HHsearch results for GI: 254781051 and protein with PDBid: 1r9j_A

Probab=97.05  E-value=0.024  Score=35.79  Aligned_cols=204  Identities=14%  Similarity=0.144  Sum_probs=122.7

Q ss_pred             EEECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCC--CCCCCCCCC
Q ss_conf             982431111013432022113865311100002442454102256554202576233368135436888--888876564
Q gi|254781051|r  667 VVNSFLSEQAVLGFEYGYSLNNLNALTIWEAQFGDFANGAQVILDQFITAGEQKWLCTSNLVCLLPHGY--EGQGPEHSS  744 (957)
Q Consensus       667 v~nS~LSE~avlgFEyGys~~~p~~L~iWEAQFGDF~NgAQviiDqfiss~e~KW~~~sglvllLPHGy--eGqGPEHSS  744 (957)
                      .+|...+|.+..++--|+++..  .+.-|-+.|.-|.   |-..||.+-.+   |.+...++...+-|.  -+-||-|-+
T Consensus       404 ~~~~gIaE~~~~~~a~Gla~~~--g~~p~~~~~~~f~---~~~~~~i~~~~---~~~~~~~~~~~~~g~~~g~dG~tHq~  475 (673)
T 1r9j_A          404 YIRFGVREHAMCAILNGLDAHD--GIIPFGGTFLNFI---GYALGAVRLAA---ISHHRVIYVATHDSIGVGEDGPTHQP  475 (673)
T ss_dssp             EEECCSCHHHHHHHHHHHHHHS--SCEEEEEEEGGGG---GGGHHHHHHHH---HHTCCCEEEEECCSGGGCTTCTTTCC
T ss_pred             CCCCCHHHHHHHHHHHHHHHCC--CCCEEEEEEEHHC---CCCCHHHHHHH---HCCCCCEEEEECCCCCCCCCCCCCCC
T ss_conf             2111134557999999999829--9603887311011---22309999876---43577258741464433577644352


Q ss_pred             CCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCCHHHHCCCCCEEECCCCCCCCC
Q ss_conf             40578875214378269724889999999999743534886898566022108012688789379986035157764334
Q gi|254781051|r  745 ARLERFLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLIMMAPKSLLRHKRVVSSLSDMTCGSVFQAVLSDDAEYH  824 (957)
Q Consensus       745 aRlERfLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tPKsLLR~~~a~S~l~d~~~g~~F~~vi~d~~~~~  824 (957)
                      .--  .-.|.+=.||.|+.|+.+.....+++.-+.+....+. +..++.-.. +.-....+.+..|. . .++..     
T Consensus       476 ~~d--~~~lr~iPn~~v~~P~d~~e~~~~~~~~~~~~~~~~~-~~~~r~~~~-~~~~~~~~~~~~G~-~-~~~~~-----  544 (673)
T 1r9j_A          476 VEL--VAALRAMPNLQVIRPSDQTETSGAWAVALSSIHTPTV-LCLSRQNTE-PQSGSSIEGVRHGA-Y-SVVDV-----  544 (673)
T ss_dssp             SSH--HHHHHHSTTCEEECCSSHHHHHHHHHHHHHCTTCCEE-EECCSSEEC-CCTTCCHHHHHTSC-E-EEECC-----
T ss_pred             HHH--HHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCCEE-EECCCCCCC-CCCCCCHHHHCCCC-E-EEEEC-----
T ss_conf             678--8998728994323799999999999986630689513-322777878-76766555651677-8-99987-----


Q ss_pred             CCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHCCC-CCEEEEEEECCCCCHH---HHHHHHHHHCCCC-EEEEECCCCC
Q ss_conf             445444579545768998688578999999997699-8689998401486828---9999998537998-3998067853
Q gi|254781051|r  825 GKTSVKLKEDSHIRRVILCTGKVYYDLLDNRDMRNI-ADIYLLRIEQLYPFPE---DYLIKVLSRFVQA-EIVWCQEEPQ  899 (957)
Q Consensus       825 ~~~~~~~~~~~~v~rvi~csGKvyydL~~~r~~~~~-~~vaivRiEqLyPfP~---~~l~~~l~~y~~~-e~vW~QEEp~  899 (957)
                                +.-+=.|+++|-.....+++-+.... -++.+|-+--+=||..   .-+..++   ++. -+|.+ ||..
T Consensus       545 ----------~~~~v~iia~G~~v~~al~Aa~~L~~~i~~~Vv~~~s~kpld~~~~~~~~~v~---~~~~~vvtv-E~~~  610 (673)
T 1r9j_A          545 ----------PDLQLVIVASGSEVSLAVDAAKALSGELRVRVVSMPCQELFDAQPDTYRQAVL---PAGVPVVSV-EAYV  610 (673)
T ss_dssp             ----------TTCSEEEEECGGGHHHHHHHHHHHTTTCCEEEEECSCHHHHHTSCHHHHHHHS---CTTSCEEEE-CSSC
T ss_pred             ----------CCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHHHHHHH---CCCCCEEEE-ECCC
T ss_conf             ----------99989999750999999999999867898699977877635476899999862---569938999-5993


Q ss_pred             CCCC
Q ss_conf             1784
Q gi|254781051|r  900 NMGA  903 (957)
Q Consensus       900 N~Ga  903 (957)
                      -.|.
T Consensus       611 ~~g~  614 (673)
T 1r9j_A          611 SFGW  614 (673)
T ss_dssp             CTTG
T ss_pred             CCCC
T ss_conf             2255