HHsearch alignment for GI: 254781053 and conserved domain: PRK11728
>PRK11728 hypothetical protein; Provisional.
Probab=99.14 E-value=4.5e-11 Score=99.09 Aligned_cols=196 Identities=18% Similarity=0.286 Sum_probs=98.0
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCC
Q ss_conf 933199998986689999999987--993999937997150251366737098999999999999866755816477532
Q gi|254781053|r 1 MVYDVAVVGGGPAGYACAIKAAQL--KNKVAIIEKEKTYGGTCLNIGCIPSKALLHASEMYSHIAKEAGDLGINIASCHL 78 (466)
Q Consensus 1 M~YDvvIIG~G~AG~~aA~~~~~~--G~~V~lIE~~~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~~g~~~~~~~~ 78 (466)
T Consensus 1 m~yDvvIIGgGIvG~siA~~Ls~~~~~~~V~vlEke~~~g~~-------~S~---rNSgviH--------aG~~y~p~s- 61 (400)
T PRK11728 1 MMYDFVIIGGGIVGLSTAMQLQDRYPGARIALLEKESGPARH-------QTG---HNSGVIH--------AGVYYTPGS- 61 (400)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC-------CCC---CCHHHCC--------CCCCCCCCC-
T ss_conf 953099999679999999999955999839999689997563-------353---2423215--------643589999-
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC-CCCCC-----C
Q ss_conf 89999999999999877777876400431011001110022210235752112322100004676652-44457-----6
Q gi|254781053|r 79 DLKKMMSYKKSIVESNTQGINFLLKKNKIITYHGSARIVSNNKILVKGSSSEETIEAKNIVIATGSEA-SGLPG-----M 152 (466)
Q Consensus 79 d~~~~~~~~~~~v~~~~~~~~~~~~~~~V~~~~g~a~~~~~~~v~V~~~~~~~~i~ad~iviATGs~p-~~iP~-----~ 152 (466)
T Consensus 62 -lka~------l~~~g~~l~~~~~~~~~i~~~-----------------------~~GkliVA~~~~e~~~L~~l~~~~~ 111 (400)
T PRK11728 62 -LKAR------FCRRGNEATKAFCDQHGIPYE-----------------------VCGKLLVATSELELERMEALYERAA 111 (400)
T ss_pred -HHHH------HHHHHHHHHHHHHHHCCCCCC-----------------------CCCEEEEECCHHHHHHHHHHHHHHH
T ss_conf -9999------999999999999998599921-----------------------1686999779999999999999998
Q ss_pred CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCC-CCCCCCCCCCCCCCCC
Q ss_conf 653210024530574111111333210123445433201322012201110000111221222-2112222222222222
Q gi|254781053|r 153 SIDFDEQVIVSSTGALSFSSVPKNLLVIGAGVIGLELGSVWTRLGSCVKIIEHSGTILNGMDK-EIAAHCLKIMSKQGMN 231 (466)
Q Consensus 153 ~~~~~~~~~~t~~~~~~l~~~P~~ivIIGgG~ig~E~A~~~~~lG~~Vtli~~~~~ll~~~d~-~~~~~~~~~l~~~gV~ 231 (466)
T Consensus 112 ~ngv-~~~~l~~~ei~~~e--P~-v~~~~a---------l~~----------p~tgi---vD~~~l~~al~~~a~~~G~~ 165 (400)
T PRK11728 112 ANGI-EVERLDAEELRERE--PN-IRGLGA---------IFV----------PSTGI---VDYRAVAEAMAELIQARGGE 165 (400)
T ss_pred HCCC-CEEEECHHHHHHHC--CC-CCCCCE---------EEC----------CCCEE---ECHHHHHHHHHHHHHHCCCE
T ss_conf 5698-62896799999868--86-543235---------976----------87727---78999999999999978989
Q ss_pred CCCCHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEE
Q ss_conf 32200234420146872169997213321100000232045312
Q gi|254781053|r 232 FQLNSKVSSVKKVKGKAQVVYRSTDDEPINIEADAVLVAAGRRP 275 (466)
Q Consensus 232 i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vl~a~G~~P 275 (466)
T Consensus 166 i~~~~~V~~i~~~~~~~~v~t--~~~--~~i~a~~vINaAGl~A 205 (400)
T PRK11728 166 IRLGAEVTALDEHANGVVVRT--SQG--GEFEARTLVNCAGLMS 205 (400)
T ss_pred EEECCEEEEEEEECCEEEEEE--CCC--CEEEEEEEEECCCHHH
T ss_conf 992788989999799999998--899--8899718998666528