HHsearch alignment for GI: 254781052 and conserved domain: cd06848
>cd06848 GCS_H Glycine cleavage H-protein. Glycine cleavage H-proteins are part of the glycine cleavage system (GCS) found in bacteria, archea and the mitochondria of eukaryotes. GCS is a multienzyme complex consisting of 4 different components (P-, H-, T- and L-proteins) which catalyzes the oxidative cleavage of glycine. The H-protein shuttles the methylamine group of glycine from the P-protein (glycine dehydrogenase) to the T-protein (aminomethyltransferase) via a lipoyl group, attached to a completely conserved lysine residue.
Probab=97.36 E-value=0.00032 Score=47.36 Aligned_cols=45 Identities=31% Similarity=0.436 Sum_probs=38.3
Q ss_pred EEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEEC
Q ss_conf 9999998268878348974999952762456667878789999707
Q gi|254781052|r 35 ATVGTWLKEIGESVEIGEILVELETDKVTVEVPSPVSGKLHEMSVA 80 (436)
Q Consensus 35 g~Iv~Wlv~~Gd~V~~gd~i~eVETDKa~~evesp~~G~l~~i~v~ 80 (436)
T Consensus 31 i~~v~-lp~~g~~v~~g~~~~~iEs~k~~~~i~sPv~G~vv~~N~~ 75 (96)
T cd06848 31 IVFVE-LPEVGTEVKKGDPFGSVESVKAASDLYSPVSGEVVEVNEA 75 (96)
T ss_pred EEEEE-CCCCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEEEHHH
T ss_conf 89999-1799970138985999996335788737716699983796