152 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA--DEATES 208 V ++S SG + +GL ++ +G G E DVL+ D +S Sbjct: 153 KGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQFMDENFDPEKDS 210 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 + + I + + L + RK +A A + A + +G + Sbjct: 211 HLKLLYIES--IQNPDRLLFHASSLIRK---GCKIAAIKAGSSESGSRAASSHTGAIASS 265 Query: 269 EDKINA-MKEAGICIAPSPARI 289 + + A ++AGI S + Sbjct: 266 DSAVEALFRKAGIVRCFSREEL 287 >gi|332098521|gb|EGJ03487.1| protein fdrA domain protein [Shigella boydii 3594-74] Length = 264 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 76/159 (47%), Gaps = 8/159 (5%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ + AN ++I V A + +++E + ++ ++ + + D +++K R + Sbjct: 110 SACQKLSDANLALISVAGEYAAELANQALERNLN-VMMFSDNVTLEDEIQLKTRAREKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + + ++ +G++G++ SGT E Q +Q G G + A+G Sbjct: 169 LVMGPDCGTSMIAGTPLA---FANVMPEGNIGVIGASGTGIQELCSQIAQAGEGITHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGG 217 +G V G + LE+ ADE +E + V + Sbjct: 226 LGERDLSREVGGISALTALEMLSADEKSEVLAFVSKPPA 264 >gi|160897328|ref|YP_001562910.1| CoA-binding domain-containing protein [Delftia acidovorans SPH-1] gi|160362912|gb|ABX34525.1| CoA-binding domain protein [Delftia acidovorans SPH-1] Length = 708 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 94/272 (34%), Gaps = 22/272 (8%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G I+P G P + E + + P + + E + Sbjct: 58 FAGTIYPINPHRSQVQGEPAWPSLAALPEVPDHV-----FVLSPTGTVLETVRECARLGV 112 Query: 96 PLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCK----IGIMPG 145 ++ + G +++ + R++GP+ G++ P + Sbjct: 113 GVVTILASGFSESGPQGAQREQQLRQIARSTGLRILGPSSLGVVHPRNGLVLTANAAFAE 172 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 G V + S SG++ V + G+G + V +G + ++ L D Sbjct: 173 PDVPSGKVFVASHSGSMIGALVSRGKARGVGFAGLVSVGSE--VDLSVGEICAATLDDPG 230 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK-TAPPGRTMGHAGAVISGG 264 E V+ E + A F ++ A RG KP++ + G+ +A H GA+ +G Sbjct: 231 IEGYVLFLESLRHGDALQA-FAREAALRG--KPVIAYKLGRSSAAAEMAATHTGAL-AGE 286 Query: 265 KGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 A+ + + A + + + + +L Sbjct: 287 DDIADAFLKGLGVARVDMLETLFEVFPLARKL 318 >gi|254462357|ref|ZP_05075773.1| CoA-binding [Rhodobacterales bacterium HTCC2083] gi|206678946|gb|EDZ43433.1| CoA-binding [Rhodobacteraceae bacterium HTCC2083] Length = 696 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 103/282 (36%), Gaps = 24/282 (8%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 G+ +A + ++PK+ VP ++A+ + +A + Sbjct: 23 GRDALIAVREARRRGFDGQMWAVNPKRA------DLDGVPCVPSIADLPQVP--DAVYLA 74 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARL--EKSSSRLIGPNCPGIL-T 134 +P G A+ E + +VC + G + L LIGPNC G++ Sbjct: 75 IPADGIVAALSELAAIGVGGVVCFSAGFKETGDAAAEQALIEAAGDMALIGPNCYGLINY 134 Query: 135 PDSCKIGIMPGSIFRKG-SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEF 193 D+ + + G I+++SG + + S L + V G V G E Sbjct: 135 IDNVALWSFEHGGWSPGYGAAIITQSGMFSSDIT--MSARSLPLAYMVSAGNQAVLGLE- 191 Query: 194 IDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR- 252 D L++F D + +I + I G + +A + R +V G +A Sbjct: 192 -DFLDVFADDASVRAIGL--HIEGLQDIQAFER-AALKAIERGIAVVALKTGSSAIGAAL 247 Query: 253 TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 T+ H G++ G E +G+ SPA+ +L Sbjct: 248 TVSHTGSL----SGSDELYEALFARSGVISVTSPAQFIETLK 285 >gi|284988796|ref|YP_003407350.1| FdrA family protein [Geodermatophilus obscurus DSM 43160] gi|284062041|gb|ADB72979.1| FdrA family protein [Geodermatophilus obscurus DSM 43160] Length = 490 Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 48/223 (21%), Positives = 89/223 (39%), Gaps = 28/223 (12%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC 129 +V+ VP A ++I A ++ ++G+PV V +K + ++G +C Sbjct: 119 GPALAVVSVPGQYAVAEAADAIAAG-RSVLVFSDGVPVEHEVALKRAAHDAGVLVMGSDC 177 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP-- 187 + + + ++ R+G VG+++ SGT + G+G S +G+GG Sbjct: 178 GTAIVSG---LALGFANVVRRGPVGLVAASGTGAQQVSCLLDTAGVGVSHVLGVGGRDLS 234 Query: 188 --VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 V G +D L LF AD ATE +++V + A A EA P+ Sbjct: 235 EAVGGLATLDALALFDADPATERVLLVSKPPAPAVAVAV----AEAAAELSVPV------ 284 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPAR 288 H A+ + +++ G+ + P+R Sbjct: 285 ----------HPAALSAESPDLTAAVEALLRDMGVAVPEWPSR 317 >gi|238024091|ref|YP_002908323.1| CoA-binding protein [Burkholderia glumae BGR1] gi|237878756|gb|ACR31088.1| CoA-binding protein [Burkholderia glumae BGR1] Length = 719 Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 96/269 (35%), Gaps = 31/269 (11%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK+ P ++A+ + + +V+ +P + DA+ + ++ + Sbjct: 57 LVNPKR------DEINGRPCVNSIAQLPD--GVDVAVLAIPQAAVLDAVRQLAARKVGAV 108 Query: 99 VCITEGIPVL------DMVRVKARLEKSSSRLIGPNCPGILT---------PDSCKIGIM 143 V + G + ++ + GPNC G + ++ Sbjct: 109 VIFSAGFAEAGAEGIAQQQEIARIAAETGMLVEGPNCLGCINYLERVPLTFIETAVSAEQ 168 Query: 144 PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLAD 203 + ++GILS+SG + + GL S AV G + E D L+ L D Sbjct: 169 ASRNRSQPAIGILSQSGAMMAVLNTTLASRGLPLSYAVSTGNEAASHLE--DYLQFLLDD 226 Query: 204 EATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISG 263 T I M+ E + A+R K ++ A H GA+ +G Sbjct: 227 AGTRVIAMIAEQFRQPARLL--EIARHARRAGKLLVLLHPGRSAAARASAATHTGAM-AG 283 Query: 264 GKGGAEDKINAMKEAGICIAPSPARIGRS 292 K+ + AG+ IAP+ +G Sbjct: 284 DHSLMRTKV---ERAGVVIAPTLEELGDI 309 >gi|257868659|ref|ZP_05648312.1| membrane protein FdrA [Enterococcus gallinarum EG2] gi|257802823|gb|EEV31645.1| membrane protein FdrA [Enterococcus gallinarum EG2] Length = 1002 Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 79/215 (36%), Gaps = 15/215 (6%) Query: 51 GGNVNVPVFTTVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD 109 G + P + EA AN ++ +P + ++++ + + T+ + + D Sbjct: 94 GDDKEKPAAASWQEALAALPDANVALFSIPGEYGAAEMEKALKNGLH-VFSFTDNVAIED 152 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQ 169 VR+K + ++GP+C + I I ++ G++G++ SGT E Sbjct: 153 EVRLKKLAHEKGLLMMGPDCGTGIISS---IPIAFTNVVSPGNIGVVGASGTGIQEVTTI 209 Query: 170 TSQEGLGQSTAVGIGGDPVKG----TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQ 225 + G G A+G GG + D + E T+ I ++ + + Sbjct: 210 IDRLGGGVVHAIGTGGRDLSDKVGAITVKDAIVALENHEPTDVICVISKPPAKEVRDEVV 269 Query: 226 FLKDEAKRGRKKPIVGFVAG--KTAPPGRTMGHAG 258 L + KP+V G A G+ Sbjct: 270 QL----LQSISKPVVAIFLGEKPEAHEGKVYLAHT 300 >gi|209886463|ref|YP_002290320.1| acyl-CoA synthetase [Oligotropha carboxidovorans OM5] gi|209874659|gb|ACI94455.1| acyl-CoA synthetase [Oligotropha carboxidovorans OM5] Length = 457 Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 94/269 (34%), Gaps = 27/269 (10%) Query: 43 KKGSTY----WTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 KG Y + + ++A+ E + I +P +I++ +EA+ Sbjct: 38 FKGGLYPINPKATEILGCKAYPSLADVPE--PVDLVYIVLPSQHMESSIVQCVEAKAKAA 95 Query: 99 VCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG-SIFRKG 151 IT G +++ K + GPN G++ D +G + +G Sbjct: 96 CIITAGFAEAGPEGIALQDKIREIGRKGGLLMAGPNTIGMVNTDVRMMGSFVNFPRWEEG 155 Query: 152 SVGILSRSGTLTYEAVFQTSQEGL---GQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 + + +++G T + Q + S ++ +G + +D L DE T+ Sbjct: 156 GISLFTQTGIFTGAVMRQIMDSDVQRPPISKSIDVGNK--IDVDELDFLHFAEKDEGTKV 213 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 I E AA+ + R KP+V G+TA A A +G Sbjct: 214 IGFYIESIRDLPGFAAKV----KEISRTKPVVMLKPGRTAFGKM----ASACHTGSPPSD 265 Query: 269 E-DKINAMKEAGICIAPSPARIGRSLVEL 296 + + A+K +GI L L Sbjct: 266 DTEVTAALKGSGILRVDDEEEFVNVLRAL 294 >gi|148259164|ref|YP_001233291.1| GCN5-related N-acetyltransferase [Acidiphilium cryptum JF-5] gi|146400845|gb|ABQ29372.1| GCN5-related N-acetyltransferase [Acidiphilium cryptum JF-5] Length = 852 Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 77/219 (35%), Gaps = 24/219 (10%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + ++I PP I + A + + ++ + R++GP Sbjct: 59 VDLALIADPPEAVPGVI--AGLAG----RLRGAAVVYAAVDGLREAALAARVRVVGPRSF 112 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 GI P + + G V +L +S L + + G+G S VGIGG+ G Sbjct: 113 GIAAPGARLNALRSHIPPPPGRVALLGQSPALARAVIDWAAPNGIGFSHVVGIGGNADIG 172 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 F VL+ D T I+M + + FL R +PIV V P Sbjct: 173 --FGRVLDHLSRDPGTGPILMEI----AGLRDPRLFLSAARAAARLRPIVAIV------P 220 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G +G + G A++ AG+ + S Sbjct: 221 GARLGDPSGIALAGFE------AALRRAGVMLTTSLGEF 253 >gi|27376086|ref|NP_767615.1| acetyl-CoA synthetase [Bradyrhizobium japonicum USDA 110] gi|27349225|dbj|BAC46240.1| bll0975 [Bradyrhizobium japonicum USDA 110] Length = 739 Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 100/294 (34%), Gaps = 29/294 (9%) Query: 11 VLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA 70 VLV G T K G + + GG++P VP + A E+ Sbjct: 38 VLV-GATDKPGNYAERIWNNLVKYGFEGGLYPVNAKRE---TIWGVPCYKDFAALPEKP- 92 Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD-------MVRVKARLEKSSSR 123 + ++ VP A I ++ A +T G L ++A + ++ Sbjct: 93 -DHVLVLVPARFAVQVIRDAAAAGARSATIVTSGFSELQDDESQQLAAELQAAIRETGLA 151 Query: 124 LIGPNCPGILTPDSCKIGIMPGS--IFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 + GPNC G L+ + +G+V I +SG + G+G V Sbjct: 152 VTGPNCLGNLSAGEKLFTNIDDRIVTMEQGAVAIAGQSGAIVMAIRQALEDRGVGVGYMV 211 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGS--AEEEAAQFLKDEAKRGRKKPI 239 G + G E D++ F D + + IV+ E + A +A + + KP+ Sbjct: 212 TTGNEA--GLETPDLMRYFAEDPSVKVIVVYLEGVRNTKAFRDACKAARAA-----SKPV 264 Query: 240 VGFVAGKTAPP-GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 + G + M H GA+ G E G+ + + Sbjct: 265 IALKLGASEGGRAAAMAHTGALA----GSIETFDAIATREGVIRVGGLDELIET 314 >gi|296129540|ref|YP_003636790.1| GCN5-related N-acetyltransferase [Cellulomonas flavigena DSM 20109] gi|296021355|gb|ADG74591.1| GCN5-related N-acetyltransferase [Cellulomonas flavigena DSM 20109] Length = 926 Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 82/228 (35%), Gaps = 18/228 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKAR------LEKSSSR 123 +V+ + D + +V ++ G + + + R Sbjct: 291 PVELAVVAQSATRVLDTTRRLGALGVRGLVLVSGGFAEAGPEGLARQRLLLGVAHGAGMR 350 Query: 124 LIGPNCPGIL--TPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 ++GP+ G++ + + + R G VG+ +S + + GLG + V Sbjct: 351 VVGPSSYGLVATHDGTTLDASLAETPPRPGRVGLFCQSAPFAVTLLAAVERRGLGLAQLV 410 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G D+++ + D+ TE + + E G+ +F + + KP+V Sbjct: 411 SAGHRA--DVSGNDLMQFWGEDDDTEVVALYLESIGNP----RKFSRVARRLASHKPVVV 464 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 AG++ GHA + ++ M+++G+ + ++ Sbjct: 465 LTAGRS-GHVVPPGHAVRPTRAPRRTLDEV---MRQSGVIRVENVHQM 508 >gi|326402317|ref|YP_004282398.1| putative acetyltransferase [Acidiphilium multivorum AIU301] gi|325049178|dbj|BAJ79516.1| putative acetyltransferase [Acidiphilium multivorum AIU301] Length = 852 Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 77/219 (35%), Gaps = 24/219 (10%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCP 130 + ++I PP I + A + + ++ + R++GP Sbjct: 59 VDLALIADPPEAVPGVI--AGLAG----RLRGAAVVYAAVDGLREAALAARVRVVGPRSF 112 Query: 131 GILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKG 190 GI P + + G V +L +S L + + G+G S VGIGG+ G Sbjct: 113 GIAAPGARLNALRSHIPPPPGRVALLGQSPALARAVIDWAAPNGIGFSHVVGIGGNADIG 172 Query: 191 TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPP 250 F VL+ D T I+M + + FL R +PIV V P Sbjct: 173 --FGRVLDHLSRDPGTGPILMEI----AGLRDPRLFLSAARAAARLRPIVAIV------P 220 Query: 251 GRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 G +G + G A++ AG+ + S Sbjct: 221 GARLGDPSGIALAGFE------AALRRAGVMLTTSLGEF 253 >gi|116694357|ref|YP_728568.1| Acyl-CoA synthetase [Ralstonia eutropha H16] gi|113528856|emb|CAJ95203.1| Acyl-CoA synthetase [Ralstonia eutropha H16] Length = 701 Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 93/271 (34%), Gaps = 23/271 (8%) Query: 34 TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEA 93 T G I P + G P TVA+ E VP I + E Sbjct: 39 TGYAGRIMPVNPNRREVQGLEAWP---TVADLPEVPDVAVV--AVPAEQVRGVIEQLAER 93 Query: 94 EIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI 147 +P+ + + G + A + +RL+GPN G + + +G Sbjct: 94 RVPVAILFSAGFAEVGGAGVAMQDELVAIARRGGTRLLGPNSLGCVNLHTGFVGSFTTLA 153 Query: 148 FR----KGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLAD 203 G+V ++S+SG V G+G S V G + DV+ L + D Sbjct: 154 RLDGVFPGNVAVISQSGAYGSHLVSSLVDAGVGLSGVVMTGNEA--DVSLADVVRLMVDD 211 Query: 204 EATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISG 263 T I + E + A +A R +KP+V G++ A I+G Sbjct: 212 PNTGVIALYSEGIHDGDGLADAL---KAARAARKPVVMMKVGRSEVGSAAAQSHTASIAG 268 Query: 264 GKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 + ++E G+ A + ++ + Sbjct: 269 NDAVVDAV---LEELGVVRANTTEQMLDIVR 296 >gi|73541596|ref|YP_296116.1| CoA-binding [Ralstonia eutropha JMP134] gi|72119009|gb|AAZ61272.1| CoA-binding [Ralstonia eutropha JMP134] Length = 699 Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 78/272 (28%), Gaps = 28/272 (10%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G + P G P + E A+VI V + + +A + Sbjct: 39 YAGEVFPVNPGRTTIQGYRAYPTLHDIGRTPE-----AAVIAVSGDATLEQVRLCADAGV 93 Query: 96 PLIVCITEGIPVLDMVRVKA------RLEKSSSRLIGPNCPGI--LTPDSCKIGIMPGSI 147 V + G + RL+GPN G + Sbjct: 94 KAAVIMASGFAETGEAGRRRQQQLVDAANAGGMRLVGPNAQGTANFASGAVLNFSTMFME 153 Query: 148 FRK--GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 G + I+S+SG + Q GLG V G D + + AD Sbjct: 154 VTPQDGPIAIISQSGAASVMPYALLRQAGLGVRYLVATGNDA--DLDACAMTAAVAADPE 211 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK 265 I++ E A ++ IV AG + R A A +G Sbjct: 212 IRLILVYLESITDPAALARAAALARSRGA---SIVAVKAGSSQHGAR----AAASHTGAL 264 Query: 266 GGAEDKINAM-KEAGICIAPSPARIGRSLVEL 296 G + I+A GI A IG + + Sbjct: 265 VGNDAAIDAFLARHGIWRAR---DIGELVRAV 293 >gi|209519442|ref|ZP_03268238.1| CoA-binding domain protein [Burkholderia sp. H160] gi|209500109|gb|EEA00169.1| CoA-binding domain protein [Burkholderia sp. H160] Length = 707 Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 94/269 (34%), Gaps = 31/269 (11%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++PK+ P ++ + + + +V+ +P DA+ + ++ + Sbjct: 47 LVNPKR------DEINGRPCVNSIEQLPD--GVDVAVLAIPQVAVLDAVRQLASRKVGAV 98 Query: 99 VCITEGIPVLDMVRVKAR------LEKSSSRLIGPNCPGILT---------PDSCKIGIM 143 V + G + + ++ + GPNC G + ++ Sbjct: 99 VIFSAGFAEAGAEGIAQQQEIATIAAEAGMLVEGPNCLGCINYLERVPLTFIETNVAAQE 158 Query: 144 PGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLAD 203 + ++GILS+SG + + GL S AV G + E D L+ L D Sbjct: 159 ASRNRSQPAIGILSQSGAMMAVLNTTLASRGLPLSYAVSTGNEAASHLE--DYLQFLLDD 216 Query: 204 EATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISG 263 T I M+ E + +A+R K ++ A H GA+ Sbjct: 217 PGTRVIAMIAEQFRQPGRLL--EIARDARRAGKLLVLLHPGRSAAARASAATHTGAMA-- 272 Query: 264 GKGGAEDKINAMKEAGICIAPSPARIGRS 292 G + ++ AG+ IA + +G Sbjct: 273 --GDHALMLTKVERAGVVIAQTLEELGDI 299 >gi|229820421|ref|YP_002881947.1| GCN5-related protein N-acetyltransferase [Beutenbergia cavernae DSM 12333] gi|229566334|gb|ACQ80185.1| GCN5-related protein N-acetyltransferase [Beutenbergia cavernae DSM 12333] Length = 907 Score = 70.4 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 86/240 (35%), Gaps = 21/240 (8%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD--------MVRVKARLEKSS 121 A+ +V+ +PP+ D + +V +++G D + A Sbjct: 268 GADLAVVALPPAAVVDLLGRLTPLGTHGVVVLSDGFGTGDPTRPADVTQADLVAAARTRG 327 Query: 122 SRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 R++GP GIL + R G VG+ +SG LG ST Sbjct: 328 VRVVGPRSYGILAQGEAGRMNATLWPRAARVGDVGLFCQSGAAAAALAASVEGRRLGLST 387 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 + G D ++ + +DE T+ + E G+ +F + + + P+ Sbjct: 388 FLSAGHRA--DVSGNDAMQFWQSDERTKVAALYLESFGNP----RKFSRVARRLSAQTPV 441 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGS 299 V V+G+ GH A + E +++AG+ A + + + +L + Sbjct: 442 VALVSGQR-GQVVAPGHLVATTGAPRRTTE---EMLRQAGVLAAQTTHELLD-MATVLSA 496 >gi|116619397|ref|YP_821553.1| CoA-binding domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116222559|gb|ABJ81268.1| CoA-binding domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 703 Score = 70.4 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 88/230 (38%), Gaps = 18/230 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSR 123 + +V+ +P +G +A+ + + + G + +++ +S Sbjct: 75 GVDCAVLAIPRAGVLNALEGCARRGVGAAIVFSAGYAESGEAGRAEQDQIREIARRSGMV 134 Query: 124 LIGPNCPGILTP-DSCKIGIMPGSIFRKGS---VGILSRSGTLTYEAVFQTSQEGLGQST 179 + GPNC G++ D + + + + + ++S+SG L + GL S Sbjct: 135 VEGPNCLGMVNAIDGTPLTFVASNPAKPRPGRTLALISQSGALAAVLGVSLRERGLDISF 194 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 ++ G + V G E D LE + D AT I +V E L + A+ K+ Sbjct: 195 SISSGNEAVAGVE--DFLEYLIEDPATMVITLVVEQFRDPMRFLD--LAERARTCGKRLA 250 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + +A H GA+ G + +++AG+ + + + Sbjct: 251 LLHPGSSSAARASAATHTGAMA----GDYQVMRTKVRQAGVLMVSTLEEL 296 >gi|302527693|ref|ZP_07280035.1| acetyl coenzyme A synthetase [Streptomyces sp. AA4] gi|302436588|gb|EFL08404.1| acetyl coenzyme A synthetase [Streptomyces sp. AA4] Length = 711 Score = 70.4 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 93/252 (36%), Gaps = 19/252 (7%) Query: 52 GNVNVPVFTTVAEAKE-RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM 110 G +++P TV E + V+ P + ++ + ++ G Sbjct: 87 GPLDLPGVRTVGSLAEIGYGPDLVVLATPAETVPALVRQARDLGSGAVIVFASGFAEGGN 146 Query: 111 VRVKARLEKSSSRL--IGPNCPGILTPDS----CKIGIMPGSIFRKGSVGILSRSGTLTY 164 ++ L +++ L +GPNC G+++ + + G + I+++SG + + Sbjct: 147 AVLEDELREAAGDLPVLGPNCLGVVSHPAGVQLSTTVFLDRDRVPPGPIAIVTQSGAMGF 206 Query: 165 EAVFQTSQEGLGQSTAVGIGGDPVKGTEFI--DVLELFLADEATESIVMVGEIGGSAEEE 222 Q G+G S +G + + I D+LE + V+V + G + + Sbjct: 207 VLADLLEQAGIGYSYYASVGNEACLSSHEIGSDLLE------QPDVEVLVLYLEGVRDAD 260 Query: 223 AAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 + L +A+ K + V A + H AV A ++ GI + Sbjct: 261 GLRALGRQARAAGKTVVALAVGSSAAGRQAALSHTAAVAGDHFLLASL----CRQEGIHL 316 Query: 283 APSPARIGRSLV 294 ++ +++ Sbjct: 317 VTDDDQLVDAVL 328 >gi|301020347|ref|ZP_07184454.1| membrane protein FdrA [Escherichia coli MS 69-1] gi|300398792|gb|EFJ82330.1| membrane protein FdrA [Escherichia coli MS 69-1] Length = 555 Score = 70.4 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 18/197 (9%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ A+ ++I V A + ++++ + ++ ++ + + D +++K R Sbjct: 110 SACQKLPDASLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRARDKGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMP---GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GP+C + I P ++ +G++G++ SGT E Q + G + Sbjct: 169 LVMGPDC------GTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAEEGITH 222 Query: 180 AVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGR 235 A+G+GG V G + LE+ AD +E + V + EA + A + Sbjct: 223 AIGLGGRDLSREVGGISALTALEMLSADAKSEVLAFVSKPPA----EAVRLKIVNAMKAT 278 Query: 236 KKPIVGFVAGKTAPPGR 252 KP V G T R Sbjct: 279 GKPTVALFLGYTPAVAR 295 >gi|260654365|ref|ZP_05859855.1| CoA-binding protein [Jonquetella anthropi E3_33 E1] gi|260630998|gb|EEX49192.1| CoA-binding protein [Jonquetella anthropi E3_33 E1] Length = 704 Score = 70.4 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 79/233 (33%), Gaps = 18/233 (7%) Query: 59 FTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMV----RV 113 + + A+ +VI V + + I IP V + G ++ Sbjct: 59 YQCYKNLADIPGSADVAVISVKANIVPSVLETCIAKGIPNAVIYSSGFAETGNKKLQEQI 118 Query: 114 KARLEKSSSRLIGPNCPGILT-----PDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVF 168 + R++GPNC G+L P + ++ + G V +S+SG + + Sbjct: 119 LSIARSGKIRILGPNCQGLLNLAEKTPLTFTGALLDVDPPKAGHVAFVSQSGAFGFSSFG 178 Query: 169 QTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLK 228 G+ V G + ++ + D ++M E G + Q +K Sbjct: 179 VGLDHGVNYRYVVTTGNQA--DVDAVECASYVICDPQVRLLMMYLEGIGDGQ-RFLQMVK 235 Query: 229 DEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGIC 281 D + R + AG++ + A ++G + + + GI Sbjct: 236 DARE--RNIAVAVLKAGRSPISQKAAQSHTAALTGDEAVWD---AIFDQYGII 283 >gi|262038573|ref|ZP_06011942.1| protein FdrA [Leptotrichia goodfellowii F0264] gi|261747442|gb|EEY34912.1| protein FdrA [Leptotrichia goodfellowii F0264] Length = 999 Score = 70.4 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 14/200 (7%) Query: 51 GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM 110 G +V + V E N ++I VP A I +I+ + V ++ +P + Sbjct: 97 GVQQSVKNWQQVKEVMS--DVNMALISVPGIYAALEIENAIDNGLHAFV-FSDNVPKDEE 153 Query: 111 VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQT 170 VR+K + + ++GP+C + + ++ R G++GI+ SGT E Sbjct: 154 VRLKKKAHEKGLLVMGPDCGTGIVSNVPLAFT---NVVRSGNIGIVGASGTGIQEVSTII 210 Query: 171 SQEGLGQSTAVGIGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQF 226 + G G A+G GG V D L E T+ IV+V + ++ Sbjct: 211 EKLGGGVIHAIGTGGRDLSTEVGAITTKDALTGLAHHETTDVIVVVSKPPAKEVKDDVVK 270 Query: 227 LKDEAKRGRKKPIVGFVAGK 246 L KP+V G+ Sbjct: 271 LLH----SLGKPVVAIFLGE 286 >gi|163854354|ref|YP_001628652.1| Acyl-CoA synthetase [Bordetella petrii DSM 12804] gi|163258082|emb|CAP40381.1| Acyl-CoA synthetase [Bordetella petrii] Length = 704 Score = 70.4 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 84/265 (31%), Gaps = 25/265 (9%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P G P + A + +++ V A A+ E + Sbjct: 45 YAGTLYPINPQRAEVQGQRAWPTLDALPAA-----PDLAIVAVAGEQAVQAVDRCAELGV 99 Query: 96 PLIVCITEGIPVLDMVRVK------ARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSI-- 147 + I+ G AR + R++GPN G+ + I Sbjct: 100 AAAIVISAGFAETGDAGRALQDAMMARARAAGMRIVGPNSQGLANFGNGAIASFSTMFLE 159 Query: 148 --FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 G V +LS+SG + Q GLG G + ++ L D Sbjct: 160 VAPADGPVAVLSQSGGMGAMVYGLLRQRGLGVRHVHATGNEA--DVTVAELACAVLRDPE 217 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGK 265 +++ E S ++ A R P++ +G++ R A A +G Sbjct: 218 VRIVLLYLE---SLQDAGALAEAAAMASARGVPLIAVKSGRSEAGAR----AAASHTGAM 270 Query: 266 GGAEDKINA-MKEAGICIAPSPARI 289 + ++A + I A P + Sbjct: 271 ASEDRAVDAYFERHAILRARDPQEL 295 >gi|194291518|ref|YP_002007425.1| acetyl CoA synthetase; CoA-binding domain; succinyl-CoA synthetase domain [Cupriavidus taiwanensis LMG 19424] gi|193225422|emb|CAQ71368.1| putative acetyl CoA synthetase; CoA-binding domain; Succinyl-CoA synthetase domain [Cupriavidus taiwanensis LMG 19424] Length = 728 Score = 70.4 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 78/233 (33%), Gaps = 18/233 (7%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK------SSSR 123 A+ +++ VP + DA+ + VC T G + + E Sbjct: 67 PADLAIVAVPVGASLDAMRQLARNGTRAAVCFTSGFAETGGNGIALQAELAALAQAHGIT 126 Query: 124 LIGPNCPGILTPDSCKIGIMP----GSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 L+GPNC G + + G VG++S+SG A + LG S Sbjct: 127 LLGPNCLGAMNLRERVFATFSPIPLSGLPPVGDVGLVSQSGAFGAYAFALAREAALGLSH 186 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V G + G DV+E D+AT I+ E A KP+ Sbjct: 187 WVTTGNEA--GLHVADVIEWLARDDATRVILAYLEGCRDGARLRRALAAARAAG---KPV 241 Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRS 292 V G T R+ A ++G + + E G+ A + R Sbjct: 242 VVTKVGTTEAGARSAQSHTASLAGEDAVYQAVFD---EYGVFRADTLDDFFRL 291 >gi|255525508|ref|ZP_05392444.1| FdrA family protein [Clostridium carboxidivorans P7] gi|255510776|gb|EET87080.1| FdrA family protein [Clostridium carboxidivorans P7] Length = 590 Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 81/201 (40%), Gaps = 13/201 (6%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC 129 AN +VI +P A +++ + + ++ + + D ++K + K ++GP+C Sbjct: 114 DANLAVISIPGIYAALEADRALDENLN-VFMFSDNVTLEDEKKLKEKAHKKGLLVMGPDC 172 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP-- 187 + I + + G +GI+ SGT E + G G + A+G GG Sbjct: 173 GTGIIKG---IPVAFTNHVTPGKIGIVGASGTGIQEITTIIDRLGEGVTNAIGTGGRDLS 229 Query: 188 --VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 + +D + D+ T+ ++++ + AE+ +K R KKP+V G Sbjct: 230 EHIGAITMMDSINAMEEDKDTDVVIVISKP--PAEKVRNNVMK--RLRNFKKPVVTLFLG 285 Query: 246 KTAP-PGRTMGHAGAVISGGK 265 + HA + + Sbjct: 286 EKPEFHEENFYHAYTLDEAAR 306 >gi|157382766|gb|ABV48820.1| ATP citrate lyase alpha subunit [enrichment culture clone BSEaclA2] Length = 307 Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 32/91 (35%) Query: 210 VMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAE 269 +++GE+GG E + LKD K GHAGA A+ Sbjct: 3 LVLGELGGDLEYRVVEALKDGIITKPLIAWCIGTISKHFAGEVQFGHAGAKAGADMETAD 62 Query: 270 DKINAMKEAGICIAPSPARIGRSLVELLGSL 300 K A++ AG + S + + L Sbjct: 63 AKNAALRAAGALVPNSFDEFPELIKGVYEDL 93 >gi|134101562|ref|YP_001107223.1| 6-carboxyhexanoate-CoA ligase [Saccharopolyspora erythraea NRRL 2338] gi|133914185|emb|CAM04298.1| 6-carboxyhexanoate-CoA ligase [Saccharopolyspora erythraea NRRL 2338] Length = 709 Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 89/262 (33%), Gaps = 28/262 (10%) Query: 39 GIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLI 98 ++P++G V + +++ + + A D + E+ +P++ Sbjct: 60 FVNPRRG------TVQGVKAYPSLSALPAVP--DHVYVMTGADAAVDTVAEAARLGVPVV 111 Query: 99 VCITEGIPVL------DMVRVKARLEKSSSRLIGPNCPGILTPDSCK----IGIMPGSIF 148 ++ G R++A + +R++GP+ G++ P + Sbjct: 112 TVLSSGFAEEGAEGKAREDRLRAAAAQGPTRVVGPSSLGVVNPRNGVMLTGNAAFGEPDT 171 Query: 149 RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATES 208 G + + S+SG++ V + G+G + V GG+ ++ L D S Sbjct: 172 PTGGIFVASQSGSVIGAMVSRARGRGIGFAGLVSTGGEA--DLSLGEICSATLDDPEITS 229 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGG 267 + E A + A A KP+ + G++ T+ H GA+ Sbjct: 230 YALFLESLRHAGDLADFA---AAAHRAGKPVAVYKLGRSDEAAALTVSHTGALAGEDSEA 286 Query: 268 AEDKINAMKEAGICIAPSPARI 289 + G + + Sbjct: 287 E----AFFRACGFVRVATFEGL 304 >gi|319940829|ref|ZP_08015168.1| hypothetical protein HMPREF9464_00387 [Sutterella wadsworthensis 3_1_45B] gi|319805711|gb|EFW02492.1| hypothetical protein HMPREF9464_00387 [Sutterella wadsworthensis 3_1_45B] Length = 869 Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 92/264 (34%), Gaps = 20/264 (7%) Query: 28 AILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAI 87 L + ++PK + G + P A A + + +++ V +A Sbjct: 1 MALSTGLNALWPVNPK---YRFVGEHRCYPN----AYAIPDSEIDLAILCVKSKHLPNA- 52 Query: 88 IESIEAEIPLIVCITEG-----IPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGI 142 ++S+E P V I + + ++ +++ SRL+GPN G + P Sbjct: 53 LKSLEKNPPKAVLFAPQQEGPLIELSTVEQLYESVKRMGSRLLGPNSIGTMAPVQGINAS 112 Query: 143 MPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA 202 R G V ++++S + + + + GLG S V G + ++++ F Sbjct: 113 FWPRTPRPGGVALIAQSAMIATGFIERAAASGLGFSGVVSTGLE--IDVGLAELIDWFAQ 170 Query: 203 DEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVIS 262 D +T I + E A + KP+V AG + A Sbjct: 171 DRSTRVIAVEVEALRCPRAFHA----ALRRATDLKPVVVLRAGPGSGYA-AYRLAANRFG 225 Query: 263 GGKGGAEDKINAMKEAGICIAPSP 286 G + +K AG + Sbjct: 226 TDAGADDAFDALLKNAGAQRVRTF 249 >gi|218961869|ref|YP_001741644.1| FdrA [Candidatus Cloacamonas acidaminovorans] gi|167730526|emb|CAO81438.1| FdrA [Candidatus Cloacamonas acidaminovorans] Length = 505 Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 88/217 (40%), Gaps = 18/217 (8%) Query: 70 AANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNC 129 A+ +I + A +++E + I+ ++ + + D + +K + K ++GP+C Sbjct: 116 GADLCLISIAGKYAAAEAEKALEKGLH-ILLFSDNVSIEDELSLKQKALKKGLLMMGPDC 174 Query: 130 PGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP-- 187 + + + + +G +GI+S SGT E + G S A G GG Sbjct: 175 GTAILNG---VPLAFANNVPRGKIGIVSASGTGLQEISTTIANLSGGISQAFGTGGRDGK 231 Query: 188 --VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAG 245 + G LE L DE TE I++ G+ EE + L + K I F+ Sbjct: 232 KEIGGLMLTACLEYLLEDENTEVIIVTGKP---PCEEVQKKLWELISHSSKPVIANFLIP 288 Query: 246 KTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICI 282 P + + ++ +E A K+AGI + Sbjct: 289 MQVPELPNLYYVRSL-------SETAFFACKKAGIEV 318 >gi|293372432|ref|ZP_06618816.1| CoA binding domain protein [Bacteroides ovatus SD CMC 3f] gi|292632615|gb|EFF51209.1| CoA binding domain protein [Bacteroides ovatus SD CMC 3f] Length = 686 Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 92/262 (35%), Gaps = 26/262 (9%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIE-SIEAEIP 96 ++PK VP F V++ + +V+ +P D + + + + Sbjct: 42 RAVNPK------EKEVQGVPAFADVSDL---PDTDLAVLAIPAVMCPDIVETLASKKQTR 92 Query: 97 LIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRK 150 + ++ G R+ + K + LIGPNC G++ + P Sbjct: 93 AFIILSAGFGEETHEGALLEERILETVNKYGASLIGPNCIGLMNTWHHSVFSQPIPNLNL 152 Query: 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLA--DEATES 208 V ++S SG + +GL ++ +G G E DVL+ D +S Sbjct: 153 KGVDLISSSGATAVFILESAVTKGLQFNSVWSVGNAKQIGVE--DVLQFMDENFDPEKDS 210 Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGA 268 + + I + + L + RK +A A + A + +G + Sbjct: 211 HLKLLYIES--IQNPDRLLFHASSLIRK---GCKIAAIKAGSSESGSRAASSHTGAIASS 265 Query: 269 EDKINA-MKEAGICIAPSPARI 289 + + A ++AGI S + Sbjct: 266 DSAVEALFRKAGIVRCFSREEL 287 >gi|283788560|ref|YP_003368425.1| FdrA protein [Citrobacter rodentium ICC168] gi|282952014|emb|CBG91743.1| FdrA protein [Citrobacter rodentium ICC168] Length = 553 Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 94/240 (39%), Gaps = 15/240 (6%) Query: 63 AEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSS 122 + ++ AN ++ V A E + A ++ ++ +P+ V +K + Sbjct: 110 SACQKLPQANLLLVSVAGEYAASVAREGLLAG-KNVMLFSDNVPLAQEVELKTLAHERGL 168 Query: 123 RLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVG 182 ++GP+C + S ++ +G +G++ SGT E Q + G S A+G Sbjct: 169 IVMGPDCGTAMIAGSPLA---FANVLPEGGIGVIGASGTGIQEMTSQIALHQQGISHAIG 225 Query: 183 IGGDP----VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKP 238 +GG V G + L++ D+AT+ I V + + + K G KP Sbjct: 226 LGGRDLCAEVGGISALTALDMLACDDATQVIAFVSKPPSPLVRT--RIIDAMQKVG--KP 281 Query: 239 IVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298 +V G P R G+ + + A+ + M+ A P G+++ L Sbjct: 282 VVALFLGSK-PEQRREGNVW-LANSLSDAAQLAVRLMRVAQ-QRTRQPDVAGKAIYGLYA 338 >gi|33595358|ref|NP_883001.1| putative acetyl-CoA synthetase [Bordetella parapertussis 12822] gi|33565436|emb|CAE40069.1| putative acetyl-CoA synthetase [Bordetella parapertussis] Length = 480 Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 74/226 (32%), Gaps = 19/226 (8%) Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV------KARLEKSS 121 + ++ VP A+ + L V + G + ++ Sbjct: 91 EEPVDVALFAVPADMVVTALASVPLGRLRLAVILASGFTETGERGALLETALRQYCLETQ 150 Query: 122 SRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GPNC G++ P + +G V I+S+SG + + G+G Sbjct: 151 LPVVGPNCQGVVVPGVKLQMTFSPMYNRMLEGKVAIVSQSGAMAGYMANNLMRRGVGLCC 210 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V G + V D + ++ E + F + + G ++ I Sbjct: 211 VVSSGNEAV--LTAADYIHALADKPECRVVLCYIE----QIKNGRHFARSVQRLGPQQRI 264 Query: 240 VGFVAGK-TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 V +G+ TA H GA+ S + ++ G+ A Sbjct: 265 VVVKSGRSTAGVAAASSHTGAMASDDRVI----DGVFRQLGVVRAR 306 >gi|291303601|ref|YP_003514879.1| CoA-binding domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290572821|gb|ADD45786.1| CoA-binding domain protein [Stackebrandtia nassauensis DSM 44728] Length = 442 Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 53/285 (18%), Positives = 93/285 (32%), Gaps = 50/285 (17%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERT-----AAN 72 G AG + Y T V +HP TV + R A Sbjct: 24 GSAGGRVLDYLRAYGYTGRVIPVHPG---------------ADTVRGLQARPSLAGAEAE 68 Query: 73 ASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV----KARLEKSSSRLIGPN 128 +++ V + A+ + ++A + ++ G V AR ++ +RL+GPN Sbjct: 69 LALLLVGAARIPAALDDCLDAGVTTVIVGASGFAETGAVAAQDALVARAAEAGARLLGPN 128 Query: 129 CPGILTPDSCKIGIMPG----SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIG 184 C G + I G + ++S SG L + ++ GL V G Sbjct: 129 CIGAANLHNGLIASFSPYFEAEPATPGGLALVSHSGGLGFGITSLAAERGLAPGRVVTTG 188 Query: 185 GDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 + +V+ + ++ E ++LK G KPI A Sbjct: 189 NEA--DLSAGEVMCALAEEPDCTGVLAYLESTPDP-----KWLKQLHATG--KPIAALYA 239 Query: 245 GKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 A S GG+E ++ + + GI +A + Sbjct: 240 S-----------ATTASSTNAGGSEARV--LPQFGIELADDVDEL 271 >gi|163797821|ref|ZP_02191766.1| CoA-binding protein [alpha proteobacterium BAL199] gi|159176865|gb|EDP61432.1| CoA-binding protein [alpha proteobacterium BAL199] Length = 695 Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 92/262 (35%), Gaps = 25/262 (9%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 G ++P G P ++ ER + I DA++E+ + Sbjct: 45 YSGAVYPVNPRRDTVLGEKAWP---SLEALPERP--DHIYIVGAAERVEDAVVEAARLGV 99 Query: 96 PLIVCITEGIPVL------DMVRVKARLEKSSSRLIGPNCPGILT----PDSCKIGIMPG 145 P + +G + R+ A K RL+GPN G++ + Sbjct: 100 PAATVLADGFAEMGDEGRARQDRLVACAAKGGLRLLGPNSMGVINVVDRIPFTTNAALEA 159 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 S G + LS+SG+L + + + G+G + V +G + I E A Sbjct: 160 STLLPGRLMALSQSGSLIGTLLSRGAARGIGFAHLVSVGNEADLDVGAIG--EAATALPE 217 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK-TAPPGRTMGHAGAVISGG 264 ++ ++ E + A+F + G KPI+ + G+ + H GA++ Sbjct: 218 VDAFLLFLETLRRPD-RLARFARAAHTAG--KPIIAYKLGRSPEAQALAVSHTGALL--- 271 Query: 265 KGGAEDKINAMKEAGICIAPSP 286 G + ++ GI Sbjct: 272 -GSDQAADAFFRDHGILRVDQF 292 >gi|296535421|ref|ZP_06897616.1| CoA-binding protein [Roseomonas cervicalis ATCC 49957] gi|296264256|gb|EFH10686.1| CoA-binding protein [Roseomonas cervicalis ATCC 49957] Length = 474 Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 77/244 (31%), Gaps = 31/244 (12%) Query: 57 PVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLD------- 109 P ++ E V P A + E + + +V G Sbjct: 68 PCHPSLTALPEVPE--LVVAATPMEAAEAVLEECVTLGVGALVLYAAGFAETARPERVAL 125 Query: 110 MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS------VGILSRSGTLT 163 R+ AR + RL+GPNC G++ S + + +GI+S+SG L Sbjct: 126 QARLVARARQGRVRLVGPNCLGLVDYASGAWASFMS-VPKPWRPLSGPAIGIVSQSGNLG 184 Query: 164 YEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEE-- 221 + Q ++ G + G + D + D + +I ++ E Sbjct: 185 FAL-AQATEAGAAVGRILTCGNSA--DVDVADYVAALAEDPSCSAIALLFEGLSDPRRLL 241 Query: 222 EAAQFLKDEAKRGRKKPIVGFVAGKTAPPG-RTMGHAGAVISGGKGGAEDKINAMKEAGI 280 EAA+ KP+V A + H G++ G A G Sbjct: 242 EAAEL-----AWANDKPLVVHKLATGASGAEAALSHTGSLA----GSEAAYRAAFARCGA 292 Query: 281 CIAP 284 +A Sbjct: 293 VMAE 296 >gi|33599657|ref|NP_887217.1| putative acetyl-CoA synthetase [Bordetella bronchiseptica RB50] gi|33567254|emb|CAE31167.1| putative acetyl-CoA synthetase [Bordetella bronchiseptica RB50] Length = 480 Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 74/226 (32%), Gaps = 19/226 (8%) Query: 68 RTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRV------KARLEKSS 121 + ++ VP A+ + L V + G + ++ Sbjct: 91 EEPVDVALFAVPADMVVTALASVPLGRLRLAVILASGFTETGERGASLETALRQYCLETQ 150 Query: 122 SRLIGPNCPGILTPDSC--KIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179 ++GPNC G++ P + +G V I+S+SG + + G+G Sbjct: 151 LPVVGPNCQGVVVPGVKLQMTFSPMYNQMLEGKVAIVSQSGAMAGYMANNLMRRGVGLCC 210 Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239 V G + V D + ++ E + F + + G ++ I Sbjct: 211 VVSSGNEAV--LTAADYIHALADKPECRVVLCYIE----QIKNGRHFARSVQRLGPQQRI 264 Query: 240 VGFVAGK-TAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAP 284 V +G+ TA H GA+ S + ++ G+ A Sbjct: 265 VVVKSGRSTAGVAAASSHTGAMASDDRVI----DGVFRQLGVVRAR 306 >gi|328956215|ref|YP_004373548.1| protein of unknown function DUF1116 [Coriobacterium glomerans PW2] gi|328456539|gb|AEB07733.1| protein of unknown function DUF1116 [Coriobacterium glomerans PW2] Length = 998 Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 44/198 (22%), Positives = 79/198 (39%), Gaps = 14/198 (7%) Query: 67 ERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIG 126 E AN +V +P A + +++ + + T+ I + D VR+K + + L+G Sbjct: 111 ELPDANLAVFSIPGEYAAPELERALDLGLN-VFSFTDNIAIEDEVRLKKKAHEKGLLLMG 169 Query: 127 PNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD 186 P+C + I I ++ R G++GI+ SGT E + G G A+G GG Sbjct: 170 PDCGTGIISS---IPIAFTNVIRPGNIGIIGASGTGIQEVSCIIDRLGQGCVHAIGTGGR 226 Query: 187 ----PVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGF 242 V D + A AT+ + ++ + + + + + KP+V Sbjct: 227 DLSEDVDAITVKDAIAALDAHAATDVLCIISKPPAPSVRDEVLDM----LQKVTKPVVAI 282 Query: 243 VAGKT--APPGRTMGHAG 258 G+ A GR Sbjct: 283 FLGERPTAHEGRVHLAHT 300 >gi|300785731|ref|YP_003766022.1| 6-carboxyhexanoate-CoA ligase [Amycolatopsis mediterranei U32] gi|299795245|gb|ADJ45620.1| 6-carboxyhexanoate-CoA ligase [Amycolatopsis mediterranei U32] Length = 689 Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 102/274 (37%), Gaps = 29/274 (10%) Query: 33 QTQVVGGIHP--KKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIES 90 ++ G ++P ++ T P F ++ E + + + P + +A+ + Sbjct: 37 RSGFAGAVYPVNRRAGTIDGE-----PAFPSLDALPEVP--DHAFLMTPTAATVEAVGQC 89 Query: 91 IEAEIPLIVCITEGIPVL------DMVRVKARLEKSSSRLIGPNCPGILTPDSCK----I 140 +P++ ++ G + A +S R++GP+ G++ + Sbjct: 90 GRLGVPVVTVLSGGFAEAGPEGAARQRELAAVAAESGIRVLGPSSLGLVNTRTGLTLTAN 149 Query: 141 GIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELF 200 +G + + S SG+L + + + G S V +GG+ G ++ Sbjct: 150 AAFAEPDLPRGGIFVASHSGSLIGALLSRGAACGAAFSHLVSVGGEVDLGI--GEICGAA 207 Query: 201 LADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAV 260 +AD ++ E A+ F ++ A G KP++ + G++ RT Sbjct: 208 VADPDVTGFLLFLENLRHAD-RLRAFAREAAAHG--KPVLAYKLGRS----RTAAELAVS 260 Query: 261 ISGGKGGAEDKINAM-KEAGICIAPSPARIGRSL 293 +G G +D A + GI A + + L Sbjct: 261 HTGSLAGEDDVAAAFLADCGIARAHTLDGLLEGL 294 >gi|163857299|ref|YP_001631597.1| Acetyl-CoA synthetase [Bordetella petrii DSM 12804] gi|163261027|emb|CAP43329.1| Acetyl-CoA synthetase [Bordetella petrii] Length = 1113 Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 93/262 (35%), Gaps = 23/262 (8%) Query: 38 GGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPL 97 G ++P G + F ++ + ++ +P SGA A+ ++I A + Sbjct: 42 GEVYPINAGARQVQG---LAAFASLRAVGR--PIDLAIFAIPASGADAALDDAIAAGVRN 96 Query: 98 IVCITEGIPVLDM------VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPG----SI 147 IV + G L A+ + R++GPNC G + Sbjct: 97 IVMFSAGFAELGEQGVAAQSAFAAKARAAGIRVLGPNCLGFMNVARSVYATFSPVVSTGR 156 Query: 148 FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATE 207 G VG++S+SG A + G+G S V G + + D + D AT Sbjct: 157 VEAGPVGLVSQSGAFGAYAYAMARERGVGLSMWVTTGNE--SDIDVADCIAWMARDPATR 214 Query: 208 SIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGG 267 I+ E G + Q L+ G KP+V G+TA + A ++G Sbjct: 215 VIMAYLE-GCRDGAKLRQALELARAAG--KPVVAVKVGRTALGAQAAASHTAALAGDDAV 271 Query: 268 AEDKINAMKEAGICIAPSPARI 289 + ++ G A + Sbjct: 272 YQTL---FRQHGAWRARTIEEF 290 >gi|147838144|emb|CAN65200.1| hypothetical protein VITISV_028197 [Vitis vinifera] Length = 131 Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 14/81 (17%) Query: 232 KRGRKKPIVGFVAGKTAPPGRTMGHAG--------------AVISGGKGGAEDKINAMKE 277 + +KPIV F+AG TAPPGR MGHAG A++SGGKG A+DKI ++E Sbjct: 44 ESKTEKPIVAFIAGLTAPPGRRMGHAGDNSVGVTFDVGYTEAIVSGGKGTAQDKIKTLRE 103 Query: 278 AGICIAPSPARIGRSLVELLG 298 AG+ + SPA++G +++E Sbjct: 104 AGVTVVESPAKMGVAMLEAFK 124 >gi|157382770|gb|ABV48822.1| ATP citrate lyase alpha subunit [enrichment culture clone BSEaclA4] Length = 325 Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 31/90 (34%) Query: 211 MVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAED 270 M+GE+GG E + LKD K GHAGA A+ Sbjct: 22 MLGELGGDLEYRVVEALKDGIITKPLIAWCIGTISKHFAGEVQFGHAGAKAGADMETADA 81 Query: 271 KINAMKEAGICIAPSPARIGRSLVELLGSL 300 K A++ AG + S + + L Sbjct: 82 KNAALRAAGALVPNSFDXFPELIKGVYEDL 111 >gi|221070150|ref|ZP_03546255.1| CoA-binding domain protein [Comamonas testosteroni KF-1] gi|220715173|gb|EED70541.1| CoA-binding domain protein [Comamonas testosteroni KF-1] Length = 707 Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 85/229 (37%), Gaps = 20/229 (8%) Query: 71 ANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVL------DMVRVKARLEKSSSRL 124 + +++ VP DA+ + A I V + G R+ A + L Sbjct: 71 VDVALLMVPNPAMEDALRDLGAAGIRHAVVLAGGFAETGSEGRTMQERMVATARELGITL 130 Query: 125 IGPNCPGILTPDS---CKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAV 181 +GPNC G + + C G M + KG + I+S+SG + Q G+G + Sbjct: 131 LGPNCLGFINFTTGAVCWTGAMR-TPPLKGGISIVSQSGAVATVMKHFAHQHGVGMNVVA 189 Query: 182 GIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVG 241 G + + G + ++ + DE+T+ I + E A E + KPIV Sbjct: 190 ATGNEAMLGL--AECVDYLVDDESTKVIAVFAETVRDTRLFRAAA---ERALAKAKPIVV 244 Query: 242 FVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN-AMKEAGICIAPSPARI 289 G++ A +G G + + ++ G+ S + Sbjct: 245 LKVGRSD----IATQAAQSHTGSLVGDDSVFDGVCRQLGLVRVRSIEEL 289 >gi|315153803|gb|EFT97819.1| membrane protein FdrA domain protein [Enterococcus faecalis TX0031] Length = 1003 Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 72/182 (39%), Gaps = 12/182 (6%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPN 128 AN ++ +P + +++ ++ + T+ + + D VR+K + ++GP+ Sbjct: 113 PEANVALFSIPGEYGAPEMERALKNDLH-VFSFTDNVSIEDEVRLKKLAHEKGLLMMGPD 171 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 C + I I ++ G++G++ SGT T E + G G A+G GG + Sbjct: 172 CGTGIISS---IPIAFTNVVSPGNIGVVGASGTGTQEVTTIIDRLGGGVVHAIGTGGRDL 228 Query: 189 KG----TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 D + E T+ I ++ + + L + KP+V Sbjct: 229 SDKVGAITVKDAIVALENHEPTDVITVISKPPAKEVRDEVVEL----LQSISKPVVAIFL 284 Query: 245 GK 246 G+ Sbjct: 285 GE 286 >gi|163793503|ref|ZP_02187478.1| hypothetical protein BAL199_03309 [alpha proteobacterium BAL199] gi|159181305|gb|EDP65820.1| hypothetical protein BAL199_03309 [alpha proteobacterium BAL199] Length = 713 Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 87/273 (31%), Gaps = 26/273 (9%) Query: 27 QAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA 86 + + ++PK+ + F +V A +A ++ VP + D Sbjct: 38 YMLKSGFQGPIWPVNPKR------ETVQGLQAFASVDALP--GAPDACIVAVPAAAVPDT 89 Query: 87 IIESIEAEIPLIVCITEGIPVLDMV------RVKARLEKSSSRLIGPNCPGILTPDSCKI 140 + V + G + RV+A R++GPNC G+ + I Sbjct: 90 LEALAAKGAKAAVVFSSGFAEMGEEGKAAQDRVRAIARAGGIRVLGPNCLGVFNAHNGWI 149 Query: 141 GIMPGSI----FRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDV 196 S+ + G V I S+SG A G+ + G + + D Sbjct: 150 ATFSSSVEQELPKPGPVAIASQSGAYGSHAFALMRTRGVQTGILITTGNEA--DVDLADA 207 Query: 197 LELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGH 256 + + DE T+ I E + A KP++ G++A Sbjct: 208 IGYLVRDEHTKVIAAYAEGIRDGDALRAALADAADAG---KPVIFMKVGRSAIGAAAAAS 264 Query: 257 AGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 A ++G + + G+ S ++ Sbjct: 265 HTAALAGSDRVYDGL---FAQYGVLRVSSTDQL 294 >gi|311108997|ref|YP_003981850.1| pimeloyl-CoA synthetase [Achromobacter xylosoxidans A8] gi|310763686|gb|ADP19135.1| pimeloyl-CoA synthetase [Achromobacter xylosoxidans A8] Length = 716 Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 91/282 (32%), Gaps = 26/282 (9%) Query: 18 GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 GK G + + + ++P+ +PV + + +++ Sbjct: 25 GKIGAMPISLLLQHGYGGRIIPVNPR------ADVIAGLPVIPGLDALDA--DVDLAILA 76 Query: 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPVL------DMVRVKARLEKSSSRLIGPNCPG 131 VP + A A+ + ++ V T G R+ A + RL+GPNC G Sbjct: 77 VPAAHAAQALERARPGQVGAAVVFTSGFSETGAHGAGQQERLCAIARERGIRLLGPNCLG 136 Query: 132 ILTPDSCKIGIMPGSIF----RKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDP 187 + + G +G++S+SG A + GLG S + G + Sbjct: 137 FMNVRRNVYATFSPAPANGVVAPGGIGMVSQSGAFGAYAYSMARERGLGLSHWISTGNEA 196 Query: 188 VKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKT 247 D +E D T I+ E + A R KP+V G+T Sbjct: 197 DIDV--ADCIEWLARDADTRVIMAYMEGCRDGAKLRRAL---AAARAAGKPVVVTKIGRT 251 Query: 248 APPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARI 289 + A ++G + ++ G A + Sbjct: 252 QAGAQAAASHTAALAGDDAVYDAL---FRQYGALRARTIEEF 290 >gi|312952021|ref|ZP_07770905.1| membrane protein FdrA domain protein [Enterococcus faecalis TX0102] gi|310630021|gb|EFQ13304.1| membrane protein FdrA domain protein [Enterococcus faecalis TX0102] Length = 986 Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 72/182 (39%), Gaps = 12/182 (6%) Query: 69 TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPN 128 AN ++ +P + +++ ++ + T+ + + D VR+K + ++GP+ Sbjct: 96 PEANVALFSIPGEYGAPEMERALKNDLH-VFSFTDNVSIEDEVRLKKLAHEKGLLMMGPD 154 Query: 129 CPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPV 188 C + I I ++ G++G++ SGT T E + G G A+G GG + Sbjct: 155 CGTGIISS---IPIAFTNVVSPGNIGVVGASGTGTQEVTTIIDRLGGGVVHAIGTGGRDL 211 Query: 189 KG----TEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVA 244 D + E T+ I ++ + + L + KP+V Sbjct: 212 SDKVGAITVKDAIVALENHEPTDVITVISKPPAKEVRDEVVEL----LQSISKPVVAIFL 267 Query: 245 GK 246 G+ Sbjct: 268 GE 269 >gi|324998084|ref|ZP_08119196.1| 6-carboxyhexanoate-CoA ligase [Pseudonocardia sp. P1] Length = 708 Score = 68.9 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 89/268 (33%), Gaps = 25/268 (9%) Query: 36 VVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEI 95 GG++P G P ++ E + + + D + E EA + Sbjct: 54 FTGGVYPVNPRRETVLGERAWPDIASLPEVPDHV-----FVLTDTARVVDTVRECGEAGV 108 Query: 96 PLIVCITEGIPVLDMVR------VKARLEKSSSRLIGPNCPGILTPDSCK----IGIMPG 145 PL+ ++ G + + R++GPN G++ P + Sbjct: 109 PLVTVLSGGFGEGGPEGRERLDALLDVAHRYGVRVVGPNSIGVVNPRNGMLLTANAAFAE 168 Query: 146 SIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA 205 G + S+SG++ + + GLG + V G + ++ E L D Sbjct: 169 PDLPVGPSFVASQSGSVIGALMTRAKARGLGFAGFVSTGSE--VDLTLGEICEATLDDPE 226 Query: 206 TESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGK-TAPPGRTMGHAGAVISGG 264 S + E +A A A R +P+ + G+ A ++ H GA+ Sbjct: 227 IGSYTLFVESMENAGPLAR---FAAAAAERGRPVTVYKLGRSDAAAALSVSHTGALA--- 280 Query: 265 KGGAEDKINAMKEAGICIAPSPARIGRS 292 G ++ + G + + + Sbjct: 281 -GEDDEADAFFRACGFARVDNFEALIEA 307 >gi|317124224|ref|YP_004098336.1| hypothetical protein Intca_1088 [Intrasporangium calvum DSM 43043] gi|315588312|gb|ADU47609.1| protein of unknown function DUF1116 [Intrasporangium calvum DSM 43043] Length = 989 Score = 68.9 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 67/257 (26%), Positives = 108/257 (42%), Gaps = 34/257 (13%) Query: 51 GGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDM 110 GG P T+ R AN +++ VP A ++++EA + ++ ++ +PV D Sbjct: 95 GGFGEAPAPRTLGGVLH