HHsearch alignment for GI: 254781053 and conserved domain: TIGR01816

>TIGR01816 sdhA_forward succinate dehydrogenase, flavoprotein subunit; InterPro: IPR011281 Succinate dehydrogenase and fumarate reductase are homologous enzymes reversible in principle but favoured under different circumstances. This entry represents a narrowly defined clade of the succinate dehydrogenase flavoprotein subunit as found in mitochondria, in Rickettsia, in Escherichia coli and other proteobacteria, and in a few other lineages. However, excluded are all known fumarate reductases. It also excludes putative succinate dehydrogenases that appear to diverged before the split between E. coli succinate dehydrogenase and fumarate reductase.; GO: 0016627 oxidoreductase activity acting on the CH-CH group of donors, 0050660 FAD binding, 0006099 tricarboxylic acid cycle.
Probab=97.91  E-value=1.2e-05  Score=59.54  Aligned_cols=32  Identities=34%  Similarity=0.548  Sum_probs=30.9

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             33199998986689999999987993999937
Q gi|254781053|r    2 VYDVAVVGGGPAGYACAIKAAQLKNKVAIIEK   33 (466)
Q Consensus         2 ~YDvvIIG~G~AG~~aA~~~~~~G~~V~lIE~   33 (466)
T Consensus         2 ~fDvviVGaGGAGlRaAl~la~~G~~tAv~tK   33 (615)
T TIGR01816         2 KFDVVIVGAGGAGLRAALQLAKGGLNTAVVTK   33 (615)
T ss_pred             CCCEEEECCCCHHHHHHHHHHHCCCEEEEEEC
T ss_conf             42279886875689999986327923889831