HHsearch alignment for GI: 254781051 and conserved domain: pfam02775
>pfam02775 TPP_enzyme_C Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.
Probab=95.89 E-value=0.06 Score=34.46 Aligned_cols=110 Identities=24% Similarity=0.357 Sum_probs=68.8
Q ss_pred CCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCC
Q ss_conf 73100044553236777764166654455565445404788862575333467258876451067744365799984160
Q gi|254781051|r 333 SHLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQ 412 (957)
Q Consensus 333 SHLEaVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQ 412 (957)
T Consensus 28 g~mG~~~p~AiGa~~a~p~----------------~~vi~i~--GDG~f~~~~--~el~Ta~~---~~~-~i~~iv~nN~ 83 (150)
T pfam02775 28 GTMGYGLPAAIGAKLARPD----------------RPVVAIA--GDGGFQMNG--QELATAVR---YNL-PITVVVLNNG 83 (150)
T ss_pred CHHHHHHHHHHHHHHHCCC----------------CEEEEEE--CCCCHHCCC--CHHHHHHH---HCC-CCCEEEEECC
T ss_conf 3232289999999997899----------------8499998--897211134--37999998---488-8568999764
Q ss_pred E-ECCC---CCHH--CCCCCC-------CCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 2-0124---7010--246778-------400112203405874267889999999999999997389739986
Q gi|254781051|r 413 I-GFTT---NPSS--ARSCTY-------ASDISKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDI 472 (957)
Q Consensus 413 I-GFTT---~p~d--~RSs~Y-------~TDiAK~i~aPI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDl 472 (957)
T Consensus 84 ~yg~~~~~q~~~~~~~~~~~~~~~~~~d~~~lA~a~G~~~~~v--~~~~el~~al~~a~----~~~gP~~ieV 150 (150)
T pfam02775 84 GYGMTRGQQTPFGGKRYSGPDGDLPPVDFAKLAEAYGAKGARV--ESPEELEEALKEAL----AHDGPALIDV 150 (150)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEE--CCHHHHHHHHHHHH----HCCCCEEEEC
T ss_conf 2588899988742997456567888878999999859869997--89999999999998----2899989959