HHsearch alignment for GI: 254781053 and conserved domain: TIGR02023
>TIGR02023 BchP-ChlP geranylgeranyl reductase; InterPro: IPR010253 This entry represents a group of geranylgeranyl reductases specific for the biosyntheses of bacteriochlorophyll and chlorophyll . It is unclear whether the processes of isoprenoid ligation to the chlorin ring and reduction of the geranylgeranyl chain to a phytyl chain are necessarily ordered the same way in all species (see introduction to ).; GO: 0045550 geranylgeranyl reductase activity, 0015979 photosynthesis, 0015995 chlorophyll biosynthetic process.
Probab=95.46 E-value=0.011 Score=38.18 Aligned_cols=52 Identities=23% Similarity=0.372 Sum_probs=24.2
Q ss_pred CCCCCCCCCCCHHHHHHHCCCC----CCEEEEEEEC------CCCCCCEEEEEEECCCCEEEE
Q ss_conf 2222222322002344201468----7216999721------332110000023204531210
Q gi|254781053|r 225 MSKQGMNFQLNSKVSSVKKVKG----KAQVVYRSTD------DEPINIEADAVLVAAGRRPYT 277 (466)
Q Consensus 225 l~~~gV~i~~~~~v~~i~~~~~----~~~v~~~~~~------g~~~~i~~D~vl~a~G~~Pn~ 277 (466)
T Consensus 106 A~kaGAe~~~g-~f~~~~~d~~GWds~~~~~~~~~~G~k~ag~~~~~v~~~~VIGADGA~S~v 167 (408)
T TIGR02023 106 AQKAGAELIEG-LFKKLERDEDGWDSRVTLQYREKDGKKEAGEEKKSVEADVVIGADGANSKV 167 (408)
T ss_pred HHHHHHHHHHH-HHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCHH
T ss_conf 87621476656-755201567777552589987677751256777737898876044788658