HHsearch alignment for GI: 254781053 and conserved domain: COG0493

>COG0493 GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only].

Probab=97.81  E-value=1.8e-05  Score=58.33  Aligned_cols=89  Identities=31%  Similarity=0.500  Sum_probs=66.5

Q ss_pred             CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCC-------C--CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf             3321012344543320132201220111000011122-------1--222211222222222222232200234420146
Q gi|254781053|r  175 KNLLVIGAGVIGLELGSVWTRLGSCVKIIEHSGTILN-------G--MDKEIAAHCLKIMSKQGMNFQLNSKVSSVKKVK  245 (466)
Q Consensus       175 ~~ivIIGgG~ig~E~A~~~~~lG~~Vtli~~~~~ll~-------~--~d~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~  245 (466)
T Consensus       124 ~~VaviGaGPAGl~~a~~L~~~G~~Vtv~e~~~~~GGll~yGIP~~kl~k~i~d~~i~~l~~~Gv~~~~~~~vG~----~  199 (457)
T COG0493         124 KKVAVIGAGPAGLAAADDLSRAGHDVTVFERVALDGGLLLYGIPDFKLPKDILDRRLELLERSGVEFKLNVRVGR----D  199 (457)
T ss_pred             CEEEEECCCCHHHHCHHHHHHCCCEEEECCCCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHCCCEEEECCEECC----C
T ss_conf             679998889515558899986898799826667774479814844646420689999999874909998667799----6


Q ss_pred             CCCEEEEEEECCCCCCCEEEEEEECCCC-EEE
Q ss_conf             8721699972133211000002320453-121
Q gi|254781053|r  246 GKAQVVYRSTDDEPINIEADAVLVAAGR-RPY  276 (466)
Q Consensus       246 ~~~~v~~~~~~g~~~~i~~D~vl~a~G~-~Pn  276 (466)
T Consensus       200 ----it~-----~~L~~e~Dav~l~~G~~~~~  222 (457)
T COG0493         200 ----ITL-----EELLKEYDAVFLATGAGKPR  222 (457)
T ss_pred             ----CCH-----HHHHHHHCEEEEECCCCCCC
T ss_conf             ----789-----99865328799932667887