HHsearch alignment for GI: 254781053 and conserved domain: PRK04965
>PRK04965 nitric oxide reductase; Provisional.
Probab=100.00 E-value=0 Score=356.19 Aligned_cols=356 Identities=20% Similarity=0.280 Sum_probs=250.1
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC--CEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCC
Q ss_conf 93319999898668999999998799--3999937997150251366737098999999999999866755816477532
Q gi|254781053|r 1 MVYDVAVVGGGPAGYACAIKAAQLKN--KVAIIEKEKTYGGTCLNIGCIPSKALLHASEMYSHIAKEAGDLGINIASCHL 78 (466)
Q Consensus 1 M~YDvvIIG~G~AG~~aA~~~~~~G~--~V~lIE~~~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~~g~~~~~~~~ 78 (466)
T Consensus 1 M~~~IVIIG~G~AG~~aa~~lR~~d~~~~Itvi~~e~~~----~Y~rp~Ls~~~~~---------------~----~--- 54 (378)
T PRK04965 1 MSNGIVIIGSGFAARQLVKNIRKQDAHIPITLITADSGD----EYNKPDLSHVFSQ---------------G----Q--- 54 (378)
T ss_pred CCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCC----CCCCCCCHHHHCC---------------C----C---
T ss_conf 989999998829999999999711949869999899998----8767816698828---------------9----9---
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE-EEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 89999999999999877777876400431011001-11002221023575211232210000467665244457665321
Q gi|254781053|r 79 DLKKMMSYKKSIVESNTQGINFLLKKNKIITYHGS-ARIVSNNKILVKGSSSEETIEAKNIVIATGSEASGLPGMSIDFD 157 (466)
Q Consensus 79 d~~~~~~~~~~~v~~~~~~~~~~~~~~~V~~~~g~-a~~~~~~~v~V~~~~~~~~i~ad~iviATGs~p~~iP~~~~~~~ 157 (466)
T Consensus 55 ~~~~l~~----------~~~~~~~~~~~I~l~~~~~V~~ID~~~k~V~~~--g~~~~YDkLVLATGa~p~~ppi~G---~ 119 (378)
T PRK04965 55 RADDLTR----------QSAGEFAEQFNLRLFPHTWVTDIDAEAQVVKSQ--GNQWQYDKLVLATGASAFVPPVPG---R 119 (378)
T ss_pred CHHHHHC----------CCHHHHHHHCCEEEECCCEEEEECCCCCEEEEC--CCEEECCEEEEECCCCCCCCCCCC---C
T ss_conf 9689531----------798999874897998698999984646379958--919846879993588755789999---6
Q ss_pred CEEEEEECCCCC---CC---CCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCCC-CCCCCCCCCCCCCCCCCC
Q ss_conf 002453057411---11---11333210123445433201322012201110000111221-222211222222222222
Q gi|254781053|r 158 EQVIVSSTGALS---FS---SVPKNLLVIGAGVIGLELGSVWTRLGSCVKIIEHSGTILNG-MDKEIAAHCLKIMSKQGM 230 (466)
Q Consensus 158 ~~~~~t~~~~~~---l~---~~P~~ivIIGgG~ig~E~A~~~~~lG~~Vtli~~~~~ll~~-~d~~~~~~~~~~l~~~gV 230 (466)
T Consensus 120 -~~v~tlr~l~d~~~~~~~l~~~krvvVIGgG~IG~E~A~~L~~~G~~Vtvve~~~~ll~~~l~~~~~~~l~~~l~~~GV 198 (378)
T PRK04965 120 -ELMLTLNSQQEYRACETQLRDAQRVLVVGGGLIGTELAMDLCRAGKAVTLVDNAASLLASLMPPEVSSRLQHRLTEMGV 198 (378)
T ss_pred -EEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCE
T ss_conf -4799819999999999775149789998983889999999996798899976667442211789999999999997890
Q ss_pred CCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEECCCCCCCCCCCCCCCEEECCCCEE
Q ss_conf 23220023442014687216999721332110000023204531210367840000126764223337763330268487
Q gi|254781053|r 231 NFQLNSKVSSVKKVKGKAQVVYRSTDDEPINIEADAVLVAAGRRPYTKGLGLEEIGINIDHRGCIEIGGQFQTSISTIYA 310 (466)
Q Consensus 231 ~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vl~a~G~~Pn~~~l~Le~~gi~~~~~G~I~vd~~~~Ts~p~IyA 310 (466)
T Consensus 199 ~~~~~~~v~~i~~~~~~~~v~l~d--G--~~i~aD~Vv~a~Gv~Pnt~l--a~~aGl~~~-~G-I~Vd~~l~TS~p~IyA 270 (378)
T PRK04965 199 HLLLKSQLQGLEKTESGIRATLDD--G--RSIEVDAVIAAAGLRPNTAL--ARRAGLAVN-RG-ICVDSYLQTSAPDIYA 270 (378)
T ss_pred EEEECCEEEEEEECCCEEEEEECC--C--CEEECCEEEECCCCCCCHHH--HHHCCCCCC-CC-EEECCCCCCCCCCEEE
T ss_conf 999698899999659989999859--9--79984999989477548278--986698669-98-8999998549999999
Q ss_pred ECCCCCC----CCCCCEECCCCCCEEECCCCCCCCCCCCCCCCCEEE-HHHHHHHHHCHHHHHHCCCCEEEEEEEECCCC
Q ss_conf 0243335----434430001232012011122222223333221000-14455100147888623466589999604470
Q gi|254781053|r 311 IGDVVRG----PMLAHKAEDEGIAVAEIISGQKGHVNYGIIPSVVYT-HPEVASIGKTEEQLKCEKKSYKVGKFPFSANG 385 (466)
Q Consensus 311 ~GDv~g~----~~l~~~A~~~g~~aa~~i~~~~~~~~~~~ip~~vft-~peia~vGlte~~a~~~~~~~~v~~~~~~~~~ 385 (466)
T Consensus 271 ~GDcAe~~g~~~~~v~p~~~~a~~lA~~l~G~~~~~~~~~~~~~~K~~~~~i~~~g~~~~~------~-----------~ 333 (378)
T PRK04965 271 LGDCAEINGQVLPFLQPIQLSANALAKNLLGQNTPLKLPAMLVKVKTPELPLQLAGETQRQ------D-----------L 333 (378)
T ss_pred EEEEEEECCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEECCCCCCC------C-----------C
T ss_conf 8752898999750289999999999997079985310487358985068512864788899------8-----------4
Q ss_pred HHHHCCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHH
Q ss_conf 344188983389999978998699999982998899999
Q gi|254781053|r 386 RARSMNSIDGFVKILANEKSDRVEGVHIIGGSAGEMIHE 424 (466)
Q Consensus 386 ra~~~~~~~g~~kli~~~~~~~ilG~~~vg~~a~eli~~ 424 (466)
T Consensus 334 ~~~~~~~~~g~~~~~~~~-~g~l~G~vl~Gd~~~~~~~l 371 (378)
T PRK04965 334 RWQINAESQGMVAKAFDE-AGQLRGFVVSEDRMKEAFPL 371 (378)
T ss_pred EEEEEECCCCEEEEEECC-CCCEEEEEEECHHHHHHHHH
T ss_conf 399995599808999946-99699999978888877788