HHsearch alignment for GI: 254781053 and conserved domain: TIGR02730

>TIGR02730 carot_isom carotene isomerase; InterPro: IPR014101 Members of this family, including sll0033 (crtH) of Synechocystis sp. (strain PCC 6803), catalyse a cis-trans isomerization of carotenes to the all-trans lycopene, a reaction that can also occur non-enzymatically in light through photoisomerization..

Probab=97.19  E-value=0.00042  Score=48.40  Aligned_cols=37  Identities=35%  Similarity=0.533  Sum_probs=33.4

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCE
Q ss_conf             3199998986689999999987993999937997150
Q gi|254781053|r    3 YDVAVVGGGPAGYACAIKAAQLKNKVAIIEKEKTYGG   39 (466)
Q Consensus         3 YDvvIIG~G~AG~~aA~~~~~~G~~V~lIE~~~~~GG   39 (466)
T Consensus         1 yDaiVIGSGIGGLVtAtQLa~KGakvLVLE~Y~IPGG   37 (506)
T TIGR02730         1 YDAIVIGSGIGGLVTATQLAAKGAKVLVLERYLIPGG   37 (506)
T ss_pred             CCEEEEECCCHHHHHHHHHHHCCCEEEEEEEEECCCC
T ss_conf             9478981683178999999854622553220114788