HHsearch alignment for GI: 254781053 and conserved domain: KOG0399

Probab=97.56  E-value=3.2e-05  Score=56.55  Aligned_cols=87  Identities=25%  Similarity=0.485  Sum_probs=65.9

Q ss_pred             CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCC-------C--CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf             3321012344543320132201220111000011122-------1--222211222222222222232200234420146
Q gi|254781053|r  175 KNLLVIGAGVIGLELGSVWTRLGSCVKIIEHSGTILN-------G--MDKEIAAHCLKIMSKQGMNFQLNSKVSSVKKVK  245 (466)
Q Consensus       175 ~~ivIIGgG~ig~E~A~~~~~lG~~Vtli~~~~~ll~-------~--~d~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~~  245 (466)
T Consensus      1786 ~~vaiigsgpaglaaadqlnk~gh~v~vyer~dr~ggll~ygipnmkldk~vv~rrv~ll~~egi~f~tn~eigk~---- 1861 (2142)
T KOG0399        1786 KRVAIIGSGPAGLAAADQLNKAGHTVTVYERSDRVGGLLMYGIPNMKLDKFVVQRRVDLLEQEGIRFVTNTEIGKH---- 1861 (2142)
T ss_pred             CEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCC----
T ss_conf             4799974684146689998644767999971577674566168752132799999999988618548850322565----


Q ss_pred             CCCEEEEEEECCCCCCCEEEEEEECCCCE
Q ss_conf             87216999721332110000023204531
Q gi|254781053|r  246 GKAQVVYRSTDDEPINIEADAVLVAAGRR  274 (466)
Q Consensus       246 ~~~~v~~~~~~g~~~~i~~D~vl~a~G~~  274 (466)
T Consensus      1862 ----vs~---d--~l~~~~daiv~a~gst 1881 (2142)
T KOG0399        1862 ----VSL---D--ELKKENDAIVLATGST 1881 (2142)
T ss_pred             ----CCH---H--HHHHCCCEEEEEECCC
T ss_conf             ----567---8--8753057599982788