HHsearch alignment for GI: 254781051 and conserved domain: TIGR00239
>TIGR00239 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 component; InterPro: IPR011603 2-oxoglutarate dehydrogenase is a key enzyme in the TCA cycle, converting 2-oxoglutarate, coenzyme A and NAD(+) to succinyl-CoA, NADH and carbon dioxide . This activity of this enzyme is tightly regulated and it is a major determinant of the metabolic flux through the TCA cycle. This enzyme is composed of multiple copies of three different subunits: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3) which is often shared with similar enzymes such as pyruvate dehydrogenase . The E2 component forms a large multimeric core which binds the peripheral E1 and E3 subunits. The substrate is transferred between the active sites of the different subunits by a lipoyl moiety, bound to a lysine residue from the E2 polypeptide. This entry represents the E1 subunit of 2-oxoglutarate dehydrogenase. It catalyses the decarboxylation of this compound in a thiamine pyrophosphate-dependent manner, transferring the resultant succinyl group onto the liposyl moiety bound to the E2 subunit. The E1 ortholog from Corynebacterium glutamicum is unusual in having an N-terminal extension that resembles the E2 component of 2-oxoglutarate dehydrogenase enzyme. ; GO: 0004591 oxoglutarate dehydrogenase (succinyl-transferring) activity, 0030976 thiamin pyrophosphate binding, 0006096 glycolysis.
Probab=100.00 E-value=0 Score=1717.45 Aligned_cols=924 Identities=45% Similarity=0.762 Sum_probs=836.5
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 636789689999999987380507989999987367643-3333343444322222222111233344555666555633
Q gi|254781051|r 14 FLDGTNCCYIEDLYKSYQEDPSSVCKDWYPLFSFLDENS-EEYDNLEDGIASFLKEESVASAVFSQKKSAVESSCSLGET 92 (957)
Q Consensus 14 FL~g~Na~YIEeLYekYL~DP~SVd~sWr~fF~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (957)
T Consensus 1 ~~~~~~~~~~~~~~~~~~~dp~~~~~~w~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 71 (990)
T TIGR00239 1 FLGGANLGYIEELYEAYLKDPSSVDPSWRETFDELPGPGIPAPEQFHAPS---------PSYFRRLAGAAPKGTVTAGDP 71 (990)
T ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC---------HHHHHHHHCCCCCCHHHHHHH
T ss_conf 97775226789999975057310232379898642777663543323454---------355655311110000001004
Q ss_pred HHHHHHHHHHHHH-HHHHHCCCHHHCCCCCCC----CCCCCCCCCCCHHHCCCCHHHCCCEEECCCC-CCCC----CCC-
Q ss_conf 6789999999999-999881704540167777----7766787767876669997881715725665-7877----778-
Q gi|254781051|r 93 QSVKDFFQVMKMI-DAYRSYGHFKANIDPLGY----NSHQKDLSELSPAHYGFVKADYDRKICMKGV-LGLE----SAT- 161 (957)
Q Consensus 93 ~~~~kq~rV~~LI-~AYR~~GHl~A~lDPLgl----~~~~~~~peL~~~~yGLse~DLd~~f~~~~~-~g~~----~~t- 161 (957)
T Consensus 72 ~~~~~~~~~~~~~c~~~~~~g~~~~~~~pl~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 151 (990)
T TIGR00239 72 DENASLVKLLQLLCRAYRFRGHLKANLDPLGYSFGSNWDEPKPPELDLSYYGLTEEDLDETFNLGPGVLPKDARDGPKKL 151 (990)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHH
T ss_conf 55578899999988776530210013440000002223555553356320355345432321256300111000002233
Q ss_pred --HHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf --9999999998406430277724899899999999841457788879889999-9999999998999998640336222
Q gi|254781051|r 162 --IPEIVDVLSHLYCSNIGVEFMHIVDSIERDWVRNTIEDYDFSSNFSKEEQRD-ILDKLVRAEGFEKFIDIKYKGAKRF 238 (957)
Q Consensus 162 --L~eIi~~L~~tYCgsIGvEymHI~d~eer~Wlq~riE~~~~~~~~s~eeK~~-iL~~L~~Ae~FE~FL~~Kf~g~KRF 238 (957)
T Consensus 152 ~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~l~~~~~g~~~~ 231 (990)
T TIGR00239 152 GNGLELLEYLKKTYCGSIGLEFDHVPDFEEKDWLQEKIESGLEPFQFNSEEKLSAFLDRLTAAEGFERFLGAKFPGAKRF 231 (990)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 23789999998751221241120134246788998876410002331146788999987665434577652016662100
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCC----------CCCCCCCC
Q ss_conf 25646589999999999987379107998067655268999885379899999855887432----------23455510
Q gi|254781051|r 239 GADGSEVIIPAIEEIIRQGVQQGVDEMILGMAHRGRLNVLSQIMNKLPRSIFYEFKGKGPSE----------KEYSGDVK 308 (957)
Q Consensus 239 sLEG~EslIP~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL~Nvl~Kp~~~iF~EF~g~~~~~----------~~~sGDVK 308 (957)
T Consensus 232 ~~~g~~~~~p~~~~~~~~~~~~g~~~~~~g~~~~g~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~~~g~g~~~ 311 (990)
T TIGR00239 232 SLEGLDALVPGLKELIRHSVKSGTEDVVLGMAHRGRLNVLVNVLGKPPESLFDEFAGKPASDLPSEDPLESATDGTGDVK 311 (990)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 22320245556899987554204112222000123045677653263135677641653101344342100125554112
Q ss_pred CCCC-EEEEEEECCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHH
Q ss_conf 0150-268898359618999717877310004455323677776416665445556544540478886257533346725
Q gi|254781051|r 309 YHLG-LCCNRQICGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPLIIHGDAAFAGQGIV 387 (957)
Q Consensus 309 YHLG-~s~~~~~~g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~vlpiliHGDAAfaGQGVV 387 (957)
T Consensus 312 ~~~g~~~~~~~~~~~~~~l~l~~~p~~l~~~~p~~~g~~~~~~~~~~~~----g~p~~~~~~~l~~~~~gd~~~~g~g~~ 387 (990)
T TIGR00239 312 YHLGRFGSDFTTDGKLVHLPLAFNPSHLEIVSPVVLGSTRARLERLNDL----GYPVPEETKVLAILLHGDAAFAGQGVV 387 (990)
T ss_pred HHHHCCCCCCCCCCCCCEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHC----CCCCCCCCCEEEEEEECCCCCCCCCHH
T ss_conf 3330012221125662012210364200010301210246666554313----786542332035665054223454235
Q ss_pred HHHHHHHCCCCCCCCCEEEEEECCCEECCC-CCHHCCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 887645106774436579998416020124-7010246778400112203405874267889999999999999997389
Q gi|254781051|r 388 SETFGLSGLSGYTVAGNIHLIINNQIGFTT-NPSSARSCTYASDISKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKFHK 466 (957)
Q Consensus 388 ~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT-~p~d~RSs~Y~TDiAK~i~aPI~HVN~DdpEav~~~~~lA~~yR~~F~k 466 (957)
T Consensus 388 ~~~~~~~~~~~~~~gg~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~p~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 467 (990)
T TIGR00239 388 QETLNLSSLRGYSVGGTIHIVINNQIGFTTSNPADARSTPYCSDLAKGIEAPIFHVNADDPEAVAFAFRLAVEYRNTFKR 467 (990)
T ss_pred HHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 55430100454223642688750521222366210014432234554320333662476446788999888887653121
Q ss_pred CEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHH----HHHHHHHHHHHHHHHHHC
Q ss_conf 7399864211256564354223557888886718998999999986448989899999----999999997756665412
Q gi|254781051|r 467 SVVIDIVCYRRFGHNEGDEPSFTQPMMYKTIRSHKSVLQLYADSLMKNQVISKQELQS----LANNWHKYLEAEYKESES 542 (957)
Q Consensus 467 DVvIDlv~YRr~GHNE~DeP~fTQP~mY~~I~~hp~v~~~Y~~~Li~~g~it~~e~~~----~~~~~~~~l~~~~~~~k~ 542 (957)
T Consensus 468 d~~~d~~~~~~~g~~~~d~p~~~~p~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 547 (990)
T TIGR00239 468 DVLIDLVGYRRHGHNEADEPSATQPLLYDKIKKHPTPRKVYADKLVSEGVVTEEDVTEHKKWVWNLYRDALEKGDDVVPS 547 (990)
T ss_pred CCEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 00010011101467644564210036788775045302455656653011114566556778888777776544431121
Q ss_pred CCC----------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH-HHHHCCCCCCCCHHHHH
Q ss_conf 587----------6566665686266677899999999887436899862056778889989-98733435642114789
Q gi|254781051|r 543 YCP----------EKLGLLHNGENERKNSVSKEILKKIGSSIIRLPKSFNTHKIVERLMANR-QKMIETGKGIDWSMAES 611 (957)
Q Consensus 543 ~~~----------~~~~~~~~~~~~~~T~v~~~~L~~i~~~l~~~Pe~f~~h~~v~k~~~~R-~~~~~~~~~iDW~~AE~ 611 (957)
T Consensus 548 ~~~~~~~~~~~~~~p~~l~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~ 627 (990)
T TIGR00239 548 WREWLTAAWEWLKSPPELPEEWLPGYPDKVPESRLKELGKLLGEWPEGLEFHPRLAKIYGDRGKALFDGEKLLDWGLAES 627 (990)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCHHCCCHHH
T ss_conf 11234455541146421244445545641037889999886531000134566788875200001221442000010124
Q ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCC
Q ss_conf 88898863583157850100223332302799977888445563442789845999824311110134320221138653
Q gi|254781051|r 612 LAFGSLCYEGYKVRLSGQDCERGTFSHRHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFEYGYSLNNLNA 691 (957)
Q Consensus 612 LA~~SLl~eG~~VRlsGQD~~RGTFshRHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFEyGys~~~p~~ 691 (957)
T Consensus 628 ~~~~~~~~~g~~~~~~g~d~~~g~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~p~~ 707 (990)
T TIGR00239 628 LAFATLLDDGTPVRLSGEDSGRGTFFHRHAVLHDQESGAGYTPLSHLHNGKGDFAVWNSPLSEGGVLGFEYGYALTSPET 707 (990)
T ss_pred HHHHHHHHCCCCEEECCCCCCCCHHHHHHHHEECCCCCCEECCCHHCCCCCCCEEEECCCCCCCCHHHEECCCCCCCCCE
T ss_conf 44444431574303215533222012211110035566301010000245432121012012000000001332358742
Q ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCC--------------
Q ss_conf 111000024424541022565542025762333681354368888888765644057887521437--------------
Q gi|254781051|r 692 LTIWEAQFGDFANGAQVILDQFITAGEQKWLCTSNLVCLLPHGYEGQGPEHSSARLERFLQMCAEN-------------- 757 (957)
Q Consensus 692 L~iWEAQFGDF~NgAQviiDqfiss~e~KW~~~sglvllLPHGyeGqGPEHSSaRlERfLQl~a~~-------------- 757 (957)
T Consensus 708 l~~w~~~~gd~~~~~~~~~d~~~~~g~~~w~~~~gl~~~lp~g~~g~gp~~~~~~~~~~l~l~~~~p~~~p~~~~~~~~~ 787 (990)
T TIGR00239 708 LVLWEAQFGDFANGAQVVIDQFISGGEQKWGRKCGLVLLLPHGYEGQGPEHSSGRLERFLQLAAEDPRYFPSEEKLQRQH 787 (990)
T ss_pred EEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
T ss_conf 56630000332232132234445201343332226135515676777764204688999987513654476456776432
Q ss_pred ---CEEEEECCCHHHHHHHHHHHH---CCCCCCCEEEECCCHHHCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf ---826972488999999999974---35348868985660221080126887893799860351577643344454445
Q gi|254781051|r 758 ---NMYVANCTSPANYFHILRRQI---YDRSSRPLIMMAPKSLLRHKRVVSSLSDMTCGSVFQAVLSDDAEYHGKTSVKL 831 (957)
Q Consensus 758 ---N~~V~~~ttpAq~FH~LRRQ~---~r~~rkPLiv~tPKsLLR~~~a~S~l~d~~~g~~F~~vi~d~~~~~~~~~~~~ 831 (957)
T Consensus 788 ~dc~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pl~~~~~~~ll~~p~~~~~~~~~~~g~-~~~~~~~~~~~-----~~~ 861 (990)
T TIGR00239 788 QDCNWQVCVPTTPAQLFHILRRQAKLLLREFRRPLVLLSPKSLLRHPLAVSSLEELSEGG-FQPVIGEIEEG-----GLS 861 (990)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHCCHHHHHHHHHHCCC-CHHHHHHHHCC-----CCC
T ss_conf 035306751342478999988888888876414200012166651410245577652353-10223212202-----222
Q ss_pred CCHHHCCEEEEECCHHHHHH--HHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCC-EEEEECCCCCCCCCHHHHH
Q ss_conf 79545768998688578999--99999769986899984014868289999998537998-3998067853178457899
Q gi|254781051|r 832 KEDSHIRRVILCTGKVYYDL--LDNRDMRNIADIYLLRIEQLYPFPEDYLIKVLSRFVQA-EIVWCQEEPQNMGAWTFIE 908 (957)
Q Consensus 832 ~~~~~v~rvi~csGKvyydL--~~~r~~~~~~~vaivRiEqLyPfP~~~l~~~l~~y~~~-e~vW~QEEp~N~GaW~~v~ 908 (957)
T Consensus 862 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~p~~~~~~~~~~~~~~~~~~w~~~~p~~~g~w~~~~ 941 (990)
T TIGR00239 862 LDPEEVKRLVLCSGKVYYDLSVHEQRRENGDKDLAILRIEQLYPFPHKGLKELLEPYPNLKEIVWCQEEPLNQGAWGYSE 941 (990)
T ss_pred CCHHHCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
T ss_conf 45113003233336122346666655413641010101122156754789999852145100223112433445310013
Q ss_pred HHHHHHHHHC-CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 7699998750-56776018975366467233867899999999999871
Q gi|254781051|r 909 PYLEKVLHSI-GADYSRVRYVGRLPSASTAVGHMSRHLEQLSSFIEDAL 956 (957)
Q Consensus 909 ~rl~~~l~~~-~~~~~~~~y~gR~~~aspA~G~~~~H~~e~~~li~~a~ 956 (957)
T Consensus 942 ~~~~~~~~~~d~~~d~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~ 990 (990)
T TIGR00239 942 PYLTEVLPEGDKYKDVKLRYAGRPPSGSPAVGYPSLHLKEEDNLLKDAL 990 (990)
T ss_pred CHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 1022212454321210221216775555322413566555666775419