HHsearch alignment for GI: 254781053 and conserved domain: PRK12810
>PRK12810 gltD glutamate synthase subunit beta; Reviewed.
Probab=98.23 E-value=8.3e-08 Score=75.32 Aligned_cols=90 Identities=26% Similarity=0.482 Sum_probs=66.3
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCC-------C--CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
Q ss_conf 33321012344543320132201220111000011122-------1--22221122222222222223220023442014
Q gi|254781053|r 174 PKNLLVIGAGVIGLELGSVWTRLGSCVKIIEHSGTILN-------G--MDKEIAAHCLKIMSKQGMNFQLNSKVSSVKKV 244 (466)
Q Consensus 174 P~~ivIIGgG~ig~E~A~~~~~lG~~Vtli~~~~~ll~-------~--~d~~~~~~~~~~l~~~gV~i~~~~~v~~i~~~ 244 (466)
T Consensus 143 gkkVAVIGsGPAGLsaA~~Lar~G~~VtVfE~~~~~GGll~yGIP~~RLpk~v~~~ei~~l~~~GV~~~~n~~VG~---- 218 (472)
T PRK12810 143 GKKVAVVGSGPAGLAAADQLARAGHKVTVFERDDRIGGLLRYGIPDFKLEKDVIDRRIELMEGEGIEFRTGVEVGK---- 218 (472)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECEECCC----
T ss_conf 9989998977899999999986697589972577777546531788555358999999999857978990523187----
Q ss_pred CCCCEEEEEEECCCCCCCEEEEEEECCCC-EEE
Q ss_conf 68721699972133211000002320453-121
Q gi|254781053|r 245 KGKAQVVYRSTDDEPINIEADAVLVAAGR-RPY 276 (466)
Q Consensus 245 ~~~~~v~~~~~~g~~~~i~~D~vl~a~G~-~Pn 276 (466)
T Consensus 219 d----it~-----~~L~~~yDAV~la~Ga~~~r 242 (472)
T PRK12810 219 D----ITA-----EQLLAEYDAVFLGGGAYKPR 242 (472)
T ss_pred C----CCH-----HHHHCCCCEEEEECCCCCCC
T ss_conf 5----769-----99850579899903778785