HHsearch alignment for GI: 254781053 and conserved domain: PRK12771

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional.
Probab=99.96  E-value=7.1e-30  Score=235.99  Aligned_cols=273  Identities=23%  Similarity=0.320  Sum_probs=182.8

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHH
Q ss_conf             19999898668999999998799399993799715025136673709899999999999986675581647753289999
Q gi|254781053|r    4 DVAVVGGGPAGYACAIKAAQLKNKVAIIEKEKTYGGTCLNIGCIPSKALLHASEMYSHIAKEAGDLGINIASCHLDLKKM   83 (466)
Q Consensus         4 DvvIIG~G~AG~~aA~~~~~~G~~V~lIE~~~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~~g~~~~~~~~d~~~~   83 (466)
T Consensus       139 kVAVIGaGPAGLsaA~~La~~G~~VtVfE~~~~~GGm-l~~-GIP~--------------------------yRLP~-~v  189 (560)
T PRK12771        139 RVAVIGGGPAGLSAAYQLRRLGHAVTIFEAGPKLGGM-MRY-GIPG--------------------------YRLPR-DV  189 (560)
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCE-EEC-CCCC--------------------------CCCCH-HH
T ss_conf             8999897789999999999769858996767888988-835-6875--------------------------44758-99


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCC-CC--CCCCCCCCCCCEE
Q ss_conf             99999999987777787640043101100111002221023575211232210000467665-24--4457665321002
Q gi|254781053|r   84 MSYKKSIVESNTQGINFLLKKNKIITYHGSARIVSNNKILVKGSSSEETIEAKNIVIATGSE-AS--GLPGMSIDFDEQV  160 (466)
Q Consensus        84 ~~~~~~~v~~~~~~~~~~~~~~~V~~~~g~a~~~~~~~v~V~~~~~~~~i~ad~iviATGs~-p~--~iP~~~~~~~~~~  160 (466)
T Consensus       190 -------l~~e---i~-~i~~~GV~~~~n~~-vg~d--it~~~----L~~~yDAV~la~Ga~~~r~l~i~G~d~----~g  247 (560)
T PRK12771        190 -------LDAE---IQ-RILDLGVEVKLGVR-VGED--ITLEQ----LEGDYDAVFVAIGAQLGKRLPIPGEDA----AN  247 (560)
T ss_pred             -------HHHH---HH-HHHHCCCEEEECCE-ECCC--CCHHH----HHCCCCEEEECCCCCCCCCCCCCCCCC----CC
T ss_conf             -------9999---99-99964967983878-4465--67999----717788899916878776089788776----55


Q ss_pred             EEEECCCCC------CCCCCCCCCCCCCCCCCCCCCHHHHHCCC-CHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             453057411------11113332101234454332013220122-01110000111-22122221122222222222223
Q gi|254781053|r  161 IVSSTGALS------FSSVPKNLLVIGAGVIGLELGSVWTRLGS-CVKIIEHSGTI-LNGMDKEIAAHCLKIMSKQGMNF  232 (466)
Q Consensus       161 ~~t~~~~~~------l~~~P~~ivIIGgG~ig~E~A~~~~~lG~-~Vtli~~~~~l-l~~~d~~~~~~~~~~l~~~gV~i  232 (466)
T Consensus       248 V~~al~fL~~~~~g~~~~~Gk~VvVIGGGntAmD~artA~RlGa~~V~ivyrr~~~~MpA~~~E----i~-~A~eEGV~~  322 (560)
T PRK12771        248 VLDAVSFLRAVEEGEPPKLGKRVVVIGGGNTAMDAARTARRLGAEEVVIVYRRTREEMPAHAFE----ID-DALREGVEI  322 (560)
T ss_pred             CEEHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHH----HH-HHHHCCCEE
T ss_conf             2405999999756897556886899899822899999999738976999831442028999899----98-787479568


Q ss_pred             CCCHHHHHHHCCCCCCE-EEEEE----------ECCCCCCCEEEEEEECCCCEEEECCCCCEE-EECCCCCCCCCCCC-C
Q ss_conf             22002344201468721-69997----------213321100000232045312103678400-00126764223337-7
Q gi|254781053|r  233 QLNSKVSSVKKVKGKAQ-VVYRS----------TDDEPINIEADAVLVAAGRRPYTKGLGLEE-IGINIDHRGCIEIG-G  299 (466)
Q Consensus       233 ~~~~~v~~i~~~~~~~~-v~~~~----------~~g~~~~i~~D~vl~a~G~~Pn~~~l~Le~-~gi~~~~~G~I~vd-~  299 (466)
T Consensus       323 ~~~~~p~~i~~~~g~v~gl~~~~~~~~e~g~~~~~g~~~~i~aD~VI~AiGq~~d~~~l--~~~~~~~~~-~g~i~~~~~  399 (560)
T PRK12771        323 NWLRTPVEVEKDEDGVTGLRVEKMELDEKGEPGPTGEFFTLEADMVVLAIGQDTDSEFL--EGLPGVRNG-RGGLVVDRN  399 (560)
T ss_pred             EECCCCEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCEEEECCEEEECCCCCCCCCHH--CCCCCEEEC-CCCEEECCC
T ss_conf             96346479980698598999999998899887889972675468999922578873000--236554717-998884787


Q ss_pred             CCEEECCCCEEECCCCCCCCCCCEECCCCCCEEECC
Q ss_conf             633302684870243335434430001232012011
Q gi|254781053|r  300 QFQTSISTIYAIGDVVRGPMLAHKAEDEGIAVAEII  335 (466)
Q Consensus       300 ~~~Ts~p~IyA~GDv~g~~~l~~~A~~~g~~aa~~i  335 (466)
T Consensus       400 ~~~Ts~~gVFa~GD~v~Gp~~vv~AI~~Gr~AA~~I  435 (560)
T PRK12771        400 FRMTGRPGVFAGGDMVPGERTVTTAVGHGKKAARHI  435 (560)
T ss_pred             CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             665799886743654668418999999999999999