HHsearch alignment for GI: 254781053 and conserved domain: PRK12416
>PRK12416 protoporphyrinogen oxidase; Provisional.
Probab=94.20 E-value=0.0079 Score=39.10 Aligned_cols=48 Identities=17% Similarity=0.280 Sum_probs=27.7
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCC
Q ss_conf 222222222222232200234420146872169997213321100000232045
Q gi|254781053|r 219 AHCLKIMSKQGMNFQLNSKVSSVKKVKGKAQVVYRSTDDEPINIEADAVLVAAG 272 (466)
Q Consensus 219 ~~~~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vl~a~G 272 (466)
T Consensus 230 ~aL~~~L~~~--~i~~~~~~~~i~~~~~~~~v~~~--~~--~~~~~d~VV~a~P 277 (466)
T PRK12416 230 DRLEEVLTET--VVKKGAVTTAVSKQGDRYEISFA--NH--ESIQADYVVLAAP 277 (466)
T ss_pred HHHHHHHCCC--EEECCCEEEEEEECCCCEEEEEC--CC--CEEEECEEEECCC
T ss_conf 9999873535--47848558889876995899957--99--8787366997688