HHsearch alignment for GI: 254781053 and conserved domain: PRK12809

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed.
Probab=99.97  E-value=4.2e-31  Score=244.92  Aligned_cols=277  Identities=23%  Similarity=0.306  Sum_probs=187.7

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHH
Q ss_conf             19999898668999999998799399993799715025136673709899999999999986675581647753289999
Q gi|254781053|r    4 DVAVVGGGPAGYACAIKAAQLKNKVAIIEKEKTYGGTCLNIGCIPSKALLHASEMYSHIAKEAGDLGINIASCHLDLKKM   83 (466)
Q Consensus         4 DvvIIG~G~AG~~aA~~~~~~G~~V~lIE~~~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~~g~~~~~~~~d~~~~   83 (466)
T Consensus       312 KVAVIGsGPAGLaaA~~Lar~G~~VTVfE~~~~~GGl--L~yGIP~--------------------------fRLPK---  360 (639)
T PRK12809        312 KVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGM--LTFGIPP--------------------------FKLDK---  360 (639)
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCE--EEECCCC--------------------------CCCCH---
T ss_conf             8999897589999999999759906999368888986--8535874--------------------------52777---


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCC-CC--CCCCCCCCCCCEE
Q ss_conf             99999999987777787640043101100111002221023575211232210000467665-24--4457665321002
Q gi|254781053|r   84 MSYKKSIVESNTQGINFLLKKNKIITYHGSARIVSNNKILVKGSSSEETIEAKNIVIATGSE-AS--GLPGMSIDFDEQV  160 (466)
Q Consensus        84 ~~~~~~~v~~~~~~~~~~~~~~~V~~~~g~a~~~~~~~v~V~~~~~~~~i~ad~iviATGs~-p~--~iP~~~~~~~~~~  160 (466)
T Consensus       361 -----~vv~rei----~~l~~lGV~f~~n~~--VG-kDit~~----eL~~~yDAVflg~Ga~~~~~l~IpGedl----~G  420 (639)
T PRK12809        361 -----TVLSQRR----EIFTAMGIDFHLNCE--IG-RDITFS----DLTSEYDAVFIGVGTYGMMRADLPHEDA----PG  420 (639)
T ss_pred             -----HHHHHHH----HHHHHCCCEEEECCE--EC-CCCCHH----HHHHHCCEEEEEECCCCCCCCCCCCCCC----CC
T ss_conf             -----8999999----999864988991967--79-868899----9973179899973678885489887778----78


Q ss_pred             EEEECCCCC-----------CCCC------CCCCCCCCCCCCCCCCCHHHHHCCC-CHHHHHHCCCC-CCCCCCCCCCCC
Q ss_conf             453057411-----------1111------3332101234454332013220122-01110000111-221222211222
Q gi|254781053|r  161 IVSSTGALS-----------FSSV------PKNLLVIGAGVIGLELGSVWTRLGS-CVKIIEHSGTI-LNGMDKEIAAHC  221 (466)
Q Consensus       161 ~~t~~~~~~-----------l~~~------P~~ivIIGgG~ig~E~A~~~~~lG~-~Vtli~~~~~l-l~~~d~~~~~~~  221 (466)
T Consensus       421 V~~AlefL~~~~~~~~g~~~~~~~p~~~~~GK~VVVIGGGntAmDcaRTA~RlGA~~VtivYRR~~~eMPA~~~E----v  496 (639)
T PRK12809        421 VIQALPFLTAHTRQLMGLPESEEYPLTDVEGKRVVVLGGGDTTMDCLRTSIRLNAASVTCAYRRDEVSMPGSRKE----V  496 (639)
T ss_pred             CEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEE----C
T ss_conf             387699999999864388644457754556777999899821899999999839987752154774579997003----0


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHCCCCC-CE-EEE---EE-------------ECCCCCCCEEEEEEECCCCEEEECCCCCE
Q ss_conf             22222222223220023442014687-21-699---97-------------21332110000023204531210367840
Q gi|254781053|r  222 LKIMSKQGMNFQLNSKVSSVKKVKGK-AQ-VVY---RS-------------TDDEPINIEADAVLVAAGRRPYTKGLGLE  283 (466)
Q Consensus       222 ~~~l~~~gV~i~~~~~v~~i~~~~~~-~~-v~~---~~-------------~~g~~~~i~~D~vl~a~G~~Pn~~~l~Le  283 (466)
T Consensus       497 -~~A~EEGV~f~~~~~P~~i~~de~G~V~gv~~vr~~lgepd~~GRr~p~~i~Gse~~i~aD~VI~AiG~~~~~~~-~~~  574 (639)
T PRK12809        497 -VNAREEGVEFQFNVQPQYIACDEDGRLTAVGLIRTAMGEPGPDGRRRPRPVAGSEFELPADVLIMAFGFQAHAMP-WLQ  574 (639)
T ss_pred             -CCHHHCCEEEECCCCCEEEEECCCCEEEEEEEEEEEECCCCCCCCEEEEEECCCEEEEECCEEEECCCCCCCCCC-CCC
T ss_conf             -101218738982788579996798639999999999567588888734760893699989999998878998875-334


Q ss_pred             EEECCCCCCCCCCCCCC----CEEECCCCEEECCCCCCCCCCCEECCCCCCEEECCCC
Q ss_conf             00012676422333776----3330268487024333543443000123201201112
Q gi|254781053|r  284 EIGINIDHRGCIEIGGQ----FQTSISTIYAIGDVVRGPMLAHKAEDEGIAVAEIISG  337 (466)
Q Consensus       284 ~~gi~~~~~G~I~vd~~----~~Ts~p~IyA~GDv~g~~~l~~~A~~~g~~aa~~i~~  337 (466)
T Consensus       575 ~~giel~~~G~I~~~~~~~~~~qTs~~gVFAgGD~v~G~stVV~AI~~Gr~AA~sI~~  632 (639)
T PRK12809        575 GSGIKLDKWGLIQTGDVGYLPTQTHLKKVFAGGDAVHGADLVVTAMAAGRQAARDMLT  632 (639)
T ss_pred             CCCEEECCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             6785588999886178777676689999998278786736999999999999999999