HHsearch alignment for GI: 254781051 and conserved domain: cd02008
>cd02008 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit. IOR catalyzes the oxidative decarboxylation of arylpyruvates, such as indolepyruvate or phenylpyruvate, which are generated by the transamination of aromatic amino acids, to the corresponding aryl acetyl-CoA.
Probab=93.07 E-value=0.49 Score=27.56 Aligned_cols=157 Identities=25% Similarity=0.286 Sum_probs=86.5
Q ss_pred EEEECCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCC-CCCEEEEEEECCCEEEEEECCCCCCCHHCCHHHH
Q ss_conf 998067655268999885379899999855887432234555100-1502688983596189997178773100044553
Q gi|254781051|r 265 MILGMAHRGRLNVLSQIMNKLPRSIFYEFKGKGPSEKEYSGDVKY-HLGLCCNRQICGKDVKLLLQSNPSHLEFVDPVVI 343 (957)
Q Consensus 265 iviGMaHRGRLNVL~Nvl~Kp~~~iF~EF~g~~~~~~~~sGDVKY-HLG~s~~~~~~g~~v~lsL~~NPSHLEaVnPVv~ 343 (957)
T Consensus 6 ~CpGCgh~~~~~al~~~~~~---------------~~v~~~~IGC~~~~~~~~~--~~~~~~~-------~mG~~~~~A~ 61 (178)
T cd02008 6 LCPGCPHRPSFYALRKAFKK---------------DSIVSGDIGCYTLGALPPL--NAIDTCT-------CMGASIGVAI 61 (178)
T ss_pred CCCCCCCCHHHHHHHHHHCC---------------CCEEEECCCHHHHHHCCCC--CEEEEEE-------CCCCCHHHHH
T ss_conf 68899985999999974015---------------8679816371014126883--0000111-------3577378997
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCC----CC
Q ss_conf 23677776416665445556544540478886257533346725887645106774436579998416020124----70
Q gi|254781051|r 344 GSVRARQDLKAGIVGEKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTT----NP 419 (957)
Q Consensus 344 G~~RAkQd~~~d~~~~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT----~p 419 (957)
T Consensus 62 G~k~a~p~----------------~~Vv~~~--GDG~~~~~G~-~~l~~av~~~----~~it~iv~nN~~ygmTggQ~sp 118 (178)
T cd02008 62 GMAKASED----------------KKVVAVI--GDSTFFHSGI-LGLINAVYNK----ANITVVILDNRTTAMTGGQPHP 118 (178)
T ss_pred HHHHHCCC----------------CCEEEEE--CCHHHHHHHH-HHHHHHHHHC----CCEEEEEEECCCCCCCCCCCCC
T ss_conf 78987899----------------8379995--7627766319-9999999829----7959999948530013675589
Q ss_pred ---HHCCCCCCCCHHH---HHHCCCEEEE-CCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf ---1024677840011---2203405874-267889999999999999997389739986
Q gi|254781051|r 420 ---SSARSCTYASDIS---KSIGIPIFHV-NGDDPEAVIRVVRMAVSFRMKFHKSVVIDI 472 (957)
Q Consensus 420 ---~d~RSs~Y~TDiA---K~i~aPI~HV-N~DdpEav~~~~~lA~~yR~~F~kDVvIDl 472 (957)
T Consensus 119 ~~~~~~~~~~~~~d~~~~a~a~G~~~v~~~~~~d~~~~~~~l~~A~~~----~G~s~I~v 174 (178)
T cd02008 119 GTGKTLTEPTTVIDIEALVRAIGVKRVVVVDPYDLKAIREELKEALAV----PGVSVIIA 174 (178)
T ss_pred CCCCCCCCCCCCCCHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCC----CCCEEEEE
T ss_conf 988877787898798999997799999997844199999999999738----99789999