HHsearch alignment for GI: 254781051 and conserved domain: TIGR03182
>TIGR03182 PDH_E1_alph_y pyruvate dehydrogenase E1 component, alpha subunit. Members of this protein family are the alpha subunit of the E1 component of pyruvate dehydrogenase (PDH). This model represents one branch of a larger family that E1-alpha proteins from 2-oxoisovalerate dehydrogenase, acetoin dehydrogenase, another PDH clade, etc.
Probab=99.89 E-value=2.9e-19 Score=165.46 Aligned_cols=296 Identities=20% Similarity=0.225 Sum_probs=233.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCE--E--CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHC
Q ss_conf 889999999999999899999864033622--2--256465899999999999873791079980676552689998853
Q gi|254781051|r 208 KEEQRDILDKLVRAEGFEKFIDIKYKGAKR--F--GADGSEVIIPAIEEIIRQGVQQGVDEMILGMAHRGRLNVLSQIMN 283 (957)
Q Consensus 208 ~eeK~~iL~~L~~Ae~FE~FL~~Kf~g~KR--F--sLEG~EslIP~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL~Nvl~ 283 (957)
T Consensus 1 ke~ll~~yr~M~~~R~~e~~~~~l~~qG~i~g~~h~~~GqEa~~vg~------~~~l~~~D~i~~-~yR~hg~~la~--G 71 (315)
T TIGR03182 1 KEELLELYRDMLLIRRFEEKAGQLYGMGKIGGFCHLYIGQEAVAVGL------IAALKPDDYVIT-SYRDHGHALAR--G 71 (315)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH------HHHCCCCCEEEE-CCCCHHHHHHH--C
T ss_conf 97999999999999999999999997798884623888769999999------997799888985-13378999995--8
Q ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 79899999855887432234555100150268898359618999717877310004455323677776416665445556
Q gi|254781051|r 284 KLPRSIFYEFKGKGPSEKEYSGDVKYHLGLCCNRQICGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVGEKSIS 363 (957)
Q Consensus 284 Kp~~~iF~EF~g~~~~~~~~sGDVKYHLG~s~~~~~~g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~~~~~~ 363 (957)
T Consensus 72 ~~~~~~~ael~g~~~g~~~Grgg-s~H~~~~----------~~~~~~~~~ivg~~~p~A~G~A~a~k~~~~--------- 131 (315)
T TIGR03182 72 VPPKEVMAELTGRATGCSKGKGG-SMHMFDR----------EKNFYGGHGIVGAQVPLATGLAFANKYRGN--------- 131 (315)
T ss_pred CCHHHHHHHHHCCCCCCCCCCCC-CCCCCCC----------CCCCCCCCCCCCCCCCHHHHHHHHHHHHCC---------
T ss_conf 99999999983678899999999-7764452----------127778873040374387769999986089---------
Q ss_pred CCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCCCCCCCHHHHHHCCCEEEEC
Q ss_conf 54454047888625753334672588764510677443657999841602012470102467784001122034058742
Q gi|254781051|r 364 LVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCTYASDISKSIGIPIFHVN 443 (957)
Q Consensus 364 ~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RSs~Y~TDiAK~i~aPI~HVN 443 (957)
T Consensus 132 -----~~v~v~~~GDGa~~-~G~f~EalN~A~~~~lP---vifv~eNN~yaist~~~~~~~~~~i~~ra~~~gi~~~~vD 202 (315)
T TIGR03182 132 -----DNVTACFFGDGAAN-QGQFYESFNMAALWKLP---VIFVIENNLYAMGTSVERSSSVTDLYKRGESFGIPGERVD 202 (315)
T ss_pred -----CCEEEEEECCCCCC-CCHHHHHHHHHHCCCCC---EEEEEEECCCCCCCCHHHHCCCCHHHHHHHHCCCCEEEEE
T ss_conf -----98799995788665-34399999887414898---8999952874155767775366336665543699858983
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 67889999999999999997389739986421125656435422355788888671899899999998644898989999
Q gi|254781051|r 444 GDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEPSFTQPMMYKTIRSHKSVLQLYADSLMKNQVISKQELQ 523 (957)
Q Consensus 444 ~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~DeP~fTQP~mY~~I~~hp~v~~~Y~~~Li~~g~it~~e~~ 523 (957)
T Consensus 203 GnD~~av~~~~~~Ai~~~R~g~gP~lie~~tyR~~gHs~~D~~~YR~~~E~~~w~~r-DPi~~~~~~L~~~g~~~~~~~~ 281 (315)
T TIGR03182 203 GMDVLAVREAAKEAVERARSGKGPILLEMKTYRFRGHSMSDPAKYRSKEEVEEWRKR-DPIEKLKARLIEQGIASEEELK 281 (315)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHC-CHHHHHHHHHHHCCCCCHHHHH
T ss_conf 577899999999999997559998899987426888899873024698999988847-9399999999987999999999
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999997756665412
Q gi|254781051|r 524 SLANNWHKYLEAEYKESES 542 (957)
Q Consensus 524 ~~~~~~~~~l~~~~~~~k~ 542 (957)
T Consensus 282 ~i~~~~~~ev~~a~~~A~~ 300 (315)
T TIGR03182 282 EIDKEVRAEVEEAVEFAEN 300 (315)
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999985