RPSBLAST alignment of GI: 254781050 and protein with PDBid: 2csu
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii OT3} SCOP: c.2.1.8 c.23.4.1 c.23.4.1 Length = 457
Score = 119 bits (298), Expect = 9e-28
Identities = 53/256 (20%), Positives = 106/256 (41%), Gaps = 24/256 (9%)
Query: 40 IHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAIIESIEAEIPLIV 99
++ K+ V + +V + + + ++I VP D +I+ E + +V
Sbjct: 42 VNIKEEEVQ------GVKAYKSVKDIPD--EIDLAIIVVPKRFVKDTLIQCGEKGVKGVV 93
Query: 100 CITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSV 153
IT G + K R+IGPNC GI+ + ++ +KG+V
Sbjct: 94 IITAGFGETGEEGKREEKELVEIAHKYGMRIIGPNCVGIMNTH-VDLNATFITVAKKGNV 152
Query: 154 GILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVG 213
+S+SG L V++T +E +G S + +G +F +++E E ++I +
Sbjct: 153 AFISQSGALGAGIVYKTIKEDIGFSKFISVGNMA--DVDFAELMEYLADTEEDKAIALYI 210
Query: 214 EIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKIN 273
E + ++ + +KKPI+ AGK+ R ++ G +
Sbjct: 211 EGVRNGKKFMEVA----KRVTKKKPIIALKAGKSESGARAASSHTGSLA---GSWKIYEA 263
Query: 274 AMKEAGICIAPSPARI 289
A K++G+ +A + +
Sbjct: 264 AFKQSGVLVANTIDEM 279