RPSBLAST alignment of GI: 254781050 and protein with PDBid: 3dmy

>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.07A {Escherichia coli K12} Length = 480
 Score =  192 bits (489), Expect = 7e-50
 Identities = 46/269 (17%), Positives = 97/269 (36%), Gaps = 24/269 (8%)

Query: 34  TQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTA-ANASVIYVPPSGAGDAIIESIE 92
            + +  +    GS+        +        A ++   AN ++I V    A +   ++++
Sbjct: 5   EEALKQLAQGSGSSQ------ALTQVRRWDSACQKLPDANLALISVAGEYAAELANQALD 58

Query: 93  AEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGS 152
             +  ++  ++ + + D +++K R  +    ++GP+C   +        +   ++  +G+
Sbjct: 59  RNLN-VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSM---IAGTPLAFANVMPEGN 114

Query: 153 VGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGD----PVKGTEFIDVLELFLADEATES 208
           +G++  SGT   E   Q +  G G + A+G+GG      V G   +  LE+  ADE +E 
Sbjct: 115 IGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEV 174

Query: 209 IVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIVGFVAGKTAPPGRTMG-HAGAVISGGKGG 267
           +  V +    A           A +   KP V    G T    R       + +      
Sbjct: 175 LAFVSKPPAEAVRLKIV----NAMKATGKPTVALFLGYTPAVARDENVWFASSL----DE 226

Query: 268 AEDKINAMKEAGICIAPSPARIGRSLVEL 296
           A      +                 +  L
Sbjct: 227 AARLACLLSRVTARRNAIAPVSSGFICGL 255