HHsearch alignment for GI: 254781052 and conserved domain: TIGR03077
>TIGR03077 not_gcvH glycine cleavage protein H homolog, Chlamydial. The H protein (GcvH) of the glycine cleavage system shuttles the methylamine group of glycine from the P protein to the T protein. Most Chlamydia but lack the P and T proteins, and have a single homolog of GcvH that appears deeply split from canonical GcvH in molecular phylogenetic trees. The protein family modeled here is observed the Chlamydial GcvH homolog, so far always seen as part of a two-gene operon, downstream of a member of the uncharacterized protein family TIGR03076. The function of this protein is unknown.
Probab=97.47 E-value=0.00014 Score=49.70 Aligned_cols=45 Identities=42% Similarity=0.580 Sum_probs=39.1
Q ss_pred EEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEEC
Q ss_conf 9999998268878348974999952762456667878789999707
Q gi|254781052|r 35 ATVGTWLKEIGESVEIGEILVELETDKVTVEVPSPVSGKLHEMSVA 80 (436)
Q Consensus 35 g~Iv~Wlv~~Gd~V~~gd~i~eVETDKa~~evesp~~G~l~~i~v~ 80 (436)
T Consensus 32 I~~v~-lp~~G~~v~~g~~~~~vEs~K~~~~i~sPvsG~VvevN~~ 76 (110)
T TIGR03077 32 ILHID-LPSVGSSCKEGEVLVILESSKSAIEVLSPVSGEVIEVNIA 76 (110)
T ss_pred EEEEE-CCCCCCEEECCCEEEEEEECEEEECCCCCCCEEEEEEHHH
T ss_conf 89997-7899998857985999996516120207876699986684