HHsearch alignment for GI: 254781052 and conserved domain: PRK05352

>PRK05352 Na(+)-translocating NADH-quinone reductase subunit A; Provisional.

Probab=96.46  E-value=0.004  Score=40.13  Aligned_cols=47  Identities=23%  Similarity=0.348  Sum_probs=35.6

Q ss_pred             EEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCE
Q ss_conf             99999982688783489749999527624566678787899997078888
Q gi|254781052|r   35 ATVGTWLKEIGESVEIGEILVELETDKVTVEVPSPVSGKLHEMSVAKGDT   84 (436)
Q Consensus        35 g~Iv~Wlv~~Gd~V~~gd~i~eVETDKa~~evesp~~G~l~~i~v~eGd~   84 (436)
T Consensus        39 gl~pkl~VkeGD~V~~Gq~Lf~dK~~-~~v~~~SPvSG~V~~I~r--G~k   85 (448)
T PRK05352         39 GLKPTMKVKEGDKVKKGQPLFEDKKN-PGVKFTAPASGTVSAINR--GEK   85 (448)
T ss_pred             CCCCCEEECCCCEECCCCEEEECCCC-CCEEEECCCCEEEEEEEC--CCC
T ss_conf             99985685579997479855653898-962696889829952205--887