HHsearch results for GI: 254781052 and protein with PDBid: 3l60_A
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=0 Score=496.46 Aligned_cols=226 Identities=28% Similarity=0.480 Sum_probs=218.0
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 53101233100000000012110012223222223321134345444432002311124321012222101146865431
Q gi|254781052|r 206 SEERVKMSRLRQTVAKRLKDAQNTAAILSTYNEVNMSRIISIRSRYKDIFEKKHGIKLGFMGFFTKAASHVLQEIKGVNA 285 (436)
Q Consensus 206 ~~~~vpls~mRk~IA~~m~~S~~tiP~~t~~~evd~t~l~~~r~~l~~~~~~~~g~klt~~~~likA~a~Al~~~P~lNa 285 (436)
+.+.+|+++|||+||++|++||+++||||++.|+|+|+++++|+++++ .|.|+|+++|++||+++||++||.+|+
T Consensus 13 ~~~~~pl~~~r~~ia~~m~~S~~~iPh~~~~~evd~t~l~~~r~~~~~-----~~~k~s~~~~~ikA~~~aL~~~P~~N~ 87 (250)
T 3l60_A 13 GPDVRPVHGVHARMAEKMTLSHKEIPTAKASVEVICAELLRLRDRFVS-----AAPEITPFALTLRLLVIALKHNVILNS 87 (250)
T ss_dssp -CCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEECHHHHHHHHHHTT-----TCTTCCHHHHHHHHHHHHHHHCGGGSE
T ss_pred CCCEEECHHHHHHHHHHHHHHHHHCCEEEEEEEEEHHHHHHHHHHHHH-----HCCCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 974307659999999999998861997999999876999999898765-----255553115379999999984842377
Q ss_pred CCCC----CCEEEEECCCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 2356----833573036654157716872111351343259899999876531012222357200258408886152326
Q gi|254781052|r 286 EIDG----DHIVYKNYCHIGVAVGTDKGLVVPVIRHADKMNIVEIEREIARLGREARAGHLSMRDLQNGTFTISNGGVYG 361 (436)
Q Consensus 286 ~~~~----~~i~~~~~vnigiAv~~~~GL~vPVI~~a~~~~l~~i~~~~~~l~~~ar~~~l~~~el~ggt~tiSNlG~~G 361 (436)
+|++ +.+++++++||||||++++||+||||++||++++.+|++++++|+++||+|+|+++|++||||||||+|+||
T Consensus 88 ~~~~~~~~~~i~~~~~vnIgvAv~~~~GL~vPvI~~a~~~sl~eia~~~~~l~~~ar~~~L~~~d~~ggtftisnlG~~g 167 (250)
T 3l60_A 88 TWVDSGEGPQVHVHRGVHLGFGAATERGLLVPVVTDAQDKNTRELASRVAELITGAREGTLTPAELRGSTFTVSNFGALG 167 (250)
T ss_dssp EEECTTTSCEEEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCGGGGSCCSEEEECGGGGT
T ss_pred CEEECCCCCEEEEECCEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC
T ss_conf 26523688669997544320444678966983581775489999999889999998728978201488339998788877
Q ss_pred CCEECCCCCCCCEEEEEECCCEEEEEEECCEEEEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHCCHHHHHHCC
Q ss_conf 210112015887078984351356788889578954889999731011402889999999999970989887359
Q gi|254781052|r 362 SLLSSPILNPPQSGILGMHKIQERPIVEDGQIVIRPMMYLALSYDHRIVDGKEAVTFLVRLKELLEDPERFILDL 436 (436)
Q Consensus 362 ~~~~~piI~ppq~aIl~vg~i~~~~v~~~g~~~~~~~~~ltls~DHRvidGa~aa~Fl~~l~~~le~P~~ll~~~ 436 (436)
+.+|+|||||||+||||+|+++++|++.+|++.+|++|+||||||||+|||++||+||+.|+++||||+.|||||
T Consensus 168 ~~~~tpii~ppq~aIl~vG~i~~~pv~~~g~i~~r~~m~lslt~DHRviDGa~aa~FL~~lk~~LE~P~~lLl~~ 242 (250)
T 3l60_A 168 VDDGVPVINHPEAAILGLGAIKPRPVVVGGEVVARPTMTLTCVFDHRVVDGAQVAQFMCELRDLIESPETALLDL 242 (250)
T ss_dssp CSSCCCCCCTTCSEEEEECCCEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHSHHHHTTTC
T ss_pred CCEEEECCCCCCCEEEECCCCCEEEEEECCEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHHHC
T ss_conf 341784146996338741565247788899889978999988852522162999999999999971999999755