HHsearch results for GI: 254781051 and protein with PDBid: 3l84_A
>3l84_A Transketolase; TKT, structural genomics, center for structural genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=98.66 E-value=3.2e-05 Score=57.51 Aligned_cols=435 Identities=16% Similarity=0.152 Sum_probs=215.8
Q ss_pred CCHHCCHHHHHHHHHHHHHH--CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECC
Q ss_conf 31000445532367777641--6665445556544540478886257533346725887645106774436579998416
Q gi|254781051|r 334 HLEFVDPVVIGSVRARQDLK--AGIVGEKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINN 411 (957)
Q Consensus 334 HLEaVnPVv~G~~RAkQd~~--~d~~~~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNN 411 (957)
||=.-=+++.|.+.|..... .+.. ....+|.+|+ ||+++. .|.++|.||.....+-. --|=|+-||
T Consensus 115 ~lG~gls~A~G~A~a~k~~~~~~~~~-------~~~~~v~~vi--GDG~l~-eG~a~EAln~ag~~~l~--nlivi~D~N 182 (632)
T 3l84_A 115 PLGQGVANAVGFAMAAKKAQNLLGSD-------LIDHKIYCLC--GDGDLQ-EGISYEACSLAGLHKLD--NFILIYDSN 182 (632)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHCTT-------TCCCCEEEEE--EHHHHH-SHHHHHHHHHHHHTTCT--TEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCC-------CCCCEEEEEE--CCCCCC-CCCCHHHHHHHHHHCCC--CEEEEECCC
T ss_conf 64368999999999988875506986-------6786178995--664335-53348899888663367--579996044
Q ss_pred CEECCCCCHHCCCCCC-CCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC--CC
Q ss_conf 0201247010246778-40011220340587426788999999999999999738973998642112565643542--23
Q gi|254781051|r 412 QIGFTTNPSSARSCTY-ASDISKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEP--SF 488 (957)
Q Consensus 412 QIGFTT~p~d~RSs~Y-~TDiAK~i~aPI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~DeP--~f 488 (957)
++--. +.-+-+..+ ....-+..+-.++-|||+|.+++..+.+-| .+..|-++|-.....-+|+-..+.+ ..
T Consensus 183 ~~s~~--~~~~~~~~~~~~~r~~~~g~~v~~vdG~~~~~~~~a~~~a----k~~~kp~~i~~~t~~~~G~~~~eg~~~~h 256 (632)
T 3l84_A 183 NISIE--GDVGLAFNENVKMRFEAQGFEVLSINGHDYEEINKALEQA----KKSTKPCLIIAKTTIAKGAGELEGSHKSH 256 (632)
T ss_dssp SEETT--EEGGGTCCCCHHHHHHHTTCEEEEEETTCHHHHHHHHHHH----HTCSSCEEEEEECCTTTTCGGGTTCGGGS
T ss_pred CCCCC--CCCCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHH----HHCCCCEEEECCCEEECCCHHHCCCCCCC
T ss_conf 22356--7743212347999999719769998897557779999988----74477415642532304827533883314
Q ss_pred CCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH-------HHHCCC-CCCCCCC--CCCCCCC
Q ss_conf 55788888671899899999998644898989999999999999775666-------541258-7656666--5686266
Q gi|254781051|r 489 TQPMMYKTIRSHKSVLQLYADSLMKNQVISKQELQSLANNWHKYLEAEYK-------ESESYC-PEKLGLL--HNGENER 558 (957)
Q Consensus 489 TQP~mY~~I~~hp~v~~~Y~~~Li~~g~it~~e~~~~~~~~~~~l~~~~~-------~~k~~~-~~~~~~~--~~~~~~~ 558 (957)
.-|...+.++ ...+.|...........+...+.+......... ....+. +...... .......
T Consensus 257 ~~~~~~~~~~-------~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (632)
T 3l84_A 257 GAPLGEEVIK-------KAKEQAGFDPNISFHIPQASKIRFESAVELGDLEEAKWKDKLEKSAKKELLERLLNPDFNKIA 329 (632)
T ss_dssp SSCCCHHHHH-------HHHHHHTCCTTCCSCCCHHHHHHHHTHHHHHHHHHHHHHHHHHHSSCHHHHHHHHSCCSTTCC
T ss_pred CCCCCCCHHH-------HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC
T ss_conf 4676541024-------469883886555613536788888889874015654455555555432023311474011101
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
Q ss_conf 67789999999988743689986205677888998998733435642114789888988635831578501002233323
Q gi|254781051|r 559 KNSVSKEILKKIGSSIIRLPKSFNTHKIVERLMANRQKMIETGKGIDWSMAESLAFGSLCYEGYKVRLSGQDCERGTFSH 638 (957)
Q Consensus 559 ~T~v~~~~L~~i~~~l~~~Pe~f~~h~~v~k~~~~R~~~~~~~~~iDW~~AE~LA~~SLl~eG~~VRlsGQD~~RGTFsh 638 (957)
.|. + .+..+....+-.-+..-|...--.+-....|...+|...
T Consensus 330 ------------------~~~-~------------------~~~~~a~r~~~g~~L~~l~~~~~~~~~~~~~~~~~~~~~ 372 (632)
T 3l84_A 330 ------------------YPD-F------------------KGKDLATRDSNGEILNVLAKNLEGFLGGSADLGPSNKTE 372 (632)
T ss_dssp ------------------CCC-C------------------TTCCBCHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCC
T ss_pred ------------------CCC-C------------------CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf ------------------544-3------------------577522799889999999875023201123446643221
Q ss_pred CEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 02799977888445563442789845999824311110134320221138653111000024424541022565542025
Q gi|254781051|r 639 RHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFEYGYSLNNLNALTIWEAQFGDFANGAQVILDQFITAGE 718 (957)
Q Consensus 639 RHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFEyGys~~~p~~L~iWEAQFGDF~NgAQviiDqfiss~e 718 (957)
.+. .....+ ++| +|-..+|.+..+|--|+++.. .+..+-+-|..|. |.+.||....+-
T Consensus 373 ~~~-------------~~~~~p--~R~--~d~GIaE~~~v~~aaGla~~~--~~~~~~~~~~~F~---~~~~~~~~~~~~ 430 (632)
T 3l84_A 373 LHS-------------MGDFVE--GKN--IHFGIREHAMAAINNAFARYG--IFLPFSATFFIFS---EYLKPAARIAAL 430 (632)
T ss_dssp CTT-------------SCBTTT--SSE--EECCSCHHHHHHHHHHHHHHS--SCEEEEEEEGGGH---HHHHHHHHHHHH
T ss_pred CCC-------------CCCCCC--CCC--EECCCHHHHHHHHHHHHHHCC--CCCEEECHHHHHH---HHHHHHHHHHHC
T ss_conf 111-------------355799--871--222600888999899998638--9735563589999---999999863401
Q ss_pred HHHCCCCCCEEECCCCC--CCCCCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHC
Q ss_conf 76233368135436888--8888765644057887521437826972488999999999974353488689856602210
Q gi|254781051|r 719 QKWLCTSNLVCLLPHGY--EGQGPEHSSARLERFLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLIMMAPKSLLR 796 (957)
Q Consensus 719 ~KW~~~sglvllLPHGy--eGqGPEHSSaRlERfLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tPKsLLR 796 (957)
.++. .+++...-|. -+-||-|-+..-.=||. +=.||.|+.|+.+...-.+|+-=+ + ..+|-++..|+.-+.
T Consensus 431 ~~~~---~~~~~~~~g~~vg~dG~THq~~~di~~l~--~iPn~~v~~P~d~~e~~~~l~~al-~-~~~p~~i~~~r~~~~ 503 (632)
T 3l84_A 431 MKIK---HFFIFTHDSIGVGEDGPTHQPIEQLSTFR--AMPNFLTFRPADGVENVKAWQIAL-N-ADIPSAFVLSRQKLK 503 (632)
T ss_dssp HTCC---CEEEEECCSGGGCTTCGGGSCSSHHHHHH--HSSSCEEECCSSHHHHHHHHHHHH-H-CSSCEEEECCSSCBC
T ss_pred CCCC---CEEEEECCCCCCCCCCCCCCCCCHHHHHH--CCCCEEEECCCCHHHHHHHHHHHH-H-CCCCCCCCCCCCCCC
T ss_conf 3555---25999468755455554423201066662--588645545789899999998777-5-058863335678888
Q ss_pred CCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHCCC--CCEEEEEEECCCCC
Q ss_conf 8012688789379986035157764334445444579545768998688578999999997699--86899984014868
Q gi|254781051|r 797 HKRVVSSLSDMTCGSVFQAVLSDDAEYHGKTSVKLKEDSHIRRVILCTGKVYYDLLDNRDMRNI--ADIYLLRIEQLYPF 874 (957)
Q Consensus 797 ~~~a~S~l~d~~~g~~F~~vi~d~~~~~~~~~~~~~~~~~v~rvi~csGKvyydL~~~r~~~~~--~~vaivRiEqLyPf 874 (957)
.-. +. .+..++. ....+.+.+.-+=.|+++|-....-+++.+.... -++.+|-+=.+-||
T Consensus 504 ~~~---------~~-~~~~~~~--------g~~~l~~g~~~~v~iia~G~~v~~al~aa~~L~~~gi~~~Vi~~~~~kpl 565 (632)
T 3l84_A 504 ALN---------EP-VFGDVKN--------GAYLLKESKEAKFTLLASGSEVWLCLESANELEKQGFACNVVSMPCFELF 565 (632)
T ss_dssp CCC---------CC-SBCCGGG--------SSEEEECCTTCSEEEEECGGGHHHHHHHHHHHHHTTCCEEEEECSBHHHH
T ss_pred CCC---------CC-CHHHCCC--------CEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHH
T ss_conf 778---------53-0121267--------31999988999999996669999999999999864999799967988277
Q ss_pred HHH
Q ss_conf 289
Q gi|254781051|r 875 PED 877 (957)
Q Consensus 875 P~~ 877 (957)
-.+
T Consensus 566 d~~ 568 (632)
T 3l84_A 566 EKQ 568 (632)
T ss_dssp HTS
T ss_pred HHC
T ss_conf 653