HHsearch alignment for GI: 254781051 and conserved domain: cd02012
>cd02012 TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the pentose phosphate pathway and provides precursors for nucleotide, aromatic amino acid and vitamin biosynthesis. In addition, the enzyme plays a central role in the Calvin cycle in plants. Typically, TKs are homodimers. They require TPP and divalent cations, such as magnesium ions, for activity.
Probab=97.54 E-value=0.0011 Score=47.57 Aligned_cols=123 Identities=20% Similarity=0.223 Sum_probs=88.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCC
Q ss_conf 04455323677776416665445556544540478886257533346725887645106774436579998416020124
Q gi|254781051|r 338 VDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTT 417 (957)
Q Consensus 338 VnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT 417 (957)
T Consensus 110 gls~a~G~A~a~k~~~------------~~~~v~~~i--GDGel~-EG~~wEAl~~A~~~--~L~nLi~ivD~N~~~~~g 172 (255)
T cd02012 110 GLSVAVGMALAEKLLG------------FDYRVYVLL--GDGELQ-EGSVWEAASFAGHY--KLDNLIAIVDSNRIQIDG 172 (255)
T ss_pred HHHHHHHHHHHHHHCC------------CCCCEEEEE--CCCCCC-CCHHHHHHHHHHHC--CCCCEEEEECCCCCEECC
T ss_conf 8999999999998628------------887179994--251103-31289999998555--877569998689826256
Q ss_pred CCHHCCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 701024677840011220340587426788999999999999999738973998642112565
Q gi|254781051|r 418 NPSSARSCTYASDISKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGH 480 (957)
Q Consensus 418 ~p~d~RSs~Y~TDiAK~i~aPI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GH 480 (957)
T Consensus 173 ~~~~~~~~~~l~~~~~sfG~~v~~vdGhd~~~i~~a~~~a---~~~~~kP~~I~~~T~KGkG~ 232 (255)
T cd02012 173 PTDDILFTEDLAKKFEAFGWNVIEVDGHDVEEILAALEEA---KKSKGKPTLIIAKTIKGKGV 232 (255)
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH---HHCCCCCEEEEEEEEECCCC
T ss_conf 0302547688999999669811101799999999999999---86799958999996511488