RPSBLAST alignment of GI: 254781050 and protein with PDBid: 2yv2
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix K1} Length = 297
Score = 248 bits (634), Expect = 1e-66
Identities = 135/299 (45%), Positives = 197/299 (65%), Gaps = 9/299 (3%)
Query: 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFT 60
M++LVD T+VLVQG+TG+ G+FH + + Y T+VV G+ P KG + G VPV+
Sbjct: 6 MAVLVDSETRVLVQGITGREGSFHAKAMLEY-GTKVVAGVTPGKGGSEVHG----VPVYD 60
Query: 61 TVAEAKER-TAANASVIYVPPSGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEK 119
+V EA N S+++VP A DA+ E+++A I L+V ITEGIPV D +R +
Sbjct: 61 SVKEALAEHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQ 120
Query: 120 SSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSGTLTYEAVFQTSQEGLGQST 179
+ +IGPNCPG +TP K+GIMPG IF++G V ++SRSGTLTYE + +++G+GQST
Sbjct: 121 KGATIIGPNCPGAITPGQAKVGIMPGHIFKEGGVAVVSRSGTLTYEISYMLTRQGIGQST 180
Query: 180 AVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPI 239
+GIGGDP+ G F + L+LF D TE++V++GEIGG EE AA+ +K KP+
Sbjct: 181 VIGIGGDPIVGLSFTEALKLFQEDPQTEALVLIGEIGGDMEERAAEMIKKGE---FTKPV 237
Query: 240 VGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLG 298
+ ++AG+TAPP + MGHAGA+I G G E K+ A++EAG+ +A +P + + + L
Sbjct: 238 IAYIAGRTAPPEKRMGHAGAIIMMGTGTYEGKVKALREAGVEVAETPFEVPELVRKALR 296