HHsearch results for GI: 254781051 and protein with PDBid: 2bfd_A
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, ketoacid dehydrogenase, branched-chain, multi- enzyme complex, acylation; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=99.96 E-value=3.6e-25 Score=208.42 Aligned_cols=342 Identities=13% Similarity=0.119 Sum_probs=263.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCE--ECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
Q ss_conf 7888798899999999999998999998640-33622--22564658999999999998737910799806765526899
Q gi|254781051|r 202 FSSNFSKEEQRDILDKLVRAEGFEKFIDIKY-KGAKR--FGADGSEVIIPAIEEIIRQGVQQGVDEMILGMAHRGRLNVL 278 (957)
Q Consensus 202 ~~~~~s~eeK~~iL~~L~~Ae~FE~FL~~Kf-~g~KR--FsLEG~EslIP~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL 278 (957)
..+.+++|+-+.+++.|+.+..||..+..-| -|.=. .++-|-|+.-.++ ++...-++.++++ ||+.--.|
T Consensus 48 ~~~~ls~e~ll~~yr~M~~~R~~d~~~~~l~rqG~i~~~~~~~GqEA~~vg~------a~aL~~~D~v~~~-yR~~g~~l 120 (400)
T 2bfd_A 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGS------AAALDNTDLVFGQ-AREAGVLM 120 (400)
T ss_dssp GCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCCCCCTTCHHHHHHH------HHTSCTTSEEECC-SCCHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHH------HHHCCCCCEEECC-CHHHHHHH
T ss_conf 4799899999999999999999999999998589701461898879999999------9966998988756-11789999
Q ss_pred HHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 98853798999998558874322345551001502688983596189997178773100044553236777764166654
Q gi|254781051|r 279 SQIMNKLPRSIFYEFKGKGPSEKEYSGDVKYHLGLCCNRQICGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVG 358 (957)
Q Consensus 279 ~Nvl~Kp~~~iF~EF~g~~~~~~~~sGDVKYHLG~s~~~~~~g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~ 358 (957)
+. |.+++.+|+|+-|+......| .+--.|+|.- + +.+.+-.|.+-.--|.+.|.+.|.+....
T Consensus 121 ~r--G~~~~~~~ae~~g~~~g~~~G-r~g~~H~~~~--------~--~~~~~~~~~vg~q~p~AvG~A~a~k~~~~---- 183 (400)
T 2bfd_A 121 YR--DYPLELFMAQCYGNISDLGKG-RQMPVHYGCK--------E--RHFVTISSPLATQIPQAVGAAYAAKRANA---- 183 (400)
T ss_dssp HT--TCCHHHHHHHHHTCTTCTTTT-CSCSSCCCBT--------T--TTBCCCCSSTTTHHHHHHHHHHHHHHHTC----
T ss_pred HC--CCCHHHHHHHHHHCCCCCCCC-CCCEEECCCH--------H--HCCCCCCCHHCCCCCHHHHHHHHHHHCCC----
T ss_conf 82--898999999973005777788-8761203452--------3--16277774031575601137889874378----
Q ss_pred CCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCCCCCCCHHHHHHCCC
Q ss_conf 45556544540478886257533346725887645106774436579998416020124701024677840011220340
Q gi|254781051|r 359 EKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCTYASDISKSIGIP 438 (957)
Q Consensus 359 ~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RSs~Y~TDiAK~i~aP 438 (957)
+-+.|...||+|.+ ||.++|+|||+.+-.. -+|.||.|||.+..|...+..++..-.+.|+.++.|
T Consensus 184 ----------~~v~v~~~GDGa~s-eG~fhEalN~Aa~~~l---Pvifv~eNN~yaistp~~~q~~~~~i~~ra~~yGi~ 249 (400)
T 2bfd_A 184 ----------NRVVICYFGEGAAS-EGDAHAGFNFAATLEC---PIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIM 249 (400)
T ss_dssp ----------CCCEEEEEETTGGG-SHHHHHHHHHHHHTTC---CEEEEEEECSEETTEEGGGTCSSSTTGGGTGGGTCE
T ss_pred ----------CCCEEEEECCCCCC-CCCHHHHHHHHHHCCC---CEEEEEECCCCCCCCCHHHHHCHHHHHHHCCCCCCC
T ss_conf ----------87305621687345-4519999999875067---448987237433467604441113453330004565
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCH-HHHHHHHHCCCHHHHHHHHHHHCCCC
Q ss_conf 58742678899999999999999973897399864211256564354223557-88888671899899999998644898
Q gi|254781051|r 439 IFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEPSFTQP-MMYKTIRSHKSVLQLYADSLMKNQVI 517 (957)
Q Consensus 439 I~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~DeP~fTQP-~mY~~I~~hp~v~~~Y~~~Li~~g~i 517 (957)
.++|+|.|++||..+++-|+++-.+-++.++|.++|||..||...|||..--+ .-.+..+++..+...+.+.|+++|++
T Consensus 250 ~~~VDG~D~~av~~a~~~A~~~ar~g~gP~lie~~tyR~~~Hs~sDD~~~YR~~~Ei~~w~~~ddPi~~~~~~L~~~g~~ 329 (400)
T 2bfd_A 250 SIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLSQGWW 329 (400)
T ss_dssp EEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEEEECCCCC--CC-------------------CCHHHHHHHHHTTTTCC
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC
T ss_conf 16762788899999999999865405999899975464788888888534458889999996088999999999986999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 98999999999999977566654125-876566665686266677899999999887436899862
Q gi|254781051|r 518 SKQELQSLANNWHKYLEAEYKESESY-CPEKLGLLHNGENERKNSVSKEILKKIGSSIIRLPKSFN 582 (957)
Q Consensus 518 t~~e~~~~~~~~~~~l~~~~~~~k~~-~~~~~~~~~~~~~~~~T~v~~~~L~~i~~~l~~~Pe~f~ 582 (957)
++++.+++.++.++.++++++.++.. .|.+...+.+-..+...- -.+.-+++.+.+-+.||...
T Consensus 330 ~~e~~~~i~~e~~~ev~~a~~~A~~~p~P~~~~l~~~VY~~~~~~-l~eq~~~~~~~~~~~~e~y~ 394 (400)
T 2bfd_A 330 DEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQ-LRKQQESLARHLQTYGEHYP 394 (400)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHSCBCCGGGGSTTSSSSCCHH-HHHHHHHHHHHHHHHGGGSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHH-HHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999999999999999998089969899985623699976-99999999999997756588