HHsearch alignment for GI: 254781053 and conserved domain: COG1148
>COG1148 HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion].
Probab=99.64 E-value=1.8e-16 Score=138.38 Aligned_cols=321 Identities=20% Similarity=0.263 Sum_probs=156.2
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECC-CCHH---------HHHHHHH-----HH--H---HHH
Q ss_conf 1999989866899999999879939999379971502513667-3709---------8999999-----99--9---999
Q gi|254781053|r 4 DVAVVGGGPAGYACAIKAAQLKNKVAIIEKEKTYGGTCLNIGC-IPSK---------ALLHASE-----MY--S---HIA 63 (466)
Q Consensus 4 DvvIIG~G~AG~~aA~~~~~~G~~V~lIE~~~~~GGtC~~~GC-iPsK---------~l~~~a~-----~~--~---~~~ 63 (466)
T Consensus 126 svLVIGGGvAGitAAl~La~~G~~v~LVEKepsiGGrmak~~k~FP~~dcs~C~LaP~m~~v~~hp~i~l~TyaeV~ev~ 205 (622)
T COG1148 126 SVLVIGGGVAGITAALELADMGFKVYLVEKEPSIGGRMAKLNKTFPTNDCSICILAPKMVEVSNHPNIELITYAEVEEVS 205 (622)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCHHHCCCHHHHHCCCCCEEEEEEEEEEEEC
T ss_conf 35998684898999999997598089994178645047765230787553232133023331258861465422465303
Q ss_pred HHHHHCCEECCC-C-CCC--------------------HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE----EE-EE
Q ss_conf 866755816477-5-328--------------------999999999999987777787640043101100----11-10
Q gi|254781053|r 64 KEAGDLGINIAS-C-HLD--------------------LKKMMSYKKSIVESNTQGINFLLKKNKIITYHG----SA-RI 116 (466)
Q Consensus 64 ~~~~~~g~~~~~-~-~~d--------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~V~~~~g----~a-~~ 116 (466)
T Consensus 206 G~vGnF~vki~kkpryVdd~CtgCg~C~~vCPve~~nefn~Gl~~~kAiy~p~~q---aVp~~~~Id~~~c~~c~~C~~a 282 (622)
T COG1148 206 GSVGNFTVKIEKKPRYVDDKCTGCGACSEVCPVEVPNEFNEGLGKRKAIYIPFPQ---AVPLNYNIDPKHCIECGLCEKA 282 (622)
T ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHH---HCCCCCCCCHHHHCCCHHHHHC
T ss_conf 5435347887306520011265532222347765675101254532356425645---5254532171650210356643
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC--CCCEEEEEECCCCC----------------CCCCCCCCC
Q ss_conf 022210235752112322100004676652444576653--21002453057411----------------111133321
Q gi|254781053|r 117 VSNNKILVKGSSSEETIEAKNIVIATGSEASGLPGMSID--FDEQVIVSSTGALS----------------FSSVPKNLL 178 (466)
Q Consensus 117 ~~~~~v~V~~~~~~~~i~ad~iviATGs~p~~iP~~~~~--~~~~~~~t~~~~~~----------------l~~~P~~iv 178 (466)
T Consensus 283 c~~~av~~~q~~e~ve~~vGaIIvAtGy~~~Da~~k~EyGYG~~~nVIT~lElErml~~~GPT~GkvlrpSdg~~PkrVa 362 (622)
T COG1148 283 CPNEAVDLNQEPEEVELEVGAIIVATGYKPFDATRKEEYGYGKYPNVITNLELERMLNPNGPTGGKVLRPSDGKPPKRVA 362 (622)
T ss_pred CCCCCCCCCCCCCEEEEEECEEEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEE
T ss_conf 99300013788717999715299972465557100433388877444447899987355799886177137999874689
Q ss_pred CC---CCCC--CCCCCC----HHH--------HHC--CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 01---2344--543320----132--------201--2201110000111221222211222222222222232200234
Q gi|254781053|r 179 VI---GAGV--IGLELG----SVW--------TRL--GSCVKIIEHSGTILNGMDKEIAAHCLKIMSKQGMNFQLNSKVS 239 (466)
Q Consensus 179 II---GgG~--ig~E~A----~~~--------~~l--G~~Vtli~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~ 239 (466)
T Consensus 363 FIqCVGSRD~~~~n~YCSrvCCm~slKqA~~Iker~Pd~~v~I~YmDiRafG~~---yEefY~~~Q~~~GV~fIRG-rva 438 (622)
T COG1148 363 FIQCVGSRDFQVGNPYCSRVCCMVSLKQAQLIKERYPDTDVTIYYMDIRAFGKD---YEEFYVRSQEDYGVRFIRG-RVA 438 (622)
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC---HHHHHHHHHHHHCCEEECC-CEE
T ss_conf 999614656666882244899999987789988758985389999971246642---6999998788608536646-410
Q ss_pred HHHCCCCCC-EEEEEEE-CCCCCCCEEEEEEECCCCEEEECCCCC-EEEECCCCCCCCCCCC-CCC---EEECCCCEEEC
Q ss_conf 420146872-1699972-133211000002320453121036784-0000126764223337-763---33026848702
Q gi|254781053|r 240 SVKKVKGKA-QVVYRST-DDEPINIEADAVLVAAGRRPYTKGLGL-EEIGINIDHRGCIEIG-GQF---QTSISTIYAIG 312 (466)
Q Consensus 240 ~i~~~~~~~-~v~~~~~-~g~~~~i~~D~vl~a~G~~Pn~~~l~L-e~~gi~~~~~G~I~vd-~~~---~Ts~p~IyA~G 312 (466)
T Consensus 439 eI~e~p~~~liV~~EdTl~g~~~e~~~DLVVLa~Gmep~~g~~kia~iLgL~~~~~gF~k~~hPkl~pv~s~~~GIflAG 518 (622)
T COG1148 439 EIAEFPKKKLIVRVEDTLTGEVKEIEADLVVLATGMEPSEGAKKIAKILGLSQDEDGFLKEAHPKLRPVDSNRDGIFLAG 518 (622)
T ss_pred EEEECCCCCEEEEEEECCCCCEECCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 16887998369998603467311123337999504445765688887548651787760347877664555678579810
Q ss_pred CCCCCCCCCCEECCCCCCEE
Q ss_conf 43335434430001232012
Q gi|254781053|r 313 DVVRGPMLAHKAEDEGIAVA 332 (466)
Q Consensus 313 Dv~g~~~l~~~A~~~g~~aa 332 (466)
T Consensus 519 ~aqgPkdI~-~siaqa~aAA 537 (622)
T COG1148 519 AAQGPKDIA-DSIAQAKAAA 537 (622)
T ss_pred CCCCCCCHH-HHHHHHHHHH
T ss_conf 036984277-8887767889