HHsearch alignment for GI: 254781053 and conserved domain: PRK12769
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed.
Probab=99.97 E-value=6.8e-32 Score=250.67 Aligned_cols=276 Identities=25% Similarity=0.336 Sum_probs=188.3
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHH
Q ss_conf 19999898668999999998799399993799715025136673709899999999999986675581647753289999
Q gi|254781053|r 4 DVAVVGGGPAGYACAIKAAQLKNKVAIIEKEKTYGGTCLNIGCIPSKALLHASEMYSHIAKEAGDLGINIASCHLDLKKM 83 (466)
Q Consensus 4 DvvIIG~G~AG~~aA~~~~~~G~~V~lIE~~~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~~g~~~~~~~~d~~~~ 83 (466)
T Consensus 329 kVAIIGsGPAGLsaA~~Lar~G~~VTVFE~~~~~GGl--L~yGIP~--------------------------fRLpk--- 377 (654)
T PRK12769 329 RVAIIGAGPAGLACADVLTRNGVAVTVYDRHPEIGGL--LTFGIPA--------------------------FKLDK--- 377 (654)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCE--EEECCCC--------------------------CCCCH---
T ss_conf 8999897789999999999769757995257778866--7524862--------------------------22778---
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCC-CC--CCCCCCCCCCCEE
Q ss_conf 99999999987777787640043101100111002221023575211232210000467665-24--4457665321002
Q gi|254781053|r 84 MSYKKSIVESNTQGINFLLKKNKIITYHGSARIVSNNKILVKGSSSEETIEAKNIVIATGSE-AS--GLPGMSIDFDEQV 160 (466)
Q Consensus 84 ~~~~~~~v~~~~~~~~~~~~~~~V~~~~g~a~~~~~~~v~V~~~~~~~~i~ad~iviATGs~-p~--~iP~~~~~~~~~~ 160 (466)
T Consensus 378 -----~vv~~ei----~~l~~lGV~f~~n~~-V-G-kDitl~e----L~~~yDAVfla~Ga~~~r~l~IpGedl----~G 437 (654)
T PRK12769 378 -----SLLARRR----EIFSAMGIHFELNCE-V-G-KDISLES----LLEDYDAVFVGVGTYRSMKAGLPNEDA----PG 437 (654)
T ss_pred -----HHHHHHH----HHHHHCCCEEECCCE-E-C-CCCCHHH----HHHCCCEEEEECCCCCCCCCCCCCCCC----CC
T ss_conf -----9999999----999826988983717-6-8-7658999----973699899951788786699899778----88
Q ss_pred EEEECCCC--------CCC---C------CCCCCCCCCCCCCCCCCCHHHHHCCC-CHHHHHHCCCC-CCCCCCCCCCCC
Q ss_conf 45305741--------111---1------13332101234454332013220122-01110000111-221222211222
Q gi|254781053|r 161 IVSSTGAL--------SFS---S------VPKNLLVIGAGVIGLELGSVWTRLGS-CVKIIEHSGTI-LNGMDKEIAAHC 221 (466)
Q Consensus 161 ~~t~~~~~--------~l~---~------~P~~ivIIGgG~ig~E~A~~~~~lG~-~Vtli~~~~~l-l~~~d~~~~~~~ 221 (466)
T Consensus 438 V~~AleFL~~~~~~~~g~~~~~~~~~i~~~GK~VvVIGGGntAmDcaRtA~RlGA~~Vt~vYRR~~~eMPA~~~Ev---- 513 (654)
T PRK12769 438 VYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTAMDCVRTALRHGASNVTCAYRRDEANMPGSKKEV---- 513 (654)
T ss_pred CEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHH----
T ss_conf 3878888999888651775556667655557558998887246999999997599836604546723499875665----
Q ss_pred CCCCCCCCCCCCCCHHHHHHHCCCCC-CE-EEE---EE-------------ECCCCCCCEEEEEEECCCCEEEECCCCCE
Q ss_conf 22222222223220023442014687-21-699---97-------------21332110000023204531210367840
Q gi|254781053|r 222 LKIMSKQGMNFQLNSKVSSVKKVKGK-AQ-VVY---RS-------------TDDEPINIEADAVLVAAGRRPYTKGLGLE 283 (466)
Q Consensus 222 ~~~l~~~gV~i~~~~~v~~i~~~~~~-~~-v~~---~~-------------~~g~~~~i~~D~vl~a~G~~Pn~~~l~Le 283 (466)
T Consensus 514 -~~A~EEGV~f~~~~~P~ei~~de~G~V~gv~~~r~~lgepD~sGRr~p~~v~gse~~i~aD~VI~AiG~~p~~~~-~~~ 591 (654)
T PRK12769 514 -KNAREEGANFEFNVQPVALVLDEQGHVCGIRFLRTRLGEPDAQGRRRPVPIEGSEFVMPADAVIMAFGFNPHGMP-WLE 591 (654)
T ss_pred -HHHHHCCCEEEECCCCEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCEECCCCEEEEECCEEEECCCCCCCCCC-CCC
T ss_conf -578856878994468579997799729999999988556277787620564896699989999999889998875-322
Q ss_pred EEECCCCCCCCCCCCCC----CEEECCCCEEECCCCCCCCCCCEECCCCCCEEECCC
Q ss_conf 00012676422333776----333026848702433354344300012320120111
Q gi|254781053|r 284 EIGINIDHRGCIEIGGQ----FQTSISTIYAIGDVVRGPMLAHKAEDEGIAVAEIIS 336 (466)
Q Consensus 284 ~~gi~~~~~G~I~vd~~----~~Ts~p~IyA~GDv~g~~~l~~~A~~~g~~aa~~i~ 336 (466)
T Consensus 592 ~~gl~~~~~G~I~~d~~~~~~~~Ts~pgVFAgGD~v~G~stVV~Ai~~Gr~AA~aId 648 (654)
T PRK12769 592 SHGVTVDKWGRIIADVESQYRYQTSNPKIFAGGDAVRGADLVVTAMAEGRHAAQGII 648 (654)
T ss_pred CCCEEECCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 568137699988736777765448999989807856682899999999999999999