HHsearch alignment for GI: 254781052 and conserved domain: TIGR02712
>TIGR02712 urea_carbox urea carboxylase; InterPro: IPR014084 Members of this family are ATP-dependent urea carboxylases, including characterised members from Oleomonas sagaranensis (alpha class Proteobacterium) and yeasts such as Saccharomyces cerevisiae (Baker's yeast). The allophanate hydrolase domain of the yeast enzyme is not included in this entry and is represented by an adjacent gene in Oleomonas sagaranensis. The fusion of urea carboxylase and allophanate hydrolase is designated urea amidolyase. The enzyme from O. sagaranensis was shown to be highly active on acetamide and formamide as well as urea..
Probab=98.74 E-value=3.8e-08 Score=73.29 Aligned_cols=78 Identities=29% Similarity=0.394 Sum_probs=66.8
Q ss_pred CCCEEEECCCCCCCC---CEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEECCCEEEE
Q ss_conf 284277768878870---07999999826887834897499995276245666787878999970788885517711899
Q gi|254781052|r 18 SMATKILVPSLGESV---NEATVGTWLKEIGESVEIGEILVELETDKVTVEVPSPVSGKLHEMSVAKGDTVTYGGFLGYI 94 (436)
Q Consensus 18 ~M~~ei~mP~lGe~m---~Eg~Iv~Wlv~~Gd~V~~gd~i~eVETDKa~~evesp~~G~l~~i~v~eGd~v~VG~~i~~i 94 (436)
T Consensus 1146 ~~~~~~~~~~g~~~V~s~~~G~~WK~~V~~G~~V~~G~~l~i~EaMKmE~~v~Ap~~G~V~~i~~~~G~~V~aG~~l~~~ 1225 (1226)
T TIGR02712 1146 APEEEADLPEGAVQVESEVAGNVWKVLVEVGDRVEAGQPLVIIEAMKMEMTVSAPVAGKVTKILCKPGDMVDAGDILVVL 1225 (1226)
T ss_pred CCCCCCCCCCCCEEEEEECEEEEEEEEECCCCEEECCCEEEEEEECCCCEEECCCCCCEEEEEEECCCCCCCCCCEEEEE
T ss_conf 24222436577148985020146566521266320487389994357211243898854889973684822678637874
Q ss_pred E
Q ss_conf 8
Q gi|254781052|r 95 V 95 (436)
Q Consensus 95 ~ 95 (436)
T Consensus 1226 ~ 1226 (1226)
T TIGR02712 1226 E 1226 (1226)
T ss_pred C
T ss_conf 7