HHsearch alignment for GI: 254781053 and conserved domain: COG2072
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].
Probab=99.62 E-value=6.7e-16 Score=134.24 Aligned_cols=195 Identities=23% Similarity=0.291 Sum_probs=107.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCC-EEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCH
Q ss_conf 33199998986689999999987993-99993799715025136673709899999999999986675581647753289
Q gi|254781053|r 2 VYDVAVVGGGPAGYACAIKAAQLKNK-VAIIEKEKTYGGTCLNIGCIPSKALLHASEMYSHIAKEAGDLGINIASCHLDL 80 (466)
Q Consensus 2 ~YDvvIIG~G~AG~~aA~~~~~~G~~-V~lIE~~~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~~g~~~~~~~~d~ 80 (466)
T Consensus 8 ~~~v~IIGaG~sGlaaa~~L~~~g~~~~~i~Ek~~~~Gg~-W~~~ry~~l~~~~p~~~~-----~~~~~p~~~~~~~~~~ 81 (443)
T COG2072 8 HTDVAIIGAGQSGLAAAYALKQAGVPDFVIFEKRDDVGGT-WRYNRYPGLRLDSPKWLL-----GFPFLPFRWDEAFAPF 81 (443)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-CCCCCCCEEEECCCCCCC-----CCCCCCCCCCCCCCCC
T ss_conf 5548998987889999999997599867999705766786-555668716767974011-----5888887765567776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCC-CCCCCCCCCCCC-CCCEEECCCCCC--CCC--CCCCCCC
Q ss_conf 9999999999998777778764004310110011100222-102357521123-221000046766--524--4457665
Q gi|254781053|r 81 KKMMSYKKSIVESNTQGINFLLKKNKIITYHGSARIVSNN-KILVKGSSSEET-IEAKNIVIATGS--EAS--GLPGMSI 154 (466)
Q Consensus 81 ~~~~~~~~~~v~~~~~~~~~~~~~~~V~~~~g~a~~~~~~-~v~V~~~~~~~~-i~ad~iviATGs--~p~--~iP~~~~ 154 (466)
T Consensus 82 ~~~~~y~~~~~~~y~~~~~-i~~~~~v~~----~~~~~~~~~w~V~~~~~~~~~~~a~~vV~ATG~~~~P~iP~~~G~~- 155 (443)
T COG2072 82 AEIKDYIKDYLEKYGLRFQ-IRFNTRVEV----ADWDEDTKRWTVTTSDGGTGELTADFVVVATGHLSEPYIPDFAGLD- 155 (443)
T ss_pred CCHHHHHHHHHHHHCCEEE-EECCCCEEE----EEEECCCCEEEEEECCCCCCEEECCEEEECCCCCCCCCCCCCCCCC-
T ss_conf 4389999999998356045-021452568----8630588706999648875225126799830578989788878866-
Q ss_pred CCCCEEEEEECCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCC
Q ss_conf 321002453057411-1111333210123445433201322012201110000111
Q gi|254781053|r 155 DFDEQVIVSSTGALS-FSSVPKNLLVIGAGVIGLELGSVWTRLGSCVKIIEHSGTI 209 (466)
Q Consensus 155 ~~~~~~~~t~~~~~~-l~~~P~~ivIIGgG~ig~E~A~~~~~lG~~Vtli~~~~~l 209 (466)
T Consensus 156 ~f~g~-~~HS~~~~~~~~~~GKrV~VIG~GaSA~di~~~l~~~ga~vt~~qRs~~~ 210 (443)
T COG2072 156 EFKGR-ILHSADWPNPEDLRGKRVLVIGAGASAVDIAPELAEVGASVTLSQRSPPH 210 (443)
T ss_pred CCCCC-EECCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf 66863-44410169613427887999898703999999997306717898517975