HHsearch alignment for GI: 254781052 and conserved domain: pfam00302
>pfam00302 CAT Chloramphenicol acetyltransferase.
Probab=99.03 E-value=3.6e-09 Score=80.04 Aligned_cols=175 Identities=13% Similarity=0.106 Sum_probs=123.0
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCEEEEECCCCCEEEEEC
Q ss_conf 0122232222233211343454444320023111243210122221011468654312356-833573036654157716
Q gi|254781052|r 229 TAAILSTYNEVNMSRIISIRSRYKDIFEKKHGIKLGFMGFFTKAASHVLQEIKGVNAEIDG-DHIVYKNYCHIGVAVGTD 307 (436)
Q Consensus 229 tiP~~t~~~evd~t~l~~~r~~l~~~~~~~~g~klt~~~~likA~a~Al~~~P~lNa~~~~-~~i~~~~~vnigiAv~~~ 307 (436)
T Consensus 24 ~~p~~siT~~vDvT~l~~~~K~~----------~~sF~~~~ly~v~kavN~~~efr~ri~~dg~vv~~d~i~ps~Ti~~~ 93 (206)
T pfam00302 24 VPCTYSMTVKLDITALLKALKEK----------GYKFYPALIYLIARVVNRHPEFRMALNDDGELGYWDSVNPSYTVFHK 93 (206)
T ss_pred CCCEEEEEEEEEHHHHHHHHHHC----------CCCHHHHHHHHHHHHHHCCHHHHEEEECCCEEEEEEEECEEEEEEEC
T ss_conf 99779999888899999999982----------99817999999999985586561688389849998674205578847
Q ss_pred C-CCCCCEEECCCCCCHHHHHHHHHHHHCCCCC-CCCCCC-CCCCCEEEEECCCCCCCCEEC-CCCCCCC--EEEEEECC
Q ss_conf 8-7211135134325989999987653101222-235720-025840888615232621011-2015887--07898435
Q gi|254781052|r 308 K-GLVVPVIRHADKMNIVEIEREIARLGREARA-GHLSMR-DLQNGTFTISNGGVYGSLLSS-PILNPPQ--SGILGMHK 381 (436)
Q Consensus 308 ~-GL~vPVI~~a~~~~l~~i~~~~~~l~~~ar~-~~l~~~-el~ggt~tiSNlG~~G~~~~~-piI~ppq--~aIl~vg~ 381 (436)
T Consensus 94 d~~tFs~~~-~~y~~df~~F~~~~~~~~~~~~~~~~~~~~~~~~~n~~~iS~lPW~~Ft~~~~~~~~~~~~~~P~it~GK 172 (206)
T pfam00302 94 ETETFSSLW-TEYDPDFTQFYDNYLSDIAEYGDDTKLFPKGNPPENTFNVSSIPWVSFTGFNLNIANGSDYLAPIFTMGK 172 (206)
T ss_pred CCCEEEEEE-ECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 996399999-5267879999999999999863245756689998888997312122555554565679877586699724
Q ss_pred CEEEEEEECCEEEEEEEEEEEEEEEEEEEEHHHHHHHHHHH
Q ss_conf 13567888895789548899997310114028899999999
Q gi|254781052|r 382 IQERPIVEDGQIVIRPMMYLALSYDHRIVDGKEAVTFLVRL 422 (436)
Q Consensus 382 i~~~~v~~~g~~~~~~~~~ltls~DHRvidGa~aa~Fl~~l 422 (436)
T Consensus 173 y~~~----~g----r~~mPvsvqvhHa~~DG~Hv~~F~~~l 205 (206)
T pfam00302 173 YYQE----GN----KILLPLSIQVHHAVCDGFHAGRFINEL 205 (206)
T ss_pred EEEE----CC----EEEEEEEEEEEECCCCHHHHHHHHHHH
T ss_conf 7988----99----999989999962001619999999974