HHsearch alignment for GI: 254781053 and conserved domain: PRK08020

>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed.
Probab=97.56  E-value=7.8e-06  Score=60.97  Aligned_cols=136  Identities=21%  Similarity=0.261  Sum_probs=68.5

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCC--E--------EEEEECCCCHHHHHHHHHHHHHHHHH-HHHC-C
Q ss_conf             319999898668999999998799399993799715--0--------25136673709899999999999986-6755-8
Q gi|254781053|r    3 YDVAVVGGGPAGYACAIKAAQLKNKVAIIEKEKTYG--G--------TCLNIGCIPSKALLHASEMYSHIAKE-AGDL-G   70 (466)
Q Consensus         3 YDvvIIG~G~AG~~aA~~~~~~G~~V~lIE~~~~~G--G--------tC~~~GCiPsK~l~~~a~~~~~~~~~-~~~~-g   70 (466)
T Consensus         6 ~DV~IvG~G~vGl~lAl~La~~G~~V~viE~~~~~~~~~~~~~d~R~~al~~---~s~~~L~~lGvw~~~~~~~~~~~~~   82 (391)
T PRK08020          6 TEIAIVGGGMVGGALALGLAQHGFSVAVIEHAAPAPFVADSQPDVRISAISA---ASVALLKGLGVWDAVQAMRCHPYRR   82 (391)
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEECH---HHHHHHHHCCCHHHHHHHCCCCEEE
T ss_conf             8489999369999999999866997899948998766655798733898788---9999999888848778625687148


Q ss_pred             E---ECCC--CCCCHHH--------HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE--EEC-CCCCCCCCCCCCCCCCC
Q ss_conf             1---6477--5328999--------99999999998777778764004310110011--100-22210235752112322
Q gi|254781053|r   71 I---NIAS--CHLDLKK--------MMSYKKSIVESNTQGINFLLKKNKIITYHGSA--RIV-SNNKILVKGSSSEETIE  134 (466)
Q Consensus        71 ~---~~~~--~~~d~~~--------~~~~~~~~v~~~~~~~~~~~~~~~V~~~~g~a--~~~-~~~~v~V~~~~~~~~i~  134 (466)
T Consensus        83 ~~~~~~~~~~~~f~~~~~~~~~lg~~v~~-~~l~~~L~~---~l~~~~~v~~~~~~~v~~i~~~~~~~~v~l~~g-~~i~  157 (391)
T PRK08020         83 LETWEWETAHVVFDAAELKLPELGYMVEN-RVLQQALWQ---ALEAHPNVTLRVPASLIALHRHDDGWELELADG-ETIQ  157 (391)
T ss_pred             EEEECCCCCEEEECHHHCCCCCCCCCCCH-HHHHHHHHH---HHHHCCCCEEEECCEEEEEEECCCEEEEEECCC-CEEE
T ss_conf             98612788558725443289754012126-999999999---998389969995880268897498689994899-9998


Q ss_pred             CEEECCCCCCCC
Q ss_conf             100004676652
Q gi|254781053|r  135 AKNIVIATGSEA  146 (466)
Q Consensus       135 ad~iviATGs~p  146 (466)
T Consensus       158 a~lvIgADG~~S  169 (391)
T PRK08020        158 AKLVIGADGANS  169 (391)
T ss_pred             ECEEEEECCCCC
T ss_conf             379999079970