HHsearch alignment for GI: 254781053 and conserved domain: PRK12809
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed.
Probab=99.97 E-value=4.2e-31 Score=244.92 Aligned_cols=277 Identities=23% Similarity=0.306 Sum_probs=187.7
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHH
Q ss_conf 19999898668999999998799399993799715025136673709899999999999986675581647753289999
Q gi|254781053|r 4 DVAVVGGGPAGYACAIKAAQLKNKVAIIEKEKTYGGTCLNIGCIPSKALLHASEMYSHIAKEAGDLGINIASCHLDLKKM 83 (466)
Q Consensus 4 DvvIIG~G~AG~~aA~~~~~~G~~V~lIE~~~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~~g~~~~~~~~d~~~~ 83 (466)
T Consensus 312 KVAVIGsGPAGLaaA~~Lar~G~~VTVfE~~~~~GGl--L~yGIP~--------------------------fRLPK--- 360 (639)
T PRK12809 312 KVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGM--LTFGIPP--------------------------FKLDK--- 360 (639)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCE--EEECCCC--------------------------CCCCH---
T ss_conf 8999897589999999999759906999368888986--8535874--------------------------52777---
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCC-CC--CCCCCCCCCCCEE
Q ss_conf 99999999987777787640043101100111002221023575211232210000467665-24--4457665321002
Q gi|254781053|r 84 MSYKKSIVESNTQGINFLLKKNKIITYHGSARIVSNNKILVKGSSSEETIEAKNIVIATGSE-AS--GLPGMSIDFDEQV 160 (466)
Q Consensus 84 ~~~~~~~v~~~~~~~~~~~~~~~V~~~~g~a~~~~~~~v~V~~~~~~~~i~ad~iviATGs~-p~--~iP~~~~~~~~~~ 160 (466)
T Consensus 361 -----~vv~rei----~~l~~lGV~f~~n~~--VG-kDit~~----eL~~~yDAVflg~Ga~~~~~l~IpGedl----~G 420 (639)
T PRK12809 361 -----TVLSQRR----EIFTAMGIDFHLNCE--IG-RDITFS----DLTSEYDAVFIGVGTYGMMRADLPHEDA----PG 420 (639)
T ss_pred -----HHHHHHH----HHHHHCCCEEEECCE--EC-CCCCHH----HHHHHCCEEEEEECCCCCCCCCCCCCCC----CC
T ss_conf -----8999999----999864988991967--79-868899----9973179899973678885489887778----78
Q ss_pred EEEECCCCC-----------CCCC------CCCCCCCCCCCCCCCCCHHHHHCCC-CHHHHHHCCCC-CCCCCCCCCCCC
Q ss_conf 453057411-----------1111------3332101234454332013220122-01110000111-221222211222
Q gi|254781053|r 161 IVSSTGALS-----------FSSV------PKNLLVIGAGVIGLELGSVWTRLGS-CVKIIEHSGTI-LNGMDKEIAAHC 221 (466)
Q Consensus 161 ~~t~~~~~~-----------l~~~------P~~ivIIGgG~ig~E~A~~~~~lG~-~Vtli~~~~~l-l~~~d~~~~~~~ 221 (466)
T Consensus 421 V~~AlefL~~~~~~~~g~~~~~~~p~~~~~GK~VVVIGGGntAmDcaRTA~RlGA~~VtivYRR~~~eMPA~~~E----v 496 (639)
T PRK12809 421 VIQALPFLTAHTRQLMGLPESEEYPLTDVEGKRVVVLGGGDTTMDCLRTSIRLNAASVTCAYRRDEVSMPGSRKE----V 496 (639)
T ss_pred CEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEE----C
T ss_conf 387699999999864388644457754556777999899821899999999839987752154774579997003----0
Q ss_pred CCCCCCCCCCCCCCHHHHHHHCCCCC-CE-EEE---EE-------------ECCCCCCCEEEEEEECCCCEEEECCCCCE
Q ss_conf 22222222223220023442014687-21-699---97-------------21332110000023204531210367840
Q gi|254781053|r 222 LKIMSKQGMNFQLNSKVSSVKKVKGK-AQ-VVY---RS-------------TDDEPINIEADAVLVAAGRRPYTKGLGLE 283 (466)
Q Consensus 222 ~~~l~~~gV~i~~~~~v~~i~~~~~~-~~-v~~---~~-------------~~g~~~~i~~D~vl~a~G~~Pn~~~l~Le 283 (466)
T Consensus 497 -~~A~EEGV~f~~~~~P~~i~~de~G~V~gv~~vr~~lgepd~~GRr~p~~i~Gse~~i~aD~VI~AiG~~~~~~~-~~~ 574 (639)
T PRK12809 497 -VNAREEGVEFQFNVQPQYIACDEDGRLTAVGLIRTAMGEPGPDGRRRPRPVAGSEFELPADVLIMAFGFQAHAMP-WLQ 574 (639)
T ss_pred -CCHHHCCEEEECCCCCEEEEECCCCEEEEEEEEEEEECCCCCCCCEEEEEECCCEEEEECCEEEECCCCCCCCCC-CCC
T ss_conf -101218738982788579996798639999999999567588888734760893699989999998878998875-334
Q ss_pred EEECCCCCCCCCCCCCC----CEEECCCCEEECCCCCCCCCCCEECCCCCCEEECCCC
Q ss_conf 00012676422333776----3330268487024333543443000123201201112
Q gi|254781053|r 284 EIGINIDHRGCIEIGGQ----FQTSISTIYAIGDVVRGPMLAHKAEDEGIAVAEIISG 337 (466)
Q Consensus 284 ~~gi~~~~~G~I~vd~~----~~Ts~p~IyA~GDv~g~~~l~~~A~~~g~~aa~~i~~ 337 (466)
T Consensus 575 ~~giel~~~G~I~~~~~~~~~~qTs~~gVFAgGD~v~G~stVV~AI~~Gr~AA~sI~~ 632 (639)
T PRK12809 575 GSGIKLDKWGLIQTGDVGYLPTQTHLKKVFAGGDAVHGADLVVTAMAAGRQAARDMLT 632 (639)
T ss_pred CCCEEECCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 6785588999886178777676689999998278786736999999999999999999