HHsearch results for GI: 254781051 and protein with PDBid: 1yd7_A
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=95.67 E-value=0.0015 Score=44.92 Aligned_cols=104 Identities=18% Similarity=0.225 Sum_probs=64.3
Q ss_pred HHCCEEEEECCHHHHHHHHHHHHCCCC--CEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHH
Q ss_conf 457689986885789999999976998--689998401486828999999853799839980678531784578997699
Q gi|254781051|r 835 SHIRRVILCTGKVYYDLLDNRDMRNIA--DIYLLRIEQLYPFPEDYLIKVLSRFVQAEIVWCQEEPQNMGAWTFIEPYLE 912 (957)
Q Consensus 835 ~~v~rvi~csGKvyydL~~~r~~~~~~--~vaivRiEqLyPfP~~~l~~~l~~y~~~e~vW~QEEp~N~GaW~~v~~rl~ 912 (957)
++.+-+|+|+|..|....++-+..+.+ +|.++++-.++|||.+.+.+.++++..+= |=|| |.|.. ..-++
T Consensus 290 ~da~~~ii~~Gs~~~~~~~a~~~l~~~g~~v~~~~~~~~~P~p~~~i~~~~~~~k~v~---vvE~--n~g~l---~~~i~ 361 (395)
T 1yd7_A 290 EDAEIGVVATGIVARSALRAVKMLREEGIKAGLLKIETIWPFDFELIERIAERVDKLY---VPEM--NLGQL---YHLIK 361 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEE---EECC--CHHHH---HHHHH
T ss_conf 8861899963602699999999999669974499978027999999999981699899---9708--73199---99999
Q ss_pred HHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 998750567760189753664672338678999999999998719
Q gi|254781051|r 913 KVLHSIGADYSRVRYVGRLPSASTAVGHMSRHLEQLSSFIEDALK 957 (957)
Q Consensus 913 ~~l~~~~~~~~~~~y~gR~~~aspA~G~~~~H~~e~~~li~~a~~ 957 (957)
..+........-.+|-||+..+ .|..+.|++.||
T Consensus 362 ~~~~~~~~~~~i~~~~G~~~~p-----------~ei~~~i~~~~k 395 (395)
T 1yd7_A 362 EGANGKAEVKLISKIGGEVHTP-----------MEIFEFIRREFK 395 (395)
T ss_dssp ---------------------------------------------
T ss_pred HHHCCCCCCEEEECCCCCCCCH-----------HHHHHHHHHHHC
T ss_conf 9738999832895509964899-----------999999999759