HHsearch alignment for GI: 254781051 and conserved domain: COG1071
>COG1071 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion].
Probab=99.77 E-value=9.6e-15 Score=131.23 Aligned_cols=312 Identities=18% Similarity=0.202 Sum_probs=224.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCE---ECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
Q ss_conf 8879889999999999999899999864033-622---225646589999999999987379107998067655268999
Q gi|254781051|r 204 SNFSKEEQRDILDKLVRAEGFEKFIDIKYKG-AKR---FGADGSEVIIPAIEEIIRQGVQQGVDEMILGMAHRGRLNVLS 279 (957)
Q Consensus 204 ~~~s~eeK~~iL~~L~~Ae~FE~FL~~Kf~g-~KR---FsLEG~EslIP~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL~ 279 (957)
T Consensus 22 ~~~~~~~l~~~y~~M~l~R~fd~k~~~l~r~G~i~gf~~~~~GqEA~~vg~~~aL~~-----~~D~i~~-~YR~h~~~l~ 95 (358)
T COG1071 22 AALSKEELLELYRLMLLIRRFDEKMLQLQRQGKIGGFYHLYIGQEAVQVGAAAALRP-----GEDWIFP-TYRDHGHLLA 95 (358)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC-----CCCEEEC-CCCCCCEEEE
T ss_conf 568999999999999999999999999985777665757766679999999984388-----9887503-5576501002
Q ss_pred HHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 88537989999985588743223455510015026889835961899971787731000445532367777641666544
Q gi|254781051|r 280 QIMNKLPRSIFYEFKGKGPSEKEYSGDVKYHLGLCCNRQICGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVGE 359 (957)
Q Consensus 280 Nvl~Kp~~~iF~EF~g~~~~~~~~sGDVKYHLG~s~~~~~~g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~~ 359 (957)
T Consensus 96 ~--G~~~~~~~a~~~G~~~g~~kGr-~~~~h~~~~-~---------~~~~~~~~iVg~Q~~~AaG~A~a~k~~~~~---- 158 (358)
T COG1071 96 R--GVPLKEIMAELLGKATGPCKGR-GGSMHYSDK-E---------KGFLGGSGIVGTQIPLAAGAALALKYRGTK---- 158 (358)
T ss_pred C--CCCHHHHHHHHHCCCCCCCCCC-CCCCCCCCC-C---------CCCCCCCCEECCCCCHHHHHHHHHHHHCCC----
T ss_conf 5--9999999999855245888888-886310110-0---------045787840466534799999999974899----
Q ss_pred CCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCCCCCCCHHHHHHCCCE
Q ss_conf 55565445404788862575333467258876451067744365799984160201247010246778400112203405
Q gi|254781051|r 360 KSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCTYASDISKSIGIPI 439 (957)
Q Consensus 360 ~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RSs~Y~TDiAK~i~aPI 439 (957)
T Consensus 159 ---------~~Va~~~~GDGat~-qG~FhEalN~A~v~klP---vvf~ieNN~yAiSvp~~~q~~~~~~~~ra~aygipg 225 (358)
T COG1071 159 ---------DGVAVAFFGDGATN-QGDFHEALNFAAVWKLP---VVFVIENNQYAISVPRSRQTAAEIIAARAAAYGIPG 225 (358)
T ss_pred ---------CCEEEEEECCCCCC-CCHHHHHHHHHHHHCCC---EEEEEECCCCEEECCHHHCCCCHHHHHHHHCCCCCE
T ss_conf ---------81899994578655-33399998999985698---799996687167045664033246775501058872
Q ss_pred EEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCC-CCHHHHHHHHHCCCHHHHHHHHHHHCCCCC
Q ss_conf 8742678899999999999999973897399864211256564354223-557888886718998999999986448989
Q gi|254781051|r 440 FHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEPSF-TQPMMYKTIRSHKSVLQLYADSLMKNQVIS 518 (957)
Q Consensus 440 ~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~DeP~f-TQP~mY~~I~~hp~v~~~Y~~~Li~~g~it 518 (957)
T Consensus 226 v~VDG~D~~avy~~~~~A~e~AR~g~GPtLIE~~tYR~~~HS~sDd~~~YRskeE~~~~~-~~DPi~r~~~~L~~~g~~s 304 (358)
T COG1071 226 VRVDGNDVLAVYEAAKEAVERARAGEGPTLIEAVTYRYGGHSTSDDPSKYRSKEEVEEWK-KRDPIVRLRKYLIEAGILS 304 (358)
T ss_pred EEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHH-CCCHHHHHHHHHHHCCCCC
T ss_conf 787797799999999999999974899889999875358887779833367989998775-0694999999999768989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCC
Q ss_conf 8999999999999977566654125-876566665
Q gi|254781051|r 519 KQELQSLANNWHKYLEAEYKESESY-CPEKLGLLH 552 (957)
Q Consensus 519 ~~e~~~~~~~~~~~l~~~~~~~k~~-~~~~~~~~~ 552 (957)
T Consensus 305 ee~~~~i~~e~~~~V~ea~e~a~~~p~P~~~~~~~ 339 (358)
T COG1071 305 EEELEAIEAEAKAEVDEAVEFAEASPYPDVSELFE 339 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 99999999999999999999997089998467651