HHsearch results for GI: 254781051 and protein with PDBid: 2bfd_A

>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, ketoacid dehydrogenase, branched-chain, multi- enzyme complex, acylation; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=99.96  E-value=3.6e-25  Score=208.42  Aligned_cols=342  Identities=13%  Similarity=0.119  Sum_probs=263.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCE--ECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
Q ss_conf             7888798899999999999998999998640-33622--22564658999999999998737910799806765526899
Q gi|254781051|r  202 FSSNFSKEEQRDILDKLVRAEGFEKFIDIKY-KGAKR--FGADGSEVIIPAIEEIIRQGVQQGVDEMILGMAHRGRLNVL  278 (957)
Q Consensus       202 ~~~~~s~eeK~~iL~~L~~Ae~FE~FL~~Kf-~g~KR--FsLEG~EslIP~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL  278 (957)
                      ..+.+++|+-+.+++.|+.+..||..+..-| -|.=.  .++-|-|+.-.++      ++...-++.++++ ||+.--.|
T Consensus        48 ~~~~ls~e~ll~~yr~M~~~R~~d~~~~~l~rqG~i~~~~~~~GqEA~~vg~------a~aL~~~D~v~~~-yR~~g~~l  120 (400)
T 2bfd_A           48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGS------AAALDNTDLVFGQ-AREAGVLM  120 (400)
T ss_dssp             GCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCCCCCTTCHHHHHHH------HHTSCTTSEEECC-SCCHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHH------HHHCCCCCEEECC-CHHHHHHH
T ss_conf             4799899999999999999999999999998589701461898879999999------9966998988756-11789999


Q ss_pred             HHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCC
Q ss_conf             98853798999998558874322345551001502688983596189997178773100044553236777764166654
Q gi|254781051|r  279 SQIMNKLPRSIFYEFKGKGPSEKEYSGDVKYHLGLCCNRQICGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVG  358 (957)
Q Consensus       279 ~Nvl~Kp~~~iF~EF~g~~~~~~~~sGDVKYHLG~s~~~~~~g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~  358 (957)
                      +.  |.+++.+|+|+-|+......| .+--.|+|.-        +  +.+.+-.|.+-.--|.+.|.+.|.+....    
T Consensus       121 ~r--G~~~~~~~ae~~g~~~g~~~G-r~g~~H~~~~--------~--~~~~~~~~~vg~q~p~AvG~A~a~k~~~~----  183 (400)
T 2bfd_A          121 YR--DYPLELFMAQCYGNISDLGKG-RQMPVHYGCK--------E--RHFVTISSPLATQIPQAVGAAYAAKRANA----  183 (400)
T ss_dssp             HT--TCCHHHHHHHHHTCTTCTTTT-CSCSSCCCBT--------T--TTBCCCCSSTTTHHHHHHHHHHHHHHHTC----
T ss_pred             HC--CCCHHHHHHHHHHCCCCCCCC-CCCEEECCCH--------H--HCCCCCCCHHCCCCCHHHHHHHHHHHCCC----
T ss_conf             82--898999999973005777788-8761203452--------3--16277774031575601137889874378----


Q ss_pred             CCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCCCCCCCHHHHHHCCC
Q ss_conf             45556544540478886257533346725887645106774436579998416020124701024677840011220340
Q gi|254781051|r  359 EKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCTYASDISKSIGIP  438 (957)
Q Consensus       359 ~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RSs~Y~TDiAK~i~aP  438 (957)
                                +-+.|...||+|.+ ||.++|+|||+.+-..   -+|.||.|||.+..|...+..++..-.+.|+.++.|
T Consensus       184 ----------~~v~v~~~GDGa~s-eG~fhEalN~Aa~~~l---Pvifv~eNN~yaistp~~~q~~~~~i~~ra~~yGi~  249 (400)
T 2bfd_A          184 ----------NRVVICYFGEGAAS-EGDAHAGFNFAATLEC---PIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIM  249 (400)
T ss_dssp             ----------CCCEEEEEETTGGG-SHHHHHHHHHHHHTTC---CEEEEEEECSEETTEEGGGTCSSSTTGGGTGGGTCE
T ss_pred             ----------CCCEEEEECCCCCC-CCCHHHHHHHHHHCCC---CEEEEEECCCCCCCCCHHHHHCHHHHHHHCCCCCCC
T ss_conf             ----------87305621687345-4519999999875067---448987237433467604441113453330004565


Q ss_pred             EEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCH-HHHHHHHHCCCHHHHHHHHHHHCCCC
Q ss_conf             58742678899999999999999973897399864211256564354223557-88888671899899999998644898
Q gi|254781051|r  439 IFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEPSFTQP-MMYKTIRSHKSVLQLYADSLMKNQVI  517 (957)
Q Consensus       439 I~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~DeP~fTQP-~mY~~I~~hp~v~~~Y~~~Li~~g~i  517 (957)
                      .++|+|.|++||..+++-|+++-.+-++.++|.++|||..||...|||..--+ .-.+..+++..+...+.+.|+++|++
T Consensus       250 ~~~VDG~D~~av~~a~~~A~~~ar~g~gP~lie~~tyR~~~Hs~sDD~~~YR~~~Ei~~w~~~ddPi~~~~~~L~~~g~~  329 (400)
T 2bfd_A          250 SIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLSQGWW  329 (400)
T ss_dssp             EEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEEEECCCCC--CC-------------------CCHHHHHHHHHTTTTCC
T ss_pred             EEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC
T ss_conf             16762788899999999999865405999899975464788888888534458889999996088999999999986999


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf             98999999999999977566654125-876566665686266677899999999887436899862
Q gi|254781051|r  518 SKQELQSLANNWHKYLEAEYKESESY-CPEKLGLLHNGENERKNSVSKEILKKIGSSIIRLPKSFN  582 (957)
Q Consensus       518 t~~e~~~~~~~~~~~l~~~~~~~k~~-~~~~~~~~~~~~~~~~T~v~~~~L~~i~~~l~~~Pe~f~  582 (957)
                      ++++.+++.++.++.++++++.++.. .|.+...+.+-..+...- -.+.-+++.+.+-+.||...
T Consensus       330 ~~e~~~~i~~e~~~ev~~a~~~A~~~p~P~~~~l~~~VY~~~~~~-l~eq~~~~~~~~~~~~e~y~  394 (400)
T 2bfd_A          330 DEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQ-LRKQQESLARHLQTYGEHYP  394 (400)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHSCBCCGGGGSTTSSSSCCHH-HHHHHHHHHHHHHHHGGGSC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHH-HHHHHHHHHHHHHHCCCCCC
T ss_conf             999999999999999999999998089969899985623699976-99999999999997756588