HHsearch alignment for GI: 254781053 and conserved domain: PRK08020
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed.
Probab=97.56 E-value=7.8e-06 Score=60.97 Aligned_cols=136 Identities=21% Similarity=0.261 Sum_probs=68.5
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCC--E--------EEEEECCCCHHHHHHHHHHHHHHHHH-HHHC-C
Q ss_conf 319999898668999999998799399993799715--0--------25136673709899999999999986-6755-8
Q gi|254781053|r 3 YDVAVVGGGPAGYACAIKAAQLKNKVAIIEKEKTYG--G--------TCLNIGCIPSKALLHASEMYSHIAKE-AGDL-G 70 (466)
Q Consensus 3 YDvvIIG~G~AG~~aA~~~~~~G~~V~lIE~~~~~G--G--------tC~~~GCiPsK~l~~~a~~~~~~~~~-~~~~-g 70 (466)
T Consensus 6 ~DV~IvG~G~vGl~lAl~La~~G~~V~viE~~~~~~~~~~~~~d~R~~al~~---~s~~~L~~lGvw~~~~~~~~~~~~~ 82 (391)
T PRK08020 6 TEIAIVGGGMVGGALALGLAQHGFSVAVIEHAAPAPFVADSQPDVRISAISA---ASVALLKGLGVWDAVQAMRCHPYRR 82 (391)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEECH---HHHHHHHHCCCHHHHHHHCCCCEEE
T ss_conf 8489999369999999999866997899948998766655798733898788---9999999888848778625687148
Q ss_pred E---ECCC--CCCCHHH--------HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE--EEC-CCCCCCCCCCCCCCCCC
Q ss_conf 1---6477--5328999--------99999999998777778764004310110011--100-22210235752112322
Q gi|254781053|r 71 I---NIAS--CHLDLKK--------MMSYKKSIVESNTQGINFLLKKNKIITYHGSA--RIV-SNNKILVKGSSSEETIE 134 (466)
Q Consensus 71 ~---~~~~--~~~d~~~--------~~~~~~~~v~~~~~~~~~~~~~~~V~~~~g~a--~~~-~~~~v~V~~~~~~~~i~ 134 (466)
T Consensus 83 ~~~~~~~~~~~~f~~~~~~~~~lg~~v~~-~~l~~~L~~---~l~~~~~v~~~~~~~v~~i~~~~~~~~v~l~~g-~~i~ 157 (391)
T PRK08020 83 LETWEWETAHVVFDAAELKLPELGYMVEN-RVLQQALWQ---ALEAHPNVTLRVPASLIALHRHDDGWELELADG-ETIQ 157 (391)
T ss_pred EEEECCCCCEEEECHHHCCCCCCCCCCCH-HHHHHHHHH---HHHHCCCCEEEECCEEEEEEECCCEEEEEECCC-CEEE
T ss_conf 98612788558725443289754012126-999999999---998389969995880268897498689994899-9998
Q ss_pred CEEECCCCCCCC
Q ss_conf 100004676652
Q gi|254781053|r 135 AKNIVIATGSEA 146 (466)
Q Consensus 135 ad~iviATGs~p 146 (466)
T Consensus 158 a~lvIgADG~~S 169 (391)
T PRK08020 158 AKLVIGADGANS 169 (391)
T ss_pred ECEEEEECCCCC
T ss_conf 379999079970