HHsearch alignment for GI: 254781053 and conserved domain: PRK08948
>PRK08948 consensus.
Probab=98.17 E-value=1.2e-05 Score=59.60 Aligned_cols=54 Identities=13% Similarity=0.306 Sum_probs=39.5
Q ss_pred CCCCCCC-CCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEC
Q ss_conf 2222222-222232200234420146872169997213321100000232045312103
Q gi|254781053|r 221 CLKIMSK-QGMNFQLNSKVSSVKKVKGKAQVVYRSTDDEPINIEADAVLVAAGRRPYTK 278 (466)
Q Consensus 221 ~~~~l~~-~gV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vl~a~G~~Pn~~ 278 (466)
T Consensus 115 L~~~l~~~~~v~~~~~~~v~~i~~~~~~v~v~l~~--g--~~~~a~llVgaDG~~S~vR 169 (392)
T PRK08948 115 LFALLRKAPGVTLHCPARVANVARTQESVTVTLDN--G--ETLQGKLLVAADGSHSALA 169 (392)
T ss_pred HHHHHHHCCCCEEECCCEEEEEEECCCCEEEEECC--C--CEEEECEEEEECCCCHHHH
T ss_conf 99999758998785587689988558827999789--9--8998378999189973777