HHsearch alignment for GI: 254781051 and conserved domain: cd02006
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl). E. coli glyoxylate carboligase, plays a key role in glyoxylate metabolism where it catalyzes the condensation of two molecules of glyoxylate to give tartronic semialdehyde and carbon dioxide. This enzyme requires TPP, magnesium ion and FAD as cofactors.
Probab=96.86 E-value=0.017 Score=38.51 Aligned_cols=166 Identities=17% Similarity=0.244 Sum_probs=110.2
Q ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE-EECCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 989999985588743223455510015026889-8359618999717877310004455323677776416665445556
Q gi|254781051|r 285 LPRSIFYEFKGKGPSEKEYSGDVKYHLGLCCNR-QICGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVGEKSIS 363 (957)
Q Consensus 285 p~~~iF~EF~g~~~~~~~~sGDVKYHLG~s~~~-~~~g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~~~~~~ 363 (957)
T Consensus 9 ~P~rv~~~l~~~lp~d~ivv~D~G~~~~~~~~~~~~~-~p~~~~~s~~~g~mG~glPaAiGaklA~Pd------------ 75 (202)
T cd02006 9 KPQRVYEEMNKAFGRDVRYVTTIGLSQIAGAQMLHVY-KPRHWINCGQAGPLGWTVPAALGVAAADPD------------ 75 (202)
T ss_pred CHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCC-CCCEEECCCCCCHHHHHHHHHHHHHHHCCC------------
T ss_conf 9999999999757998199987868999999856868-999186589987033189999999987699------------
Q ss_pred CCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCC---------EECCCC------CHHCCCC---
Q ss_conf 5445404788862575333467258876451067744365799984160---------201247------0102467---
Q gi|254781051|r 364 LVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQ---------IGFTTN------PSSARSC--- 425 (957)
Q Consensus 364 ~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQ---------IGFTT~------p~d~RSs--- 425 (957)
T Consensus 76 ----r~Vv~--i~GDGsf~m~~~EL~Ta~r~~lp------ii~vV~NN~~~g~ir~~q~~~~~~~~~~~~~~~~~~~~~~ 143 (202)
T cd02006 76 ----RQVVA--LSGDYDFQFMIEELAVGAQHRIP------YIHVLVNNAYLGLIRQAQRAFDMDYQVNLAFENINSSELG 143 (202)
T ss_pred ----CEEEE--EECCCCHHHHHHHHHHHHHHCCC------EEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf ----85999--97684055129999999996998------3999997955689999999853474423254666885446
Q ss_pred CCCC---HHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 7840---011220340587426788999999999999999738973998642112
Q gi|254781051|r 426 TYAS---DISKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRR 477 (957)
Q Consensus 426 ~Y~T---DiAK~i~aPI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr 477 (957)
T Consensus 144 ~~~~D~~kiAea~G~~g~rV--~~~~eL~~Al~~A~~~~~~~~~P~lIeviidr~ 196 (202)
T cd02006 144 GYGVDHVKVAEGLGCKAIRV--TKPEELAAAFEQAKKLMAEHRVPVVVEAILERV 196 (202)
T ss_pred CCCCCHHHHHHHCCCEEEEE--CCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
T ss_conf 78989999999789989997--999999999999998751479978999997671