HHsearch alignment for GI: 254781051 and conserved domain: COG4231
>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion].
Probab=93.30 E-value=0.75 Score=26.12 Aligned_cols=211 Identities=17% Similarity=0.146 Sum_probs=117.2
Q ss_pred CCCEEEEEECCCEECCC--CCHHCCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 36579998416020124--7010246778400112203405874267889999999999999997389739986421125
Q gi|254781051|r 401 VAGNIHLIINNQIGFTT--NPSSARSCTYASDISKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRF 478 (957)
Q Consensus 401 tGGTiHiVvNNQIGFTT--~p~d~RSs~Y~TDiAK~i~aPI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~ 478 (957)
T Consensus 108 v~GGlviv~aDDpg~~SSqneqdsr--~----y~~~a~iPvLeP~--d~Qea~d~~~~afelSe~~~~pVil--r~ttr~ 177 (640)
T COG4231 108 VTGGLVIVVADDPGMHSSQNEQDSR--A----YGKFALIPVLEPS--DPQEAYDYVKYAFELSEKSGLPVIL--RTTTRV 177 (640)
T ss_pred CCCCEEEEECCCCCCCCCCCHHHHH--H----HHHHCCCEEECCC--CHHHHHHHHHHHHHHHHHHCCCEEE--EEEEEE
T ss_conf 6660899981698864453566768--9----8885076120689--8699999999998777873897899--998643
Q ss_pred CCCCCCCCCCCCHHHHHHHHHCCCHHHH-HHHHHHHCCCCCHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CC
Q ss_conf 6564354223557888886718998999-9999864489898999-9999999999775666541258765666656-86
Q gi|254781051|r 479 GHNEGDEPSFTQPMMYKTIRSHKSVLQL-YADSLMKNQVISKQEL-QSLANNWHKYLEAEYKESESYCPEKLGLLHN-GE 555 (957)
Q Consensus 479 GHNE~DeP~fTQP~mY~~I~~hp~v~~~-Y~~~Li~~g~it~~e~-~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~-~~ 555 (957)
T Consensus 178 ~h~~~~V-------~~~~~~~~~~~~~~~~~~k~~~~~V~~p~~~~~~~~~~l~~k~~a~~~~~~~~~~n~v~~~~~~~l 250 (640)
T COG4231 178 SHSRGDV-------EVGLNRRPIVEPEDEFFIKDPGRYVRVPANALRHRHRKLLEKWEAAEEFINANPLNRVEGSDDAKL 250 (640)
T ss_pred ECCCEEE-------EECCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
T ss_conf 0221028-------824666787765212434786632306742112567889999999999986486563136887856
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCC---CCHHHHHHHHHHHHH------HCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 266677899999999887436899862---056778889989987------33435642114789888988635831578
Q gi|254781051|r 556 NERKNSVSKEILKKIGSSIIRLPKSFN---THKIVERLMANRQKM------IETGKGIDWSMAESLAFGSLCYEGYKVRL 626 (957)
Q Consensus 556 ~~~~T~v~~~~L~~i~~~l~~~Pe~f~---~h~~v~k~~~~R~~~------~~~~~~iDW~~AE~LA~~SLl~eG~~VRl 626 (957)
T Consensus 251 GII~~G~ay~yVkeAl~~lgl~~~~lklg~~~Plp~~~i~~F~~g~~~vlVVEE~~P----~iE~qv~~~l~~~~~~~~v 326 (640)
T COG4231 251 GIIASGIAYNYVKEALEDLGLDDELLKLGTPYPLPEQLIENFLKGLERVLVVEEGEP----FIEEQVKALLYDAGLPVEV 326 (640)
T ss_pred EEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCH----HHHHHHHHHHHHCCCCEEE
T ss_conf 899357217999999997588741789458757888999999826847999955870----4899999998754885474
Q ss_pred ECCCCC
Q ss_conf 501002
Q gi|254781051|r 627 SGQDCE 632 (957)
Q Consensus 627 sGQD~~ 632 (957)
T Consensus 327 ~GKd~g 332 (640)
T COG4231 327 HGKDEG 332 (640)
T ss_pred ECCCCC
T ss_conf 034456